Citrus Sinensis ID: 020476
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | 2.2.26 [Sep-21-2011] | |||||||
| P73467 | 307 | Epimerase family protein | N/A | no | 0.916 | 0.970 | 0.498 | 1e-78 | |
| P77775 | 297 | Epimerase family protein | N/A | no | 0.904 | 0.989 | 0.408 | 1e-57 | |
| O31574 | 303 | Epimerase family protein | yes | no | 0.910 | 0.976 | 0.351 | 1e-46 | |
| P71373 | 296 | Epimerase family protein | yes | no | 0.889 | 0.976 | 0.359 | 4e-45 | |
| Q5M8N4 | 308 | Epimerase family protein | yes | no | 0.873 | 0.922 | 0.343 | 1e-44 | |
| O32960 | 307 | Epimerase family protein | yes | no | 0.901 | 0.954 | 0.355 | 4e-44 | |
| Q17QH8 | 294 | Epimerase family protein | yes | no | 0.886 | 0.979 | 0.347 | 5e-44 | |
| Q4L4J7 | 299 | Epimerase family protein | yes | no | 0.886 | 0.963 | 0.338 | 1e-42 | |
| Q8CPY7 | 299 | Epimerase family protein | yes | no | 0.876 | 0.953 | 0.338 | 9e-42 | |
| Q5HQV8 | 299 | Epimerase family protein | yes | no | 0.876 | 0.953 | 0.338 | 9e-42 |
| >sp|P73467|Y1223_SYNY3 Epimerase family protein slr1223 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) GN=slr1223 PE=3 SV=2 | Back alignment and function desciption |
|---|
Score = 293 bits (750), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 155/311 (49%), Positives = 207/311 (66%), Gaps = 13/311 (4%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGV-MIAEEP 78
M + +TGATGF+G LV L H++ +L RS SKA+ +F PG FP + IA E
Sbjct: 1 MKIILTGATGFVGCSLVPLLHQQGHELTLLVRSVSKAQRLFAPGS----FPQLKAIAYEA 56
Query: 79 ----QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 134
W+ + G AV+NLAG PI RW+ K EI +SR T K+V+ I ++ +P
Sbjct: 57 TKSGDWQKVVDGQDAVINLAGEPISERWTEAYKAEIFDSRKLGTEKLVEAIAKADR--KP 114
Query: 135 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 193
V++S +A+GYYGTSET F ESS G+D+LAEVC+ WE A +V + VRL + RIGIV
Sbjct: 115 QVMISGSAIGYYGTSETATFTESSKPGDDFLAEVCQAWENAAHQVEQLGVRLVVFRIGIV 174
Query: 194 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 253
LG DGGALAKM+P F +FAGGPLGSG+QWFSWI D++ LI +AL++ + RG N TAP
Sbjct: 175 LGADGGALAKMLPPFKLFAGGPLGSGEQWFSWIDRRDLIALIDKALTDSTLRGTYNATAP 234
Query: 254 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 313
NPV++ E C LG VL RPSWLPVP+ AL+ +LGEGA +VLEGQ V+P + F F+
Sbjct: 235 NPVKMKEFCHTLGKVLARPSWLPVPDIALELLLGEGAKLVLEGQEVLPGAISKTDFQFQA 294
Query: 314 RYVKDALKAIM 324
++ +L+ I+
Sbjct: 295 PDLETSLRQIL 305
|
Synechocystis sp. (strain PCC 6803 / Kazusa) (taxid: 1111708) |
| >sp|P77775|YFCH_ECOLI Epimerase family protein YfcH OS=Escherichia coli (strain K12) GN=yfcH PE=3 SV=1 | Back alignment and function description |
|---|
Score = 223 bits (569), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 125/306 (40%), Positives = 182/306 (59%), Gaps = 12/306 (3%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TG TG IGR L+ RL HQ+ V+TR+ KA + G + + G +A++
Sbjct: 1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56
Query: 81 RDCIQGSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ G AV+NLAG PI RW+ E K+ + +SR +T K+VDLIN S PSVL+S
Sbjct: 57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINAS--DTPPSVLIS 111
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 198
+A GYYG V E P N++ ++C WE A + D R+ L+R G+VL DG
Sbjct: 112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
G L KM+P F + GGP+GSG+Q+ +WIH+DD+VN I L N RG N +P PVR
Sbjct: 172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
+ LG+ L RP+ L VP A++ ++GE + +VL GQR +P R +E GF F++ +++
Sbjct: 231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290
Query: 319 ALKAIM 324
AL ++
Sbjct: 291 ALADVV 296
|
Escherichia coli (strain K12) (taxid: 83333) |
| >sp|O31574|YFHF_BACSU Epimerase family protein YfhF OS=Bacillus subtilis (strain 168) GN=yfhF PE=3 SV=1 | Back alignment and function description |
|---|
Score = 187 bits (474), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/307 (35%), Positives = 164/307 (53%), Gaps = 11/307 (3%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M +++TG TGF+G+ L L H V +L+R+ + E K + + P+
Sbjct: 1 MNIAMTGGTGFLGQHLTGVLTRQGHHVYILSRNARETE----QKNMTYVQWLSEGAAPE- 55
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+ +NLAG I RW+ + K+ I SRI T +V LI + E +P L+ A
Sbjct: 56 -QELPHIDVWINLAGKSIFGRWTEKTKQHILSSRINATREVQRLIQKQKE--KPKTLIQA 112
Query: 141 TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDG 198
+A+G YGTS + F E S+ S D+L+ WE + +R R G++LG +
Sbjct: 113 SAVGIYGTSLEKTFTEDSATSDEDFLSHTAHLWEKEGQHIEAMGIRTVYARFGVMLG-EK 171
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
GAL MI + AGG +G+G+QW SWIH++D +I A+ N G +N TAPNPV +
Sbjct: 172 GALPLMILPYKFLAGGTIGTGRQWLSWIHVEDAAQMIRYAVENAGISGPMNVTAPNPVDM 231
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
+ + V RP WLPVPEF L LGE + ++++GQR +P +A GF F Y ++
Sbjct: 232 KQFGKTIARVKHRPHWLPVPEFFLSKALGEMSLLIVKGQRALPKKAITSGFRFTYSDLEF 291
Query: 319 ALKAIMS 325
AL +++
Sbjct: 292 ALSQLIA 298
|
Bacillus subtilis (strain 168) (taxid: 224308) |
| >sp|P71373|Y1208_HAEIN Epimerase family protein HI_1208 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=HI_1208 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 182 bits (461), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/306 (35%), Positives = 170/306 (55%), Gaps = 17/306 (5%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TG TG IG+ LV+RL N QV +LTRS S L K +F + +
Sbjct: 1 MNILLTGGTGLIGKALVERLCLRNEQVTILTRSSSPHTLS-KHKNIKFITALSQLNSQEQ 59
Query: 81 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D A++NLAG PI + WS K ++ESR+ +T+++V+ IN+ + + +S
Sbjct: 60 FD------AIINLAGEPIFHKVWSKNQKSILRESRLSLTTQLVEFINQYQQH---PIFIS 110
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 199
+A G YG + + E+S + + A++C++WE A + N R+ LIR G+V GG
Sbjct: 111 GSATGIYGDQDEQKITETSKTAKTFTAQLCQDWENIAQQANG--RVCLIRTGMVFSTKGG 168
Query: 200 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259
ALAK++P + GG LG G+Q+F WI L+D+VN I L + RG N AP ++
Sbjct: 169 ALAKILPFYKWGLGGKLGKGEQYFPWIALEDMVNGILFLLDHSECRGAFNFAAPKSIKQH 228
Query: 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY----RY 315
+ L +L RP++ +P++ L +LGE A ++LE Q VVP + GF F+Y Y
Sbjct: 229 KFNRTLAQLLKRPAFATIPKWLLHFILGERANLLLESQNVVPEKLLNAGFQFQYADCENY 288
Query: 316 VKDALK 321
++D LK
Sbjct: 289 LEDILK 294
|
Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421) |
| >sp|Q5M8N4|D39U1_MOUSE Epimerase family protein SDR39U1 OS=Mus musculus GN=Sdr39u1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 180 bits (456), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 168/314 (53%), Gaps = 30/314 (9%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M V V G TGFIG + Q L+ H+V++++R PG+ T W
Sbjct: 1 MRVLVGGGTGFIGTAVTQLLRGRGHEVKLVSRQPG------PGRIT-------------W 41
Query: 81 RDCIQGS----TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
+ + V+NLAG I RW+ +KE+ SR+ T + I E+
Sbjct: 42 SELSESGLPLCDVVINLAGENILNPLRRWNETFQKEVLTSRLDTTHLLAKAITETAH--P 99
Query: 134 PSVLVSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGI 192
P + T + YY S T+ +DE SP GN D+ + + +WE A + R ++R G+
Sbjct: 100 PQAWILVTGVAYYQPSLTKEYDEDSPGGNFDFFSNLVTKWEAAARLPGESTRQVVVRSGV 159
Query: 193 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 252
VLG+ GGA++ M+ F + GGP+GSG+Q+F WIH+ D+ ++ AL +GV+NG A
Sbjct: 160 VLGRGGGAISHMLLPFRLGLGGPIGSGRQFFPWIHIGDLAGILNYALEANHVQGVLNGVA 219
Query: 253 P-NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 311
P + AE LG LGRP+++PVP ++AV GE A ++LEGQ+VVP R G+ +
Sbjct: 220 PASTTTNAEFAQALGAALGRPAFIPVPSTVVRAVFGERAIMLLEGQKVVPRRTLATGYQY 279
Query: 312 KYRYVKDALKAIMS 325
+ ++ ALK +++
Sbjct: 280 SFPELRAALKDVVA 293
|
Mus musculus (taxid: 10090) |
| >sp|O32960|Y860_MYCLE Epimerase family protein ML0860 OS=Mycobacterium leprae (strain TN) GN=ML0860 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 174/312 (55%), Gaps = 19/312 (6%)
Query: 15 LLQAS-QMTVSVTGATGFIGRRLVQRLQADNHQV-RVLTRSRSKAELIFPGKKTRFFPGV 72
+ QAS + V++ G++G IG L L+A++H V R++ R+ + AE + ++ F
Sbjct: 1 MAQASRKAVVAIAGSSGMIGSALAAALRANDHLVLRIVRRTPANAEELHWNPESGEFD-- 58
Query: 73 MIAEEPQWRDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEG 131
D I AVVNL G +G R WS K+ +++SRI T + + E+ G
Sbjct: 59 --------TDAITDVDAVVNLCGVNLGQRRWSGSFKQNLRDSRITPTEVLSAAVAEA--G 108
Query: 132 VRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-KDVRLALIRI 190
V+ ++A+A+GYYG + V DE+ +G +LA++C++WEG L R+ L R
Sbjct: 109 VK--TFINASAVGYYGNTRDRVVDENDRAGTGFLAQLCQDWEGATLPAQYAGTRVILART 166
Query: 191 GIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250
G+VL ++ G L++M PLF G +G+G+Q+ SWI L+D V + A+S+ S G +N
Sbjct: 167 GMVLAQEAGVLSRMRPLFSFALGARIGNGRQYMSWISLEDEVRALLFAISHQSLSGPLNL 226
Query: 251 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAKELGF 309
T P PV AE G + RP+ L +P FA++A LGE A +L GQR +PA + GF
Sbjct: 227 TGPAPVTNAEFTTAFGRAINRPTPLMLPSFAVRAALGEFADEGLLIGQRAIPAALERAGF 286
Query: 310 PFKYRYVKDALK 321
F + + +AL
Sbjct: 287 QFHHNTIGEALS 298
|
Mycobacterium leprae (taxid: 1769) |
| >sp|Q17QH8|D39U1_BOVIN Epimerase family protein SDR39U1 OS=Bos taurus GN=SDR39U1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 178 bits (451), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 164/311 (52%), Gaps = 23/311 (7%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M V V G TGFIG L Q L+A H+V +++R + + T P
Sbjct: 1 MRVLVGGGTGFIGTALTQLLKARGHEVTLISRKPGPDRITWDDLTTSGLP---------- 50
Query: 81 RDCIQGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
C A VNLAG I RW++ +KE+ SR+ T + I ++P+ P
Sbjct: 51 -RC----DAAVNLAGENILNPLRRWNAAFQKEVLSSRLETTQTLARAIAKAPQ--PPQAW 103
Query: 138 VSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
V T + YY S T +DE SP G+ D+ + + +WE A R ++R G+VLG+
Sbjct: 104 VLVTGVAYYQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGR 163
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP-NP 255
GGA+ M+ F + GGP+GSG Q+F WIH+ D+ ++ AL +G++NG AP +
Sbjct: 164 GGGAIGHMLLPFRLGLGGPIGSGHQFFPWIHIRDLAGILAHALETSHVQGILNGVAPASS 223
Query: 256 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYR 314
AE LG LGRP+++P+P ++AV G E A ++LEGQ+VVP R G+ + +
Sbjct: 224 TTNAEFARALGTALGRPAFIPLPSAVVQAVFGRERAVMLLEGQKVVPRRTLAAGYRYSFP 283
Query: 315 YVKDALKAIMS 325
+ ALK +++
Sbjct: 284 ELGAALKEVIA 294
|
Bos taurus (taxid: 9913) |
| >sp|Q4L4J7|Y2119_STAHJ Epimerase family protein SH2119 OS=Staphylococcus haemolyticus (strain JCSC1435) GN=SH2119 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 173 bits (439), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 103/304 (33%), Positives = 158/304 (51%), Gaps = 16/304 (5%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 82
+TG TG +G +LV +L+ + + +LTRS +++ P + + W
Sbjct: 6 ITGGTGMVGSQLVNKLKNRDVHITILTRSDKQSDD----------PKISYVNWSKDGWMS 55
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+ VVNLAG + RW+ K+ I SRI+ T +VDL ++ +P VL +A+A
Sbjct: 56 QVPDIDVVVNLAGATLNKRWTPSYKQLIMTSRIQSTQSLVDLFSQREH--KPEVLFNASA 113
Query: 143 LGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGA 200
+GYY S + E + D+L++V +WE A + R+ L R ++L DGGA
Sbjct: 114 MGYYPPSLYHTYTEKYQTHPFDFLSDVVYQWERFAKRFESFGTRVVLGRFSMILSNDGGA 173
Query: 201 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 260
L M + F GG LGSG QW+SWIH++D+V I + NP+ +G N AP R
Sbjct: 174 LQTMKLPYKFFVGGKLGSGFQWYSWIHINDLVRAILFTIDNPNAKGPFNMAAPIAERQNL 233
Query: 261 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320
L V+ RP VP F ++ LGE + VVL+ Q+V+P + LGF F Y +K A
Sbjct: 234 FGYTLARVMHRPHETWVPSFLMRLALGEMSTVVLDTQKVLPNKLDALGFTFNYSNLKIAF 293
Query: 321 KAIM 324
+ ++
Sbjct: 294 EDLI 297
|
Staphylococcus haemolyticus (strain JCSC1435) (taxid: 279808) |
| >sp|Q8CPY7|Y553_STAES Epimerase family protein SE_0553 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_0553 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 82
+TG TG +G LV ++ + + +LTR KT P + + W+
Sbjct: 6 ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+ V+NLAG + RW+S K+ + SRI+ T + +L E+ E +P VL +A+A
Sbjct: 56 QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113
Query: 143 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 197
+GYY TS TE++ + P D+L+E+ +WE A K + R+ L R G++L D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GGAL M + ++ GG LGSG+QW+SWIH+DD++ I +++ + G N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
L + +P P+ L+AVLG+ + V+L+ Q+V+P + LGF FKY ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290
Query: 318 DALKAIM 324
+AL ++
Sbjct: 291 NALDDLI 297
|
Staphylococcus epidermidis (strain ATCC 12228) (taxid: 176280) |
| >sp|Q5HQV8|Y438_STAEQ Epimerase family protein SERP0438 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP0438 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 171 bits (432), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 104/307 (33%), Positives = 167/307 (54%), Gaps = 22/307 (7%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ--WRD 82
+TG TG +G LV ++ + + +LTR KT P + + W+
Sbjct: 6 ITGGTGMVGSHLVNEIKQTDAHITILTRQ----------DKTSNHPKITYINWSKEGWQH 55
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+ V+NLAG + RW+S K+ + SRI+ T + +L E+ E +P VL +A+A
Sbjct: 56 QVPDIDIVINLAGATLNKRWTSSHKQAMMLSRIQSTQTLFELF-ETREH-KPEVLFNASA 113
Query: 143 LGYYG----TSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 197
+GYY TS TE++ + P D+L+E+ +WE A K + R+ L R G++L D
Sbjct: 114 MGYYPPDLFTSYTELY-RTLPF--DFLSEIVYQWERFANKFKQFGTRVVLGRFGLILSDD 170
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GGAL M + ++ GG LGSG+QW+SWIH+DD++ I +++ + G N TAP P R
Sbjct: 171 GGALEMMELPYRLYVGGKLGSGRQWYSWIHIDDLIRGILFTINHDNAEGPFNLTAPIPER 230
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
L + +P P+ L+AVLG+ + V+L+ Q+V+P + LGF FKY ++
Sbjct: 231 QNLFGYTLARAMHKPHETWAPKLILRAVLGQMSTVILDTQKVLPNKLHALGFEFKYNNLR 290
Query: 318 DALKAIM 324
+AL ++
Sbjct: 291 NALDDLI 297
|
Staphylococcus epidermidis (strain ATCC 35984 / RP62A) (taxid: 176279) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | ||||||
| 224105291 | 350 | predicted protein [Populus trichocarpa] | 0.966 | 0.897 | 0.823 | 1e-152 | |
| 255543879 | 351 | conserved hypothetical protein [Ricinus | 0.938 | 0.868 | 0.840 | 1e-150 | |
| 18399648 | 347 | Rossmann-fold NAD(P)-binding domain-cont | 0.963 | 0.902 | 0.800 | 1e-148 | |
| 357473587 | 350 | hypothetical protein MTR_4g072040 [Medic | 0.956 | 0.888 | 0.807 | 1e-147 | |
| 297824979 | 350 | hypothetical protein ARALYDRAFT_900542 [ | 0.966 | 0.897 | 0.788 | 1e-146 | |
| 225427778 | 357 | PREDICTED: epimerase family protein slr1 | 0.938 | 0.854 | 0.808 | 1e-145 | |
| 356545053 | 349 | PREDICTED: epimerase family protein slr1 | 0.941 | 0.876 | 0.799 | 1e-145 | |
| 449520154 | 306 | PREDICTED: epimerase family protein slr1 | 0.935 | 0.993 | 0.801 | 1e-143 | |
| 449461621 | 348 | PREDICTED: epimerase family protein slr1 | 0.935 | 0.873 | 0.798 | 1e-143 | |
| 363808106 | 350 | uncharacterized protein LOC100813590 [Gl | 0.941 | 0.874 | 0.786 | 1e-142 |
| >gi|224105291|ref|XP_002313756.1| predicted protein [Populus trichocarpa] gi|222850164|gb|EEE87711.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 542 bits (1397), Expect = e-152, Method: Compositional matrix adjust.
Identities = 261/317 (82%), Positives = 286/317 (90%), Gaps = 3/317 (0%)
Query: 9 LLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF 68
L C Q +MTVSVTGATGFIG+RLVQRL AD H VRVLTRSRSKA+LIFP K+
Sbjct: 37 LRVCCASDQTQKMTVSVTGATGFIGKRLVQRLHADKHSVRVLTRSRSKAQLIFPVKE--- 93
Query: 69 FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128
FPG++IAEE W+DCIQGS AVVNLAG PI TRWS E+KKEIK+SRI+VTSKVVDLIN S
Sbjct: 94 FPGILIAEERDWKDCIQGSNAVVNLAGLPISTRWSPEVKKEIKQSRIKVTSKVVDLINGS 153
Query: 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 188
PEGVRP+VLVSATA+GYYG+SET+VFDE SPSGNDYLAEVCREWE TALKVNKDVRLALI
Sbjct: 154 PEGVRPAVLVSATAVGYYGSSETQVFDERSPSGNDYLAEVCREWEATALKVNKDVRLALI 213
Query: 189 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248
RIG+VLGKDGGALAKMIPLFM+FAGGP+GSGQQWFSWIHLDDIVNLIYEAL+NPSY+GVI
Sbjct: 214 RIGVVLGKDGGALAKMIPLFMLFAGGPMGSGQQWFSWIHLDDIVNLIYEALTNPSYKGVI 273
Query: 249 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 308
NGTAPNPVRLAEMC+ LGNV+GRPSWLPVP+FALKAVLGEGA VVL+GQRV+P RAKELG
Sbjct: 274 NGTAPNPVRLAEMCEQLGNVMGRPSWLPVPDFALKAVLGEGASVVLDGQRVLPTRAKELG 333
Query: 309 FPFKYRYVKDALKAIMS 325
F FKY VKDALK I+S
Sbjct: 334 FQFKYPQVKDALKTILS 350
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255543879|ref|XP_002513002.1| conserved hypothetical protein [Ricinus communis] gi|223548013|gb|EEF49505.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 259/308 (84%), Positives = 286/308 (92%), Gaps = 3/308 (0%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 76
+ +QMTVSVTGATGFIGRRLVQRL ADNH + VLTRS+SKA+LIFPGK FP ++IAE
Sbjct: 47 KENQMTVSVTGATGFIGRRLVQRLHADNHNIHVLTRSKSKAQLIFPGKD---FPRIVIAE 103
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
EP+W++ IQGS AVVNLAG PI TRWSSEIKKEIK+SRIRVTSKVVDLIN+SPEGVRP+V
Sbjct: 104 EPEWKNSIQGSDAVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVDLINDSPEGVRPTV 163
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
LVSATA+GYYG+SET VFDESSPSGNDYLA VCREWEGTALKVNKDVRLALIRIG+VLGK
Sbjct: 164 LVSATAVGYYGSSETRVFDESSPSGNDYLAGVCREWEGTALKVNKDVRLALIRIGVVLGK 223
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256
+GGALAKMIPLFMMFAGGPLGSG+QWFSWIHL+DIVNLIYEAL NPSY+GVINGTAPNPV
Sbjct: 224 NGGALAKMIPLFMMFAGGPLGSGRQWFSWIHLEDIVNLIYEALINPSYKGVINGTAPNPV 283
Query: 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 316
RLAEMC+ LGNVLGRPSWLPVP+FALKAVLGEGA VVL+GQ+V+P +AKELGF FKY YV
Sbjct: 284 RLAEMCEQLGNVLGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPTKAKELGFQFKYPYV 343
Query: 317 KDALKAIM 324
KDALK I+
Sbjct: 344 KDALKTIL 351
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|18399648|ref|NP_565505.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|11692898|gb|AAG40052.1|AF324701_1 At2g21280 [Arabidopsis thaliana] gi|11908096|gb|AAG41477.1|AF326895_1 unknown protein [Arabidopsis thaliana] gi|12642906|gb|AAK00395.1|AF339713_1 unknown protein [Arabidopsis thaliana] gi|20197908|gb|AAD23676.2| expressed protein [Arabidopsis thaliana] gi|23397230|gb|AAN31897.1| unknown protein [Arabidopsis thaliana] gi|34787115|emb|CAD56855.1| SulA protein [Arabidopsis thaliana] gi|330252061|gb|AEC07155.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust.
Identities = 253/316 (80%), Positives = 280/316 (88%), Gaps = 3/316 (0%)
Query: 9 LLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF 68
+ C + SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+SKAE IFP K
Sbjct: 34 FMVLCSSQKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPAKD--- 90
Query: 69 FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128
FPG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRIRVTSKVVDLIN S
Sbjct: 91 FPGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNS 150
Query: 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 188
P RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDVR+ALI
Sbjct: 151 PAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDVRVALI 210
Query: 189 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248
RIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPSY+GVI
Sbjct: 211 RIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVI 270
Query: 249 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 308
NGTAPNPVRL EMC LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P RAKELG
Sbjct: 271 NGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKELG 330
Query: 309 FPFKYRYVKDALKAIM 324
F FKY+YVKDAL+AIM
Sbjct: 331 FEFKYKYVKDALRAIM 346
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357473587|ref|XP_003607078.1| hypothetical protein MTR_4g072040 [Medicago truncatula] gi|355508133|gb|AES89275.1| hypothetical protein MTR_4g072040 [Medicago truncatula] | Back alignment and taxonomy information |
|---|
Score = 528 bits (1359), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/317 (80%), Positives = 283/317 (89%), Gaps = 6/317 (1%)
Query: 12 FCRLLQAS---QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF 68
+C Q+S QM +SVTGATGFIG+RLVQ+LQA+NH+V VLTRS+SKAELIFP K
Sbjct: 37 WCGTDQSSKGDQMIISVTGATGFIGKRLVQKLQAENHRVHVLTRSKSKAELIFPVKD--- 93
Query: 69 FPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128
FPGV IA EP+W+DCIQGST VVNLAG PI TRWSSEIKKEIK+SR+RVTSKVVDLI +
Sbjct: 94 FPGVKIAGEPEWKDCIQGSTGVVNLAGLPISTRWSSEIKKEIKQSRVRVTSKVVDLIKRA 153
Query: 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 188
P+ RP VLVSATA+GYYGTSET+VFDE SPSG DYLAEVCREWE TALK N DVR+ALI
Sbjct: 154 PDETRPQVLVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKANGDVRVALI 213
Query: 189 RIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248
RIG+VLGKDGGALAKMIPLFMMFAGGPLGSG QWFSWIHLDDIVNLIYEALSNPSY+GVI
Sbjct: 214 RIGVVLGKDGGALAKMIPLFMMFAGGPLGSGNQWFSWIHLDDIVNLIYEALSNPSYKGVI 273
Query: 249 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 308
NGTAPNPVRL+E+C+ LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP +AK+LG
Sbjct: 274 NGTAPNPVRLSELCEQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQKVVPTQAKKLG 333
Query: 309 FPFKYRYVKDALKAIMS 325
F FKY YVKDALKAI+S
Sbjct: 334 FSFKYSYVKDALKAIIS 350
|
Source: Medicago truncatula Species: Medicago truncatula Genus: Medicago Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297824979|ref|XP_002880372.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata] gi|297326211|gb|EFH56631.1| hypothetical protein ARALYDRAFT_900542 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1348), Expect = e-146, Method: Compositional matrix adjust.
Identities = 250/317 (78%), Positives = 282/317 (88%), Gaps = 3/317 (0%)
Query: 8 ILLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR 67
+L + + + +QMTVSVTGATGFIGR+LVQRL+ADNH +RVLTRS+SKAE IFP K
Sbjct: 36 VLCSSEKSQKENQMTVSVTGATGFIGRKLVQRLRADNHSIRVLTRSKSKAEQIFPAKD-- 93
Query: 68 FFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127
FPG++IAEE W++C+QGSTAVVNLAG PI TRWS EIKKEIK+SRIR+TSKVVDLIN
Sbjct: 94 -FPGIVIAEESDWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKDSRIRITSKVVDLINN 152
Query: 128 SPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLAL 187
SP RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDVR+AL
Sbjct: 153 SPAEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDVRVAL 212
Query: 188 IRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 247
IRIG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPSY+GV
Sbjct: 213 IRIGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYQGV 272
Query: 248 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL 307
INGTAPNPVRL EMC LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P RAKEL
Sbjct: 273 INGTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKEL 332
Query: 308 GFPFKYRYVKDALKAIM 324
GF FKY+YVKDAL+AIM
Sbjct: 333 GFEFKYKYVKDALRAIM 349
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225427778|ref|XP_002268617.1| PREDICTED: epimerase family protein slr1223 [Vitis vinifera] gi|297744722|emb|CBI37984.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust.
Identities = 249/308 (80%), Positives = 276/308 (89%), Gaps = 3/308 (0%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 76
+ +QM VSVTGATGFIGRRLVQRL ADNH+V VLTRSRSKA+ IFP K F G++IAE
Sbjct: 50 KENQMIVSVTGATGFIGRRLVQRLLADNHRVHVLTRSRSKAQFIFPAKD---FRGIVIAE 106
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
EP+W+DCIQGS AVVNLAG PI TRWS EIKKEIKESR+R+TSKVVD+IN S + VRP+V
Sbjct: 107 EPEWKDCIQGSNAVVNLAGMPISTRWSPEIKKEIKESRVRITSKVVDIINNSQDEVRPTV 166
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
LVSA+A+GYYG SET VF E SPSGNDYLAEVCREWEG A KVNKDVRL LIRIG+VLGK
Sbjct: 167 LVSASAIGYYGASETLVFKEQSPSGNDYLAEVCREWEGKAFKVNKDVRLVLIRIGVVLGK 226
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256
DGGALAKMIPLF +FAGGPLGSG+QWFSWIHLDDIV LIYEALSNPSY GVINGTAPNPV
Sbjct: 227 DGGALAKMIPLFNLFAGGPLGSGKQWFSWIHLDDIVELIYEALSNPSYTGVINGTAPNPV 286
Query: 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 316
RLAEMCDHLGN +GRPSWLPVP+FALKAVLGEGA VVL+GQ+V+PARA++LGF FKY YV
Sbjct: 287 RLAEMCDHLGNAMGRPSWLPVPDFALKAVLGEGASVVLDGQKVLPARAQQLGFTFKYPYV 346
Query: 317 KDALKAIM 324
KDAL+AI+
Sbjct: 347 KDALRAIL 354
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356545053|ref|XP_003540960.1| PREDICTED: epimerase family protein slr1223-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 519 bits (1336), Expect = e-145, Method: Compositional matrix adjust.
Identities = 247/309 (79%), Positives = 277/309 (89%), Gaps = 3/309 (0%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 76
+ ++M +SVTGATGFIGRRLVQRL ADNH V VLTRS+SKAE IFP K FPG+ IAE
Sbjct: 44 KGNKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSKAETIFPAKD---FPGIKIAE 100
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
EP+W+D +QGST VVNLAG PI TRWS EIKKEIK+SRIRVTSKV +LIN +P+ +RP V
Sbjct: 101 EPEWKDSVQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVAELINSAPDDIRPKV 160
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
VSATA+GYYGTSET+VFDE SPSG DYLAEVCREWE TALKVN DVR+ALIRIG+VLGK
Sbjct: 161 FVSATAVGYYGTSETQVFDEQSPSGKDYLAEVCREWESTALKVNGDVRVALIRIGVVLGK 220
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256
DGGAL KMIP+F +FAGGPLGSG+QWFSWIHL+DIVNLIYEALSNPSY+GVINGTAPNPV
Sbjct: 221 DGGALVKMIPIFNLFAGGPLGSGKQWFSWIHLEDIVNLIYEALSNPSYKGVINGTAPNPV 280
Query: 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 316
RLAE+CD LGNVLGRPSWLPVP+FALKAVLGEGA VVLEGQRV+P +AK+LGFPFKY YV
Sbjct: 281 RLAELCDQLGNVLGRPSWLPVPDFALKAVLGEGATVVLEGQRVLPIQAKKLGFPFKYPYV 340
Query: 317 KDALKAIMS 325
KDAL+AI+S
Sbjct: 341 KDALQAILS 349
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449520154|ref|XP_004167099.1| PREDICTED: epimerase family protein slr1223-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust.
Identities = 246/307 (80%), Positives = 274/307 (89%), Gaps = 3/307 (0%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
+Q+TVS+TGATGFIGRRLVQRL AD H +RVLTRS+SKAELIFP R FPG+MIAEEP
Sbjct: 3 NQLTVSITGATGFIGRRLVQRLHADKHNIRVLTRSKSKAELIFP---AREFPGIMIAEEP 59
Query: 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138
W++CIQGS VVNLAG PI TRWSSEIKKEIK+SRIRVTSKVV LIN++P+ RP+VLV
Sbjct: 60 GWKNCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVLV 119
Query: 139 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
SATA+GYYGTSET FDE SPSGNDYLA+VCREWE TAL VNK+VR+ALIRIG+VLGK+G
Sbjct: 120 SATAVGYYGTSETATFDERSPSGNDYLAQVCREWEATALGVNKNVRVALIRIGVVLGKEG 179
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
GALAKMIPLFMMFAGGPLGSG+QWFSWIHLDDIVNLIYEAL NPSY+GVINGTAPNPV L
Sbjct: 180 GALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTL 239
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
E+C LG +GRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP RAKELGF +KY VKD
Sbjct: 240 GELCKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQKVVPTRAKELGFSYKYPSVKD 299
Query: 319 ALKAIMS 325
ALK+I+S
Sbjct: 300 ALKSILS 306
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449461621|ref|XP_004148540.1| PREDICTED: epimerase family protein slr1223-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1318), Expect = e-143, Method: Compositional matrix adjust.
Identities = 245/307 (79%), Positives = 275/307 (89%), Gaps = 3/307 (0%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
+Q+TVS+TGATGFIGRRLVQRL AD H +RVLTRS+SKAELIFP ++ FPG+MIAEEP
Sbjct: 45 NQLTVSITGATGFIGRRLVQRLHADKHNIRVLTRSKSKAELIFPARE---FPGIMIAEEP 101
Query: 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138
W++CIQGS VVNLAG PI TRWSSEIKKEIK+SRIRVTSKVV LIN++P+ RP+VLV
Sbjct: 102 GWKNCIQGSDGVVNLAGMPISTRWSSEIKKEIKQSRIRVTSKVVSLINDAPDAARPTVLV 161
Query: 139 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
SATA+GYYGTSET FDE SPSGNDYLA+VCREWE TAL VNK+VR+ALIRIG+VLGK+G
Sbjct: 162 SATAVGYYGTSETATFDERSPSGNDYLAQVCREWEATALGVNKNVRVALIRIGVVLGKEG 221
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
GALAKMIPLFMMFAGGPLGSG+QWFSWIHLDDIVNLIYEAL NPSY+GVINGTAPNPV L
Sbjct: 222 GALAKMIPLFMMFAGGPLGSGKQWFSWIHLDDIVNLIYEALINPSYQGVINGTAPNPVTL 281
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
E+C LG +GRPSWLPVP+FALKAVLGEGA VVLEGQ+VVP RAKELGF +KY VKD
Sbjct: 282 GELCKGLGAEMGRPSWLPVPDFALKAVLGEGASVVLEGQKVVPTRAKELGFSYKYPSVKD 341
Query: 319 ALKAIMS 325
ALK+I+S
Sbjct: 342 ALKSILS 348
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|363808106|ref|NP_001241963.1| uncharacterized protein LOC100813590 [Glycine max] gi|255639021|gb|ACU19811.1| unknown [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 511 bits (1316), Expect = e-142, Method: Compositional matrix adjust.
Identities = 243/309 (78%), Positives = 273/309 (88%), Gaps = 3/309 (0%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 76
+ ++M +SVTGATGFIGRRLVQRL ADNH V VLTRS+S AE IFP K FPG+ IAE
Sbjct: 45 KGNKMIISVTGATGFIGRRLVQRLHADNHSVHVLTRSKSNAETIFPAKD---FPGIKIAE 101
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
EP+W+D IQGST VVNLAG PI TRWS EIKKEIK+SRIRVTSKVV+LIN +P+ +RP V
Sbjct: 102 EPEWKDSIQGSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVELINSAPDDIRPKV 161
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
VSATA+GYY TSET+VFDE SPSG DYLAEVCREWE TALKVN VR+ALIRIG+VLGK
Sbjct: 162 FVSATAVGYYSTSETQVFDEQSPSGKDYLAEVCREWESTALKVNGGVRVALIRIGVVLGK 221
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256
DGGALAKMIP+F +FAGGPLGSG QWFSWIHL+DIVNLIYE LSNPSY+GVINGTAPNPV
Sbjct: 222 DGGALAKMIPMFKLFAGGPLGSGTQWFSWIHLEDIVNLIYETLSNPSYKGVINGTAPNPV 281
Query: 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 316
RLAE+CD LG+ LGRPSWLPVP+FALKAVLGEGA VVLEGQ+V+P +AK+LGFPFKY YV
Sbjct: 282 RLAELCDQLGHALGRPSWLPVPDFALKAVLGEGATVVLEGQKVLPTQAKKLGFPFKYSYV 341
Query: 317 KDALKAIMS 325
KDAL+AI+S
Sbjct: 342 KDALQAILS 350
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 325 | ||||||
| TAIR|locus:2050090 | 347 | SULA [Arabidopsis thaliana (ta | 0.96 | 0.899 | 0.803 | 2.3e-135 | |
| UNIPROTKB|P77775 | 297 | yfcH "conserved protein with N | 0.904 | 0.989 | 0.408 | 5.3e-56 | |
| UNIPROTKB|Q60BH9 | 300 | MCA0496 "Putative uncharacteri | 0.898 | 0.973 | 0.394 | 1.2e-51 | |
| UNIPROTKB|Q81YW5 | 301 | BAS0486 "Cell division inhibit | 0.907 | 0.980 | 0.370 | 4e-51 | |
| TIGR_CMR|BA_0515 | 301 | BA_0515 "cell division inhibit | 0.907 | 0.980 | 0.370 | 4e-51 | |
| UNIPROTKB|Q8ED48 | 296 | yfcH "Predicted nucleoside-dip | 0.904 | 0.993 | 0.379 | 5.8e-50 | |
| TIGR_CMR|SO_2922 | 296 | SO_2922 "conserved hypothetica | 0.904 | 0.993 | 0.379 | 5.8e-50 | |
| UNIPROTKB|Q4K6B2 | 302 | PFL_5142 "Uncharacterized prot | 0.898 | 0.966 | 0.403 | 2e-49 | |
| UNIPROTKB|Q47V18 | 296 | CPS_4710 "Putative uncharacter | 0.898 | 0.986 | 0.364 | 6e-48 | |
| TIGR_CMR|CPS_4710 | 296 | CPS_4710 "conserved hypothetic | 0.898 | 0.986 | 0.364 | 6e-48 |
| TAIR|locus:2050090 SULA [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1326 (471.8 bits), Expect = 2.3e-135, P = 2.3e-135
Identities = 253/315 (80%), Positives = 280/315 (88%)
Query: 10 LTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF 69
+ C + SQMTVSVTGATGFIGRRLVQRL+ADNH +RVLTRS+SKAE IFP K F
Sbjct: 35 MVLCSSQKESQMTVSVTGATGFIGRRLVQRLRADNHAIRVLTRSKSKAEQIFPAKD---F 91
Query: 70 PGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP 129
PG++IAEE +W++C+QGSTAVVNLAG PI TRWS EIKKEIK SRIRVTSKVVDLIN SP
Sbjct: 92 PGIVIAEESEWKNCVQGSTAVVNLAGLPISTRWSPEIKKEIKGSRIRVTSKVVDLINNSP 151
Query: 130 EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIR 189
RP+VLVSATA+GYYGTSET VFDE+SPSG DYLAEVCREWEGTALK NKDVR+ALIR
Sbjct: 152 AEARPTVLVSATAVGYYGTSETGVFDENSPSGKDYLAEVCREWEGTALKANKDVRVALIR 211
Query: 190 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 249
IG+VLGKDGGALA MIP F MFAGGPLGSGQQWFSWIH+DD+VNLIYEAL+NPSY+GVIN
Sbjct: 212 IGVVLGKDGGALAMMIPFFQMFAGGPLGSGQQWFSWIHVDDLVNLIYEALTNPSYKGVIN 271
Query: 250 GTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF 309
GTAPNPVRL EMC LG+VL RPSWLPVP+FALKA+LGEGA VVLEGQ+V+P RAKELGF
Sbjct: 272 GTAPNPVRLGEMCQQLGSVLSRPSWLPVPDFALKALLGEGATVVLEGQKVLPVRAKELGF 331
Query: 310 PFKYRYVKDALKAIM 324
FKY+YVKDAL+AIM
Sbjct: 332 EFKYKYVKDALRAIM 346
|
|
| UNIPROTKB|P77775 yfcH "conserved protein with NAD(P)-binding Rossmann-fold domain" [Escherichia coli K-12 (taxid:83333)] | Back alignment and assigned GO terms |
|---|
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 125/306 (40%), Positives = 182/306 (59%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TG TG IGR L+ RL HQ+ V+TR+ KA + G + + G +A++
Sbjct: 1 MNIVITGGTGLIGRHLIPRLLELGHQITVVTRNPQKASSVL-GPRVTLWQG--LADQSN- 56
Query: 81 RDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ G AV+NLAG PI RW+ E K+ + +SR +T K+VDLIN S PSVL+S
Sbjct: 57 ---LNGVDAVINLAGEPIADKRWTHEQKERLCQSRWNITQKLVDLINASD--TPPSVLIS 111
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDG 198
+A GYYG V E P N++ ++C WE A + D R+ L+R G+VL DG
Sbjct: 112 GSATGYYGDLGEVVVTEEEPPHNEFTHKLCARWEEIACRAQSDKTRVCLLRTGVVLAPDG 171
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
G L KM+P F + GGP+GSG+Q+ +WIH+DD+VN I L N RG N +P PVR
Sbjct: 172 GILGKMLPPFRLGLGGPIGSGRQYLAWIHIDDMVNGILWLLDN-ELRGPFNMVSPYPVRN 230
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
+ LG+ L RP+ L VP A++ ++GE + +VL GQR +P R +E GF F++ +++
Sbjct: 231 EQFAHALGHALHRPAILRVPATAIRLLMGESSVLVLGGQRALPKRLEEAGFAFRWYDLEE 290
Query: 319 ALKAIM 324
AL ++
Sbjct: 291 ALADVV 296
|
|
| UNIPROTKB|Q60BH9 MCA0496 "Putative uncharacterized protein" [Methylococcus capsulatus str. Bath (taxid:243233)] | Back alignment and assigned GO terms |
|---|
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 120/304 (39%), Positives = 174/304 (57%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQ 79
M + VTG TGFIGR L +RL H++ VL+R G+ P I PQ
Sbjct: 1 MHLLVTGGTGFIGRSLCRRLLERGHRLTVLSRQAPDTVRRLCGETV--MPVAAIDSLSPQ 58
Query: 80 WRDCIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138
G AVVNLAG PI RW+ K+ + ESR+ +T+ +VD I + +P VL+
Sbjct: 59 -----AGFDAVVNLAGEPIADKRWTEARKRLLWESRVGLTTALVDYIARAES--KPPVLI 111
Query: 139 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-NKDVRLALIRIGIVLGKD 197
S +A+GYYG + DE S G+ + +C WE A + VR+ ++R G+V+G++
Sbjct: 112 SGSAVGYYGNRGDTLLDEESAHGDGFGHRLCAAWEEAASRAAGHGVRVCMLRTGLVVGRN 171
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GG L +M+PLF + GG +G G+QW SWIHLDD + + + + G N TAPNPV
Sbjct: 172 GGFLQRMLPLFRLGLGGRIGEGRQWMSWIHLDDHIAITEYLIEDAHLEGAFNATAPNPVT 231
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
E + L +L RP+ LPVP F L+ LGE A ++L GQRV+P R ++ F F+Y +++
Sbjct: 232 NREFTECLARLLNRPAPLPVPAFTLRLALGETAELLLGGQRVIPKRLQQEPFRFRYEHLE 291
Query: 318 DALK 321
+AL+
Sbjct: 292 NALR 295
|
|
| UNIPROTKB|Q81YW5 BAS0486 "Cell division inhibitor-like protein" [Bacillus anthracis (taxid:1392)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 114/308 (37%), Positives = 175/308 (56%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 79
M ++++G TGFIG L + V +LTR ++ E P + ++ P + P
Sbjct: 1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ V+NLAG I +RW+ + KK I SRI+ T ++ + P +P ++
Sbjct: 57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110
Query: 140 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 197
A+A+GYYGTSETE F E + GND+LA WE A K +R R G++LG D
Sbjct: 111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GGAL KM+ + + GG +GSG+QW SWIH+DD+ ++I + G +N TAP P+R
Sbjct: 171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
+ + + ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + + +
Sbjct: 231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290
Query: 318 DALKAIMS 325
AL+ I+S
Sbjct: 291 HALQNILS 298
|
|
| TIGR_CMR|BA_0515 BA_0515 "cell division inhibitor-like protein" [Bacillus anthracis str. Ames (taxid:198094)] | Back alignment and assigned GO terms |
|---|
Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
Identities = 114/308 (37%), Positives = 175/308 (56%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQ 79
M ++++G TGFIG L + V +LTR ++ E P + ++ P + P
Sbjct: 1 MKIAISGGTGFIGTYLSTFFIQKGYTVYILTRKKT-TETSHPNLQYVQWTPDLQTF--P- 56
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ V+NLAG I +RW+ + KK I SRI+ T ++ + P +P ++
Sbjct: 57 ----LSSIDVVINLAGESINSRWTKKQKKIILNSRIQTTKGLIKQLQALP--AKPHTFIN 110
Query: 140 ATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 197
A+A+GYYGTSETE F E + GND+LA WE A K +R R G++LG D
Sbjct: 111 ASAIGYYGTSETESFTEQHVTPGNDFLANTVYSWEQEASKARSLGIRTIYARFGVILGPD 170
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GGAL KM+ + + GG +GSG+QW SWIH+DD+ ++I + G +N TAP P+R
Sbjct: 171 GGALPKMLLPYQFYIGGTVGSGKQWLSWIHIDDVASMIDFIIHKKEIDGPLNITAPEPIR 230
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
+ + + ++ +P WLPVP F L A+LGE + +VLEGQ V+P++A E G+ + + +
Sbjct: 231 MKGFGETIATIMKKPHWLPVPSFMLHALLGEMSILVLEGQHVLPSKAIEHGYQYTFPTID 290
Query: 318 DALKAIMS 325
AL+ I+S
Sbjct: 291 HALQNILS 298
|
|
| UNIPROTKB|Q8ED48 yfcH "Predicted nucleoside-diphosphate sugar epimerase YfcH" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 116/306 (37%), Positives = 181/306 (59%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TGA+GFIG++LV L A+ H++ +LTR + G + ++ + +E
Sbjct: 1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53
Query: 81 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D + AV+NLAG PI RWS++ K+ I +SR +T+++ LI +S P V++S
Sbjct: 54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 199
+A+G+YG DE + +++ ++C+EWE ALK R+ ++R GIVLG GG
Sbjct: 111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169
Query: 200 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259
ALAKM+P F + GGP+G G+Q SWIH+ D+V LI L + G+ N TAP PV
Sbjct: 170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229
Query: 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 319
E LG VL RP+++ P L+ +GE A ++ EGQ V+P A + GF F++ ++ A
Sbjct: 230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289
Query: 320 LKAIMS 325
LK +++
Sbjct: 290 LKDLLA 295
|
|
| TIGR_CMR|SO_2922 SO_2922 "conserved hypothetical protein" [Shewanella oneidensis MR-1 (taxid:211586)] | Back alignment and assigned GO terms |
|---|
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 116/306 (37%), Positives = 181/306 (59%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TGA+GFIG++LV L A+ H++ +LTR + G + ++ + +E
Sbjct: 1 MKILITGASGFIGQQLVAHL-ANQHELLLLTRHPGSIRQLL-GPQHQYLSSL---DEI-- 53
Query: 81 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D + AV+NLAG PI RWS++ K+ I +SR +T+++ LI +S P V++S
Sbjct: 54 -DDLNHINAVINLAGEPIVAKRWSAQQKQHICDSRWNITARLSQLILQSNNP--PQVMIS 110
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 199
+A+G+YG DE + +++ ++C+EWE ALK R+ ++R GIVLG GG
Sbjct: 111 GSAIGFYGRQGAIPIDEHAVPHSEFSHDICKEWERLALKATSKTRVCILRTGIVLGH-GG 169
Query: 200 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259
ALAKM+P F + GGP+G G+Q SWIH+ D+V LI L + G+ N TAP PV
Sbjct: 170 ALAKMLPPFKLGIGGPIGHGRQGMSWIHMHDMVALIEFLLCHQECHGIFNATAPYPVSNT 229
Query: 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 319
E LG VL RP+++ P L+ +GE A ++ EGQ V+P A + GF F++ ++ A
Sbjct: 230 EFSKTLGKVLNRPAFMTTPVPVLRLAMGEMADLLTEGQFVLPKHALDAGFTFRFEQLEPA 289
Query: 320 LKAIMS 325
LK +++
Sbjct: 290 LKDLLA 295
|
|
| UNIPROTKB|Q4K6B2 PFL_5142 "Uncharacterized protein" [Pseudomonas protegens Pf-5 (taxid:220664)] | Back alignment and assigned GO terms |
|---|
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 123/305 (40%), Positives = 175/305 (57%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TG TG IGR L + QA HQ+ V TR K + G + R V +E
Sbjct: 1 MHILLTGGTGLIGRALCRHWQAQGHQLSVWTRQPDKVAALC-GPQVR---AVKTLQE--- 53
Query: 81 RDCIQGSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D I AV+NLAG PI R WS + K + SRI +T ++ + ES E +P VLVS
Sbjct: 54 LDQIPVD-AVINLAGAPIADRPWSHKRKALLWHSRIALTETLLAWL-ESREH-KPGVLVS 110
Query: 140 ATALGYYGTS-ETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKD 197
+A+G+YG E E+ ++S P D+ +++C WE TA + VR+ L+R G+VL +
Sbjct: 111 GSAVGWYGDGGERELSEDSPPVNEDFASQLCIAWEETAQRAEAMGVRVVLVRTGLVLSPE 170
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVR 257
GG L++++ F + GGP+G+G+QW WIH+DD + LI + P +G N AP PVR
Sbjct: 171 GGFLSRLLLPFKLGLGGPIGNGRQWMPWIHIDDQIALIDFLVHQPGAQGPYNACAPKPVR 230
Query: 258 LAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317
E LG VL RP+ +P+P F L+ LGE + ++L GQR VPAR E GF F++ +
Sbjct: 231 NREFAKTLGRVLHRPALIPLPAFFLRLALGELSLLLLGGQRAVPARLLEAGFTFQFTDLP 290
Query: 318 DALKA 322
AL A
Sbjct: 291 AALDA 295
|
|
| UNIPROTKB|Q47V18 CPS_4710 "Putative uncharacterized protein" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 112/307 (36%), Positives = 170/307 (55%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + VTG TG IGR + +Q VLTR+ KA+L P K F + E +
Sbjct: 1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55
Query: 81 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D I +NLAG PI RWS K+ I +SR +T K+V++I + + +PS L+S
Sbjct: 56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107
Query: 140 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
+A+GYYG T +++ + +D+ +C++WE ALK + R+ L+R GIVL DG
Sbjct: 108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
GAL KM F + GG LG+GQQ+ SWIH+DD+++ I+ ++ G IN T+P +
Sbjct: 168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
LG + RP+W VP F L ++G+GA ++L Q + P + GF F + ++
Sbjct: 228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287
Query: 319 ALKAIMS 325
AL +M+
Sbjct: 288 ALADLMT 294
|
|
| TIGR_CMR|CPS_4710 CPS_4710 "conserved hypothetical protein TIGR01777" [Colwellia psychrerythraea 34H (taxid:167879)] | Back alignment and assigned GO terms |
|---|
Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
Identities = 112/307 (36%), Positives = 170/307 (55%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + VTG TG IGR + +Q VLTR+ KA+L P K F + E +
Sbjct: 1 MKILVTGGTGLIGRHFISAFN-HKYQFTVLTRNTQKAQLYLP-KNIEFIEQL---PEQNY 55
Query: 81 RDCIQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
D I +NLAG PI RWS K+ I +SR +T K+V++I + + +PS L+S
Sbjct: 56 FDVI------INLAGEPIIDKRWSRAQKENICQSRWNITEKIVEMIARATD--KPSCLIS 107
Query: 140 ATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
+A+GYYG T +++ + +D+ +C++WE ALK + R+ L+R GIVL DG
Sbjct: 108 GSAIGYYGETGAVSTHEDAKVTHSDFAHTLCQKWEELALKAKEHCRVVLLRTGIVLASDG 167
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
GAL KM F + GG LG+GQQ+ SWIH+DD+++ I+ ++ G IN T+P +
Sbjct: 168 GALEKMRLPFSLGLGGKLGNGQQYMSWIHIDDMIHAIHFSVQIKCIEGAINCTSPKAITN 227
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318
LG + RP+W VP F L ++G+GA ++L Q + P + GF F + ++
Sbjct: 228 EVFTKALGKEVNRPTWFSVPAFVLNILMGQGAELLLTSQNIYPQKLLSHGFHFNHSDIEH 287
Query: 319 ALKAIMS 325
AL +M+
Sbjct: 288 ALADLMT 294
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8CPY7 | Y553_STAES | No assigned EC number | 0.3387 | 0.8769 | 0.9531 | yes | no |
| Q2YSF6 | Y724_STAAB | No assigned EC number | 0.3398 | 0.8892 | 0.9633 | yes | no |
| P71373 | Y1208_HAEIN | No assigned EC number | 0.3594 | 0.8892 | 0.9763 | yes | no |
| Q5M8N4 | D39U1_MOUSE | No assigned EC number | 0.3439 | 0.8738 | 0.9220 | yes | no |
| P67232 | Y2216_MYCTU | No assigned EC number | 0.3366 | 0.8861 | 0.9568 | yes | no |
| P67233 | Y2239_MYCBO | No assigned EC number | 0.3366 | 0.8861 | 0.9568 | yes | no |
| Q6GB61 | Y734_STAAS | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| O32960 | Y860_MYCLE | No assigned EC number | 0.3557 | 0.9015 | 0.9543 | yes | no |
| Q5HHP9 | Y834_STAAC | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| Q6GIM1 | Y825_STAAR | No assigned EC number | 0.3431 | 0.8892 | 0.9633 | yes | no |
| Q17QH8 | D39U1_BOVIN | No assigned EC number | 0.3472 | 0.8861 | 0.9795 | yes | no |
| Q7A6Q5 | Y724_STAAN | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| Q99VK8 | Y769_STAAM | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| Q5HQV8 | Y438_STAEQ | No assigned EC number | 0.3387 | 0.8769 | 0.9531 | yes | no |
| Q2G035 | Y792_STAA8 | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| Q8NXL7 | Y731_STAAW | No assigned EC number | 0.3344 | 0.8861 | 0.96 | yes | no |
| O31574 | YFHF_BACSU | No assigned EC number | 0.3517 | 0.9107 | 0.9768 | yes | no |
| Q49VZ4 | Y1921_STAS1 | No assigned EC number | 0.3365 | 0.8769 | 0.9563 | yes | no |
| Q4L4J7 | Y2119_STAHJ | No assigned EC number | 0.3388 | 0.8861 | 0.9632 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | estExt_fgenesh4_pg.C_LG_IX0405 | hypothetical protein (350 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
 | estExt_Genewise1_v1.C_LG_IV3806 | hypothetical protein (326 aa) | • | 0.491 | |||||||
 | eugene3.01270014 | hypothetical protein (503 aa) | • | 0.450 | |||||||
 | gw1.2059.13.1 | annotation not avaliable (156 aa) | • | 0.427 | |||||||
 | eugene3.28270001 | Predicted protein (235 aa) | • | 0.416 | |||||||
 | estExt_fgenesh4_pm.C_LG_XII0400 | hypothetical protein (274 aa) | • | • | 0.404 | ||||||
 | gw1.19427.3.1 | hypothetical protein (361 aa) | • | 0.403 | |||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 325 | |||
| TIGR01777 | 291 | TIGR01777, yfcH, TIGR01777 family protein | 1e-133 | |
| cd05242 | 296 | cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | 1e-131 | |
| COG1090 | 297 | COG1090, COG1090, Predicted nucleoside-diphosphate | 1e-122 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 1e-25 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 3e-19 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 2e-17 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 7e-17 | |
| pfam08338 | 48 | pfam08338, DUF1731, Domain of unknown function (DU | 2e-16 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 2e-16 | |
| cd05266 | 251 | cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | 1e-15 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 6e-13 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 3e-11 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 2e-10 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 2e-10 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 4e-10 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-09 | |
| cd05240 | 306 | cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase | 1e-08 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 3e-08 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-07 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 4e-07 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 1e-06 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 4e-06 | |
| cd05256 | 304 | cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-e | 4e-06 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 7e-06 | |
| PLN02650 | 351 | PLN02650, PLN02650, dihydroflavonol-4-reductase | 1e-05 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 2e-05 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 3e-05 | |
| cd05264 | 300 | cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase | 4e-05 | |
| cd05257 | 316 | cd05257, Arna_like_SDR_e, Arna decarboxylase_like, | 4e-05 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 1e-04 | |
| cd05229 | 302 | cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | 5e-04 | |
| cd05261 | 248 | cd05261, CAPF_like_SDR_e, capsular polysaccharide | 7e-04 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 7e-04 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 9e-04 | |
| cd05238 | 305 | cd05238, Gne_like_SDR_e, Escherichia coli Gne (a n | 0.001 | |
| PLN02986 | 322 | PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase | 0.001 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 0.001 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 0.001 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 0.001 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 0.003 | |
| PLN02896 | 353 | PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | 0.003 | |
| cd05254 | 280 | cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4 | 0.004 |
| >gnl|CDD|233570 TIGR01777, yfcH, TIGR01777 family protein | Back alignment and domain information |
|---|
Score = 380 bits (977), Expect = e-133
Identities = 139/301 (46%), Positives = 187/301 (62%), Gaps = 13/301 (4%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
+ +TG TGFIGR L QRL H+V +LTRS P + D
Sbjct: 1 ILITGGTGFIGRALTQRLTKRGHEVTILTRS--------PPPGANTKWEGYKPWAGEDAD 52
Query: 83 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141
++G+ AV+NLAG PI RW+ E K+EI++SRI T +V+ I + + +P V +SA+
Sbjct: 53 SLEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRLLVEAIAAAEQ--KPKVFISAS 110
Query: 142 ALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGG 199
A+GYYG SE + E SP+G+D+LAE+CR+WE A R+ L+R GIVLG GG
Sbjct: 111 AVGYYGPSEDREYTEEDSPAGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGG 170
Query: 200 ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259
ALAKM+ F + GGPLGSG+QWFSWIH++D+V LI AL N S G +N TAP PVR
Sbjct: 171 ALAKMLLPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASVSGPVNATAPEPVRNK 230
Query: 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 319
E L L RP++ PVP F L+A+LGE A ++L+GQRV+P + E GF F+Y + +A
Sbjct: 231 EFAKALARALHRPAFFPVPAFVLRALLGEMAALLLKGQRVLPEKLLEAGFQFQYPDLDEA 290
Query: 320 L 320
L
Sbjct: 291 L 291
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein [Hypothetical proteins, Conserved]. Length = 291 |
| >gnl|CDD|187553 cd05242, SDR_a8, atypical (a) SDRs, subgroup 8 | Back alignment and domain information |
|---|
Score = 375 bits (966), Expect = e-131
Identities = 145/312 (46%), Positives = 190/312 (60%), Gaps = 25/312 (8%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 81
+ +TG TGFIGR L +RL A H+V VL+R KAE + AE W
Sbjct: 1 KIVITGGTGFIGRALTRRLTAAGHEVVVLSRRPGKAEGL--------------AEVITWD 46
Query: 82 DC------IQGSTAVVNLAGTPI-GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 134
+ G+ AV+NLAG PI RW+ KKEI SRI T +V+ I +P P
Sbjct: 47 GLSLGPWELPGADAVINLAGEPIACRRWTEANKKEILSSRIESTRVLVEAIANAPA--PP 104
Query: 135 SVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNK-DVRLALIRIGIV 193
VL+SA+A+GYYG S EV E+SPSG D+LAEVC+ WE A ++ R+ ++R G+V
Sbjct: 105 KVLISASAVGYYGHSGDEVLTENSPSGKDFLAEVCKAWEKAAQPASELGTRVVILRTGVV 164
Query: 194 LGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 253
LG DGGAL KM+ F + GGPLGSG+QW SWIH+DD+V LI A+ NP G +N AP
Sbjct: 165 LGPDGGALPKMLLPFRLGLGGPLGSGRQWMSWIHIDDLVRLIEFAIENPDLSGPVNAVAP 224
Query: 254 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFK 312
NPV AE LG L RP+ LPVP FALK GE A ++L+GQRV+P R + GF F+
Sbjct: 225 NPVTNAEFTKALGRALHRPAGLPVPAFALKLGFGEMRAELLLKGQRVLPERLLDAGFQFR 284
Query: 313 YRYVKDALKAIM 324
Y +++AL+ ++
Sbjct: 285 YPDLEEALEELL 296
|
This subgroup contains atypical SDRs of unknown function. Proteins in this subgroup have a glycine-rich NAD(P)-binding motif consensus that resembles that of the extended SDRs, (GXXGXXG or GGXGXXG), but lacks the characteristic active site residues of the SDRs. A Cys often replaces the usual Lys of the YXXXK active site motif, while the upstream Ser is generally present and Arg replaces the usual Asn. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 296 |
| >gnl|CDD|224015 COG1090, COG1090, Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Score = 351 bits (904), Expect = e-122
Identities = 141/305 (46%), Positives = 189/305 (61%), Gaps = 12/305 (3%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
+ +TG TG IGR L RL+ HQV +LTR KA + G+ A
Sbjct: 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-PNVTLWEGLADALT----- 54
Query: 83 CIQGSTAVVNLAGTPIGT-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141
G AV+NLAG PI RW+ + K+EI++SRI T K+V+LI S +P VL+SA+
Sbjct: 55 --LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASET--KPKVLISAS 110
Query: 142 ALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGA 200
A+GYYG S V E SP G+D+LA++C++WE AL+ + R+ L+R G+VL DGGA
Sbjct: 111 AVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGA 170
Query: 201 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAE 260
L KM+PLF + GG LGSG+QWFSWIH++D+VN I L N G N TAPNPVR E
Sbjct: 171 LGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNKE 230
Query: 261 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320
LG L RP+ LPVP FAL+ +LGE A ++L GQRV+P + + GF F+Y +++AL
Sbjct: 231 FAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEAL 290
Query: 321 KAIMS 325
I+
Sbjct: 291 ADILK 295
|
Length = 297 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 104 bits (260), Expect = 1e-25
Identities = 67/323 (20%), Positives = 120/323 (37%), Gaps = 35/323 (10%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + VTG GFIG LV+RL A H VR L R R + + G F + +
Sbjct: 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV--EFVVLDLTDRDLVD 58
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
AV++LA ++ E + + T +++ GV+ V S+
Sbjct: 59 ELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA--RAAGVKRFVFASS 116
Query: 141 TALGYYGTSETEVFDESSP---SGNDY-----LAE-VCREWEGTALKVNKDVRLALIRIG 191
+ YG DE N Y AE + R + + + ++R
Sbjct: 117 VS-VVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLY-----GLPVVILRPF 170
Query: 192 IVLG----KDGGALAKMIPLFMMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSNPS 243
V G D + + + G P+ G G Q ++++DD+ + + AL NP
Sbjct: 171 NVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD 230
Query: 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 303
G+ + + E+ + + +G + L V + EG+ + ++
Sbjct: 231 GGVFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYI------PLGRRGDLREGKLLDISK 284
Query: 304 AK-ELGFPFKYRYVKDALKAIMS 325
A+ LG+ K ++ L +
Sbjct: 285 ARAALGWEPKVSL-EEGLADTLE 306
|
Length = 314 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 85.4 bits (212), Expect = 3e-19
Identities = 69/288 (23%), Positives = 108/288 (37%), Gaps = 52/288 (18%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE---- 76
M V+V GATGFIGR +V RL QV V R V+ E
Sbjct: 1 MVVTVFGATGFIGRYVVNRLAKRGSQVIVPYRCE---AYARRLLVMGDLGQVLFVEFDLR 57
Query: 77 -EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135
+ R ++GS V+NL G T+ S ++ + ++ E+ GV
Sbjct: 58 DDESIRKALEGSDVVINLVGRLYETKNFS-----FEDVHVEGPERLAKAAKEA--GVERL 110
Query: 136 VLVSATALGYYGTSETEVFDESSPS--------GNDYLAEVCREWEGTALKVNKDVRLAL 187
+ +S ALG D +SPS G + + E E +
Sbjct: 111 IHIS--ALGA---------DANSPSKYLRSKAEGEEAVREAFPEA-------------TI 146
Query: 188 IRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245
+R +V G++ L + + F+ F G GQ F +++ D+ I AL +P
Sbjct: 147 VRPSVVFGREDRFLNRFAKLLAFLPFPPLIGG-GQTKFQPVYVGDVAEAIARALKDPETE 205
Query: 246 GVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 291
G P LAE+ + L + GR LP+P + + +
Sbjct: 206 GKTYELVGPKVYTLAELVELLRRLGGRKRRVLPLPLWLARLIARVKLL 253
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 81.2 bits (201), Expect = 2e-17
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 32/276 (11%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQ 79
V VTGA GFIGR LV +L + +VR+ R+ P V++AE +
Sbjct: 1 KVLVTGANGFIGRALVDKLLSRGEEVRIAVRNA-----------ENAEPSVVLAELPDID 49
Query: 80 WR-DCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
D G AVV+LA + ++ + ++ +T ++ +GV+ V
Sbjct: 50 SFTDLFLGVDAVVHLAARVHVMNDQGADPLSDYRKVNTELTRRLARAAAR--QGVKRFVF 107
Query: 138 VSA-TALGYYGTSETEVFDE-SSPSGNDYLAEVCREWEGTALKVNKD--VRLALIRIGIV 193
+S+ G FDE P+ D E E L++ + + ++R +V
Sbjct: 108 LSSVKVNGEGTVGAP--FDETDPPAPQDAYGRSKLEAERALLELGASDGMEVVILRPPMV 165
Query: 194 LGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 252
G G A+++ L P G+ + S + LD++V+ IY +S P NGT
Sbjct: 166 YGPGVRGNFARLMRLIDRGLPLPPGAVKNRRSLVSLDNLVDAIYLCISLP---KAANGTF 222
Query: 253 ----PNPVRLAEMCDHLGNVLGRPSW-LPVPEFALK 283
PV AE+ D + LG+P+ LPVP L+
Sbjct: 223 LVSDGPPVSTAELVDEIRRALGKPTRLLPVPAGLLR 258
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 7e-17
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 19/183 (10%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
+ + GATGFIGR L + L H+V +L R+ + ++ + + D
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRL--SKEDQEPVAVVEGDLRDLDSLSD 58
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+QG V++LAG P TR + E + T V++ E+ GV+ + +S+
Sbjct: 59 AVQGVDVVIHLAGAPRDTR-------DFCEVDVEGTRNVLEAAKEA--GVKHFIFISSL- 108
Query: 143 LGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA 202
G YG ++ +E+ PS + V + E + + + ++R G++ G A+A
Sbjct: 109 -GAYG----DLHEETEPSPSSPYLAVKAKTEAVLREAS--LPYTIVRPGVIYGDLARAIA 161
Query: 203 KMI 205
+
Sbjct: 162 NAV 164
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|203914 pfam08338, DUF1731, Domain of unknown function (DUF1731) | Back alignment and domain information |
|---|
Score = 72.1 bits (178), Expect = 2e-16
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 277 VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 323
VP FALK +LGE A ++LEGQRV+P + E GF F+Y ++DAL+ +
Sbjct: 1 VPAFALKLLLGEMAELLLEGQRVLPKKLLEAGFQFRYPTLEDALRDL 47
|
This domain of unknown function appears towards the C-terminus of proteins of the NAD dependent epimerase/dehydratase family (pfam01370) in bacteria, eukaryotes and archaea. Many of the proteins in which it is found are involved in cell-division inhibition. Length = 48 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 76.6 bits (189), Expect = 2e-16
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 20/237 (8%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 84
VTG TGFIG LV+RL + ++V VL R R F + + +
Sbjct: 3 VTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSES---LNTGRIRFHEGDLTDPDALERLL 59
Query: 85 QGS--TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
AV++LA G S E + + + T ++++ + GV+ V S++
Sbjct: 60 AEVQPDAVIHLAA-QSGVGASFEDPADFIRANVLGTLRLLEAARRA--GVKRFVFASSSE 116
Query: 143 LGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG 199
+ YG E +P G + Y A++ E A +R ++R+ V G
Sbjct: 117 V--YGDVADPPITEDTPLGPLSPYAAAKLAAERLVEAYARAYGLRAVILRLFNVYGPGNP 174
Query: 200 AL--AKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 249
+IP + + G P LG G Q ++++DD+ I AL +P + N
Sbjct: 175 DPFVTHVIPALIRRILEGKPILLLGDGTQRRDFLYVDDVARAILLALEHPDGGEIYN 231
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187576 cd05266, SDR_a4, atypical (a) SDRs, subgroup 4 | Back alignment and domain information |
|---|
Score = 74.7 bits (184), Expect = 1e-15
Identities = 69/290 (23%), Positives = 104/290 (35%), Gaps = 43/290 (14%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
V + G G++G+RL ++L A QV TRS K P P + A+ Q
Sbjct: 1 VLILGC-GYLGQRLARQLLAQGWQVTGTTRSPEKLAADRPAG---VTP--LAADLTQPGL 54
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+V P G + ++D + + P V+ + +S+T
Sbjct: 55 L-ADVDHLVISLPPPAG---------SYRGGYDPGLRALLDALAQLP-AVQRVIYLSST- 102
Query: 143 LGYYGTSETEVFDESSPSGNDYLAEVCR-EWEGTALKVNKDVRLALIRIGIVLGKD---G 198
G YG + E DE+SP + E E L + ++R+ + G
Sbjct: 103 -GVYGDQQGEWVDETSPPNPSTESGRALLEAEQALLALGS-KPTTILRLAGIYGPGRHPL 160
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRL 258
LA+ +G + IH+DD+V + AL P+ V N PV
Sbjct: 161 RRLAQGTGR--------PPAGNAPTNRIHVDDLVGALAFALQRPAPGPVYNVVDDLPVTR 212
Query: 259 AEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG 308
E +LG LP P F A L EG+RV R K
Sbjct: 213 GEFYQAAAELLG----LPPPPFIPFAFLR-------EGKRVSNDRLKAEL 251
|
Atypical SDRs in this subgroup are poorly defined, one member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is related to, but is different from, the archetypical SDRs, GXGXXG. This subgroup also lacks most of the characteristic active site residues of the SDRs; however, the upstream Ser is present at the usual place, and some potential catalytic residues are present in place of the usual YXXXK active site motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 251 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 65.8 bits (161), Expect = 6e-13
Identities = 50/219 (22%), Positives = 77/219 (35%), Gaps = 41/219 (18%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 84
V GATG GRRLV+ L A HQV L+R+ SKA P + + + +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----PAPGVTPVQKD-LFDLADLAEAL 57
Query: 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 144
G AVV+ G + ++D + GVR V+VSA L
Sbjct: 58 AGVDAVVDAFGA-----RPDDSDG---------VKHLLDAAARA--GVRRIVVVSAAGL- 100
Query: 145 YYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGGALA 202
Y + +P Y + A ++ + ++R G + ++G
Sbjct: 101 -YRDEPGTFRLDDAPLFPPYAR-----AKAAAEELLRASGLDWTIVRPGALFDEEGETYE 154
Query: 203 KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241
G P G S I D+ + + L N
Sbjct: 155 I------GTEGDPAG-----ESSISRADVAAALLDELEN 182
|
Length = 182 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 61.5 bits (150), Expect = 3e-11
Identities = 60/241 (24%), Positives = 92/241 (38%), Gaps = 57/241 (23%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
+ VTG GFIG LV+RL H+V V+ R
Sbjct: 1 ILVTGGAGFIGSHLVRRLLERGHEVVVIDR------------------------------ 30
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
VV+LA G S + E E+ + T +++ ++ GV+ V S +A
Sbjct: 31 ----LDVVVHLAALV-GVPASWDNPDEDFETNVVGTLNLLEAARKA--GVKRFVYAS-SA 82
Query: 143 LGYYGTSETEVFDESSPS-GNDY-----LAE-VCREWEGTALKVNKDVRLALIRIGIVLG 195
Y +E+ P + Y AE + R + + + + ++R+ V G
Sbjct: 83 SVYGSPEGLPEEEETPPRPLSPYGVSKLAAEHLLRSY-----GESYGLPVVILRLANVYG 137
Query: 196 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVI 248
L ++ F+ G PL G G Q +IH+DD+V I AL NP GV
Sbjct: 138 PGQRPRLDGVVNDFIRRALEGKPLTVFGGGNQTRDFIHVDDVVRAILHALENPLEGGGVY 197
Query: 249 N 249
N
Sbjct: 198 N 198
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 2e-10
Identities = 63/272 (23%), Positives = 95/272 (34%), Gaps = 38/272 (13%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + VTGATGF+G +V+ L A H+VR R+ A + G + + +
Sbjct: 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALAGGVEVVL---GDLRDPKSL 57
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+G V+ ++G G+ R + VV + GV+ VS
Sbjct: 58 VAGAKGVDGVLLISGLLDGSDA----------FRAVQVTAVVRAAEAAGAGVK--HGVSL 105
Query: 141 TALGYYGTSETEVFDESSPSGNDYLAEVCR--EWEGTALKVNKDVRLALIRIGIVLGKDG 198
+ LG S + + A V G +R A +G
Sbjct: 106 SVLGADAASPSALARA--------KAAVEAALRSSGIPYTT---LRRAAFYLGAGAAFIE 154
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTAPNPVR 257
A A +P+ G S I +DD+ + AL P+ G P +
Sbjct: 155 AAEAAGLPVIPRGIGR--------LSPIAVDDVAEALAAALDAPATAGRTYELAGPEALT 206
Query: 258 LAEMCDHLGNVLGRPSWL-PVPEFALKAVLGE 288
LAE+ L +GRP L P AL L
Sbjct: 207 LAELASGLDYTIGRPVGLIPEALAALTLALSG 238
|
Length = 275 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 56/296 (18%), Positives = 89/296 (30%), Gaps = 82/296 (27%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + + G T FIG+ LV+ L A H V V R R+K P
Sbjct: 1 MKILIIGGTRFIGKALVEELLAAGHDVTVFNRGRTKP--DLPEGVEHI------------ 46
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSK--------VVDLINESPEGV 132
+G R R + VVD I +P V
Sbjct: 47 -----------------VGDR----------NDRDALEELLGGEDFDVVVDTIAYTPRQV 79
Query: 133 RPS-----------VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV-- 179
+ + +S+ ++ Y V ES+P + W+ K
Sbjct: 80 ERALDAFKGRVKQYIFISSASV--YLKPGR-VITESTPLREPDAVGLSDPWDYGRGKRAA 136
Query: 180 ------NKDVRLALIRIGIVLG--KDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHL 228
++R + G G LA + G P+ G G +IH+
Sbjct: 137 EDVLIEAAAFPYTIVRPPYIYGPGDYTGRLAYFF--DRLARGRPILVPGDGHSLVQFIHV 194
Query: 229 DDIVNLIYEALSNP-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPS---WLPVPEF 280
D+ + A NP + G+ N T V E+ + LG+ + +
Sbjct: 195 KDLARALLGAAGNPKAIGGIFNITGDEAVTWDELLEACAKALGKEAEIVHVEEDFL 250
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 4e-10
Identities = 46/150 (30%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----EPQ 79
VTGATGF+G LV+ L A ++VR L RS S A L+ V + E
Sbjct: 3 VTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLLDG-------LPVEVVEGDLTDAAS 55
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
++G V +LA T ++ +KE+ + + T V+D E GVR V S
Sbjct: 56 LAAAMKGCDRVFHLAAF---TSLWAKDRKELYRTNVEGTRNVLDAALE--AGVRRVVHTS 110
Query: 140 ATALGYYGTSETEVFDE-----SSPSGNDY 164
+ A G DE P NDY
Sbjct: 111 SIAA--LGGPPDGRIDETTPWNERPFPNDY 138
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 2e-09
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 81
V V GATG +GR +V+ L +QVR L R S+AE + + AE
Sbjct: 1 KVLVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAGAEVVVGDLTDAESLA-- 58
Query: 82 DCIQGSTAVVNLAGT 96
++G AV++ AG+
Sbjct: 59 AALEGIDAVISAAGS 73
|
This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|187551 cd05240, UDP_G4E_3_SDR_e, UDP-glucose 4 epimerase (G4E), subgroup 3, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-08
Identities = 64/311 (20%), Positives = 109/311 (35%), Gaps = 36/311 (11%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82
+ VTGA G +GR L +RL A + V R + P K + +
Sbjct: 1 ILVTGAAGGLGRLLARRLAASPRVIGVDGLDRRRPPGSPP--KVEYVRLDIRDPAAADVF 58
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVSA 140
+ + AVV+LA + + RI V T V+D + GV V+ S+
Sbjct: 59 REREADAVVHLA------FILDPPRDGAERHRINVDGTQNVLDACAAA--GVPRVVVTSS 110
Query: 141 TALGYYGTSETEVFDESSPS-GNDYLAEVC--REWEG---TALKVNKDVRLALIRIGIVL 194
A+ E +P G+ A E E + + ++ + ++R +L
Sbjct: 111 VAVYGAHPDNPAPLTEDAPLRGSPEFAYSRDKAEVEQLLAEFRRRHPELNVTVLRPATIL 170
Query: 195 GKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 252
G + P + GG F ++H DD+ + A+ + G+ N
Sbjct: 171 GPGTRNTTRDFLSPRRLPVPGGFDPP----FQFLHEDDVARALVLAVRAGA-TGIFNVAG 225
Query: 253 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL--------GEGAFVVLEGQRVVPARA 304
PV L+ + LG RP LP P A A L+ V+
Sbjct: 226 DGPVPLSLVLALLG---RRPVPLPSPLPAALAAARRLGLRPLPPEQLDFLQYPPVMDTTR 282
Query: 305 KELGFPFKYRY 315
+ ++ ++
Sbjct: 283 ARVELGWQPKH 293
|
Members of this bacterial subgroup are identified as possible sugar epimerases, such as UDP-glucose 4 epimerase. However, while the NAD(P)-binding motif is fairly well conserved, not all members retain the canonical active site tetrad of the extended SDRs. UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 306 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 3e-08
Identities = 72/301 (23%), Positives = 116/301 (38%), Gaps = 35/301 (11%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQ 79
M V VTGATGFIG +V+ L A H+V L RS A+L G + G + E+
Sbjct: 1 MKVFVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKLEAAGAQV--HRGDL--EDLD 56
Query: 80 -WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVL 137
R + AV++LA T + + V + ++ + E+ G +P +
Sbjct: 57 ILRKAAAEADAVIHLAFT-----HDFDNFAQA----CEVDRRAIEALGEALRGTGKPLIY 107
Query: 138 VSATALG--YYGTSETEVFDESSPSGNDYLAEVCREWEGTALK-VNKDVR-LALIRIGIV 193
S L G E E + P+ E AL+ + VR + +V
Sbjct: 108 TSGIWLLGPTGGQEEDEEAPDDPPTPAAR-----AVSEAAALELAERGVRASVVRLPPVV 162
Query: 194 LGKDGGALAKMIPLFM--MFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248
G+ +P+ + G +G G+ + +H DD L AL V
Sbjct: 163 HGRGDHG---FVPMLIAIAREKGVSAYVGDGKNRWPAVHRDDAARLYRLALEKGKAGSVY 219
Query: 249 NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KEL 307
+ A + + ++ + +G LG P + +P A G A V Q V + + L
Sbjct: 220 HAVAEEGIPVKDIAEAIGRRLGVPV-VSIPAEEAAAHFGWLAMFVALDQPVSSQKTRRRL 278
Query: 308 G 308
G
Sbjct: 279 G 279
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 1e-07
Identities = 61/292 (20%), Positives = 99/292 (33%), Gaps = 43/292 (14%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE------- 77
VTG TGF+GR LV+RL + +V VL RS S E ++ + E
Sbjct: 3 VTGGTGFLGRHLVKRLLENGFKVLVLVRSESLGEAHERIEEAGLEADRVRVLEGDLTQPN 62
Query: 78 -----PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 132
R+ V++ A + + + ++ + I T V++L +
Sbjct: 63 LGLSAAASRELAGKVDHVIHCAAS---YDFQAP-NEDAWRTNIDGTEHVLELAARL--DI 116
Query: 133 RPSVLVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRI 190
+ VS A G + N Y E E + L + R
Sbjct: 117 QRFHYVSTAYVAGNREGNIRETELNPGQNFKNPYEQSKA-EAEQLVRAAATQIPLTVYRP 175
Query: 191 GIVLG-KDGGALAKMIPL---FMMFAGGPLGSGQQWFSWIHLDDI--VNLI-----YEAL 239
IV+G G + K+ L + A +W + + +NL+ +A+
Sbjct: 176 SIVVGDSKTGRIEKIDGLYELLNLLAKLG-----RWL-PMPGNKGARLNLVPVDYVADAI 229
Query: 240 SNPSYRGVING-----TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVL 286
S + NG T P P L E+ D + P L + A L
Sbjct: 230 VYLSKKPEANGQIFHLTDPTPQTLREIADLFKSAFLSPGLLVLLMNEPNASL 281
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 4e-07
Identities = 55/253 (21%), Positives = 94/253 (37%), Gaps = 40/253 (15%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTR----FFPGVMI 74
V VTGATGFI +V++L ++VR RS SK+ + F +
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDRLEFVIVDDL 60
Query: 75 AEEPQWRDCIQGSTAVVNLAG-TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
W + ++G V+++A P + + ++ + + T V++ + V+
Sbjct: 61 TAPNAWDEALKGVDYVIHVASPFPFTG---PDAEDDVIDPAVEGTLNVLEAAKAAG-SVK 116
Query: 134 PSVLVSATA--LGYYGTSETEVFDESS------PSGNDYLA----EVCRE---WEGTALK 178
VL S+ A +VF E N A + E WE +K
Sbjct: 117 RVVLTSSVAAVGDPTAEDPGKVFTEEDWNDLTISKSNGLDAYIASKTLAEKAAWE--FVK 174
Query: 179 VNKD-VRLALIRIGIVLG-----KDGGALAKMIPLFMMFAGGPLGSGQQ--WFSWIHLDD 230
NK L I G VLG + + ++I G L + F ++ + D
Sbjct: 175 ENKPKFELITINPGYVLGPSLLADELNSSNELI---NKLLDGKLPAIPPNLPFGYVDVRD 231
Query: 231 IVNLIYEALSNPS 243
+ + AL +P
Sbjct: 232 VADAHVRALESPE 244
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 1e-06
Identities = 68/287 (23%), Positives = 100/287 (34%), Gaps = 68/287 (23%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEE 77
VTGATG IG ++ L VR L RS +A + G P V+
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVRSDERAAALAARGAEVVVGDLDD--PAVL---- 56
Query: 78 PQWRDCIQGSTAV---VNLAGTPIGTRW----SSEIKKEIKESRIRVTSKVVDL--INES 128
+ G AV A T + ++E+ ++ +VV+L +
Sbjct: 57 ---AAALAGVDAVFFLAPPAPTADARPGYVQAAEAFASALREAGVK---RVVNLSSVGAD 110
Query: 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 188
PE PS L+ L E +V + + + N + I
Sbjct: 111 PES--PSGLIRGHWL-----ME-QVLNWAGL---PVVHLRP-----AWFMENLLSQAPSI 154
Query: 189 RIGIVLGKDGGALAKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG- 246
R K L + F G G L I DDI + + L +P + G
Sbjct: 155 R-------------KAGVLALPFPGDGRLP-------PIATDDIARVAAKLLLDPEWHGH 194
Query: 247 -VINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 291
V T P + + E+ L VLGRP ++PVPE +A L F
Sbjct: 195 RVYELTGPEDLTMNEIAAALSRVLGRPVRYVPVPEEQWEATLLSLGF 241
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 47.3 bits (113), Expect = 4e-06
Identities = 21/34 (61%), Positives = 24/34 (70%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56
V VTGATG++G RLV RL + HQVR L RS K
Sbjct: 1 VLVTGATGYVGGRLVPRLLQEGHQVRALVRSPEK 34
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187566 cd05256, UDP_AE_SDR_e, UDP-N-acetylglucosamine 4-epimerase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 47.2 bits (113), Expect = 4e-06
Identities = 63/264 (23%), Positives = 104/264 (39%), Gaps = 29/264 (10%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGK-KTRFFPGVMIAEEPQWRD 82
VTG GFIG LV+RL H+V VL S K E + K +F G I ++
Sbjct: 4 VTGGAGFIGSHLVERLLERGHEVIVLDNLSTGKKENLPEVKPNVKFIEG-DIRDDELVEF 62
Query: 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142
+G V + A S I+ IK+ + V + L GV+ + ++++
Sbjct: 63 AFEGVDYVFHQAAQA-SVPRS--IEDPIKDHEVNVLGTLNLLEAARKAGVK-RFVYASSS 118
Query: 143 LGYYGTSETEVFDESSPSGND-------YLAEV-CREWEGTALKVNKDVRLALIRIGIVL 194
YG DE P Y E+ C+ + ++ ++L R V
Sbjct: 119 -SVYGDPPYLPKDEDHPPNPLSPYAVSKYAGELYCQVFA----RLYGLPTVSL-RYFNVY 172
Query: 195 GK---DGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
G G A +IP+F+ G P G G+Q + +++D+V A + +
Sbjct: 173 GPRQDPNGGYAAVIPIFIERALKGEPPTIYGDGEQTRDFTYVEDVVEANLLAATAGAGGE 232
Query: 247 VINGTAPNPVRLAEMCDHLGNVLG 270
V N + E+ + + +LG
Sbjct: 233 VYNIGTGKRTSVNELAELIREILG 256
|
This subgroup contains UDP-N-acetylglucosamine 4-epimerase of Pseudomonas aeruginosa, WbpP, an extended SDR, that catalyzes the NAD+ dependent conversion of UDP-GlcNAc and UDPGalNA to UDP-Glc and UDP-Gal. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 304 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 7e-06
Identities = 18/38 (47%), Positives = 22/38 (57%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58
M V VTGATGF+G +V+ L +VRVL R S
Sbjct: 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRR 38
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|178256 PLN02650, PLN02650, dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Score = 46.0 bits (109), Expect = 1e-05
Identities = 33/83 (39%), Positives = 42/83 (50%), Gaps = 7/83 (8%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-----RSKAELIFPGKKTRF-FPGVMIA 75
TV VTGA+GFIG LV RL + VR R + K L PG TR +A
Sbjct: 7 TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLA 66
Query: 76 EEPQWRDCIQGSTAVVNLAGTPI 98
E + D I+G T V ++A TP+
Sbjct: 67 VEGSFDDAIRGCTGVFHVA-TPM 88
|
Length = 351 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 2e-05
Identities = 21/41 (51%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 21 MTVSVTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAEL 59
M VTG TGFIGRRLV RL + V VL R +S + L
Sbjct: 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRL 41
|
Length = 657 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 3e-05
Identities = 21/78 (26%), Positives = 33/78 (42%), Gaps = 2/78 (2%)
Query: 22 TVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
+++ GATG +G +V L + V VLTR S + F + P V A
Sbjct: 1 KIAIAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSNEFQPSGVKVVP-VDYASHESL 59
Query: 81 RDCIQGSTAVVNLAGTPI 98
++G AV++ G
Sbjct: 60 VAALKGVDAVISALGGAA 77
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187574 cd05264, UDP_G4E_5_SDR_e, UDP-glucose 4-epimerase (G4E), subgroup 5, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.6 bits (106), Expect = 4e-05
Identities = 63/278 (22%), Positives = 95/278 (34%), Gaps = 53/278 (19%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM--IAEEPQW 80
V + G GFIG LV L + QVRV RS P + G A+
Sbjct: 2 VLIVGGNGFIGSHLVDALLEEGPQVRVF--DRSIPPYELPLGGVDYIKGDYENRAD---L 56
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+ G V++LA T T ++ K I + + V V L + G+ + S
Sbjct: 57 ESALVGIDTVIHLAST---TNPATSNKNPILDIQTNVAPTVQLLEACAAAGIGKIIFAS- 112
Query: 141 TALGYYGTSETEVFDESSPS------------------------GNDYLAEVCREWE--G 174
+ YG E ES P+ G DY V R G
Sbjct: 113 SGGTVYGVPEQLPISESDPTLPISSYGISKLAIEKYLRLYQYLYGLDYT--VLRISNPYG 170
Query: 175 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234
+ + + I I L K + + P+ G G+ +I++DD+V
Sbjct: 171 PGQRPDGKQGV----IPIALNK----ILRGEPI------EIWGDGESIRDYIYIDDLVEA 216
Query: 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 272
+ L + V N + LAE+ + V GR
Sbjct: 217 LMALLRSKGLEEVFNIGSGIGYSLAELIAEIEKVTGRS 254
|
This subgroup partially conserves the characteristic active site tetrad and NAD-binding motif of the extended SDRs, and has been identified as possible UDP-glucose 4-epimerase (aka UDP-galactose 4-epimerase), a homodimeric member of the extended SDR family. UDP-glucose 4-epimerase catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 300 |
| >gnl|CDD|187567 cd05257, Arna_like_SDR_e, Arna decarboxylase_like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 4e-05
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 12/144 (8%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKT-RFFPG-VMIAE 76
V VTGA GFIG L +RL + H+VR L S L F G V A
Sbjct: 1 NVLVTGADGFIGSHLTERLLREGHEVRALDIYNSFNSWGLLDNAVHDRFHFISGDVRDAS 60
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
E ++ V +LA I +S E+ + T V++ + V
Sbjct: 61 E--VEYLVKKCDVVFHLA-ALIAIPYSYTAPLSYVETNVFGTLNVLEAACV--LYRKRVV 115
Query: 137 LVSATALGYYGTSETEVFDESSPS 160
S + + YGT++ DE P
Sbjct: 116 HTSTSEV--YGTAQDVPIDEDHPL 137
|
Decarboxylase domain of ArnA. ArnA, is an enzyme involved in the modification of outer membrane protein lipid A of gram-negative bacteria. It is a bifunctional enzyme that catalyzes the NAD-dependent decarboxylation of UDP-glucuronic acid and N-10-formyltetrahydrofolate-dependent formylation of UDP-4-amino-4-deoxy-l-arabinose; its NAD-dependent decaboxylating activity is in the C-terminal 360 residues. This subgroup belongs to the extended SDR family, however the NAD binding motif is not a perfect match and the upstream Asn of the canonical active site tetrad is not conserved. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 316 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 42.6 bits (101), Expect = 1e-04
Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 7/48 (14%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV 72
VTGATG +G +V+ L A V L R+ KA K GV
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------KAFAADGV 43
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187540 cd05229, SDR_a3, atypical (a) SDRs, subgroup 3 | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 5e-04
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 5/82 (6%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 81
T V GA+G IGR + + L+ VR+++RS SK M A
Sbjct: 1 TAHVLGASGPIGREVARELRRRGWDVRLVSRSGSKLAW--LPGVEIVAADAMDAS--SVI 56
Query: 82 DCIQGSTAVVNLAGTPIGTRWS 103
+G+ + + A P TRW
Sbjct: 57 AAARGADVIYHCAN-PAYTRWE 77
|
These atypical SDR family members of unknown function have a glycine-rich NAD(P)-binding motif consensus that is very similar to the extended SDRs, GXXGXXG. Generally, this group has poor conservation of the active site tetrad, However, individual sequences do contain matches to the YXXXK active site motif, and generally Tyr or Asn in place of the upstream Ser found in most SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 302 |
| >gnl|CDD|187571 cd05261, CAPF_like_SDR_e, capsular polysaccharide assembling protein (CAPF) like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.4 bits (95), Expect = 7e-04
Identities = 32/133 (24%), Positives = 56/133 (42%), Gaps = 31/133 (23%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + +TGA GFIG+ L+ RL+ + R ++E +
Sbjct: 1 MKILITGAKGFIGKNLIARLKEQKD-DDIFFYDRE-------------------SDESEL 40
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS- 139
D +QG+ + +LAG R E E + + +T +++D + + G +P +L+S
Sbjct: 41 DDFLQGADFIFHLAGV---NRPKDE--AEFESGNVGLTERLLDALTRN--GKKPPILLSS 93
Query: 140 ---ATALGYYGTS 149
A YG S
Sbjct: 94 SIQAALDNPYGKS 106
|
This subgroup of extended SDRs, includes some members which have been identified as capsular polysaccharide assembling proteins, such as Staphylococcus aureus Cap5F which is involved in the biosynthesis of N-acetyl-l-fucosamine, a constituent of surface polysaccharide structures of S. aureus. This subgroup has the characteristic active site tetrad and NAD-binding motif of extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 248 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58
TV +TGATGF+G L++ L + Q +V+ R+ +E
Sbjct: 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASE 37
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 9e-04
Identities = 60/266 (22%), Positives = 99/266 (37%), Gaps = 46/266 (17%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMIAE 76
V VTGA+GF+ +V++L ++VR R SK + + PG + +
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPSKVKKVNHLLDLDAKPGRLELAVADLTD 60
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
E + + I+G V ++A TP+ +SS+ E+ + I T + + V+ V
Sbjct: 61 EQSFDEVIKGCAGVFHVA-TPV--SFSSKDPNEVIKPAIGGTLNALKAAAAAKS-VKRFV 116
Query: 137 LVS--ATALGYYGTSETEVFDESSPSGNDYLAEVCRE-----W---------EGTALKVN 180
L S + L E V DE S + L E + W E A K
Sbjct: 117 LTSSAGSVLIPKPNVEGIVLDEKSWN----LEEFDSDPKKSAWVYAASKTLAEKAAWKFA 172
Query: 181 KDVRLALIRI------GIVLGKDGGA---LAKMIP---LFMMFAGGPLGSGQQWFSWIHL 228
+ + LI + G + + + A + + A + G ++H+
Sbjct: 173 DENNIDLITVIPTLTIGTIFDSETPSSSGWAMSLITGNEGVSPALALIPPGY----YVHV 228
Query: 229 DDIVNLIYEALSNPSYRGVINGTAPN 254
DI L P RG TA N
Sbjct: 229 VDICLAHIGCLELPIARGRYICTAGN 254
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187549 cd05238, Gne_like_SDR_e, Escherichia coli Gne (a nucleoside-diphosphate-sugar 4-epimerase)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 40.1 bits (94), Expect = 0.001
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
M V +TGA+GF+G+RL +RL +D R++
Sbjct: 1 MKVLITGASGFVGQRLAERLLSDVPNERLI 30
|
Nucleoside-diphosphate-sugar 4-epimerase has the characteristic active site tetrad and NAD-binding motif of the extended SDR, and is related to more specifically defined epimerases such as UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), which catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup includes Escherichia coli 055:H7 Gne, a UDP-GlcNAc 4-epimerase, essential for O55 antigen synthesis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 305 |
| >gnl|CDD|178567 PLN02986, PLN02986, cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Score = 40.0 bits (93), Expect = 0.001
Identities = 65/257 (25%), Positives = 109/257 (42%), Gaps = 40/257 (15%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTR---SRSKAE--LIFPGKKTR--FFPGVMIA 75
V VTGA+G+I +V+ L + V+ R R K E L G K R F ++
Sbjct: 8 VCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLL- 66
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135
EE + I+G AV + A T + + E+ + ++ T V++ E+P V+
Sbjct: 67 EESSFEQAIEGCDAVFHTASPVFFT--VKDPQTELIDPALKGTINVLNTCKETPS-VKRV 123
Query: 136 VLVSATALGYY---GTSETEVFDE---SSPSGNDYLAEVCRE---W--------EGTALK 178
+L S+TA + +V DE S PS +CRE W E A +
Sbjct: 124 ILTSSTAAVLFRQPPIEANDVVDETFFSDPS-------LCRETKNWYPLSKILAENAAWE 176
Query: 179 VNKD--VRLALIRIGIVLGK-DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235
KD + + ++ G + G L + L + F G +++ ++ + D+
Sbjct: 177 FAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDVALAH 236
Query: 236 YEALSNPSYRG--VING 250
+AL PS G +I+G
Sbjct: 237 IKALETPSANGRYIIDG 253
|
Length = 322 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.001
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 60
+ V GATG+ G +V+ H VR L R K+EL
Sbjct: 1 ILVFGATGYQGGSVVRASLKAGHPVRALVRD-PKSELA 37
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 39.5 bits (93), Expect = 0.001
Identities = 11/36 (30%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 25 VTGATGFIGRRLVQRL--QADNHQVRVLTRSRSKAE 58
+TGATGF+G+ L+++L ++ L R++
Sbjct: 1 LTGATGFLGKVLLEKLLRSTPEVKIYCLVRAKDGES 36
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.001
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Query: 25 VTGATGFIGRRLVQRL-QADNHQ-VRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQWR 81
VTG GF+GR +V+ L + Q VRV + F + + + ++ R
Sbjct: 2 VTGGGGFLGRHIVRLLLREGELQEVRVFDLRFSPELLEDFSKLQVITYIEGDVTDKQDLR 61
Query: 82 DCIQGSTAVVNLAG 95
+QGS V++ A
Sbjct: 62 RALQGSDVVIHTAA 75
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.3 bits (90), Expect = 0.003
Identities = 57/251 (22%), Positives = 102/251 (40%), Gaps = 38/251 (15%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTR---SRSKAELI--FPGKKTR--FFPGVMIA 75
V VTGA+GFIG LV+RL + VR R K + G K R F +
Sbjct: 1 VCVTGASGFIGSWLVKRLLQRGYTVRATVRDPGDEKKVAHLLELEGAKERLKLFK-ADLL 59
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135
+ + I G V ++A +P+ S + ++E+ E ++ T V++ ++ + V+
Sbjct: 60 DYGSFDAAIDGCDGVFHVA-SPV-DFDSEDPEEEMIEPAVKGTLNVLEACAKA-KSVKRV 116
Query: 136 VLV-SATALGYYGTSET-EVFDESSPSGNDYLAEVCREW-----------EGTALKVNKD 182
V S A+ + +V DES S D+ C++ E A + ++
Sbjct: 117 VFTSSVAAVVWNPNRGEGKVVDESCWSDLDF----CKKTKLWYALSKTLAEKAAWEFAEE 172
Query: 183 --VRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN---LI 235
+ L + +V+G + + + G + +H+DD+ + L+
Sbjct: 173 NGLDLVTVNPSLVVGPFLQPSLNSSSQLILSLLKGNAEMYQNGSLALVHVDDVADAHILL 232
Query: 236 YEALSNPSYRG 246
YE PS G
Sbjct: 233 YE---KPSASG 240
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178484 PLN02896, PLN02896, cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Score = 38.6 bits (90), Expect = 0.003
Identities = 23/84 (27%), Positives = 41/84 (48%), Gaps = 5/84 (5%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGV 72
+++ T VTGATG+IG LV+ L + V R +K+ + G + R F
Sbjct: 7 ESATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRAD 66
Query: 73 MIAEEPQWRDCIQGSTAVVNLAGT 96
+ EE + + ++G V ++A +
Sbjct: 67 L-QEEGSFDEAVKGCDGVFHVAAS 89
|
Length = 353 |
| >gnl|CDD|187564 cd05254, dTDP_HR_like_SDR_e, dTDP-6-deoxy-L-lyxo-4-hexulose reductase and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 38.0 bits (89), Expect = 0.004
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 60
+TGATG +GR LV+ L+ ++V RSR+ +
Sbjct: 4 ITGATGMLGRALVRLLKERGYEVIGTGRSRASLFKL 39
|
dTDP-6-deoxy-L-lyxo-4-hexulose reductase, an extended SDR, synthesizes dTDP-L-rhamnose from alpha-D-glucose-1-phosphate, providing the precursor of L-rhamnose, an essential cell wall component of many pathogenic bacteria. This subgroup has the characteristic active site tetrad and NADP-binding motif. This subgroup also contains human MAT2B, the regulatory subunit of methionine adenosyltransferase (MAT); MAT catalyzes S-adenosylmethionine synthesis. The human gene encoding MAT2B encodes two major splicing variants which are induced in human cell liver cancer and regulate HuR, an mRNA-binding protein which stabilizes the mRNA of several cyclins, to affect cell proliferation. Both MAT2B variants include this extended SDR domain. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 280 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 100.0 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 100.0 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 100.0 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 100.0 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 100.0 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 100.0 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 100.0 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 100.0 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 100.0 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 100.0 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 100.0 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 100.0 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 100.0 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 100.0 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 100.0 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 100.0 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 100.0 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 100.0 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 100.0 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 100.0 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 100.0 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 100.0 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 100.0 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 100.0 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 100.0 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 100.0 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 100.0 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 100.0 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 100.0 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 100.0 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 100.0 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 100.0 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 100.0 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 100.0 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 100.0 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 100.0 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 100.0 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 100.0 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 100.0 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 100.0 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 100.0 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 100.0 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 100.0 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 100.0 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.98 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.98 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.97 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.97 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.97 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.97 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.96 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.96 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.96 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.96 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.95 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.94 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.94 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.93 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.92 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.91 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.91 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.9 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.9 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.89 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.89 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.86 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.86 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.85 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.85 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.84 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.84 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.84 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.84 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.84 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.83 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.82 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.82 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.8 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.8 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.8 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.8 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.8 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.79 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.79 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.79 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.78 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.78 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.78 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.77 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.77 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.77 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.77 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.77 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.77 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.76 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.76 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.76 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.76 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.75 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.75 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.75 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.75 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.75 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.74 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.73 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.73 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.73 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.73 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.73 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.73 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.73 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.73 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.73 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.72 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.72 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.72 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.72 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.72 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.72 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.72 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.72 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.72 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.72 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.72 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.71 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.71 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.71 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.71 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.71 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.71 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.7 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.69 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.69 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.69 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.69 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.69 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.68 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.68 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.67 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.67 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.67 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.66 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.66 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.66 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.66 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.66 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.66 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.65 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.65 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.65 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.65 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.64 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.64 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.64 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.64 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.63 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.63 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.63 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.63 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.62 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.61 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.61 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.61 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.61 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.61 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.61 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.61 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.6 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.58 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.58 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.58 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.58 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.57 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.57 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.57 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.57 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.57 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.56 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.56 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.54 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.53 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.52 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.52 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.52 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.51 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.51 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.51 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.5 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.5 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.48 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.44 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.41 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.4 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.4 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.37 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.36 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.35 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.34 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.31 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.27 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.27 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.27 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.26 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.24 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.24 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.19 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.17 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.16 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.16 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 99.15 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.13 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.06 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.05 | |
| PLN00106 | 323 | malate dehydrogenase | 98.98 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.96 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 98.94 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 98.92 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 98.83 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 98.81 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.78 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.75 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.61 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.6 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.56 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.54 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 98.53 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 98.51 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.44 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.43 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.37 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 98.33 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.3 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.3 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 98.26 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 98.26 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.25 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 98.25 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 98.19 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.16 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 98.12 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 98.12 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.11 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.11 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 98.08 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 98.02 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 98.01 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.0 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 98.0 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 98.0 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.99 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.94 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.92 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.9 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.89 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.88 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.87 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.84 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.84 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.84 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 97.81 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.76 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.73 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 97.7 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.69 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.68 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.67 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 97.66 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 97.66 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 97.64 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.63 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 97.63 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 97.62 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.61 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.61 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.6 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 97.6 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 97.54 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.53 | |
| COG0289 | 266 | DapB Dihydrodipicolinate reductase [Amino acid tra | 97.53 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 97.52 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.49 | |
| COG0240 | 329 | GpsA Glycerol-3-phosphate dehydrogenase [Energy pr | 97.47 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 97.46 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.45 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.45 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 97.43 | |
| PRK07417 | 279 | arogenate dehydrogenase; Reviewed | 97.41 | |
| COG0136 | 334 | Asd Aspartate-semialdehyde dehydrogenase [Amino ac | 97.41 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.4 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 97.38 | |
| PF08338 | 48 | DUF1731: Domain of unknown function (DUF1731); Int | 97.38 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.35 | |
| PRK14619 | 308 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 97.35 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.35 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 97.34 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.33 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.29 | |
| PRK11880 | 267 | pyrroline-5-carboxylate reductase; Reviewed | 97.29 | |
| PRK06598 | 369 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.29 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 97.28 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.27 | |
| TIGR00872 | 298 | gnd_rel 6-phosphogluconate dehydrogenase (decarbox | 97.26 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.24 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.23 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 97.23 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.22 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 97.22 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 97.21 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.2 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 97.18 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.18 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 97.18 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 97.17 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.16 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 97.16 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.15 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 97.15 | |
| smart00859 | 122 | Semialdhyde_dh Semialdehyde dehydrogenase, NAD bin | 97.14 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.13 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 97.11 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.09 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 97.09 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.09 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 97.08 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 97.06 | |
| TIGR00036 | 266 | dapB dihydrodipicolinate reductase. | 97.05 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 97.05 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 97.05 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.04 | |
| TIGR01745 | 366 | asd_gamma aspartate-semialdehyde dehydrogenase, ga | 97.03 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 97.02 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 97.02 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 97.02 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 97.01 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 97.01 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.0 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 97.0 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 97.0 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.98 | |
| COG1712 | 255 | Predicted dinucleotide-utilizing enzyme [General f | 96.97 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.97 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 96.96 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 96.96 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.94 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 96.94 | |
| TIGR01851 | 310 | argC_other N-acetyl-gamma-glutamyl-phosphate reduc | 96.94 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.94 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.92 | |
| COG0287 | 279 | TyrA Prephenate dehydrogenase [Amino acid transpor | 96.91 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.89 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.87 | |
| PLN02688 | 266 | pyrroline-5-carboxylate reductase | 96.85 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.85 | |
| PRK06019 | 372 | phosphoribosylaminoimidazole carboxylase ATPase su | 96.83 | |
| PRK13304 | 265 | L-aspartate dehydrogenase; Reviewed | 96.82 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.79 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.79 | |
| PRK12491 | 272 | pyrroline-5-carboxylate reductase; Reviewed | 96.77 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.76 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 96.76 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.76 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 96.76 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.75 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 96.75 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.74 | |
| PRK15182 | 425 | Vi polysaccharide biosynthesis protein TviB; Provi | 96.73 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.73 | |
| PLN02256 | 304 | arogenate dehydrogenase | 96.71 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 96.71 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 96.7 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.69 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.69 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 96.69 | |
| PRK08818 | 370 | prephenate dehydrogenase; Provisional | 96.67 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 96.66 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 96.66 | |
| PRK06444 | 197 | prephenate dehydrogenase; Provisional | 96.65 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 96.62 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.62 | |
| PRK06545 | 359 | prephenate dehydrogenase; Validated | 96.62 | |
| KOG2018 | 430 | consensus Predicted dinucleotide-utilizing enzyme | 96.61 | |
| PRK12921 | 305 | 2-dehydropantoate 2-reductase; Provisional | 96.58 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.58 | |
| PRK08223 | 287 | hypothetical protein; Validated | 96.58 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.55 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.55 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 96.54 | |
| PRK06928 | 277 | pyrroline-5-carboxylate reductase; Reviewed | 96.54 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 96.53 | |
| COG2099 | 257 | CobK Precorrin-6x reductase [Coenzyme metabolism] | 96.52 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.52 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.5 | |
| PRK07680 | 273 | late competence protein ComER; Validated | 96.5 | |
| PRK05808 | 282 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.5 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.5 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.49 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 96.49 | |
| PF13950 | 62 | Epimerase_Csub: UDP-glucose 4-epimerase C-term sub | 96.49 | |
| PRK06901 | 322 | aspartate-semialdehyde dehydrogenase; Provisional | 96.48 | |
| PRK06249 | 313 | 2-dehydropantoate 2-reductase; Provisional | 96.48 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 96.47 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 96.46 | |
| COG0026 | 375 | PurK Phosphoribosylaminoimidazole carboxylase (NCA | 96.46 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 96.46 | |
| PRK14194 | 301 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.46 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 96.45 | |
| PRK12439 | 341 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.45 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.44 | |
| PF02882 | 160 | THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl | 96.43 | |
| PRK08229 | 341 | 2-dehydropantoate 2-reductase; Provisional | 96.42 | |
| PRK13303 | 265 | L-aspartate dehydrogenase; Provisional | 96.4 | |
| PRK09288 | 395 | purT phosphoribosylglycinamide formyltransferase 2 | 96.4 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 96.4 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 96.39 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 96.38 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 96.38 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 96.37 | |
| PRK07679 | 279 | pyrroline-5-carboxylate reductase; Reviewed | 96.36 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 96.36 | |
| PRK14620 | 326 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.36 | |
| PRK04207 | 341 | glyceraldehyde-3-phosphate dehydrogenase; Provisio | 96.35 |
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-46 Score=297.69 Aligned_cols=292 Identities=48% Similarity=0.827 Sum_probs=265.2
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-CCCEEEECCCCCCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTPIGTR 101 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a~~~~~~~ 101 (325)
|+|||||||||++|+..|.+.||+|++++|++.+....... .+..-+.+.+... ++|+|||+||.+....
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~~---------~v~~~~~~~~~~~~~~DavINLAG~~I~~r 71 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLHP---------NVTLWEGLADALTLGIDAVINLAGEPIAER 71 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcCc---------cccccchhhhcccCCCCEEEECCCCccccc
Confidence 68999999999999999999999999999999776554331 1113344445544 7999999999986655
Q ss_pred -CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHHHhhc
Q 020476 102 -WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN 180 (325)
Q Consensus 102 -~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~ 180 (325)
|+.+.++.+.+.-+..|..|+++..+ ...++-+++|.++++.||...+..++|++++..++.++.+..||.+....+
T Consensus 72 rWt~~~K~~i~~SRi~~T~~L~e~I~~--~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fla~lc~~WE~~a~~a~ 149 (297)
T COG1090 72 RWTEKQKEEIRQSRINTTEKLVELIAA--SETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFLAQLCQDWEEEALQAQ 149 (297)
T ss_pred cCCHHHHHHHHHHHhHHHHHHHHHHHh--ccCCCcEEEecceEEEecCCCceeeecCCCCCCChHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999997 456677899999999999999999999999999999999999999888876
Q ss_pred C-CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHH
Q 020476 181 K-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259 (325)
Q Consensus 181 ~-~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (325)
. |.+++++|.|.|.++.++.+..+.+.++...|+++++|.+.++|||++|+++++..++++....|.||++.++|++..
T Consensus 150 ~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~lsGp~N~taP~PV~~~ 229 (297)
T COG1090 150 QLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQLSGPFNLTAPNPVRNK 229 (297)
T ss_pred hcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcCCCCcccccCCCcCcHH
Confidence 6 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 260 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
+|...+++.++++..+++|........|+.....+.+++.-++|+...||+++|++++++|.+++.
T Consensus 230 ~F~~al~r~l~RP~~~~vP~~~~rl~LGe~a~~lL~gQrvlP~kl~~aGF~F~y~dl~~AL~~il~ 295 (297)
T COG1090 230 EFAHALGRALHRPAILPVPSFALRLLLGEMADLLLGGQRVLPKKLEAAGFQFQYPDLEEALADILK 295 (297)
T ss_pred HHHHHHHHHhCCCccccCcHHHHHHHhhhhHHHHhccchhhHHHHHHCCCeeecCCHHHHHHHHHh
Confidence 999999999999999999999999999999988999999999999999999999999999998763
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-44 Score=288.71 Aligned_cols=289 Identities=21% Similarity=0.263 Sum_probs=235.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|+||||||.||||+|.+.+|++.|++|++++.-............ ..+...|+.|.+.+.++++ ++|+|||+||..
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~~- 78 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKLQ-FKFYEGDLLDRALLTAVFEENKIDAVVHFAASI- 78 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhcc-CceEEeccccHHHHHHHHHhcCCCEEEECcccc-
Confidence 699999999999999999999999999999986654332222100 1266789999999999996 799999999965
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~ 175 (325)
.+..+...+..+++.|+.+|.+|+++|++ .+++++||-||+.+ ||.+...|++|+.|. .++| .+|...|.+..
T Consensus 79 ~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~--~gv~~~vFSStAav--YG~p~~~PI~E~~~~~p~NPYG~sKlm~E~iL~ 154 (329)
T COG1087 79 SVGESVQNPLKYYDNNVVGTLNLIEAMLQ--TGVKKFIFSSTAAV--YGEPTTSPISETSPLAPINPYGRSKLMSEEILR 154 (329)
T ss_pred ccchhhhCHHHHHhhchHhHHHHHHHHHH--hCCCEEEEecchhh--cCCCCCcccCCCCCCCCCCcchhHHHHHHHHHH
Confidence 45556778999999999999999999999 89999999999999 999999999999985 4578 89999999999
Q ss_pred HHhhcCCceEEEEEeceEEcCCC--------CcccchHHHH-HHHcCCC-----------CCCCcceeeeccHHHHHHHH
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDG--------GALAKMIPLF-MMFAGGP-----------LGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~--------~~~~~~~~~~-~~~~~~~-----------~~~~~~~~~~v~v~D~a~a~ 235 (325)
.+.+..+++++++|..++.|... .....+++.. +...|+. ..+|...||+|||.|+|++.
T Consensus 155 d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH 234 (329)
T COG1087 155 DAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIRDYIHVDDLADAH 234 (329)
T ss_pred HHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeeeeeeehhHHHHHH
Confidence 99998999999999999999742 1224556666 3333332 25889999999999999999
Q ss_pred HHHHcC---CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcc
Q 020476 236 YEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK 312 (325)
Q Consensus 236 ~~~~~~---~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~ 312 (325)
+.+++. +....+||+++|.-.|+.|+++.+.+..|++ +|-.......|+++..+.++.++ .++|||+|+
T Consensus 235 ~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~----ip~~~~~RR~GDpa~l~Ad~~kA----~~~Lgw~p~ 306 (329)
T COG1087 235 VLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRD----IPVEIAPRRAGDPAILVADSSKA----RQILGWQPT 306 (329)
T ss_pred HHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCc----CceeeCCCCCCCCceeEeCHHHH----HHHhCCCcc
Confidence 999864 2233599999999999999999999999965 34444445567777666655554 457999999
Q ss_pred cccHHHHHHHH
Q 020476 313 YRYVKDALKAI 323 (325)
Q Consensus 313 ~~~~~~~l~~~ 323 (325)
++++++++++.
T Consensus 307 ~~~L~~ii~~a 317 (329)
T COG1087 307 YDDLEDIIKDA 317 (329)
T ss_pred cCCHHHHHHHH
Confidence 98899998865
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-42 Score=302.76 Aligned_cols=300 Identities=14% Similarity=0.112 Sum_probs=220.7
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----C---C--CCccccCceeecCCchhHhhhCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----P---G--KKTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~---~--~~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
.-..+|||||||||||||++|+++|+++|++|++++|......... . . .....+..+|+.|.+.+.+++++
T Consensus 11 ~~~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~~~~~ 90 (348)
T PRK15181 11 LVLAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRKFTDCQKACKN 90 (348)
T ss_pred ccccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhhC
Confidence 3345689999999999999999999999999999998653211100 0 0 00011345788898899999999
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY 164 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y 164 (325)
+|+|||+|+.... .....++...+++|+.++.+++++|++ .+++++||+||.++ ||...+.+..|+++. ...|
T Consensus 91 ~d~ViHlAa~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y 165 (348)
T PRK15181 91 VDYVLHQAALGSV-PRSLKDPIATNSANIDGFLNMLTAARD--AHVSSFTYAASSST--YGDHPDLPKIEERIGRPLSPY 165 (348)
T ss_pred CCEEEECccccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeechHh--hCCCCCCCCCCCCCCCCCChh
Confidence 9999999996432 223345667899999999999999999 78899999999998 997666666666543 3467
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~ 235 (325)
.+|...|.....+....+++++++||+++|||++.+. ..+++.+ +...+.++ +++.+.++|+|++|+|+++
T Consensus 166 ~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~ 245 (348)
T PRK15181 166 AVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQAN 245 (348)
T ss_pred hHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHH
Confidence 7888888887777777799999999999999975332 2334433 44555554 7788999999999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCc
Q 020476 236 YEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF 311 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p 311 (325)
+.++..+. .+++||+++++++|++|+++.+.+.++......... .. ..............++++|+++ +||.|
T Consensus 246 ~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~d~~k~~~~lGw~P 322 (348)
T PRK15181 246 LLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNLWRNEQSRA-EP--IYKDFRDGDVKHSQADITKIKTFLSYEP 322 (348)
T ss_pred HHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCcccccccCC-Cc--ccCCCCCCcccccccCHHHHHHHhCCCC
Confidence 98776432 356999999999999999999999987431100000 00 0011111112235677888865 99999
Q ss_pred ccccHHHHHHHHh
Q 020476 312 KYRYVKDALKAIM 324 (325)
Q Consensus 312 ~~~~~~~~l~~~~ 324 (325)
++ +++|+|++++
T Consensus 323 ~~-sl~egl~~~~ 334 (348)
T PRK15181 323 EF-DIKEGLKQTL 334 (348)
T ss_pred CC-CHHHHHHHHH
Confidence 99 5999999986
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-41 Score=270.66 Aligned_cols=293 Identities=18% Similarity=0.185 Sum_probs=232.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecC-----CCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRS-----RSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~-----~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi 91 (325)
|++|||||.||||+.+++++++.. .+|+.++.- ......+.... ...+.++|+.|.+.+.++++ ++|+|+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~~~~~~~-~~~fv~~DI~D~~~v~~~~~~~~~D~Vv 79 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLADVEDSP-RYRFVQGDICDRELVDRLFKEYQPDAVV 79 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHHhhhcCC-CceEEeccccCHHHHHHHHHhcCCCeEE
Confidence 689999999999999999999874 357777752 11111111110 11267889999999999997 699999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCc--eecCCCCC--CCch-H
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE--VFDESSPS--GNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~--~~~e~~~~--~~~y-~ 165 (325)
|+|+-. .++.+-..+..+.++|+.||.+||+++++. .. -||+++||..| ||+-... .++|++|. .++| .
T Consensus 80 hfAAES-HVDRSI~~P~~Fi~TNv~GT~~LLEaar~~--~~~frf~HISTDEV--YG~l~~~~~~FtE~tp~~PsSPYSA 154 (340)
T COG1088 80 HFAAES-HVDRSIDGPAPFIQTNVVGTYTLLEAARKY--WGKFRFHHISTDEV--YGDLGLDDDAFTETTPYNPSSPYSA 154 (340)
T ss_pred Eechhc-cccccccChhhhhhcchHHHHHHHHHHHHh--cccceEEEeccccc--cccccCCCCCcccCCCCCCCCCcch
Confidence 999976 356667788999999999999999999994 33 48999999999 9976654 68999984 5578 8
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|.....+...+...+|++++|.|+++-|||... ..+++|.. +...|.++ |+|.+.|||+||+|-|+|+..++.
T Consensus 155 SKAasD~lVray~~TYglp~~ItrcSNNYGPyqf-pEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~ 233 (340)
T COG1088 155 SKAASDLLVRAYVRTYGLPATITRCSNNYGPYQF-PEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLT 233 (340)
T ss_pred hhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcC-chhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHh
Confidence 8999999999999999999999999999999753 34667766 67778775 899999999999999999999999
Q ss_pred CCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHH-HHcCCCcccccHHHH
Q 020476 241 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDA 319 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lg~~p~~~~~~~~ 319 (325)
+++.+.+||++++...+-.|+++.|.+.+|+...- -...+. +-...+.....+.++++|+ ++|||.|.+ +|+++
T Consensus 234 kg~~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~~--~~~li~--~V~DRpGHD~RYaid~~Ki~~eLgW~P~~-~fe~G 308 (340)
T COG1088 234 KGKIGETYNIGGGNERTNLEVVKTICELLGKDKPD--YRDLIT--FVEDRPGHDRRYAIDASKIKRELGWRPQE-TFETG 308 (340)
T ss_pred cCcCCceEEeCCCccchHHHHHHHHHHHhCccccc--hhhheE--eccCCCCCccceeechHHHhhhcCCCcCC-CHHHH
Confidence 99988899999999999999999999999986431 000000 1111122233456667775 789999998 69999
Q ss_pred HHHHhC
Q 020476 320 LKAIMS 325 (325)
Q Consensus 320 l~~~~~ 325 (325)
|+++++
T Consensus 309 lrkTv~ 314 (340)
T COG1088 309 LRKTVD 314 (340)
T ss_pred HHHHHH
Confidence 999874
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-40 Score=283.03 Aligned_cols=289 Identities=49% Similarity=0.838 Sum_probs=216.6
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC-CC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG-TR 101 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~-~~ 101 (325)
||||||+||||+++++.|++.|++|++++|++.+....... .++..+.+.+.+.+.++|+|||||+.... .+
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~D~Vvh~a~~~~~~~~ 73 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWE-------GYKPWAPLAESEALEGADAVINLAGEPIADKR 73 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcccce-------eeecccccchhhhcCCCCEEEECCCCCccccc
Confidence 69999999999999999999999999999988664332211 11112224555667899999999996532 33
Q ss_pred CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC-CCchHHHHHHHHHHHHHh-h
Q 020476 102 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-GNDYLAEVCREWEGTALK-V 179 (325)
Q Consensus 102 ~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~-~~~y~~k~~~~~~~~~~~-~ 179 (325)
+.......+++.|+.++.+++++|++ .++++.++++++.+..||.....+++|+.++ ...|..+...+++..... .
T Consensus 74 ~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~~~~~~~~e~~~~~~~ 151 (292)
T TIGR01777 74 WTEERKQEIRDSRIDTTRALVEAIAA--AEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFLAELCRDWEEAAQAAE 151 (292)
T ss_pred CCHHHHHHHHhcccHHHHHHHHHHHh--cCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChHHHHHHHHHHHhhhch
Confidence 55556778889999999999999998 5654444444433333887666678888744 334544444444433322 2
Q ss_pred cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHH
Q 020476 180 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (325)
+.+++++++||+.+||++++....+...+....+.++++++..++++|++|+|+++..+++++...++||+++++++|+.
T Consensus 152 ~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~~~g~~~~~~~~~~s~~ 231 (292)
T TIGR01777 152 DLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENASISGPVNATAPEPVRNK 231 (292)
T ss_pred hcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcccCCceEecCCCccCHH
Confidence 35899999999999999754333333333333344567788999999999999999999988766789999999999999
Q ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHH
Q 020476 260 EMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320 (325)
Q Consensus 260 e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l 320 (325)
|+++.+++.+|++..+++|.+......+..+.....+.+++++|++++||+|+|++++|++
T Consensus 232 di~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 292 (292)
T TIGR01777 232 EFAKALARALHRPAFFPVPAFVLRALLGEMADLLLKGQRVLPEKLLEAGFQFQYPDLDEAL 292 (292)
T ss_pred HHHHHHHHHhCCCCcCcCCHHHHHHHhchhhHHHhCCcccccHHHHhcCCeeeCcChhhcC
Confidence 9999999999988777889888776666555555668889999999999999998788864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-40 Score=274.00 Aligned_cols=292 Identities=23% Similarity=0.287 Sum_probs=221.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc------cCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
++|+|+|||||||||+||++.|+++||.|++++|+++..+. +............|+.|++++.+++++||.|||
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~sf~~ai~gcdgVfH 84 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEGSFDKAIDGCDGVFH 84 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccchHHHHHhCCCEEEE
Confidence 46799999999999999999999999999999999887322 221111122446899999999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeec---CCCCceecCCCCCCC-------
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG---TSETEVFDESSPSGN------- 162 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g---~~~~~~~~e~~~~~~------- 162 (325)
+|.+..... .++..++.+..++|+.|++++|++. ..++|+||+||.++..+. ..++..++|+.+...
T Consensus 85 ~Asp~~~~~--~~~e~~li~pav~Gt~nVL~ac~~~-~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd~~~~~~~~ 161 (327)
T KOG1502|consen 85 TASPVDFDL--EDPEKELIDPAVKGTKNVLEACKKT-KSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSDLDFCRCKK 161 (327)
T ss_pred eCccCCCCC--CCcHHhhhhHHHHHHHHHHHHHhcc-CCcceEEEeccHHHhccCCcCCCCCcccccccCCcHHHHHhhH
Confidence 999753322 2255689999999999999999995 359999999998875333 233446888887544
Q ss_pred -ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 -DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 -~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|..+|...+.+.++.+++.+.+-|+.|+||...+. ......+....|..-........++|++|+|.|.+.+
T Consensus 162 ~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrDVA~AHv~a 241 (327)
T KOG1502|consen 162 LWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRDVALAHVLA 241 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHHHHHHHHHH
Confidence 35 8899999999999999999999999999999975442 2233344555553322333345599999999999999
Q ss_pred HcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcC-CCcccccHH
Q 020476 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELG-FPFKYRYVK 317 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg-~~p~~~~~~ 317 (325)
++++...|.|.+.++. .++.|+++.+.+.+.... +|..... .........+++++|.+++| |+++ +++
T Consensus 242 ~E~~~a~GRyic~~~~-~~~~ei~~~l~~~~P~~~---ip~~~~~-----~~~~~~~~~~~~~~k~k~lg~~~~~--~l~ 310 (327)
T KOG1502|consen 242 LEKPSAKGRYICVGEV-VSIKEIADILRELFPDYP---IPKKNAE-----EHEGFLTSFKVSSEKLKSLGGFKFR--PLE 310 (327)
T ss_pred HcCcccCceEEEecCc-ccHHHHHHHHHHhCCCCC---CCCCCCc-----cccccccccccccHHHHhcccceec--ChH
Confidence 9999999999888776 669999999999886432 2222111 11112333467889999988 7666 799
Q ss_pred HHHHHHh
Q 020476 318 DALKAIM 324 (325)
Q Consensus 318 ~~l~~~~ 324 (325)
|.+.+++
T Consensus 311 e~~~dt~ 317 (327)
T KOG1502|consen 311 ETLSDTV 317 (327)
T ss_pred HHHHHHH
Confidence 9999886
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=289.04 Aligned_cols=296 Identities=18% Similarity=0.241 Sum_probs=210.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCC-----CccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGK-----KTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+|||||||||||||++|+++|+++ |++|++++|+..+...+.... ....+..+|+.|.+.+.++++++|+|||
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~d~ViH 92 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKHDSRLEGLIKMADLTIN 92 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCChHHHHHHhhcCCEEEE
Confidence 4579999999999999999999998 599999998765432221110 0112445788899999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC-------------
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP------------- 159 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~------------- 159 (325)
+|+......+. ..+.+.+..|+.++.+++++|++ .+ +++||+||..+ ||...+.+.+|+.|
T Consensus 93 lAa~~~~~~~~-~~~~~~~~~n~~gt~~ll~aa~~--~~-~r~v~~SS~~v--Yg~~~~~~~~e~~p~~~~~~~~~~~e~ 166 (386)
T PLN02427 93 LAAICTPADYN-TRPLDTIYSNFIDALPVVKYCSE--NN-KRLIHFSTCEV--YGKTIGSFLPKDHPLRQDPAFYVLKED 166 (386)
T ss_pred cccccChhhhh-hChHHHHHHHHHHHHHHHHHHHh--cC-CEEEEEeeeee--eCCCcCCCCCccccccccccccccccc
Confidence 99965332222 23345566899999999999998 55 89999999998 98643322222211
Q ss_pred -----------CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc----------ccchHHHH--HHHcCCC
Q 020476 160 -----------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGP 215 (325)
Q Consensus 160 -----------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~----------~~~~~~~~--~~~~~~~ 215 (325)
+...| .+|...|.....+....+++++++||+++||++... ...++..+ ....+.+
T Consensus 167 ~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 246 (386)
T PLN02427 167 ESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREP 246 (386)
T ss_pred ccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHHHHHhcCCC
Confidence 12357 788888888877777779999999999999997421 12233322 3445555
Q ss_pred C---CCCcceeeeccHHHHHHHHHHHHcCCC--CCceEEeeCC-CCCCHHHHHHHHHHHhCCCCCC--------CccHHH
Q 020476 216 L---GSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWL--------PVPEFA 281 (325)
Q Consensus 216 ~---~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~~~--------~~~~~~ 281 (325)
+ +++.+.++|+|++|+|++++.+++++. .+++||++++ +++|+.|+++.+.+.+|..... ..+...
T Consensus 247 ~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~ 326 (386)
T PLN02427 247 LKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAKVSGEPALEEPTVDVSSKE 326 (386)
T ss_pred eEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhccccccccccccccccCccc
Confidence 4 667888999999999999999998763 3459999997 5899999999999999852111 111100
Q ss_pred HHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 282 LKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
. .............+.+|+++ |||+|++ +++++|+++++
T Consensus 327 ~----~~~~~~~~~~~~~d~~k~~~~lGw~p~~-~l~~gl~~~~~ 366 (386)
T PLN02427 327 F----YGEGYDDSDKRIPDMTIINKQLGWNPKT-SLWDLLESTLT 366 (386)
T ss_pred c----cCccccchhhccCCHHHHHHhcCCCcCc-cHHHHHHHHHH
Confidence 0 00000112234557788864 8999999 59999999863
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=291.64 Aligned_cols=286 Identities=16% Similarity=0.197 Sum_probs=212.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-ccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..|||||||||||||++|+++|+++|++|++++|...... ....... ...+++.+.|.+...+.++|+|||+|+..
T Consensus 119 ~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~---~~~~~~~~~Di~~~~~~~~D~ViHlAa~~ 195 (436)
T PLN02166 119 KRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFG---NPRFELIRHDVVEPILLEVDQIYHLACPA 195 (436)
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhcc---CCceEEEECccccccccCCCEEEECceec
Confidence 3479999999999999999999999999999998643211 1111000 12355555565656677899999999864
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC-----CC--CCch-HHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC 169 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-----~~--~~~y-~~k~~ 169 (325)
.... ...++...++.|+.++.+++++|++ .+ .++||+||.++ ||.....+.+|+. |. .+.| .+|..
T Consensus 196 ~~~~-~~~~p~~~~~~Nv~gT~nLleaa~~--~g-~r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~p~~p~s~Yg~SK~~ 269 (436)
T PLN02166 196 SPVH-YKYNPVKTIKTNVMGTLNMLGLAKR--VG-ARFLLTSTSEV--YGDPLEHPQKETYWGNVNPIGERSCYDEGKRT 269 (436)
T ss_pred cchh-hccCHHHHHHHHHHHHHHHHHHHHH--hC-CEEEEECcHHH--hCCCCCCCCCccccccCCCCCCCCchHHHHHH
Confidence 3322 2335678899999999999999998 55 48999999999 9976666777763 32 3457 78888
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.|.....+....+++++++||+++||++... ...++..+ +...+.++ +++.+.++|+|++|+++++..+++.+
T Consensus 270 aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~- 348 (436)
T PLN02166 270 AETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDLVDGLVALMEGE- 348 (436)
T ss_pred HHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhcC-
Confidence 8888877777779999999999999997532 12333322 44445553 67888999999999999999999765
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA 322 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~ 322 (325)
..|+||+++++.+|+.|+++.+++.+|.+..+...... .+ ......++++|+++ |||+|++ +++++|++
T Consensus 349 ~~giyNIgs~~~~Si~ela~~I~~~~g~~~~i~~~p~~----~~-----~~~~~~~d~~Ka~~~LGw~P~~-sl~egl~~ 418 (436)
T PLN02166 349 HVGPFNLGNPGEFTMLELAEVVKETIDSSATIEFKPNT----AD-----DPHKRKPDISKAKELLNWEPKI-SLREGLPL 418 (436)
T ss_pred CCceEEeCCCCcEeHHHHHHHHHHHhCCCCCeeeCCCC----CC-----CccccccCHHHHHHHcCCCCCC-CHHHHHHH
Confidence 46799999999999999999999999976432221110 01 12334678888865 8999999 59999998
Q ss_pred Hh
Q 020476 323 IM 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 419 ~i 420 (436)
T PLN02166 419 MV 420 (436)
T ss_pred HH
Confidence 76
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=283.91 Aligned_cols=297 Identities=17% Similarity=0.223 Sum_probs=211.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeec-CCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
||+|||||||||||++|+++|++. |++|++++|+............ ..+..+|+. +.+.+.++++++|+|||+|+..
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dl~~~~~~~~~~~~~~d~ViH~aa~~ 79 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPR-MHFFEGDITINKEWIEYHVKKCDVILPLVAIA 79 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCC-eEEEeCCCCCCHHHHHHHHcCCCEEEECcccC
Confidence 579999999999999999999986 6999999987643322221111 114457886 5667778888999999999864
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---------CCch-HHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LAE 167 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---------~~~y-~~k 167 (325)
.... ...++...+++|+.++.+++++|++ .+ +++||+||..+ ||...+.+++|+.++ ...| .+|
T Consensus 80 ~~~~-~~~~p~~~~~~n~~~~~~ll~aa~~--~~-~~~v~~SS~~v--yg~~~~~~~~ee~~~~~~~~~~~p~~~Y~~sK 153 (347)
T PRK11908 80 TPAT-YVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCPDEEFDPEASPLVYGPINKPRWIYACSK 153 (347)
T ss_pred ChHH-hhcCcHHHHHHHHHHHHHHHHHHHh--cC-CeEEEEeccee--eccCCCcCcCccccccccCcCCCccchHHHHH
Confidence 3221 2345667889999999999999998 55 79999999988 987655566665431 2257 788
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-------ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHH
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~ 235 (325)
...|.....+....+++++++||+.+||++... ...+++.+ +...+.++ +++.+.++|+|++|+++++
T Consensus 154 ~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~ 233 (347)
T PRK11908 154 QLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDAL 233 (347)
T ss_pred HHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHH
Confidence 888888877777779999999999999997422 12233332 44456553 5678899999999999999
Q ss_pred HHHHcCCC---CCceEEeeCC-CCCCHHHHHHHHHHHhCCCCCCCc---c----HHHHHHHhCccceeeccCcccChhHH
Q 020476 236 YEALSNPS---YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSWLPV---P----EFALKAVLGEGAFVVLEGQRVVPARA 304 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~~~~k~ 304 (325)
+.+++++. .+++||++++ ..+|++|+++.+.+.+|..+.+.. + ........+.. .........+.+|+
T Consensus 234 ~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~ 312 (347)
T PRK11908 234 MKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPEYAESAKKVKLVETTSGAYYGKG-YQDVQNRVPKIDNT 312 (347)
T ss_pred HHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCcccccccccccccccCCchhccCcC-cchhccccCChHHH
Confidence 99998753 3569999997 479999999999999996432210 0 00000000000 00111223455666
Q ss_pred H-HcCCCcccccHHHHHHHHhC
Q 020476 305 K-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 305 ~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
+ .|||+|++ +++++|+++++
T Consensus 313 ~~~lGw~p~~-~l~~~l~~~~~ 333 (347)
T PRK11908 313 MQELGWAPKT-TMDDALRRIFE 333 (347)
T ss_pred HHHcCCCCCC-cHHHHHHHHHH
Confidence 5 69999999 59999998863
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-39 Score=282.54 Aligned_cols=286 Identities=19% Similarity=0.230 Sum_probs=211.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
++|+|+||||+||||+++++.|+++|++|++++|+.+... ..........+..+|+.|.+.+.++++++|+|||+
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vih~ 88 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQDYEALKAAIDGCDGVFHT 88 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCChHHHHHHHhcCCEEEEe
Confidence 4578999999999999999999999999999999765321 11100000113457889999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeee-eeeecCCCC---ceecCCCC--------CC
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA-LGYYGTSET---EVFDESSP--------SG 161 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~-v~~~g~~~~---~~~~e~~~--------~~ 161 (325)
|+.. ...+...+++|+.++.+++++|++ .+++++||+||.. + ||.... .+++|+++ +.
T Consensus 89 A~~~------~~~~~~~~~~nv~gt~~ll~aa~~--~~v~r~V~~SS~~av--yg~~~~~~~~~~~E~~~~~~~~~~~p~ 158 (342)
T PLN02214 89 ASPV------TDDPEQMVEPAVNGAKFVINAAAE--AKVKRVVITSSIGAV--YMDPNRDPEAVVDESCWSDLDFCKNTK 158 (342)
T ss_pred cCCC------CCCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeccceee--eccCCCCCCcccCcccCCChhhccccc
Confidence 9863 123567889999999999999998 7888999999964 5 874332 24677642 23
Q ss_pred Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
..| .+|...|.....+..+.+++++++||++|||++.... ..+...+....+.....++..++|+|++|+|++++.+
T Consensus 159 ~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva~a~~~a 238 (342)
T PLN02214 159 NWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVALAHVLV 238 (342)
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHHHHHHHH
Confidence 457 7898899888888777799999999999999975321 1122223334444433345678999999999999999
Q ss_pred HcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHH
Q 020476 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~ 318 (325)
++++..+|.||++++ ..++.|+++.+++.++.. ++|..... +. ........++++|+++|||+|+ +++|
T Consensus 239 l~~~~~~g~yn~~~~-~~~~~el~~~i~~~~~~~---~~~~~~~~---~~--~~~~~~~~~d~~k~~~LG~~p~--~lee 307 (342)
T PLN02214 239 YEAPSASGRYLLAES-ARHRGEVVEILAKLFPEY---PLPTKCKD---EK--NPRAKPYKFTNQKIKDLGLEFT--STKQ 307 (342)
T ss_pred HhCcccCCcEEEecC-CCCHHHHHHHHHHHCCCC---CCCCCCcc---cc--CCCCCccccCcHHHHHcCCccc--CHHH
Confidence 998766789999874 689999999999998632 11111000 00 0012234578888888999995 6999
Q ss_pred HHHHHhC
Q 020476 319 ALKAIMS 325 (325)
Q Consensus 319 ~l~~~~~ 325 (325)
+|+++++
T Consensus 308 ~i~~~~~ 314 (342)
T PLN02214 308 SLYDTVK 314 (342)
T ss_pred HHHHHHH
Confidence 9999863
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=283.62 Aligned_cols=287 Identities=18% Similarity=0.196 Sum_probs=210.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-cCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..|||||||||||||++|+++|+++|++|++++|....... ...... ..++++.+.|.+..++.++|+|||+|+..
T Consensus 118 ~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~---~~~~~~i~~D~~~~~l~~~D~ViHlAa~~ 194 (442)
T PLN02206 118 KGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFS---NPNFELIRHDVVEPILLEVDQIYHLACPA 194 (442)
T ss_pred CCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhcc---CCceEEEECCccChhhcCCCEEEEeeeec
Confidence 34799999999999999999999999999999875432111 100000 22355555555656667899999999865
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC-----CC--CCch-HHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PS--GNDY-LAEVC 169 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-----~~--~~~y-~~k~~ 169 (325)
.... ...++...+++|+.++.+++++|++ .+. ++||+||..+ ||.....+.+|+. |. .+.| .+|..
T Consensus 195 ~~~~-~~~~p~~~~~~Nv~gt~nLleaa~~--~g~-r~V~~SS~~V--Yg~~~~~p~~E~~~~~~~P~~~~s~Y~~SK~~ 268 (442)
T PLN02206 195 SPVH-YKFNPVKTIKTNVVGTLNMLGLAKR--VGA-RFLLTSTSEV--YGDPLQHPQVETYWGNVNPIGVRSCYDEGKRT 268 (442)
T ss_pred chhh-hhcCHHHHHHHHHHHHHHHHHHHHH--hCC-EEEEECChHH--hCCCCCCCCCccccccCCCCCccchHHHHHHH
Confidence 3222 2335678889999999999999998 564 8999999998 9876666666653 22 3457 78888
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.|.....+....+++++++||+++||++... ...+++.+ +...+.++ +++.+.++++|++|+|++++.+++.+
T Consensus 269 aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~- 347 (442)
T PLN02206 269 AETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDLVEGLMRLMEGE- 347 (442)
T ss_pred HHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHHHHHHHHHHhcC-
Confidence 8888777777679999999999999997421 12233222 34445553 67888999999999999999999765
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKA 322 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~ 322 (325)
..|+||+++++++|+.|+++.+++.+|.+..+...... .. ......++++|++ ++||+|++ +++|+|++
T Consensus 348 ~~g~yNIgs~~~~sl~Elae~i~~~~g~~~~i~~~p~~----~~-----~~~~~~~d~sKa~~~LGw~P~~-~l~egl~~ 417 (442)
T PLN02206 348 HVGPFNLGNPGEFTMLELAKVVQETIDPNAKIEFRPNT----ED-----DPHKRKPDITKAKELLGWEPKV-SLRQGLPL 417 (442)
T ss_pred CCceEEEcCCCceeHHHHHHHHHHHhCCCCceeeCCCC----CC-----CccccccCHHHHHHHcCCCCCC-CHHHHHHH
Confidence 46799999999999999999999999865332211100 00 1123456788886 59999999 59999998
Q ss_pred HhC
Q 020476 323 IMS 325 (325)
Q Consensus 323 ~~~ 325 (325)
+++
T Consensus 418 ~~~ 420 (442)
T PLN02206 418 MVK 420 (442)
T ss_pred HHH
Confidence 863
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-38 Score=279.12 Aligned_cols=301 Identities=17% Similarity=0.212 Sum_probs=214.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCccc--ccCC--CCCccccCceeecCCchhHhhhC--CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAE--LIFP--GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~--~~~~--~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~ 92 (325)
||+|||||||||||+++++.|+++|++|+++ +|...... .... ......+..+|+.|.+.+.++++ ++|+|||
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~Vih 80 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMSLAPVAQSERFAFEKVDICDRAELARVFTEHQPDCVMH 80 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhhhhhcccCCceEEEECCCcChHHHHHHHhhcCCCEEEE
Confidence 4699999999999999999999999876554 44322111 1111 00011234678999999999887 4999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC-------CCCCCCEEEEeeeeeeeecCCC--CceecCCCCC--C
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES-------PEGVRPSVLVSATALGYYGTSE--TEVFDESSPS--G 161 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-------~~~~~~~v~~Ss~~v~~~g~~~--~~~~~e~~~~--~ 161 (325)
|||.... ....+.+..++++|+.++.+++++|++. ..+++++|++||.++ ||... ..+++|+.+. .
T Consensus 81 ~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~E~~~~~p~ 157 (355)
T PRK10217 81 LAAESHV-DRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEV--YGDLHSTDDFFTETTPYAPS 157 (355)
T ss_pred CCcccCc-chhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhh--cCCCCCCCCCcCCCCCCCCC
Confidence 9996522 2233456789999999999999999752 124679999999998 88543 3357777653 4
Q ss_pred Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...|.....+.++.+++++++||+++|||+.... .+++.+ +...+.++ +++++.++|+|++|+++++
T Consensus 158 s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~ 236 (355)
T PRK10217 158 SPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPE-KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARAL 236 (355)
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcc-cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHH
Confidence 567 7888888888877777899999999999999986322 233332 34445543 7888999999999999999
Q ss_pred HHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCC-CCCccHHHHHHHhC--ccceeeccCcccChhHHH-HcCCCc
Q 020476 236 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLG--EGAFVVLEGQRVVPARAK-ELGFPF 311 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~k~~-~lg~~p 311 (325)
..+++.+..+++||+++++++|+.|+++.+++.+|+.. ..+.+......... ...+.......++++|++ +|||.|
T Consensus 237 ~~~~~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p 316 (355)
T PRK10217 237 YCVATTGKVGETYNIGGHNERKNLDVVETICELLEELAPNKPQGVAHYRDLITFVADRPGHDLRYAIDASKIARELGWLP 316 (355)
T ss_pred HHHHhcCCCCCeEEeCCCCcccHHHHHHHHHHHhcccccccccccccccccceecCCCCCCCcccccCHHHHHHhcCCCC
Confidence 99998765667999999999999999999999998642 11211100000000 000001123467888885 599999
Q ss_pred ccccHHHHHHHHhC
Q 020476 312 KYRYVKDALKAIMS 325 (325)
Q Consensus 312 ~~~~~~~~l~~~~~ 325 (325)
++ +++|+|+++++
T Consensus 317 ~~-~l~e~l~~~~~ 329 (355)
T PRK10217 317 QE-TFESGMRKTVQ 329 (355)
T ss_pred cC-cHHHHHHHHHH
Confidence 99 59999999863
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=278.55 Aligned_cols=290 Identities=18% Similarity=0.221 Sum_probs=212.2
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+.+..|+|||||||||||+++++.|+++||+|++++|........... ...+...|+.|.+.+.++++++|+|||+|+
T Consensus 17 ~~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~--~~~~~~~Dl~d~~~~~~~~~~~D~Vih~Aa 94 (370)
T PLN02695 17 WPSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMF--CHEFHLVDLRVMENCLKVTKGVDHVFNLAA 94 (370)
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccc--cceEEECCCCCHHHHHHHHhCCCEEEEccc
Confidence 344568999999999999999999999999999999865321111000 011345688888888888889999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC----ceecCCC--C--CCCch-HH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESS--P--SGNDY-LA 166 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~----~~~~e~~--~--~~~~y-~~ 166 (325)
..................|+.++.+++++|++ .++++|||+||..+ ||.... .++.|++ + +.+.| .+
T Consensus 95 ~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~--~~vk~~V~~SS~~v--Yg~~~~~~~~~~~~E~~~~p~~p~s~Yg~s 170 (370)
T PLN02695 95 DMGGMGFIQSNHSVIMYNNTMISFNMLEAARI--NGVKRFFYASSACI--YPEFKQLETNVSLKESDAWPAEPQDAYGLE 170 (370)
T ss_pred ccCCccccccCchhhHHHHHHHHHHHHHHHHH--hCCCEEEEeCchhh--cCCccccCcCCCcCcccCCCCCCCCHHHHH
Confidence 65322222223345567899999999999998 78899999999998 886532 2355543 2 34467 78
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCccc---chHHHH--HHHc-CCCC---CCCcceeeeccHHHHHHHHHH
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFA-GGPL---GSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~---~~~~~~--~~~~-~~~~---~~~~~~~~~v~v~D~a~a~~~ 237 (325)
|...|.....+....+++++++||+++||++..... .+.+.+ .... +.++ +++++.++|+|++|+++++..
T Consensus 171 K~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~i~v~D~a~ai~~ 250 (370)
T PLN02695 171 KLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSFTFIDECVEGVLR 250 (370)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeEEeHHHHHHHHHH
Confidence 888888777777778999999999999999653211 112122 2222 2333 788899999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHH-HcCCCccccc
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRY 315 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~ 315 (325)
+++.+ ..++||+++++++|++|+++.+.+..|.+..+ ..|.. .. ......+++|++ ++||+|++ +
T Consensus 251 ~~~~~-~~~~~nv~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~------~~-----~~~~~~d~sk~~~~lgw~p~~-~ 317 (370)
T PLN02695 251 LTKSD-FREPVNIGSDEMVSMNEMAEIALSFENKKLPIKHIPGP------EG-----VRGRNSDNTLIKEKLGWAPTM-R 317 (370)
T ss_pred HHhcc-CCCceEecCCCceeHHHHHHHHHHHhCCCCCceecCCC------CC-----ccccccCHHHHHHhcCCCCCC-C
Confidence 88775 46799999999999999999999999865322 11110 00 012346888886 48999999 5
Q ss_pred HHHHHHHHh
Q 020476 316 VKDALKAIM 324 (325)
Q Consensus 316 ~~~~l~~~~ 324 (325)
++++|++++
T Consensus 318 l~e~i~~~~ 326 (370)
T PLN02695 318 LKDGLRITY 326 (370)
T ss_pred HHHHHHHHH
Confidence 999999886
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=270.77 Aligned_cols=293 Identities=16% Similarity=0.151 Sum_probs=212.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc---CC-CC--CccccCceeecCCchhHhhhCCCCEEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP-GK--KTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~-~~--~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
...|+||||||+||||+++++.|+++|++|++++|+....... .. .. ....+..+|+.|.+.+.++++++|+||
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 82 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVF 82 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEE
Confidence 3457999999999999999999999999999999886542211 00 00 011234578999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC-----CCceecCCCCCC-----
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-----ETEVFDESSPSG----- 161 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~-----~~~~~~e~~~~~----- 161 (325)
|+|+... .....+.+...+++|+.++.+++++|.+. .+.+++|++||..+ |+.. ...+++|+.+..
T Consensus 83 h~A~~~~-~~~~~~~~~~~~~~n~~g~~~ll~a~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~~E~~~~~p~~~~ 158 (325)
T PLN02989 83 HTASPVA-ITVKTDPQVELINPAVNGTINVLRTCTKV-SSVKRVILTSSMAA--VLAPETKLGPNDVVDETFFTNPSFAE 158 (325)
T ss_pred EeCCCCC-CCCCCChHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecchhh--eecCCccCCCCCccCcCCCCchhHhc
Confidence 9999642 22334456788899999999999999873 24679999999876 5432 234567776643
Q ss_pred ---Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchH-HHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 162 ---NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ---~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...|.....+.+..+++++++||+++|||+......+. ..+ ....++... +...++|+|++|+|+++
T Consensus 159 ~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~-~~~~r~~i~v~Dva~a~ 237 (325)
T PLN02989 159 ERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPF-NTTHHRFVDVRDVALAH 237 (325)
T ss_pred ccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCC-CCcCcCeeEHHHHHHHH
Confidence 357 78888888888777777999999999999999754322222 222 333444332 23457899999999999
Q ss_pred HHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCccccc
Q 020476 236 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRY 315 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~ 315 (325)
+.+++.+...++||++ +..+|++|+++.+.+.++... +..+ ..+...........+++|+++|||.|++ +
T Consensus 238 ~~~l~~~~~~~~~ni~-~~~~s~~ei~~~i~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~k~~~lg~~p~~-~ 307 (325)
T PLN02989 238 VKALETPSANGRYIID-GPVVTIKDIENVLREFFPDLC-IADR-------NEDITELNSVTFNVCLDKVKSLGIIEFT-P 307 (325)
T ss_pred HHHhcCcccCceEEEe-cCCCCHHHHHHHHHHHCCCCC-CCCC-------CCCcccccccCcCCCHHHHHHcCCCCCC-C
Confidence 9999887666799996 457999999999999997421 1110 0111111112346678888889999999 5
Q ss_pred HHHHHHHHhC
Q 020476 316 VKDALKAIMS 325 (325)
Q Consensus 316 ~~~~l~~~~~ 325 (325)
++++|+++++
T Consensus 308 l~~gi~~~~~ 317 (325)
T PLN02989 308 TETSLRDTVL 317 (325)
T ss_pred HHHHHHHHHH
Confidence 9999999863
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-38 Score=275.28 Aligned_cols=298 Identities=17% Similarity=0.110 Sum_probs=214.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCC--------CCccccCceeecCCchhHhhhC--CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG--------KKTRFFPGVMIAEEPQWRDCIQ--GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~--------~~~~~~~~~d~~d~~~~~~~~~--~~d 88 (325)
|+||||||+||||++|+++|++.|++|++++|+++.. ...... .....+..+|+.|.+.+.++++ ++|
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d 80 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMKLHYGDLTDSSNLRRIIDEIKPT 80 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhccccccccceeEEEeccCCHHHHHHHHHhCCCC
Confidence 5899999999999999999999999999999986421 111000 0001244689999999999887 479
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC---CCEEEEeeeeeeeecCCCCceecCCCCC--CCc
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPS--GND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~---~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~ 163 (325)
+|||+|+.... ......+....++|+.++.+++++|++ .++ +++||+||..+ ||.....+.+|+.+. .+.
T Consensus 81 ~ViH~Aa~~~~-~~~~~~~~~~~~~n~~gt~~ll~a~~~--~~~~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~ 155 (343)
T TIGR01472 81 EIYNLAAQSHV-KVSFEIPEYTADVDGIGTLRLLEAVRT--LGLIKSVKFYQASTSEL--YGKVQEIPQNETTPFYPRSP 155 (343)
T ss_pred EEEECCccccc-chhhhChHHHHHHHHHHHHHHHHHHHH--hCCCcCeeEEEeccHHh--hCCCCCCCCCCCCCCCCCCh
Confidence 99999997532 222334566778899999999999998 444 38999999998 997666677787764 456
Q ss_pred h-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc--ccchHH-HH-HHHcCCC----CCCCcceeeeccHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a 234 (325)
| .+|...|.+...+....++++++.|+.++||++... ....+. .+ ....+.+ ++++.+.++|+|++|+|++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a 235 (343)
T TIGR01472 156 YAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEA 235 (343)
T ss_pred hHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHH
Confidence 7 789888888888877778999999999999986321 222222 22 3334442 2778899999999999999
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-C-------ccHHHHHH--HhCc--cceeeccCcccChh
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-P-------VPEFALKA--VLGE--GAFVVLEGQRVVPA 302 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~-------~~~~~~~~--~~~~--~~~~~~~~~~~~~~ 302 (325)
++.+++++. .++||+++++++|+.|+++.+++.+|++..+ . .|...... .... ..+........+.+
T Consensus 236 ~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 314 (343)
T TIGR01472 236 MWLMLQQDK-PDDYVIATGETHSVREFVEVSFEYIGKTLNWKDKGINEVGRCKETGKVHVEIDPRYFRPTEVDLLLGDAT 314 (343)
T ss_pred HHHHHhcCC-CccEEecCCCceeHHHHHHHHHHHcCCCcccccccccccccccccCceeEEeCccccCCCccchhcCCHH
Confidence 999998764 5799999999999999999999999965211 0 00000000 0000 01111222345778
Q ss_pred HHH-HcCCCcccccHHHHHHHHhC
Q 020476 303 RAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 303 k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
|++ ++||+|++ +++|+|+++++
T Consensus 315 k~~~~lgw~p~~-~l~egi~~~~~ 337 (343)
T TIGR01472 315 KAKEKLGWKPEV-SFEKLVKEMVE 337 (343)
T ss_pred HHHHhhCCCCCC-CHHHHHHHHHH
Confidence 886 58999999 59999999874
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=269.93 Aligned_cols=291 Identities=20% Similarity=0.253 Sum_probs=208.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc---CC---CCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
..++|+||||+||||++++++|+++|++|+++.|+....... .. ......+..+|+.|.+.+.++++++|+|||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih 83 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH 83 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence 347999999999999999999999999999999987542211 00 000112445788999999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC---CCceecCCCCC--------C
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPS--------G 161 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~---~~~~~~e~~~~--------~ 161 (325)
+|+..... ..+.....+++|+.++.++++++++. .+++|+||+||.++..|+.. .+.+++|+++. .
T Consensus 84 ~A~~~~~~--~~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~p~~~~~~~ 160 (322)
T PLN02986 84 TASPVFFT--VKDPQTELIDPALKGTINVLNTCKET-PSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSDPSLCRETK 160 (322)
T ss_pred eCCCcCCC--CCCchhhhhHHHHHHHHHHHHHHHhc-CCccEEEEecchhheecCCccCCCCCCcCcccCCChHHhhccc
Confidence 99864211 12233467889999999999999872 26789999999876324432 23356676542 2
Q ss_pred Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccc-hHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
..| .+|...|...+.+.++.+++++++||+++||+....... ..... ....+.+.. +.+.++|+|++|+|++++.+
T Consensus 161 ~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~v~v~Dva~a~~~a 239 (322)
T PLN02986 161 NWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLF-NNRFYRFVDVRDVALAHIKA 239 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCC-CCcCcceeEHHHHHHHHHHH
Confidence 457 789888888888877789999999999999997432211 11112 333444432 34568999999999999999
Q ss_pred HcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHH
Q 020476 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~ 318 (325)
++++...++||++ +..+|+.|+++.+.+.++... ++.... .+.. ......++++|+++|||+|+ +++|
T Consensus 240 l~~~~~~~~yni~-~~~~s~~e~~~~i~~~~~~~~-~~~~~~-----~~~~---~~~~~~~d~~~~~~lg~~~~--~l~e 307 (322)
T PLN02986 240 LETPSANGRYIID-GPIMSVNDIIDILRELFPDLC-IADTNE-----ESEM---NEMICKVCVEKVKNLGVEFT--PMKS 307 (322)
T ss_pred hcCcccCCcEEEe-cCCCCHHHHHHHHHHHCCCCC-CCCCCc-----cccc---cccCCccCHHHHHHcCCccc--CHHH
Confidence 9987766799995 557999999999999987321 111100 0110 11113477888889999997 6999
Q ss_pred HHHHHhC
Q 020476 319 ALKAIMS 325 (325)
Q Consensus 319 ~l~~~~~ 325 (325)
+|+++++
T Consensus 308 ~~~~~~~ 314 (322)
T PLN02986 308 SLRDTIL 314 (322)
T ss_pred HHHHHHH
Confidence 9999863
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-38 Score=270.41 Aligned_cols=271 Identities=17% Similarity=0.235 Sum_probs=205.7
Q ss_pred EEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCCCCC
Q 020476 24 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPIGTR 101 (325)
Q Consensus 24 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~~~~ 101 (325)
||||||||||++|++.|++.|++|+++.+. ..+|+.|.+.+.++++ ++|+|||||+......
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~----------------~~~Dl~~~~~l~~~~~~~~~d~Vih~A~~~~~~~ 64 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTH----------------KELDLTRQADVEAFFAKEKPTYVILAAAKVGGIH 64 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeecc----------------ccCCCCCHHHHHHHHhccCCCEEEEeeeeecccc
Confidence 699999999999999999999988766432 1378899999988876 5899999998643222
Q ss_pred CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC----CCCC---ch-HHHHHHHHH
Q 020476 102 WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAEVCREWE 173 (325)
Q Consensus 102 ~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~----~~~~---~y-~~k~~~~~~ 173 (325)
.....+.+.++.|+.++.+++++|++ .+++++||+||+.+ ||.....+++|++ +..+ .| .+|...|..
T Consensus 65 ~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~~e~~ 140 (306)
T PLN02725 65 ANMTYPADFIRENLQIQTNVIDAAYR--HGVKKLLFLGSSCI--YPKFAPQPIPETALLTGPPEPTNEWYAIAKIAGIKM 140 (306)
T ss_pred hhhhCcHHHHHHHhHHHHHHHHHHHH--cCCCeEEEeCceee--cCCCCCCCCCHHHhccCCCCCCcchHHHHHHHHHHH
Confidence 23345667889999999999999999 68889999999998 9976667788865 3222 37 778888877
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCc-------ccchHHHH--HHHcCCCC----CCCcceeeeccHHHHHHHHHHHHc
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~-------~~~~~~~~--~~~~~~~~----~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
...+.+..+++++++||+.+||++... ...++..+ ....+.++ +++.+.++++|++|+++++..+++
T Consensus 141 ~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~ 220 (306)
T PLN02725 141 CQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMR 220 (306)
T ss_pred HHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHh
Confidence 776766679999999999999997531 11122221 12234432 567888999999999999999998
Q ss_pred CCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHH
Q 020476 241 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l 320 (325)
.....+.||+++++++|+.|+++.+++.++.+..+..... . ........++++|++++||+|++ +++++|
T Consensus 221 ~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~-------~--~~~~~~~~~d~~k~~~lg~~p~~-~~~~~l 290 (306)
T PLN02725 221 RYSGAEHVNVGSGDEVTIKELAELVKEVVGFEGELVWDTS-------K--PDGTPRKLMDSSKLRSLGWDPKF-SLKDGL 290 (306)
T ss_pred ccccCcceEeCCCCcccHHHHHHHHHHHhCCCCceeecCC-------C--CCcccccccCHHHHHHhCCCCCC-CHHHHH
Confidence 7655678999999999999999999999986532211100 0 00011245678888889999999 599999
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
++++
T Consensus 291 ~~~~ 294 (306)
T PLN02725 291 QETY 294 (306)
T ss_pred HHHH
Confidence 9876
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=271.80 Aligned_cols=291 Identities=21% Similarity=0.242 Sum_probs=206.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---C-C--CccccCceeecCCchhHhhhCCCCEEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---G-K--KTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~-~--~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
+..++||||||+||||++++++|+++|++|++++|+......... . . ....+...|+.|.+.+.++++++|+||
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~~~~~~~~~d~Vi 82 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDLPGATTRLTLWKADLAVEGSFDDAIRGCTGVF 82 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhccCCCCceEEEEecCCChhhHHHHHhCCCEEE
Confidence 456799999999999999999999999999999997654322100 0 0 001134578889999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCC-CCce-ecCCCC---------
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS-ETEV-FDESSP--------- 159 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~-~~~~-~~e~~~--------- 159 (325)
|+|+.... ...+.....+++|+.++.+++++|++ .+ +++|||+||.++ |+.. ...+ ++|+.+
T Consensus 83 H~A~~~~~--~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~r~v~~SS~~~--~~~~~~~~~~~~E~~~~~~~~~~~~ 156 (351)
T PLN02650 83 HVATPMDF--ESKDPENEVIKPTVNGMLSIMKACAK--AKTVRRIVFTSSAGT--VNVEEHQKPVYDEDCWSDLDFCRRK 156 (351)
T ss_pred EeCCCCCC--CCCCchhhhhhHHHHHHHHHHHHHHh--cCCceEEEEecchhh--cccCCCCCCccCcccCCchhhhhcc
Confidence 99986421 11223357889999999999999998 44 689999999876 5432 2223 455532
Q ss_pred --CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHHHHHHHcCCC-CCCCcceeeeccHHHHHH
Q 020476 160 --SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 160 --~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~ 233 (325)
+...| .+|...|.....+...++++++++||+++|||+.... ..+...+....+.. .......++|+|++|+|+
T Consensus 157 ~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~Dva~ 236 (351)
T PLN02650 157 KMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLDDLCN 236 (351)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHHHHHH
Confidence 12357 8899889888888877899999999999999975321 12222222222222 111223579999999999
Q ss_pred HHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCccc
Q 020476 234 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 313 (325)
Q Consensus 234 a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~ 313 (325)
+++.+++++...+.| ++++..+|+.|+++.+.+.++... .+... .+. .........+++|++++||+|++
T Consensus 237 a~~~~l~~~~~~~~~-i~~~~~~s~~el~~~i~~~~~~~~---~~~~~----~~~--~~~~~~~~~d~~k~~~lG~~p~~ 306 (351)
T PLN02650 237 AHIFLFEHPAAEGRY-ICSSHDATIHDLAKMLREKYPEYN---IPARF----PGI--DEDLKSVEFSSKKLTDLGFTFKY 306 (351)
T ss_pred HHHHHhcCcCcCceE-EecCCCcCHHHHHHHHHHhCcccC---CCCCC----CCc--CcccccccCChHHHHHhCCCCCC
Confidence 999999887656788 566678999999999999886321 11110 000 01122345677888889999999
Q ss_pred ccHHHHHHHHhC
Q 020476 314 RYVKDALKAIMS 325 (325)
Q Consensus 314 ~~~~~~l~~~~~ 325 (325)
+++++|+++++
T Consensus 307 -~l~egl~~~i~ 317 (351)
T PLN02650 307 -SLEDMFDGAIE 317 (351)
T ss_pred -CHHHHHHHHHH
Confidence 59999999863
|
|
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-38 Score=250.16 Aligned_cols=289 Identities=19% Similarity=0.238 Sum_probs=226.5
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+...+||+||||.||||+||++.|..+||+|++++.--.........- ...+.+++.-.+....++..+|-|+|+|++
T Consensus 24 p~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~--~~~~~fel~~hdv~~pl~~evD~IyhLAap 101 (350)
T KOG1429|consen 24 PSQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHW--IGHPNFELIRHDVVEPLLKEVDQIYHLAAP 101 (350)
T ss_pred CCCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchh--ccCcceeEEEeechhHHHHHhhhhhhhccC
Confidence 445689999999999999999999999999999997654433322210 115567888777888889999999999998
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC-------CCCch-HHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP-------SGNDY-LAEV 168 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~-------~~~~y-~~k~ 168 (325)
.++.++.. ++...+.+|+.++.+.+-.|++ .+ +|+++.||+.| ||++..+|..|+.+ +.+-| ..|+
T Consensus 102 asp~~y~~-npvktIktN~igtln~lglakr--v~-aR~l~aSTseV--Ygdp~~hpq~e~ywg~vnpigpr~cydegKr 175 (350)
T KOG1429|consen 102 ASPPHYKY-NPVKTIKTNVIGTLNMLGLAKR--VG-ARFLLASTSEV--YGDPLVHPQVETYWGNVNPIGPRSCYDEGKR 175 (350)
T ss_pred CCCccccc-CccceeeecchhhHHHHHHHHH--hC-ceEEEeecccc--cCCcccCCCccccccccCcCCchhhhhHHHH
Confidence 76655433 4556667999999999999999 44 89999999999 99988888777665 24457 8899
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
..|.+...|.+..|+.+.|.|+.++|||.... ..+.+..+ +...+.++ ++|.+.|+|.+++|++++++.+++.+
T Consensus 176 ~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~Vegll~Lm~s~ 255 (350)
T KOG1429|consen 176 VAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDLVEGLLRLMESD 255 (350)
T ss_pred HHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHHHHHHHHHhcCC
Confidence 99999999999999999999999999996321 23444444 56677775 89999999999999999999999987
Q ss_pred CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHH
Q 020476 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALK 321 (325)
Q Consensus 243 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~ 321 (325)
. .+-+|+++++.+|+.||++++.+..+....+..-... .. -.+..+-|+.++++ |||.|+.+ ++|+|.
T Consensus 256 ~-~~pvNiGnp~e~Tm~elAemv~~~~~~~s~i~~~~~~----~D-----dp~kR~pDit~ake~LgW~Pkv~-L~egL~ 324 (350)
T KOG1429|consen 256 Y-RGPVNIGNPGEFTMLELAEMVKELIGPVSEIEFVENG----PD-----DPRKRKPDITKAKEQLGWEPKVS-LREGLP 324 (350)
T ss_pred C-cCCcccCCccceeHHHHHHHHHHHcCCCcceeecCCC----CC-----CccccCccHHHHHHHhCCCCCCc-HHHhhH
Confidence 5 5669999999999999999999999654221111100 01 12335566777765 99999994 999999
Q ss_pred HHh
Q 020476 322 AIM 324 (325)
Q Consensus 322 ~~~ 324 (325)
.++
T Consensus 325 ~t~ 327 (350)
T KOG1429|consen 325 LTV 327 (350)
T ss_pred HHH
Confidence 875
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.7e-38 Score=294.30 Aligned_cols=300 Identities=18% Similarity=0.253 Sum_probs=217.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCch-hHhhhCCCCEEEECC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLA 94 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~-~~~~~~~~d~vi~~a 94 (325)
...+|+|||||||||||++|+++|+++ |++|++++|............ ...+..+|+.|.+. +.++++++|+|||+|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~-~~~~~~gDl~d~~~~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHP-RFHFVEGDISIHSEWIEYHIKKCDVVLPLV 390 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCC-ceEEEeccccCcHHHHHHHhcCCCEEEECc
Confidence 345679999999999999999999985 799999999765432221110 01144568887655 567788999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---------CCch-
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY- 164 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---------~~~y- 164 (325)
+...... ...++...+++|+.++.+++++|++ .+ +++||+||..+ ||...+.+++|+++. ...|
T Consensus 391 a~~~~~~-~~~~~~~~~~~Nv~~t~~ll~a~~~--~~-~~~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p~s~Yg 464 (660)
T PRK08125 391 AIATPIE-YTRNPLRVFELDFEENLKIIRYCVK--YN-KRIIFPSTSEV--YGMCTDKYFDEDTSNLIVGPINKQRWIYS 464 (660)
T ss_pred cccCchh-hccCHHHHHHhhHHHHHHHHHHHHh--cC-CeEEEEcchhh--cCCCCCCCcCccccccccCCCCCCccchH
Confidence 9754322 2334567889999999999999999 55 79999999998 997655677776642 1258
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-------cchHHHH--HHHcCCCC---CCCcceeeeccHHHHH
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV 232 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a 232 (325)
.+|...|.....+...++++++++||+++||++.... ...++.+ +...+.++ +++.+.++|+|++|+|
T Consensus 465 ~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~~rd~i~v~Dva 544 (660)
T PRK08125 465 VSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQKRCFTDIRDGI 544 (660)
T ss_pred HHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCceeeceeeHHHHH
Confidence 8898888888888777799999999999999975321 1223332 34445554 6788999999999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC-CCCHHHHHHHHHHHhCCCC-CCCccHHH-HHH-----HhCccceeeccCcccCh
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA-LKA-----VLGEGAFVVLEGQRVVP 301 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~-~~s~~e~~~~i~~~~g~~~-~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~ 301 (325)
++++.+++++. .+++||+++++ .+|++|+++.+.+.+|.+. .+..|... ... ..+.. .........++
T Consensus 545 ~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ 623 (660)
T PRK08125 545 EALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKHPLRDHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSI 623 (660)
T ss_pred HHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccCcccccCCccccccccccccccccc-cccccccCCCh
Confidence 99999998753 24599999985 7999999999999999642 22222211 000 00000 00112334677
Q ss_pred hHHH-HcCCCcccccHHHHHHHHhC
Q 020476 302 ARAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 302 ~k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
+|++ +|||+|++ +++++|+++++
T Consensus 624 ~ka~~~LGw~P~~-~lee~l~~~i~ 647 (660)
T PRK08125 624 RNARRLLDWEPKI-DMQETIDETLD 647 (660)
T ss_pred HHHHHHhCCCCCC-cHHHHHHHHHH
Confidence 8886 58999999 59999999863
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-37 Score=276.11 Aligned_cols=292 Identities=18% Similarity=0.168 Sum_probs=205.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-------cC--------------CCCCccccCceeecC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IF--------------PGKKTRFFPGVMIAE 76 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~--------------~~~~~~~~~~~d~~d 76 (325)
.++|+||||||+||||++|++.|+++|++|++++|....... .. .......+..+|+.|
T Consensus 45 ~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~v~~Dl~d 124 (442)
T PLN02572 45 SKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIELYVGDICD 124 (442)
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcceEEECCCCC
Confidence 356799999999999999999999999999998753221100 00 000011245679999
Q ss_pred CchhHhhhC--CCCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-CEEEEeeeeeeeecCCCC
Q 020476 77 EPQWRDCIQ--GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSET 151 (325)
Q Consensus 77 ~~~~~~~~~--~~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~~v~~Ss~~v~~~g~~~~ 151 (325)
.+.+.++++ ++|+|||+|+..... ..........+++|+.++.+++++|++ .+++ ++|++||..+ ||....
T Consensus 125 ~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~--~gv~~~~V~~SS~~v--YG~~~~ 200 (442)
T PLN02572 125 FEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE--FAPDCHLVKLGTMGE--YGTPNI 200 (442)
T ss_pred HHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH--hCCCccEEEEeccee--cCCCCC
Confidence 999998887 589999999764221 111223355678999999999999998 6665 8999999998 985421
Q ss_pred ceec-----------CCC---C--CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-------------
Q 020476 152 EVFD-----------ESS---P--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------------- 201 (325)
Q Consensus 152 ~~~~-----------e~~---~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~------------- 201 (325)
+.+ |++ + +.+.| .+|...|.+...+...++++++++||+++||++....
T Consensus 201 -~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li~~~~~~ 279 (442)
T PLN02572 201 -DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELINRLDYD 279 (442)
T ss_pred -CCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccccccCcc
Confidence 121 121 2 23467 8888888888888887899999999999999975321
Q ss_pred ---cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCC-C--ceEEeeCCCCCCHHHHHHHHHHH--
Q 020476 202 ---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV-- 268 (325)
Q Consensus 202 ---~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~--~~~~~~~~~~~s~~e~~~~i~~~-- 268 (325)
...++.+ +...++++ +++.+.++|+|++|+|++++.+++.+.. + .+||+++ ..+|+.|+++.+.+.
T Consensus 280 ~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~~~g~~~i~Nigs-~~~si~el~~~i~~~~~ 358 (442)
T PLN02572 280 GVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPAKPGEFRVFNQFT-EQFSVNELAKLVTKAGE 358 (442)
T ss_pred cchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChhhcCceeEEEeCC-CceeHHHHHHHHHHHHH
Confidence 1222222 44456653 7889999999999999999999986532 2 4899976 579999999999999
Q ss_pred -hCCCCCCC-ccHHHHHHHhCccceeeccCcccChhHHHHcCCCccc---ccHHHHHHHHh
Q 020476 269 -LGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY---RYVKDALKAIM 324 (325)
Q Consensus 269 -~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~---~~~~~~l~~~~ 324 (325)
+|.+..+. .|.. ...........+.+|+++|||+|++ + +.++|.+++
T Consensus 359 ~~g~~~~~~~~p~~--------~~~~~~~~~~~d~~k~~~LGw~p~~~~~~-l~~~l~~~~ 410 (442)
T PLN02572 359 KLGLDVEVISVPNP--------RVEAEEHYYNAKHTKLCELGLEPHLLSDS-LLDSLLNFA 410 (442)
T ss_pred hhCCCCCeeeCCCC--------cccccccccCccHHHHHHcCCCCCCcHHH-HHHHHHHHH
Confidence 88653221 1111 0011122345677888889999997 4 677776664
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-37 Score=267.17 Aligned_cols=290 Identities=20% Similarity=0.224 Sum_probs=207.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc---C---CCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---F---PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~---~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
..|+||||||+||||++++++|+++|++|++++|+....... . .......+..+|+.|++.+.++++++|+|||
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih 82 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEHLLALDGAKERLHLFKANLLEEGSFDSVVDGCEGVFH 82 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHHHHhccCCCCceEEEeccccCcchHHHHHcCCCEEEE
Confidence 347999999999999999999999999999999976532111 0 0000112445789999999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCC-CCCCEEEEeeeeeeeecCC---CCceecCCCCCC-------
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS---ETEVFDESSPSG------- 161 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~~v~~Ss~~v~~~g~~---~~~~~~e~~~~~------- 161 (325)
+|+.... ........++++|+.++.+++++|++ . +++++||+||.++..|+.. ...+++|+.+..
T Consensus 83 ~A~~~~~--~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p~~~~~~ 158 (322)
T PLN02662 83 TASPFYH--DVTDPQAELIDPAVKGTLNVLRSCAK--VPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDPAFCEES 158 (322)
T ss_pred eCCcccC--CCCChHHHHHHHHHHHHHHHHHHHHh--CCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCChhHhhcc
Confidence 9986421 11222247888999999999999987 5 7889999999864226532 223567765432
Q ss_pred -Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchH-HH-HHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-PL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 -~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...|.....+.++.+++++++||+++||++........ .. .....+.+. .+.+.++|+|++|+|++++.
T Consensus 159 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~a~~~ 237 (322)
T PLN02662 159 KLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQT-FPNASYRWVDVRDVANAHIQ 237 (322)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCcc-CCCCCcCeEEHHHHHHHHHH
Confidence 257 77888887777777777999999999999999753321111 11 233334332 23467899999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHH
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVK 317 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~ 317 (325)
+++.+...|.||++ +.++|++|+++.+.+.++.. +.|.... +. ........++++|++++||+|+ +++
T Consensus 238 ~~~~~~~~~~~~~~-g~~~s~~e~~~~i~~~~~~~---~~~~~~~----~~--~~~~~~~~~d~~k~~~lg~~~~--~~~ 305 (322)
T PLN02662 238 AFEIPSASGRYCLV-ERVVHYSEVVKILHELYPTL---QLPEKCA----DD--KPYVPTYQVSKEKAKSLGIEFI--PLE 305 (322)
T ss_pred HhcCcCcCCcEEEe-CCCCCHHHHHHHHHHHCCCC---CCCCCCC----Cc--cccccccccChHHHHHhCCccc--cHH
Confidence 99987666789997 56799999999999988742 1121100 00 0112345688899989999974 699
Q ss_pred HHHHHHhC
Q 020476 318 DALKAIMS 325 (325)
Q Consensus 318 ~~l~~~~~ 325 (325)
++|+++++
T Consensus 306 ~~l~~~~~ 313 (322)
T PLN02662 306 VSLKDTVE 313 (322)
T ss_pred HHHHHHHH
Confidence 99999863
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-37 Score=266.16 Aligned_cols=280 Identities=15% Similarity=0.200 Sum_probs=199.0
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC---ch-hHhhh-----CCCCEEEEC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQ-WRDCI-----QGSTAVVNL 93 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~---~~-~~~~~-----~~~d~vi~~ 93 (325)
||||||+||||++|+++|++.|++++++.|+......... ...+|+.|. +. +.+++ .++|+|||+
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~~~~~~~~~~~~d~Vih~ 75 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVN------LVDLDIADYMDKEDFLAQIMAGDDFGDIEAIFHE 75 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHHHh------hhhhhhhhhhhHHHHHHHHhcccccCCccEEEEC
Confidence 7999999999999999999999987777766533211101 122444443 33 23333 269999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR 170 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~ 170 (325)
|+......+ ....+++.|+.++.+++++|++ .++ ++||+||.++ ||.....+.+|+.+. ...| .+|...
T Consensus 76 A~~~~~~~~---~~~~~~~~n~~~t~~ll~~~~~--~~~-~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~ 147 (308)
T PRK11150 76 GACSSTTEW---DGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTDDFIEEREYEKPLNVYGYSKFLF 147 (308)
T ss_pred ceecCCcCC---ChHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEcchHH--hCcCCCCCCccCCCCCCCCHHHHHHHHH
Confidence 986432221 2345789999999999999998 565 6999999998 987655566666553 3467 778887
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHHcCCCC----CCCcceeeeccHHHHHHHHHHHHcC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~~~~~~----~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
|.....+....+++++++||+++||++.... ..+...+ +...+.+. +++...++++|++|+|++++.+++.
T Consensus 148 E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~ 227 (308)
T PRK11150 148 DEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWEN 227 (308)
T ss_pred HHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhc
Confidence 8777777666799999999999999975332 1222222 34444432 4556789999999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDA 319 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~ 319 (325)
+ .+++||+++++++|+.|+++.+.+.+|.... .+.|.... + .......++++|++++||+|++.+++++
T Consensus 228 ~-~~~~yni~~~~~~s~~el~~~i~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~d~~k~~~~g~~p~~~~~~~g 298 (308)
T PRK11150 228 G-VSGIFNCGTGRAESFQAVADAVLAYHKKGEIEYIPFPDKLK----G----RYQAFTQADLTKLRAAGYDKPFKTVAEG 298 (308)
T ss_pred C-CCCeEEcCCCCceeHHHHHHHHHHHhCCCcceeccCccccc----c----ccceecccCHHHHHhcCCCCCCCCHHHH
Confidence 5 3679999999999999999999999985311 12121100 0 0112345788889889999875369999
Q ss_pred HHHHhC
Q 020476 320 LKAIMS 325 (325)
Q Consensus 320 l~~~~~ 325 (325)
|+++++
T Consensus 299 l~~~~~ 304 (308)
T PRK11150 299 VAEYMA 304 (308)
T ss_pred HHHHHH
Confidence 999863
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=266.68 Aligned_cols=292 Identities=16% Similarity=0.222 Sum_probs=206.8
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
+.++|+||||||+||||++|+++|++.|++|+++.|+....... ........+..+|+.|.+.+.++++++|+||
T Consensus 6 ~~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 85 (338)
T PLN00198 6 PTGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTDEESFEAPIAGCDLVF 85 (338)
T ss_pred CCCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCChHHHHHHHhcCCEEE
Confidence 44567999999999999999999999999999999876432110 0000001244679999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC----CceecCC----------
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDES---------- 157 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~----~~~~~e~---------- 157 (325)
|+|+... .........++++|+.++.++++++++. .+++++||+||..+ ||... +.+.+|+
T Consensus 86 h~A~~~~--~~~~~~~~~~~~~nv~g~~~ll~a~~~~-~~~~~~v~~SS~~~--~g~~~~~~~~~~~~E~~~~~~~~~~~ 160 (338)
T PLN00198 86 HVATPVN--FASEDPENDMIKPAIQGVHNVLKACAKA-KSVKRVILTSSAAA--VSINKLSGTGLVMNEKNWTDVEFLTS 160 (338)
T ss_pred EeCCCCc--cCCCChHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEeeccee--eeccCCCCCCceeccccCCchhhhhh
Confidence 9998531 1222334567789999999999999873 25789999999988 77432 2344443
Q ss_pred -CCCCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH-HHHcCCCC---C-CCc----ceeee
Q 020476 158 -SPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL---G-SGQ----QWFSW 225 (325)
Q Consensus 158 -~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~-~~~~~~~~---~-~~~----~~~~~ 225 (325)
.++...| .+|...|.....+...++++++++||+++|||+... ...++..+ ....+.++ + ++. ..++|
T Consensus 161 ~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 240 (338)
T PLN00198 161 EKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQMLSGSISI 240 (338)
T ss_pred cCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccccCCcce
Confidence 2234568 889989988888877789999999999999997432 22222222 33344332 2 122 23799
Q ss_pred ccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH
Q 020476 226 IHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK 305 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 305 (325)
+|++|+|++++.+++.+...+.|+ +++..+|+.|+++.+.+.++... ++.. . +..+ ......++++|++
T Consensus 241 i~V~D~a~a~~~~~~~~~~~~~~~-~~~~~~s~~el~~~i~~~~~~~~-~~~~--~-----~~~~--~~~~~~~~~~k~~ 309 (338)
T PLN00198 241 THVEDVCRAHIFLAEKESASGRYI-CCAANTSVPELAKFLIKRYPQYQ-VPTD--F-----GDFP--SKAKLIISSEKLI 309 (338)
T ss_pred eEHHHHHHHHHHHhhCcCcCCcEE-EecCCCCHHHHHHHHHHHCCCCC-CCcc--c-----cccC--CCCccccChHHHH
Confidence 999999999999998865567884 55667999999999999886421 1111 0 0000 0123456778888
Q ss_pred HcCCCcccccHHHHHHHHhC
Q 020476 306 ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 306 ~lg~~p~~~~~~~~l~~~~~ 325 (325)
++||+|++ +++|+|+++++
T Consensus 310 ~~G~~p~~-~l~~gi~~~~~ 328 (338)
T PLN00198 310 SEGFSFEY-GIEEIYDQTVE 328 (338)
T ss_pred hCCceecC-cHHHHHHHHHH
Confidence 88999999 59999999863
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=262.09 Aligned_cols=288 Identities=22% Similarity=0.306 Sum_probs=219.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCC-CEEEECCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS-TAVVNLAGTPIG 99 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~-d~vi~~a~~~~~ 99 (325)
|+|||||||||||++|+++|+++|++|++++|...+........ .+..+|+.|.+.+.++++.+ |+|||+|+....
T Consensus 1 ~~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~d~vih~aa~~~~ 77 (314)
T COG0451 1 MRILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV---EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSV 77 (314)
T ss_pred CeEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccccccc---ceeeecccchHHHHHHHhcCCCEEEEccccCch
Confidence 45999999999999999999999999999999887655443111 25567888888888888887 999999997632
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC-CCceecCC-CCCCCc--h-HHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDES-SPSGND--Y-LAEVCREWEG 174 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~-~~~~~~e~-~~~~~~--y-~~k~~~~~~~ 174 (325)
......++..++++|+.++.+++++|++ .+++++||.||.++ |+.. ...+++|+ .+..+. | .+|...|...
T Consensus 78 ~~~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~~~~v~~ss~~~--~~~~~~~~~~~E~~~~~~p~~~Yg~sK~~~E~~~ 153 (314)
T COG0451 78 PDSNASDPAEFLDVNVDGTLNLLEAARA--AGVKRFVFASSVSV--VYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLL 153 (314)
T ss_pred hhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCCCce--ECCCCCCCCcccccCCCCCCCHHHHHHHHHHHHH
Confidence 2111113567899999999999999999 89999999777776 5543 44467887 455444 8 7888888888
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCCcc-c-chHHH-H-HHHcCCC-C---CCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGGAL-A-KMIPL-F-MMFAGGP-L---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~~~-~-~~~~~-~-~~~~~~~-~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
..+....+++++++||+.+||+++... . .+... + ....+.+ + +++...++++|++|++++++.+++++...
T Consensus 154 ~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~- 232 (314)
T COG0451 154 RAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPDGG- 232 (314)
T ss_pred HHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCCCc-
Confidence 777776789999999999999986432 1 12222 2 3444554 2 46677889999999999999999988755
Q ss_pred eEEeeCCC-CCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHHHH
Q 020476 247 VINGTAPN-PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAI 323 (325)
Q Consensus 247 ~~~~~~~~-~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~ 323 (325)
.||+++++ +.+++|+++.+++.+|.+... ..... ...........++++|++ ++||.|++ ++++++.++
T Consensus 233 ~~ni~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~lg~~p~~-~~~~~i~~~ 304 (314)
T COG0451 233 VFNIGSGTAEITVRELAEAVAEAVGSKAPLIVYIPL-------GRRGDLREGKLLDISKARAALGWEPKV-SLEEGLADT 304 (314)
T ss_pred EEEeCCCCCcEEHHHHHHHHHHHhCCCCcceeecCC-------CCCCcccccccCCHHHHHHHhCCCCCC-CHHHHHHHH
Confidence 99999997 899999999999999976431 11110 123334556778888886 79999998 599999987
Q ss_pred h
Q 020476 324 M 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 305 ~ 305 (314)
T COG0451 305 L 305 (314)
T ss_pred H
Confidence 5
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-37 Score=269.22 Aligned_cols=297 Identities=16% Similarity=0.177 Sum_probs=210.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCC--cccccCCC--CCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
||||||||+||||+++++.|+++|++ |++++|... ........ .....+..+|+.|.+.+.++++ ++|+|||+
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLADVSDSERYVFEHADICDRAELDRIFAQHQPDAVMHL 80 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHHhcccCCceEEEEecCCCHHHHHHHHHhcCCCEEEEC
Confidence 68999999999999999999999875 665655321 11111100 0001134679999999998886 58999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-------CCCCCEEEEeeeeeeeecCCC---------C-ceecC
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATALGYYGTSE---------T-EVFDE 156 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-------~~~~~~v~~Ss~~v~~~g~~~---------~-~~~~e 156 (325)
|+.... ......+..++++|+.++.+++++|++.. .+++++|++||.++ ||... . .+++|
T Consensus 81 A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~E 157 (352)
T PRK10084 81 AAESHV-DRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEV--YGDLPHPDEVENSEELPLFTE 157 (352)
T ss_pred CcccCC-cchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhh--cCCCCccccccccccCCCccc
Confidence 996422 22233457889999999999999998621 13568999999998 87531 1 23566
Q ss_pred CCCC--CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccH
Q 020476 157 SSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL 228 (325)
Q Consensus 157 ~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v 228 (325)
+++. ...| .+|...|.....+.+.++++++++|++.+||++.... .+++.+ ....+.++ +++++.++++|+
T Consensus 158 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v 236 (352)
T PRK10084 158 TTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (352)
T ss_pred cCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCcc-chHHHHHHHHhcCCCeEEeCCCCeEEeeEEH
Confidence 6654 3467 7888888888777777899999999999999985332 233332 33445442 678899999999
Q ss_pred HHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHH-HHHHHhCccceeeccCcccChhHHHH-
Q 020476 229 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEF-ALKAVLGEGAFVVLEGQRVVPARAKE- 306 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~k~~~- 306 (325)
+|+|+++..+++.+..+++||++++++.|+.|+++.+++.+|...+...+.. ....... .+.......+|++|+++
T Consensus 237 ~D~a~a~~~~l~~~~~~~~yni~~~~~~s~~~~~~~i~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~d~~k~~~~ 314 (352)
T PRK10084 237 EDHARALYKVVTEGKAGETYNIGGHNEKKNLDVVLTICDLLDEIVPKATSYREQITYVAD--RPGHDRRYAIDASKISRE 314 (352)
T ss_pred HHHHHHHHHHHhcCCCCceEEeCCCCcCcHHHHHHHHHHHhccccccccchhhhcccccc--CCCCCceeeeCHHHHHHH
Confidence 9999999999987656679999999999999999999999986422111111 0110001 01111234578888965
Q ss_pred cCCCcccccHHHHHHHHh
Q 020476 307 LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 307 lg~~p~~~~~~~~l~~~~ 324 (325)
+||+|++ +++++|++++
T Consensus 315 lg~~p~~-~l~~~l~~~~ 331 (352)
T PRK10084 315 LGWKPQE-TFESGIRKTV 331 (352)
T ss_pred cCCCCcC-CHHHHHHHHH
Confidence 9999999 5999999876
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=262.45 Aligned_cols=271 Identities=13% Similarity=0.099 Sum_probs=198.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
||||||||+||||++++++|+++| +|++++|... ....|+.|.+.+.++++ ++|+|||||+...
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~-------------~~~~Dl~d~~~~~~~~~~~~~D~Vih~Aa~~~ 66 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST-------------DYCGDFSNPEGVAETVRKIRPDVIVNAAAHTA 66 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc-------------cccCCCCCHHHHHHHHHhcCCCEEEECCccCC
Confidence 689999999999999999999999 7999988642 22369999999998887 5899999999753
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
......++...+++|+.++.+++++|++ .+. ++||+||..+ ||.....|++|++++.+ .| .+|...|....
T Consensus 67 -~~~~~~~~~~~~~~N~~~~~~l~~aa~~--~g~-~~v~~Ss~~V--y~~~~~~p~~E~~~~~P~~~Yg~sK~~~E~~~~ 140 (299)
T PRK09987 67 -VDKAESEPEFAQLLNATSVEAIAKAANE--VGA-WVVHYSTDYV--FPGTGDIPWQETDATAPLNVYGETKLAGEKALQ 140 (299)
T ss_pred -cchhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEccceE--ECCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 3334455677888999999999999999 564 7999999999 98776778888877544 56 66766666554
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CC--CcceeeeccHHHHHHHHHHHHcCCCCCceE
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GS--GQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~--~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~ 248 (325)
.+ ..+++|+|++++||++... +.+.+ ....+.++ ++ +.+.+.+.+.+|++.++..++..+...|+|
T Consensus 141 ~~----~~~~~ilR~~~vyGp~~~~---~~~~~~~~~~~~~~~~v~~d~~g~~~~~~~~~d~~~~~~~~~~~~~~~~giy 213 (299)
T PRK09987 141 EH----CAKHLIFRTSWVYAGKGNN---FAKTMLRLAKEREELSVINDQFGAPTGAELLADCTAHAIRVALNKPEVAGLY 213 (299)
T ss_pred Hh----CCCEEEEecceecCCCCCC---HHHHHHHHHhcCCCeEEeCCCcCCCCCHHHHHHHHHHHHHHhhccCCCCCeE
Confidence 33 3467999999999997532 22322 22334443 33 445455666777888888887665556899
Q ss_pred EeeCCCCCCHHHHHHHHHHHhCC---CC----CCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHH
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLGR---PS----WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL 320 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l 320 (325)
|+++++++|+.|+++.+.+.++. +. ..+.+..... . +........++++|+++ +||+|+ +|+++|
T Consensus 214 ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~~i~~~~~~~~~---~--~~~rp~~~~ld~~k~~~~lg~~~~--~~~~~l 286 (299)
T PRK09987 214 HLVASGTTTWHDYAALVFEEARKAGITLALNKLNAVPTSAYP---T--PARRPHNSRLNTEKFQQNFALVLP--DWQVGV 286 (299)
T ss_pred EeeCCCCccHHHHHHHHHHHHHhcCCCcCcCeeeecchhhcC---C--CCCCCCcccCCHHHHHHHhCCCCc--cHHHHH
Confidence 99999999999999999886542 21 1122221111 1 11123455788888976 999986 699999
Q ss_pred HHHhC
Q 020476 321 KAIMS 325 (325)
Q Consensus 321 ~~~~~ 325 (325)
+++++
T Consensus 287 ~~~~~ 291 (299)
T PRK09987 287 KRMLT 291 (299)
T ss_pred HHHHH
Confidence 98863
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-37 Score=270.65 Aligned_cols=292 Identities=19% Similarity=0.171 Sum_probs=212.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
.|+||||||+||||+++++.|+++|++|++++|+........ .......+..+|+.|.+.+.++++ ++|+|||+|
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~A 83 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHLA 83 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEECC
Confidence 479999999999999999999999999999999775432111 100011134578899999988887 479999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCC-ceecCCCCC--CCch-HHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEVC 169 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~-~~~~e~~~~--~~~y-~~k~~ 169 (325)
+... ......++...+++|+.++.++++++++ .+ ++++|++||..+ ||.... .+++|+.+. ...| .+|..
T Consensus 84 ~~~~-~~~~~~~~~~~~~~N~~g~~~ll~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~~e~~~~~p~~~Y~~sK~~ 158 (349)
T TIGR02622 84 AQPL-VRKSYADPLETFETNVMGTVNLLEAIRA--IGSVKAVVNVTSDKC--YRNDEWVWGYRETDPLGGHDPYSSSKAC 158 (349)
T ss_pred cccc-cccchhCHHHHHHHhHHHHHHHHHHHHh--cCCCCEEEEEechhh--hCCCCCCCCCccCCCCCCCCcchhHHHH
Confidence 9642 2334456678889999999999999987 44 679999999988 886432 356666553 4567 77888
Q ss_pred HHHHHHHHhhcC-------CceEEEEEeceEEcCCCCcccchHHHH--HHHcCCC--CCCCcceeeeccHHHHHHHHHHH
Q 020476 170 REWEGTALKVNK-------DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 170 ~~~~~~~~~~~~-------~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.|.....+.... +++++++||+.+||+++.....+++.+ ....+.+ ++++.+.++|+|++|+|++++.+
T Consensus 159 ~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~rd~i~v~D~a~a~~~~ 238 (349)
T TIGR02622 159 AELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIRNPDATRPWQHVLEPLSGYLLL 238 (349)
T ss_pred HHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEECCCCcccceeeHHHHHHHHHHH
Confidence 887776655432 899999999999999753323344444 3334544 37788999999999999999988
Q ss_pred HcCC-----CCCceEEeeCC--CCCCHHHHHHHHHHHhCCC-CCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCC
Q 020476 239 LSNP-----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF 309 (325)
Q Consensus 239 ~~~~-----~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~ 309 (325)
++.. ..+++||++++ ++.+..|+++.+.+.++.. ..+..+.. ...........++.+|+++ +||
T Consensus 239 ~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lgw 311 (349)
T TIGR02622 239 AEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWGDDAEWEDDSD-------LNHPHEARLLKLDSSKARTLLGW 311 (349)
T ss_pred HHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcCCCCceeeccC-------CCCCcccceeecCHHHHHHHhCC
Confidence 7642 23579999974 6899999999999887642 11211100 0011122345678888865 899
Q ss_pred CcccccHHHHHHHHh
Q 020476 310 PFKYRYVKDALKAIM 324 (325)
Q Consensus 310 ~p~~~~~~~~l~~~~ 324 (325)
+|++ +++++|++++
T Consensus 312 ~p~~-~l~~gi~~~i 325 (349)
T TIGR02622 312 HPRW-GLEEAVSRTV 325 (349)
T ss_pred CCCC-CHHHHHHHHH
Confidence 9999 5999999876
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=288.29 Aligned_cols=292 Identities=20% Similarity=0.224 Sum_probs=214.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCC--cccccCC--CCCccccCceeecCCchhHhhh--CCCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRS--KAELIFP--GKKTRFFPGVMIAEEPQWRDCI--QGSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~--~~~~~~~--~~~~~~~~~~d~~d~~~~~~~~--~~~d~v 90 (325)
.+|||||||||||||++|+++|+++ +++|++++|... ....+.. ......+..+|+.|.+.+..++ .++|+|
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 84 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNPSKSSPNFKFVKGDIASADLVNYLLITEGIDTI 84 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhhcccCCCeEEEECCCCChHHHHHHHhhcCCCEE
Confidence 3579999999999999999999987 689999988531 1111110 0011124457888888887665 589999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCce---ecCCCCC--CCch
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEV---FDESSPS--GNDY 164 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~---~~e~~~~--~~~y 164 (325)
||+|+.... .....++.+++++|+.++.+++++|++ .+ ++++||+||..+ ||.....+ .+|+.+. ...|
T Consensus 85 iHlAa~~~~-~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~vkr~I~~SS~~v--yg~~~~~~~~~~~E~~~~~p~~~Y 159 (668)
T PLN02260 85 MHFAAQTHV-DNSFGNSFEFTKNNIYGTHVLLEACKV--TGQIRRFIHVSTDEV--YGETDEDADVGNHEASQLLPTNPY 159 (668)
T ss_pred EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEEcchHH--hCCCccccccCccccCCCCCCCCc
Confidence 999997522 222334567889999999999999998 44 789999999998 98665432 2454443 3467
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.+|...|.....+....+++++++||++|||++.... .+++.+ ....+.++ +++.+.++|+|++|+|+++..+
T Consensus 160 ~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~-~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~ 238 (668)
T PLN02260 160 SATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPE-KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVV 238 (668)
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcc-cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHH
Confidence 7888888888777777799999999999999976332 233333 33445543 6788899999999999999999
Q ss_pred HcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHH
Q 020476 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKD 318 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~ 318 (325)
++.+..+++||+++++++|+.|+++.+++.+|.+....+.. ....+.......++++|++++||+|++ +++|
T Consensus 239 l~~~~~~~vyni~~~~~~s~~el~~~i~~~~g~~~~~~i~~-------~~~~p~~~~~~~~d~~k~~~lGw~p~~-~~~e 310 (668)
T PLN02260 239 LHKGEVGHVYNIGTKKERRVIDVAKDICKLFGLDPEKSIKF-------VENRPFNDQRYFLDDQKLKKLGWQERT-SWEE 310 (668)
T ss_pred HhcCCCCCEEEECCCCeeEHHHHHHHHHHHhCCCCcceeee-------cCCCCCCcceeecCHHHHHHcCCCCCC-CHHH
Confidence 98776678999999999999999999999999753211100 000111122345788889999999998 5999
Q ss_pred HHHHHh
Q 020476 319 ALKAIM 324 (325)
Q Consensus 319 ~l~~~~ 324 (325)
+|++++
T Consensus 311 gl~~~i 316 (668)
T PLN02260 311 GLKKTM 316 (668)
T ss_pred HHHHHH
Confidence 999886
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=266.93 Aligned_cols=292 Identities=15% Similarity=0.120 Sum_probs=214.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCC-------CCccccCceeecCCchhHhhhC--CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG-------KKTRFFPGVMIAEEPQWRDCIQ--GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-------~~~~~~~~~d~~d~~~~~~~~~--~~ 87 (325)
.+|+||||||+||||++++++|+++|++|++++|+++.. ...... .....+..+|+.|.+.+.++++ ++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 84 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMKLHYGDLSDASSLRRWLDDIKP 84 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccccccccCceEEEEecCCCHHHHHHHHHHcCC
Confidence 357999999999999999999999999999999875421 111100 0001244578999999988887 47
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-----CEEEEeeeeeeeecCCCCceecCCCCCC-
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPSG- 161 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-----~~v~~Ss~~v~~~g~~~~~~~~e~~~~~- 161 (325)
|+|||+|+.... ......+...+++|+.++.++++++++ .+++ ++|++||..+ ||.... +++|+.+..
T Consensus 85 d~Vih~A~~~~~-~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~~~~~~v~~Ss~~v--yg~~~~-~~~E~~~~~p 158 (340)
T PLN02653 85 DEVYNLAAQSHV-AVSFEMPDYTADVVATGALRLLEAVRL--HGQETGRQIKYYQAGSSEM--YGSTPP-PQSETTPFHP 158 (340)
T ss_pred CEEEECCcccch-hhhhhChhHHHHHHHHHHHHHHHHHHH--hccccccceeEEEeccHHH--hCCCCC-CCCCCCCCCC
Confidence 999999996422 222344567778999999999999998 4543 8999999988 997654 677877653
Q ss_pred -Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc--ccchHHHH--HHHcCCC--C--CCCcceeeeccHHHH
Q 020476 162 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIPLF--MMFAGGP--L--GSGQQWFSWIHLDDI 231 (325)
Q Consensus 162 -~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~--~~~~~~~~--~~~~~~~--~--~~~~~~~~~v~v~D~ 231 (325)
+.| .+|...|.....+....+++++..|+.++|||+... ....+..+ ....+.+ + +++++.++|+|++|+
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~ 238 (340)
T PLN02653 159 RSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDY 238 (340)
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHH
Confidence 457 788888888888877778999999999999986432 12222221 2233432 2 778899999999999
Q ss_pred HHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCC--CCCccHHHHHHHhCccceeeccCcccChhHHH-HcC
Q 020476 232 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELG 308 (325)
Q Consensus 232 a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg 308 (325)
|++++.+++.+. .++||+++++++|+.|+++.+.+.+|.+. .+.+... ...+........+++|++ +||
T Consensus 239 a~a~~~~~~~~~-~~~yni~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~lg 310 (340)
T PLN02653 239 VEAMWLMLQQEK-PDDYVVATEESHTVEEFLEEAFGYVGLNWKDHVEIDPR-------YFRPAEVDNLKGDASKAREVLG 310 (340)
T ss_pred HHHHHHHHhcCC-CCcEEecCCCceeHHHHHHHHHHHcCCCCCcceeeCcc-------cCCccccccccCCHHHHHHHhC
Confidence 999999998754 57999999999999999999999998641 1111110 001111223456788886 589
Q ss_pred CCcccccHHHHHHHHhC
Q 020476 309 FPFKYRYVKDALKAIMS 325 (325)
Q Consensus 309 ~~p~~~~~~~~l~~~~~ 325 (325)
|+|++ +++|+|+++++
T Consensus 311 w~p~~-~l~~gi~~~~~ 326 (340)
T PLN02653 311 WKPKV-GFEQLVKMMVD 326 (340)
T ss_pred CCCCC-CHHHHHHHHHH
Confidence 99999 59999999863
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=255.96 Aligned_cols=292 Identities=21% Similarity=0.263 Sum_probs=212.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|+|+||||+||||+++++.|+++|++|++++|++......... ...+..+|+.|.+++.++++++|+|||+|+...
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~l~~~~~~~d~vi~~a~~~~-- 76 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGL--DVEIVEGDLRDPASLRKAVAGCRALFHVAADYR-- 76 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccC--CceEEEeeCCCHHHHHHHHhCCCEEEEeceecc--
Confidence 5899999999999999999999999999999987654322211 112456789999999999999999999997531
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC-CCCceecCCCCCCC-----ch-HHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEVFDESSPSGN-----DY-LAEVCREWE 173 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~-~~~~~~~e~~~~~~-----~y-~~k~~~~~~ 173 (325)
.....+...++.|+.++.++++++++ .+++++|++||..+ |+. ..+.+.+|+.+..+ .| .+|...|..
T Consensus 77 -~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~~~~Y~~sK~~~e~~ 151 (328)
T TIGR03466 77 -LWAPDPEEMYAANVEGTRNLLRAALE--AGVERVVYTSSVAT--LGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQA 151 (328)
T ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEechhh--cCcCCCCCCcCccCCCCcccccChHHHHHHHHHHH
Confidence 12334677889999999999999998 67899999999988 885 33456777766432 46 677777777
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeC
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 252 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~ 252 (325)
...+....+++++++||+.+||++..........+ ....+......+...+++|++|+|++++.+++++..+..|+++
T Consensus 152 ~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~~~~~~~~~~- 230 (328)
T TIGR03466 152 ALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERGRIGERYILG- 230 (328)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCCCCCceEEec-
Confidence 77766667999999999999999754322211222 2222222111233468999999999999999886555577775
Q ss_pred CCCCCHHHHHHHHHHHhCCC-CCCCccHHHHHH----------HhCccce-------eeccCcccChhHHH-HcCCCccc
Q 020476 253 PNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKA----------VLGEGAF-------VVLEGQRVVPARAK-ELGFPFKY 313 (325)
Q Consensus 253 ~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~----------~~~~~~~-------~~~~~~~~~~~k~~-~lg~~p~~ 313 (325)
++++|+.|+++.+.+.+|++ ..+..|...... ..+..+. .......++++|++ .|||+|+
T Consensus 231 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lg~~p~- 309 (328)
T TIGR03466 231 GENLTLKQILDKLAEITGRPAPRVKLPRWLLLPVAWGAEALARLTGKEPRVTVDGVRMAKKKMFFSSAKAVRELGYRQR- 309 (328)
T ss_pred CCCcCHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHhccCCCChHHHHHHcCCCCc-
Confidence 67899999999999999976 344555543221 1121111 01234567888885 5999996
Q ss_pred ccHHHHHHHHh
Q 020476 314 RYVKDALKAIM 324 (325)
Q Consensus 314 ~~~~~~l~~~~ 324 (325)
+++++|.+++
T Consensus 310 -~~~~~i~~~~ 319 (328)
T TIGR03466 310 -PAREALRDAV 319 (328)
T ss_pred -CHHHHHHHHH
Confidence 6999999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-36 Score=240.33 Aligned_cols=296 Identities=19% Similarity=0.224 Sum_probs=221.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCC--CcccccCCCCC--ccccCceeecCCchhHhhhC--CCCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR--SKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ--GSTAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~--~~~~~~~~~~~--~~~~~~~d~~d~~~~~~~~~--~~d~vi~ 92 (325)
++++||||.||||++.+..+... .+..+.++.-. .....+.+... .-.+...|+-+...+..++. .+|.|+|
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~~~~l~~~~n~p~ykfv~~di~~~~~~~~~~~~~~id~vih 86 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSNLKNLEPVRNSPNYKFVEGDIADADLVLYLFETEEIDTVIH 86 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccccchhhhhccCCCceEeeccccchHHHHhhhccCchhhhhh
Confidence 68999999999999999999876 34555554311 00111111100 01134456667766666654 7999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceec-CCCCC--CCch-HHHH
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD-ESSPS--GNDY-LAEV 168 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~-e~~~~--~~~y-~~k~ 168 (325)
.|+..+ ++..-.++.+....|+.++..|+++++.. .++++|||+||..| ||+..+.... |.+.+ .++| .+|.
T Consensus 87 faa~t~-vd~s~~~~~~~~~nnil~t~~Lle~~~~s-g~i~~fvhvSTdeV--YGds~~~~~~~E~s~~nPtnpyAasKa 162 (331)
T KOG0747|consen 87 FAAQTH-VDRSFGDSFEFTKNNILSTHVLLEAVRVS-GNIRRFVHVSTDEV--YGDSDEDAVVGEASLLNPTNPYAASKA 162 (331)
T ss_pred hHhhhh-hhhhcCchHHHhcCCchhhhhHHHHHHhc-cCeeEEEEecccce--ecCccccccccccccCCCCCchHHHHH
Confidence 999763 33444556777889999999999999985 48899999999999 9998877665 66664 3467 7899
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-H-HHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~-~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
++|.....+....+++++++|.++||||+..+. .+++.+ . ...+.+. ++|.+.++++|++|+++++..+++.++
T Consensus 163 AaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~-klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg~ 241 (331)
T KOG0747|consen 163 AAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPE-KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKGE 241 (331)
T ss_pred HHHHHHHHHhhccCCcEEEEeccCccCCCcChH-HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcCC
Confidence 999999999999999999999999999987554 344433 2 3334442 899999999999999999999999987
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKA 322 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~ 322 (325)
.+.+|||+++.+.+..|+++.+.+.+.+. +.++.+.+.. +-+..+.....+.++.+|++.|||+|+++ |+++|++
T Consensus 242 ~geIYNIgtd~e~~~~~l~k~i~eli~~~~~~~~~~p~~~---~v~dRp~nd~Ry~~~~eKik~LGw~~~~p-~~eGLrk 317 (331)
T KOG0747|consen 242 LGEIYNIGTDDEMRVIDLAKDICELFEKRLPNIDTEPFIF---FVEDRPYNDLRYFLDDEKIKKLGWRPTTP-WEEGLRK 317 (331)
T ss_pred ccceeeccCcchhhHHHHHHHHHHHHHHhccCCCCCCcce---ecCCCCcccccccccHHHHHhcCCcccCc-HHHHHHH
Confidence 78899999999999999999999999864 2222222211 11222233334778889999999999996 9999999
Q ss_pred HhC
Q 020476 323 IMS 325 (325)
Q Consensus 323 ~~~ 325 (325)
+++
T Consensus 318 tie 320 (331)
T KOG0747|consen 318 TIE 320 (331)
T ss_pred HHH
Confidence 874
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=260.75 Aligned_cols=293 Identities=19% Similarity=0.244 Sum_probs=203.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
...|+||||||+||||++++++|+++|++|++++|+..+....... .....+..+|+.|.+.+.++++++|+|||+|
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A 87 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA 87 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence 3467999999999999999999999999999999976543221110 0111134578889999999999999999999
Q ss_pred CCCCCCC-CChhhHHH-----HHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC-----ceecCCCC----
Q 020476 95 GTPIGTR-WSSEIKKE-----IKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-----EVFDESSP---- 159 (325)
Q Consensus 95 ~~~~~~~-~~~~~~~~-----~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~-----~~~~e~~~---- 159 (325)
+...... ....++.. .++.|+.++.+++++|++. .++++||++||.++ ||.... .+++|+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~-~~~~~~v~~SS~~v--yg~~~~~~~~~~~~~E~~~~p~~ 164 (353)
T PLN02896 88 ASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS-KTVKRVVFTSSIST--LTAKDSNGRWRAVVDETCQTPID 164 (353)
T ss_pred ccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc-CCccEEEEEechhh--ccccccCCCCCCccCcccCCcHH
Confidence 9753221 12223333 3455679999999999872 24789999999988 874321 34566521
Q ss_pred -------CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH-HHHcCCC--C--CCC----cc
Q 020476 160 -------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGP--L--GSG----QQ 221 (325)
Q Consensus 160 -------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~-~~~~~~~--~--~~~----~~ 221 (325)
+...| .+|...|.....+....+++++++||+++|||+... ...++..+ ....+.. . ..+ ..
T Consensus 165 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 244 (353)
T PLN02896 165 HVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLFSILSAVNSRMG 244 (353)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCccccccccccccccC
Confidence 11268 889999988888887789999999999999997532 22222222 1112221 1 111 12
Q ss_pred eeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHHHHHHhCccceeeccCcccC
Q 020476 222 WFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVV 300 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
.++|+|++|+|++++.+++.+...+.|++ ++.++|+.|+++.+.+.++.. ..+..... ..+. ....++
T Consensus 245 ~~dfi~v~Dva~a~~~~l~~~~~~~~~~~-~~~~~s~~el~~~i~~~~~~~~~~~~~~~~----~~~~------~~~~~~ 313 (353)
T PLN02896 245 SIALVHIEDICDAHIFLMEQTKAEGRYIC-CVDSYDMSELINHLSKEYPCSNIQVRLDEE----KRGS------IPSEIS 313 (353)
T ss_pred ceeEEeHHHHHHHHHHHHhCCCcCccEEe-cCCCCCHHHHHHHHHHhCCCCCcccccccc----ccCc------cccccC
Confidence 46999999999999999987655678854 567899999999999998742 11111110 0011 122457
Q ss_pred hhHHHHcCCCcccccHHHHHHHHhC
Q 020476 301 PARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 301 ~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
.+|++++||+|++ +++++|+++++
T Consensus 314 ~~~~~~lGw~p~~-~l~~~i~~~~~ 337 (353)
T PLN02896 314 SKKLRDLGFEYKY-GIEEIIDQTID 337 (353)
T ss_pred HHHHHHcCCCccC-CHHHHHHHHHH
Confidence 7888889999999 59999999863
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-35 Score=254.70 Aligned_cols=287 Identities=22% Similarity=0.247 Sum_probs=209.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCc--ccccCC--CCCccccCceeecCCchhHhhhCC--CCEEEEC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL 93 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~ 93 (325)
+|+||||||+||++++++|++.| ++|++++|.... ...... ......+..+|+.|++++.+++++ +|+|||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 80 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGDRELVSRLFTEHQPDAVVHF 80 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcCHHHHHHHHhhcCCCEEEEc
Confidence 58999999999999999999987 789998874311 111100 000112345789999999999886 9999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCc-eecCCCCCC--Cch-HHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE-VFDESSPSG--NDY-LAEV 168 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~-~~~e~~~~~--~~y-~~k~ 168 (325)
|+... ..........++++|+.++.+++++|++ ... .++|++||..+ ||..... +++|..+.. ..| .+|.
T Consensus 81 a~~~~-~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~i~~Ss~~v--~g~~~~~~~~~e~~~~~~~~~Y~~sK~ 155 (317)
T TIGR01181 81 AAESH-VDRSISGPAAFIETNVVGTYTLLEAVRK--YWHEFRFHHISTDEV--YGDLEKGDAFTETTPLAPSSPYSASKA 155 (317)
T ss_pred ccccC-chhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCceEEEeeccce--eCCCCCCCCcCCCCCCCCCCchHHHHH
Confidence 98642 2223345667889999999999999988 433 38999999998 8865433 567766543 356 6787
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
..|.....+..+.+++++++||+.+||++.... .+.+.+ ....+.++ +++...++++|++|+|+++..++++..
T Consensus 156 ~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~~ 234 (317)
T TIGR01181 156 ASDHLVRAYHRTYGLPALITRCSNNYGPYQFPE-KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKGR 234 (317)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeccccCCCCCcc-cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCCC
Confidence 777777766666799999999999999975322 233332 34445443 677889999999999999999998766
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK 321 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~ 321 (325)
.+++||+++++++|+.|+++.+.+.+|.+.. +..... .........++++|++ ++||.|+++ +++++.
T Consensus 235 ~~~~~~~~~~~~~s~~~~~~~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~k~~~~lG~~p~~~-~~~~i~ 304 (317)
T TIGR01181 235 VGETYNIGGGNERTNLEVVETILELLGKDEDLITHVED---------RPGHDRRYAIDASKIKRELGWAPKYT-FEEGLR 304 (317)
T ss_pred CCceEEeCCCCceeHHHHHHHHHHHhCCCcccccccCC---------CccchhhhcCCHHHHHHHhCCCCCCc-HHHHHH
Confidence 6679999999999999999999999996532 111100 0001112346778885 599999994 999999
Q ss_pred HHh
Q 020476 322 AIM 324 (325)
Q Consensus 322 ~~~ 324 (325)
+++
T Consensus 305 ~~~ 307 (317)
T TIGR01181 305 KTV 307 (317)
T ss_pred HHH
Confidence 876
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-35 Score=257.15 Aligned_cols=289 Identities=20% Similarity=0.253 Sum_probs=207.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CC-CCCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~-~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
|||+||||+||||+++++.|+++|++|++++|..+..... .. ......+..+|+.|.+.+.++++ ++|+|||+
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vvh~ 80 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALLTEILHDHAIDTVIHF 80 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHhcCCCceEEEccCCCHHHHHHHHhcCCCCEEEEC
Confidence 6899999999999999999999999999998754322111 00 00001134578889988888876 69999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---CCch-HHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC 169 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---~~~y-~~k~~ 169 (325)
|+..... .........+++|+.++.+++++|++ .+++++|++||.++ ||.....+++|+++. ...| .+|..
T Consensus 81 a~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--yg~~~~~~~~E~~~~~~p~~~Y~~sK~~ 155 (338)
T PRK10675 81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNLIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKSKLM 155 (338)
T ss_pred Ccccccc-chhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--hCCCCCCccccccCCCCCCChhHHHHHH
Confidence 9864221 12234567889999999999999998 78889999999988 987666678887764 3456 66777
Q ss_pred HHHHHHHHhhc-CCceEEEEEeceEEcCCCC------c---ccchHHHH-HHHcCC-C-C---------CCCcceeeecc
Q 020476 170 REWEGTALKVN-KDVRLALIRIGIVLGKDGG------A---LAKMIPLF-MMFAGG-P-L---------GSGQQWFSWIH 227 (325)
Q Consensus 170 ~~~~~~~~~~~-~~~~~~ilRp~~i~g~~~~------~---~~~~~~~~-~~~~~~-~-~---------~~~~~~~~~v~ 227 (325)
.|.....+... .+++++++|++.+||+... . ...+.+.+ +...+. + + .++.+.++++|
T Consensus 156 ~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~ 235 (338)
T PRK10675 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_pred HHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEE
Confidence 77666665543 4799999999999997321 0 11233333 222221 1 1 25678899999
Q ss_pred HHHHHHHHHHHHcCC--C-CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCc-cHHHHHHHhCccceeeccCcccChhH
Q 020476 228 LDDIVNLIYEALSNP--S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPAR 303 (325)
Q Consensus 228 v~D~a~a~~~~~~~~--~-~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k 303 (325)
++|+|++++.+++.. . .+++||+++++++|+.|+++.+.+.+|++..+.. |... . .......+++|
T Consensus 236 v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~-----~~~~~~~~~~k 305 (338)
T PRK10675 236 VMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPVNYHFAPRRE-----G-----DLPAYWADASK 305 (338)
T ss_pred HHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCCCeeeCCCCC-----C-----chhhhhcCHHH
Confidence 999999999999752 2 2369999999999999999999999997633211 1100 0 11234567888
Q ss_pred HH-HcCCCcccccHHHHHHHHhC
Q 020476 304 AK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 304 ~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
++ .+||+|++ +++++|+++++
T Consensus 306 ~~~~lg~~p~~-~~~~~~~~~~~ 327 (338)
T PRK10675 306 ADRELNWRVTR-TLDEMAQDTWH 327 (338)
T ss_pred HHHHhCCCCcC-cHHHHHHHHHH
Confidence 85 58999999 59999999863
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-35 Score=250.04 Aligned_cols=272 Identities=18% Similarity=0.197 Sum_probs=198.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCCCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIG 99 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~~~~~ 99 (325)
||||||||||||++++++|+++|++|++++|+ .+|+.+.+.+.+++++ +|+|||+|+...
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~-----------------~~d~~~~~~~~~~~~~~~~d~vi~~a~~~~- 62 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS-----------------QLDLTDPEALERLLRAIRPDAVVNTAAYTD- 62 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc-----------------ccCCCCHHHHHHHHHhCCCCEEEECCcccc-
Confidence 68999999999999999999999999999985 1688899999988875 599999998642
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGTA 176 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~~ 176 (325)
.......+...++.|+.++.++++++++ .+ .++|++||.++ |+.....+++|++++.+ .| .+|...|.....
T Consensus 63 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~v~~Ss~~v--y~~~~~~~~~E~~~~~~~~~Y~~~K~~~E~~~~~ 137 (287)
T TIGR01214 63 VDGAESDPEKAFAVNALAPQNLARAAAR--HG-ARLVHISTDYV--FDGEGKRPYREDDATNPLNVYGQSKLAGEQAIRA 137 (287)
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHH--cC-CeEEEEeeeee--ecCCCCCCCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence 2222334567889999999999999988 45 48999999988 98766677888776543 45 555555444432
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHH-HH-HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCC-CCCceEEeeC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP-SYRGVINGTA 252 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~-~~~~~~~~~~ 252 (325)
.+.+++++||+.+||++... .+.. .+ ....+.++ ..++..++++|++|+|+++..++..+ ..+++||+++
T Consensus 138 ----~~~~~~ilR~~~v~G~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~ni~~ 211 (287)
T TIGR01214 138 ----AGPNALIVRTSWLYGGGGGR--NFVRTMLRLAGRGEELRVVDDQIGSPTYAKDLARVIAALLQRLARARGVYHLAN 211 (287)
T ss_pred ----hCCCeEEEEeeecccCCCCC--CHHHHHHHHhhcCCCceEecCCCcCCcCHHHHHHHHHHHHhhccCCCCeEEEEC
Confidence 36899999999999997421 1222 22 22333443 22346789999999999999999876 3578999999
Q ss_pred CCCCCHHHHHHHHHHHhCCCCC-CCccHHH--HHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 253 PNPVRLAEMCDHLGNVLGRPSW-LPVPEFA--LKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 253 ~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
++++|+.|+++.+.+.+|++.. ++.+... ...... .+........++++|+++ +||++. +++++|.++++
T Consensus 212 ~~~~s~~e~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~~~~~~lg~~~~--~~~~~l~~~~~ 285 (287)
T TIGR01214 212 SGQCSWYEFAQAIFEEAGADGLLLHPQEVKPISSKEYP-RPARRPAYSVLDNTKLVKTLGTPLP--HWREALRAYLQ 285 (287)
T ss_pred CCCcCHHHHHHHHHHHhCcccccccCceeEeecHHHcC-CCCCCCCccccchHHHHHHcCCCCc--cHHHHHHHHHh
Confidence 9999999999999999997632 2211100 000001 011112345678888875 899654 79999998864
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=259.31 Aligned_cols=293 Identities=19% Similarity=0.220 Sum_probs=210.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc----ccCC----CCCccccCceeecCCchhHhhhC--C
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----LIFP----GKKTRFFPGVMIAEEPQWRDCIQ--G 86 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~----~~~~~~~~~~d~~d~~~~~~~~~--~ 86 (325)
.+++++|+|||||||||++|+++|+++|++|++++|...... .... ......+..+|+.|.+.+.++++ +
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~l~~~~~~~~ 81 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLVFHKVDLRDKEALEKVFASTR 81 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhhcccCccceEEecCcCCHHHHHHHHHhCC
Confidence 344579999999999999999999999999999987543211 0000 00001244578889999988875 6
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY 164 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y 164 (325)
+|+|||+|+.... ......+...++.|+.++.+++++|++ .+++++|++||+++ ||...+.+++|+.+.. ..|
T Consensus 82 ~d~vih~a~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~~~~~Y 156 (352)
T PLN02240 82 FDAVIHFAGLKAV-GESVAKPLLYYDNNLVGTINLLEVMAK--HGCKKLVFSSSATV--YGQPEEVPCTEEFPLSATNPY 156 (352)
T ss_pred CCEEEEccccCCc-cccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCCHH
Confidence 8999999986422 122345677899999999999999998 67889999999988 9876667788887654 356
Q ss_pred -HHHHHHHHHHHHHhh-cCCceEEEEEeceEEcCCCC---------cccchHHHH-HHHcCC--CC---------CCCcc
Q 020476 165 -LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFAGG--PL---------GSGQQ 221 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~-~~~~~~~ilRp~~i~g~~~~---------~~~~~~~~~-~~~~~~--~~---------~~~~~ 221 (325)
.+|...|.....+.. ..+++++++|++++||+... ....+.+.+ ....+. ++ +++.+
T Consensus 157 ~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 236 (352)
T PLN02240 157 GRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTG 236 (352)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCE
Confidence 677777776665543 35789999999999997421 112233333 222222 11 26788
Q ss_pred eeeeccHHHHHHHHHHHHcCC----CC-CceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccC
Q 020476 222 WFSWIHLDDIVNLIYEALSNP----SY-RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEG 296 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~----~~-~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (325)
.++|+|++|+|++++.++... .. +++||+++++++|++|+++.+++.+|++..+..... ..+ ....
T Consensus 237 ~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~----~~~-----~~~~ 307 (352)
T PLN02240 237 VRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKIPLKLAPR----RPG-----DAEE 307 (352)
T ss_pred EEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCCCceeCCC----CCC-----Chhh
Confidence 999999999999999888642 22 469999999999999999999999997633221110 001 1122
Q ss_pred cccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 297 QRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 297 ~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
...+++|++ +|||+|++ +++++|++++
T Consensus 308 ~~~d~~k~~~~lg~~p~~-~l~~~l~~~~ 335 (352)
T PLN02240 308 VYASTEKAEKELGWKAKY-GIDEMCRDQW 335 (352)
T ss_pred hhcCHHHHHHHhCCCCCC-CHHHHHHHHH
Confidence 345677886 58999999 5999999886
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=248.43 Aligned_cols=249 Identities=20% Similarity=0.257 Sum_probs=184.5
Q ss_pred EEECCCchHHHHHHHHHHhCC--CeEEEEecCCCccccc-CCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 24 SVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 24 lI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|||||+||||++|+++|+++| ++|+++++++...... ........+..+|+.|.+++.++++++|+|||+|+....
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~~~~~Di~d~~~l~~a~~g~d~V~H~Aa~~~~- 79 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFLKDLQKSGVKEYIQGDITDPESLEEALEGVDVVFHTAAPVPP- 79 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccchhhhcccceeEEEeccccHHHHHHHhcCCceEEEeCccccc-
Confidence 699999999999999999999 7999999877653311 111111115578999999999999999999999996422
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC-CCCce---ecCCCCC----CCch-HHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SETEV---FDESSPS----GNDY-LAEVCRE 171 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~-~~~~~---~~e~~~~----~~~y-~~k~~~~ 171 (325)
+.....+.++++|+.||++++++|++ .+++++||+||.++ ++. ....+ .+|+.+. ...| .+|..+|
T Consensus 80 -~~~~~~~~~~~vNV~GT~nvl~aa~~--~~VkrlVytSS~~v--v~~~~~~~~~~~~dE~~~~~~~~~~~Y~~SK~~AE 154 (280)
T PF01073_consen 80 -WGDYPPEEYYKVNVDGTRNVLEAARK--AGVKRLVYTSSISV--VFDNYKGDPIINGDEDTPYPSSPLDPYAESKALAE 154 (280)
T ss_pred -cCcccHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcCcce--eEeccCCCCcccCCcCCcccccccCchHHHHHHHH
Confidence 22456788999999999999999999 89999999999998 554 11222 2454442 2356 6777776
Q ss_pred HHHHHHhh---c--CCceEEEEEeceEEcCCCCcccc-hHHHHHHHcCC-CCCCCcceeeeccHHHHHHHHHHHHcC---
Q 020476 172 WEGTALKV---N--KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSN--- 241 (325)
Q Consensus 172 ~~~~~~~~---~--~~~~~~ilRp~~i~g~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~v~v~D~a~a~~~~~~~--- 241 (325)
.+...... + ..+.+++|||+.|||+++..... +....+..... .++++....+++|++|+|.+++.+.+.
T Consensus 155 ~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~ 234 (280)
T PF01073_consen 155 KAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLE 234 (280)
T ss_pred HHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhcc
Confidence 66655544 1 24999999999999998754422 22222211111 247777889999999999999988652
Q ss_pred C----C-CCceEEeeCCCCCC-HHHHHHHHHHHhCCCC-C-CCcc
Q 020476 242 P----S-YRGVINGTAPNPVR-LAEMCDHLGNVLGRPS-W-LPVP 278 (325)
Q Consensus 242 ~----~-~~~~~~~~~~~~~s-~~e~~~~i~~~~g~~~-~-~~~~ 278 (325)
+ . .++.|++.+++|++ ++||.+.+.+.+|.+. . +++|
T Consensus 235 ~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~~~~~lp 279 (280)
T PF01073_consen 235 PGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPPKSISLP 279 (280)
T ss_pred ccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCCcccCCC
Confidence 2 2 44599999999999 9999999999999873 2 4444
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=251.23 Aligned_cols=281 Identities=19% Similarity=0.204 Sum_probs=199.7
Q ss_pred EEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh----CCCCEEEECCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLAGTP 97 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----~~~d~vi~~a~~~ 97 (325)
|||||||||||+++++.|++.|+ +|.+++|..... ....... .....|+.+.+.+..+. .++|+|||||+..
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~~~~~--~~~~~d~~~~~~~~~~~~~~~~~~D~vvh~A~~~ 77 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFLNLAD--LVIADYIDKEDFLDRLEKGAFGKIEAIFHQGACS 77 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhhhhhh--eeeeccCcchhHHHHHHhhccCCCCEEEECcccc
Confidence 69999999999999999999997 788887765332 1111000 12234555666666554 3799999999964
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC---CCCch-HHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGNDY-LAEVCREWE 173 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~---~~~~y-~~k~~~~~~ 173 (325)
. ....++...+++|+.++.+++++|++ .+. ++||+||+++ |+.... +.+|+++ +...| .+|...|..
T Consensus 78 ~---~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~-~~v~~SS~~v--y~~~~~-~~~e~~~~~~p~~~Y~~sK~~~e~~ 148 (314)
T TIGR02197 78 D---TTETDGEYMMENNYQYSKRLLDWCAE--KGI-PFIYASSAAT--YGDGEA-GFREGRELERPLNVYGYSKFLFDQY 148 (314)
T ss_pred C---ccccchHHHHHHHHHHHHHHHHHHHH--hCC-cEEEEccHHh--cCCCCC-CcccccCcCCCCCHHHHHHHHHHHH
Confidence 2 22345677889999999999999998 565 7999999988 986543 4556554 34457 677777766
Q ss_pred HHHHhh--cCCceEEEEEeceEEcCCCCcc---cchHHH-H-HHHcCCCC---------CCCcceeeeccHHHHHHHHHH
Q 020476 174 GTALKV--NKDVRLALIRIGIVLGKDGGAL---AKMIPL-F-MMFAGGPL---------GSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 174 ~~~~~~--~~~~~~~ilRp~~i~g~~~~~~---~~~~~~-~-~~~~~~~~---------~~~~~~~~~v~v~D~a~a~~~ 237 (325)
...+.. ..+++++++||+.+||++.... ..++.. + ....+.++ +++.+.++++|++|+++++..
T Consensus 149 ~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~ 228 (314)
T TIGR02197 149 VRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLW 228 (314)
T ss_pred HHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHH
Confidence 654322 2367999999999999975321 122222 2 33333322 467788999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC---CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCccc
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW---LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKY 313 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~ 313 (325)
++.. ...++||+++++++|+.|+++.+.+.+|.+.. .+.|.... ........++++|+++ +||+|++
T Consensus 229 ~~~~-~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~~l~~~p~~ 299 (314)
T TIGR02197 229 LLEN-GVSGIFNLGTGRARSFNDLADAVFKALGKDEKIEYIPMPEALR--------GKYQYFTQADITKLRAAGYYGPFT 299 (314)
T ss_pred HHhc-ccCceEEcCCCCCccHHHHHHHHHHHhCCCCcceeccCccccc--------cccccccccchHHHHHhcCCCCcc
Confidence 9988 45679999999999999999999999997632 22332110 0011234577888864 7999999
Q ss_pred ccHHHHHHHHhC
Q 020476 314 RYVKDALKAIMS 325 (325)
Q Consensus 314 ~~~~~~l~~~~~ 325 (325)
+++++|+++++
T Consensus 300 -~l~~~l~~~~~ 310 (314)
T TIGR02197 300 -TLEEGVKDYVQ 310 (314)
T ss_pred -cHHHHHHHHHH
Confidence 59999999863
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-34 Score=235.45 Aligned_cols=268 Identities=17% Similarity=0.197 Sum_probs=211.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|+|||||++|++|+.|.+.|. .+++|++++|.. +|+.|++.+.++++ ++|+|||+|++.
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~-----------------~Ditd~~~v~~~i~~~~PDvVIn~AAyt- 61 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE-----------------LDITDPDAVLEVIRETRPDVVINAAAYT- 61 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc-----------------ccccChHHHHHHHHhhCCCEEEECcccc-
Confidence 569999999999999999998 678999999866 79999999999997 689999999975
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
.++.++.+++..+.+|..++.+++++|++ .+ -++||+||..| |....+.|+.|++++.| .| .+|...|....
T Consensus 62 ~vD~aE~~~e~A~~vNa~~~~~lA~aa~~--~g-a~lVhiSTDyV--FDG~~~~~Y~E~D~~~P~nvYG~sKl~GE~~v~ 136 (281)
T COG1091 62 AVDKAESEPELAFAVNATGAENLARAAAE--VG-ARLVHISTDYV--FDGEKGGPYKETDTPNPLNVYGRSKLAGEEAVR 136 (281)
T ss_pred ccccccCCHHHHHHhHHHHHHHHHHHHHH--hC-CeEEEeecceE--ecCCCCCCCCCCCCCCChhhhhHHHHHHHHHHH
Confidence 56778888999999999999999999999 55 47999999999 88788889999998765 34 55655555443
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 253 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~ 253 (325)
. .+.+..|+|.+++||..++++ ...++ ....++++ ...++..++++..|+|+++..++......|+||+++.
T Consensus 137 ~----~~~~~~I~Rtswv~g~~g~nF--v~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~~~~~yH~~~~ 210 (281)
T COG1091 137 A----AGPRHLILRTSWVYGEYGNNF--VKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEKEGGVYHLVNS 210 (281)
T ss_pred H----hCCCEEEEEeeeeecCCCCCH--HHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccccCcEEEEeCC
Confidence 3 357899999999999976444 22333 33445555 5567888999999999999999988776779999999
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCC--ccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHHHHhC
Q 020476 254 NPVRLAEMCDHLGNVLGRPSWLP--VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 254 ~~~s~~e~~~~i~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
..+||.||++.|.+.++.+..+. ........ .-.....+.++++|++ .+|++|+ +|+++++++++
T Consensus 211 g~~Swydfa~~I~~~~~~~~~v~~~~~~~~~~~-----~a~RP~~S~L~~~k~~~~~g~~~~--~w~~~l~~~~~ 278 (281)
T COG1091 211 GECSWYEFAKAIFEEAGVDGEVIEPIASAEYPT-----PAKRPANSSLDTKKLEKAFGLSLP--EWREALKALLD 278 (281)
T ss_pred CcccHHHHHHHHHHHhCCCccccccccccccCc-----cCCCCcccccchHHHHHHhCCCCc--cHHHHHHHHHh
Confidence 88999999999999999664221 11111111 1112345677778875 5899888 79999998864
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-36 Score=256.62 Aligned_cols=269 Identities=18% Similarity=0.251 Sum_probs=185.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
||||||||+|+||++|.+.|.++|++|+++.|+. +|+.|.+.+.+.++ ++|+|||||+..
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~-----------------~dl~d~~~~~~~~~~~~pd~Vin~aa~~- 62 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD-----------------LDLTDPEAVAKLLEAFKPDVVINCAAYT- 62 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC-----------------S-TTSHHHHHHHHHHH--SEEEE------
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh-----------------cCCCCHHHHHHHHHHhCCCeEeccceee-
Confidence 7999999999999999999999999999998762 78889999998886 699999999864
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc-hHHHHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWEGTAL 177 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~-y~~k~~~~~~~~~~ 177 (325)
..+.++.+++..+.+|+.++.+|+++|++ .+ .++||+||..| |+...+.|++|++++.|. .+++.+.+.|....
T Consensus 63 ~~~~ce~~p~~a~~iN~~~~~~la~~~~~--~~-~~li~~STd~V--FdG~~~~~y~E~d~~~P~~~YG~~K~~~E~~v~ 137 (286)
T PF04321_consen 63 NVDACEKNPEEAYAINVDATKNLAEACKE--RG-ARLIHISTDYV--FDGDKGGPYTEDDPPNPLNVYGRSKLEGEQAVR 137 (286)
T ss_dssp -HHHHHHSHHHHHHHHTHHHHHHHHHHHH--CT--EEEEEEEGGG--S-SSTSSSB-TTS----SSHHHHHHHHHHHHHH
T ss_pred cHHhhhhChhhhHHHhhHHHHHHHHHHHH--cC-CcEEEeeccEE--EcCCcccccccCCCCCCCCHHHHHHHHHHHHHH
Confidence 45566778999999999999999999998 45 58999999999 987778889999887653 25544455555544
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCC----CCceEEe
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS----YRGVING 250 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~----~~~~~~~ 250 (325)
... -++.|+|++++||+.... +...+ ....++++ ...+..+++++++|+|+++..++++.. ..|+||+
T Consensus 138 ~~~--~~~~IlR~~~~~g~~~~~---~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~~~Giyh~ 212 (286)
T PF04321_consen 138 AAC--PNALILRTSWVYGPSGRN---FLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGASPWGIYHL 212 (286)
T ss_dssp HH---SSEEEEEE-SEESSSSSS---HHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GGG-EEEE-
T ss_pred Hhc--CCEEEEecceecccCCCc---hhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccccceeEEE
Confidence 432 389999999999994432 23222 33455555 445778899999999999999998764 3599999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHh
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~ 324 (325)
++++.+|+.||++.+++.+|.+.. .+.+...... ......+..++++|++. +|++++ +|+++|++++
T Consensus 213 ~~~~~~S~~e~~~~i~~~~~~~~~~i~~~~~~~~~~-----~~~rp~~~~L~~~kl~~~~g~~~~--~~~~~l~~~~ 282 (286)
T PF04321_consen 213 SGPERVSRYEFAEAIAKILGLDPELIKPVSSSEFPR-----AAPRPRNTSLDCRKLKNLLGIKPP--PWREGLEELV 282 (286)
T ss_dssp --BS-EEHHHHHHHHHHHHTHCTTEEEEESSTTSTT-----SSGS-SBE-B--HHHHHCTTS-----BHHHHHHHHH
T ss_pred ecCcccCHHHHHHHHHHHhCCCCceEEecccccCCC-----CCCCCCcccccHHHHHHccCCCCc--CHHHHHHHHH
Confidence 999999999999999999997642 1222222111 11123467788888876 699998 8999999886
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=256.22 Aligned_cols=277 Identities=19% Similarity=0.198 Sum_probs=192.9
Q ss_pred hhcCCeEEEE----CCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------CCccccCceeecCCchhHhh
Q 020476 17 QASQMTVSVT----GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 17 ~~~~~~ilI~----GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~d~~~~~~~ 83 (325)
..++|+|||| |||||||++|+++|++.||+|++++|+.......... .....+..+|+.| +.++
T Consensus 49 ~~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d---~~~~ 125 (378)
T PLN00016 49 AVEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTVWGDPAD---VKSK 125 (378)
T ss_pred ccccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEEEecHHH---HHhh
Confidence 4456799999 9999999999999999999999999987542211100 0001122334433 5554
Q ss_pred h--CCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 84 I--QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 84 ~--~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+ .++|+|||+++. +..++.+++++|++ .+++++||+||.++ |+.....+..|+++..
T Consensus 126 ~~~~~~d~Vi~~~~~-----------------~~~~~~~ll~aa~~--~gvkr~V~~SS~~v--yg~~~~~p~~E~~~~~ 184 (378)
T PLN00016 126 VAGAGFDVVYDNNGK-----------------DLDEVEPVADWAKS--PGLKQFLFCSSAGV--YKKSDEPPHVEGDAVK 184 (378)
T ss_pred hccCCccEEEeCCCC-----------------CHHHHHHHHHHHHH--cCCCEEEEEccHhh--cCCCCCCCCCCCCcCC
Confidence 4 479999999763 14467899999998 78999999999998 9877666777766654
Q ss_pred CchHHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHH-H-HHHcCCCC---CCCcceeeeccHHHHHHHHH
Q 020476 162 NDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPL-F-MMFAGGPL---GSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~~~~v~v~D~a~a~~ 236 (325)
+.. +|...|... .+.+++++++||+++||++.... +... + +...+.++ +++.+.++++|++|+|++++
T Consensus 185 p~~-sK~~~E~~l----~~~~l~~~ilRp~~vyG~~~~~~--~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~ 257 (378)
T PLN00016 185 PKA-GHLEVEAYL----QKLGVNWTSFRPQYIYGPGNNKD--CEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFA 257 (378)
T ss_pred Ccc-hHHHHHHHH----HHcCCCeEEEeceeEECCCCCCc--hHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHH
Confidence 432 554444322 34589999999999999975321 2111 1 33445543 56788899999999999999
Q ss_pred HHHcCCC-CCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCccc
Q 020476 237 EALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKY 313 (325)
Q Consensus 237 ~~~~~~~-~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~ 313 (325)
.+++++. .+++||+++++.+|+.|+++.+++.+|.+.. +..+............+........+++|++ +|||+|++
T Consensus 258 ~~l~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~d~~ka~~~LGw~p~~ 337 (378)
T PLN00016 258 LVVGNPKAAGQIFNIVSDRAVTFDGMAKACAKAAGFPEEIVHYDPKAVGFGAKKAFPFRDQHFFASPRKAKEELGWTPKF 337 (378)
T ss_pred HHhcCccccCCEEEecCCCccCHHHHHHHHHHHhCCCCceeecCccccCccccccccccccccccCHHHHHHhcCCCCCC
Confidence 9998864 4569999999999999999999999998642 2222221110000001111223345778886 58999999
Q ss_pred ccHHHHHHHHhC
Q 020476 314 RYVKDALKAIMS 325 (325)
Q Consensus 314 ~~~~~~l~~~~~ 325 (325)
+++|+|.++++
T Consensus 338 -~l~egl~~~~~ 348 (378)
T PLN00016 338 -DLVEDLKDRYE 348 (378)
T ss_pred -CHHHHHHHHHH
Confidence 59999998863
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=245.53 Aligned_cols=289 Identities=20% Similarity=0.251 Sum_probs=207.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
|||||||||+||++++++|+++|++|++++|............. ......+|+.+.+.+.++++ ++|+|||+|+.
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vv~~ag~ 80 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGERITRVTFVEGDLRDRELLDRLFEEHKIDAVIHFAGL 80 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhccccceEEEECCCCCHHHHHHHHHhCCCcEEEECccc
Confidence 68999999999999999999999999988764432111111000 01133578889999988886 69999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWE 173 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~ 173 (325)
.... .........++.|+.++.+++++|.+ .+++++|++||.++ ||.....+++|+++.. ..| .+|...|..
T Consensus 81 ~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~ss~~~--~g~~~~~~~~e~~~~~~~~~y~~sK~~~e~~ 155 (328)
T TIGR01179 81 IAVG-ESVQDPLKYYRNNVVNTLNLLEAMQQ--TGVKKFIFSSSAAV--YGEPSSIPISEDSPLGPINPYGRSKLMSERI 155 (328)
T ss_pred cCcc-hhhcCchhhhhhhHHHHHHHHHHHHh--cCCCEEEEecchhh--cCCCCCCCccccCCCCCCCchHHHHHHHHHH
Confidence 4221 12334556788999999999999998 67789999999887 8876666778877643 456 778877777
Q ss_pred HHHHhhc-CCceEEEEEeceEEcCCCCc--------ccchHHHH-HHHc--CC---------CCCCCcceeeeccHHHHH
Q 020476 174 GTALKVN-KDVRLALIRIGIVLGKDGGA--------LAKMIPLF-MMFA--GG---------PLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 174 ~~~~~~~-~~~~~~ilRp~~i~g~~~~~--------~~~~~~~~-~~~~--~~---------~~~~~~~~~~~v~v~D~a 232 (325)
...+..+ .+++++++||+.+||+.... ...+++.+ .... .. +..++...++++|++|++
T Consensus 156 ~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a 235 (328)
T TIGR01179 156 LRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLA 235 (328)
T ss_pred HHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHH
Confidence 7666555 68999999999999985321 12233333 2221 11 123567789999999999
Q ss_pred HHHHHHHcCC---CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCc-cHHHHHHHhCccceeeccCcccChhHHH-Hc
Q 020476 233 NLIYEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKAVLGEGAFVVLEGQRVVPARAK-EL 307 (325)
Q Consensus 233 ~a~~~~~~~~---~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l 307 (325)
+++..++... ..+++||+++++++|++|+++.+++.+|++..+.. +.. .+. ......+++|++ ++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~l 305 (328)
T TIGR01179 236 DAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFPVELAPRR-----PGD-----PASLVADASKIRREL 305 (328)
T ss_pred HHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcceEeCCCC-----Ccc-----ccchhcchHHHHHHh
Confidence 9999998752 24579999999999999999999999997643221 110 000 112335677775 58
Q ss_pred CCCcccccHHHHHHHHhC
Q 020476 308 GFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~~ 325 (325)
||+|++++++++|+++++
T Consensus 306 g~~p~~~~l~~~~~~~~~ 323 (328)
T TIGR01179 306 GWQPKYTDLEIIIKTAWR 323 (328)
T ss_pred CCCCCcchHHHHHHHHHH
Confidence 999999669999998863
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-33 Score=245.04 Aligned_cols=284 Identities=15% Similarity=0.114 Sum_probs=194.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------CCccccCceeecCCchhHhhhCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------KKTRFFPGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~~~~~~~~~d~~d~~~~~~~~~~~d 88 (325)
.++|+||||||+||||++++++|+++|++|+++.|+.+....+... .....+..+|+.|.+.+.++++++|
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~i~~~d 130 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIWTVMANLTEPESLHEAFDGCA 130 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceEEEEcCCCCHHHHHHHHHhcc
Confidence 3467999999999999999999999999999988875432211100 0001244578999999999999999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC--CC--ceecCCCC-----
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ET--EVFDESSP----- 159 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~--~~--~~~~e~~~----- 159 (325)
+|||+|+....... ........++|+.++.+++++|++. .+++++||+||..+..||.. .. .+++|+.+
T Consensus 131 ~V~hlA~~~~~~~~-~~~~~~~~~~nv~gt~~llea~~~~-~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~~~~~~~~ 208 (367)
T PLN02686 131 GVFHTSAFVDPAGL-SGYTKSMAELEAKASENVIEACVRT-ESVRKCVFTSSLLACVWRQNYPHDLPPVIDEESWSDESF 208 (367)
T ss_pred EEEecCeeeccccc-ccccchhhhhhHHHHHHHHHHHHhc-CCccEEEEeccHHHhcccccCCCCCCcccCCCCCCChhh
Confidence 99999986422211 1122356678999999999999872 26899999999743237642 22 23555432
Q ss_pred ---CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 ---SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ---~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
+...| .+|...|.....+....+++++++||+++|||+..... .........+.....++..++++|++|+|+++
T Consensus 209 ~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~-~~~~~~~~~g~~~~~g~g~~~~v~V~Dva~A~ 287 (367)
T PLN02686 209 CRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRN-STATIAYLKGAQEMLADGLLATADVERLAEAH 287 (367)
T ss_pred cccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCC-ChhHHHHhcCCCccCCCCCcCeEEHHHHHHHH
Confidence 22357 78888888887777777999999999999999753211 11122223332211122335799999999999
Q ss_pred HHHHcCC---CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCc
Q 020476 236 YEALSNP---SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPF 311 (325)
Q Consensus 236 ~~~~~~~---~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p 311 (325)
+.+++.. ..+++| +++++++++.|+++.+.+.+|.+..+...... ..++ .....++++|++ .|||.|
T Consensus 288 ~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~~~~~~~~~---~~~d-----~~~~~~d~~kl~~~l~~~~ 358 (367)
T PLN02686 288 VCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPINKIAGNSS---SDDT-----PARFELSNKKLSRLMSRTR 358 (367)
T ss_pred HHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCCCcCCCchh---hcCC-----cccccccHHHHHHHHHHhh
Confidence 9999852 345688 88888999999999999999976322111110 0122 234556677785 599998
Q ss_pred cc
Q 020476 312 KY 313 (325)
Q Consensus 312 ~~ 313 (325)
+-
T Consensus 359 ~~ 360 (367)
T PLN02686 359 RC 360 (367)
T ss_pred hc
Confidence 74
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-33 Score=226.95 Aligned_cols=291 Identities=21% Similarity=0.232 Sum_probs=223.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc----cc---cCCCCCccccCceeecCCchhHhhhC--CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----EL---IFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~---~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~v 90 (325)
.++||||||.||||+|.+-+|+++|+.|.+++.-.+.. .+ +........+..+|+.|...++++++ ++|.|
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V 81 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAV 81 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceE
Confidence 36899999999999999999999999999998743321 11 11111222356789999999999997 79999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---CCch-HH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LA 166 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---~~~y-~~ 166 (325)
+|+|+.. .+..+.+++..++..|+.++.++++.+++ .+++.+||.||+.+ ||.+...|++|+++. .+.| .+
T Consensus 82 ~Hfa~~~-~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~--~~~~~~V~sssatv--YG~p~~ip~te~~~t~~p~~pyg~t 156 (343)
T KOG1371|consen 82 MHFAALA-AVGESMENPLSYYHNNIAGTLNLLEVMKA--HNVKALVFSSSATV--YGLPTKVPITEEDPTDQPTNPYGKT 156 (343)
T ss_pred Eeehhhh-ccchhhhCchhheehhhhhHHHHHHHHHH--cCCceEEEecceee--ecCcceeeccCcCCCCCCCCcchhh
Confidence 9999975 34556677789999999999999999999 78999999999999 999999999998875 4567 77
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcC--C----C---CcccchHHHH-HHHc---------CCCC--CCCcceeee
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGK--D----G---GALAKMIPLF-MMFA---------GGPL--GSGQQWFSW 225 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~--~----~---~~~~~~~~~~-~~~~---------~~~~--~~~~~~~~~ 225 (325)
|...|.....+....++.++.||..+++|. . . +...++.+.. +... +.+. .+++..+++
T Consensus 157 K~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdy 236 (343)
T KOG1371|consen 157 KKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDY 236 (343)
T ss_pred hHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCCeeecc
Confidence 888888888888878899999999999993 1 1 1112333211 1111 1122 467899999
Q ss_pred ccHHHHHHHHHHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChh
Q 020476 226 IHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPA 302 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
+|+-|+|+..+.++.... ..++||++.+...++.+|+..+++.+|.+.++++-. ...++......+..+.
T Consensus 237 i~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v~----~R~gdv~~~ya~~~~a--- 309 (343)
T KOG1371|consen 237 IHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVVP----RRNGDVAFVYANPSKA--- 309 (343)
T ss_pred eeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCccccC----CCCCCceeeeeChHHH---
Confidence 999999999999998755 345999999999999999999999999874332221 1345544444444433
Q ss_pred HHHHcCCCcccccHHHHHHHHh
Q 020476 303 RAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 303 k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
.++|||+|.+ +++++++++.
T Consensus 310 -~~elgwk~~~-~iee~c~dlw 329 (343)
T KOG1371|consen 310 -QRELGWKAKY-GLQEMLKDLW 329 (343)
T ss_pred -HHHhCCcccc-CHHHHHHHHH
Confidence 5789999999 4999999874
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=238.90 Aligned_cols=267 Identities=18% Similarity=0.238 Sum_probs=190.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCC--CCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.|+||||||+||||++++++|+++| ++|++++|+.......... .....+..+|+.|.+.+.++++++|+|||+||
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~Ag 83 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAAA 83 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECcc
Confidence 4799999999999999999999986 7899999876542211100 01112446799999999999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG 174 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~ 174 (325)
... ......++...+++|+.++.++++++++ .+++++|++||... + .+...| .+|...|...
T Consensus 84 ~~~-~~~~~~~~~~~~~~Nv~g~~~ll~aa~~--~~~~~iV~~SS~~~--~------------~p~~~Y~~sK~~~E~l~ 146 (324)
T TIGR03589 84 LKQ-VPAAEYNPFECIRTNINGAQNVIDAAID--NGVKRVVALSTDKA--A------------NPINLYGATKLASDKLF 146 (324)
T ss_pred cCC-CchhhcCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeCCCC--C------------CCCCHHHHHHHHHHHHH
Confidence 642 2223344567899999999999999998 67889999998643 1 123457 7787777666
Q ss_pred HHHh---hcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCC---CCCCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 175 TALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGG---PLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 175 ~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~---~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
..+. ...|++++++||+++||++.. +++.+ ....+. ++.++.+.++|+|++|++++++.++++...+.
T Consensus 147 ~~~~~~~~~~gi~~~~lR~g~v~G~~~~----~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~~~~~ 222 (324)
T TIGR03589 147 VAANNISGSKGTRFSVVRYGNVVGSRGS----VVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERMLGGE 222 (324)
T ss_pred HHHHhhccccCcEEEEEeecceeCCCCC----cHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhCCCCC
Confidence 4432 346999999999999998753 23333 222333 34677888999999999999999998754345
Q ss_pred eEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHH
Q 020476 247 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK 321 (325)
Q Consensus 247 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~ 321 (325)
+| ++.+..+++.|+++.+.+....+. .+.+ .++. .....++.+|++ .+||+|++ ++++++.
T Consensus 223 ~~-~~~~~~~sv~el~~~i~~~~~~~~-~~~~-------~g~~----~~~~~~~~~~~~~~lg~~~~~-~l~~~~~ 284 (324)
T TIGR03589 223 IF-VPKIPSMKITDLAEAMAPECPHKI-VGIR-------PGEK----LHEVMITEDDARHTYELGDYY-AILPSIS 284 (324)
T ss_pred EE-ccCCCcEEHHHHHHHHHhhCCeeE-eCCC-------CCch----hHhhhcChhhhhhhcCCCCeE-EEccccc
Confidence 77 466667999999999998654221 0111 1100 011334566674 59999999 5998875
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-31 Score=229.39 Aligned_cols=273 Identities=16% Similarity=0.150 Sum_probs=192.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc------ccCCCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
.++|+|||||||||++++++|+++|++|++++|+.+... .+........+..+|+.|.+.+.+++.++|.|+|+
T Consensus 6 ~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~~~~~l~~~d~v~~~ 85 (297)
T PLN02583 6 SKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETEIEKEIRGLSCEEERLKVFDVDPLDYHSILDALKGCSGLFCC 85 (297)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhhHHHHHHhcccCCCceEEEEecCCCHHHHHHHHcCCCEEEEe
Confidence 468999999999999999999999999999999643211 11100001123457999999999999999999998
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC---CCceecCCCCCCC--------
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS---ETEVFDESSPSGN-------- 162 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~---~~~~~~e~~~~~~-------- 162 (325)
++.... . ......++++|+.++.+++++|.+. .+++++|++||..+..|+.. ...+++|+++..+
T Consensus 86 ~~~~~~--~-~~~~~~~~~~nv~gt~~ll~aa~~~-~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~~~~~~~~~ 161 (297)
T PLN02583 86 FDPPSD--Y-PSYDEKMVDVEVRAAHNVLEACAQT-DTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQNFCRKFKL 161 (297)
T ss_pred CccCCc--c-cccHHHHHHHHHHHHHHHHHHHHhc-CCccEEEEecchHheecccccCCCCCCCCcccCCCHHHHhhccc
Confidence 764321 1 1235688999999999999999873 25789999999876323311 2335677665321
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.| .+|...|...+.+.+..+++++++||++|||++..... +. ..+.....+...++++|++|+|++++.++++
T Consensus 162 ~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~---~~---~~~~~~~~~~~~~~~v~V~Dva~a~~~al~~ 235 (297)
T PLN02583 162 WHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN---PY---LKGAAQMYENGVLVTVDVNFLVDAHIRAFED 235 (297)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch---hh---hcCCcccCcccCcceEEHHHHHHHHHHHhcC
Confidence 46 67888888887776667999999999999999753221 11 1121111122346799999999999999998
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCc
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPF 311 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p 311 (325)
+...+.|+++++....+.++++++.+.+..- ++|...... .. ......++++|+++||+++
T Consensus 236 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~p~~---~~~~~~~~~-~~-----~~~~~~~~~~k~~~l~~~~ 296 (297)
T PLN02583 236 VSSYGRYLCFNHIVNTEEDAVKLAQMLSPLI---PSPPPYEMQ-GS-----EVYQQRIRNKKLNKLMEDF 296 (297)
T ss_pred cccCCcEEEecCCCccHHHHHHHHHHhCCCC---CCCCccccc-CC-----CccccccChHHHHHhCccc
Confidence 8777899888887566788999999988643 222110000 00 1134667889999999986
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-32 Score=234.00 Aligned_cols=271 Identities=16% Similarity=0.129 Sum_probs=187.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|||+|||||||+|++++++|+++||+|++++|+.++....... ...+..+|+.|++.+.++++++|+|||+++..
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~--~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~--- 75 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEW--GAELVYGDLSLPETLPPSFKGVTAIIDASTSR--- 75 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhc--CCEEEECCCCCHHHHHHHHCCCCEEEECCCCC---
Confidence 6999999999999999999999999999999986543222111 11245679999999999999999999997632
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhh
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV 179 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~ 179 (325)
.......+++|+.++.+++++|++ .+++|+||+||.++..|+ ...| ..|...|. +..
T Consensus 76 ---~~~~~~~~~~~~~~~~~l~~aa~~--~gvkr~I~~Ss~~~~~~~-------------~~~~~~~K~~~e~----~l~ 133 (317)
T CHL00194 76 ---PSDLYNAKQIDWDGKLALIEAAKA--AKIKRFIFFSILNAEQYP-------------YIPLMKLKSDIEQ----KLK 133 (317)
T ss_pred ---CCCccchhhhhHHHHHHHHHHHHH--cCCCEEEEeccccccccC-------------CChHHHHHHHHHH----HHH
Confidence 112345677899999999999999 789999999986541121 1223 34433332 223
Q ss_pred cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC--CCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCCC
Q 020476 180 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV 256 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~~ 256 (325)
..+++++++||+.+|+...... .. ....+.++ ..+...++++|++|+|+++..++.++. .+++||+++++++
T Consensus 134 ~~~l~~tilRp~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~ni~g~~~~ 208 (317)
T CHL00194 134 KSGIPYTIFRLAGFFQGLISQY--AI---PILEKQPIWITNESTPISYIDTQDAAKFCLKSLSLPETKNKTFPLVGPKSW 208 (317)
T ss_pred HcCCCeEEEeecHHhhhhhhhh--hh---hhccCCceEecCCCCccCccCHHHHHHHHHHHhcCccccCcEEEecCCCcc
Confidence 4689999999998886421100 11 11122332 456677899999999999999998765 4569999999999
Q ss_pred CHHHHHHHHHHHhCCCC-CCCccHHHHHH---HhCcc---c---e-------eeccCcc-cChhHHH-HcCCCcc--ccc
Q 020476 257 RLAEMCDHLGNVLGRPS-WLPVPEFALKA---VLGEG---A---F-------VVLEGQR-VVPARAK-ELGFPFK--YRY 315 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~-~~~~~~~~~~~---~~~~~---~---~-------~~~~~~~-~~~~k~~-~lg~~p~--~~~ 315 (325)
|+.|+++.+++.+|++. ..++|.+.... +.... . . ...++.. .+.++.+ .+|+.|. . +
T Consensus 209 s~~el~~~~~~~~g~~~~~~~vp~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~p~~~~-~ 287 (317)
T CHL00194 209 NSSEIISLCEQLSGQKAKISRVPLFLLKLLRQITGFFEWTWNISDRLAFVEILNTSNNFSSSMAELYKIFKIDPNELI-S 287 (317)
T ss_pred CHHHHHHHHHHHhCCCCeEEeCCHHHHHHHHHHHhhcccchhhHHHHHHHHHHhcCCCcCCCHHHHHHHhCCChhhhh-h
Confidence 99999999999999873 34555544322 11100 0 0 0112122 2344554 5899984 3 5
Q ss_pred HHHHHHHHh
Q 020476 316 VKDALKAIM 324 (325)
Q Consensus 316 ~~~~l~~~~ 324 (325)
+++++++.+
T Consensus 288 ~~~~~~~~~ 296 (317)
T CHL00194 288 LEDYFQEYF 296 (317)
T ss_pred HHHHHHHHH
Confidence 899888765
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=226.86 Aligned_cols=223 Identities=28% Similarity=0.393 Sum_probs=177.7
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCCCCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPIGT 100 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~~~~~~ 100 (325)
|||||||||||++++++|+++|++|+.+.|+..+........ ...+..+|+.|.+.+.+++++ +|+|||+|+... .
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~~dl~~~~~~~~~~~~~~~d~vi~~a~~~~-~ 78 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKL-NVEFVIGDLTDKEQLEKLLEKANIDVVIHLAAFSS-N 78 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHT-TEEEEESETTSHHHHHHHHHHHTESEEEEEBSSSS-H
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccc-eEEEEEeeccccccccccccccCceEEEEeecccc-c
Confidence 799999999999999999999999999999887653211100 011446899999999999874 599999998642 1
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~ 177 (325)
..........++.|+.++.+++++|++ .+++++||+||..+ |+.....+++|+++. ...| .+|...|.....+
T Consensus 79 ~~~~~~~~~~~~~n~~~~~~ll~~~~~--~~~~~~i~~sS~~~--y~~~~~~~~~e~~~~~~~~~Y~~~K~~~e~~~~~~ 154 (236)
T PF01370_consen 79 PESFEDPEEIIEANVQGTRNLLEAARE--AGVKRFIFLSSASV--YGDPDGEPIDEDSPINPLSPYGASKRAAEELLRDY 154 (236)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHH--HTTSEEEEEEEGGG--GTSSSSSSBETTSGCCHSSHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccc--cccccccccccccc--ccccccccccccccccccccccccccccccccccc
Confidence 112245678888999999999999999 77899999999988 998877788888875 3456 7788888888888
Q ss_pred hhcCCceEEEEEeceEEcCC--CCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC-CCceEE
Q 020476 178 KVNKDVRLALIRIGIVLGKD--GGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVIN 249 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~ 249 (325)
.++.+++++++||+.+||++ ......+++.+ ....++++ +++.+.++++|++|+|++++.+++++. .+++||
T Consensus 155 ~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~~~~~yN 234 (236)
T PF01370_consen 155 AKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKAAGGIYN 234 (236)
T ss_dssp HHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred ccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCCCCCEEE
Confidence 77779999999999999998 12223333333 45566653 788999999999999999999999988 778999
Q ss_pred ee
Q 020476 250 GT 251 (325)
Q Consensus 250 ~~ 251 (325)
++
T Consensus 235 ig 236 (236)
T PF01370_consen 235 IG 236 (236)
T ss_dssp ES
T ss_pred eC
Confidence 85
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.98 E-value=2.6e-30 Score=219.60 Aligned_cols=297 Identities=21% Similarity=0.244 Sum_probs=211.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCC-C---CCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP-G---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~---~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
+.+++||||+||+|++|+++|++++ .+|++++..+.......+ . ........+|+.|...+.++++++ .|+||
T Consensus 4 ~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~i~~a~~~~-~Vvh~ 82 (361)
T KOG1430|consen 4 KLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANSISNAFQGA-VVVHC 82 (361)
T ss_pred CCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhhhhhhccCc-eEEEe
Confidence 4589999999999999999999998 799999987752111111 0 111124568888999999999999 88888
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC----Cch-HHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG----NDY-LAEV 168 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~----~~y-~~k~ 168 (325)
|+... ......+.+.++++|+.+|.+++++|++ .+++++||+||..|...|.. -...+|+.|.. +.| .+|.
T Consensus 83 aa~~~-~~~~~~~~~~~~~vNV~gT~nvi~~c~~--~~v~~lIYtSs~~Vvf~g~~-~~n~~E~~p~p~~~~d~Y~~sKa 158 (361)
T KOG1430|consen 83 AASPV-PDFVENDRDLAMRVNVNGTLNVIEACKE--LGVKRLIYTSSAYVVFGGEP-IINGDESLPYPLKHIDPYGESKA 158 (361)
T ss_pred ccccC-ccccccchhhheeecchhHHHHHHHHHH--hCCCEEEEecCceEEeCCee-cccCCCCCCCccccccccchHHH
Confidence 87653 3344556889999999999999999999 89999999999999533333 23345554422 345 5666
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHc----
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALS---- 240 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~---- 240 (325)
.+|..........++..+++||+.|||+++.... .+... ...++. ++++...-++++++.++.+.+.+..
T Consensus 159 ~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~--~~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~ 236 (361)
T KOG1430|consen 159 LAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEA--LKNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLD 236 (361)
T ss_pred HHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHH--HHccCceEEeeccccccceEEechhHHHHHHHHHHHHh
Confidence 6666555554445799999999999999975431 22222 223333 2666778889999999988886653
Q ss_pred -CCCC-CceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHH----------HhCccc--------eeeccCcc
Q 020476 241 -NPSY-RGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKA----------VLGEGA--------FVVLEGQR 298 (325)
Q Consensus 241 -~~~~-~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~----------~~~~~~--------~~~~~~~~ 298 (325)
.+.. +..|++.+++++...++...+.+.+|.... +..|-+.... ..+... ........
T Consensus 237 ~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~~~~~~p~~l~~~~~~l~e~~~~~l~p~~p~lt~~~v~~~~~~~~ 316 (361)
T KOG1430|consen 237 KSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLPSSIKLPLFLSYFLAYLLEIVYFLLRPYQPILTRFRVALLGVTRT 316 (361)
T ss_pred cCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCCceeecchHHHHHHHHHHHHHHHhccCCCCCcChhheeeeccccc
Confidence 2333 449999999999888888899999998744 5555443221 112111 11233566
Q ss_pred cChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 299 VVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 299 ~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
++.+|++ +|||.|.. ++++++.+++
T Consensus 317 f~~~kA~~~lgY~P~~-~~~e~~~~~~ 342 (361)
T KOG1430|consen 317 FSIEKAKRELGYKPLV-SLEEAIQRTI 342 (361)
T ss_pred cCHHHHHHhhCCCCcC-CHHHHHHHHH
Confidence 6778885 69999999 5999999876
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.4e-30 Score=245.07 Aligned_cols=247 Identities=21% Similarity=0.276 Sum_probs=179.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|||+||||+||||++++++|+++|++|++++|+..... ... ..+..+|+.|.+.+.++++++|+|||||+...
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~--~~~---v~~v~gDL~D~~~l~~al~~vD~VVHlAa~~~-- 73 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW--PSS---ADFIAADIRDATAVESAMTGADVVAHCAWVRG-- 73 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc--ccC---ceEEEeeCCCHHHHHHHHhCCCEEEECCCccc--
Confidence 68999999999999999999999999999999753211 111 12556899999999999999999999998531
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHHHhhc
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN 180 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~ 180 (325)
..+++|+.++.+++++|++ .+++++||+||.. |...|... ..
T Consensus 74 --------~~~~vNv~GT~nLLeAa~~--~gvkr~V~iSS~~------------------------K~aaE~ll----~~ 115 (854)
T PRK05865 74 --------RNDHINIDGTANVLKAMAE--TGTGRIVFTSSGH------------------------QPRVEQML----AD 115 (854)
T ss_pred --------chHHHHHHHHHHHHHHHHH--cCCCeEEEECCcH------------------------HHHHHHHH----HH
Confidence 1457899999999999998 7888999999852 33333222 23
Q ss_pred CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCCC
Q 020476 181 KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV 256 (325)
Q Consensus 181 ~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~~ 256 (325)
.+++++++||+++||++.. .++..+ . ..++ +++...++|+|++|+|+++..+++.+. .+++||+++++.+
T Consensus 116 ~gl~~vILRp~~VYGP~~~---~~i~~l--l-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~~~ggvyNIgsg~~~ 189 (854)
T PRK05865 116 CGLEWVAVRCALIFGRNVD---NWVQRL--F-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTVIDSGPVNLAAPGEL 189 (854)
T ss_pred cCCCEEEEEeceEeCCChH---HHHHHH--h-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCCcCCCeEEEECCCcc
Confidence 5899999999999999631 122111 1 1222 445667899999999999999997543 4679999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccc--eeeccCcccChhHHH-HcCCCcccccHHHHHHHHhC
Q 020476 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
|+.|+++.+.+.... ++.+. . ...+... ........++++|++ .+||+|++ +++++|+++++
T Consensus 190 Si~EIae~l~~~~~~---v~~~~--~-~~~~~~~~~~~~~~~~~~D~sKar~~LGw~P~~-sLeeGL~dti~ 254 (854)
T PRK05865 190 TFRRIAAALGRPMVP---IGSPV--L-RRVTSFAELELLHSAPLMDVTLLRDRWGFQPAW-NAEECLEDFTL 254 (854)
T ss_pred cHHHHHHHHhhhhcc---CCchh--h-hhccchhhhhcccCCccCCHHHHHHHhCCCCCC-CHHHHHHHHHH
Confidence 999999998874321 11110 0 0011110 111123457888886 59999999 59999999863
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.8e-30 Score=197.47 Aligned_cols=295 Identities=58% Similarity=0.954 Sum_probs=245.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHH-----hC----CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQ-----AD----NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~-----~~----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d 88 (325)
.+..+.++-+.+|+|+..|..... .. +|+|++++|++.+.+....+.. ++++-+ .....+.
T Consensus 10 ~~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~ritw~el~---~~Gip~-------sc~a~vn 79 (315)
T KOG3019|consen 10 GKSRDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKARITWPELD---FPGIPI-------SCVAGVN 79 (315)
T ss_pred CccccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCcccccchhc---CCCCce-------ehHHHHh
Confidence 344567888999999988876322 22 3899999999977544333221 222111 2223455
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC-chHHH
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DYLAE 167 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~-~y~~k 167 (325)
++.+++..+. .+|++.-.++.+..-+..++.++++........+.+|.+|..++ |-......++|+++... +|.+.
T Consensus 80 a~g~n~l~P~-rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~--y~pS~s~eY~e~~~~qgfd~~sr 156 (315)
T KOG3019|consen 80 AVGNNALLPI-RRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAV--YVPSESQEYSEKIVHQGFDILSR 156 (315)
T ss_pred hhhhhccCch-hhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEE--eccccccccccccccCChHHHHH
Confidence 5666666553 48888888888888889999999999986556668999999988 98888888999888654 56888
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCce
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~ 247 (325)
...++|..+.......+.+++|.|.|.|.+++....++..+++..|+|+++|++.++|||++|++..+..+++++...|+
T Consensus 157 L~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~~li~~ale~~~v~GV 236 (315)
T KOG3019|consen 157 LCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLVNLIYEALENPSVKGV 236 (315)
T ss_pred HHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHHHHHHHHHhcCCCCce
Confidence 88999988888777899999999999999999998999999999999999999999999999999999999999888999
Q ss_pred EEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhC-ccceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 248 INGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG-EGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 248 ~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
.|-..+++.+..||.+.++.+++++.++++|+....+.+| +-....+..++..+.|+.++||+++|+++.++++++++
T Consensus 237 iNgvAP~~~~n~Ef~q~lg~aL~Rp~~~pvP~fvvqA~fG~erA~~vLeGqKV~Pqral~~Gf~f~yp~vk~Al~~i~~ 315 (315)
T KOG3019|consen 237 INGVAPNPVRNGEFCQQLGSALSRPSWLPVPDFVVQALFGPERATVVLEGQKVLPQRALELGFEFKYPYVKDALRAIMQ 315 (315)
T ss_pred ecccCCCccchHHHHHHHHHHhCCCcccCCcHHHHHHHhCccceeEEeeCCcccchhHhhcCceeechHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999 56677899999999999999999999999999998764
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.5e-31 Score=202.77 Aligned_cols=277 Identities=18% Similarity=0.222 Sum_probs=215.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~ 95 (325)
||||+|+|++|.+|++|.+.+.+.|. +=.++.-+ ..+|+.+.++.++++. ++..|||+|+
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~s----------------kd~DLt~~a~t~~lF~~ekPthVIhlAA 64 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGS----------------KDADLTNLADTRALFESEKPTHVIHLAA 64 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEecc----------------ccccccchHHHHHHHhccCCceeeehHh
Confidence 47999999999999999999999875 22222211 1278888888888885 7999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC----CCCC---ch-HHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAE 167 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~----~~~~---~y-~~k 167 (325)
.++..........++++.|+...-|++..|-+ .++++++++.|++. |++....|++|+- |+.+ .| +.|
T Consensus 65 mVGGlf~N~~ynldF~r~Nl~indNVlhsa~e--~gv~K~vsclStCI--fPdkt~yPIdEtmvh~gpphpsN~gYsyAK 140 (315)
T KOG1431|consen 65 MVGGLFHNNTYNLDFIRKNLQINDNVLHSAHE--HGVKKVVSCLSTCI--FPDKTSYPIDETMVHNGPPHPSNFGYSYAK 140 (315)
T ss_pred hhcchhhcCCCchHHHhhcceechhHHHHHHH--hchhhhhhhcceee--cCCCCCCCCCHHHhccCCCCCCchHHHHHH
Confidence 88776656667789999999999999999999 89999999999999 9998888988853 3332 35 777
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-------cchHHHH-HHHcCC--CC---CCCcceeeeccHHHHHHH
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF-MMFAGG--PL---GSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-------~~~~~~~-~~~~~~--~~---~~~~~~~~~v~v~D~a~a 234 (325)
+........|..++|..++.+-|+++|||.+... +.++..+ .+...+ ++ +.|...|.|+|.+|+|++
T Consensus 141 r~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l 220 (315)
T KOG1431|consen 141 RMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADL 220 (315)
T ss_pred HHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHH
Confidence 7777777888888999999999999999976432 3333333 222222 22 889999999999999999
Q ss_pred HHHHHcCCCCCceEEeeCCC--CCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcc
Q 020476 235 IYEALSNPSYRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFK 312 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~ 312 (325)
+++++.+-+.-+-.+++.++ .+|.+|+++.+.++++....+.......+ |. -...++++|++.++|.|+
T Consensus 221 ~i~vlr~Y~~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l~~DttK~D---Gq------~kKtasnsKL~sl~pd~~ 291 (315)
T KOG1431|consen 221 FIWVLREYEGVEPIILSVGESDEVTIREAAEAVVEAVDFTGKLVWDTTKSD---GQ------FKKTASNSKLRSLLPDFK 291 (315)
T ss_pred HHHHHHhhcCccceEeccCccceeEHHHHHHHHHHHhCCCceEEeeccCCC---CC------cccccchHHHHHhCCCcc
Confidence 99999886655566777776 79999999999999987644333222111 11 124566788999999999
Q ss_pred cccHHHHHHHHhC
Q 020476 313 YRYVKDALKAIMS 325 (325)
Q Consensus 313 ~~~~~~~l~~~~~ 325 (325)
+++++++|.++++
T Consensus 292 ft~l~~ai~~t~~ 304 (315)
T KOG1431|consen 292 FTPLEQAISETVQ 304 (315)
T ss_pred cChHHHHHHHHHH
Confidence 9889999998763
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.1e-29 Score=216.00 Aligned_cols=263 Identities=16% Similarity=0.154 Sum_probs=179.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
+.||||||||+||||++|++.|+++|++|+...+ ++.|.+.+...++ ++|+||||||.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~--------------------~~~~~~~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG--------------------RLENRASLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC--------------------ccCCHHHHHHHHHhcCCCEEEECCcc
Confidence 4579999999999999999999999999975322 2223444555554 79999999997
Q ss_pred CCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC------CceecCCCCCC---Cch-
Q 020476 97 PIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------TEVFDESSPSG---NDY- 164 (325)
Q Consensus 97 ~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~------~~~~~e~~~~~---~~y- 164 (325)
... .++...++.+.+++|+.++.+++++|++ .+++ ++++||+++ |+... +.+++|++++. +.|
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~--~gv~-~v~~sS~~v--y~~~~~~p~~~~~~~~Ee~~p~~~~s~Yg 142 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRE--RGLV-LTNYATGCI--FEYDDAHPLGSGIGFKEEDTPNFTGSFYS 142 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCC-EEEEecceE--eCCCCCCCcccCCCCCcCCCCCCCCCchH
Confidence 532 2234567788999999999999999999 6665 667788877 65322 22467665542 457
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
.+|...|.....+. +..++|+...+|.+......++. ....+.++.. ...+++|++|++++++.+++.+.
T Consensus 143 ~sK~~~E~~~~~y~-----~~~~lr~~~~~~~~~~~~~~fi~--~~~~~~~~~~--~~~s~~yv~D~v~al~~~l~~~~- 212 (298)
T PLN02778 143 KTKAMVEELLKNYE-----NVCTLRVRMPISSDLSNPRNFIT--KITRYEKVVN--IPNSMTILDELLPISIEMAKRNL- 212 (298)
T ss_pred HHHHHHHHHHHHhh-----ccEEeeecccCCcccccHHHHHH--HHHcCCCeeE--cCCCCEEHHHHHHHHHHHHhCCC-
Confidence 77887877766543 46788988878765322222222 3333433211 11379999999999999997654
Q ss_pred CceEEeeCCCCCCHHHHHHHHHHHhCCC---CCCCccHHHHHHHhCccceeeccCcccChhHHHHc-CCCcccccHHHHH
Q 020476 245 RGVINGTAPNPVRLAEMCDHLGNVLGRP---SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL-GFPFKYRYVKDAL 320 (325)
Q Consensus 245 ~~~~~~~~~~~~s~~e~~~~i~~~~g~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l-g~~p~~~~~~~~l 320 (325)
.|+||+++++++|+.|+++.+++.+|.+ ..+.+++.......+. ....+|++|++.+ +=.++ ..++++
T Consensus 213 ~g~yNigs~~~iS~~el~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~------~~~~Ld~~k~~~~~~~~~~--~~~~~~ 284 (298)
T PLN02778 213 TGIYNFTNPGVVSHNEILEMYRDYIDPSFTWKNFTLEEQAKVIVAPR------SNNELDTTKLKREFPELLP--IKESLI 284 (298)
T ss_pred CCeEEeCCCCcccHHHHHHHHHHHhCCCceeccccHHHHHHHHhCCC------ccccccHHHHHHhcccccc--hHHHHH
Confidence 5899999999999999999999999964 2233442211111111 1126888888764 44344 467777
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
+..+
T Consensus 285 ~~~~ 288 (298)
T PLN02778 285 KYVF 288 (298)
T ss_pred HHHH
Confidence 7654
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.3e-29 Score=228.47 Aligned_cols=245 Identities=18% Similarity=0.168 Sum_probs=176.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC---CeEEEEecCCCcccccCC-------C-------------C-----CccccCc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFP-------G-------------K-----KTRFFPG 71 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~-------~-------------~-----~~~~~~~ 71 (325)
.++|+|||||||||++|+++|++.+ .+|+++.|.......... . . .......
T Consensus 11 ~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~ 90 (491)
T PLN02996 11 NKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVP 90 (491)
T ss_pred CCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEe
Confidence 3689999999999999999999764 378999997653211100 0 0 0111234
Q ss_pred eeec-------CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeee
Q 020476 72 VMIA-------EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 144 (325)
Q Consensus 72 ~d~~-------d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~ 144 (325)
+|+. +.+.+.++++++|+|||+|+... + ..++...+++|+.++.+++++|++. .+++++||+||..+
T Consensus 91 GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~---~-~~~~~~~~~~Nv~gt~~ll~~a~~~-~~~k~~V~vST~~v- 164 (491)
T PLN02996 91 GDISYDDLGVKDSNLREEMWKEIDIVVNLAATTN---F-DERYDVALGINTLGALNVLNFAKKC-VKVKMLLHVSTAYV- 164 (491)
T ss_pred cccCCcCCCCChHHHHHHHHhCCCEEEECccccC---C-cCCHHHHHHHHHHHHHHHHHHHHhc-CCCCeEEEEeeeEE-
Confidence 5665 33446677889999999999652 2 2356778899999999999999873 36789999999999
Q ss_pred eecCCCCc----eecCC-------------------------------------------------CCCCCch-HHHHHH
Q 020476 145 YYGTSETE----VFDES-------------------------------------------------SPSGNDY-LAEVCR 170 (325)
Q Consensus 145 ~~g~~~~~----~~~e~-------------------------------------------------~~~~~~y-~~k~~~ 170 (325)
||...+. ++.+. ....+.| .+|...
T Consensus 165 -yG~~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~a 243 (491)
T PLN02996 165 -CGEKSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMG 243 (491)
T ss_pred -ecCCCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHH
Confidence 8764321 11100 0012347 788888
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--------HHHcCCC---CCCCcceeeeccHHHHHHHHHHHH
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--------MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--------~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
|.....+. .+++++++||++|+|+...+...|+..+ ....|.. ++++++.+|++||+|++++++.++
T Consensus 244 E~lv~~~~--~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~ 321 (491)
T PLN02996 244 EMLLGNFK--ENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAM 321 (491)
T ss_pred HHHHHHhc--CCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHH
Confidence 87776553 4899999999999999765554443221 1233333 378999999999999999999998
Q ss_pred cCC----CCCceEEeeCC--CCCCHHHHHHHHHHHhCCCC
Q 020476 240 SNP----SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPS 273 (325)
Q Consensus 240 ~~~----~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~ 273 (325)
.+. ....+||++++ +++|+.|+++.+.+.++..+
T Consensus 322 ~~~~~~~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p 361 (491)
T PLN02996 322 AAHAGGQGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNP 361 (491)
T ss_pred HHhhccCCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCC
Confidence 753 13459999998 89999999999999988643
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.5e-28 Score=230.62 Aligned_cols=248 Identities=22% Similarity=0.246 Sum_probs=172.6
Q ss_pred CeEEEECCCchHHHHHHHHHH--hCCCeEEEEecCCCccc--ccCCC-C-CccccCceeecCC------chhHhhhCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQ--ADNHQVRVLTRSRSKAE--LIFPG-K-KTRFFPGVMIAEE------PQWRDCIQGST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~--~~g~~V~~~~r~~~~~~--~~~~~-~-~~~~~~~~d~~d~------~~~~~~~~~~d 88 (325)
|||||||||||||++|+++|+ +.|++|++++|+..... ..... . .......+|+.|+ +.+.++ +++|
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D 79 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSLSRLEALAAYWGADRVVPLVGDLTEPGLGLSEADIAEL-GDID 79 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchHHHHHHHHHhcCCCcEEEEecccCCccCCcCHHHHHHh-cCCC
Confidence 689999999999999999999 57899999999653321 00000 0 0011335677764 344454 8999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC-----CCCc
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP-----SGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~-----~~~~ 163 (325)
+|||||+.... ........++|+.++.+++++|++ .+++++||+||..+ ||...+ +.+|+.. +...
T Consensus 80 ~Vih~Aa~~~~----~~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~~SS~~v--~g~~~~-~~~e~~~~~~~~~~~~ 150 (657)
T PRK07201 80 HVVHLAAIYDL----TADEEAQRAANVDGTRNVVELAER--LQAATFHHVSSIAV--AGDYEG-VFREDDFDEGQGLPTP 150 (657)
T ss_pred EEEECceeecC----CCCHHHHHHHHhHHHHHHHHHHHh--cCCCeEEEEecccc--ccCccC-ccccccchhhcCCCCc
Confidence 99999996422 123456788999999999999999 67899999999998 875433 3344332 2345
Q ss_pred h-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc----c---chHHHHHHHcCC----CC-CCCcceeeeccHHH
Q 020476 164 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----A---KMIPLFMMFAGG----PL-GSGQQWFSWIHLDD 230 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~----~---~~~~~~~~~~~~----~~-~~~~~~~~~v~v~D 230 (325)
| .+|...|.... . ..+++++++||+.|||+..... . .+...+...... +. +.+...++++|++|
T Consensus 151 Y~~sK~~~E~~~~--~-~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vdd 227 (657)
T PRK07201 151 YHRTKFEAEKLVR--E-ECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDY 227 (657)
T ss_pred hHHHHHHHHHHHH--H-cCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHH
Confidence 6 66665555443 2 3589999999999999853211 0 111222111111 11 34456789999999
Q ss_pred HHHHHHHHHcCCCC-CceEEeeCCCCCCHHHHHHHHHHHhCCCC----CCCccHHH
Q 020476 231 IVNLIYEALSNPSY-RGVINGTAPNPVRLAEMCDHLGNVLGRPS----WLPVPEFA 281 (325)
Q Consensus 231 ~a~a~~~~~~~~~~-~~~~~~~~~~~~s~~e~~~~i~~~~g~~~----~~~~~~~~ 281 (325)
+++++..++..+.. +++||+++++++|+.|+++.+.+.+|.+. ...+|...
T Consensus 228 va~ai~~~~~~~~~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~~~~~~~~~p~~~ 283 (657)
T PRK07201 228 VADALDHLMHKDGRDGQTFHLTDPKPQRVGDIYNAFARAAGAPPDARLFGFLPGFV 283 (657)
T ss_pred HHHHHHHHhcCcCCCCCEEEeCCCCCCcHHHHHHHHHHHhCCCccccccccCChHH
Confidence 99999999886553 45999999999999999999999999875 23455543
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.6e-29 Score=199.59 Aligned_cols=302 Identities=16% Similarity=0.108 Sum_probs=222.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCc----cccCceeecCCchhHhhhC--CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKT----RFFPGVMIAEEPQWRDCIQ--GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~----~~~~~~d~~d~~~~~~~~~--~~d 88 (325)
++++.||||-||+-|++|++.|++.|++|.++.|+.+..... ...... .....+|+.|...+.++++ ++|
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~l~~gDLtD~~~l~r~l~~v~Pd 80 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLHLHYGDLTDSSNLLRILEEVQPD 80 (345)
T ss_pred CCceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccccccCCceeEEEeccccchHHHHHHHHhcCch
Confidence 356899999999999999999999999999999975442221 111110 1134578889999988886 799
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC--CCCch-H
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-L 165 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~--~~~~y-~ 165 (325)
-|+|+|+.. .+..+.+.+....+++..|+.+|+++.+..+....||...||+.. ||.....|.+|.+| |.++| .
T Consensus 81 EIYNLaAQS-~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~--fG~v~~~pq~E~TPFyPrSPYAv 157 (345)
T COG1089 81 EIYNLAAQS-HVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAV 157 (345)
T ss_pred hheeccccc-cccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHh--hcCcccCccccCCCCCCCCHHHH
Confidence 999999975 445556667778888999999999999986432468999999998 99999999999999 46688 8
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC--Ccc-cchHHHH-HHHcCCC----CCCCcceeeeccHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDG--GAL-AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~--~~~-~~~~~~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+|..+-+....|.+.+|+-.|.=.+.+--+|.. .+. +++.... +...|.. +|+-+.+|||-|..|.++++..
T Consensus 158 AKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwl 237 (345)
T COG1089 158 AKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWL 237 (345)
T ss_pred HHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHH
Confidence 899999999999999998877544444444432 222 2222222 3333332 4899999999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC---CccHHHHHHHhCc---------cceeeccCcccChhHHH
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL---PVPEFALKAVLGE---------GAFVVLEGQRVVPARAK 305 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~---~~~~~~~~~~~~~---------~~~~~~~~~~~~~~k~~ 305 (325)
.+++++ ...|+++.|+..|++||+++..+..|.+..+ .+.+...++..|+ ..+...+-...|++|++
T Consensus 238 mLQq~~-PddyViATg~t~sVrefv~~Af~~~g~~l~w~g~g~~e~g~da~~G~~~V~idp~~fRPaEV~~Llgdp~KA~ 316 (345)
T COG1089 238 MLQQEE-PDDYVIATGETHSVREFVELAFEMVGIDLEWEGTGVDEKGVDAKTGKIIVEIDPRYFRPAEVDLLLGDPTKAK 316 (345)
T ss_pred HHccCC-CCceEEecCceeeHHHHHHHHHHHcCceEEEeeccccccccccccCceeEEECccccCchhhhhhcCCHHHHH
Confidence 999986 6799999999999999999999999965211 1111111111111 11223333455678886
Q ss_pred -HcCCCcccccHHHHHHHHhC
Q 020476 306 -ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 306 -~lg~~p~~~~~~~~l~~~~~ 325 (325)
+|||+|++ +++|.+++|++
T Consensus 317 ~~LGW~~~~-~~~elv~~Mv~ 336 (345)
T COG1089 317 EKLGWRPEV-SLEELVREMVE 336 (345)
T ss_pred HHcCCcccc-CHHHHHHHHHH
Confidence 69999999 59999998874
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.3e-28 Score=215.71 Aligned_cols=235 Identities=22% Similarity=0.250 Sum_probs=172.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc------cCCCCCccccCceeecCCchhHhhhC----CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL------IFPGKKTRFFPGVMIAEEPQWRDCIQ----GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d 88 (325)
.+|+|+|||||||||++++++|+++|++|++++|+..+... .........+..+|+.|++.+.++++ ++|
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~~~D 138 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEGDPVD 138 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhCCCCc
Confidence 45799999999999999999999999999999998754221 00000111245689999999999887 599
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
+||||++..... ....+++|+.++.++++++++ .+++++|++||.++ ++ +...| .+|
T Consensus 139 ~Vi~~aa~~~~~------~~~~~~vn~~~~~~ll~aa~~--~gv~r~V~iSS~~v--~~------------p~~~~~~sK 196 (390)
T PLN02657 139 VVVSCLASRTGG------VKDSWKIDYQATKNSLDAGRE--VGAKHFVLLSAICV--QK------------PLLEFQRAK 196 (390)
T ss_pred EEEECCccCCCC------CccchhhHHHHHHHHHHHHHH--cCCCEEEEEeeccc--cC------------cchHHHHHH
Confidence 999998743111 124467899999999999998 78899999999876 43 12234 556
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC---CCCccee-eeccHHHHHHHHHHHHcCCC
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL---GSGQQWF-SWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~v~v~D~a~a~~~~~~~~~ 243 (325)
...|.+... ...+++++|+||+.+||+.. ..+. ....+.++ +++...+ +++|++|+|++++.++.++.
T Consensus 197 ~~~E~~l~~--~~~gl~~tIlRp~~~~~~~~----~~~~--~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~ 268 (390)
T PLN02657 197 LKFEAELQA--LDSDFTYSIVRPTAFFKSLG----GQVE--IVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES 268 (390)
T ss_pred HHHHHHHHh--ccCCCCEEEEccHHHhcccH----HHHH--hhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc
Confidence 555544432 34689999999999997531 1111 22345553 6666544 57999999999999997654
Q ss_pred -CCceEEeeCC-CCCCHHHHHHHHHHHhCCCC-CCCccHHHHH
Q 020476 244 -YRGVINGTAP-NPVRLAEMCDHLGNVLGRPS-WLPVPEFALK 283 (325)
Q Consensus 244 -~~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~ 283 (325)
.+++||++++ +.+|++|+++++.+.+|++. ...+|.+...
T Consensus 269 ~~~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~~~vp~~~~~ 311 (390)
T PLN02657 269 KINKVLPIGGPGKALTPLEQGEMLFRILGKEPKFFKVPIQIMD 311 (390)
T ss_pred ccCCEEEcCCCCcccCHHHHHHHHHHHhCCCCceEEcCHHHHH
Confidence 4569999986 68999999999999999874 3466666554
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.4e-27 Score=207.62 Aligned_cols=251 Identities=20% Similarity=0.242 Sum_probs=173.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCccc---ccC---------CCC---CccccCceeecCC------c
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE---LIF---------PGK---KTRFFPGVMIAEE------P 78 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~---~~~---------~~~---~~~~~~~~d~~d~------~ 78 (325)
+|+|||||||||++++++|+++| .+|++++|+.+... .+. ... .......+|+.++ +
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~gl~~~ 80 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIEVVAGDLSEPRLGLSDA 80 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEEEEeCCcCcccCCcCHH
Confidence 58999999999999999999998 67999999876321 100 000 0011234565543 3
Q ss_pred hhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 79 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
.+.++.+++|+|||+|+.... ........+.|+.++.+++++|.+ .+.++++|+||.++ |+.....+..|+.
T Consensus 81 ~~~~~~~~~d~vih~a~~~~~----~~~~~~~~~~nv~g~~~ll~~a~~--~~~~~~v~iSS~~v--~~~~~~~~~~~~~ 152 (367)
T TIGR01746 81 EWERLAENVDTIVHNGALVNW----VYPYSELRAANVLGTREVLRLAAS--GRAKPLHYVSTISV--LAAIDLSTVTEDD 152 (367)
T ss_pred HHHHHHhhCCEEEeCCcEecc----CCcHHHHhhhhhHHHHHHHHHHhh--CCCceEEEEccccc--cCCcCCCCccccc
Confidence 566667899999999986421 123567788999999999999998 67788999999998 7654333223332
Q ss_pred C-------CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC-Cc--ccchHH-HHH-HHcCCCCCCCc-ceee
Q 020476 159 P-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG-GA--LAKMIP-LFM-MFAGGPLGSGQ-QWFS 224 (325)
Q Consensus 159 ~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~-~~--~~~~~~-~~~-~~~~~~~~~~~-~~~~ 224 (325)
+ ....| .+|...|......... |++++++||+.++|+.. +. ...++. .+. ....+.+.... ...+
T Consensus 153 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~-g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 231 (367)
T TIGR01746 153 AIVTPPPGLAGGYAQSKWVAELLVREASDR-GLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTED 231 (367)
T ss_pred cccccccccCCChHHHHHHHHHHHHHHHhc-CCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccC
Confidence 2 12357 6787777666555443 89999999999999732 11 112221 221 11222233333 3578
Q ss_pred eccHHHHHHHHHHHHcCCCC---CceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHHH
Q 020476 225 WIHLDDIVNLIYEALSNPSY---RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFAL 282 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~~---~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~ 282 (325)
+++++|++++++.++..+.. +++||+++++++++.|+++.+.+ +|.+ ..++.++|..
T Consensus 232 ~~~vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~~~~~~~~w~~ 292 (367)
T TIGR01746 232 LTPVDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNLKLVSFDEWLQ 292 (367)
T ss_pred cccHHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCCCcCCHHHHHH
Confidence 99999999999999987653 56999999999999999999999 8876 3445555543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.1e-26 Score=197.07 Aligned_cols=256 Identities=20% Similarity=0.184 Sum_probs=172.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh------CC-CCEEEECC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QG-STAVVNLA 94 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~------~~-~d~vi~~a 94 (325)
+|+||||||++|++++++|+++|++|++++|++++.... .. ....+|+.|++.+.+++ ++ +|.|+|++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~~--~~---~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~ 75 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAGP--NE---KHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVA 75 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccCC--CC---ccccccCCCHHHHHHHHhcccCcCCceeEEEEeC
Confidence 589999999999999999999999999999998754321 11 13457999999999988 57 99999998
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEG 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~ 174 (325)
+... . ......+++++|++ .+++++|++||..+ +... . .+...+
T Consensus 76 ~~~~------~--------~~~~~~~~i~aa~~--~gv~~~V~~Ss~~~--~~~~------------~---~~~~~~--- 119 (285)
T TIGR03649 76 PPIP------D--------LAPPMIKFIDFARS--KGVRRFVLLSASII--EKGG------------P---AMGQVH--- 119 (285)
T ss_pred CCCC------C--------hhHHHHHHHHHHHH--cCCCEEEEeecccc--CCCC------------c---hHHHHH---
Confidence 6321 0 02345688999999 79999999998765 2110 0 000011
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC--CCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEee
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGT 251 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~ 251 (325)
.......+++++++||++++++..... ... .......+ +.++..+++++++|+|+++..++.++. .+++|++.
T Consensus 120 ~~l~~~~gi~~tilRp~~f~~~~~~~~--~~~--~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~~~~~~~~l~ 195 (285)
T TIGR03649 120 AHLDSLGGVEYTVLRPTWFMENFSEEF--HVE--AIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKVAPNTDYVVL 195 (285)
T ss_pred HHHHhccCCCEEEEeccHHhhhhcccc--ccc--ccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCCcCCCeEEee
Confidence 111122489999999999886531110 011 11122222 456778899999999999999998865 45689999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCC-CCCccHHHHHHHh---Cccce-------e----eccCcccChhHH-HHcCCCccccc
Q 020476 252 APNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVL---GEGAF-------V----VLEGQRVVPARA-KELGFPFKYRY 315 (325)
Q Consensus 252 ~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~---~~~~~-------~----~~~~~~~~~~k~-~~lg~~p~~~~ 315 (325)
+++.+|+.|+++.+.+.+|++. ...++........ +.... . ........+... +.+|.+|+ +
T Consensus 196 g~~~~s~~eia~~l~~~~g~~v~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~ 273 (285)
T TIGR03649 196 GPELLTYDDVAEILSRVLGRKITHVKLTEEELAQRLQSFGMPEDLARMLASLDTAVKNGAEVRLNDVVKAVTGSKPR--G 273 (285)
T ss_pred CCccCCHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCccccccchHHHHhCcCCc--c
Confidence 9999999999999999999873 3344444332211 11100 0 000001112223 45899999 8
Q ss_pred HHHHHHHHh
Q 020476 316 VKDALKAIM 324 (325)
Q Consensus 316 ~~~~l~~~~ 324 (325)
+++.+++..
T Consensus 274 ~~~~~~~~~ 282 (285)
T TIGR03649 274 FRDFAESNK 282 (285)
T ss_pred HHHHHHHhh
Confidence 999998753
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=217.30 Aligned_cols=264 Identities=16% Similarity=0.152 Sum_probs=181.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
..||||||||+||||++|++.|.++|++|.... .|+.|.+.+.+.++ ++|+|||||+.
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~~--------------------~~l~d~~~v~~~i~~~~pd~Vih~Aa~ 438 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYGK--------------------GRLEDRSSLLADIRNVKPTHVFNAAGV 438 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHHhCCCeEEeec--------------------cccccHHHHHHHHHhhCCCEEEECCcc
Confidence 457999999999999999999999999883111 24556777777665 79999999997
Q ss_pred CCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC------CCceecCCCCCC---Cch-
Q 020476 97 PIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS------ETEVFDESSPSG---NDY- 164 (325)
Q Consensus 97 ~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~------~~~~~~e~~~~~---~~y- 164 (325)
... .++++.++...+++|+.++.+++++|++ .+++ ++++||.++ |+.. .+.+++|++++. +.|
T Consensus 439 ~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~--~g~~-~v~~Ss~~v--~~~~~~~~~~~~~p~~E~~~~~~~~~~Yg 513 (668)
T PLN02260 439 TGRPNVDWCESHKVETIRANVVGTLTLADVCRE--NGLL-MMNFATGCI--FEYDAKHPEGSGIGFKEEDKPNFTGSFYS 513 (668)
T ss_pred cCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHH--cCCe-EEEEcccce--ecCCcccccccCCCCCcCCCCCCCCChhh
Confidence 532 3455667889999999999999999999 6764 678888888 6531 134677776543 457
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
.+|...|.....+ .++.++|+.++|+.+......++..+... ..++.- ..+..+++|++.+++.+++.+ .
T Consensus 514 ~sK~~~E~~~~~~-----~~~~~~r~~~~~~~~~~~~~nfv~~~~~~-~~~~~v---p~~~~~~~~~~~~~~~l~~~~-~ 583 (668)
T PLN02260 514 KTKAMVEELLREY-----DNVCTLRVRMPISSDLSNPRNFITKISRY-NKVVNI---PNSMTVLDELLPISIEMAKRN-L 583 (668)
T ss_pred HHHHHHHHHHHhh-----hhheEEEEEEecccCCCCccHHHHHHhcc-ceeecc---CCCceehhhHHHHHHHHHHhC-C
Confidence 7787777666544 25788899999975422222333333211 112211 134677888998888888753 3
Q ss_pred CceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHH
Q 020476 245 RGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA 322 (325)
Q Consensus 245 ~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~ 322 (325)
+|+||++++..+|+.|+++.+.+.++.. ...+++...... ....+ .... .++++|+++ +|+ +. +|+|+|.+
T Consensus 584 ~giyni~~~~~~s~~e~a~~i~~~~~~~~~~~~~~~~~~~~--~~~a~-rp~~-~l~~~k~~~~~~~-~~--~~~~~l~~ 656 (668)
T PLN02260 584 RGIWNFTNPGVVSHNEILEMYKDYIDPGFKWSNFTLEEQAK--VIVAP-RSNN-EMDASKLKKEFPE-LL--SIKESLIK 656 (668)
T ss_pred CceEEecCCCcCcHHHHHHHHHHhcCCcccccccCHHHhhh--HhhCC-Cccc-cccHHHHHHhCcc-cc--chHHHHHH
Confidence 6899999999999999999999988521 122333332221 01111 1222 688888876 788 65 79999998
Q ss_pred Hh
Q 020476 323 IM 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 657 ~~ 658 (668)
T PLN02260 657 YV 658 (668)
T ss_pred HH
Confidence 76
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.3e-27 Score=196.06 Aligned_cols=229 Identities=21% Similarity=0.248 Sum_probs=171.4
Q ss_pred EEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCC-------Ccc---ccCceeecCCchhHhhhC--CCCE
Q 020476 23 VSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-------KTR---FFPGVMIAEEPQWRDCIQ--GSTA 89 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-------~~~---~~~~~d~~d~~~~~~~~~--~~d~ 89 (325)
||||||+|.||+.|+++|++.+ .++++++|++.+...+.... ... ...-+|+.|.+.+..+++ ++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 7999999999999999999987 58999999876643322111 000 012468889999999998 8999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
|||+|++. .+...+.++.+..++|+.||.|++++|.+ .+++++|++||.-+. .|.+-| .+|+
T Consensus 81 VfHaAA~K-hVpl~E~~p~eav~tNv~GT~nv~~aa~~--~~v~~~v~ISTDKAv--------------~PtnvmGatKr 143 (293)
T PF02719_consen 81 VFHAAALK-HVPLMEDNPFEAVKTNVLGTQNVAEAAIE--HGVERFVFISTDKAV--------------NPTNVMGATKR 143 (293)
T ss_dssp EEE-------HHHHCCCHHHHHHHHCHHHHHHHHHHHH--TT-SEEEEEEECGCS--------------S--SHHHHHHH
T ss_pred EEEChhcC-CCChHHhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEccccccC--------------CCCcHHHHHHH
Confidence 99999975 45556778899999999999999999999 799999999998761 134556 8899
Q ss_pred HHHHHHHHHhhcC---CceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC--CCCcceeeeccHHHHHHHHHHHHcC
Q 020476 169 CREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 169 ~~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
..|.....+.... +.+++++|.|+|+|..++ +++.+ +...|+|+ .+++..|=|+.++++++.++.+...
T Consensus 144 laE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GS----Vip~F~~Qi~~g~PlTvT~p~mtRffmti~EAv~Lvl~a~~~ 219 (293)
T PF02719_consen 144 LAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGS----VIPLFKKQIKNGGPLTVTDPDMTRFFMTIEEAVQLVLQAAAL 219 (293)
T ss_dssp HHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTS----CHHHHHHHHHTTSSEEECETT-EEEEE-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhCCCCCcEEEEEEecceecCCCc----HHHHHHHHHHcCCcceeCCCCcEEEEecHHHHHHHHHHHHhh
Confidence 9999888888765 689999999999998764 45555 56678886 7889999999999999999999988
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCC
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
...+++|.+--|++++..|+++.+.+..|..
T Consensus 220 ~~~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 220 AKGGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp --TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred CCCCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 7767799888889999999999999999853
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.5e-25 Score=193.76 Aligned_cols=231 Identities=22% Similarity=0.251 Sum_probs=193.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCC------CccccCceeecCCchhHhhhCC--CCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK------KTRFFPGVMIAEEPQWRDCIQG--STAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~------~~~~~~~~d~~d~~~~~~~~~~--~d~v 90 (325)
.++||||||+|-||+.+++++++.+ .+++.++|++.+........ ......-+|+.|.+.+.+++++ +|+|
T Consensus 250 gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD~~~~~~~~~~~kvd~V 329 (588)
T COG1086 250 GKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRDRDRVERAMEGHKVDIV 329 (588)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEecccccHHHHHHHHhcCCCceE
Confidence 4799999999999999999999987 58999999887643322111 1111234789999999999987 9999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC 169 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~ 169 (325)
||+|++. .+...+.++.+.+.+|+.||.|++++|.+ .+++++|++||.-+. .|.+-| .+|+.
T Consensus 330 fHAAA~K-HVPl~E~nP~Eai~tNV~GT~nv~~aa~~--~~V~~~V~iSTDKAV--------------~PtNvmGaTKr~ 392 (588)
T COG1086 330 FHAAALK-HVPLVEYNPEEAIKTNVLGTENVAEAAIK--NGVKKFVLISTDKAV--------------NPTNVMGATKRL 392 (588)
T ss_pred EEhhhhc-cCcchhcCHHHHHHHhhHhHHHHHHHHHH--hCCCEEEEEecCccc--------------CCchHhhHHHHH
Confidence 9999975 57778999999999999999999999999 899999999998762 134456 88999
Q ss_pred HHHHHHHHhhcC---CceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC--CCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 170 REWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 170 ~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
.|.....+.... +.+++.+|.|+|.|..++ ++|.+ +..+|+|+ .+++..|=|+.+.|+++.++.+....
T Consensus 393 aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGS----ViPlFk~QI~~GgplTvTdp~mtRyfMTI~EAv~LVlqA~a~~ 468 (588)
T COG1086 393 AEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGS----VIPLFKKQIAEGGPLTVTDPDMTRFFMTIPEAVQLVLQAGAIA 468 (588)
T ss_pred HHHHHHHHhhccCCCCcEEEEEEecceecCCCC----CHHHHHHHHHcCCCccccCCCceeEEEEHHHHHHHHHHHHhhc
Confidence 999888887633 489999999999999764 56666 56778886 79999999999999999999999887
Q ss_pred CCCceEEeeCCCCCCHHHHHHHHHHHhCC
Q 020476 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGR 271 (325)
Q Consensus 243 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~ 271 (325)
..+++|-+--|++++..|+++.+-+.+|.
T Consensus 469 ~gGeifvldMGepvkI~dLAk~mi~l~g~ 497 (588)
T COG1086 469 KGGEIFVLDMGEPVKIIDLAKAMIELAGQ 497 (588)
T ss_pred CCCcEEEEcCCCCeEHHHHHHHHHHHhCC
Confidence 76669999999999999999999999984
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.6e-25 Score=202.19 Aligned_cols=201 Identities=22% Similarity=0.258 Sum_probs=143.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
||||||||+||||++|++.|+++|++|++++|.+.... .... .+...|+.++. +.++++++|+|||+|+...
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~--~~~v---e~v~~Dl~d~~-l~~al~~~D~VIHLAa~~~-- 72 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL--DPRV---DYVCASLRNPV-LQELAGEADAVIHLAPVDT-- 72 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc--cCCc---eEEEccCCCHH-HHHHhcCCCEEEEcCccCc--
Confidence 58999999999999999999999999999998754321 1111 14557887774 7777889999999998531
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHHHhhc
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN 180 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~~ 180 (325)
. ....+|+.++.+++++|++ .++ ++||+||. +|... .|. ..|... ..
T Consensus 73 ---~----~~~~vNv~Gt~nLleAA~~--~Gv-RiV~~SS~----~G~~~------------~~~---~aE~ll----~~ 119 (699)
T PRK12320 73 ---S----APGGVGITGLAHVANAAAR--AGA-RLLFVSQA----AGRPE------------LYR---QAETLV----ST 119 (699)
T ss_pred ---c----chhhHHHHHHHHHHHHHHH--cCC-eEEEEECC----CCCCc------------ccc---HHHHHH----Hh
Confidence 1 1124799999999999998 665 79999975 33211 111 122211 22
Q ss_pred CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHH
Q 020476 181 KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259 (325)
Q Consensus 181 ~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (325)
.+++++++|++++||++.... .+++..+.. ... ....+.++|++|++++++.+++.+. .|+||+++++.+|+.
T Consensus 120 ~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~---~~~--~~~pI~vIyVdDvv~alv~al~~~~-~GiyNIG~~~~~Si~ 193 (699)
T PRK12320 120 GWAPSLVIRIAPPVGRQLDWMVCRTVATLLR---SKV--SARPIRVLHLDDLVRFLVLALNTDR-NGVVDLATPDTTNVV 193 (699)
T ss_pred cCCCEEEEeCceecCCCCcccHhHHHHHHHH---HHH--cCCceEEEEHHHHHHHHHHHHhCCC-CCEEEEeCCCeeEHH
Confidence 468999999999999964321 122222211 011 1234557999999999999998753 579999999999999
Q ss_pred HHHHHHHHH
Q 020476 260 EMCDHLGNV 268 (325)
Q Consensus 260 e~~~~i~~~ 268 (325)
|+++.+...
T Consensus 194 el~~~i~~~ 202 (699)
T PRK12320 194 TAWRLLRSV 202 (699)
T ss_pred HHHHHHHHh
Confidence 999999776
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=197.01 Aligned_cols=243 Identities=14% Similarity=0.193 Sum_probs=166.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCccc---cc----CC------------C------CCccccCc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAE---LI----FP------------G------KKTRFFPG 71 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~---~~----~~------------~------~~~~~~~~ 71 (325)
.++|+|||||||||++|+++|++.+. +|+++.|...... ++ .. . ........
T Consensus 119 ~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~ 198 (605)
T PLN02503 119 GKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV 198 (605)
T ss_pred CCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEE
Confidence 46999999999999999999998753 7899999754321 11 00 0 00111234
Q ss_pred eeecCC------chhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeee
Q 020476 72 VMIAEE------PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGY 145 (325)
Q Consensus 72 ~d~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~ 145 (325)
.|+.++ +....+.+++|+|||+|+... + ..+.+...++|+.++.+++++|++. ...+++||+||+.+
T Consensus 199 GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~---f-~~~~~~a~~vNV~GT~nLLelA~~~-~~lk~fV~vSTayV-- 271 (605)
T PLN02503 199 GNVCESNLGLEPDLADEIAKEVDVIINSAANTT---F-DERYDVAIDINTRGPCHLMSFAKKC-KKLKLFLQVSTAYV-- 271 (605)
T ss_pred eeCCCcccCCCHHHHHHHHhcCCEEEECccccc---c-ccCHHHHHHHHHHHHHHHHHHHHHc-CCCCeEEEccCcee--
Confidence 677766 355666678999999999652 2 2356788899999999999999873 35678999999998
Q ss_pred ecCCCCc----eec-----------------------------------C---C------------------CCCCCch-
Q 020476 146 YGTSETE----VFD-----------------------------------E---S------------------SPSGNDY- 164 (325)
Q Consensus 146 ~g~~~~~----~~~-----------------------------------e---~------------------~~~~~~y- 164 (325)
||...+. ++. + . ..-.+.|
T Consensus 272 yG~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt 351 (605)
T PLN02503 272 NGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYV 351 (605)
T ss_pred ecCCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHH
Confidence 8865422 221 0 0 0001345
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchH-------HHH-HHHcCC---CCCCCcceeeeccHHHHHH
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMI-------PLF-MMFAGG---PLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~-------~~~-~~~~~~---~~~~~~~~~~~v~v~D~a~ 233 (325)
.+|..+|.... ....++|++|+||+.|.+....++..|. +.. ....|. .+++++...|+|+||.+++
T Consensus 352 ~TK~lAE~lV~--~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvn 429 (605)
T PLN02503 352 FTKAMGEMVIN--SMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVN 429 (605)
T ss_pred HHHHHHHHHHH--HhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHH
Confidence 66766666655 3335899999999999543222222222 211 111222 1278889999999999999
Q ss_pred HHHHHHcC-C----CCCceEEeeCC--CCCCHHHHHHHHHHHhCC
Q 020476 234 LIYEALSN-P----SYRGVINGTAP--NPVRLAEMCDHLGNVLGR 271 (325)
Q Consensus 234 a~~~~~~~-~----~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~ 271 (325)
+++.++.. . ....+||++++ +|++|.++.+.+.+++.+
T Consensus 430 a~i~a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~ 474 (605)
T PLN02503 430 ATLAAMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKS 474 (605)
T ss_pred HHHHHHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhh
Confidence 99998432 1 13469999988 899999999999988865
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.1e-24 Score=170.86 Aligned_cols=182 Identities=28% Similarity=0.434 Sum_probs=134.7
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRW 102 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~~~ 102 (325)
|+|+||||++|++++++|+++|++|++++|++++... .... ....+|+.|++.+.++++++|+||++++....
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~-~~~~---~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~--- 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED-SPGV---EIIQGDLFDPDSVKAALKGADAVIHAAGPPPK--- 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH-CTTE---EEEESCTTCHHHHHHHHTTSSEEEECCHSTTT---
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc-cccc---ccceeeehhhhhhhhhhhhcchhhhhhhhhcc---
Confidence 7999999999999999999999999999999887655 2211 25568889999999999999999999975311
Q ss_pred ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhcC
Q 020476 103 SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK 181 (325)
Q Consensus 103 ~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~ 181 (325)
....++++++++++ .+++++|++|+.++ |+........+..+....| ..+. +.+... .+.
T Consensus 74 -----------~~~~~~~~~~a~~~--~~~~~~v~~s~~~~--~~~~~~~~~~~~~~~~~~~~~~~~--~~e~~~--~~~ 134 (183)
T PF13460_consen 74 -----------DVDAAKNIIEAAKK--AGVKRVVYLSSAGV--YRDPPGLFSDEDKPIFPEYARDKR--EAEEAL--RES 134 (183)
T ss_dssp -----------HHHHHHHHHHHHHH--TTSSEEEEEEETTG--TTTCTSEEEGGTCGGGHHHHHHHH--HHHHHH--HHS
T ss_pred -----------cccccccccccccc--cccccceeeecccc--CCCCCcccccccccchhhhHHHHH--HHHHHH--Hhc
Confidence 16778899999999 78999999999998 7755554333333333334 3332 223222 235
Q ss_pred CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 182 DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 182 ~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
+++|+++||+.+||+..... .+.. ..+....++|+.+|+|++++.++++
T Consensus 135 ~~~~~ivrp~~~~~~~~~~~-~~~~----------~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 135 GLNWTIVRPGWIYGNPSRSY-RLIK----------EGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp TSEEEEEEESEEEBTTSSSE-EEES----------STSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred CCCEEEEECcEeEeCCCcce-eEEe----------ccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 99999999999999974322 1110 0334456899999999999999864
|
... |
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=1e-23 Score=176.94 Aligned_cols=229 Identities=19% Similarity=0.198 Sum_probs=148.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhh-CCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-QGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~-~~~d~vi~~a~~ 96 (325)
.+|+|+||||||+||++++++|+++|++|+++.|++++............+..+|+.|. +.+.+.+ .++|+||++++.
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g~ 95 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF 95 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCCC
Confidence 46799999999999999999999999999999998765332221111112445788773 5676777 689999999885
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTA 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~ 176 (325)
... .. ....+++|..++.++++++++ .+++++|++||.++ ||...+.+..+.......|..........+.
T Consensus 96 ~~~--~~---~~~~~~~n~~~~~~ll~a~~~--~~~~~iV~iSS~~v--~g~~~~~~~~~~~~~~~~~~~~~~~k~~~e~ 166 (251)
T PLN00141 96 RRS--FD---PFAPWKVDNFGTVNLVEACRK--AGVTRFILVSSILV--NGAAMGQILNPAYIFLNLFGLTLVAKLQAEK 166 (251)
T ss_pred CcC--CC---CCCceeeehHHHHHHHHHHHH--cCCCEEEEEccccc--cCCCcccccCcchhHHHHHHHHHHHHHHHHH
Confidence 311 11 112346788899999999998 78899999999988 8754332222111111112000001112222
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCC--
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAP-- 253 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~-- 253 (325)
+....+++++++||+++++...... .. .. ........+++.+|+|+++..++..+.. ..++.+.+.
T Consensus 167 ~l~~~gi~~~iirpg~~~~~~~~~~--~~----~~-----~~~~~~~~~i~~~dvA~~~~~~~~~~~~~~~~~~~~~~~~ 235 (251)
T PLN00141 167 YIRKSGINYTIVRPGGLTNDPPTGN--IV----ME-----PEDTLYEGSISRDQVAEVAVEALLCPESSYKVVEIVARAD 235 (251)
T ss_pred HHHhcCCcEEEEECCCccCCCCCce--EE----EC-----CCCccccCcccHHHHHHHHHHHhcChhhcCcEEEEecCCC
Confidence 2234689999999999997642110 00 00 0111123579999999999999988774 457888763
Q ss_pred C-CCCHHHHHHHHHH
Q 020476 254 N-PVRLAEMCDHLGN 267 (325)
Q Consensus 254 ~-~~s~~e~~~~i~~ 267 (325)
. ..++.++...+++
T Consensus 236 ~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 236 APKRSYKDLFASIKQ 250 (251)
T ss_pred CCchhHHHHHHHhhc
Confidence 2 3788888887764
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.8e-24 Score=181.12 Aligned_cols=203 Identities=17% Similarity=0.244 Sum_probs=115.1
Q ss_pred EECCCchHHHHHHHHHHhCCC--eEEEEecCCCcc---cccCCC--------------CCccccCceeecC------Cch
Q 020476 25 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKA---ELIFPG--------------KKTRFFPGVMIAE------EPQ 79 (325)
Q Consensus 25 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~---~~~~~~--------------~~~~~~~~~d~~d------~~~ 79 (325)
|||||||+|++|+++|++++. +|+++.|..+.. .++... ........+|+.+ .+.
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~~v~GDl~~~~lGL~~~~ 80 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIEVVEGDLSQPNLGLSDED 80 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEEEEE--TTSGGGG--HHH
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEEEEeccccccccCCChHH
Confidence 799999999999999999876 999999987541 111000 0111123456654 346
Q ss_pred hHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCce------
Q 020476 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV------ 153 (325)
Q Consensus 80 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~------ 153 (325)
+.++.+++|+|||||+.... . .+..+++++|+.+++++++.|.+ ...++++|+||+.+ .+...+..
T Consensus 81 ~~~L~~~v~~IiH~Aa~v~~---~-~~~~~~~~~NV~gt~~ll~la~~--~~~~~~~~iSTa~v--~~~~~~~~~~~~~~ 152 (249)
T PF07993_consen 81 YQELAEEVDVIIHCAASVNF---N-APYSELRAVNVDGTRNLLRLAAQ--GKRKRFHYISTAYV--AGSRPGTIEEKVYP 152 (249)
T ss_dssp HHHHHHH--EEEE--SS-SB---S--S--EEHHHHHHHHHHHHHHHTS--SS---EEEEEEGGG--TTS-TTT--SSS-H
T ss_pred hhccccccceeeecchhhhh---c-ccchhhhhhHHHHHHHHHHHHHh--ccCcceEEeccccc--cCCCCCcccccccc
Confidence 77777899999999997522 2 24556888999999999999997 56669999999555 44333211
Q ss_pred -----ecCCCCCCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCC-CCcc--cc-hHHHH--HHHcCC-C--CCC
Q 020476 154 -----FDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKD-GGAL--AK-MIPLF--MMFAGG-P--LGS 218 (325)
Q Consensus 154 -----~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~-~~~~--~~-~~~~~--~~~~~~-~--~~~ 218 (325)
..........| .+|+..|........+.|++++|+||+.|+|.. .+.. .. +...+ ....+. | .++
T Consensus 153 ~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 232 (249)
T PF07993_consen 153 EEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWNSDDFFPYLLRSCIALGAFPDLPGD 232 (249)
T ss_dssp HH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---TTBHHHHHHHHHHHH-EEES-SB-
T ss_pred cccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceeeccchHHHHHHHHHHcCCcccccCC
Confidence 11111223468 899999988888877779999999999999942 2111 12 22222 112222 1 144
Q ss_pred CcceeeeccHHHHHHHH
Q 020476 219 GQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 219 ~~~~~~~v~v~D~a~a~ 235 (325)
.....++++||.+|++|
T Consensus 233 ~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 233 PDARLDLVPVDYVARAI 249 (249)
T ss_dssp --TT--EEEHHHHHHHH
T ss_pred CCceEeEECHHHHHhhC
Confidence 45569999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-23 Score=166.52 Aligned_cols=238 Identities=21% Similarity=0.284 Sum_probs=179.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cccCCC--CCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~--~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
..-|+|||||+|++++.+|.+.|-+|++-.|..+.. .++... ..+..+...|+.|+++++++++...+|||+.|..
T Consensus 63 VaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGrd- 141 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGRD- 141 (391)
T ss_pred EEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCCCCHHHHHHHHHhCcEEEEeeccc-
Confidence 477999999999999999999999999999976543 333222 2233456788899999999999999999999853
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~ 177 (325)
+... .-.++++|+.++..|+..|++ .++.|+|++|+.++.+ ...+.| .+|...|....
T Consensus 142 ---~eTk-nf~f~Dvn~~~aerlAricke--~GVerfIhvS~Lganv-------------~s~Sr~LrsK~~gE~aVr-- 200 (391)
T KOG2865|consen 142 ---YETK-NFSFEDVNVHIAERLARICKE--AGVERFIHVSCLGANV-------------KSPSRMLRSKAAGEEAVR-- 200 (391)
T ss_pred ---cccC-CcccccccchHHHHHHHHHHh--hChhheeehhhccccc-------------cChHHHHHhhhhhHHHHH--
Confidence 2222 235677999999999999999 8999999999877521 112334 55554443332
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCC-cceeeeccHHHHHHHHHHHHcCCCCCc-eEEeeCCC
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSG-QQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTAPN 254 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~v~v~D~a~a~~~~~~~~~~~~-~~~~~~~~ 254 (325)
. .-...+|+||+.|||..+..++.+...++...-.|+ ..| ...-.++++-|+|++++.++.+|...| +|.+++++
T Consensus 201 d--afPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~s~Gktye~vGP~ 278 (391)
T KOG2865|consen 201 D--AFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPDSMGKTYEFVGPD 278 (391)
T ss_pred h--hCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCccccCceeeecCCc
Confidence 2 235689999999999998777666666655444454 222 356679999999999999999998666 99999999
Q ss_pred CCCHHHHHHHHHHHhCCC---CCCCccHHHHH
Q 020476 255 PVRLAEMCDHLGNVLGRP---SWLPVPEFALK 283 (325)
Q Consensus 255 ~~s~~e~~~~i~~~~g~~---~~~~~~~~~~~ 283 (325)
.+.+.|+++.+.+...+- ...+.|.....
T Consensus 279 ~yql~eLvd~my~~~~~~~ry~r~~mP~f~a~ 310 (391)
T KOG2865|consen 279 RYQLSELVDIMYDMAREWPRYVRLPMPIFKAM 310 (391)
T ss_pred hhhHHHHHHHHHHHHhhccccccCCcHHHHHH
Confidence 999999999998888763 23455555433
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.8e-22 Score=170.88 Aligned_cols=232 Identities=14% Similarity=0.076 Sum_probs=161.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.+++|||||+|+||++++++|+++|++|+++.|+++........ .....+..+|+.|.+++.++++ ++|+||
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987543322111 0111244689999888776653 589999
Q ss_pred ECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||..... .+..+.....+++|+.++.++++++ ++ .+.+++|++||... ... .+....|
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~--~~~---------~~~~~~Y 148 (276)
T PRK06482 82 SNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRR--QGGGRIVQVSSEGG--QIA---------YPGFSLY 148 (276)
T ss_pred ECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcCccc--ccC---------CCCCchh
Confidence 999975332 2344566788899999999999986 54 46678999999764 211 1234567
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceE---EcCCCCcc------cc-hH-HHHHHHcCCCCCCCcceeeeccHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIV---LGKDGGAL------AK-MI-PLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i---~g~~~~~~------~~-~~-~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+|...+.....+..+ .+++++++||+.+ ||++.... .. .. ...+.....++ .-+.+++
T Consensus 149 ~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~d~~ 222 (276)
T PRK06482 149 HATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSF------AIPGDPQ 222 (276)
T ss_pred HHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccC------CCCCCHH
Confidence 7787777666655543 5999999999988 55432110 00 01 11111111111 1146899
Q ss_pred HHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhC
Q 020476 230 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g 270 (325)
|++++++.++..+.....||+++++..+..|+++.+.+.++
T Consensus 223 ~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 223 KMVQAMIASADQTPAPRRLTLGSDAYASIRAALSERLAALE 263 (276)
T ss_pred HHHHHHHHHHcCCCCCeEEecChHHHHHHHHHHHHHHHHHH
Confidence 99999999998776566899999988888888887777764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.6e-21 Score=199.96 Aligned_cols=252 Identities=17% Similarity=0.218 Sum_probs=173.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC----CeEEEEecCCCcccccCCC--------------CCccccCceeec------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPG--------------KKTRFFPGVMIA------ 75 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~--------------~~~~~~~~~d~~------ 75 (325)
.++|+|||||||+|+++++.|++++ ++|+++.|+.......... .....+..+|+.
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~~~gDl~~~~lgl 1050 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIEVVLGDLSKEKFGL 1050 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceEEEeccCCCccCCc
Confidence 4689999999999999999999876 7999999975432211000 000112334554
Q ss_pred CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC-----
Q 020476 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----- 150 (325)
Q Consensus 76 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~----- 150 (325)
+.+.+.++.+++|+|||+|+... + ......+...|+.++.+++++|++ .+.++++|+||.++ |+...
T Consensus 1051 ~~~~~~~l~~~~d~iiH~Aa~~~---~-~~~~~~~~~~nv~gt~~ll~~a~~--~~~~~~v~vSS~~v--~~~~~~~~~~ 1122 (1389)
T TIGR03443 1051 SDEKWSDLTNEVDVIIHNGALVH---W-VYPYSKLRDANVIGTINVLNLCAE--GKAKQFSFVSSTSA--LDTEYYVNLS 1122 (1389)
T ss_pred CHHHHHHHHhcCCEEEECCcEec---C-ccCHHHHHHhHHHHHHHHHHHHHh--CCCceEEEEeCeee--cCcccccchh
Confidence 33456667779999999999652 1 223455667899999999999998 67889999999988 75321
Q ss_pred -------CceecCCCC-------CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc---ccchHHHH-H-H
Q 020476 151 -------TEVFDESSP-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF-M-M 210 (325)
Q Consensus 151 -------~~~~~e~~~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~---~~~~~~~~-~-~ 210 (325)
...+.|+.+ ....| .+|...|.....+.. .|++++++||+.|||+.... ...++..+ . .
T Consensus 1123 ~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~-~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~ 1201 (1389)
T TIGR03443 1123 DELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGK-RGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGC 1201 (1389)
T ss_pred hhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHh-CCCCEEEECCCccccCCCcCCCCchhHHHHHHHHH
Confidence 112233322 12357 788888887776655 49999999999999985321 12222222 1 1
Q ss_pred HcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHH
Q 020476 211 FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFA 281 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~ 281 (325)
...+..++....+++++++|++++++.++.++. ...+||++++..+++.++++.+.+. |.+ ..++.++|.
T Consensus 1202 ~~~~~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~-g~~~~~~~~~~w~ 1275 (1389)
T TIGR03443 1202 IQLGLIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY-GYDVEIVDYVHWR 1275 (1389)
T ss_pred HHhCCcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh-CCCCCccCHHHHH
Confidence 122233455567899999999999999987653 2248999999899999999999764 554 334444443
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-22 Score=167.85 Aligned_cols=240 Identities=18% Similarity=0.186 Sum_probs=154.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccc---cCCCCC------ccccC-----ceeec------CCch
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL---IFPGKK------TRFFP-----GVMIA------EEPQ 79 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~~~~~~------~~~~~-----~~d~~------d~~~ 79 (325)
+++++||||||+|++|+.+|+.+-. +|+|++|..+.... +..... ..... ..|+. +...
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~vv~gDl~e~~lGL~~~~ 80 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVEVVAGDLAEPDLGLSERT 80 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEEEEecccccccCCCCHHH
Confidence 4799999999999999999998754 99999997763211 111100 00011 12333 4557
Q ss_pred hHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCce--ecCC
Q 020476 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV--FDES 157 (325)
Q Consensus 80 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~--~~e~ 157 (325)
+.++.+.+|.|||+|+.+.. ..++.++...||.||..+++.|.. ...|+++|+||.++..+....+.. .++.
T Consensus 81 ~~~La~~vD~I~H~gA~Vn~----v~pYs~L~~~NVlGT~evlrLa~~--gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~ 154 (382)
T COG3320 81 WQELAENVDLIIHNAALVNH----VFPYSELRGANVLGTAEVLRLAAT--GKPKPLHYVSSISVGETEYYSNFTVDFDEI 154 (382)
T ss_pred HHHHhhhcceEEecchhhcc----cCcHHHhcCcchHhHHHHHHHHhc--CCCceeEEEeeeeeccccccCCCccccccc
Confidence 78888899999999997532 335678899999999999999998 778899999999994322222211 2222
Q ss_pred CC-------CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC---CcccchHHHH--HHHcCCCCCCCcceee
Q 020476 158 SP-------SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG---GALAKMIPLF--MMFAGGPLGSGQQWFS 224 (325)
Q Consensus 158 ~~-------~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~ 224 (325)
++ +...| .+|+..|......... |++++|+|||.|.|+.. .+...++..+ ....-+.+.+.....+
T Consensus 155 ~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~r-GLpv~I~Rpg~I~gds~tG~~n~~D~~~Rlv~~~~~lg~~P~~~~~~~ 233 (382)
T COG3320 155 SPTRNVGQGLAGGYGRSKWVAEKLVREAGDR-GLPVTIFRPGYITGDSRTGALNTRDFLTRLVLGLLQLGIAPDSEYSLD 233 (382)
T ss_pred cccccccCccCCCcchhHHHHHHHHHHHhhc-CCCeEEEecCeeeccCccCccccchHHHHHHHHHHHhCCCCCcccchh
Confidence 22 24568 8999999988887776 99999999999999843 2233333322 1122222222222223
Q ss_pred ecc-----------HHHHHHHHHHHHcCCC-CCceEE-eeCCCCCCHHHHHHHHHH
Q 020476 225 WIH-----------LDDIVNLIYEALSNPS-YRGVIN-GTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 225 ~v~-----------v~D~a~a~~~~~~~~~-~~~~~~-~~~~~~~s~~e~~~~i~~ 267 (325)
.+. +.-+++++..+..++. ....|+ ...|..+...++.+.+.+
T Consensus 234 ~~p~~~v~~~v~~~~~~~~~~~~~l~~~~~~~f~~~~~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 234 MLPVDHVARAVVAPSVQVAEAIAALGAHSDIRFNQLHMLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred hCccceeeEEeehhhhhHHHHHHHhccCccchhhheecccCCCccchhHHHHhHhh
Confidence 333 2334444444443332 223444 233778999999999988
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=156.05 Aligned_cols=218 Identities=18% Similarity=0.058 Sum_probs=147.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
++|+|+||||+|+||++++++|+++|++|+++.|+....... ........+..+|+.|.+.+.++++ +
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999998888765432110 0001111244678888888776653 5
Q ss_pred CCEEEECCCCCCCCC---CChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+|||+||...... ...+.....+++|+.++.++++.+ ++ .+.+++|++||... +... +
T Consensus 85 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~i~~SS~~~--~~~~---------~ 151 (249)
T PRK12825 85 IDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRK--QRGGRIVNISSVAG--LPGW---------P 151 (249)
T ss_pred CCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEECcccc--CCCC---------C
Confidence 799999999643222 245567788899999999888877 44 46789999999876 3211 1
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .+++++++||+.++++.......... .......+ ...+++.+|+++++
T Consensus 152 ~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~dva~~~ 224 (249)
T PRK12825 152 GRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAR-EAKDAETP------LGRSGTPEDIARAV 224 (249)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhH-HhhhccCC------CCCCcCHHHHHHHH
Confidence 23456 6666555555444332 58999999999999986432211100 01100111 22389999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
..+++++. .+.+|++.++..+
T Consensus 225 ~~~~~~~~~~~~g~~~~i~~g~~~ 248 (249)
T PRK12825 225 AFLCSDASDYITGQVIEVTGGVDV 248 (249)
T ss_pred HHHhCccccCcCCCEEEeCCCEee
Confidence 99997653 3459999988654
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=159.89 Aligned_cols=238 Identities=12% Similarity=0.020 Sum_probs=159.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
++++|+||||+|+||++++++|+++|++|++++|+++........ ........+|+.|.+++.++++ ++|+|
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 346899999999999999999999999999999987653322111 0011134688888888766553 57999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .+...+.+...+++|+.++..+++++ ++ .+.+++|++||... +... +....
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~vsS~~~--~~~~---------~~~~~ 148 (275)
T PRK08263 82 VNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLRE--QRSGHIIQISSIGG--ISAF---------PMSGI 148 (275)
T ss_pred EECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEcChhh--cCCC---------CCccH
Confidence 999997533 23355678889999999987777665 45 45679999999766 4321 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-c--cchHHHHHHHcCCCCCCCcceeee-ccHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L--AKMIPLFMMFAGGPLGSGQQWFSW-IHLDDIVNLI 235 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~-v~v~D~a~a~ 235 (325)
| .+|...+.....+..+ .|++++++||+.+..+.... . ........... ..+........+ ++++|+++++
T Consensus 149 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~p~dva~~~ 227 (275)
T PRK08263 149 YHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLR-EELAEQWSERSVDGDPEAAAEAL 227 (275)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHH-HHHHHHHHhccCCCCHHHHHHHH
Confidence 7 6776665555444443 58999999999887753210 0 00000000000 000001112235 8899999999
Q ss_pred HHHHcCCCCCceEEeeC-CCCCCHHHHHHHHHHHhC
Q 020476 236 YEALSNPSYRGVINGTA-PNPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~-~~~~s~~e~~~~i~~~~g 270 (325)
+.+++.+...+.|.+++ +..+++.++.+.+.++.+
T Consensus 228 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (275)
T PRK08263 228 LKLVDAENPPLRLFLGSGVLDLAKADYERRLATWEE 263 (275)
T ss_pred HHHHcCCCCCeEEEeCchHHHHHHHHHHHHHHHHHH
Confidence 99999877666555554 467999999999998643
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=159.62 Aligned_cols=219 Identities=16% Similarity=0.090 Sum_probs=146.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++|||||+|+||.++++.|+++|++|++++|+++....... ......+..+|+.|.+.+.++++ ++|
T Consensus 7 ~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 86 (262)
T PRK13394 7 GKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSVD 86 (262)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998754322111 11111234678888888876654 489
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHH----HHHHHHHH-hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLI-NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~~~-~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+||||||..... ....+..+..+++|+.+ +.++++.+ +. .+.+++|++||... +. ..+.
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~--~~~~~iv~~ss~~~--~~---------~~~~ 153 (262)
T PRK13394 87 ILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKD--DRGGVVIYMGSVHS--HE---------ASPL 153 (262)
T ss_pred EEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--cCCcEEEEEcchhh--cC---------CCCC
Confidence 999999974321 23455677788899999 77777777 55 56789999999754 21 1123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcC--------CCCCCCcceeeeccH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG--------GPLGSGQQWFSWIHL 228 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~v~v 228 (325)
...| .+|...+.....+..+ .+++++++||+.++++.... ..+......+ ..+..+...++++++
T Consensus 154 ~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (262)
T PRK13394 154 KSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDK---QIPEQAKELGISEEEVVKKVMLGKTVDGVFTTV 230 (262)
T ss_pred CcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhh---hhHhhhhccCCChHHHHHHHHhcCCCCCCCCCH
Confidence 3456 5666555444444332 48999999999999874211 0110000000 001223445679999
Q ss_pred HHHHHHHHHHHcCCC--C-CceEEeeCCC
Q 020476 229 DDIVNLIYEALSNPS--Y-RGVINGTAPN 254 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~--~-~~~~~~~~~~ 254 (325)
+|++++++.++..+. . +..|++.++.
T Consensus 231 ~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 231 EDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred HHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 999999999997653 2 3478887764
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-21 Score=152.28 Aligned_cols=296 Identities=17% Similarity=0.144 Sum_probs=201.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-----CCC-----CCccccCceeecCCchhHhhhC--CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPG-----KKTRFFPGVMIAEEPQWRDCIQ--GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~-----~~~~~~~~~d~~d~~~~~~~~~--~~d 88 (325)
+-.||||-||.=|++|++.|++.|++|.++.|+.++-... ... ...-...-.|+.|...+.+++. +++
T Consensus 29 kvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mkLHYgDmTDss~L~k~I~~ikPt 108 (376)
T KOG1372|consen 29 KVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMKLHYGDMTDSSCLIKLISTIKPT 108 (376)
T ss_pred eEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchhhhhhhhcCchhcccceeEEeeccccchHHHHHHHhccCch
Confidence 3589999999999999999999999999999977653221 111 1100122367788888988886 789
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY- 164 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y- 164 (325)
-|+|+|+..+. ..+-+-++-.-++...|+..|+++.+.+. ...-||...||+.. ||.....|..|.+|. .++|
T Consensus 109 EiYnLaAQSHV-kvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSEl--yGkv~e~PQsE~TPFyPRSPYa 185 (376)
T KOG1372|consen 109 EVYNLAAQSHV-KVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSEL--YGKVQEIPQSETTPFYPRSPYA 185 (376)
T ss_pred hhhhhhhhcce-EEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhh--cccccCCCcccCCCCCCCChhH
Confidence 99999997532 22233334445567788999999988752 22347888899888 999999999999984 5678
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCC-----CCcc-cchHHHH-HHHcCCC----CCCCcceeeeccHHHHHH
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKD-----GGAL-AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~-----~~~~-~~~~~~~-~~~~~~~----~~~~~~~~~~v~v~D~a~ 233 (325)
.+|...-|....+.+.+++-.| -|..|... .... +++.... +...++. +++-+..+||-|..|.++
T Consensus 186 ~aKmy~~WivvNyREAYnmfAc---NGILFNHESPRRGenFVTRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~dYVE 262 (376)
T KOG1372|consen 186 AAKMYGYWIVVNYREAYNMFAC---NGILFNHESPRRGENFVTRKITRSVAKISLGQQEKIELGNLSALRDWGHAGDYVE 262 (376)
T ss_pred HhhhhheEEEEEhHHhhcceee---ccEeecCCCCccccchhhHHHHHHHHHhhhcceeeEEecchhhhcccchhHHHHH
Confidence 6777666766666666554433 34444432 1122 1222222 2222322 488889999999999999
Q ss_pred HHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCcc-HHHHHH----------HhCccceeeccCcccChh
Q 020476 234 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVP-EFALKA----------VLGEGAFVVLEGQRVVPA 302 (325)
Q Consensus 234 a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~-~~~~~~----------~~~~~~~~~~~~~~~~~~ 302 (325)
|+...++++. ..-|.++.++..|++||.+......|+...+.-. ...... ...-..+...+...-+.+
T Consensus 263 AMW~mLQ~d~-PdDfViATge~hsVrEF~~~aF~~ig~~l~Weg~gv~~~~~n~~g~v~V~v~~kYyRPtEVd~LqGdas 341 (376)
T KOG1372|consen 263 AMWLMLQQDS-PDDFVIATGEQHSVREFCNLAFAEIGEVLNWEGEGVDEVGKNDDGVVRVKVDPKYYRPTEVDTLQGDAS 341 (376)
T ss_pred HHHHHHhcCC-CCceEEecCCcccHHHHHHHHHHhhCcEEeecccccccccccCCceEEEEecccccCcchhhhhcCChH
Confidence 9999999875 5678899999999999999998888864222100 000000 000112224455566678
Q ss_pred HHH-HcCCCcccccHHHHHHHHh
Q 020476 303 RAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 303 k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
|++ .|||+|+. ++.+.+++|+
T Consensus 342 KAk~~LgW~pkv-~f~eLVkeMv 363 (376)
T KOG1372|consen 342 KAKKTLGWKPKV-TFPELVKEMV 363 (376)
T ss_pred HHHHhhCCCCcc-CHHHHHHHHH
Confidence 885 59999999 5999998886
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.5e-20 Score=167.86 Aligned_cols=227 Identities=16% Similarity=0.085 Sum_probs=147.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---------C----CccccCceeecCCchhHhhhCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---------K----KTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---------~----~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
.++|+||||+|+||++++++|++.|++|++++|+.++....... . ....+..+|+.|.+.+.+++.+
T Consensus 80 gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI~~aLgg 159 (576)
T PLN03209 80 EDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQIGPALGN 159 (576)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHHHHHhcC
Confidence 35799999999999999999999999999999987654322110 0 0112456899999999999999
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
+|+||||+|.... ........+++|+.++.++++++++ .++++||++||.++...+... .. ......| .
T Consensus 160 iDiVVn~AG~~~~---~v~d~~~~~~VN~~Gt~nLl~Aa~~--agVgRIV~VSSiga~~~g~p~-~~----~~sk~~~~~ 229 (576)
T PLN03209 160 ASVVICCIGASEK---EVFDVTGPYRIDYLATKNLVDAATV--AKVNHFILVTSLGTNKVGFPA-AI----LNLFWGVLC 229 (576)
T ss_pred CCEEEEccccccc---cccchhhHHHHHHHHHHHHHHHHHH--hCCCEEEEEccchhcccCccc-cc----hhhHHHHHH
Confidence 9999999986421 1123456678999999999999998 788999999998762111100 00 0001112 2
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-- 243 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~-- 243 (325)
.|...+.+ ....|++|++||||+++++.+..... ..+... .........+..+|+|++++.++.++.
T Consensus 230 ~KraaE~~----L~~sGIrvTIVRPG~L~tp~d~~~~t--~~v~~~-----~~d~~~gr~isreDVA~vVvfLasd~~as 298 (576)
T PLN03209 230 WKRKAEEA----LIASGLPYTIVRPGGMERPTDAYKET--HNLTLS-----EEDTLFGGQVSNLQVAELMACMAKNRRLS 298 (576)
T ss_pred HHHHHHHH----HHHcCCCEEEEECCeecCCccccccc--cceeec-----cccccCCCccCHHHHHHHHHHHHcCchhc
Confidence 22222222 22369999999999998774321100 000000 001111235889999999999998664
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~ 267 (325)
...+|.+.++.......+.+++.+
T Consensus 299 ~~kvvevi~~~~~p~~~~~~~~~~ 322 (576)
T PLN03209 299 YCKVVEVIAETTAPLTPMEELLAK 322 (576)
T ss_pred cceEEEEEeCCCCCCCCHHHHHHh
Confidence 345899988764444444444443
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.5e-20 Score=153.72 Aligned_cols=219 Identities=18% Similarity=0.080 Sum_probs=146.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.|+|+||||+|++|.+++++|+++|++|++++|+..+.... ...........+|+.|.+.+.++++ ++|
T Consensus 6 ~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 85 (251)
T PRK12826 6 GRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRLD 85 (251)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 46899999999999999999999999999999986432211 1111111234578888888877664 689
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||+++..... ....+.+...++.|+.++.++++++... ..+.+++|++||... ++. ..+....
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~--~~~--------~~~~~~~ 155 (251)
T PRK12826 86 ILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAG--PRV--------GYPGLAH 155 (251)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHh--hcc--------CCCCccH
Confidence 999999875331 3345567788999999999998877311 045678999999865 411 1122345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+ .+++++++||+.++|+..................++ ..+++++|+|+++..++
T Consensus 156 y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~ 229 (251)
T PRK12826 156 YAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPL------GRLGEPEDIAAAVLFLA 229 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCC------CCCcCHHHHHHHHHHHh
Confidence 6 6666555555444332 489999999999999864322111000111112222 24799999999999988
Q ss_pred cCCC---CCceEEeeCCC
Q 020476 240 SNPS---YRGVINGTAPN 254 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~ 254 (325)
..+. .+.+|++.+|.
T Consensus 230 ~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 230 SDEARYITGQTLPVDGGA 247 (251)
T ss_pred CccccCcCCcEEEECCCc
Confidence 7643 34588888765
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.3e-19 Score=150.57 Aligned_cols=220 Identities=14% Similarity=0.104 Sum_probs=142.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCC-CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPG-KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~-~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++|+||||+|+||++++++|+++|++|++++|+.... ... ... .....+..+|+.|.+.+.++++ +
T Consensus 6 ~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 85 (249)
T PRK09135 6 AKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFGR 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999874321 111 000 0011244679989888877664 5
Q ss_pred CCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|+|||+||..... ....+.+...+++|+.++.++++++.... .....++.+++. .+.. ..++..
T Consensus 86 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~ 154 (249)
T PRK09135 86 LDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDI----HAER-------PLKGYP 154 (249)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeCh----hhcC-------CCCCch
Confidence 79999999964321 22345677889999999999999986420 122344444432 1111 112345
Q ss_pred ch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+. +++++++||+.++|+.... +..... .....+.++ ..+.+++|+|+++..+
T Consensus 155 ~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~-~~~~~~~~~------~~~~~~~d~a~~~~~~ 227 (249)
T PRK09135 155 VYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEAR-QAILARTPL------KRIGTPEDIAEAVRFL 227 (249)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHH-HHHHhcCCc------CCCcCHHHHHHHHHHH
Confidence 67 77887777776655542 6999999999999997532 111111 111122221 1133589999999776
Q ss_pred HcCCC--CCceEEeeCCCCCC
Q 020476 239 LSNPS--YRGVINGTAPNPVR 257 (325)
Q Consensus 239 ~~~~~--~~~~~~~~~~~~~s 257 (325)
+.+.. .+.+||+.++..++
T Consensus 228 ~~~~~~~~g~~~~i~~g~~~~ 248 (249)
T PRK09135 228 LADASFITGQILAVDGGRSLT 248 (249)
T ss_pred cCccccccCcEEEECCCeecc
Confidence 65432 34489999987654
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=8.2e-20 Score=153.88 Aligned_cols=218 Identities=17% Similarity=0.082 Sum_probs=142.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhh-------hCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDC-------IQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~-------~~~~d~ 89 (325)
+++|||||+|+||++++++|+++|++|++++|+++....... .........+|+.|.+++.++ +.++|+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 81 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI 81 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 589999999999999999999999999999998654322211 001111345788888855443 346899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||+|+.... .....+.....++.|+.++..+++++ ++ .+.+++|++||... +... +..+
T Consensus 82 vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~~v~~ss~~~--~~~~---------~~~~ 148 (255)
T TIGR01963 82 LVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKK--QGWGRIINIASAHG--LVAS---------PFKS 148 (255)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCeEEEEEcchhh--cCCC---------CCCc
Confidence 9999986532 22334456777889999977777766 55 56779999998765 3211 1234
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC--------CCCCCcceeeeccHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG--------PLGSGQQWFSWIHLDD 230 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~v~v~D 230 (325)
.| .+|...+.....+.. ..+++++++||+.++++.... .........+. .+..+...+++++++|
T Consensus 149 ~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 225 (255)
T TIGR01963 149 AYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEK---QIADQAKTRGIPEEQVIREVMLPGQPTKRFVTVDE 225 (255)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHH---HHHhhhcccCCCchHHHHHHHHccCccccCcCHHH
Confidence 56 556554444433332 248999999999999874210 01000000000 0122345567999999
Q ss_pred HHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 231 IVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 231 ~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+|++++.+++++. .+..|++.++.
T Consensus 226 ~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 226 VAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred HHHHHHHHcCccccCccceEEEEcCcc
Confidence 9999999997642 34478888764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=154.17 Aligned_cols=235 Identities=19% Similarity=0.120 Sum_probs=156.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++||||+|+||+++++.|+++|++|++++|++++....... ........+|+.|++++.++++
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 357999999999999999999999999999999986543221110 0001133578888888776664
Q ss_pred CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|+|||+||.... .....+.....+++|+.++..+++++.+.. .+.++++++||... +.. .+
T Consensus 86 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~ 154 (276)
T PRK05875 86 RLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAA--SNT---------HR 154 (276)
T ss_pred CCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhh--cCC---------CC
Confidence 68999999985311 223445567788899999988887664320 23458999999866 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .+++++++||+.+.++............ ......+ ...+.+++|++++
T Consensus 155 ~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~ 228 (276)
T PRK05875 155 WFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTP------LPRVGEVEDVANL 228 (276)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCC------CCCCcCHHHHHHH
Confidence 34567 7777777666655543 3799999999988766321110000100 1111111 2336789999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCC----CHHHHHHHHHHHhC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPV----RLAEMCDHLGNVLG 270 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~----s~~e~~~~i~~~~g 270 (325)
+..+++++. .+.++++.++..+ +..|+++.+....|
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 271 (276)
T PRK05875 229 AMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGADG 271 (276)
T ss_pred HHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhHHH
Confidence 999998765 2458999988765 77777777665544
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.84 E-value=3.3e-21 Score=160.05 Aligned_cols=215 Identities=23% Similarity=0.262 Sum_probs=142.1
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|+|+||||.+|+++++.|++.+++|++++|++++. ..+...+. ....+|+.|.+.+.++++++|+||.+.+...
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~--~vv~~d~~~~~~l~~al~g~d~v~~~~~~~~-- 76 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGA--EVVEADYDDPESLVAALKGVDAVFSVTPPSH-- 76 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTT--EEEES-TT-HHHHHHHHTTCSEEEEESSCSC--
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccc--eEeecccCCHHHHHHHHcCCceEEeecCcch--
Confidence 79999999999999999999999999999998542 22222211 1446788899999999999999999987431
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC---chHHHHHHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN---DYLAEVCREWEGTAL 177 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~---~y~~k~~~~~~~~~~ 177 (325)
. .......++++++++ .++++||+.|.... +. +.....+ .|..|. ..+.+
T Consensus 77 ---~--------~~~~~~~~li~Aa~~--agVk~~v~ss~~~~--~~--------~~~~~~p~~~~~~~k~----~ie~~ 129 (233)
T PF05368_consen 77 ---P--------SELEQQKNLIDAAKA--AGVKHFVPSSFGAD--YD--------ESSGSEPEIPHFDQKA----EIEEY 129 (233)
T ss_dssp ---C--------CHHHHHHHHHHHHHH--HT-SEEEESEESSG--TT--------TTTTSTTHHHHHHHHH----HHHHH
T ss_pred ---h--------hhhhhhhhHHHhhhc--cccceEEEEEeccc--cc--------ccccccccchhhhhhh----hhhhh
Confidence 1 225566799999999 78999886443322 11 1111111 223332 22333
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC---CC-CCCcceeeec-cHHHHHHHHHHHHcCCCCC--c-eEE
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG---PL-GSGQQWFSWI-HLDDIVNLIYEALSNPSYR--G-VIN 249 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~v-~v~D~a~a~~~~~~~~~~~--~-~~~ 249 (325)
.++.+++++++||+..+...... +.......... .+ ++++....++ +.+|+++++..++.++... + .+.
T Consensus 130 l~~~~i~~t~i~~g~f~e~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~ 206 (233)
T PF05368_consen 130 LRESGIPYTIIRPGFFMENLLPP---FAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIF 206 (233)
T ss_dssp HHHCTSEBEEEEE-EEHHHHHTT---THHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEE
T ss_pred hhhccccceeccccchhhhhhhh---hcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEE
Confidence 34459999999999877542111 11100111111 11 5566566675 9999999999999997643 4 555
Q ss_pred eeCCCCCCHHHHHHHHHHHhCCC
Q 020476 250 GTAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 250 ~~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
+++ +.+|+.|+++.+.+.+|++
T Consensus 207 ~~~-~~~t~~eia~~~s~~~G~~ 228 (233)
T PF05368_consen 207 LAG-ETLTYNEIAAILSKVLGKK 228 (233)
T ss_dssp EGG-GEEEHHHHHHHHHHHHTSE
T ss_pred eCC-CCCCHHHHHHHHHHHHCCc
Confidence 554 6799999999999999986
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=151.39 Aligned_cols=218 Identities=20% Similarity=0.150 Sum_probs=144.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
++|+|+||||+|+||.++++.|+++|++|++++|++.+...... ......+..+|+.|++.+.++++ .+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999999999998765322111 01111134578888887766654 46
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||++|.... .....+.....++.|+.++.++++++... ..+.+++|++||.... ++. +...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~-~~~----------~~~~ 152 (246)
T PRK05653 84 DILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGV-TGN----------PGQT 152 (246)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhc-cCC----------CCCc
Confidence 999999987432 12344556778899999999888877421 0456799999987541 221 2234
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+.+ ..+++++++||+.++++........... ......+ ...+++.+|+++++..+
T Consensus 153 ~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~dva~~~~~~ 225 (246)
T PRK05653 153 NYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKA-EILKEIP------LGRLGQPEEVANAVAFL 225 (246)
T ss_pred HhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHH-HHHhcCC------CCCCcCHHHHHHHHHHH
Confidence 56 566555544444333 2489999999999998864321111110 1111111 24578999999999999
Q ss_pred HcCCC---CCceEEeeCCC
Q 020476 239 LSNPS---YRGVINGTAPN 254 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~ 254 (325)
+.... .+.+|++.+|.
T Consensus 226 ~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 226 ASDAASYITGQVIPVNGGM 244 (246)
T ss_pred cCchhcCccCCEEEeCCCe
Confidence 97533 23488888775
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=5.4e-20 Score=155.17 Aligned_cols=227 Identities=11% Similarity=0.024 Sum_probs=151.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||.++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|++|
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987654332111 0011244678888888876664 589999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
|+||.... .....+.+...+++|+.++.++++++.... ....++|++||.... ++. +....|
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~ 154 (257)
T PRK07067 86 NNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGR-RGE----------ALVSHYC 154 (257)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhC-CCC----------CCCchhh
Confidence 99986532 223456778889999999999998885420 122579999986531 321 234567
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHH----HHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.+|...+.....+.. ..++++++++|+.++++............. ......+........+.+.+|+|+++..
T Consensus 155 ~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 234 (257)
T PRK07067 155 ATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALF 234 (257)
T ss_pred hhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHH
Confidence 677666655554443 358999999999999874211111110000 0000011233345678999999999999
Q ss_pred HHcCCC---CCceEEeeCCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~s 257 (325)
++..+. .+.+|++.+|+.+|
T Consensus 235 l~s~~~~~~~g~~~~v~gg~~~~ 257 (257)
T PRK07067 235 LASADADYIVAQTYNVDGGNWMS 257 (257)
T ss_pred HhCcccccccCcEEeecCCEeCC
Confidence 998653 34599999886553
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=153.61 Aligned_cols=219 Identities=14% Similarity=0.005 Sum_probs=143.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
+++|+||||+|+||++++++|+++|++|++++|++++...+.... .......+|+.|.+++.++++ ++|+||
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 468999999999999999999999999999999876543322211 001134578889888876665 589999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|+||.... .+...+.....+++|+.++.++++++ ++ .+.+++|++||... +.. .+....|
T Consensus 84 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~iSS~~~--~~~---------~~~~~~Y 150 (277)
T PRK06180 84 NNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRA--RRRGHIVNITSMGG--LIT---------MPGIGYY 150 (277)
T ss_pred ECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--cCCCEEEEEecccc--cCC---------CCCcchh
Confidence 99997432 22334556778999999999998874 33 35578999999765 321 1234567
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--------ccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+|...+.....+..+ .|++++++||+.+.++.... .......+....... .......+..++|+|
T Consensus 151 ~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~dva 228 (277)
T PRK06180 151 CGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAR--EAKSGKQPGDPAKAA 228 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHH--HhhccCCCCCHHHHH
Confidence 6676666555444432 48999999999997753211 111111110000000 001112356899999
Q ss_pred HHHHHHHcCCCCCceEEeeCC
Q 020476 233 NLIYEALSNPSYRGVINGTAP 253 (325)
Q Consensus 233 ~a~~~~~~~~~~~~~~~~~~~ 253 (325)
++++.+++.+.....|.++..
T Consensus 229 ~~~~~~l~~~~~~~~~~~g~~ 249 (277)
T PRK06180 229 QAILAAVESDEPPLHLLLGSD 249 (277)
T ss_pred HHHHHHHcCCCCCeeEeccHH
Confidence 999999988765445544433
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=154.00 Aligned_cols=224 Identities=15% Similarity=0.071 Sum_probs=145.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHh---h---hCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRD---C---IQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~---~---~~~~ 87 (325)
+++++||||+|+||+++++.|+++|++|++++|+++........ ........+|+.|++++.+ + +.++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 45799999999999999999999999999999987543222110 0111244678888887764 1 1357
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+||||||.... .+...+.....+++|+.++.++++++ ++ .+.+++|++||.... ++. +.
T Consensus 83 d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~vsS~~~~-~~~----------~~ 149 (280)
T PRK06914 83 DLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRK--QKSGKIINISSISGR-VGF----------PG 149 (280)
T ss_pred eEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEECccccc-CCC----------CC
Confidence 999999987533 22334566778889999988887774 55 456789999986541 332 22
Q ss_pred CCch-HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCc-c----------cchHHHHHHHcCCCCCCCcceeee
Q 020476 161 GNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGA-L----------AKMIPLFMMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~ 225 (325)
...| .+|...+.....+. ...+++++++|||.+.++.... . ........... ..+ ......+
T Consensus 150 ~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~ 226 (280)
T PRK06914 150 LSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQ-KHI--NSGSDTF 226 (280)
T ss_pred CchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHH-HHH--hhhhhcc
Confidence 3456 56666555554443 2358999999999998873110 0 00000000000 000 0112357
Q ss_pred ccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHH
Q 020476 226 IHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLA 259 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~ 259 (325)
++++|+|++++.+++++.....|+++++..+++.
T Consensus 227 ~~~~dva~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (280)
T PRK06914 227 GNPIDVANLIVEIAESKRPKLRYPIGKGVKLMIL 260 (280)
T ss_pred CCHHHHHHHHHHHHcCCCCCcccccCCchHHHHH
Confidence 8999999999999998876567888876655444
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.6e-19 Score=152.42 Aligned_cols=219 Identities=15% Similarity=0.053 Sum_probs=142.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++|+||||+|+||.+++++|+++|++|++++|++++....... ........+|+.|++++.++++ ++|
T Consensus 4 ~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d 83 (258)
T PRK12429 4 GKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGVD 83 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999987654322110 1111134678889888877664 689
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+|+..... ....+.....+++|+.+ +..+++++++ .+.+++|++||.... ++. +..
T Consensus 84 ~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~~ 150 (258)
T PRK12429 84 ILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKA--QGGGRIINMASVHGL-VGS----------AGK 150 (258)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCCeEEEEEcchhhc-cCC----------CCc
Confidence 999999864332 22344566678899988 5555666666 567899999998651 221 123
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC--------CCCCcceeeeccHH
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--------LGSGQQWFSWIHLD 229 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~v~v~ 229 (325)
+.| .+|...+.....+.. ..++++.++||+.++++..... ........+.+ +......+.+++++
T Consensus 151 ~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (258)
T PRK12429 151 AAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQ---IPDLAKERGISEEEVLEDVLLPLVPQKRFTTVE 227 (258)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhh---hhhhccccCCChHHHHHHHHhccCCccccCCHH
Confidence 445 555544433333322 2489999999999998752110 00000000000 11222345799999
Q ss_pred HHHHHHHHHHcCCC--C-CceEEeeCCC
Q 020476 230 DIVNLIYEALSNPS--Y-RGVINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~-~~~~~~~~~~ 254 (325)
|+|+++..++.... . +..|++.+|.
T Consensus 228 d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 228 EIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred HHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 99999999987643 2 3478887663
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.1e-19 Score=149.79 Aligned_cols=232 Identities=16% Similarity=0.092 Sum_probs=154.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC--CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
+++++||||+|+||.++++.|+++|++|++++|++.+....... ........+|+.|.+++.++++ ++|+|
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999987653222110 0011244688989988876664 48999
Q ss_pred EECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||++|..... ....+......++|+.++.++++++... ..+.+++|++||... +... ..+.|
T Consensus 82 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~----------~~~~y~ 149 (257)
T PRK07074 82 VANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNG--MAAL----------GHPAYS 149 (257)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--cCCC----------CCcccH
Confidence 9999864321 2234445566789999888888777321 045578999998654 2111 12356
Q ss_pred HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+ .++++..+||+.++++..... ........... .....+++++++|+++++..+++
T Consensus 150 ~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~d~a~~~~~l~~ 224 (257)
T PRK07074 150 AAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELK-----KWYPLQDFATPDDVANAVLFLAS 224 (257)
T ss_pred HHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHH-----hcCCCCCCCCHHHHHHHHHHHcC
Confidence 6666665555555433 379999999999988742211 00111111110 01223578999999999999997
Q ss_pred CCC--CCc-eEEeeCCCCCCHHHHHHHHHHH
Q 020476 241 NPS--YRG-VINGTAPNPVRLAEMCDHLGNV 268 (325)
Q Consensus 241 ~~~--~~~-~~~~~~~~~~s~~e~~~~i~~~ 268 (325)
+.. ..| .+++.++...+..|+++.+.+.
T Consensus 225 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~ 255 (257)
T PRK07074 225 PAARAITGVCLPVDGGLTAGNREMARTLTLE 255 (257)
T ss_pred chhcCcCCcEEEeCCCcCcCChhhhhhhccc
Confidence 532 334 7788888889999999987653
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=151.86 Aligned_cols=218 Identities=17% Similarity=0.135 Sum_probs=144.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+++++||||+|+||++++++|+++|++|+++.|+......... ......+..+|+.+.+++.++++ ++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999987644322111 01111133578888888876654 579
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||+||.... .....+.....+++|+.++.++++++... ..+.+++|++||... +... +....
T Consensus 90 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~ 158 (274)
T PRK07775 90 VLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVA--LRQR---------PHMGA 158 (274)
T ss_pred EEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHh--cCCC---------CCcch
Confidence 99999997532 22234566777899999999888776421 034568999999866 4321 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-Ccccc-hHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+.....+..+ .|++++++|||.+.++.. ..... .......... ......+.+++++|+|++++.
T Consensus 159 Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~dva~a~~~ 235 (274)
T PRK07775 159 YGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAK---WGQARHDYFLRASDLARAITF 235 (274)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHH---hcccccccccCHHHHHHHHHH
Confidence 7 7777777666655543 389999999998865521 11111 1111111110 011223568999999999999
Q ss_pred HHcCCCCCceEEee
Q 020476 238 ALSNPSYRGVINGT 251 (325)
Q Consensus 238 ~~~~~~~~~~~~~~ 251 (325)
+++++....+||+.
T Consensus 236 ~~~~~~~~~~~~~~ 249 (274)
T PRK07775 236 VAETPRGAHVVNME 249 (274)
T ss_pred HhcCCCCCCeeEEe
Confidence 99887544477776
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=147.26 Aligned_cols=208 Identities=13% Similarity=0.119 Sum_probs=137.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
+||+++||||+|+||+++++.|+++ ++|++++|+...............+..+|+.|.+++.++++ ++|+|||++|
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag 80 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQLGRLDVLVHNAG 80 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhcCCCCEEEECCC
Confidence 3579999999999999999999999 99999999865432221111011245689999999988876 5999999999
Q ss_pred CCCCC---CCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 96 TPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 96 ~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
..... ....+.....++.|+.+ +.++++++++ ..+++|++||... ++.. +....| .+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~---~~~~~v~~ss~~~--~~~~---------~~~~~y~~~K 146 (227)
T PRK08219 81 VADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA---AHGHVVFINSGAG--LRAN---------PGWGSYAASK 146 (227)
T ss_pred cCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCeEEEEcchHh--cCcC---------CCCchHHHHH
Confidence 75321 22345566778888888 5556666665 3468999998866 4322 123456 566
Q ss_pred HHHHHHHHHHhhc-CC-ceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCC
Q 020476 168 VCREWEGTALKVN-KD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245 (325)
Q Consensus 168 ~~~~~~~~~~~~~-~~-~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~ 245 (325)
...+.....+... .+ +++..++|+.+.++.... .....+.. .....+++++|++++++.+++++...
T Consensus 147 ~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~-------~~~~~~~~----~~~~~~~~~~dva~~~~~~l~~~~~~ 215 (227)
T PRK08219 147 FALRALADALREEEPGNVRVTSVHPGRTDTDMQRG-------LVAQEGGE----YDPERYLRPETVAKAVRFAVDAPPDA 215 (227)
T ss_pred HHHHHHHHHHHHHhcCCceEEEEecCCccchHhhh-------hhhhhccc----cCCCCCCCHHHHHHHHHHHHcCCCCC
Confidence 6555544443332 24 889999988766542111 00001111 12245799999999999999987655
Q ss_pred ceEEeeC
Q 020476 246 GVINGTA 252 (325)
Q Consensus 246 ~~~~~~~ 252 (325)
.++++.-
T Consensus 216 ~~~~~~~ 222 (227)
T PRK08219 216 HITEVVV 222 (227)
T ss_pred ccceEEE
Confidence 5777654
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.2e-18 Score=146.43 Aligned_cols=218 Identities=20% Similarity=0.151 Sum_probs=147.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+.++++||||+|+||.+++++|++.|++|++++|+.+....... ......+..+|+.|.+++.++++ ++
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 34789999999999999999999999999999998654322111 00011134678888887766553 58
Q ss_pred CEEEECCCCCCC------CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|+|||+||.... .....+.....+++|+.++.++++++... ..+.+++|++||... |+
T Consensus 85 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~------------ 150 (250)
T PRK07774 85 DYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAA--WL------------ 150 (250)
T ss_pred CEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccc--cC------------
Confidence 999999996421 12234566778899999999988887652 123568999999876 43
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+.+.| .+|...+.....+..+ .++++++++||.+..+....... .... ......+. .-+.+++|++++
T Consensus 151 ~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~d~a~~ 223 (250)
T PRK07774 151 YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTP-KEFVADMVKGIPL------SRMGTPEDLVGM 223 (250)
T ss_pred CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCC-HHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence 23457 6777776666555443 48999999999988775322111 0111 12222222 124678999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
++.++.... .+.+|++.++..++
T Consensus 224 ~~~~~~~~~~~~~g~~~~v~~g~~~~ 249 (250)
T PRK07774 224 CLFLLSDEASWITGQIFNVDGGQIIR 249 (250)
T ss_pred HHHHhChhhhCcCCCEEEECCCeecc
Confidence 999987642 34589999887553
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.6e-19 Score=149.95 Aligned_cols=222 Identities=14% Similarity=0.093 Sum_probs=147.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||++++++|+++|++|++++|++++....... ........+|+.|.+++.++++ .+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 357999999999999999999999999999999987543221110 0011134578888888877664 48
Q ss_pred CEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||+||..... ....+..+..+++|+.++.++++++.+. ..+.+++|++||... .. ..+...
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~---------~~~~~~ 157 (255)
T PRK07523 89 DILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQS--AL---------ARPGIA 157 (255)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchh--cc---------CCCCCc
Confidence 9999999975322 2345556778889999999988887642 024578999998754 21 112344
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+.. ..|+++.++||+.+.++........-.... .....+ ...+..++|+|.+++.
T Consensus 158 ~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~~ 231 (255)
T PRK07523 158 PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTP------AGRWGKVEELVGACVF 231 (255)
T ss_pred cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence 56 677666655555543 358999999999999874211100001111 111112 2336789999999999
Q ss_pred HHcCCC---CCceEEeeCCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~s 257 (325)
++.++. .+.++++.++...|
T Consensus 232 l~~~~~~~~~G~~i~~~gg~~~~ 254 (255)
T PRK07523 232 LASDASSFVNGHVLYVDGGITAS 254 (255)
T ss_pred HcCchhcCccCcEEEECCCeecc
Confidence 997643 23488888876554
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.5e-19 Score=149.51 Aligned_cols=218 Identities=17% Similarity=0.064 Sum_probs=143.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
+++++||||+|+||++++++|+++|++|++++|+.++........ .....+|+.|.+++.++++ ++|+|||
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~--~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLG--VHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999999999999999999999999999999876543322111 1245689999998877765 6899999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
+||.... .+...+.++..+++|+.+ ++.+++.+++ .+.+++|++||... +.. .+....|
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y~ 147 (273)
T PRK06182 81 NAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRA--QRSGRIINISSMGG--KIY---------TPLGAWYH 147 (273)
T ss_pred CCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhh--cCC---------CCCccHhH
Confidence 9997532 222456678888999988 4555666666 56678999999754 111 1122346
Q ss_pred HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCcccc-h---------HHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 165 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAK-M---------IPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 165 ~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
.+|...+.....+. ...+++++++|||.+.++....... + ....... ...+........+.+.+|+
T Consensus 148 ~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v 226 (273)
T PRK06182 148 ATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAV-AASMRSTYGSGRLSDPSVI 226 (273)
T ss_pred HHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHH-HHHHHHhhccccCCCHHHH
Confidence 66766665544333 2358999999999998764211000 0 0000000 0000011122346799999
Q ss_pred HHHHHHHHcCCCCCceEEeeCC
Q 020476 232 VNLIYEALSNPSYRGVINGTAP 253 (325)
Q Consensus 232 a~a~~~~~~~~~~~~~~~~~~~ 253 (325)
|++++.++........|+++.+
T Consensus 227 A~~i~~~~~~~~~~~~~~~g~~ 248 (273)
T PRK06182 227 ADAISKAVTARRPKTRYAVGFG 248 (273)
T ss_pred HHHHHHHHhCCCCCceeecCcc
Confidence 9999999987654557766544
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.5e-19 Score=148.45 Aligned_cols=221 Identities=17% Similarity=0.078 Sum_probs=141.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--ccccCceeecCCchhHhhhC-------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.+++|||||+|+||++++++|+++|++|++++|+.+.......... ......+|+.|++++.++++ ++|+|
T Consensus 11 ~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 90 (264)
T PRK12829 11 GLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLDVL 90 (264)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4699999999999999999999999999999998654332211100 01144678888887776653 68999
Q ss_pred EECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCC-CCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
||+||.... .....+.....++.|+.++.++++++... ..+. ++++++||... .++. +....
T Consensus 91 i~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~-~~~~----------~~~~~ 159 (264)
T PRK12829 91 VNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAG-RLGY----------PGRTP 159 (264)
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccc-ccCC----------CCCch
Confidence 999996511 23345667888999999999888876321 0333 45777776543 1221 12345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-------CCCcceeeeccHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-------GSGQQWFSWIHLDDIV 232 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~v~D~a 232 (325)
| .+|...+.....+..+ .+++++++||++++++.... ..+......+... ........+++++|++
T Consensus 160 y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 236 (264)
T PRK12829 160 YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRR---VIEARAQQLGIGLDEMEQEYLEKISLGRMVEPEDIA 236 (264)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHH---HhhhhhhccCCChhHHHHHHHhcCCCCCCCCHHHHH
Confidence 6 6666655555444432 48999999999999885311 1110000000000 0111123589999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++..++.... .+..|++.++.
T Consensus 237 ~~~~~l~~~~~~~~~g~~~~i~~g~ 261 (264)
T PRK12829 237 ATALFLASPAARYITGQAISVDGNV 261 (264)
T ss_pred HHHHHHcCccccCccCcEEEeCCCc
Confidence 99999886432 23488888875
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-18 Score=144.87 Aligned_cols=219 Identities=15% Similarity=0.145 Sum_probs=144.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++++||||+|+||++++++|+++|++|++++|+.... .. .........+..+|+.+++++.++++ .+
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999875321 11 00101111244689998887766543 68
Q ss_pred CEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CC-----CCCEEEEeeeeeeeecCCCCcee
Q 020476 88 TAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP---EG-----VRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 88 d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~-----~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
|+||||||.... .....+.+...+++|+.++.++++++.+.. .+ .+++|++||.... ++.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~------ 154 (256)
T PRK12745 82 DCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAI-MVS------ 154 (256)
T ss_pred CEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhc-cCC------
Confidence 999999986422 123456678889999999999988774320 11 4579999997651 221
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|...+.....+..+ .+++++++||+.+.++..... ..+...+. .+ . .....+.+.+
T Consensus 155 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~--~~-~----~~~~~~~~~~ 223 (256)
T PRK12745 155 ----PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIA--KG-L----VPMPRWGEPE 223 (256)
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhh--hc-C----CCcCCCcCHH
Confidence 123457 6777776665555543 589999999999988643221 11111111 11 0 1123477999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
|+++++..++.... .+..|++.++...
T Consensus 224 d~a~~i~~l~~~~~~~~~G~~~~i~gg~~~ 253 (256)
T PRK12745 224 DVARAVAALASGDLPYSTGQAIHVDGGLSI 253 (256)
T ss_pred HHHHHHHHHhCCcccccCCCEEEECCCeec
Confidence 99999999886542 3448899887543
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.5e-19 Score=148.76 Aligned_cols=221 Identities=14% Similarity=0.078 Sum_probs=143.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||++++++|+++|++|++++|+.+.. .. +...........+|+.|++.+.++++ ++
T Consensus 6 ~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 85 (248)
T PRK07806 6 GKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGGL 85 (248)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 36899999999999999999999999999999975421 11 11000001134578899888776654 58
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|+|||+|+.... ....+...+++|+.++.++++++.+.....+++|++||.... +... .+..+....| .+
T Consensus 86 d~vi~~ag~~~~---~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-~~~~-----~~~~~~~~~Y~~s 156 (248)
T PRK07806 86 DALVLNASGGME---SGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAH-FIPT-----VKTMPEYEPVARS 156 (248)
T ss_pred cEEEECCCCCCC---CCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhh-cCcc-----ccCCccccHHHHH
Confidence 999999985321 122345677899999999999998632233589999986541 1111 1112223456 67
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+..+ .++++++++|+.+-++..... ....+.. .... ......+++++|++++++.+++.+
T Consensus 157 K~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~dva~~~~~l~~~~ 230 (248)
T PRK07806 157 KRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGA--IEAR----REAAGKLYTVSEFAAEVARAVTAP 230 (248)
T ss_pred HHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHH--HHHH----HhhhcccCCHHHHHHHHHHHhhcc
Confidence 87777666555432 489999999887766521100 0000000 0000 011236899999999999999876
Q ss_pred CCCc-eEEeeCCCC
Q 020476 243 SYRG-VINGTAPNP 255 (325)
Q Consensus 243 ~~~~-~~~~~~~~~ 255 (325)
...| +|++++++.
T Consensus 231 ~~~g~~~~i~~~~~ 244 (248)
T PRK07806 231 VPSGHIEYVGGADY 244 (248)
T ss_pred ccCccEEEecCccc
Confidence 5445 899998874
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.5e-18 Score=146.16 Aligned_cols=218 Identities=16% Similarity=0.099 Sum_probs=142.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCccccc----CCCCCccccCceeecCCchhHhhhC---------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ--------- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~--------- 85 (325)
.++|+||||+|+||++++++|+++|++|.++ .|+..+.... ...........+|+.|++.+.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 3699999999999999999999999999875 5654332111 1101111234679999888876654
Q ss_pred ----CCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 ----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ----~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+|||+||..... +...+.....+++|+.++.++++++.+.....+++|++||..+ +...
T Consensus 86 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~--~~~~--------- 154 (254)
T PRK12746 86 VGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV--RLGF--------- 154 (254)
T ss_pred cCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh--cCCC---------
Confidence 589999999975332 2234456778889999999999988753223358999998876 4311
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+....| .+|...+.....+.. ..++++++++|+.+.++.......--........ ......+++++|++++
T Consensus 155 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~dva~~ 229 (254)
T PRK12746 155 TGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATN-----SSVFGRIGQVEDIADA 229 (254)
T ss_pred CCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHh-----cCCcCCCCCHHHHHHH
Confidence 223457 667666655544443 3589999999999988742111000000111111 1112346789999999
Q ss_pred HHHHHcCCC---CCceEEeeCC
Q 020476 235 IYEALSNPS---YRGVINGTAP 253 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~ 253 (325)
+..++.++. .+.+|++.++
T Consensus 230 ~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 230 VAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHcCcccCCcCCCEEEeCCC
Confidence 998887643 3458998876
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1e-18 Score=146.92 Aligned_cols=222 Identities=15% Similarity=0.069 Sum_probs=143.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|+||||+|+||++++++|+++|++|++..|+... .... ...........+|+.+.+.+.++++ +
T Consensus 5 ~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 5 KDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 34699999999999999999999999999887765322 1110 0000011134578888887766553 6
Q ss_pred CCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|+|||+||..... ....+.....+++|+.+..++++++.+.....+++|++||... +.. .+....
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~ 153 (252)
T PRK06077 85 ADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG--IRP---------AYGLSI 153 (252)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc--cCC---------CCCchH
Confidence 89999999964221 1233345677899999988888887753123358999999866 431 123456
Q ss_pred h-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHH-HHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+. ++.+.+++|+.+.++.......+... ..... ........+++++|+|++++.++
T Consensus 154 Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~dva~~~~~~~ 229 (252)
T PRK06077 154 YGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFA----EKFTLMGKILDPEEVAEFVAAIL 229 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHH----HhcCcCCCCCCHHHHHHHHHHHh
Confidence 7 67777666666555543 78999999999987642111110000 00000 00111235899999999999999
Q ss_pred cCCC-CCceEEeeCCCC
Q 020476 240 SNPS-YRGVINGTAPNP 255 (325)
Q Consensus 240 ~~~~-~~~~~~~~~~~~ 255 (325)
+.+. .+++|++.++..
T Consensus 230 ~~~~~~g~~~~i~~g~~ 246 (252)
T PRK06077 230 KIESITGQVFVLDSGES 246 (252)
T ss_pred CccccCCCeEEecCCee
Confidence 7655 355999998864
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-18 Score=143.05 Aligned_cols=214 Identities=17% Similarity=0.094 Sum_probs=140.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|+||++++++|+++|++|++++|+..... .+...........+|+.|.+++.++++ ++|+
T Consensus 8 ~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 87 (260)
T PRK12823 8 GKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRIDV 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCeE
Confidence 468999999999999999999999999999999753211 111111111134578888877765554 6899
Q ss_pred EEECCCCCC----CCCCChhhHHHHHHHhhHHHHH----HHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 90 VVNLAGTPI----GTRWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 90 vi~~a~~~~----~~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||+||... ......+.....+++|+.++.. +++.+++ .+.+++|++||... ++. ..
T Consensus 88 lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~~sS~~~--~~~-----------~~ 152 (260)
T PRK12823 88 LINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLA--QGGGAIVNVSSIAT--RGI-----------NR 152 (260)
T ss_pred EEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEEcCccc--cCC-----------CC
Confidence 999998431 1234455677778889887664 4555555 45578999999876 531 12
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc----------ccchHHHH--HHHcCCCCCCCcceeee
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA----------LAKMIPLF--MMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~~~ 225 (325)
..| .+|...+.....+..+ .+++++.++|++++++.... ...+.+.+ ......++ .-+
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 226 (260)
T PRK12823 153 VPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM------KRY 226 (260)
T ss_pred CccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc------ccC
Confidence 357 7787777766666554 38999999999999873110 00111111 11111121 225
Q ss_pred ccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 226 IHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
.+++|+++++..++.... .+.++++.+++
T Consensus 227 ~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 227 GTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred CCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 578999999999987643 33488887764
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=7.4e-18 Score=145.21 Aligned_cols=220 Identities=14% Similarity=0.042 Sum_probs=148.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--ccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|||||+|+||+++++.|++.|++|++..|+.+.. ... ...........+|+.|.+++.++++ +
T Consensus 55 ~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 134 (300)
T PRK06128 55 GRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELGG 134 (300)
T ss_pred CCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999998887754321 111 0111111134578888887776653 6
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|+|||+||.... .+...+.+...+++|+.++..+++++........++|++||... |... +...
T Consensus 135 iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~ 203 (300)
T PRK06128 135 LDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS--YQPS---------PTLL 203 (300)
T ss_pred CCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc--cCCC---------CCch
Confidence 8999999996421 23456778899999999999999988753223368999999876 5322 1234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+..+ .|+++.+++||.+.++........-.... .....+ ...+.+.+|++.+++.
T Consensus 204 ~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~dva~~~~~ 277 (300)
T PRK06128 204 DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETP------MKRPGQPVEMAPLYVL 277 (300)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCC------CCCCcCHHHHHHHHHH
Confidence 57 6777766666555543 48999999999999885321100011111 111112 2236789999999999
Q ss_pred HHcCCC---CCceEEeeCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~ 256 (325)
++.+.. .+.+|++.+|..+
T Consensus 278 l~s~~~~~~~G~~~~v~gg~~~ 299 (300)
T PRK06128 278 LASQESSYVTGEVFGVTGGLLL 299 (300)
T ss_pred HhCccccCccCcEEeeCCCEeC
Confidence 987643 3448888888654
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=142.33 Aligned_cols=210 Identities=19% Similarity=0.226 Sum_probs=140.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC--CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.++||||||+|+||+++++.|+++|++|++++|++.+....... ........+|+.|.+++.++++ ++|+|
T Consensus 7 ~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 86 (239)
T PRK12828 7 GKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDAL 86 (239)
T ss_pred CCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCEE
Confidence 46899999999999999999999999999999977542211100 0001134588888887776654 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||+++.... .....+.....++.|+.++.++++++.+. ..+.+++|++||... ++.. +....|
T Consensus 87 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~y~ 155 (239)
T PRK12828 87 VNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAA--LKAG---------PGMGAYA 155 (239)
T ss_pred EECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHh--ccCC---------CCcchhH
Confidence 999986422 22234456677889999999888876421 146789999999876 4422 223456
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+.. ..++++.++||+.++++..... .+ ......+++++|+++++..++++
T Consensus 156 ~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~------------~~---~~~~~~~~~~~dva~~~~~~l~~ 220 (239)
T PRK12828 156 AAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD------------MP---DADFSRWVTPEQIAAVIAFLLSD 220 (239)
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc------------CC---chhhhcCCCHHHHHHHHHHHhCc
Confidence 555544443333322 2489999999999998732110 00 01112379999999999999986
Q ss_pred CC--CCc-eEEeeCCCC
Q 020476 242 PS--YRG-VINGTAPNP 255 (325)
Q Consensus 242 ~~--~~~-~~~~~~~~~ 255 (325)
+. ..| .+++.++..
T Consensus 221 ~~~~~~g~~~~~~g~~~ 237 (239)
T PRK12828 221 EAQAITGASIPVDGGVA 237 (239)
T ss_pred ccccccceEEEecCCEe
Confidence 53 234 777777653
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.5e-18 Score=145.15 Aligned_cols=223 Identities=13% Similarity=0.055 Sum_probs=145.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++|+||||+|+||.++++.|+++|++|++++|+.......... . .......+|+.+.+++.++++ +
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999986543222110 0 011244678888887765553 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+|||+||.... .....+.+...+++|+.++..+++++.+.. .+ ..++|++||.... ++. +.
T Consensus 82 id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~-~~~----------~~ 150 (259)
T PRK12384 82 VDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGK-VGS----------KH 150 (259)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCcccc-cCC----------CC
Confidence 7999999986533 233455677888999999777666554320 23 3589999886531 331 12
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC-------CCCCcceeeeccHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLD 229 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~v~ 229 (325)
...| .+|...+.....+.. ..|+++.++|||.++++.... .+++.+....+.+ ..+......+++.+
T Consensus 151 ~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (259)
T PRK12384 151 NSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQ--SLLPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQ 228 (259)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhh--hhhHHHHHhcCCChHHHHHHHHHhCcccCCCCHH
Confidence 3457 667765555444443 368999999999988764211 2222221111110 11233445689999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
|+++++..++.+.. .+.+|++.+++.
T Consensus 229 dv~~~~~~l~~~~~~~~~G~~~~v~~g~~ 257 (259)
T PRK12384 229 DVLNMLLFYASPKASYCTGQSINVTGGQV 257 (259)
T ss_pred HHHHHHHHHcCcccccccCceEEEcCCEE
Confidence 99999999887543 344899988763
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.8e-18 Score=128.09 Aligned_cols=205 Identities=18% Similarity=0.184 Sum_probs=139.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|||.|+||||.+|++|+++++++||+|++++|++++....... ...+.|+.|++.+.+.+.+.|+||..-+...
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~----~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~-- 74 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV----TILQKDIFDLTSLASDLAGHDAVISAFGAGA-- 74 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc----eeecccccChhhhHhhhcCCceEEEeccCCC--
Confidence 7999999999999999999999999999999999886554221 1456899999999999999999999876431
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch--HHHHHHHHHHHHHh
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY--LAEVCREWEGTALK 178 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y--~~k~~~~~~~~~~~ 178 (325)
.+ ..+ ........+++.++. .++.|++.++..+.- |=+.....++ .......| ..+...+.+.....
T Consensus 75 ---~~-~~~---~~~k~~~~li~~l~~--agv~RllVVGGAGSL-~id~g~rLvD-~p~fP~ey~~~A~~~ae~L~~Lr~ 143 (211)
T COG2910 75 ---SD-NDE---LHSKSIEALIEALKG--AGVPRLLVVGGAGSL-EIDEGTRLVD-TPDFPAEYKPEALAQAEFLDSLRA 143 (211)
T ss_pred ---CC-hhH---HHHHHHHHHHHHHhh--cCCeeEEEEcCccce-EEcCCceeec-CCCCchhHHHHHHHHHHHHHHHhh
Confidence 11 111 224446778888888 789999999887763 2222211221 11222345 34444444444444
Q ss_pred hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC-CCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEe
Q 020476 179 VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVING 250 (325)
Q Consensus 179 ~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~ 250 (325)
+ ..++||.+-|+..|-|+...- ++ ..++ .+......-+.|+..|.|-+++.-++++.. +..|.+
T Consensus 144 ~-~~l~WTfvSPaa~f~PGerTg-~y------rlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~h~rqRftv 209 (211)
T COG2910 144 E-KSLDWTFVSPAAFFEPGERTG-NY------RLGGDQLLVNAKGESRISYADYAIAVLDELEKPQHIRQRFTV 209 (211)
T ss_pred c-cCcceEEeCcHHhcCCccccC-ce------EeccceEEEcCCCceeeeHHHHHHHHHHHHhcccccceeeee
Confidence 4 469999999999999964321 11 1111 121112223689999999999999999873 335544
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=144.30 Aligned_cols=219 Identities=17% Similarity=0.095 Sum_probs=146.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA 94 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a 94 (325)
+..++++||||+|+||.++++.|+++|++|++++|+.++......... .....+|+.+.+.+.++++ ++|+|||+|
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~a 85 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETG-CEPLRLDVGDDAAIRAALAAAGAFDGLVNCA 85 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC-CeEEEecCCCHHHHHHHHHHhCCCCEEEECC
Confidence 345799999999999999999999999999999998755433221110 1144578888888777765 589999999
Q ss_pred CCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 95 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
|.... .+...+.....++.|+.++.++++++.+.. . ..+++|++||... +... +....| .+|
T Consensus 86 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~y~~sK 154 (245)
T PRK07060 86 GIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAA--LVGL---------PDHLAYCASK 154 (245)
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHH--cCCC---------CCCcHhHHHH
Confidence 97432 123445677788899999999988776420 1 1368999999765 3211 123457 677
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
...+...+.+..+ .+++++.+||+.++++... .+............ .....+++++|+++++..+++.+.
T Consensus 155 ~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~d~a~~~~~l~~~~~ 228 (245)
T PRK07060 155 AALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAA------IPLGRFAEVDDVAAPILFLLSDAA 228 (245)
T ss_pred HHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhc------CCCCCCCCHHHHHHHHHHHcCccc
Confidence 7777666555443 4899999999999987521 11111101111111 112348999999999999997654
Q ss_pred --C-CceEEeeCCC
Q 020476 244 --Y-RGVINGTAPN 254 (325)
Q Consensus 244 --~-~~~~~~~~~~ 254 (325)
. +..+++.+|.
T Consensus 229 ~~~~G~~~~~~~g~ 242 (245)
T PRK07060 229 SMVSGVSLPVDGGY 242 (245)
T ss_pred CCccCcEEeECCCc
Confidence 2 3477776653
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=4.1e-18 Score=143.19 Aligned_cols=220 Identities=18% Similarity=0.089 Sum_probs=141.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++++||||+|+||.+++++|+++|++|++++|++.+....... .....+..+|+.|++++.++++ ++|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 356999999999999999999999999999999987553322111 0111245689999998877664 579
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||+|+.... .....+.....+++|+.++..+++.+.... .+.+++|++||... ++.. +...
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~ 152 (251)
T PRK07231 84 ILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAG--LRPR---------PGLG 152 (251)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--cCCC---------CCch
Confidence 99999986422 123456677889999988666665544210 45678999999876 4321 2234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHHHH--HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.| .+|...+.....+..+ .+++++.++|+.+.++....... ..+.. ..... .....+++++|+|.++
T Consensus 153 ~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~ 226 (251)
T PRK07231 153 WYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLAT------IPLGRLGTPEDIANAA 226 (251)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcC------CCCCCCcCHHHHHHHH
Confidence 56 5665555444443332 38999999999996653211100 00011 11111 1223478999999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
+.++..+. ..| .+.+.++..
T Consensus 227 ~~l~~~~~~~~~g~~~~~~gg~~ 249 (251)
T PRK07231 227 LFLASDEASWITGVTLVVDGGRC 249 (251)
T ss_pred HHHhCccccCCCCCeEEECCCcc
Confidence 99997653 335 566665543
|
|
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.6e-18 Score=150.49 Aligned_cols=244 Identities=20% Similarity=0.207 Sum_probs=165.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC---CeEEEEecCCCcccc---cCC----------------CCCccccCceeec--
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAEL---IFP----------------GKKTRFFPGVMIA-- 75 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~---~~~----------------~~~~~~~~~~d~~-- 75 (325)
.++|+|||||||+|+.++++|++.- .+++.+.|.+..... +.. .........+|+.
T Consensus 12 ~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~pi~GDi~~~ 91 (467)
T KOG1221|consen 12 NKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVVPIAGDISEP 91 (467)
T ss_pred CCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecceeccccccCc
Confidence 3689999999999999999999863 388999987643211 100 0001112234555
Q ss_pred ----CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC--C
Q 020476 76 ----EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--S 149 (325)
Q Consensus 76 ----d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~--~ 149 (325)
+..++..+.+++|+|||+|+-. .+. +..+....+|..|+.++++.|+++ ...+-++++||+.+. ... .
T Consensus 92 ~LGis~~D~~~l~~eV~ivih~AAtv---rFd-e~l~~al~iNt~Gt~~~l~lak~~-~~l~~~vhVSTAy~n-~~~~~i 165 (467)
T KOG1221|consen 92 DLGISESDLRTLADEVNIVIHSAATV---RFD-EPLDVALGINTRGTRNVLQLAKEM-VKLKALVHVSTAYSN-CNVGHI 165 (467)
T ss_pred ccCCChHHHHHHHhcCCEEEEeeeee---ccc-hhhhhhhhhhhHhHHHHHHHHHHh-hhhheEEEeehhhee-cccccc
Confidence 3335556778999999999853 333 345667789999999999999987 677899999999873 110 0
Q ss_pred CCceec--C------------CC---------C-----CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc
Q 020476 150 ETEVFD--E------------SS---------P-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA 200 (325)
Q Consensus 150 ~~~~~~--e------------~~---------~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~ 200 (325)
.+.++. + +- + ..+.| +.|...|....... .++|++|+||+.|......+
T Consensus 166 ~E~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~--~~lPivIiRPsiI~st~~EP 243 (467)
T KOG1221|consen 166 EEKPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEA--ENLPLVIIRPSIITSTYKEP 243 (467)
T ss_pred cccccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhc--cCCCeEEEcCCceeccccCC
Confidence 111111 1 00 0 12335 67766666555443 57999999999999987666
Q ss_pred ccchHHHHHHHcCCC-----------CCCCcceeeeccHHHHHHHHHHHHc--CCC----CCceEEeeCCC--CCCHHHH
Q 020476 201 LAKMIPLFMMFAGGP-----------LGSGQQWFSWIHLDDIVNLIYEALS--NPS----YRGVINGTAPN--PVRLAEM 261 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~-----------~~~~~~~~~~v~v~D~a~a~~~~~~--~~~----~~~~~~~~~~~--~~s~~e~ 261 (325)
+..|+.......+-. ..+.+...+++.+|.++++++.+.- ... ...+||+++++ +++|.++
T Consensus 244 ~pGWidn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~ 323 (467)
T KOG1221|consen 244 FPGWIDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDF 323 (467)
T ss_pred CCCccccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHH
Confidence 666665443222211 1677888999999999999997661 111 13499999864 8999999
Q ss_pred HHHHHHHhCC
Q 020476 262 CDHLGNVLGR 271 (325)
Q Consensus 262 ~~~i~~~~g~ 271 (325)
.+...+.+..
T Consensus 324 ~e~~~~~~~~ 333 (467)
T KOG1221|consen 324 IELALRYFEK 333 (467)
T ss_pred HHHHHHhccc
Confidence 9999999864
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.4e-18 Score=144.66 Aligned_cols=217 Identities=13% Similarity=0.068 Sum_probs=142.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++++||||+|+||++++++|+++|++|+++.|+.+........ ........+|+.|++++.++++ ++|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 456899999999999999999999999999999986543221110 1111244678889888877654 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+++.... .....+.....+++|+.++.++.+++ ++ .+.++++++||.... ++. +..
T Consensus 84 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~ii~~sS~~~~-~~~----------~~~ 150 (252)
T PRK06138 84 VLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQR--QGGGSIVNTASQLAL-AGG----------RGR 150 (252)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHh--cCCeEEEEECChhhc-cCC----------CCc
Confidence 99999997532 22345566778899999986665544 45 456789999997651 331 123
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cch--HHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM--IPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~--~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+.| .+|...+.....+..+ .+++++++||+.++++..... ... .... ..... ......+++++|+++
T Consensus 151 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~d~a~ 225 (252)
T PRK06138 151 AAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRA-----RHPMNRFGTAEEVAQ 225 (252)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHh-----cCCCCCCcCHHHHHH
Confidence 457 6776666665555443 389999999999988742111 000 0000 00100 111123789999999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+++.++..+. ..| .+.+.++
T Consensus 226 ~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 226 AALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHHHcCchhcCccCCEEEECCC
Confidence 9999998754 235 5555544
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.2e-17 Score=140.03 Aligned_cols=216 Identities=13% Similarity=0.045 Sum_probs=142.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-Cccccc----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||.+++++|+++|++|+++.++. ...... ........+..+|+.|.+.+.++++ .+
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999998765543 221111 1111111245688889888877665 37
Q ss_pred CEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||+||..... ....+...+.+++|+.++..+++++.... .+.+++|++||.... ++. +...
T Consensus 86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~ 154 (247)
T PRK12935 86 DILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQ-AGG----------FGQT 154 (247)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhc-CCC----------CCCc
Confidence 9999999975332 22346778889999999999888876320 234689999987541 221 2234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+..+ .++++++++|+.+.++...... .... .... ....+.+.+++|++++++.
T Consensus 155 ~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~--~~~~------~~~~~~~~~~edva~~~~~ 226 (247)
T PRK12935 155 NYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQ--KIVA------KIPKKRFGQADEIAKGVVY 226 (247)
T ss_pred chHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHH--HHHH------hCCCCCCcCHHHHHHHHHH
Confidence 67 6676555544443332 4899999999998765321111 0010 1111 1123468999999999999
Q ss_pred HHcCCC--CCceEEeeCCC
Q 020476 238 ALSNPS--YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~ 254 (325)
+++... .+.+||+.++.
T Consensus 227 ~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 227 LCRDGAYITGQQLNINGGL 245 (247)
T ss_pred HcCcccCccCCEEEeCCCc
Confidence 997653 44599998874
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-18 Score=143.27 Aligned_cols=233 Identities=11% Similarity=0.010 Sum_probs=147.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|
T Consensus 6 ~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 85 (275)
T PRK05876 6 GRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHVD 85 (275)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4579999999999999999999999999999998654332211 11111234679999888877654 479
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||+||.... .....+.....+++|+.++.++++++... ..+ .+++|++||... +.. .+...
T Consensus 86 ~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~--~~~---------~~~~~ 154 (275)
T PRK05876 86 VVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAG--LVP---------NAGLG 154 (275)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhh--ccC---------CCCCc
Confidence 99999997432 23345667788899999999888876421 022 468999999865 421 12345
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcC---CCCCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAG---GPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.| .+|.......+.+.. ..++++++++|+.+.++.......... ...... ...+.....+++++++|+|+++
T Consensus 155 ~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 233 (275)
T PRK05876 155 AYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRG-AACAQSSTTGSPGPLPLQDDNLGVDDIAQLT 233 (275)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcC-ccccccccccccccccccccCCCHHHHHHHH
Confidence 67 666653333333222 248999999999988764221111000 000000 0112233456789999999999
Q ss_pred HHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHh
Q 020476 236 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVL 269 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~ 269 (325)
+.++.++. .|.+. .+.....+.+...+..
T Consensus 234 ~~ai~~~~---~~~~~--~~~~~~~~~~~~~~~~ 262 (275)
T PRK05876 234 ADAILANR---LYVLP--HAASRASIRRRFERID 262 (275)
T ss_pred HHHHHcCC---eEEec--ChhhHHHHHHHHHHHH
Confidence 99997653 34343 2345555555555544
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.9e-18 Score=145.88 Aligned_cols=220 Identities=14% Similarity=0.137 Sum_probs=144.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++|+||||+|+||++++++|+++|++|++++|++......... .....+..+|+.|.+.+.++++ ++
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 357999999999999999999999999999999987543222110 0011245688888887766553 58
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||+||.... .....+.+...+++|+.++..+++++.... ...+++|++||... +.. .+..+
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~--~~~---------~~~~~ 152 (258)
T PRK07890 84 DALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVL--RHS---------QPKYG 152 (258)
T ss_pred cEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhh--ccC---------CCCcc
Confidence 999999986422 133456778889999999999998886420 12358999998765 221 12345
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cch--------HHHHHHHcCCCCCCCcceeeeccHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM--------IPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.| .+|...+.....+..+ .++++++++|+.++++..... ... -...... ........+.+++
T Consensus 153 ~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 227 (258)
T PRK07890 153 AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAET-----AANSDLKRLPTDD 227 (258)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHH-----hhcCCccccCCHH
Confidence 67 6777766666655543 489999999999999852110 000 0001000 0111122467899
Q ss_pred HHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 230 DIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
|++++++.+++... ..| ++.+.++.
T Consensus 228 dva~a~~~l~~~~~~~~~G~~i~~~gg~ 255 (258)
T PRK07890 228 EVASAVLFLASDLARAITGQTLDVNCGE 255 (258)
T ss_pred HHHHHHHHHcCHhhhCccCcEEEeCCcc
Confidence 99999999887532 233 55555553
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=140.21 Aligned_cols=216 Identities=15% Similarity=0.049 Sum_probs=141.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++|||||+|+||++++++|++.|++|++++|+.+....... ......+..+|+.|.+++.++++ ++|
T Consensus 3 ~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~d 82 (250)
T TIGR03206 3 DKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPVD 82 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998754322111 00011244678888888777654 589
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+++..... ....+.....+++|+.++.++++++. + .+.+++|++||... +.... ..
T Consensus 83 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~ii~iss~~~--~~~~~---------~~ 149 (250)
T TIGR03206 83 VLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVE--RGAGRIVNIASDAA--RVGSS---------GE 149 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCeEEEEECchhh--ccCCC---------CC
Confidence 999999864221 22344556789999999998877764 4 45678999999876 43221 23
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc----chHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA----KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..| .+|...+.....+..+ .+++++++||+.++++...... .-.... ......+ ...+...+|+|
T Consensus 150 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva 223 (250)
T TIGR03206 150 AVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIP------LGRLGQPDDLP 223 (250)
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCC------ccCCcCHHHHH
Confidence 457 6665555444444333 3899999999999887321110 000011 1111111 12256789999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++..++..+. .+.++++.++.
T Consensus 224 ~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (250)
T TIGR03206 224 GAILFFSSDDASFITGQVLSVSGGL 248 (250)
T ss_pred HHHHHHcCcccCCCcCcEEEeCCCc
Confidence 99999987653 33488887664
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=139.52 Aligned_cols=220 Identities=14% Similarity=-0.042 Sum_probs=142.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|+.... .... .....+|+.+.+.+.++++ .+|+||
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~~~~--~~~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAFLTQ--EDYP---FATFVLDVSDAAAVAQVCQRLLAETGPLDVLV 81 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecchhhh--cCCc---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 346899999999999999999999999999999976111 0011 1144679999888877664 479999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||++.... .....+.....+++|+.++..+++++... ..+.+++|++||... ... .+....| .
T Consensus 82 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~~~~~Y~~ 150 (252)
T PRK08220 82 NAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAA--HVP---------RIGMAAYGA 150 (252)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchh--ccC---------CCCCchhHH
Confidence 99997532 22345667888999999988888876421 034468999998765 211 1123456 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHc--CCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFA--GGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
+|...+.....+..+ .++++++++|+.++++............ .... ............+++++|+|++++.++
T Consensus 151 sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 230 (252)
T PRK08220 151 SKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIARPQEIANAVLFLA 230 (252)
T ss_pred HHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccCCHHHHHHHHHHHh
Confidence 676666655555543 5899999999999988432110000000 0000 000011122345899999999999999
Q ss_pred cCCC---CCceEEeeCCC
Q 020476 240 SNPS---YRGVINGTAPN 254 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~ 254 (325)
.... .+.++.+.+|.
T Consensus 231 ~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 231 SDLASHITLQDIVVDGGA 248 (252)
T ss_pred cchhcCccCcEEEECCCe
Confidence 7542 33356666553
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-17 Score=137.25 Aligned_cols=213 Identities=15% Similarity=0.105 Sum_probs=140.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc----c----CCCCCccccCceeecCCchhHhhhC------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+|+|+||||+|+||++++++|+++|++|++++|....... . ........+..+|+.|.+.+.++++
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4799999999999999999999999999998774322111 0 0000111244678888888776653
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHh-----cCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+|||+||.... .....+.....+++|+.++.++++++. + .+.+++|++||... +...
T Consensus 86 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~~------- 154 (249)
T PRK12827 86 GRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRA--RRGGRIVNIASVAG--VRGN------- 154 (249)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhc--CCCeEEEEECCchh--cCCC-------
Confidence 68999999997542 233455677788999999999999887 4 45678999999766 3211
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .+++++++||+.+.++..... .+........+. ..+.+.+|++
T Consensus 155 --~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~~~~~~~~~~~~------~~~~~~~~va 223 (249)
T PRK12827 155 --RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNA---APTEHLLNPVPV------QRLGEPDEVA 223 (249)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCccccc---chHHHHHhhCCC------cCCcCHHHHH
Confidence 123456 6666555444444332 489999999999998753211 111111111111 1245889999
Q ss_pred HHHHHHHcCCC--C-CceEEeeCCC
Q 020476 233 NLIYEALSNPS--Y-RGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~--~-~~~~~~~~~~ 254 (325)
+++..++.... . +..+++.++.
T Consensus 224 ~~~~~l~~~~~~~~~g~~~~~~~g~ 248 (249)
T PRK12827 224 ALVAFLVSDAASYVTGQVIPVDGGF 248 (249)
T ss_pred HHHHHHcCcccCCccCcEEEeCCCC
Confidence 99999886543 2 3377776653
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=140.28 Aligned_cols=220 Identities=13% Similarity=0.026 Sum_probs=141.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||+++++.|++.|++|+++ .|+..+..... .......+..+|+.|++++.++++ ++
T Consensus 4 ~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (250)
T PRK08063 4 GKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGRL 83 (250)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999999999999999999998764 66654322211 111111234588889988777664 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||+||.... .+...+.....+.+|+.++..+++++... ..+.+++|++||... +.. .+...
T Consensus 84 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~ 152 (250)
T PRK08063 84 DVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGS--IRY---------LENYT 152 (250)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhh--ccC---------CCCcc
Confidence 999999986422 22234455667889999988887777542 134569999999755 221 12234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+ .+++++.++|+.+..+.................. .....+++.+|+|++++.+
T Consensus 153 ~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dva~~~~~~ 227 (250)
T PRK08063 153 TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAK-----TPAGRMVEPEDVANAVLFL 227 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcC-----CCCCCCcCHHHHHHHHHHH
Confidence 56 6777666665554433 5899999999999876422111111111111111 1112378999999999999
Q ss_pred HcCCC---CCceEEeeCCCC
Q 020476 239 LSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~ 255 (325)
+.++. .+..+++.++..
T Consensus 228 ~~~~~~~~~g~~~~~~gg~~ 247 (250)
T PRK08063 228 CSPEADMIRGQTIIVDGGRS 247 (250)
T ss_pred cCchhcCccCCEEEECCCee
Confidence 97653 244777777654
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.1e-17 Score=139.38 Aligned_cols=212 Identities=13% Similarity=0.099 Sum_probs=141.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
+++|+||||+|+||++++++|+++|++|++++|++.+...... ..+..+|+.|++++.++++ .+|+|||
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~----~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPIPG----VELLELDVTDDASVQAAVDEVIARAGRIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccccCC----CeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 3589999999999999999999999999999998755432211 1255789999998887775 4799999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
|||.... .....+.....+++|+.++.++++++ ++ .+.+++|++||... +.. .+....|
T Consensus 80 ~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~~Y~ 146 (270)
T PRK06179 80 NAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRA--QGSGRIINISSVLG--FLP---------APYMALYA 146 (270)
T ss_pred CCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEECCccc--cCC---------CCCccHHH
Confidence 9997532 22345567888999999988887764 55 56789999999765 321 1223456
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc---chHHHH---HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA---KMIPLF---MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~---~~~~~~---~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.+|...+.....+.. ..|+++++++|+.+.++...... ...... .......+. .........+|+|+.+
T Consensus 147 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~va~~~ 224 (270)
T PRK06179 147 ASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVA--KAVKKADAPEVVADTV 224 (270)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHH--hccccCCCHHHHHHHH
Confidence 667666655444433 35999999999999876421110 000000 000000000 0111246789999999
Q ss_pred HHHHcCCCCCceEEe
Q 020476 236 YEALSNPSYRGVING 250 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~ 250 (325)
+.++..+.....|..
T Consensus 225 ~~~~~~~~~~~~~~~ 239 (270)
T PRK06179 225 VKAALGPWPKMRYTA 239 (270)
T ss_pred HHHHcCCCCCeeEec
Confidence 999987654445533
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.9e-17 Score=133.90 Aligned_cols=208 Identities=18% Similarity=0.120 Sum_probs=138.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC------CCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~------~~d~vi~~ 93 (325)
.|+|+||||+|+||.+++++|+++|++|++++|+..+.. .. .+..+|+.|.+++.++++ ++|+|||+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~~--~~-----~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDDF--PG-----ELFACDLADIEQTAATLAQINEIHPVDAIVNN 75 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccccc--Cc-----eEEEeeCCCHHHHHHHHHHHHHhCCCcEEEEC
Confidence 468999999999999999999999999999999875521 11 145689999888776664 68999999
Q ss_pred CCCCCCCC---CChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 94 AGTPIGTR---WSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 94 a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||...... ...+.....+++|+.++.++.++ +++ .+.+++|++||... |+.. ....| .
T Consensus 76 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~~sS~~~--~~~~----------~~~~Y~~ 141 (234)
T PRK07577 76 VGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKL--REQGRIVNICSRAI--FGAL----------DRTSYSA 141 (234)
T ss_pred CCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEccccc--cCCC----------CchHHHH
Confidence 99753322 23456667888999887666554 444 45679999999875 5532 23456 6
Q ss_pred HHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+.....+.. ..+++++++|||.+..+............ ......+. ......+|++.+++.++.
T Consensus 142 sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~a~~~~~l~~ 215 (234)
T PRK07577 142 AKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPM------RRLGTPEEVAAAIAFLLS 215 (234)
T ss_pred HHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCC------CCCcCHHHHHHHHHHHhC
Confidence 67665544444332 24899999999998876421110000000 11111111 124578999999999997
Q ss_pred CCC--CCc-eEEeeCCC
Q 020476 241 NPS--YRG-VINGTAPN 254 (325)
Q Consensus 241 ~~~--~~~-~~~~~~~~ 254 (325)
.+. ..| .+.+.++.
T Consensus 216 ~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 216 DDAGFITGQVLGVDGGG 232 (234)
T ss_pred cccCCccceEEEecCCc
Confidence 653 334 66666554
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=141.69 Aligned_cols=215 Identities=16% Similarity=0.119 Sum_probs=138.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--------~~d~vi 91 (325)
+++++||||+|+||.++++.|+++|++|++++|+++....+.... .....+|+.|.+++.++++ ++|+||
T Consensus 4 ~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~--~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 4 KRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEG--LEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCC--ceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 468999999999999999999999999999999876544332211 1144679888887765543 479999
Q ss_pred ECCCCCCCC---CCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIGT---RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~~---~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||..... +...+.....+++|+.+ ++.+++.+++ .+.+++|++||... +.. .+....|
T Consensus 82 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y 148 (277)
T PRK05993 82 NNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRK--QGQGRIVQCSSILG--LVP---------MKYRGAY 148 (277)
T ss_pred ECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhh--cCCCEEEEECChhh--cCC---------CCccchH
Confidence 999865332 23345567788999988 6677777777 56789999999754 221 1234567
Q ss_pred -HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCC-----------CC-CCCcceeeecc
Q 020476 165 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGG-----------PL-GSGQQWFSWIH 227 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~-----------~~-~~~~~~~~~v~ 227 (325)
.+|...+.....+.. ..|+++++++||.+-.+..... ..+...... ... .+ .........+.
T Consensus 149 ~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T PRK05993 149 NASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDI-ENSVHRAAYQQQMARLEGGGSKSRFKLG 227 (277)
T ss_pred HHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhcc-ccchhHHHHHHHHHHHHhhhhccccCCC
Confidence 677777665554432 3589999999998876521110 000000000 000 00 00000111367
Q ss_pred HHHHHHHHHHHHcCCCCCceEEe
Q 020476 228 LDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
.+++|+.++.+++.+.....|.+
T Consensus 228 ~~~va~~i~~a~~~~~~~~~~~~ 250 (277)
T PRK05993 228 PEAVYAVLLHALTAPRPRPHYRV 250 (277)
T ss_pred HHHHHHHHHHHHcCCCCCCeeee
Confidence 89999999999987653334543
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2e-17 Score=138.06 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=137.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC----CCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG----STAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~----~d~vi~~a~ 95 (325)
|++++||||+|+||.+++++|+++|++|++++|+++................+|+.|.+++.+++++ +|.++|+||
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag 80 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG 80 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence 3689999999999999999999999999999998755433322111112456899999988887753 689999998
Q ss_pred CCCCCC---CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHH
Q 020476 96 TPIGTR---WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE 171 (325)
Q Consensus 96 ~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~ 171 (325)
...... ...+..+..+++|+.++.++++++.......+++|++||.... ++. +....| .+|...+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~~Y~asK~a~~ 149 (240)
T PRK06101 81 DCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASE-LAL----------PRAEAYGASKAAVA 149 (240)
T ss_pred ccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhc-cCC----------CCCchhhHHHHHHH
Confidence 542212 3455567889999999999999887532233578888886531 221 223457 6777666
Q ss_pred HHHHHHh---hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 172 WEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 172 ~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.....+. ...+++++++|||+++++..... .... -..+..+|+++.++..++.+.
T Consensus 150 ~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~-------------~~~~----~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 150 YFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN-------------TFAM----PMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred HHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC-------------CCCC----CcccCHHHHHHHHHHHHhcCC
Confidence 6655444 23589999999999988742211 0000 014789999999999998753
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.6e-17 Score=138.94 Aligned_cols=220 Identities=12% Similarity=0.027 Sum_probs=145.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
...|++|||||+|+||.++++.|+++|++|++++|+.... ... ........+..+|+.|.+.+.++++
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~ 123 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG 123 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3457899999999999999999999999999999875431 111 0101111234678888887776653
Q ss_pred CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++|+|||+|+.... .+...+.....+++|+.++.++++++........++|++||... +.... ..
T Consensus 124 ~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~--~~~~~---------~~ 192 (290)
T PRK06701 124 RLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG--YEGNE---------TL 192 (290)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc--cCCCC---------Cc
Confidence 58999999996422 22344567788999999999999988752112368999999876 43221 22
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .+++++.++||.++.+...... .-...... ........+.+++|+|++++.
T Consensus 193 ~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~dva~~~~~ 266 (290)
T PRK06701 193 IDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDF-DEEKVSQF-----GSNTPMQRPGQPEELAPAYVF 266 (290)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCccccccc-CHHHHHHH-----HhcCCcCCCcCHHHHHHHHHH
Confidence 456 6776666655555554 4899999999999887321110 00111111 111122347899999999999
Q ss_pred HHcCCC--CCc-eEEeeCCC
Q 020476 238 ALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~~ 254 (325)
++.+.. ..| ++++.++.
T Consensus 267 ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 267 LASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HcCcccCCccCcEEEeCCCc
Confidence 998653 234 77777664
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.2e-17 Score=143.29 Aligned_cols=215 Identities=11% Similarity=-0.045 Sum_probs=142.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++|||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999997654322211 01111134678889888877765 479
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCC------CCEEEEeeeeeeeecCCCCceec
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDL----INESPEGV------RPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~------~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
+|||+||..... ....+.+...+++|+.++.+++++ +.+ ... +++|++||... +...
T Consensus 86 ~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~~~~~g~iv~~sS~~~--~~~~------ 155 (287)
T PRK06194 86 LLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLA--AAEKDPAYEGHIVNTASMAG--LLAP------ 155 (287)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCCCCCCeEEEEeCChhh--ccCC------
Confidence 999999975432 234566777899999998887666 343 222 58999999866 3321
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhcC-----CceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeec
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVNK-----DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWI 226 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~~-----~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v 226 (325)
+....| .+|...+.....+..+. ++++..+.|+.+..+-. ....+.+ .+++.+.++++
T Consensus 156 ---~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~----------~~~~~~~~~~~~~~~~~~~~~ 222 (287)
T PRK06194 156 ---PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIW----------QSERNRPADLANTAPPTRSQL 222 (287)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccc----------cccccCchhcccCccccchhh
Confidence 234567 77777766665554432 46677777766544311 0111112 24556777888
Q ss_pred cHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCC
Q 020476 227 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
+++|.+.++.... .++..|+++.+.+.+...
T Consensus 223 ~~~~~~~~~~~~~---------------~~s~~dva~~i~~~~~~~ 253 (287)
T PRK06194 223 IAQAMSQKAVGSG---------------KVTAEEVAQLVFDAIRAG 253 (287)
T ss_pred HHHHHHHhhhhcc---------------CCCHHHHHHHHHHHHHcC
Confidence 8888877653221 168888888888876543
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.3e-17 Score=136.10 Aligned_cols=217 Identities=15% Similarity=0.115 Sum_probs=137.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||+++++.|+++|++|+++.|+..+. .. ............+|+.+.+.+.++++ +
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 347999999999999999999999999998888876431 11 11111111134568888887766554 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+|||+||.... .....+.....+.+|+.++.++++++... ..+.++++++||... .++.. ..
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~-~~~~~----------~~ 152 (248)
T PRK05557 84 VDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVG-LMGNP----------GQ 152 (248)
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEccccc-CcCCC----------CC
Confidence 8999999986432 22344566778889999998888877642 134568999998743 14421 23
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+.. ..++++++++|+.+.++...... .... ......+ ...+.+.+|+++++.
T Consensus 153 ~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~va~~~~ 224 (248)
T PRK05557 153 ANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKE--AILAQIP------LGRLGQPEEIASAVA 224 (248)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHH--HHHhcCC------CCCCcCHHHHHHHHH
Confidence 446 555544433332222 24899999999988655322211 1111 1111111 123678999999999
Q ss_pred HHHcCC--CCC-ceEEeeCCC
Q 020476 237 EALSNP--SYR-GVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~--~~~-~~~~~~~~~ 254 (325)
.++... ... .+|++.++.
T Consensus 225 ~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 225 FLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred HHcCcccCCccccEEEecCCc
Confidence 888652 233 488888764
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=5.7e-17 Score=136.95 Aligned_cols=216 Identities=17% Similarity=0.119 Sum_probs=142.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-------CCCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-------~~~d~vi 91 (325)
..++++||||+|.||+++++.|+++|++|++++|+...... .. ..+..+|+.|.+.+.+++ .++|+||
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~---~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDLP--EG---VEFVAADLTTAEGCAAVARAVLERLGGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhcC--Cc---eeEEecCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34789999999999999999999999999999998654211 11 114568999888776544 3689999
Q ss_pred ECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 92 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 92 ~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+||.... .....+.+...+++|+.++..+.++ +++ .+.+++|++||... +... .+...
T Consensus 83 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~ii~isS~~~--~~~~--------~~~~~ 150 (260)
T PRK06523 83 HVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIA--RGSGVIIHVTSIQR--RLPL--------PESTT 150 (260)
T ss_pred ECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--cCCcEEEEEecccc--cCCC--------CCCcc
Confidence 99985321 2235567788899999988766544 444 44568999999765 3211 01234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cch-----------HHHH-HHHcCCCCCCCcceeee
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM-----------IPLF-MMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~-----------~~~~-~~~~~~~~~~~~~~~~~ 225 (325)
.| .+|...+.....+..+ .++++.+++||.+.++..... ..+ ...+ ....+.|+ ..+
T Consensus 151 ~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~ 224 (260)
T PRK06523 151 AYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGIPL------GRP 224 (260)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccCcc------CCC
Confidence 57 6777666555544433 489999999999988742110 000 0000 00111111 225
Q ss_pred ccHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 226 IHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
...+|+++++..++.+.. .+..+.+.++...|
T Consensus 225 ~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~~ 259 (260)
T PRK06523 225 AEPEEVAELIAFLASDRAASITGTEYVIDGGTVPT 259 (260)
T ss_pred CCHHHHHHHHHHHhCcccccccCceEEecCCccCC
Confidence 678999999999997543 34488888876554
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.5e-17 Score=139.45 Aligned_cols=202 Identities=17% Similarity=0.159 Sum_probs=133.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
|+|+||||+|+||.++++.|+++|++|++++|++++....... ........+|+.|.+++.++++ ++|+|||
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 6899999999999999999999999999999987643322111 0011244678888887766553 6999999
Q ss_pred CCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 93 LAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 93 ~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
+||.... .....+.....+++|+.++..+++. +++ .+.+++|++||... +.. .+....|
T Consensus 81 ~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~~Y 147 (248)
T PRK10538 81 NAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVE--RNHGHIINIGSTAG--SWP---------YAGGNVY 147 (248)
T ss_pred CCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEECCccc--CCC---------CCCCchh
Confidence 9986321 2334566788899999995555444 444 46678999999764 211 1123456
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.+|...+.....+..+ .++.+++++||.+.|+.... ......... ... . ...++..+|+|++++.+
T Consensus 148 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~----~~~-~---~~~~~~~~dvA~~~~~l 219 (248)
T PRK10538 148 GATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAE----KTY-Q---NTVALTPEDVSEAVWWV 219 (248)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHH----hhc-c---ccCCCCHHHHHHHHHHH
Confidence 6676666555554433 48999999999998664211 000000000 000 1 12357899999999999
Q ss_pred HcCCC
Q 020476 239 LSNPS 243 (325)
Q Consensus 239 ~~~~~ 243 (325)
+..+.
T Consensus 220 ~~~~~ 224 (248)
T PRK10538 220 ATLPA 224 (248)
T ss_pred hcCCC
Confidence 98764
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.1e-17 Score=130.72 Aligned_cols=205 Identities=15% Similarity=0.123 Sum_probs=141.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--ccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
|.++|||||+.||.++++.|.+.|++|++..|+.+....+..... .......|++|.+++.++++ ++|++|
T Consensus 7 kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDiLv 86 (246)
T COG4221 7 KVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDILV 86 (246)
T ss_pred cEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccEEE
Confidence 579999999999999999999999999999999987665544322 12244689999988655443 699999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|+||.... .....++++.++++|+.+..+...+ +.+ .+.+.+|.+||.+.. |. .|..+-|
T Consensus 87 NNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~--r~~G~IiN~~SiAG~-~~----------y~~~~vY 153 (246)
T COG4221 87 NNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVE--RKSGHIINLGSIAGR-YP----------YPGGAVY 153 (246)
T ss_pred ecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHh--cCCceEEEecccccc-cc----------CCCCccc
Confidence 99998644 3445778999999999997766554 444 456699999998752 22 2234557
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|..........+.+ .+++++.+-||.+-...-...+.--...+. ..-.....++..+|+|+++..+++
T Consensus 154 ~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g~~~~~------~~~y~~~~~l~p~dIA~~V~~~~~ 227 (246)
T COG4221 154 GATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEGDDERA------DKVYKGGTALTPEDIAEAVLFAAT 227 (246)
T ss_pred hhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCchhhhH------HHHhccCCCCCHHHHHHHHHHHHh
Confidence 5665554444444433 489999999998865421111000000000 000112357999999999999999
Q ss_pred CCCC
Q 020476 241 NPSY 244 (325)
Q Consensus 241 ~~~~ 244 (325)
.|..
T Consensus 228 ~P~~ 231 (246)
T COG4221 228 QPQH 231 (246)
T ss_pred CCCc
Confidence 9873
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.9e-17 Score=139.63 Aligned_cols=194 Identities=14% Similarity=0.107 Sum_probs=134.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
+|+|+||||+|+||.++++.|++.|++|++++|+.+......... .......+|+.|++++.++++ .+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 579999999999999999999999999999999865433221110 012245689999888877654 3799
Q ss_pred EEECCCCCCCCC----CChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 90 VVNLAGTPIGTR----WSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 90 vi~~a~~~~~~~----~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||+||...... ...+.....+++|+.++..+++ ++++ .+.+++|++||.... ++. +..
T Consensus 82 lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~--~~~~~iv~isS~~~~-~~~----------~~~ 148 (257)
T PRK07024 82 VIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRA--ARRGTLVGIASVAGV-RGL----------PGA 148 (257)
T ss_pred EEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHh--cCCCEEEEEechhhc-CCC----------CCC
Confidence 999999753211 3346678889999999888766 5555 456789999987651 221 223
Q ss_pred Cch-HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+. ...++++++++|+.+.++..... .... -..+..+++++.++.
T Consensus 149 ~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------------~~~~----~~~~~~~~~a~~~~~ 211 (257)
T PRK07024 149 GAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN-------------PYPM----PFLMDADRFAARAAR 211 (257)
T ss_pred cchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC-------------CCCC----CCccCHHHHHHHHHH
Confidence 457 67776666655443 23589999999999987632110 0000 013689999999999
Q ss_pred HHcCCC
Q 020476 238 ALSNPS 243 (325)
Q Consensus 238 ~~~~~~ 243 (325)
++.++.
T Consensus 212 ~l~~~~ 217 (257)
T PRK07024 212 AIARGR 217 (257)
T ss_pred HHhCCC
Confidence 998753
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.8e-17 Score=137.87 Aligned_cols=221 Identities=18% Similarity=0.146 Sum_probs=144.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-cccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
++|+++||||+|+||+++++.|++.|++|+++.|+.. ...... .......+..+|+.|.+++.++++ +
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3568999999999999999999999999988877532 211110 001111134678888888776654 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+||||||.... .....+.....+++|+.++..+++++.... ...+++|+++|... +.. .+..
T Consensus 88 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~--~~~---------~p~~ 156 (258)
T PRK09134 88 ITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRV--WNL---------NPDF 156 (258)
T ss_pred CCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhh--cCC---------CCCc
Confidence 7999999986422 233456678889999999999988776531 22356777776544 321 1122
Q ss_pred Cch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
..| .+|...+.....+..+. ++.++.++||.+..........+ .......+.+ ...+++|+|++++.+
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~~~~---~~~~~~~~~~------~~~~~~d~a~~~~~~ 227 (258)
T PRK09134 157 LSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSPEDF---ARQHAATPLG------RGSTPEEIAAAVRYL 227 (258)
T ss_pred hHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccChHHH---HHHHhcCCCC------CCcCHHHHHHHHHHH
Confidence 357 77877766666655432 48999999999876532111111 1111111221 247799999999999
Q ss_pred HcCCCCCc-eEEeeCCCCCCHH
Q 020476 239 LSNPSYRG-VINGTAPNPVRLA 259 (325)
Q Consensus 239 ~~~~~~~~-~~~~~~~~~~s~~ 259 (325)
++.+...| .|++.++..++|.
T Consensus 228 ~~~~~~~g~~~~i~gg~~~~~~ 249 (258)
T PRK09134 228 LDAPSVTGQMIAVDGGQHLAWL 249 (258)
T ss_pred hcCCCcCCCEEEECCCeecccc
Confidence 98776555 7888877655554
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-17 Score=138.94 Aligned_cols=218 Identities=16% Similarity=0.096 Sum_probs=139.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CC--CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG--KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~--~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.|+++||||+|+||+++++.|+++|++|++++|++++..... .. .....+..+|+.|++++.++++ .
T Consensus 4 ~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 83 (256)
T PRK09186 4 GKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYGK 83 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999999999999999999999875532211 00 0001133679999988877765 3
Q ss_pred CCEEEECCCCCCC------CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 87 STAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 87 ~d~vi~~a~~~~~------~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
+|+|||||+.... .....+.....+++|+.++..++ +.+++ .+.+++|++||... +..... ...+
T Consensus 84 id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~~~~-~~~~ 158 (256)
T PRK09186 84 IDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKK--QGGGNLVNISSIYG--VVAPKF-EIYE 158 (256)
T ss_pred ccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHh--cCCceEEEEechhh--hccccc-hhcc
Confidence 8999999974311 22344556777888887765554 44444 45679999999764 322111 1122
Q ss_pred CCCC--CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 157 SSPS--GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 157 ~~~~--~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
..+. ...| .+|...+.....+.. ..++++++++|+.++++.. ..+...+. ... ....+++++|
T Consensus 159 ~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~---~~~~~~~~---~~~-----~~~~~~~~~d 227 (256)
T PRK09186 159 GTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQP---EAFLNAYK---KCC-----NGKGMLDPDD 227 (256)
T ss_pred ccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCC---HHHHHHHH---hcC-----CccCCCCHHH
Confidence 2222 2247 667666666544444 3589999999998876532 11111111 110 1124789999
Q ss_pred HHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 231 IVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 231 ~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+|++++.++++.. ..| .+.+.+|
T Consensus 228 va~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 228 ICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred hhhhHhheeccccccccCceEEecCC
Confidence 9999999997643 335 5555555
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.9e-17 Score=138.55 Aligned_cols=210 Identities=14% Similarity=0.104 Sum_probs=132.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a 94 (325)
+++||||||+|+||+++++.|+++|++|++++|++........ .........+|+.|++.+.+++. ++|+|||||
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a 81 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA 81 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence 4689999999999999999999999999999997654322110 00011244579999999988876 899999999
Q ss_pred CCCCC---CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 95 GTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|.... .....+.....+++|+.++..+. +.+.+ .+.+++|++||... +.. .+....| .+
T Consensus 82 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~---------~~~~~~Y~~s 148 (257)
T PRK09291 82 GIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVA--RGKGKVVFTSSMAG--LIT---------GPFTGAYCAS 148 (257)
T ss_pred CcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEEcChhh--ccC---------CCCcchhHHH
Confidence 96532 22344556777888988766554 44455 45679999998754 211 1223456 66
Q ss_pred HHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcC-CCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 167 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAG-GPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 167 k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
|...+...+.+.. ..|++++++||+++..+..... ..+......... .+.............+|+++.++.++..
T Consensus 149 K~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 228 (257)
T PRK09291 149 KHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAMVEVIPA 228 (257)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHHHHHhcC
Confidence 7666655544433 3589999999998754321100 001100000000 0001112233457888888888888866
Q ss_pred C
Q 020476 242 P 242 (325)
Q Consensus 242 ~ 242 (325)
+
T Consensus 229 ~ 229 (257)
T PRK09291 229 D 229 (257)
T ss_pred C
Confidence 4
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=6.1e-17 Score=136.37 Aligned_cols=220 Identities=15% Similarity=0.024 Sum_probs=143.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++++||||+|+||.++++.|+++|++|++++|+.......... ........+|+.+.+++.++++ ++|+
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3456899999999999999999999999999999976532111110 0001134578888887776653 5799
Q ss_pred EEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||+||..... ....+.....+++|+.++.++++++... ..+.+++|++||.... ++. +....|
T Consensus 93 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y 161 (255)
T PRK06841 93 LVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGV-VAL----------ERHVAY 161 (255)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhc-cCC----------CCCchH
Confidence 99999975321 2334566778999999999988887531 0345789999997641 331 123457
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+ .++++..++||.+..+.......-..........+ ...+.+.+|++++++.+++
T Consensus 162 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~~l~~ 235 (255)
T PRK06841 162 CASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIP------AGRFAYPEEIAAAALFLAS 235 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCC------CCCCcCHHHHHHHHHHHcC
Confidence 6676665555544443 48999999999998764211100000011111111 2347899999999999997
Q ss_pred CCC--CCc-eEEeeCCC
Q 020476 241 NPS--YRG-VINGTAPN 254 (325)
Q Consensus 241 ~~~--~~~-~~~~~~~~ 254 (325)
.+. ..| ++.+.++.
T Consensus 236 ~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 236 DAAAMITGENLVIDGGY 252 (255)
T ss_pred ccccCccCCEEEECCCc
Confidence 643 234 66776664
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.8e-17 Score=139.85 Aligned_cols=197 Identities=15% Similarity=0.068 Sum_probs=132.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
++.++|+||||+|.||+++++.|+++|++|++++|+++.............+..+|+.|++++.++++ ++|++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34579999999999999999999999999999999876543221110011245689999887765543 57999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
||+||.... .....+.....+++|+.++..+++++ .+ .+.+++|++||... +.. .+....
T Consensus 83 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~ 149 (273)
T PRK07825 83 VNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVP--RGRGHVVNVASLAG--KIP---------VPGMAT 149 (273)
T ss_pred EECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEcCccc--cCC---------CCCCcc
Confidence 999997432 22344566778899998877765554 44 46678999999865 221 123445
Q ss_pred h-HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+....... ...|+++++++|+.+..+..... + ......+++.+|+|++++.++
T Consensus 150 Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~-------------~---~~~~~~~~~~~~va~~~~~~l 213 (273)
T PRK07825 150 YCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT-------------G---GAKGFKNVEPEDVAAAIVGTV 213 (273)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc-------------c---cccCCCCCCHHHHHHHHHHHH
Confidence 6 56654433322222 23589999999998765421100 0 011234789999999999999
Q ss_pred cCCC
Q 020476 240 SNPS 243 (325)
Q Consensus 240 ~~~~ 243 (325)
.++.
T Consensus 214 ~~~~ 217 (273)
T PRK07825 214 AKPR 217 (273)
T ss_pred hCCC
Confidence 8764
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=8e-17 Score=139.79 Aligned_cols=224 Identities=14% Similarity=0.037 Sum_probs=137.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
...++|+||||+|+||.+++++|+++|++|++++|+.++............+..+|+.|.+++.++++ ++|+|
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 103 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDIL 103 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 34578999999999999999999999999999999876543221111011245689999888776653 68999
Q ss_pred EECCCCCCC-CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC--CCCc
Q 020476 91 VNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGND 163 (325)
Q Consensus 91 i~~a~~~~~-~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~--~~~~ 163 (325)
||+||.... .....+..+..+++|+.++..+. ..+++ .+..++|++||.+.. ++...........+ ....
T Consensus 104 i~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~-~~~~~~~~~~~~~~~~~~~~ 180 (315)
T PRK06196 104 INNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA--GAGARVVALSSAGHR-RSPIRWDDPHFTRGYDKWLA 180 (315)
T ss_pred EECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCeEEEECCHHhc-cCCCCccccCccCCCChHHH
Confidence 999996422 22234456778899999855544 45555 445789999997541 11110000010111 2234
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHH-HHHHc--CCCCCCCcceeeeccHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPL-FMMFA--GGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
| .+|...+.....+.. ..|+++++++||.+.++........... ..... +.++. ..+...+|.|.+++
T Consensus 181 Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~a~~~~ 255 (315)
T PRK06196 181 YGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPID-----PGFKTPAQGAATQV 255 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhh-----hhcCCHhHHHHHHH
Confidence 6 677766655544433 3489999999999998743221110000 00000 00110 02467899999999
Q ss_pred HHHcCCC---CCceEE
Q 020476 237 EALSNPS---YRGVIN 249 (325)
Q Consensus 237 ~~~~~~~---~~~~~~ 249 (325)
.++..+. .+|.|.
T Consensus 256 ~l~~~~~~~~~~g~~~ 271 (315)
T PRK06196 256 WAATSPQLAGMGGLYC 271 (315)
T ss_pred HHhcCCccCCCCCeEe
Confidence 9997654 344553
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.7e-17 Score=134.86 Aligned_cols=217 Identities=13% Similarity=0.054 Sum_probs=141.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
..++|+||||+|+||.+++++|+++|++|++++|+.... ..............+|+.+.+++.++++ ++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457999999999999999999999999999999975221 1111111111244578888888775543 5899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||+||.... .....+.++..+++|+.++..+++++... ..+ .+++|++||... +... +..+.
T Consensus 84 li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~~~ 152 (248)
T TIGR01832 84 LVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLS--FQGG---------IRVPS 152 (248)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHh--ccCC---------CCCch
Confidence 9999997532 22334567788999999998888877531 022 468999999866 4322 12346
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+..+ .+++++.++||.+..+.......-.... ..... .....++..+|+|++++.+
T Consensus 153 Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~~~~~l 226 (248)
T TIGR01832 153 YTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILER------IPAGRWGTPDDIGGPAVFL 226 (248)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhc------CCCCCCcCHHHHHHHHHHH
Confidence 7 7777776666665554 4899999999999877421110000000 11111 1123589999999999999
Q ss_pred HcCCC--CCceEEeeC
Q 020476 239 LSNPS--YRGVINGTA 252 (325)
Q Consensus 239 ~~~~~--~~~~~~~~~ 252 (325)
++... ..|.+...+
T Consensus 227 ~s~~~~~~~G~~i~~d 242 (248)
T TIGR01832 227 ASSASDYVNGYTLAVD 242 (248)
T ss_pred cCccccCcCCcEEEeC
Confidence 97543 345443333
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.9e-17 Score=138.90 Aligned_cols=223 Identities=13% Similarity=0.025 Sum_probs=146.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|+
T Consensus 18 ~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~ 97 (280)
T PLN02253 18 GKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDI 97 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999999999999999999999999987654322111 01111245689999988877665 6899
Q ss_pred EEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||+||.... .....+.+...+++|+.++.++++++.... ...++++++||.... ++. +...
T Consensus 98 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~-~~~----------~~~~ 166 (280)
T PLN02253 98 MVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASA-IGG----------LGPH 166 (280)
T ss_pred EEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhc-ccC----------CCCc
Confidence 9999996421 123456778899999999998888765310 234578899886542 331 1123
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-c------cchHHHH-HHH-cCCCCCCCcceeeeccHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L------AKMIPLF-MMF-AGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~------~~~~~~~-~~~-~~~~~~~~~~~~~~v~v~ 229 (325)
.| .+|...+.....+..+ .++++..++|+.+.++.... . ......+ ... ...++ ....++.+
T Consensus 167 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-----~~~~~~~~ 241 (280)
T PLN02253 167 AYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANL-----KGVELTVD 241 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCC-----cCCCCCHH
Confidence 57 7787777766665554 38999999999998763110 0 0011111 000 01111 12247899
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCCCCH
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
|+++++..++.... .+..+++.+|...+.
T Consensus 242 dva~~~~~l~s~~~~~i~G~~i~vdgG~~~~~ 273 (280)
T PLN02253 242 DVANAVLFLASDEARYISGLNLMIDGGFTCTN 273 (280)
T ss_pred HHHHHHHhhcCcccccccCcEEEECCchhhcc
Confidence 99999999987543 334788877754443
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.2e-17 Score=135.44 Aligned_cols=217 Identities=15% Similarity=0.112 Sum_probs=140.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhh-------CCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~-------~~~d~vi 91 (325)
.++++||||+|+||++++++|+++|++|++++|+.+........ .....+..+|+.|.+++.+++ .++|+||
T Consensus 6 ~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 85 (249)
T PRK06500 6 GKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAVF 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999999999976543222111 111113457887777655443 3689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
|+||.... ..+..+.+...+++|+.++.++++++........++|++||... .+|. +....| .+|
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~-~~~~----------~~~~~Y~~sK 154 (249)
T PRK06500 86 INAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINA-HIGM----------PNSSVYAASK 154 (249)
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHh-ccCC----------CCccHHHHHH
Confidence 99986432 23455677889999999999999998742112356778777543 1442 223567 677
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---ccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
...+.....+..+ .+++++++||+.++++.... .......+ ......++. -+...+|+++++..++
T Consensus 155 ~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~va~~~~~l~ 228 (249)
T PRK06500 155 AALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLG------RFGTPEEIAKAVLYLA 228 (249)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHc
Confidence 7776666555433 48999999999999873110 01111111 111122221 2468899999999988
Q ss_pred cCCC---CCceEEeeCC
Q 020476 240 SNPS---YRGVINGTAP 253 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~ 253 (325)
..+. .+..+.+.++
T Consensus 229 ~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 229 SDESAFIVGSEIIVDGG 245 (249)
T ss_pred CccccCccCCeEEECCC
Confidence 7543 2235555544
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=9.1e-17 Score=134.75 Aligned_cols=217 Identities=16% Similarity=0.079 Sum_probs=138.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-ccccc----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||.+++++|+++|+.|+...++.. ..... ........+..+|+.|.+++.++++ ++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 457999999999999999999999999887764432 21111 1001111245689999888877664 68
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C---CCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--E---GVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~---~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
|+|||+|+.... .....+.....+++|+.++.++++++.+.. . ..+++|++||.... ++...
T Consensus 82 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~~-------- 152 (248)
T PRK06123 82 DALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAAR-LGSPG-------- 152 (248)
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhc-CCCCC--------
Confidence 999999986422 122345667889999999988887765410 1 12468999997541 43211
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
....| .+|...+.....+..+ .+++++++||+.++++...... ..... ......|+. -+.+++|+++
T Consensus 153 -~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~-~~~~~~~~~~~~p~~------~~~~~~d~a~ 224 (248)
T PRK06123 153 -EYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGG-EPGRVDRVKAGIPMG------RGGTAEEVAR 224 (248)
T ss_pred -CccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccC-CHHHHHHHHhcCCCC------CCcCHHHHHH
Confidence 01247 6777666665555443 4899999999999998422110 00111 111112221 1347899999
Q ss_pred HHHHHHcCCC---CCceEEeeCC
Q 020476 234 LIYEALSNPS---YRGVINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~ 253 (325)
+++.++.... .+..|++.++
T Consensus 225 ~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 225 AILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHhCccccCccCCEEeecCC
Confidence 9999887542 3448888765
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.6e-16 Score=135.27 Aligned_cols=221 Identities=23% Similarity=0.262 Sum_probs=152.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|+||||||||++|++++++|+++|++|++++|+++...... ....+...|+.+++.+...++++|.++++.+... .
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~---~~v~~~~~d~~~~~~l~~a~~G~~~~~~i~~~~~-~ 76 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA---GGVEVVLGDLRDPKSLVAGAKGVDGVLLISGLLD-G 76 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc---CCcEEEEeccCCHhHHHHHhccccEEEEEecccc-c
Confidence 68999999999999999999999999999999988766655 2222556788899999999999999999987531 1
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhh
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV 179 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~ 179 (325)
. . ...........+..+.+.. +.++++++|.... .. .....| ..+...|. ...
T Consensus 77 ~-----~-~~~~~~~~~~~~~a~~a~~---~~~~~~~~s~~~~--~~-----------~~~~~~~~~~~~~e~----~l~ 130 (275)
T COG0702 77 S-----D-AFRAVQVTAVVRAAEAAGA---GVKHGVSLSVLGA--DA-----------ASPSALARAKAAVEA----ALR 130 (275)
T ss_pred c-----c-chhHHHHHHHHHHHHHhcC---CceEEEEeccCCC--CC-----------CCccHHHHHHHHHHH----HHH
Confidence 1 0 1112223333344444432 4667777776654 11 011223 33332222 223
Q ss_pred cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCCCC
Q 020476 180 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPVR 257 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~~s 257 (325)
..+++++++|+..+|....... .......+.+. ..+....+++..+|++.++...+..+. ...+|.+.+++..+
T Consensus 131 ~sg~~~t~lr~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~~~~~~~~l~g~~~~~ 206 (275)
T COG0702 131 SSGIPYTTLRRAAFYLGAGAAF----IEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPATAGRTYELAGPEALT 206 (275)
T ss_pred hcCCCeEEEecCeeeeccchhH----HHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCcccCcEEEccCCceec
Confidence 3699999999777776543221 11222333333 223337899999999999999998875 44599999999999
Q ss_pred HHHHHHHHHHHhCCCCCC
Q 020476 258 LAEMCDHLGNVLGRPSWL 275 (325)
Q Consensus 258 ~~e~~~~i~~~~g~~~~~ 275 (325)
..++.+.+....|++...
T Consensus 207 ~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 207 LAELASGLDYTIGRPVGL 224 (275)
T ss_pred HHHHHHHHHHHhCCccee
Confidence 999999999999998543
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=133.48 Aligned_cols=217 Identities=14% Similarity=0.060 Sum_probs=141.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++++||||+|+||+++++.|+++|++|++++|+... .... ........+..+|+.|.+.+.++++ ++
T Consensus 2 ~k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 2 KKIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4589999999999999999999999999999998531 1111 0001111244678888887776653 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+|||++|.... .....+..+..++.|+.++.++. +.+++ .+.+++|++||... +... +.
T Consensus 82 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~iss~~~--~~~~---------~~ 148 (245)
T PRK12824 82 DILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCE--QGYGRIINISSVNG--LKGQ---------FG 148 (245)
T ss_pred CEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--hCCeEEEEECChhh--ccCC---------CC
Confidence 999999997532 23345667788899999988874 45555 45679999999765 3321 22
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.+.| .+|...+.....+.. ..++++++++|+.+.++.......... .......+ ...+...+|+++++.
T Consensus 149 ~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~va~~~~ 221 (245)
T PRK12824 149 QTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVL-QSIVNQIP------MKRLGTPEEIAAAVA 221 (245)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHH-HHHHhcCC------CCCCCCHHHHHHHHH
Confidence 3457 666554444333332 348999999999998764322111110 01111112 223567899999998
Q ss_pred HHHcCCC---CCceEEeeCCCCC
Q 020476 237 EALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~~ 256 (325)
.++.... .+.++++.++..+
T Consensus 222 ~l~~~~~~~~~G~~~~~~~g~~~ 244 (245)
T PRK12824 222 FLVSEAAGFITGETISINGGLYM 244 (245)
T ss_pred HHcCccccCccCcEEEECCCeec
Confidence 8886533 3458888888643
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=1e-16 Score=134.98 Aligned_cols=219 Identities=16% Similarity=0.080 Sum_probs=142.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||+++++.|+++|++|++++|+..+....... .....+..+|+.+.+++.++++ ++|+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 346899999999999999999999999999998876543221110 1111245689998887755442 47999
Q ss_pred EECCCCCCCC-----CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 91 VNLAGTPIGT-----RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 91 i~~a~~~~~~-----~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||||..... ....+.+...+++|+.++.++++++... ....+++|++||.... ++. +....|
T Consensus 89 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~-~~~----------~~~~~Y 157 (255)
T PRK05717 89 VCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRAR-QSE----------PDTEAY 157 (255)
T ss_pred EECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhc-CCC----------CCCcch
Confidence 9999975221 2245567789999999999999998631 0223679999987651 221 123457
Q ss_pred -HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+..+. ++++..++|+.+.++..... ...+......... ....+.+.+|++.++..+++.
T Consensus 158 ~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~-~~~~~~~~~~~~~-----~~~~~~~~~~va~~~~~l~~~ 231 (255)
T PRK05717 158 AASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQR-RAEPLSEADHAQH-----PAGRVGTVEDVAAMVAWLLSR 231 (255)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccc-cchHHHHHHhhcC-----CCCCCcCHHHHHHHHHHHcCc
Confidence 77777766665554443 58999999999998742211 0111111111110 112367899999999988865
Q ss_pred CC--CCc-eEEeeCCC
Q 020476 242 PS--YRG-VINGTAPN 254 (325)
Q Consensus 242 ~~--~~~-~~~~~~~~ 254 (325)
.. ..| ++.+.++.
T Consensus 232 ~~~~~~g~~~~~~gg~ 247 (255)
T PRK05717 232 QAGFVTGQEFVVDGGM 247 (255)
T ss_pred hhcCccCcEEEECCCc
Confidence 32 234 66665553
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.8e-17 Score=139.83 Aligned_cols=220 Identities=19% Similarity=0.123 Sum_probs=143.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc---CCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++++||||+|.||++++++|+++|++|++++|++++.... ........+..+|+.+++.+.++++ ++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 346899999999999999999999999999999987653110 0001111245688888888776664 589
Q ss_pred EEEECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 89 AVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 89 ~vi~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
+|||+||.... .....+.....++.|+.++.++.+++... ....++++++||.... ++ .+....|
T Consensus 86 ~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~----------~~~~~~Y~ 154 (258)
T PRK08628 86 GLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTAL-TG----------QGGTSGYA 154 (258)
T ss_pred EEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhc-cC----------CCCCchhH
Confidence 99999996422 12223567778889999988887776432 1234689999987651 22 1234567
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cch---HHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKM---IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~---~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.+|...+.....+.. ..+++++.++||.++++....+ ..+ .... ......+.. ..++..+|+|++++
T Consensus 155 ~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~dva~~~~ 229 (258)
T PRK08628 155 AAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLG-----HRMTTAEEIADTAV 229 (258)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCcc-----ccCCCHHHHHHHHH
Confidence 677777666665543 3489999999999998742110 000 0000 111111111 13688999999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.... ..| .+.+.++.
T Consensus 230 ~l~~~~~~~~~g~~~~~~gg~ 250 (258)
T PRK08628 230 FLLSERSSHTTGQWLFVDGGY 250 (258)
T ss_pred HHhChhhccccCceEEecCCc
Confidence 9997653 334 66665553
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.3e-16 Score=134.01 Aligned_cols=216 Identities=13% Similarity=0.088 Sum_probs=142.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh-------CCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~-------~~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|++++...... .........+|+.|.+++.+++ .++|
T Consensus 7 ~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 86 (250)
T PRK12939 7 GKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGLD 86 (250)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4789999999999999999999999999999988654322111 0111123457888888877665 3689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||++|.... .....+.....+..|+.++.++++++... ..+.+++|++||... +... +....
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~ 155 (250)
T PRK12939 87 GLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTA--LWGA---------PKLGA 155 (250)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhh--ccCC---------CCcch
Confidence 99999996432 22234556677889999998888876531 023458999999765 2211 12345
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc--chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+.....+.. ..++.++.++||.+..+...... .+... .... .....+++++|++++++.
T Consensus 156 y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~dva~~~~~ 227 (250)
T PRK12939 156 YVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAY--YLKG------RALERLQVPDDVAGAVLF 227 (250)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHH--HHhc------CCCCCCCCHHHHHHHHHH
Confidence 6 566666555544433 24899999999988766432111 11111 1111 122347899999999999
Q ss_pred HHcCCC---CCceEEeeCCC
Q 020476 238 ALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~ 254 (325)
++..+. .+..+++.++.
T Consensus 228 l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 228 LLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred HhCccccCccCcEEEECCCc
Confidence 997642 33477777764
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.7e-16 Score=136.29 Aligned_cols=217 Identities=13% Similarity=0.031 Sum_probs=143.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
++++||||+|+||.++++.|+++|++|++..|+.+.. ..+. ..........+|+.|.+++.++++ ++
T Consensus 50 k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 129 (294)
T PRK07985 50 RKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALGGL 129 (294)
T ss_pred CEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 6899999999999999999999999999887754321 1111 101111134578888887765543 57
Q ss_pred CEEEECCCCCC----CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 88 TAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 88 d~vi~~a~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|++||+||... ......+.+...+++|+.++..+++++.......+++|++||... +... +....
T Consensus 130 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~--~~~~---------~~~~~ 198 (294)
T PRK07985 130 DIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA--YQPS---------PHLLD 198 (294)
T ss_pred CEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh--ccCC---------CCcch
Confidence 99999998632 123456778889999999999999888653122368999999876 4322 12345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+..+ .|+++..++||++.++........-... ......+. ..+...+|+|+++..+
T Consensus 199 Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~r~~~pedva~~~~fL 272 (294)
T PRK07985 199 YAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPM------KRAGQPAELAPVYVYL 272 (294)
T ss_pred hHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCC------CCCCCHHHHHHHHHhh
Confidence 7 6777766666555544 4899999999999987421110000111 11111111 2356789999999999
Q ss_pred HcCCC--CCc-eEEeeCCC
Q 020476 239 LSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 239 ~~~~~--~~~-~~~~~~~~ 254 (325)
+.... ..| ++.+.+|.
T Consensus 273 ~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 273 ASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred hChhcCCccccEEeeCCCe
Confidence 97643 234 77776664
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.4e-17 Score=134.33 Aligned_cols=210 Identities=15% Similarity=0.121 Sum_probs=137.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++|+||||+|+||++++++|+++|++|++++|++.+........ ....+..+|+.|.+++.++++ ++|+
T Consensus 6 ~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (237)
T PRK07326 6 GKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLDV 85 (237)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999999999999999999999999999875533221110 111134578888887776654 6899
Q ss_pred EEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 90 VVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 90 vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
|||+++..... ....+.....+++|+.++..+++++... ..+.+++|++||... +... .....|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~~---------~~~~~y~ 154 (237)
T PRK07326 86 LIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAG--TNFF---------AGGAAYN 154 (237)
T ss_pred EEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhh--ccCC---------CCCchHH
Confidence 99999864321 2344556778899999999888877532 024467999998754 2211 123346
Q ss_pred HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+. ...+++++++||+.+.++....... ... ...+..+|++++++.++..
T Consensus 155 ~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~~--------------~~~--~~~~~~~d~a~~~~~~l~~ 218 (237)
T PRK07326 155 ASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTPS--------------EKD--AWKIQPEDIAQLVLDLLKM 218 (237)
T ss_pred HHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCcccccccc--------------hhh--hccCCHHHHHHHHHHHHhC
Confidence 56654444444332 2358999999999987763211100 000 0137889999999999987
Q ss_pred CC--CCceEEeeCCCCC
Q 020476 242 PS--YRGVINGTAPNPV 256 (325)
Q Consensus 242 ~~--~~~~~~~~~~~~~ 256 (325)
+. ..+...+..+.+.
T Consensus 219 ~~~~~~~~~~~~~~~~~ 235 (237)
T PRK07326 219 PPRTLPSKIEVRPSRPP 235 (237)
T ss_pred CccccccceEEecCCCC
Confidence 75 3345556555443
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-16 Score=132.44 Aligned_cols=216 Identities=18% Similarity=0.092 Sum_probs=139.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
+.++++||||+|+||+++++.|+++|++|+++.|+.+.. .. .........+..+|+.+.+++.++++ +
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 456899999999999999999999999998887754321 11 10101111244578888888777665 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|+|||+||.... .....+.....+++|+.++.++++++.+.....+++|++||... +.. .+....
T Consensus 84 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~---------~~~~~~ 152 (245)
T PRK12937 84 IDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVI--ALP---------LPGYGP 152 (245)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccc--cCC---------CCCCch
Confidence 8999999996432 22345567778899999999998887653123358999988764 221 123445
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC--CcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG--GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+.....+..+ .++.+++++|+.+..+.. ........ ......+. ..+.+.+|+++++..
T Consensus 153 Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~d~a~~~~~ 224 (245)
T PRK12937 153 YAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQID--QLAGLAPL------ERLGTPEEIAAAVAF 224 (245)
T ss_pred hHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHH--HHHhcCCC------CCCCCHHHHHHHHHH
Confidence 7 6776666555544432 489999999998876531 11111111 11111121 225678999999999
Q ss_pred HHcCCC--CCc-eEEeeCC
Q 020476 238 ALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~ 253 (325)
++..+. ..| ++++.++
T Consensus 225 l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 225 LAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HcCccccCccccEEEeCCC
Confidence 987643 234 6676654
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.5e-17 Score=136.13 Aligned_cols=205 Identities=17% Similarity=0.150 Sum_probs=136.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+++||||||+|+||.++++.|++.|++|++++|++.+..... ..........+|+.|.+.+.++++ ++|
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 358999999999999999999999999999999865432211 111111134578888888776654 689
Q ss_pred EEEECCCCCCCC---CC-ChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIGT---RW-SSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~-~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||||||..... .. ..+.....+++|+.++.++++.+... ..+.+++|++||... +.. .+....
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~ 149 (263)
T PRK06181 81 ILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAG--LTG---------VPTRSG 149 (263)
T ss_pred EEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccc--cCC---------CCCccH
Confidence 999999864322 12 34446677899999999998887531 123478999999876 431 122345
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+.. ..++++++++||.+..+..... . ...+.+. ..+.....+++++|+|+++..+
T Consensus 150 Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~dva~~i~~~ 222 (263)
T PRK06181 150 YAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRA---L----DGDGKPLGKSPMQESKIMSAEECAEAILPA 222 (263)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhh---c----cccccccccccccccCCCCHHHHHHHHHHH
Confidence 7 667665555443332 2489999999999887632110 0 0011111 1112223689999999999999
Q ss_pred HcCC
Q 020476 239 LSNP 242 (325)
Q Consensus 239 ~~~~ 242 (325)
++.+
T Consensus 223 ~~~~ 226 (263)
T PRK06181 223 IARR 226 (263)
T ss_pred hhCC
Confidence 9864
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=2e-16 Score=132.94 Aligned_cols=218 Identities=19% Similarity=0.100 Sum_probs=143.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.+.++++||||+|+||+++++.|+++|++|++++|+...... .....+..+|+.+++++.++++ ++|+|
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETVD----GRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhhc----CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 345789999999999999999999999999999998754110 0111244678888888776664 46999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-C--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||||.... .....+.....+++|+.++..+++++... . .+.+++|++||... +... +....|
T Consensus 80 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~Y 148 (252)
T PRK07856 80 VNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSG--RRPS---------PGTAAY 148 (252)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccc--CCCC---------CCCchh
Confidence 999986422 23345567788999999999998877531 0 23468999999765 3211 223457
Q ss_pred -HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+. .+.+..++||.+..+.......-.... ......+. ..+...+|++++++.++.
T Consensus 149 ~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~~va~~~~~L~~ 222 (252)
T PRK07856 149 GAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPL------GRLATPADIAWACLFLAS 222 (252)
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCC------CCCcCHHHHHHHHHHHcC
Confidence 67776666665555432 389999999998766321100000111 11111121 235678999999999987
Q ss_pred CCC--CCc-eEEeeCCCCC
Q 020476 241 NPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 241 ~~~--~~~-~~~~~~~~~~ 256 (325)
... ..| .+.+.+|...
T Consensus 223 ~~~~~i~G~~i~vdgg~~~ 241 (252)
T PRK07856 223 DLASYVSGANLEVHGGGER 241 (252)
T ss_pred cccCCccCCEEEECCCcch
Confidence 543 344 7777766543
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.2e-16 Score=135.70 Aligned_cols=204 Identities=17% Similarity=0.139 Sum_probs=133.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
|+|+||||+|+||.+++++|+++|++|++++|+.+...... .......+..+|+.|.+++.++++ ++|+
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 58999999999999999999999999999999875433211 111111245678888887776654 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||+||.... .....+..+..+++|+.++..+.++ +++ .+.+++|++||... +... +..+
T Consensus 81 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~vsS~~~--~~~~---------~~~~ 147 (270)
T PRK05650 81 IVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKR--QKSGRIVNIASMAG--LMQG---------PAMS 147 (270)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--CCCCEEEEECChhh--cCCC---------CCch
Confidence 9999997533 2223455666788998777665554 555 45678999999865 3211 2234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+...+.+..+ .++++++++|+.+.++.........+........ .....+++++|+|+.++.+
T Consensus 148 ~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~vA~~i~~~ 222 (270)
T PRK05650 148 SYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGK-----LLEKSPITAADIADYIYQQ 222 (270)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHH-----HhhcCCCCHHHHHHHHHHH
Confidence 66 6666555444444443 4899999999999877432211111111000000 0012358899999999999
Q ss_pred HcCC
Q 020476 239 LSNP 242 (325)
Q Consensus 239 ~~~~ 242 (325)
++++
T Consensus 223 l~~~ 226 (270)
T PRK05650 223 VAKG 226 (270)
T ss_pred HhCC
Confidence 9864
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=9.6e-17 Score=134.47 Aligned_cols=220 Identities=14% Similarity=0.055 Sum_probs=138.9
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..++++|+|+||+|+||.++++.|++.|++|+++ +|+......... .........+|+.|++.+.++++
T Consensus 2 ~~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T PRK05565 2 KLMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKF 81 (247)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHh
Confidence 3456799999999999999999999999999998 887654322111 00111244678888888776654
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|+|||++|.... .....+..+..+++|+.++.++++++... ..+.+++|++||.... ++. +
T Consensus 82 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~~~----------~ 150 (247)
T PRK05565 82 GKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGL-IGA----------S 150 (247)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhc-cCC----------C
Confidence 78999999997522 12345567788899999977777666431 0345679999997652 331 1
Q ss_pred CCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+.. ..+++++.+||+.+..+.......- ........ .....+...+|+++++
T Consensus 151 ~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~-~~~~~~~~------~~~~~~~~~~~va~~~ 223 (247)
T PRK05565 151 CEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEE-DKEGLAEE------IPLGRLGKPEEIAKVV 223 (247)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChH-HHHHHHhc------CCCCCCCCHHHHHHHH
Confidence 23346 555443333222222 2589999999999876533221110 00011111 1112367889999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.... .+| .+++.++.
T Consensus 224 ~~l~~~~~~~~~g~~~~~~~~~ 245 (247)
T PRK05565 224 LFLASDDASYITGQIITVDGGW 245 (247)
T ss_pred HHHcCCccCCccCcEEEecCCc
Confidence 99987644 334 66666653
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.1e-16 Score=134.20 Aligned_cols=218 Identities=17% Similarity=0.112 Sum_probs=133.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
|++++||||+|+||++++++|+++|++|+++ .|+++....... .........+|+.|.+++.++++ ++
T Consensus 1 ~~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~i 80 (247)
T PRK09730 1 MAIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPL 80 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 3589999999999999999999999999875 454433221110 00111235689999988877654 46
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-----CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-----PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-----~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
|+|||+|+.... .....+.....+++|+.++..+++++... ....+++|++||.... ++...
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~-~~~~~-------- 151 (247)
T PRK09730 81 AALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASR-LGAPG-------- 151 (247)
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-cCCCC--------
Confidence 899999996422 22234456788899999987766654321 0123569999997551 33110
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+.. ..+++++++||+.++++..................+.. -..+.+|++++
T Consensus 152 -~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~dva~~ 224 (247)
T PRK09730 152 -EYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQ------RGGQPEEVAQA 224 (247)
T ss_pred -cccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence 11246 566655554444332 24899999999999998532111100011111222221 12478999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCC
Q 020476 235 IYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~ 253 (325)
++.++..+. ..| .+++.++
T Consensus 225 ~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 225 IVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHhhcChhhcCccCcEEecCCC
Confidence 999887542 334 6665553
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=1.9e-16 Score=133.34 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=140.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||++++++|++.|++|++++|+.+.. ... ...........+|+.|++.+.++++ +
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999976431 111 1111111134578888887776654 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+||||||.... .....+..+..+++|+.++..+++++ ++ .+.+++|++||.... .+. . .+
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~~-~~~-~-------~~ 155 (254)
T PRK06114 87 LTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLE--NGGGSIVNIASMSGI-IVN-R-------GL 155 (254)
T ss_pred CCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHh--cCCcEEEEECchhhc-CCC-C-------CC
Confidence 7999999997432 23345677888999999987766654 33 445689999987641 221 1 11
Q ss_pred CCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+.. ..|+++.+++||.+.++..... ...... ......|++ .+...+|++.+
T Consensus 156 ~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~-~~~~~~~~~~~~~p~~------r~~~~~dva~~ 228 (254)
T PRK06114 156 LQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRP-EMVHQTKLFEEQTPMQ------RMAKVDEMVGP 228 (254)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccc-cchHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence 23457 667665555555443 3489999999999987642111 111111 111112221 25678999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++.++.+.. ..| ++.+.+|.
T Consensus 229 ~~~l~s~~~~~~tG~~i~~dgg~ 251 (254)
T PRK06114 229 AVFLLSDAASFCTGVDLLVDGGF 251 (254)
T ss_pred HHHHcCccccCcCCceEEECcCE
Confidence 999987533 334 66666553
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.7e-16 Score=132.40 Aligned_cols=218 Identities=15% Similarity=0.081 Sum_probs=140.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|.||.++++.|++.|++|++++|++++...... ......+..+|+.+++++.++++ ++|
T Consensus 6 ~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (254)
T PRK07478 6 GKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGLD 85 (254)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998765432211 11111234578888887776654 689
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++||+||.... .....+.....+++|+.++..+ +..+++ .+.+++|++||... +.. ..+.
T Consensus 86 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~--~~~~~iv~~sS~~~--~~~--------~~~~ 153 (254)
T PRK07478 86 IAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLA--RGGGSLIFTSTFVG--HTA--------GFPG 153 (254)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCceEEEEechHh--hcc--------CCCC
Confidence 99999996421 2334556788899999876655 445555 45678999999765 321 1123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+..+ .++++..++||.+-.+.................. .....+...+|++++++
T Consensus 154 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~ 228 (254)
T PRK07478 154 MAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGL-----HALKRMAQPEEIAQAAL 228 (254)
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhc-----CCCCCCcCHHHHHHHHH
Confidence 4567 7777776666655544 3799999999999766321111000101111100 01123578999999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.++. ..| ++.+.++.
T Consensus 229 ~l~s~~~~~~~G~~~~~dgg~ 249 (254)
T PRK07478 229 FLASDAASFVTGTALLVDGGV 249 (254)
T ss_pred HHcCchhcCCCCCeEEeCCch
Confidence 9987643 234 66665553
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.9e-16 Score=133.24 Aligned_cols=217 Identities=15% Similarity=0.102 Sum_probs=140.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccCCC-CCccccCceeecCCchhHhhhC-------C-CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------G-ST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~-~d 88 (325)
+.++|+||||+|+||+++++.|++.|++|+...++. ......... ........+|+.|++++.++++ . +|
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 346899999999999999999999999998876543 222111110 0011134678888888776664 2 89
Q ss_pred EEEECCCCCC---------CCCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 89 AVVNLAGTPI---------GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 89 ~vi~~a~~~~---------~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++||+|+... ......+.....+++|+.++.++++++... ..+.+++|++||... .. .
T Consensus 84 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~---------~ 152 (253)
T PRK08642 84 TVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGTNLF--QN---------P 152 (253)
T ss_pred EEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECCccc--cC---------C
Confidence 9999998521 122345567788999999999998887521 034568999998643 21 1
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..+.+.| .+|...+.....+..+ .++++..++||.+..+....... -.... .....+ ...+.+.+|++
T Consensus 153 ~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~va 225 (253)
T PRK08642 153 VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATP-DEVFDLIAATTP------LRKVTTPQEFA 225 (253)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCC-HHHHHHHHhcCC------cCCCCCHHHHH
Confidence 1123467 7787777776666554 47999999999887653111000 01111 111112 13478999999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+++..++..+. ..| ++.+.++
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 226 DAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHHcCchhcCccCCEEEeCCC
Confidence 99999997543 334 6766665
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-16 Score=128.83 Aligned_cols=213 Identities=15% Similarity=0.092 Sum_probs=136.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~~~~d~vi~~a~~ 96 (325)
.+.++++||||+|+||.++++.|+++|++|++++|++..... .. .....+|+.++ +.+.+.+.++|+|||+||.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~--~~---~~~~~~D~~~~~~~~~~~~~~id~lv~~ag~ 77 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDLS--GN---FHFLQLDLSDDLEPLFDWVPSVDILCNTAGI 77 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccccC--Cc---EEEEECChHHHHHHHHHhhCCCCEEEECCCC
Confidence 345789999999999999999999999999999997643211 11 11335677666 3334444579999999985
Q ss_pred CC----CCCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHH
Q 020476 97 PI----GTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC 169 (325)
Q Consensus 97 ~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~ 169 (325)
.. ..+...+.....+++|+.++.++++++... ..+.+++|++||... +... +....| .+|..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~a 146 (235)
T PRK06550 78 LDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIAS--FVAG---------GGGAAYTASKHA 146 (235)
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhh--ccCC---------CCCcccHHHHHH
Confidence 31 134456677889999999998888876531 034468999998765 2211 123346 56655
Q ss_pred HHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC-
Q 020476 170 REWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS- 243 (325)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~- 243 (325)
.+.....+..+ .++++++++|+++.++... .+.. .... ......+ ...+...+|+|++++.++.+..
T Consensus 147 ~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~a~~~~~l~s~~~~ 219 (235)
T PRK06550 147 LAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEP-GGLADWVARETP------IKRWAEPEEVAELTLFLASGKAD 219 (235)
T ss_pred HHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCc-hHHHHHHhccCC------cCCCCCHHHHHHHHHHHcChhhc
Confidence 44444443332 4899999999999876421 1110 0111 1111111 2336788999999999996543
Q ss_pred -CCc-eEEeeCC
Q 020476 244 -YRG-VINGTAP 253 (325)
Q Consensus 244 -~~~-~~~~~~~ 253 (325)
..| ++.+.+|
T Consensus 220 ~~~g~~~~~~gg 231 (235)
T PRK06550 220 YMQGTIVPIDGG 231 (235)
T ss_pred cCCCcEEEECCc
Confidence 334 5666555
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=133.61 Aligned_cols=224 Identities=10% Similarity=0.013 Sum_probs=142.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc----c----CCCCCccccCceeecCCchhHhhhC------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~----~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
.++++||||+|+||.++++.|++.|++|+++.++...... . ...........+|+.+++++.++++
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 87 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAAF 87 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHhh
Confidence 4689999999999999999999999998888765432111 0 0000011134678889888876654
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++|++||+||.... .....+.....+++|+.++..+++++.......+++++++|+....+. +..
T Consensus 88 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~~~-----------~~~ 156 (257)
T PRK12744 88 GRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGAFT-----------PFY 156 (257)
T ss_pred CCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcccC-----------CCc
Confidence 58999999997422 334556678889999999999988886532223567776544331121 223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .+++++.++||.+.++........ .............+.....+.+.+|++.++..
T Consensus 157 ~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 235 (257)
T PRK12744 157 SAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGA-EAVAYHKTAAALSPFSKTGLTDIEDIVPFIRF 235 (257)
T ss_pred ccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhcccccc-chhhcccccccccccccCCCCCHHHHHHHHHH
Confidence 457 7787777777666654 379999999999976632111000 00000000000111112247899999999999
Q ss_pred HHcCCC--CCceEEeeCCCC
Q 020476 238 ALSNPS--YRGVINGTAPNP 255 (325)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~~ 255 (325)
+++... .+.++++.++..
T Consensus 236 l~~~~~~~~g~~~~~~gg~~ 255 (257)
T PRK12744 236 LVTDGWWITGQTILINGGYT 255 (257)
T ss_pred hhcccceeecceEeecCCcc
Confidence 998542 234888877643
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=151.64 Aligned_cols=225 Identities=17% Similarity=0.110 Sum_probs=149.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|+||.++++.|+++|++|++++|+.+......... .......+|+.|.+++.++++ ++|+
T Consensus 422 gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDv 501 (681)
T PRK08324 422 GKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDI 501 (681)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 368999999999999999999999999999999875533221110 011244678888888776654 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCC-CCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGV-RPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
||||||.... .....+.+...+++|+.++..+++++.+.. .+. +++|++||... +... +....
T Consensus 502 vI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~--~~~~---------~~~~~ 570 (681)
T PRK08324 502 VVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNA--VNPG---------PNFGA 570 (681)
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccc--cCCC---------CCcHH
Confidence 9999996532 223456677889999999998876664210 232 68999999765 2211 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEE-cCCCCcccchHHHHHHHcCC-------CCCCCcceeeeccHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGG-------PLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~v~D~ 231 (325)
| .+|...+.....+..+ .++++++++|+.+| +.+... ..+........+. ....+...+.+++++|+
T Consensus 571 Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~Dv 649 (681)
T PRK08324 571 YGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWT-GEWIEARAAAYGLSEEELEEFYRARNLLKREVTPEDV 649 (681)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCcccc-chhhhhhhhhccCChHHHHHHHHhcCCcCCccCHHHH
Confidence 7 6777777666665543 37999999999998 543211 1111000000111 11234455678999999
Q ss_pred HHHHHHHHc--CCCC-CceEEeeCCCCC
Q 020476 232 VNLIYEALS--NPSY-RGVINGTAPNPV 256 (325)
Q Consensus 232 a~a~~~~~~--~~~~-~~~~~~~~~~~~ 256 (325)
|+++..++. .... +.++++.+|...
T Consensus 650 A~a~~~l~s~~~~~~tG~~i~vdgG~~~ 677 (681)
T PRK08324 650 AEAVVFLASGLLSKTTGAIITVDGGNAA 677 (681)
T ss_pred HHHHHHHhCccccCCcCCEEEECCCchh
Confidence 999999984 2333 348999888643
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=132.88 Aligned_cols=212 Identities=11% Similarity=0.028 Sum_probs=141.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
.++++||||+|.||+++++.|++.|++|++++|+...... .....+|+.|++++.++++ ++|+|||
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~-------~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~ 78 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYND-------VDYFKVDVSNKEQVIKGIDYVISKYGRIDILVN 78 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCc-------eEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999998654321 1145689999888776654 6899999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
+||.... .....+.+...+++|+.++..+++++.... .+.+++|++||... +.. .+....| .+
T Consensus 79 ~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~s 147 (258)
T PRK06398 79 NAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQS--FAV---------TRNAAAYVTS 147 (258)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchh--ccC---------CCCCchhhhh
Confidence 9997432 223455677889999999888877664310 34578999999866 331 1234567 67
Q ss_pred HHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcc--------cc-hHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 167 EVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL--------AK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 167 k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~--------~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
|...+.....+..+. ++++..++||.+-.+..... .. ....... +........+...+|+++++
T Consensus 148 Kaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~eva~~~ 222 (258)
T PRK06398 148 KHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIRE-----WGEMHPMKRVGKPEEVAYVV 222 (258)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHh-----hhhcCCcCCCcCHHHHHHHH
Confidence 777666665554432 48999999998866521100 00 0000000 01111122367899999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.... ..| ++.+.+|.
T Consensus 223 ~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 223 AFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred HHHcCcccCCCCCcEEEECCcc
Confidence 99987543 334 66666664
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=134.90 Aligned_cols=216 Identities=13% Similarity=0.081 Sum_probs=137.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
||+++||||+|+||+++++.|+++|++|++++|+........... .....+|+.+.+.+.++++ ++|+|||
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAG--FTAVQLDVNDGAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCC--CeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 468999999999999999999999999999999875543322111 1144689998887776553 6899999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
+||.... .....+.....+++|+.++.++++++... ..+.+++|++||.... ++ .+....| .+|
T Consensus 79 ~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~----------~~~~~~Y~~sK 147 (274)
T PRK05693 79 NAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGV-LV----------TPFAGAYCASK 147 (274)
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCcccc-CC----------CCCccHHHHHH
Confidence 9996432 22345667788999999988888776321 0234678888886541 22 1223457 667
Q ss_pred HHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-----------cchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 168 VCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-----------AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 168 ~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
...+.....+.. ..|+++++++||.+..+-.... ..+.+............. -.....+|+|+
T Consensus 148 ~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~a~ 224 (274)
T PRK05693 148 AAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQ---DNPTPAAEFAR 224 (274)
T ss_pred HHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhcc---CCCCCHHHHHH
Confidence 665555444433 2589999999999976521110 001111100000000000 12457899999
Q ss_pred HHHHHHcCCCCCceEEee
Q 020476 234 LIYEALSNPSYRGVINGT 251 (325)
Q Consensus 234 a~~~~~~~~~~~~~~~~~ 251 (325)
.++.++.++.....|.++
T Consensus 225 ~i~~~~~~~~~~~~~~~g 242 (274)
T PRK05693 225 QLLAAVQQSPRPRLVRLG 242 (274)
T ss_pred HHHHHHhCCCCCceEEec
Confidence 999999876544455444
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=8.6e-17 Score=125.98 Aligned_cols=284 Identities=13% Similarity=0.127 Sum_probs=189.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh--CCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--QGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--~~~d~vi~~a~ 95 (325)
..||||||+-|.+|..++..|..+ |. .|+.-+-...+. .....+. +.-.|+.|...+++++ ..+|++||..+
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~-~V~~~GP---yIy~DILD~K~L~eIVVn~RIdWL~HfSA 119 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPA-NVTDVGP---YIYLDILDQKSLEEIVVNKRIDWLVHFSA 119 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCch-hhcccCC---chhhhhhccccHHHhhcccccceeeeHHH
Confidence 469999999999999999888755 54 455444333222 2222222 5567999999999987 47999999977
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCc-eecCCC--CCCCch-HHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE-VFDESS--PSGNDY-LAEVCRE 171 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~-~~~e~~--~~~~~y-~~k~~~~ 171 (325)
.. +...+.+.....++|+.|..|+++.+++ .+. ++..-||.++ ||..... |-..-+ .+...| .+|..+|
T Consensus 120 LL--SAvGE~NVpLA~~VNI~GvHNil~vAa~--~kL-~iFVPSTIGA--FGPtSPRNPTPdltIQRPRTIYGVSKVHAE 192 (366)
T KOG2774|consen 120 LL--SAVGETNVPLALQVNIRGVHNILQVAAK--HKL-KVFVPSTIGA--FGPTSPRNPTPDLTIQRPRTIYGVSKVHAE 192 (366)
T ss_pred HH--HHhcccCCceeeeecchhhhHHHHHHHH--cCe-eEeecccccc--cCCCCCCCCCCCeeeecCceeechhHHHHH
Confidence 53 3334555667788999999999999999 444 4556677777 8854332 211111 134567 8999999
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcC---CCCcccchHHHH-HHH-cCCC--CCCCcceeeeccHHHHHHHHHHHHcCCC-
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGK---DGGALAKMIPLF-MMF-AGGP--LGSGQQWFSWIHLDDIVNLIYEALSNPS- 243 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~---~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~~v~v~D~a~a~~~~~~~~~- 243 (325)
.+-+.+..++|+++-.+|.+.+... +++....-...+ .+. +|+. ...++.....++.+|.-++++..+..+.
T Consensus 193 L~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~~~~~~~~~a~~~ 272 (366)
T KOG2774|consen 193 LLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCMASVIQLLAADSQ 272 (366)
T ss_pred HHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHHHHHHHHHhCCHH
Confidence 9999999999999999998888764 333333333333 333 3433 2567788899999999999999987664
Q ss_pred --CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHH-HHcCCCcccccHHHHH
Q 020476 244 --YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDAL 320 (325)
Q Consensus 244 --~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lg~~p~~~~~~~~l 320 (325)
...+||+.+- .+|-.|+++.+.+..-.-. +......-. ...+. .+..+|.+.+ +++.|+-++ .+-..+
T Consensus 273 ~lkrr~ynvt~~-sftpee~~~~~~~~~p~~~-i~y~~~srq-~iad~-----wp~~~dds~ar~~wh~~h~~-~l~~~i 343 (366)
T KOG2774|consen 273 SLKRRTYNVTGF-SFTPEEIADAIRRVMPGFE-IDYDICTRQ-SIADS-----WPMSLDDSEARTEWHEKHSL-HLLSII 343 (366)
T ss_pred Hhhhheeeecee-ccCHHHHHHHHHhhCCCce-eecccchhh-hhhhh-----cccccCchhHhhHHHHhhhh-hHHHHH
Confidence 4569999855 6999999999998874211 111111000 11111 2233444444 578888887 466555
Q ss_pred HHH
Q 020476 321 KAI 323 (325)
Q Consensus 321 ~~~ 323 (325)
.-+
T Consensus 344 ~~~ 346 (366)
T KOG2774|consen 344 STV 346 (366)
T ss_pred HHH
Confidence 433
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.3e-16 Score=130.90 Aligned_cols=202 Identities=16% Similarity=0.086 Sum_probs=138.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC-----ccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~d~~~~~~~~~------- 85 (325)
+++++++|||||+.||..++++|+++|++|+.+.|+.++...+..... ......+|+.+++.+.++.+
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 345689999999999999999999999999999999886554433211 11244678888888877653
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
.+|++|||||.... .+.+.+...+++++|+.+...+ +..+.+ .+.+.+|.++|.+. +-. .
T Consensus 84 ~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~--~~~G~IiNI~S~ag--~~p---------~ 150 (265)
T COG0300 84 PIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVE--RGAGHIINIGSAAG--LIP---------T 150 (265)
T ss_pred cccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCceEEEEechhh--cCC---------C
Confidence 59999999998644 3445666788899999885554 555555 56779999999887 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
|...-| .+|.......+.... ..|+.++.|.||.+....... .+..........-++..+|+|+.
T Consensus 151 p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~~-----------~~~~~~~~~~~~~~~~~~~va~~ 219 (265)
T COG0300 151 PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFDA-----------KGSDVYLLSPGELVLSPEDVAEA 219 (265)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccccccc-----------cccccccccchhhccCHHHHHHH
Confidence 334456 555443332222222 348999999999888663210 00111111123458999999999
Q ss_pred HHHHHcCCC
Q 020476 235 IYEALSNPS 243 (325)
Q Consensus 235 ~~~~~~~~~ 243 (325)
.+..+.+.+
T Consensus 220 ~~~~l~~~k 228 (265)
T COG0300 220 ALKALEKGK 228 (265)
T ss_pred HHHHHhcCC
Confidence 999998764
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=133.31 Aligned_cols=198 Identities=15% Similarity=0.083 Sum_probs=133.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||.+++++|+++|++|++++|++.+..... .......+..+|+.+++++.++++ ++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 368999999999999999999999999999999865432211 000011134678888888877664 689
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||++|..... +...+...+.+++|+.++.++++++... ..+.+++|++||.... ++. +....
T Consensus 87 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~-~~~----------~~~~~ 155 (239)
T PRK07666 87 ILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQ-KGA----------AVTSA 155 (239)
T ss_pred EEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhc-cCC----------CCCcc
Confidence 999999864321 2345567788999999988887776521 1456789999997651 221 12344
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+.. ..+++++++||+.+.++..... . .+... ...++..+|+|+++..++
T Consensus 156 Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~-------~----~~~~~---~~~~~~~~~~a~~~~~~l 221 (239)
T PRK07666 156 YSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL-------G----LTDGN---PDKVMQPEDLAEFIVAQL 221 (239)
T ss_pred hHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc-------c----ccccC---CCCCCCHHHHHHHHHHHH
Confidence 6 566555444433332 3589999999999887632111 0 00111 123578999999999999
Q ss_pred cCC
Q 020476 240 SNP 242 (325)
Q Consensus 240 ~~~ 242 (325)
..+
T Consensus 222 ~~~ 224 (239)
T PRK07666 222 KLN 224 (239)
T ss_pred hCC
Confidence 876
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.7e-16 Score=133.56 Aligned_cols=220 Identities=12% Similarity=0.095 Sum_probs=143.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...+++|||||+|.||.+++++|+++|++|++++|+.++..... ..........+|+.|.+.+.++++ +
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 34568999999999999999999999999999999865432221 111111134578888888776653 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+|||+||.... .+...+.+...+++|+.++..+++++.... .+.+++|++||.... ++. +..
T Consensus 87 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~ 155 (254)
T PRK08085 87 IDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSE-LGR----------DTI 155 (254)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhc-cCC----------CCC
Confidence 8999999996422 234566778889999999888777665321 345689999987541 221 223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .++++..++||++..+........-.... .....| ...+...+|+++++.
T Consensus 156 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~~va~~~~ 229 (254)
T PRK08085 156 TPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTP------AARWGDPQELIGAAV 229 (254)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 457 6777666666555443 48999999999998874221100000011 111112 123678899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.... ..| +..+.+|.
T Consensus 230 ~l~~~~~~~i~G~~i~~dgg~ 250 (254)
T PRK08085 230 FLSSKASDFVNGHLLFVDGGM 250 (254)
T ss_pred HHhCccccCCcCCEEEECCCe
Confidence 9987533 344 55555553
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=3e-16 Score=132.22 Aligned_cols=204 Identities=15% Similarity=0.089 Sum_probs=133.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh--------CCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~--------~~~d~vi 91 (325)
+++|+||||+|+||.++++.|+++|++|++++|+.++.+...... .....+|+.|.+++.+++ ..+|.++
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLG--FTGILLDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCC--CeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 358999999999999999999999999999999876543322111 114457888877665443 2479999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|++|.... .....+.....++.|+.++.++ ++.+++ .+.+++|++||... +.. .+....|
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~--~~~~~iv~~ss~~~--~~~---------~~~~~~Y 146 (256)
T PRK08017 80 NNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP--HGEGRIVMTSSVMG--LIS---------TPGRGAY 146 (256)
T ss_pred ECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCCEEEEEcCccc--ccC---------CCCccHH
Confidence 99986422 1224455677889999887765 666666 56678999998643 211 1223457
Q ss_pred -HHHHHHHHHHHHH---hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTAL---KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 165 -~~k~~~~~~~~~~---~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
.+|...+.....+ ....+++++++|||.+..+..... . ......+. ..+...+.+++++|+++++..++
T Consensus 147 ~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~~~ 220 (256)
T PRK08017 147 AASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNV---N---QTQSDKPVENPGIAARFTLGPEAVVPKLRHAL 220 (256)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcc---c---chhhccchhhhHHHhhcCCCHHHHHHHHHHHH
Confidence 6676666544322 233589999999987754421110 0 00001111 11223345799999999999999
Q ss_pred cCCCC
Q 020476 240 SNPSY 244 (325)
Q Consensus 240 ~~~~~ 244 (325)
+++..
T Consensus 221 ~~~~~ 225 (256)
T PRK08017 221 ESPKP 225 (256)
T ss_pred hCCCC
Confidence 88753
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-16 Score=131.60 Aligned_cols=218 Identities=12% Similarity=0.046 Sum_probs=139.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
|+++++||||+|+||.++++.|+++|++|+++.|+... ..... ..........+|+.|++++.++++ .
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999999999999988765432 21111 111111244688888887766553 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+|||+||.... .....+.....+.+|+.+...+++++.... . ..+++|++||... .. ..+.
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~---------~~~~ 149 (256)
T PRK12743 81 IDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHE--HT---------PLPG 149 (256)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccc--cC---------CCCC
Confidence 8999999997532 223456678889999999999988765421 1 2358999998754 11 1123
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+.. ..+++++.++||.+.++.......-. ........++. .+.+.+|++.++.
T Consensus 150 ~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~-~~~~~~~~~~~------~~~~~~dva~~~~ 222 (256)
T PRK12743 150 ASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDV-KPDSRPGIPLG------RPGDTHEIASLVA 222 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHH-HHHHHhcCCCC------CCCCHHHHHHHHH
Confidence 4466 667666555444443 24899999999999987432111100 01111111221 2458899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.... ..| ++.+.++.
T Consensus 223 ~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 223 WLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred HHhCccccCcCCcEEEECCCc
Confidence 9887543 345 66666554
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.8e-16 Score=131.66 Aligned_cols=221 Identities=15% Similarity=0.051 Sum_probs=137.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||.++++.|+++|++|++++|+.+........ ........+|+.+++.+.++++ ++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999999999999999986543222110 1111134689999987776654 589
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+||||||.... .....+.....+++|+.++..+++++.... . ...++|++||.... ++. +...
T Consensus 82 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~ 150 (256)
T PRK08643 82 VVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGV-VGN----------PELA 150 (256)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccc-cCC----------CCCc
Confidence 99999986422 222345667888999998776666554310 1 23579999987651 331 1234
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC-------CCCCcceeeeccHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-------LGSGQQWFSWIHLDDI 231 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~v~v~D~ 231 (325)
.| .+|...+.....+.. ..|++++.++|+.+.++.... .........+.+ +........+...+|+
T Consensus 151 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 227 (256)
T PRK08643 151 VYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFD---IAHQVGENAGKPDEWGMEQFAKDITLGRLSEPEDV 227 (256)
T ss_pred hhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhH---HHhhhccccCCCchHHHHHHhccCCCCCCcCHHHH
Confidence 56 667665544444443 358999999999988763110 000000000000 0000011235688999
Q ss_pred HHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 232 VNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++..++.... .+| ++.+.++.
T Consensus 228 a~~~~~L~~~~~~~~~G~~i~vdgg~ 253 (256)
T PRK08643 228 ANCVSFLAGPDSDYITGQTIIVDGGM 253 (256)
T ss_pred HHHHHHHhCccccCccCcEEEeCCCe
Confidence 999999987543 344 66665553
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.3e-16 Score=129.83 Aligned_cols=191 Identities=17% Similarity=0.098 Sum_probs=133.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEEC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNL 93 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~ 93 (325)
...++|+||||+|+||+++++.|+++|+ +|++++|++.+.... ........+|+.|.+.+.++++ .+|+|||+
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 80 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTDL---GPRVVPLQLDVTDPASVAAAAEAASDVTILVNN 80 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhhc---CCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence 3446899999999999999999999998 999999987654321 1111245689999998887775 58999999
Q ss_pred CCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 94 AGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 94 a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||.... .....+.....+++|+.++..+++++... ..+.+++|++||... +... +....| .+
T Consensus 81 ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~--~~~~---------~~~~~y~~s 149 (238)
T PRK08264 81 AGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLS--WVNF---------PNLGTYSAS 149 (238)
T ss_pred CCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhh--ccCC---------CCchHhHHH
Confidence 997211 23345667788899999999998876421 035678999999765 4311 223456 56
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+..+ .+++++++||+.+.++..... ....+..+|+++.++..+..+
T Consensus 150 K~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~~--------------------~~~~~~~~~~a~~~~~~~~~~ 208 (238)
T PRK08264 150 KAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAGL--------------------DAPKASPADVARQILDALEAG 208 (238)
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccccccC--------------------CcCCCCHHHHHHHHHHHHhCC
Confidence 66665544444332 489999999998876531100 011577788999998888764
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=131.62 Aligned_cols=219 Identities=17% Similarity=0.129 Sum_probs=142.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||.++++.|+++|++|++++|+.++..... .......+..+|+.|++++.++++ ++
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3579999999999999999999999999999999765432211 111111245689999888865543 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|+|||+||.... .....+.+...++.|+.++.++++++... ..+.+++|++||.... ++.... .+..
T Consensus 91 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~-~~~~~~------~~~~ 163 (259)
T PRK08213 91 DILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGL-GGNPPE------VMDT 163 (259)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhc-cCCCcc------ccCc
Confidence 999999986422 23345566788899999999999977541 1245689999997651 332111 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...+.....+..+ .++++.+++|+.+-.+... ...+.+ ......++ .-+...+|++.++
T Consensus 164 ~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~---~~~~~~~~~~~~~~~~------~~~~~~~~va~~~ 234 (259)
T PRK08213 164 IAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTR---GTLERLGEDLLAHTPL------GRLGDDEDLKGAA 234 (259)
T ss_pred chHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchh---hhhHHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 567 6777776666555443 4899999999988665321 112211 11112221 1245689999998
Q ss_pred HHHHcCCC--CCc-eEEeeCC
Q 020476 236 YEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~ 253 (325)
..++.... ..| ++++.++
T Consensus 235 ~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 235 LLLASDASKHITGQILAVDGG 255 (259)
T ss_pred HHHhCccccCccCCEEEECCC
Confidence 88886543 344 6666655
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.7e-16 Score=130.05 Aligned_cols=220 Identities=15% Similarity=0.097 Sum_probs=145.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
....++|+||||+|+||.++++.|+++|++|++++|+.+....... .........+|+.|.+++.++++
T Consensus 8 ~l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 87 (255)
T PRK06113 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG 87 (255)
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3446799999999999999999999999999999987654322111 01011134689998887766543
Q ss_pred CCCEEEECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 GSTAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 ~~d~vi~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++|++|||||.... .....+.....+++|+.++.++++++... ..+.+++|++||... .. ..+..
T Consensus 88 ~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~---------~~~~~ 156 (255)
T PRK06113 88 KVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--EN---------KNINM 156 (255)
T ss_pred CCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccc--cC---------CCCCc
Confidence 57999999996422 23345667778999999999998887521 034468999999764 21 11223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...+.....+..+ .+++++++.||.+..+..... ..+.. ......++ ..+...+|+++++
T Consensus 157 ~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~--~~~~~~~~~~~~~~~------~~~~~~~d~a~~~ 228 (255)
T PRK06113 157 TSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSV--ITPEIEQKMLQHTPI------RRLGQPQDIANAA 228 (255)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccc--cCHHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 457 6777766666555442 479999999999876532110 11111 11111111 2367889999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
..++.... .+.++++.++..
T Consensus 229 ~~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 229 LFLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHHcCccccCccCCEEEECCCcc
Confidence 99997543 334788887753
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.1e-16 Score=131.43 Aligned_cols=219 Identities=15% Similarity=0.113 Sum_probs=141.1
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+....++|+||||+|+||+++++.|+++|++|++++|+++....... .........+|+.|++++.++++
T Consensus 7 ~~~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (256)
T PRK06124 7 FSLAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEH 86 (256)
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc
Confidence 33456799999999999999999999999999999998654322111 11111244678888887776654
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|+|||++|.... .+...+..+..+.+|+.++..+.+++.+. ..+.+++|++||... +... +
T Consensus 87 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~--~~~~---------~ 155 (256)
T PRK06124 87 GRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAG--QVAR---------A 155 (256)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechh--ccCC---------C
Confidence 46999999996432 22345567778999999988887555321 045678999998765 2111 1
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
....| .+|...+.....+..+ .++++..++|+.+.++..... ..+...+ ....+ ...+++.+|++
T Consensus 156 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~a 227 (256)
T PRK06124 156 GDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWL--AQRTP------LGRWGRPEEIA 227 (256)
T ss_pred CccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHH--HhcCC------CCCCCCHHHHH
Confidence 23456 5665555444433332 489999999999998742111 1111111 11111 12378999999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
.+++.+++++. ..| .+.+.++
T Consensus 228 ~~~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 228 GAAVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred HHHHHHcCcccCCcCCCEEEECCC
Confidence 99999998753 345 4444444
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=5.6e-16 Score=130.53 Aligned_cols=215 Identities=13% Similarity=0.046 Sum_probs=136.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
.++|+||||+|+||.+++++|+++|++|++++|+............ ..+..+|+.|.+++.++++ ++|+|||
T Consensus 7 ~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 7 GRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVG-GLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcC-CcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999999999998754332211110 0245689999888776664 5799999
Q ss_pred CCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 93 LAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 93 ~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||.... .+...+.....+++|+.++..+++.+ ++ .+.+++|++||.... +|.. +....
T Consensus 86 ~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~--~~~g~iv~~sS~~~~-~g~~---------~~~~~ 153 (255)
T PRK06057 86 NAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVR--QGKGSIINTASFVAV-MGSA---------TSQIS 153 (255)
T ss_pred CCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHH--hCCcEEEEEcchhhc-cCCC---------CCCcc
Confidence 9986422 12344567788899999887766654 33 345689999886431 4421 11234
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cc-hHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+........ ..++++++++||.+.++..... .. .....+.....+ ...+..++|+++++..
T Consensus 154 Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~a~~~~~ 227 (255)
T PRK06057 154 YTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVP------MGRFAEPEEIAAAVAF 227 (255)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCC------CCCCcCHHHHHHHHHH
Confidence 6 566544433332222 2489999999999987742111 00 000001111111 1247889999999998
Q ss_pred HHcCCC--C-CceEEeeCC
Q 020476 238 ALSNPS--Y-RGVINGTAP 253 (325)
Q Consensus 238 ~~~~~~--~-~~~~~~~~~ 253 (325)
++.... . +..+.+.++
T Consensus 228 l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 228 LASDDASFITASTFLVDGG 246 (255)
T ss_pred HhCccccCccCcEEEECCC
Confidence 886543 2 336666554
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=2.8e-16 Score=131.24 Aligned_cols=198 Identities=13% Similarity=0.095 Sum_probs=133.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
|++++||||+|.||..++++|+++|++|++++|++++...... ......+..+|+.|.+++.++++ ++|
T Consensus 6 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (241)
T PRK07454 6 MPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCPD 85 (241)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 5689999999999999999999999999999998754332211 00111134678888887766654 589
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+||.... .....+.....+++|+.++.++++.+ .+ .+.+++|++||... ++.. +..
T Consensus 86 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~~---------~~~ 152 (241)
T PRK07454 86 VLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRA--RGGGLIINVSSIAA--RNAF---------PQW 152 (241)
T ss_pred EEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--cCCcEEEEEccHHh--CcCC---------CCc
Confidence 99999986422 12234567778899999877766654 44 45578999999876 4321 223
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+.. ..+++++++||+.+-.+..... .. .. .......+..+|+|++++.
T Consensus 153 ~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~~-~~---------~~---~~~~~~~~~~~~va~~~~~ 219 (241)
T PRK07454 153 GAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDTE-TV---------QA---DFDRSAMLSPEQVAQTILH 219 (241)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCccccc-cc---------cc---ccccccCCCHHHHHHHHHH
Confidence 457 666666555444332 3489999999999876632110 00 00 0001135789999999999
Q ss_pred HHcCCC
Q 020476 238 ALSNPS 243 (325)
Q Consensus 238 ~~~~~~ 243 (325)
+++.+.
T Consensus 220 l~~~~~ 225 (241)
T PRK07454 220 LAQLPP 225 (241)
T ss_pred HHcCCc
Confidence 998775
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=6.5e-16 Score=130.71 Aligned_cols=219 Identities=13% Similarity=0.031 Sum_probs=140.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||.++++.|+++|++|++++|++++....... .....+..+|+.+.+++.++++ ++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 357999999999999999999999999999999986543221110 0111134588888888766554 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|+|||+||.... .....+.....+++|+.++.++++++.... .+.+++|++||.... ++ .+..
T Consensus 89 d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~-~~----------~~~~ 157 (263)
T PRK07814 89 DIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGR-LA----------GRGF 157 (263)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEcccccc-CC----------CCCC
Confidence 999999986422 233456778889999999999999886310 245689999986541 11 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
..| .+|...+.....+..+ ..++++.++|+.+..+.......-........+. .........+|++++++.+
T Consensus 158 ~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~va~~~~~l 232 (263)
T PRK07814 158 AAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKA-----TPLRRLGDPEDIAAAAVYL 232 (263)
T ss_pred chhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhc-----CCCCCCcCHHHHHHHHHHH
Confidence 467 6777666655555543 2588999999988765321110000011111110 0112256889999999999
Q ss_pred HcCCC---CCceEEeeCC
Q 020476 239 LSNPS---YRGVINGTAP 253 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~ 253 (325)
+.... .+..+.+.++
T Consensus 233 ~~~~~~~~~g~~~~~~~~ 250 (263)
T PRK07814 233 ASPAGSYLTGKTLEVDGG 250 (263)
T ss_pred cCccccCcCCCEEEECCC
Confidence 87532 2336666544
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.9e-16 Score=129.38 Aligned_cols=214 Identities=12% Similarity=0.055 Sum_probs=136.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
.++|+||||+|.||+++++.|+++|++|+++.|+. +....+..... .....+|+.|.+.+.+.++ ++|++||+||
T Consensus 6 ~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag 84 (237)
T PRK12742 6 GKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETG-ATAVQTDSADRDAVIDVVRKSGALDILVVNAG 84 (237)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhC-CeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence 46899999999999999999999999998887643 22221111100 1133478878777776654 5899999998
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE 171 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~ 171 (325)
.... .+...+.++..+++|+.++..++..+.......+++|++||... ... ..+....| .+|...+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~--------~~~~~~~Y~~sKaa~~ 154 (237)
T PRK12742 85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG--DRM--------PVAGMAAYAASKSALQ 154 (237)
T ss_pred CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc--ccC--------CCCCCcchHHhHHHHH
Confidence 6422 23345677889999999998887665542123468999998754 110 11234457 6777666
Q ss_pred HHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHH-HcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CC
Q 020476 172 WEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YR 245 (325)
Q Consensus 172 ~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~ 245 (325)
.....+..+ .++++++++||.+..+..... .+.... ....+. ..+...+|+++++..++.... ..
T Consensus 155 ~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~---~~~~~~~~~~~~~------~~~~~p~~~a~~~~~l~s~~~~~~~ 225 (237)
T PRK12742 155 GMARGLARDFGPRGITINVVQPGPIDTDANPAN---GPMKDMMHSFMAI------KRHGRPEEVAGMVAWLAGPEASFVT 225 (237)
T ss_pred HHHHHHHHHHhhhCeEEEEEecCcccCCccccc---cHHHHHHHhcCCC------CCCCCHHHHHHHHHHHcCcccCccc
Confidence 555544432 489999999999976632111 111111 111111 125788999999999987543 34
Q ss_pred c-eEEeeCC
Q 020476 246 G-VINGTAP 253 (325)
Q Consensus 246 ~-~~~~~~~ 253 (325)
| .+.+.++
T Consensus 226 G~~~~~dgg 234 (237)
T PRK12742 226 GAMHTIDGA 234 (237)
T ss_pred CCEEEeCCC
Confidence 4 5555544
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.7e-16 Score=130.16 Aligned_cols=218 Identities=16% Similarity=0.120 Sum_probs=137.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhh-------CCCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCI-------QGSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~-------~~~d~v 90 (325)
..++++||||+|+||+++++.|+++|+.|++..|+.++....... ........+|+.+.+++.+++ .++|+|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356999999999999999999999999999888876543322110 001113457888888877654 358999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
|||||.... .....+.+...+++|+.++.++++++.+. ..+.+++|++||.... ++.. ....|
T Consensus 85 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~----------~~~~Y~ 153 (245)
T PRK12936 85 VNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGV-TGNP----------GQANYC 153 (245)
T ss_pred EECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhC-cCCC----------CCcchH
Confidence 999997432 22345567888999999988887765421 0345789999997541 3321 23346
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|.........+.. ..+++++.++|+.+..+.......... .......+ ...+.+.+|+++++..++..
T Consensus 154 ~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~ia~~~~~l~~~ 226 (245)
T PRK12936 154 ASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQK-EAIMGAIP------MKRMGTGAEVASAVAYLASS 226 (245)
T ss_pred HHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHH-HHHhcCCC------CCCCcCHHHHHHHHHHHcCc
Confidence 555533333322222 248999999999876543211111000 00111111 12356799999999988865
Q ss_pred CC--CCc-eEEeeCCC
Q 020476 242 PS--YRG-VINGTAPN 254 (325)
Q Consensus 242 ~~--~~~-~~~~~~~~ 254 (325)
.. ..| ++++.++.
T Consensus 227 ~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 227 EAAYVTGQTIHVNGGM 242 (245)
T ss_pred cccCcCCCEEEECCCc
Confidence 43 234 78887764
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.8e-16 Score=129.64 Aligned_cols=215 Identities=16% Similarity=0.111 Sum_probs=139.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.|+++||||+|.||.++++.|++.|++|+++.|+.+.. ..+... ......+|+.|++++.++++ ++|+||
T Consensus 7 ~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~--~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 7 GKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREK--GVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhC--CCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 47899999999999999999999999999887754322 111111 01245689999888877654 589999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHH----HHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVT----SKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~----~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||.... .....+.+...+++|+.++ +.+++.+++ .+.+++|++||... ++.. .+....|
T Consensus 85 ~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~--~~~g~iv~isS~~~--~~~~--------~~~~~~Y 152 (255)
T PRK06463 85 NNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKL--SKNGAIVNIASNAG--IGTA--------AEGTTFY 152 (255)
T ss_pred ECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcCHHh--CCCC--------CCCccHh
Confidence 99987432 2234566778899999995 445555654 45678999999866 4311 1123457
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--ccchHHHH-H-HHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~~~~~~~~-~-~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.+|...+.....+..+ .++++..++||++-.+-... ........ . .....+ ...+...+|++++++
T Consensus 153 ~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~~~ 226 (255)
T PRK06463 153 AITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTV------LKTTGKPEDIANIVL 226 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCC------cCCCcCHHHHHHHHH
Confidence 6777666666555543 48999999999886542110 00001111 1 111111 223578999999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++..+. ..| .+.+.+|.
T Consensus 227 ~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 227 FLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HHcChhhcCCCCCEEEECCCe
Confidence 9987643 334 77776664
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=3.1e-16 Score=132.45 Aligned_cols=202 Identities=13% Similarity=0.114 Sum_probs=133.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC--CCccccCceeecCCchhHhhhC--------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~--------~~d~ 89 (325)
|++++||||+|+||.+++++|+++|++|++++|+++........ .....+..+|+.|.+++.++++ ++|+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 46899999999999999999999999999999987654332111 1111245789999887776543 4699
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||||.... .....+..+..+++|+.++..+++++... ..+..++|++||.... +|.. ....|
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~~----------~~~~Y 149 (260)
T PRK08267 81 LFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAI-YGQP----------GLAVY 149 (260)
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhC-cCCC----------Cchhh
Confidence 9999997533 22345567888999999999988776421 0345789999987541 4421 23456
Q ss_pred -HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
.+|...+.....+.. ..++++++++|+.+..+.... ...... .... ...-.+..+|++.+++.++
T Consensus 150 ~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~--~~~~--------~~~~~~~~~~va~~~~~~~ 219 (260)
T PRK08267 150 SATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDGTSNEVDA--GSTK--------RLGVRLTPEDVAEAVWAAV 219 (260)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCcccccccchhhh--hhHh--------hccCCCCHHHHHHHHHHHH
Confidence 566655554444432 348999999999987543111 000000 0000 0011356799999999999
Q ss_pred cCC
Q 020476 240 SNP 242 (325)
Q Consensus 240 ~~~ 242 (325)
+.+
T Consensus 220 ~~~ 222 (260)
T PRK08267 220 QHP 222 (260)
T ss_pred hCC
Confidence 764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.3e-16 Score=129.34 Aligned_cols=213 Identities=14% Similarity=0.113 Sum_probs=137.2
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
|+|||++|+||+++++.|+++|++|++++|+... .... ...........+|+.|.+++.++++ .+|+|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5899999999999999999999999999987622 1111 1111111245678888888777654 47999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||++|.... .....+.....++.|+.++.++++++.... .+.++++++||.... +|.. ....|
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~-~g~~----------~~~~y~ 149 (239)
T TIGR01830 81 VNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGL-MGNA----------GQANYA 149 (239)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCcccc-CCCC----------CCchhH
Confidence 999997532 223456677889999999999988876420 245689999996541 4421 23456
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+.. ..++.+++++|+.+.++.......... .......+ ...+.+++|++.+++.++..
T Consensus 150 ~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~~~~~~a~~~~~~~~~ 222 (239)
T TIGR01830 150 ASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVK-KKILSQIP------LGRFGTPEEVANAVAFLASD 222 (239)
T ss_pred HHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHH-HHHHhcCC------cCCCcCHHHHHHHHHHHhCc
Confidence 566555444433332 258999999999886653221111000 01111111 12366899999999988865
Q ss_pred CC---CCceEEeeCC
Q 020476 242 PS---YRGVINGTAP 253 (325)
Q Consensus 242 ~~---~~~~~~~~~~ 253 (325)
.. .+.+||+.++
T Consensus 223 ~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 223 EASYITGQVIHVDGG 237 (239)
T ss_pred ccCCcCCCEEEeCCC
Confidence 32 3348888765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=7.4e-16 Score=129.58 Aligned_cols=214 Identities=14% Similarity=0.086 Sum_probs=140.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||..+++.|+++|++|++++|+..+...... .........+|+.+.+.+.++++ ++|
T Consensus 5 ~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (253)
T PRK08217 5 DKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQLN 84 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998654322111 01111134678888877765543 479
Q ss_pred EEEECCCCCCC------------CCCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCc
Q 020476 89 AVVNLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETE 152 (325)
Q Consensus 89 ~vi~~a~~~~~------------~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~ 152 (325)
+|||+||.... .....+.....+++|+.++..+.+.+. +. .....++++||... ++..
T Consensus 85 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~-~~~~~iv~~ss~~~--~~~~--- 158 (253)
T PRK08217 85 GLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIES-GSKGVIINISSIAR--AGNM--- 158 (253)
T ss_pred EEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCeEEEEEccccc--cCCC---
Confidence 99999986421 223445667788899998876654332 21 13356888888765 5532
Q ss_pred eecCCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeecc
Q 020476 153 VFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 153 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
....| .+|...+.....+.. ..+++++.++|+.+.++..... ..... ......+ ...+.+
T Consensus 159 -------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~ 223 (253)
T PRK08217 159 -------GQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALE--RLEKMIP------VGRLGE 223 (253)
T ss_pred -------CCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHH--HHHhcCC------cCCCcC
Confidence 23457 677666655554443 2589999999999987743221 11111 1111112 234678
Q ss_pred HHHHHHHHHHHHcCCCCCc-eEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPSYRG-VINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~~~~-~~~~~~~~ 254 (325)
++|+++++..++......| +|++.++.
T Consensus 224 ~~~~a~~~~~l~~~~~~~g~~~~~~gg~ 251 (253)
T PRK08217 224 PEEIAHTVRFIIENDYVTGRVLEIDGGL 251 (253)
T ss_pred HHHHHHHHHHHHcCCCcCCcEEEeCCCc
Confidence 9999999999997654344 88888764
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=128.20 Aligned_cols=219 Identities=16% Similarity=0.128 Sum_probs=136.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCccccc----CCCCCccccCceeecCCchhHhhh----------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCI---------- 84 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~---------- 84 (325)
.++++||||+|+||.+++++|++.|++|.+..+ +.+..... ...........+|+.+.+.+..++
T Consensus 4 ~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (252)
T PRK12747 4 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 83 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhhh
Confidence 468999999999999999999999999988753 33322111 111111112346777766544322
Q ss_pred ---CCCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 85 ---QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 85 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
.++|++||+||.... .+...+.++..+++|+.++..+++++........++|++||... +...
T Consensus 84 ~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~--------- 152 (252)
T PRK12747 84 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RISL--------- 152 (252)
T ss_pred cCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc--ccCC---------
Confidence 168999999996422 22344557788899999999988876653223368999999876 3211
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+....| .+|...+.....+..+ .++++..+.||.+.++....... .+....... .......+.+.+|++++
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~dva~~ 227 (252)
T PRK12747 153 PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLS-DPMMKQYAT----TISAFNRLGEVEDIADT 227 (252)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhccc-CHHHHHHHH----hcCcccCCCCHHHHHHH
Confidence 223467 7777776665554443 48999999999998774211100 000100000 00011247889999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+..+++... ..| .+.+.++.
T Consensus 228 ~~~l~s~~~~~~~G~~i~vdgg~ 250 (252)
T PRK12747 228 AAFLASPDSRWVTGQLIDVSGGS 250 (252)
T ss_pred HHHHcCccccCcCCcEEEecCCc
Confidence 999887543 334 66666553
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.7e-16 Score=130.70 Aligned_cols=218 Identities=12% Similarity=0.072 Sum_probs=139.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++|+||||+|+||+++++.|++.|++|+++.|+++........ ........+|+.+.+++.++++ +
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4457999999999999999999999999999999987553322110 0111244578888888777664 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C--------CCCCEEEEeeeeeeeecCCCCce
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E--------GVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~--------~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
+|+|||+|+.... .....+.+...+++|+.++..+++++.... . ..+++|++||... +..
T Consensus 87 ~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~----- 159 (258)
T PRK06949 87 IDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAG--LRV----- 159 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccc--cCC-----
Confidence 8999999996422 122345677889999999988887664210 1 1358999998765 321
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+....| .+|...+.....+..+ .++++++++||+++++....... ......... .+. ...+...+
T Consensus 160 ----~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~-~~~~~~~~~-~~~----~~~~~~p~ 229 (258)
T PRK06949 160 ----LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWE-TEQGQKLVS-MLP----RKRVGKPE 229 (258)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccC-hHHHHHHHh-cCC----CCCCcCHH
Confidence 1223457 5676665555544433 48999999999999875321100 011111110 011 12356679
Q ss_pred HHHHHHHHHHcCCC--CCc-eEEeeC
Q 020476 230 DIVNLIYEALSNPS--YRG-VINGTA 252 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~-~~~~~~ 252 (325)
|+++++..++..+. ..| ...+.+
T Consensus 230 ~~~~~~~~l~~~~~~~~~G~~i~~dg 255 (258)
T PRK06949 230 DLDGLLLLLAADESQFINGAIISADD 255 (258)
T ss_pred HHHHHHHHHhChhhcCCCCcEEEeCC
Confidence 99999999987543 345 444443
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.9e-16 Score=129.93 Aligned_cols=195 Identities=15% Similarity=0.108 Sum_probs=131.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC----CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ----GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~----~~d~v 90 (325)
||+++||||+|+||.++++.|+++|++|++++|++++....... .....+..+|+.|.+++.++++ ++|+|
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~v 80 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIV 80 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEE
Confidence 56999999999999999999999999999999987654322110 0111244678889888877654 47999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||++|.... .....+.....+++|+.++..+++++... ..+.+++|++||.... ++. +....|
T Consensus 81 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~Y~ 149 (243)
T PRK07102 81 LIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGD-RGR----------ASNYVYG 149 (243)
T ss_pred EECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEeccccc-CCC----------CCCcccH
Confidence 999986432 22234455677889999988888776431 0356789999987531 221 123346
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+.. ..+++++.++|+.+.++..... ... .......+|++++++.+++.
T Consensus 150 ~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~~-------------~~~----~~~~~~~~~~a~~i~~~~~~ 212 (243)
T PRK07102 150 SAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAGL-------------KLP----GPLTAQPEEVAKDIFRAIEK 212 (243)
T ss_pred HHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhcc-------------CCC----ccccCCHHHHHHHHHHHHhC
Confidence 566655544444322 3589999999999987621100 000 11257789999999999986
Q ss_pred C
Q 020476 242 P 242 (325)
Q Consensus 242 ~ 242 (325)
+
T Consensus 213 ~ 213 (243)
T PRK07102 213 G 213 (243)
T ss_pred C
Confidence 5
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=4.4e-16 Score=133.53 Aligned_cols=195 Identities=11% Similarity=0.069 Sum_probs=131.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++|+||||+|+||.++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~id 119 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGVD 119 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 36899999999999999999999999999999986543222110 0111234578889888877765 789
Q ss_pred EEEECCCCCCCCCC-----ChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 89 AVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 89 ~vi~~a~~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+||||||....... ..+.....+++|+.++..+++++ ++ .+.+++|++||.++ ++. ..+
T Consensus 120 ~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~~--------~~p 187 (293)
T PRK05866 120 ILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLE--RGDGHIINVATWGV--LSE--------ASP 187 (293)
T ss_pred EEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCcEEEEECChhh--cCC--------CCC
Confidence 99999997533221 12345677889998877776654 34 45679999999765 321 112
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .+++++.++||.+-.+..... . . .. ....+..+++|+.+
T Consensus 188 ~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~---------~---~-~~---~~~~~~pe~vA~~~ 251 (293)
T PRK05866 188 LFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT---------K---A-YD---GLPALTADEAAEWM 251 (293)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc---------c---c-cc---CCCCCCHHHHHHHH
Confidence 34467 6777666555444332 489999999997765531100 0 0 00 11247899999999
Q ss_pred HHHHcCC
Q 020476 236 YEALSNP 242 (325)
Q Consensus 236 ~~~~~~~ 242 (325)
+.+++++
T Consensus 252 ~~~~~~~ 258 (293)
T PRK05866 252 VTAARTR 258 (293)
T ss_pred HHHHhcC
Confidence 9999865
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.3e-16 Score=134.64 Aligned_cols=216 Identities=15% Similarity=0.120 Sum_probs=140.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||+++++.|+++|++|++++|+.+....... .........+|+.|.+.+.++++ ++
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 34689999999999999999999999999999998654322211 01111134678888887766543 68
Q ss_pred CEEEECCCCCCC------------------CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeee
Q 020476 88 TAVVNLAGTPIG------------------TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGY 145 (325)
Q Consensus 88 d~vi~~a~~~~~------------------~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~ 145 (325)
|++||+||.... .+...+.+...+++|+.++..+++ .+++ .+.+++|++||...
T Consensus 89 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~ii~isS~~~-- 164 (278)
T PRK08277 89 DILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVG--RKGGNIINISSMNA-- 164 (278)
T ss_pred CEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCcEEEEEccchh--
Confidence 999999995422 123355677888999998775544 4444 34578999999876
Q ss_pred ecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-----chHHHH-HHHcCCC
Q 020476 146 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-----KMIPLF-MMFAGGP 215 (325)
Q Consensus 146 ~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-----~~~~~~-~~~~~~~ 215 (325)
+... +....| .+|...+.....+..+ .++++..++||.+..+...... ...... .....
T Consensus 165 ~~~~---------~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~-- 233 (278)
T PRK08277 165 FTPL---------TKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERANKILAH-- 233 (278)
T ss_pred cCCC---------CCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHHHHhcc--
Confidence 4321 224457 6777666665555443 3899999999999887421100 000000 11111
Q ss_pred CCCCcceeeeccHHHHHHHHHHHHcC-CC--CCc-eEEeeCC
Q 020476 216 LGSGQQWFSWIHLDDIVNLIYEALSN-PS--YRG-VINGTAP 253 (325)
Q Consensus 216 ~~~~~~~~~~v~v~D~a~a~~~~~~~-~~--~~~-~~~~~~~ 253 (325)
....-+...+|+|++++.++.. .. ..| ++.+.+|
T Consensus 234 ----~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 234 ----TPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred ----CCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 1122367889999999998876 32 344 6666655
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=128.80 Aligned_cols=219 Identities=12% Similarity=0.079 Sum_probs=141.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...+++|||||+|+||.++++.|++.|++|+++.|+. +..... .......+..+|+.+.+.+.++++ +
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHGT-NWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCc-HHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3457899999999999999999999999999999873 211111 101111244678888888776665 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++||+||.... .....+.++..+++|+.++..+.+++... ..+.+++|++||... +... +..
T Consensus 92 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~ 160 (258)
T PRK06935 92 IDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLS--FQGG---------KFV 160 (258)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHh--ccCC---------CCc
Confidence 8999999996432 22345567788899999976666554321 045578999999865 3211 123
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccch-HHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
+.| .+|...+.....+..+ .|++++.++||.+..+........ ..........+ ...+...+|++.++.
T Consensus 161 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~ 234 (258)
T PRK06935 161 PAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIP------AGRWGEPDDLMGAAV 234 (258)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence 467 6777766666555553 489999999999887642111000 00011111111 123678899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.+.. ..| ++.+.++.
T Consensus 235 ~l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 235 FLASRASDYVNGHILAVDGGW 255 (258)
T ss_pred HHcChhhcCCCCCEEEECCCe
Confidence 9887543 234 66666653
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.2e-15 Score=127.93 Aligned_cols=217 Identities=18% Similarity=0.093 Sum_probs=132.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
|+++|+||||+|+||..+++.|+++|++|+++.+ +++...... .......+..+|+.|.+++.++++ +
T Consensus 1 m~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGR 80 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 4679999999999999999999999999987654 333221111 001111245688888887765543 6
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHh-cCC-CC---CCCEEEEeeeeeeeecCCCCceecCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLIN-ESP-EG---VRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~-~~~-~~---~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
+|+|||+||.... .+...+.....+++|+.++..+++++. ... .+ ..++|++||.... ++...
T Consensus 81 id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~-~~~~~------- 152 (248)
T PRK06947 81 LDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASR-LGSPN------- 152 (248)
T ss_pred CCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhc-CCCCC-------
Confidence 8999999996422 233445567788999999887765433 210 11 2459999987541 33211
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHH-cCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a 232 (325)
....| .+|...+.....+..+ .+++++++|||.+..+....... ....... ...+. --....+|++
T Consensus 153 --~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~------~~~~~~e~va 223 (248)
T PRK06947 153 --EYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQ-PGRAARLGAQTPL------GRAGEADEVA 223 (248)
T ss_pred --CCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCC-HHHHHHHhhcCCC------CCCcCHHHHH
Confidence 12346 6676666555444433 38999999999998774211100 0111111 11111 1146789999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeC
Q 020476 233 NLIYEALSNPS--YRG-VINGTA 252 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~ 252 (325)
+.++.+++++. ..| .+.+.+
T Consensus 224 ~~~~~l~~~~~~~~~G~~~~~~g 246 (248)
T PRK06947 224 ETIVWLLSDAASYVTGALLDVGG 246 (248)
T ss_pred HHHHHHcCccccCcCCceEeeCC
Confidence 99999988754 344 445544
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=6.5e-16 Score=130.57 Aligned_cols=221 Identities=13% Similarity=0.031 Sum_probs=140.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~------~~ 87 (325)
..++++||||+|.||.++++.|+++|++|++++|+.++....... ........+|+.|++++.++++ ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 456899999999999999999999999999999986543221110 0011244689999988877664 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHH----HHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++||+||.... .+.+.+.++..+++|+.+... ++..+++ .+.+++|++||... +.. .+.
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~--~~~g~Ii~isS~~~--~~~---------~~~ 153 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMER--KGFGRIIYSTSVAI--KEP---------IPN 153 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEEcCccc--cCC---------CCc
Confidence 999999996432 234567788889999877554 4555555 45578999999865 321 112
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-------ch--HHHHHHHcCCCCCCCcceeeecc
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-------KM--IPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
...| .+|...+........+ .|+++..+.||.+..+...... .. -....... .......+..
T Consensus 154 ~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~p~~r~~~ 228 (263)
T PRK08339 154 IALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYA-----KPIPLGRLGE 228 (263)
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHh-----ccCCcccCcC
Confidence 3346 5666555554444443 4899999999998765210000 00 00001000 0111123678
Q ss_pred HHHHHHHHHHHHcCCC--CCc-eEEeeCCCCCC
Q 020476 228 LDDIVNLIYEALSNPS--YRG-VINGTAPNPVR 257 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~s 257 (325)
.+|++.++..++.... ..| ++.+.++...|
T Consensus 229 p~dva~~v~fL~s~~~~~itG~~~~vdgG~~~~ 261 (263)
T PRK08339 229 PEEIGYLVAFLASDLGSYINGAMIPVDGGRLNS 261 (263)
T ss_pred HHHHHHHHHHHhcchhcCccCceEEECCCcccc
Confidence 8999999999987543 344 66676665444
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.3e-16 Score=128.61 Aligned_cols=214 Identities=18% Similarity=0.098 Sum_probs=143.1
Q ss_pred EEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC---CCCEEEECCCCC
Q 020476 24 SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP 97 (325)
Q Consensus 24 lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~~~ 97 (325)
+||||+|+||++++++|+++|++|++++|+++....... ......+..+|+.|.+++.++++ ++|++||++|..
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~id~li~~ag~~ 80 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEAGPFDHVVITAADT 80 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhcCCCCEEEECCCCC
Confidence 699999999999999999999999999998654332111 01111244689999999988875 479999999974
Q ss_pred CCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHH
Q 020476 98 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE 173 (325)
Q Consensus 98 ~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~ 173 (325)
... +...+.....+++|+.++.++.++... .+.+++|++||... +.. .+..+.| .+|...+..
T Consensus 81 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~g~iv~~ss~~~--~~~---------~~~~~~Y~~sK~a~~~~ 147 (230)
T PRK07041 81 PGGPVRALPLAAAQAAMDSKFWGAYRVARAARI--APGGSLTFVSGFAA--VRP---------SASGVLQGAINAALEAL 147 (230)
T ss_pred CCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh--cCCeEEEEECchhh--cCC---------CCcchHHHHHHHHHHHH
Confidence 321 234566788899999999999996654 45679999999876 432 1234557 667666665
Q ss_pred HHHHhhcC-CceEEEEEeceEEcCCCCcc-c-chHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCC-ceE
Q 020476 174 GTALKVNK-DVRLALIRIGIVLGKDGGAL-A-KMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVI 248 (325)
Q Consensus 174 ~~~~~~~~-~~~~~ilRp~~i~g~~~~~~-~-~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~-~~~ 248 (325)
...+..+. +++++.++|+.+-.+..... . ....... .....+. ..+...+|+|+++..+++.+... .+|
T Consensus 148 ~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~l~~~~~~~G~~~ 221 (230)
T PRK07041 148 ARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPA------RRVGQPEDVANAILFLAANGFTTGSTV 221 (230)
T ss_pred HHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhcCCCcCCcEE
Confidence 55544432 58899999998765421100 0 0011111 1111111 12457899999999999876544 488
Q ss_pred EeeCCCCC
Q 020476 249 NGTAPNPV 256 (325)
Q Consensus 249 ~~~~~~~~ 256 (325)
++.++.++
T Consensus 222 ~v~gg~~~ 229 (230)
T PRK07041 222 LVDGGHAI 229 (230)
T ss_pred EeCCCeec
Confidence 88887643
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.5e-15 Score=127.65 Aligned_cols=216 Identities=17% Similarity=0.060 Sum_probs=140.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||.+++++|++.|++|++++|+.......... ........+|+.+.+++.++++ .+
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 86 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL 86 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999999999999976543221111 1011134578888887765543 58
Q ss_pred CEEEECCCCCC----CCCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|+|||+|+... ......+.....+++|+.++..+++++ ++ .+.++++++||... +.. .+
T Consensus 87 d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~iv~~sS~~~--~~~---------~~ 153 (252)
T PRK07035 87 DILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKE--QGGGSIVNVASVNG--VSP---------GD 153 (252)
T ss_pred CEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--CCCcEEEEECchhh--cCC---------CC
Confidence 99999998531 123445567788999999988777665 44 45678999988654 211 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .|++++.+.||.+..+.......-.... ......+ ...+...+|++++
T Consensus 154 ~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~ 227 (252)
T PRK07035 154 FQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIP------LRRHAEPSEMAGA 227 (252)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCC------CCCcCCHHHHHHH
Confidence 34567 7787777666665543 3899999999988665321110000111 1111111 1236678999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCC
Q 020476 235 IYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+..++.+.. ..| ++.+.++
T Consensus 228 ~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 228 VLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred HHHHhCccccCccCCEEEeCCC
Confidence 999987653 344 6666554
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=139.41 Aligned_cols=178 Identities=15% Similarity=0.083 Sum_probs=117.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+++++||||+|+||.++++.|+++|++|++++|+..+....... .....+..+|+.|.+++.++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 456899999999999999999999999999999976543221110 0111244678889888876664 48
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--CCCEEEEeeeeeeeecCCCC---cee--
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--VRPSVLVSATALGYYGTSET---EVF-- 154 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~~~~v~~Ss~~v~~~g~~~~---~~~-- 154 (325)
|+|||+||.... ...+.+..+..+++|+.++..+++++.... .+ .+|+|++||.... ++...+ .+.
T Consensus 85 D~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~-~~~~~~~~~~~~~~ 163 (322)
T PRK07453 85 DALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTAN-PKELGGKIPIPAPA 163 (322)
T ss_pred cEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccC-ccccCCccCCCCcc
Confidence 999999996422 233556778889999999888877665310 22 3589999997652 211000 000
Q ss_pred ------------------cCCC--CCCCch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCC
Q 020476 155 ------------------DESS--PSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKD 197 (325)
Q Consensus 155 ------------------~e~~--~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~ 197 (325)
.+.. .+...| .+|...+.....+.++ .++.++.++||+|++.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~ 231 (322)
T PRK07453 164 DLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADTP 231 (322)
T ss_pred chhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCCc
Confidence 0011 123457 7787665544444433 47999999999998643
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=5.4e-16 Score=131.02 Aligned_cols=219 Identities=14% Similarity=0.054 Sum_probs=141.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|+||.++++.|+++|++|++++|+++........ ........+|+.|++++.++++ .
T Consensus 7 ~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 86 (260)
T PRK07063 7 GKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFGP 86 (260)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 46899999999999999999999999999999976543322110 1111134578888887776654 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++||+||.... .....+.+...+++|+.++..+++++... ..+.+++|++||... +.. .+..
T Consensus 87 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~ 155 (260)
T PRK07063 87 LDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHA--FKI---------IPGC 155 (260)
T ss_pred CcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhh--ccC---------CCCc
Confidence 8999999996422 22345677888999999988877765421 034568999999765 221 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-cc---chHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LA---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..| .+|...+.....+..+ .|+++..++||.+-.+-... +. ...... ......|. .-+...+|++
T Consensus 156 ~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~r~~~~~~va 229 (260)
T PRK07063 156 FPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPM------KRIGRPEEVA 229 (260)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCC------CCCCCHHHHH
Confidence 457 6777666666555443 48999999999886553110 00 000001 11111111 1256789999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
.+++.++.+.. ..| .+.+.+|..
T Consensus 230 ~~~~fl~s~~~~~itG~~i~vdgg~~ 255 (260)
T PRK07063 230 MTAVFLASDEAPFINATCITIDGGRS 255 (260)
T ss_pred HHHHHHcCccccccCCcEEEECCCee
Confidence 99999987643 344 666666643
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=8.2e-16 Score=128.97 Aligned_cols=195 Identities=14% Similarity=0.151 Sum_probs=131.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
+++++||||+|+||++++++|+++|++|++++|++.+....... .....+..+|+.|.+++.++++ +
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999999999999987543322110 1111234678888887766543 6
Q ss_pred CCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+|||+||..... ....+.....+++|+.++..+++++... ..+.+++|++||.... +|.. ...
T Consensus 82 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~~---------~~~ 151 (248)
T PRK08251 82 LDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAV-RGLP---------GVK 151 (248)
T ss_pred CCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc-cCCC---------CCc
Confidence 89999999975332 2234456678889999988887765321 0456789999997641 3311 113
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .++++++++|+++.++..... . . ....+..+|.|++++.
T Consensus 152 ~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~---------------~--~-~~~~~~~~~~a~~i~~ 213 (248)
T PRK08251 152 AAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKA---------------K--S-TPFMVDTETGVKALVK 213 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhcc---------------c--c-CCccCCHHHHHHHHHH
Confidence 456 6676655544444432 479999999999876532110 0 0 1125789999999999
Q ss_pred HHcCC
Q 020476 238 ALSNP 242 (325)
Q Consensus 238 ~~~~~ 242 (325)
+++.+
T Consensus 214 ~~~~~ 218 (248)
T PRK08251 214 AIEKE 218 (248)
T ss_pred HHhcC
Confidence 99765
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.7e-15 Score=122.72 Aligned_cols=189 Identities=19% Similarity=0.134 Sum_probs=132.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~~~ 97 (325)
|+++||||+|.||.+++++|+++ ++|++++|+.. ...+|+.|.++++++++ ++|+|||+||..
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~~ 66 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-------------DVQVDITDPASIRALFEKVGKVDAVVSAAGKV 66 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-------------ceEecCCChHHHHHHHHhcCCCCEEEECCCCC
Confidence 58999999999999999999998 99999999753 23479999998887765 689999999964
Q ss_pred CC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHH
Q 020476 98 IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE 173 (325)
Q Consensus 98 ~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~ 173 (325)
.. .....+.+...+++|+.++.++.+++........+++++||... .. ..+....| .+|...+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~--~~---------~~~~~~~Y~~sK~a~~~~ 135 (199)
T PRK07578 67 HFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILS--DE---------PIPGGASAATVNGALEGF 135 (199)
T ss_pred CCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEccccc--CC---------CCCCchHHHHHHHHHHHH
Confidence 22 12345567778899999999998877642123357888887653 11 01223456 667666655
Q ss_pred HHHHhh--cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe
Q 020476 174 GTALKV--NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 174 ~~~~~~--~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
.+.+.. ..++++..++||.+-.+.. . . +..+. ...++..+|+|+++..+++....+++|++
T Consensus 136 ~~~la~e~~~gi~v~~i~Pg~v~t~~~----~----~----~~~~~----~~~~~~~~~~a~~~~~~~~~~~~g~~~~~ 198 (199)
T PRK07578 136 VKAAALELPRGIRINVVSPTVLTESLE----K----Y----GPFFP----GFEPVPAARVALAYVRSVEGAQTGEVYKV 198 (199)
T ss_pred HHHHHHHccCCeEEEEEcCCcccCchh----h----h----hhcCC----CCCCCCHHHHHHHHHHHhccceeeEEecc
Confidence 554444 3589999999998754311 0 0 00011 12368999999999999987655556654
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.2e-16 Score=129.62 Aligned_cols=220 Identities=12% Similarity=0.074 Sum_probs=140.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|.||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ .+|++|
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~lv 85 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDILV 85 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999999999987543222111 1111244689999988876654 579999
Q ss_pred ECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 92 NLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 92 ~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
|+||.... .....+.+...+++|+.++..+++++.... ...+++|++||.... ++. +....| .+|
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~-~~~----------~~~~~Y~asK 154 (261)
T PRK08265 86 NLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAK-FAQ----------TGRWLYPASK 154 (261)
T ss_pred ECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhc-cCC----------CCCchhHHHH
Confidence 99996422 233456778889999999888887765321 234689999987651 221 123456 666
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
...+........+ .+++++.++||.+..+....... ......... .. ......+...+|+|+++..+++...
T Consensus 155 aa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~-~~---~~p~~r~~~p~dva~~~~~l~s~~~ 230 (261)
T PRK08265 155 AAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVA-AP---FHLLGRVGDPEEVAQVVAFLCSDAA 230 (261)
T ss_pred HHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhh-cc---cCCCCCccCHHHHHHHHHHHcCccc
Confidence 6555555444432 48999999999887653111000 000000000 00 0111225678999999999997643
Q ss_pred --CCc-eEEeeCCC
Q 020476 244 --YRG-VINGTAPN 254 (325)
Q Consensus 244 --~~~-~~~~~~~~ 254 (325)
..| ++.+.++.
T Consensus 231 ~~~tG~~i~vdgg~ 244 (261)
T PRK08265 231 SFVTGADYAVDGGY 244 (261)
T ss_pred cCccCcEEEECCCe
Confidence 334 67776663
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-15 Score=124.60 Aligned_cols=215 Identities=14% Similarity=0.083 Sum_probs=138.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
|+++++||||+|.||+++++.|+++|++|++++|++........... .....+|+.|.+++.++++ ++|++|
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv 79 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAG-AQCIQADFSTNAGIMAFIDELKQHTDGLRAII 79 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcC-CEEEEcCCCCHHHHHHHHHHHHhhCCCccEEE
Confidence 35689999999999999999999999999999998754221111000 1134678888887766543 489999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--CCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--VRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|+||.... .....+..+..+++|+.++..+.+.+.... .+ ..++|++||... .. ..+....|
T Consensus 80 ~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~--~~---------~~~~~~~Y 148 (236)
T PRK06483 80 HNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVV--EK---------GSDKHIAY 148 (236)
T ss_pred ECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhh--cc---------CCCCCccH
Confidence 99986422 223456778889999998876655554320 22 357999988654 11 11223467
Q ss_pred -HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+..+. ++++..++||.+...... ...... ......++. -+...+|+++++..++..
T Consensus 149 ~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~-~~~~~~--~~~~~~~~~------~~~~~~~va~~~~~l~~~ 219 (236)
T PRK06483 149 AASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGD-DAAYRQ--KALAKSLLK------IEPGEEEIIDLVDYLLTS 219 (236)
T ss_pred HHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCC-CHHHHH--HHhccCccc------cCCCHHHHHHHHHHHhcC
Confidence 77877777766665543 599999999988543211 111111 111111211 145689999999999975
Q ss_pred CCCCc-eEEeeCCC
Q 020476 242 PSYRG-VINGTAPN 254 (325)
Q Consensus 242 ~~~~~-~~~~~~~~ 254 (325)
....| ++.+.++.
T Consensus 220 ~~~~G~~i~vdgg~ 233 (236)
T PRK06483 220 CYVTGRSLPVDGGR 233 (236)
T ss_pred CCcCCcEEEeCccc
Confidence 44444 66666554
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.3e-15 Score=128.15 Aligned_cols=219 Identities=14% Similarity=0.077 Sum_probs=141.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|.||.++++.|+++|++|++++|+.++...... .........+|+.|++++.++++ ++
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999999999998654332211 01111234578888888776653 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|++|||||.... .....+.....+++|+.++..+++++.... .+ .+++|++||.... .+.. .+..
T Consensus 88 d~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~-~~~~--------~~~~ 158 (253)
T PRK05867 88 DIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGH-IINV--------PQQV 158 (253)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhc-CCCC--------CCCc
Confidence 999999997532 223455677788999999888888764310 12 2468888876431 1100 0112
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .|+++..++||.+-.+.......... ......+. ..+...+|+|+++..
T Consensus 159 ~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va~~~~~ 230 (253)
T PRK05867 159 SHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQP--LWEPKIPL------GRLGRPEELAGLYLY 230 (253)
T ss_pred cchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHHH--HHHhcCCC------CCCcCHHHHHHHHHH
Confidence 457 6777776666655543 48999999999997663221111111 11111222 236789999999999
Q ss_pred HHcCCC--CCc-eEEeeCCC
Q 020476 238 ALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~~ 254 (325)
++.... ..| ++.+.+|.
T Consensus 231 L~s~~~~~~tG~~i~vdgG~ 250 (253)
T PRK05867 231 LASEASSYMTGSDIVIDGGY 250 (253)
T ss_pred HcCcccCCcCCCeEEECCCc
Confidence 997543 334 67676664
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.2e-16 Score=134.52 Aligned_cols=208 Identities=14% Similarity=0.070 Sum_probs=135.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+++|+||||+|.||.+++++|+++|++|++++|+++....... .........+|+.|.+++.++++ .+|
T Consensus 8 ~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~iD 87 (334)
T PRK07109 8 RQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPID 87 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCCC
Confidence 4689999999999999999999999999999998654332211 11111244689999988877653 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHH----HHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++||+||.... .+...+.....+++|+.+... +++.+++ .+.+++|++||... +... +..
T Consensus 88 ~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~--~~~g~iV~isS~~~--~~~~---------~~~ 154 (334)
T PRK07109 88 TWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRP--RDRGAIIQVGSALA--YRSI---------PLQ 154 (334)
T ss_pred EEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEeCChhh--ccCC---------Ccc
Confidence 99999996422 233455667778888776554 5555555 45678999999876 4321 223
Q ss_pred Cch-HHHHHHHHHHHHHhh-----cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...+.....+.. ..++.+++++|+.+..+.... ....... .......+...+|+|+++
T Consensus 155 ~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~-------~~~~~~~---~~~~~~~~~~pe~vA~~i 224 (334)
T PRK07109 155 SAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDW-------ARSRLPV---EPQPVPPIYQPEVVADAI 224 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhh-------hhhhccc---cccCCCCCCCHHHHHHHH
Confidence 457 666655444333322 247999999999987653111 0000000 011122367899999999
Q ss_pred HHHHcCCCCCceEEeeC
Q 020476 236 YEALSNPSYRGVINGTA 252 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~ 252 (325)
+.+++++ ...+++++
T Consensus 225 ~~~~~~~--~~~~~vg~ 239 (334)
T PRK07109 225 LYAAEHP--RRELWVGG 239 (334)
T ss_pred HHHHhCC--CcEEEeCc
Confidence 9999876 33454543
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.6e-15 Score=127.46 Aligned_cols=213 Identities=15% Similarity=0.172 Sum_probs=135.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecC-CCcccccCC----CC--CccccCceeecCCchhHhhhC-------CC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~--~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++||||+|+||.++++.|+++|++|++++|+ .+....... .. .......+|+.|.+.+.++++ ++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 48999999999999999999999999999998 333221111 00 001123578889888766553 57
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhH----HHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIR----VTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~----~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+|||+||.... .+...+.....+++|+. .+..+++++++ .+.+++|++||... +... +.
T Consensus 81 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~~ss~~~--~~~~---------~~ 147 (251)
T PRK07069 81 SVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRA--SQPASIVNISSVAA--FKAE---------PD 147 (251)
T ss_pred cEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh--cCCcEEEEecChhh--ccCC---------CC
Confidence 999999997532 22234456677888987 67788888877 56689999999876 4322 22
Q ss_pred CCch-HHHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccc-hH--HHH-HHHcCCCCCCCcceeeeccHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAK-MI--PLF-MMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~-~~--~~~-~~~~~~~~~~~~~~~~~v~v~D 230 (325)
.+.| .+|...+.....+..+ .+++++.++|+.+.++....... .. ... ....+.+ ...+.+++|
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 221 (251)
T PRK07069 148 YTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVP------LGRLGEPDD 221 (251)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCC------CCCCcCHHH
Confidence 3457 6666555554443332 25899999999998874321100 00 001 1111111 123568999
Q ss_pred HHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 231 IVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 231 ~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
++++++.++..+. ..| .+.+.++
T Consensus 222 va~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 222 VAHAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHHHHHHHcCccccCccCCEEEECCC
Confidence 9999999876543 233 4444443
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.6e-15 Score=126.07 Aligned_cols=218 Identities=11% Similarity=0.076 Sum_probs=140.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-c-ccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-E-LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~-~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
..++++||||+|.||++++++|+++|++|++++|+.... . .............+|+.|.+++.++++ ++|+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~ 86 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI 86 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 456899999999999999999999999999998864321 1 111111111244689999988877664 5899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||||.... .....+.++..+++|+.++..+.+++.... .+ .+++|++||... +... +..+.
T Consensus 87 lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~ 155 (251)
T PRK12481 87 LINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLS--FQGG---------IRVPS 155 (251)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhh--cCCC---------CCCcc
Confidence 9999997532 233466788899999999887777654310 22 368999999865 3311 12345
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+.. ..|+++..++||.+-.+............ ......|. ..+...+|+++++..+
T Consensus 156 Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~peeva~~~~~L 229 (251)
T PRK12481 156 YTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPA------SRWGTPDDLAGPAIFL 229 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence 7 677776666555544 35899999999998765321110000000 11111121 1257889999999999
Q ss_pred HcCCC--CCc-eEEeeCC
Q 020476 239 LSNPS--YRG-VINGTAP 253 (325)
Q Consensus 239 ~~~~~--~~~-~~~~~~~ 253 (325)
+.... ..| ++.+.++
T Consensus 230 ~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 230 SSSASDYVTGYTLAVDGG 247 (251)
T ss_pred hCccccCcCCceEEECCC
Confidence 97533 334 5555544
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.69 E-value=2.9e-15 Score=126.33 Aligned_cols=218 Identities=12% Similarity=0.101 Sum_probs=140.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++||||+|.||+++++.|+++|++|++++|+.+........ ........+|+.+.+++.++++
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999999999999986543222110 0011133578888877655443
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|+|||+||.... .....+.....+.+|+.++..+++++... ..+.+++|++||... +... +.
T Consensus 88 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~--~~~~---------~~ 156 (257)
T PRK09242 88 GLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSG--LTHV---------RS 156 (257)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECcccc--CCCC---------CC
Confidence 68999999996321 23456677888999999998887776421 034578999999865 3321 22
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+.. ..+++++.++||.+.++............ ......++ .-+...+|++.++
T Consensus 157 ~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~ 230 (257)
T PRK09242 157 GAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPM------RRVGEPEEVAAAV 230 (257)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 3456 666665555554433 24899999999999877432110001111 11111111 1245789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCC
Q 020476 236 YEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~ 253 (325)
..++.... ..| .+.+.++
T Consensus 231 ~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 231 AFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred HHHhCcccccccCCEEEECCC
Confidence 99987532 234 5556544
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.3e-15 Score=126.43 Aligned_cols=194 Identities=13% Similarity=0.107 Sum_probs=127.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCc-ccc----cCCCC-CccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK-AEL----IFPGK-KTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~----~~~~~-~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..++|+||||+|.||.+++++|+++| ++|++++|++++ ... ..... .......+|+.|.+++.++++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~g 86 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAGG 86 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhcC
Confidence 45689999999999999999999985 899999998765 221 11111 011245688888887554443
Q ss_pred CCCEEEECCCCCCCCC--C-ChhhHHHHHHHhhHHHHH----HHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIGTR--W-SSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~~--~-~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++||++|...... + ......+.+++|+.++.. +++.+++ .+.+++|++||... +.. .
T Consensus 87 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~--~~~~~iv~isS~~g--~~~---------~ 153 (253)
T PRK07904 87 DVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA--QGFGQIIAMSSVAG--ERV---------R 153 (253)
T ss_pred CCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh--cCCceEEEEechhh--cCC---------C
Confidence 6999999998753211 1 112223468899987665 5667776 56689999999754 211 1
Q ss_pred CCCCch-HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+....| .+|.........+. ...++++++++||.+..+..... . . . ...+..+|+|+.
T Consensus 154 ~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~~----------~--~----~--~~~~~~~~~A~~ 215 (253)
T PRK07904 154 RSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAHA----------K--E----A--PLTVDKEDVAKL 215 (253)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhccC----------C--C----C--CCCCCHHHHHHH
Confidence 223456 56655443332222 23589999999999987521100 0 0 0 124788999999
Q ss_pred HHHHHcCCC
Q 020476 235 IYEALSNPS 243 (325)
Q Consensus 235 ~~~~~~~~~ 243 (325)
++..+.++.
T Consensus 216 i~~~~~~~~ 224 (253)
T PRK07904 216 AVTAVAKGK 224 (253)
T ss_pred HHHHHHcCC
Confidence 999998764
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=6e-15 Score=123.54 Aligned_cols=213 Identities=16% Similarity=0.086 Sum_probs=133.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+.++||||+|+||+++++.|++.|++|+++.++. ....... ..........+|+.|.+++.++++ ++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 36799999999999999999999999998865432 2111110 111101123578888887776553 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+||||||.... .....+.+...+++|+.++..+.++ +++ .+.+++|++||.... ++ .+.
T Consensus 83 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~~-~~----------~~~ 149 (246)
T PRK12938 83 DVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVE--RGWGRIINISSVNGQ-KG----------QFG 149 (246)
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCeEEEEEechhcc-CC----------CCC
Confidence 999999997532 2334566788899999996665444 444 456789999987541 22 122
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+.. ..++++..++|+.+.++..... ..... ...... ....+...+|+++++
T Consensus 150 ~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~--~~~~~~------~~~~~~~~~~v~~~~ 221 (246)
T PRK12938 150 QTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATI------PVRRLGSPDEIGSIV 221 (246)
T ss_pred ChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHH--HHHhcC------CccCCcCHHHHHHHH
Confidence 3456 566655444433332 2489999999999987642211 11111 111111 122356789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCC
Q 020476 236 YEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~ 253 (325)
..++..+. ..| .+.+.++
T Consensus 222 ~~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 222 AWLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHHcCcccCCccCcEEEECCc
Confidence 99887643 233 6666554
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.68 E-value=2.6e-15 Score=126.29 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=140.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++|+||||+|+||.+++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|
T Consensus 7 ~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~id 86 (253)
T PRK06172 7 GKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRLD 86 (253)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4699999999999999999999999999999998754322111 01111244678888887776654 569
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|||+||.... .....+.+...+++|+.++..++++ +.+ .+.+++|++||... +... +.
T Consensus 87 ~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~ii~~sS~~~--~~~~---------~~ 153 (253)
T PRK06172 87 YAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLA--QGGGAIVNTASVAG--LGAA---------PK 153 (253)
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEECchhh--ccCC---------CC
Confidence 99999996422 2334566778889999998666554 334 34578999999766 4321 22
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHHHHH-HHcCCCCCCCcceeeeccHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
...| .+|...+.....+..+ .++++..+.||.+-.+....... .-.... .....+ ...+...+|+++.
T Consensus 154 ~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~ia~~ 227 (253)
T PRK06172 154 MSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHP------VGRIGKVEEVASA 227 (253)
T ss_pred CchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCC------CCCccCHHHHHHH
Confidence 4557 6777666655555543 47999999999886653211100 000111 111111 1235789999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++.++.+.. ..| .+++.++.
T Consensus 228 ~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 228 VLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HHHHhCccccCcCCcEEEECCCc
Confidence 999997643 344 66666654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.2e-15 Score=128.89 Aligned_cols=219 Identities=15% Similarity=0.090 Sum_probs=141.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++|+||||+|+||.+++++|+++|++ |++++|+..+..... .......+..+|+.+++++.++++ ++
T Consensus 6 ~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (260)
T PRK06198 6 GKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGRL 85 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999998 999999765432111 111111134578888887776654 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|+|||+||.... .....+.....+++|+.++.++++++.+.. . ..+++|++||... ++.. +..
T Consensus 86 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~--~~~~---------~~~ 154 (260)
T PRK06198 86 DALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSA--HGGQ---------PFL 154 (260)
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCccc--ccCC---------CCc
Confidence 999999996532 123455567788999999998887764321 1 2357999998876 4422 123
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc----cch-HHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKM-IPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..| .+|...+.....+..+ .+++++.++|++++++..... ... ........ .......+++.+|++
T Consensus 155 ~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~a 229 (260)
T PRK06198 155 AAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAA-----ATQPFGRLLDPDEVA 229 (260)
T ss_pred chhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHh-----ccCCccCCcCHHHHH
Confidence 457 6777666655544432 479999999999988753110 000 01111111 011123468999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++..++.... .+.++.+.++.
T Consensus 230 ~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 230 RAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHHHHcChhhCCccCceEeECCcc
Confidence 99999986543 33366666654
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=8e-16 Score=128.19 Aligned_cols=213 Identities=16% Similarity=0.100 Sum_probs=134.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+.++|+||||+|+||.++++.|++.|++|++++|+++....... ......+..+|+.+.+.+.++++ ++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 34699999999999999999999999999999998764322211 00011244678888887776553 469
Q ss_pred EEEECCCCCCC-CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 89 AVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 89 ~vi~~a~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
.+||+++.... .....+.....++.|+.+...+++.+.......+++|++||.... ++. .+....| .+
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~-~~~---------~~~~~~Y~~s 153 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGI-YKA---------SPDQLSYAVA 153 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhc-ccC---------CCCchHHHHH
Confidence 99999985321 111224456677899988777777665431223578888886531 211 1223456 66
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|...+.....+..+ .+++++++||++++++..... .+... ... ....+..+|++++++.++..+.
T Consensus 154 K~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~-----~~~~~--~~~-----~~~~~~~~~va~~~~~~~~~~~ 221 (238)
T PRK05786 154 KAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER-----NWKKL--RKL-----GDDMAPPEDFAKVIIWLLTDEA 221 (238)
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh-----hhhhh--ccc-----cCCCCCHHHHHHHHHHHhcccc
Confidence 66555444443332 489999999999998742110 00000 000 1135778999999999997643
Q ss_pred --CCc-eEEeeCC
Q 020476 244 --YRG-VINGTAP 253 (325)
Q Consensus 244 --~~~-~~~~~~~ 253 (325)
..| .+.+.++
T Consensus 222 ~~~~g~~~~~~~~ 234 (238)
T PRK05786 222 DWVDGVVIPVDGG 234 (238)
T ss_pred cCccCCEEEECCc
Confidence 234 4455433
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4.6e-15 Score=125.69 Aligned_cols=222 Identities=13% Similarity=0.070 Sum_probs=143.8
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+....++++||||+|.||.+++++|+++|++|+++.|+.++...... .........+|+.|.+++.++++
T Consensus 6 ~~~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (265)
T PRK07097 6 FSLKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV 85 (265)
T ss_pred cCCCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC
Confidence 34445789999999999999999999999999999988755322211 11111234689999888776664
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
.+|+|||+||.... .....+.....+++|+.++..+.+++... ..+.+++|++||.... ++. +
T Consensus 86 ~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~ 154 (265)
T PRK07097 86 GVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSE-LGR----------E 154 (265)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCcccc-CCC----------C
Confidence 48999999997532 23455677888899999877666654321 0356789999987541 331 1
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc------hHHHHH-HHcCCCCCCCcceeeeccH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK------MIPLFM-MFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~------~~~~~~-~~~~~~~~~~~~~~~~v~v 228 (325)
....| .+|...+.....+..+ .+++++.++||.+..+....... ..+... .....+ ...+...
T Consensus 155 ~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 228 (265)
T PRK07097 155 TVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTP------AARWGDP 228 (265)
T ss_pred CCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCC------ccCCcCH
Confidence 23456 6776666655555544 48999999999998874221110 001111 011111 1236678
Q ss_pred HHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 229 DDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+|++..+..++.+.. ..| .+.+.++.
T Consensus 229 ~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 229 EDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 999999999997632 344 55666554
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=4e-15 Score=125.08 Aligned_cols=217 Identities=16% Similarity=0.099 Sum_probs=137.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
++++||||+|.||.++++.|+++|++|++++|+......... .........+|+.|++.+.++++ ++|+
T Consensus 2 k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (252)
T PRK07677 2 KVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRIDA 81 (252)
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence 689999999999999999999999999999998654322211 00111234678888887776553 5899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CC-CCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PE-GVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||+||.... ...+.+.+...+++|+.++.++++++.+. .. ..+++|++||... +... +....
T Consensus 82 lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~--~~~~---------~~~~~ 150 (252)
T PRK07677 82 LINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYA--WDAG---------PGVIH 150 (252)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhh--ccCC---------CCCcc
Confidence 9999985322 23456667889999999999998887431 01 2357888887743 2111 12335
Q ss_pred h-HHHHHHHHHHHHHhh----cCCceEEEEEeceEEcCCC-CcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~i~g~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
| .+|...+........ ..|+++..++||.+.+... ......-... ......++ ..+...+|+++++.
T Consensus 151 Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~~~~ 224 (252)
T PRK07677 151 SAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPL------GRLGTPEEIAGLAY 224 (252)
T ss_pred hHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCC------CCCCCHHHHHHHHH
Confidence 6 666665555444322 3489999999999985421 1100000111 11111111 23678899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.... ..| ++.+.++.
T Consensus 225 ~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 225 FLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HHcCccccccCCCEEEECCCe
Confidence 8886532 334 66666653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.6e-15 Score=124.20 Aligned_cols=218 Identities=16% Similarity=0.067 Sum_probs=138.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc---cCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|+||+++++.|+++|++|++++|+...... ............+|+.+.+++.++++ .+|+
T Consensus 6 ~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id~ 85 (263)
T PRK08226 6 GKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRIDI 85 (263)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999999999999999999999999997642111 11101111244688888887776654 5799
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||+||.... .....+..+..+++|+.++..+++++... ..+.+++|++||......+ .+....|
T Consensus 86 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~----------~~~~~~Y 155 (263)
T PRK08226 86 LVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVA----------DPGETAY 155 (263)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccC----------CCCcchH
Confidence 9999996422 23345556778899999998888876431 0345689999886431011 1223456
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc------cchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.+|...+.....+..+ .+++++.++||.+.++-.... ....... ......|. ..+...+|+++
T Consensus 156 ~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~~va~ 229 (263)
T PRK08226 156 ALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPL------RRLADPLEVGE 229 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCC------CCCCCHHHHHH
Confidence 6676666555555443 389999999999987621100 0000111 11111121 23568999999
Q ss_pred HHHHHHcCC--CCCc-eEEeeCC
Q 020476 234 LIYEALSNP--SYRG-VINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~--~~~~-~~~~~~~ 253 (325)
++..++... ...| ++.+.++
T Consensus 230 ~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 230 LAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred HHHHHcCchhcCCcCceEeECCC
Confidence 998888643 2344 5555555
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.1e-15 Score=130.04 Aligned_cols=201 Identities=11% Similarity=0.063 Sum_probs=134.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh-------CCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------QGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~-------~~~d 88 (325)
.++++||||+|.||++++++|+++|++|++++|+++....... .........+|+.|.+++.+++ .++|
T Consensus 7 ~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 86 (330)
T PRK06139 7 GAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRID 86 (330)
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998765432211 1111113457999998887766 3689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++|||||.... .+...+.....+++|+.++.++.+++ ++ .+..++|++||... +.. .|..
T Consensus 87 ~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~--~~~g~iV~isS~~~--~~~---------~p~~ 153 (330)
T PRK06139 87 VWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKK--QGHGIFINMISLGG--FAA---------QPYA 153 (330)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHH--cCCCEEEEEcChhh--cCC---------CCCc
Confidence 99999996533 22334566778999999887766654 44 34568999988765 321 1223
Q ss_pred Cch-HHHHHHHHHHHHHhh----cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|.......+.+.. ..++.++.+.|+.+.++........ .+... .......+.+|+|++++
T Consensus 154 ~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~~~-------~~~~~---~~~~~~~~pe~vA~~il 223 (330)
T PRK06139 154 AAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGANY-------TGRRL---TPPPPVYDPRRVAKAVV 223 (330)
T ss_pred hhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccccc-------ccccc---cCCCCCCCHHHHHHHHH
Confidence 457 667654433333322 2379999999999988743211110 00000 11123678999999999
Q ss_pred HHHcCCC
Q 020476 237 EALSNPS 243 (325)
Q Consensus 237 ~~~~~~~ 243 (325)
.+++++.
T Consensus 224 ~~~~~~~ 230 (330)
T PRK06139 224 RLADRPR 230 (330)
T ss_pred HHHhCCC
Confidence 9998764
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.8e-16 Score=128.08 Aligned_cols=165 Identities=13% Similarity=0.125 Sum_probs=113.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----------~~d 88 (325)
||+++||||+|+||.+++++|+++|++|++++|+..+... ........+..+|+.|.+++.+++. .+|
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSLA-AAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRV 79 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhhh-hccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCce
Confidence 5799999999999999999999999999999998654211 1111111244688888887776331 479
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
++||||+.... .....+.....+++|+.++..+.+.+.+.. .+.+++|++||... +... +...
T Consensus 80 ~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~ 148 (243)
T PRK07023 80 LLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAA--RNAY---------AGWS 148 (243)
T ss_pred EEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhh--cCCC---------CCch
Confidence 99999986432 122455677888999999666555443210 44578999999865 3211 1234
Q ss_pred ch-HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcC
Q 020476 163 DY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGK 196 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~ 196 (325)
.| .+|...+.....+..+ .++++..++|+.+-.+
T Consensus 149 ~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 149 VYCATKAALDHHARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccH
Confidence 57 6777777666655543 5899999999987554
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.67 E-value=9.2e-15 Score=124.28 Aligned_cols=208 Identities=14% Similarity=0.085 Sum_probs=135.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-----------CCCCccccCceeecCCchhHhhhC--
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKTRFFPGVMIAEEPQWRDCIQ-- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~~~~~~~d~~d~~~~~~~~~-- 85 (325)
..++++||||+|+||.++++.|+++|++|++++|+.+...... ..........+|+.+++++.++++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 3468999999999999999999999999999999765321110 000111134589999988876654
Q ss_pred -----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceec
Q 020476 86 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 86 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++|+|||+||.... .....+.....+++|+.++.++++++.... .+..+++++||... .. .
T Consensus 85 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~--~~--~----- 155 (273)
T PRK08278 85 VERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPPLN--LD--P----- 155 (273)
T ss_pred HHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCchh--cc--c-----
Confidence 68999999997432 233455677889999999999988886421 23357888887532 11 0
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
...+....| .+|...+.....+..+ .+++++.+.|+.+.... ..... ..+. .....+...+|+
T Consensus 156 ~~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~------~~~~~--~~~~-----~~~~~~~~p~~v 222 (273)
T PRK08278 156 KWFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATA------AVRNL--LGGD-----EAMRRSRTPEIM 222 (273)
T ss_pred cccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccH------HHHhc--cccc-----ccccccCCHHHH
Confidence 001334567 7788777776666554 38999999998433221 00000 0000 111236788999
Q ss_pred HHHHHHHHcCCC--CCceE
Q 020476 232 VNLIYEALSNPS--YRGVI 248 (325)
Q Consensus 232 a~a~~~~~~~~~--~~~~~ 248 (325)
+++++.++..+. ..|.+
T Consensus 223 a~~~~~l~~~~~~~~~G~~ 241 (273)
T PRK08278 223 ADAAYEILSRPAREFTGNF 241 (273)
T ss_pred HHHHHHHhcCccccceeEE
Confidence 999999997643 44544
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=3.2e-15 Score=126.50 Aligned_cols=219 Identities=16% Similarity=0.077 Sum_probs=139.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++++||||+|+||.+++++|+++|++|++++|+++....... ......+..+|+.+++++.++++ +
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 344689999999999999999999999999999998654322211 00001134678888887776653 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|+|||+|+.... .....+.....+++|+.++.++++++... ....++++++||... +.. .+...
T Consensus 87 iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~--~~~---------~~~~~ 155 (264)
T PRK07576 87 IDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQA--FVP---------MPMQA 155 (264)
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhh--ccC---------CCCcc
Confidence 7999999985322 23345567788899999999998877542 112358999998754 211 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC--CcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG--GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+........+ .+++++.++|+.+.+... ................+ ...+...+|++++++
T Consensus 156 ~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~dva~~~~ 229 (264)
T PRK07576 156 HVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVP------LKRNGTKQDIANAAL 229 (264)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCC------CCCCCCHHHHHHHHH
Confidence 56 6676655555444332 479999999998875321 00000000001111111 223577899999999
Q ss_pred HHHcCCC--CCc-eEEeeCC
Q 020476 237 EALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~ 253 (325)
.+++.+. ..| .+.+.++
T Consensus 230 ~l~~~~~~~~~G~~~~~~gg 249 (264)
T PRK07576 230 FLASDMASYITGVVLPVDGG 249 (264)
T ss_pred HHcChhhcCccCCEEEECCC
Confidence 9997543 345 5555555
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.2e-14 Score=121.44 Aligned_cols=213 Identities=17% Similarity=0.105 Sum_probs=134.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecC-CCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++||||+|+||.++++.|+++|++|+++.|+ +....... ..........+|+.|++++.++++ .+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 479999999999999999999999999999883 22211110 000111144678888887766543 589
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+||.... .....+.+...++.|+.++..+ +..+++ .+.+++|++||.... .+. +..
T Consensus 81 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~iss~~~~-~~~----------~~~ 147 (242)
T TIGR01829 81 VLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRE--RGWGRIINISSVNGQ-KGQ----------FGQ 147 (242)
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcchhhc-CCC----------CCc
Confidence 99999986432 2334556677888999987664 445555 466789999987541 211 123
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+.. ..+++++.++|+.+.++..... ..+... .....++ ..+...+|+++++.
T Consensus 148 ~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~a~~~~ 219 (242)
T TIGR01829 148 TNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNS--IVAQIPV------GRLGRPEEIAAAVA 219 (242)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHH--HHhcCCC------CCCcCHHHHHHHHH
Confidence 456 566544444433332 2489999999999987743221 111111 1112222 12456789999998
Q ss_pred HHHcCCC---CCceEEeeCCC
Q 020476 237 EALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~ 254 (325)
.++.++. .+..+.+.++.
T Consensus 220 ~l~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 220 FLASEEAGYITGATLSINGGL 240 (242)
T ss_pred HHcCchhcCccCCEEEecCCc
Confidence 8876643 23377777664
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.7e-15 Score=126.06 Aligned_cols=221 Identities=14% Similarity=0.060 Sum_probs=137.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|.||.++++.|+++|++|++++|+ +...... ..........+|+.+++++.++++ ++|
T Consensus 6 ~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 84 (272)
T PRK08589 6 NKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRVD 84 (272)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCcC
Confidence 4689999999999999999999999999999998 3322211 111111244689998887766554 579
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-C-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
++||+||.... .....+.....+++|+.++..+++++... . .+ +++|++||... +... +...
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~~---------~~~~ 152 (272)
T PRK08589 85 VLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSG--QAAD---------LYRS 152 (272)
T ss_pred EEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhh--cCCC---------CCCc
Confidence 99999997422 12344566778889998876655554321 0 33 68999999765 3211 2234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccch-HHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+..+ .|++++.+.||.+..+........ .... ...... .........+...+|+++++.
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~va~~~~ 231 (272)
T PRK08589 153 GYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFREN-QKWMTPLGRLGKPEEVAKLVV 231 (272)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhh-hhccCCCCCCcCHHHHHHHHH
Confidence 67 6777666666555443 489999999999876632111000 0000 000000 000001112568899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.+.. ..| ++.+.++.
T Consensus 232 ~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 232 FLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HHcCchhcCcCCCEEEECCCc
Confidence 9987533 344 66666554
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.5e-15 Score=123.15 Aligned_cols=219 Identities=11% Similarity=0.042 Sum_probs=140.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
...++++||||+|.||.+++++|++.|++|++++|+.... ..............+|+.|.+++.++++ ++|
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3456899999999999999999999999999887754321 1111111111234678888887776664 589
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-C-CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~-~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
++|||||.... .+...+++...+++|+.++..+++++... . .+ .+++|++||... +... +...
T Consensus 88 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~ 156 (253)
T PRK08993 88 ILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLS--FQGG---------IRVP 156 (253)
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhh--ccCC---------CCCc
Confidence 99999997432 23445678889999999998888876431 0 22 357999999866 4322 1234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+..+ .|+++..++||.+-.+............ .....-|. .-+...+|++.+++.
T Consensus 157 ~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~eva~~~~~ 230 (253)
T PRK08993 157 SYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPA------GRWGLPSDLMGPVVF 230 (253)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCC------CCCcCHHHHHHHHHH
Confidence 67 6777666666555443 4899999999999766321110000000 11111111 126778999999999
Q ss_pred HHcCCC--CCc-eEEeeCC
Q 020476 238 ALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~ 253 (325)
++.+.. ..| ++.+.++
T Consensus 231 l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 231 LASSASDYINGYTIAVDGG 249 (253)
T ss_pred HhCccccCccCcEEEECCC
Confidence 997643 344 5544443
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=2.6e-15 Score=127.10 Aligned_cols=202 Identities=16% Similarity=0.145 Sum_probs=131.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhC------CCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ------GSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~------~~d~ 89 (325)
..++++||||+|+||.+++++|+++|++|++++|++......... .....+..+|+.|.+++.++++ .+|+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 456899999999999999999999999999999986543322111 1111244678888887766543 5899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||+||.... .....+.....+++|+.++.++++++... ..+.+++|++||.... ++. +....|
T Consensus 84 lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~-~~~----------~~~~~Y 152 (263)
T PRK09072 84 LINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGS-IGY----------PGYASY 152 (263)
T ss_pred EEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhC-cCC----------CCccHH
Confidence 9999997532 22344566778899999988888876431 0334678888876541 221 123456
Q ss_pred -HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|.........+.. ..+++++.+.|+.+..+..... . .... .........++|+|++++.+++
T Consensus 153 ~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~---~--------~~~~-~~~~~~~~~~~~va~~i~~~~~ 220 (263)
T PRK09072 153 CASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA---V--------QALN-RALGNAMDDPEDVAAAVLQAIE 220 (263)
T ss_pred HHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh---c--------cccc-ccccCCCCCHHHHHHHHHHHHh
Confidence 566554444433333 2479999999998865531110 0 0000 0001135788999999999998
Q ss_pred CCC
Q 020476 241 NPS 243 (325)
Q Consensus 241 ~~~ 243 (325)
++.
T Consensus 221 ~~~ 223 (263)
T PRK09072 221 KER 223 (263)
T ss_pred CCC
Confidence 763
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=4.3e-15 Score=128.49 Aligned_cols=177 Identities=13% Similarity=0.013 Sum_probs=114.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCC--CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++|+||||+|+||.+++++|+++|++|++++|+.++.... ... .....+..+|+.|.+++.++++
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 356899999999999999999999999999999976543211 100 0111244678889888776653
Q ss_pred CCCEEEECCCCCCC-CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC--
Q 020476 86 GSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-- 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~-~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-- 158 (325)
++|+||||||.... .....+..+..+++|+.+ +..+++.+++ .+.+++|++||.....++...........
T Consensus 95 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~--~~~~~iV~vSS~~~~~~~~~~~~~~~~~~~~ 172 (306)
T PRK06197 95 RIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLP--VPGSRVVTVSSGGHRIRAAIHFDDLQWERRY 172 (306)
T ss_pred CCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhh--CCCCEEEEECCHHHhccCCCCccccCcccCC
Confidence 58999999996432 222334556778899998 6667777766 45679999999865223321111111111
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEE--EEeceEEcCC
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLAL--IRIGIVLGKD 197 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~i--lRp~~i~g~~ 197 (325)
++...| .+|...+.....+..+ .++++++ +.||.+..+.
T Consensus 173 ~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~ 217 (306)
T PRK06197 173 NRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTEL 217 (306)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcc
Confidence 123357 6777766666555443 3555544 4699887663
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=8.5e-15 Score=123.38 Aligned_cols=215 Identities=15% Similarity=0.044 Sum_probs=137.0
Q ss_pred hcCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcc---------------cccCCCCCccccCceeecCCchh
Q 020476 18 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---------------ELIFPGKKTRFFPGVMIAEEPQW 80 (325)
Q Consensus 18 ~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---------------~~~~~~~~~~~~~~~d~~d~~~~ 80 (325)
.+.++|+||||+| .||.+++++|+++|++|++++|++.+. ...........+..+|+.+.+++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~ 82 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAP 82 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence 3456899999996 699999999999999999999873211 00000011112446788888877
Q ss_pred HhhhC-------CCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecC
Q 020476 81 RDCIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGT 148 (325)
Q Consensus 81 ~~~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~ 148 (325)
.++++ .+|+|||+||..... ....+.....+++|+.++..+++++... ....+++|++||... ++.
T Consensus 83 ~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~~~ 160 (256)
T PRK12748 83 NRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRIINLTSGQS--LGP 160 (256)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEEEEECCccc--cCC
Confidence 65543 579999999864322 2234556778999999999999887531 023468999998765 432
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceee
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS 224 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
. +....| .+|...+.....+..+ .+++++.++||.+..+.... .....+ ....+ ...
T Consensus 161 ~---------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~--~~~~~~--~~~~~------~~~ 221 (256)
T PRK12748 161 M---------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITE--ELKHHL--VPKFP------QGR 221 (256)
T ss_pred C---------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCCh--hHHHhh--hccCC------CCC
Confidence 1 112457 6777776655544433 48999999999876553210 111101 10111 112
Q ss_pred eccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 225 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+...+|+++++..++.... ..| ++++.++
T Consensus 222 ~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 222 VGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 4567999999998887533 334 7777655
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.66 E-value=6.7e-15 Score=121.23 Aligned_cols=199 Identities=11% Similarity=0.081 Sum_probs=134.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC----CCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d~vi~~a~~ 96 (325)
||++||||+|.||+++++.|+++|++|++++|+.++......... .....+|+.|++++.++++ ++|++||||+.
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag~ 79 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELD-VDAIVCDNTDPASLEEARGLFPHHLDTIVNVPAP 79 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-CcEEecCCCCHHHHHHHHHHHhhcCcEEEECCCc
Confidence 589999999999999999999999999999998655432211111 1144689999988877664 58999999974
Q ss_pred CCC----C--CC--ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 97 PIG----T--RW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 97 ~~~----~--~~--~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
... . .. ..+.+...+++|+.++..+++++.......+++|++||... +....| .+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~---------------~~~~~Y~asK 144 (223)
T PRK05884 80 SWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP---------------PAGSAEAAIK 144 (223)
T ss_pred cccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC---------------CCccccHHHH
Confidence 210 0 01 24567888999999999988887653222368999987531 123457 677
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC-
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS- 243 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~- 243 (325)
.........+..+ .++++..+.||.+..+.. ...... +.-..+|+++++..++....
T Consensus 145 aal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~----------~~~~~~---------p~~~~~~ia~~~~~l~s~~~~ 205 (223)
T PRK05884 145 AALSNWTAGQAAVFGTRGITINAVACGRSVQPGY----------DGLSRT---------PPPVAAEIARLALFLTTPAAR 205 (223)
T ss_pred HHHHHHHHHHHHHhhhcCeEEEEEecCccCchhh----------hhccCC---------CCCCHHHHHHHHHHHcCchhh
Confidence 6666555555443 489999999998864420 000000 11278999999999987533
Q ss_pred -CCc-eEEeeCCC
Q 020476 244 -YRG-VINGTAPN 254 (325)
Q Consensus 244 -~~~-~~~~~~~~ 254 (325)
..| ++.+.+|.
T Consensus 206 ~v~G~~i~vdgg~ 218 (223)
T PRK05884 206 HITGQTLHVSHGA 218 (223)
T ss_pred ccCCcEEEeCCCe
Confidence 334 66665554
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.9e-14 Score=120.03 Aligned_cols=196 Identities=11% Similarity=0.051 Sum_probs=128.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCC--chhHhh-------h-
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEE--PQWRDC-------I- 84 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~--~~~~~~-------~- 84 (325)
.++++||||+|+||.+++++|+++|++|++++|++......... ........+|+.+. +.+.++ +
T Consensus 6 ~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~~ 85 (239)
T PRK08703 6 DKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEATQ 85 (239)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHhC
Confidence 36899999999999999999999999999999987543322110 00111345677642 333332 2
Q ss_pred CCCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 85 QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
.++|+|||+||.... .....+.....+++|+.++.++++++.+. ..+..+++++||... . . ..
T Consensus 86 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~--~--~-------~~ 154 (239)
T PRK08703 86 GKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHG--E--T-------PK 154 (239)
T ss_pred CCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEecccc--c--c-------CC
Confidence 367999999996421 23345566778899999988887766432 134568999988643 1 1 01
Q ss_pred CCCCch-HHHHHHHHHHHHHhhcC----CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVNK----DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~~----~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+. ++++.+++||.+.++..... . . +.........+|++.
T Consensus 155 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~---~------~------~~~~~~~~~~~~~~~ 219 (239)
T PRK08703 155 AYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS---H------P------GEAKSERKSYGDVLP 219 (239)
T ss_pred CCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc---C------C------CCCccccCCHHHHHH
Confidence 223457 77777666655544432 69999999999998842110 0 0 011123568899999
Q ss_pred HHHHHHcC
Q 020476 234 LIYEALSN 241 (325)
Q Consensus 234 a~~~~~~~ 241 (325)
++..++..
T Consensus 220 ~~~~~~~~ 227 (239)
T PRK08703 220 AFVWWASA 227 (239)
T ss_pred HHHHHhCc
Confidence 99999974
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.8e-14 Score=120.14 Aligned_cols=189 Identities=14% Similarity=0.119 Sum_probs=123.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
+.++++||||+|+||+++++.|+++|++|++++|+............ .....+|+.|.+++.+.+.++|++|||||...
T Consensus 13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~iDilVnnAG~~~ 91 (245)
T PRK12367 13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESP-NEWIKWECGKEESLDKQLASLDVLILNHGINP 91 (245)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCC-CeEEEeeCCCHHHHHHhcCCCCEEEECCccCC
Confidence 34689999999999999999999999999999997622111111100 11345788899888888889999999999754
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C--CCCC-EEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESP--E--GVRP-SVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW 172 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~--~~~~-~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~ 172 (325)
....+.+.+...+++|+.++..+++++.... . ..++ ++..||.+. ... +..+.| .+|.....
T Consensus 92 ~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~--~~~----------~~~~~Y~aSKaal~~ 159 (245)
T PRK12367 92 GGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAE--IQP----------ALSPSYEISKRLIGQ 159 (245)
T ss_pred cCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccc--cCC----------CCCchhHHHHHHHHH
Confidence 4445577788999999999999888765421 1 1133 333343322 210 123457 66665432
Q ss_pred HHHHHh------hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 173 EGTALK------VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 173 ~~~~~~------~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
...... ...++.+..+.|+.+..+.. + ...+..+|+|+.++.++.++.
T Consensus 160 ~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~----------------~-------~~~~~~~~vA~~i~~~~~~~~ 213 (245)
T PRK12367 160 LVSLKKNLLDKNERKKLIIRKLILGPFRSELN----------------P-------IGIMSADFVAKQILDQANLGL 213 (245)
T ss_pred HHHHHHHHHHhhcccccEEEEecCCCcccccC----------------c-------cCCCCHHHHHHHHHHHHhcCC
Confidence 221111 23578888888876532210 0 114788999999999997764
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=3.5e-15 Score=126.50 Aligned_cols=219 Identities=14% Similarity=0.078 Sum_probs=140.6
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+....++++||||+|+||.++++.|+++|++|++++|+........ .....+|+.|++++.++++ .+|
T Consensus 5 ~~l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~-----~~~~~~D~~~~~~~~~~~~~~~~~~g~id 79 (266)
T PRK06171 5 LNLQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQHEN-----YQFVPTDVSSAEEVNHTVAEIIEKFGRID 79 (266)
T ss_pred ccCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccccCc-----eEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 3344578999999999999999999999999999999875533211 1144689999888776654 579
Q ss_pred EEEECCCCCCC------------CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCcee
Q 020476 89 AVVNLAGTPIG------------TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 89 ~vi~~a~~~~~------------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
+|||+||.... .....+.++..+++|+.++..+++++.... .+..++|++||... +...
T Consensus 80 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~----- 152 (266)
T PRK06171 80 GLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMSSEAG--LEGS----- 152 (266)
T ss_pred EEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEccccc--cCCC-----
Confidence 99999996422 123556678889999999998888776421 23457999998765 2211
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-C-cccch--------HHHH-HHHcCCCCCCC
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-G-ALAKM--------IPLF-MMFAGGPLGSG 219 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-~-~~~~~--------~~~~-~~~~~~~~~~~ 219 (325)
+....| .+|...+.....+..+ .++++.+++||.+..... . ..... .... ..... ...
T Consensus 153 ----~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 225 (266)
T PRK06171 153 ----EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRAGYTK---TST 225 (266)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHhhhcc---ccc
Confidence 223457 6666665555444433 489999999998852211 0 00000 0000 00000 001
Q ss_pred cceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 220 QQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 220 ~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
.....+...+|+|.++..++.... ..| ++++.+|
T Consensus 226 ~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 226 IPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred ccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 111235778999999999987543 334 6666555
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=2e-14 Score=118.40 Aligned_cols=202 Identities=14% Similarity=0.091 Sum_probs=136.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh---C--CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---Q--GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---~--~~d~vi~~a 94 (325)
|++++||||+|+||+++++.|++.|++|++++|+++......... ..+..+|+.+.+.+.+++ . ++|+|||++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~--~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~a 78 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALG--AEALALDVADPASVAGLAWKLDGEALDAAVYVA 78 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhcc--ceEEEecCCCHHHHHHHHHHhcCCCCCEEEECC
Confidence 468999999999999999999999999999999876543332211 124568999988887753 2 489999999
Q ss_pred CCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 95 GTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 95 ~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
|.... .....+.+...++.|+.++.++++++.... ....+++++||.... ++.... .....| .+|
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~~~~-------~~~~~Y~~sK 150 (222)
T PRK06953 79 GVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGS-IGDATG-------TTGWLYRASK 150 (222)
T ss_pred CcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCcccc-cccccC-------CCccccHHhH
Confidence 97521 122566778899999999999998886421 223578888886531 442211 111247 677
Q ss_pred HHHHHHHHHHhhc-CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--C
Q 020476 168 VCREWEGTALKVN-KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--Y 244 (325)
Q Consensus 168 ~~~~~~~~~~~~~-~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~ 244 (325)
...+.....+..+ .++++..++|+++..+... + ...+..++.+..+..++.... .
T Consensus 151 ~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~------------------~----~~~~~~~~~~~~~~~~~~~~~~~~ 208 (222)
T PRK06953 151 AALNDALRAASLQARHATCIALHPGWVRTDMGG------------------A----QAALDPAQSVAGMRRVIAQATRRD 208 (222)
T ss_pred HHHHHHHHHHhhhccCcEEEEECCCeeecCCCC------------------C----CCCCCHHHHHHHHHHHHHhcCccc
Confidence 7666655555443 3789999999998766311 0 113677888888888776443 3
Q ss_pred CceEEeeCC
Q 020476 245 RGVINGTAP 253 (325)
Q Consensus 245 ~~~~~~~~~ 253 (325)
.++|.-.++
T Consensus 209 ~~~~~~~~~ 217 (222)
T PRK06953 209 NGRFFQYDG 217 (222)
T ss_pred CceEEeeCC
Confidence 445543333
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.65 E-value=5.7e-15 Score=137.11 Aligned_cols=218 Identities=16% Similarity=0.102 Sum_probs=146.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|.||.++++.|+++|++|++++|+.++....... ........+|+.|++++.++++ .+|++|
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 348 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVLV 348 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999986544332211 1111134689999988776664 489999
Q ss_pred ECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 92 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 92 ~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||||.... .+.+.+.++..+++|+.++..+++++.....+.+++|++||... +.. .+....| .+
T Consensus 349 ~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~as 417 (520)
T PRK06484 349 NNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS--LLA---------LPPRNAYCAS 417 (520)
T ss_pred ECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh--cCC---------CCCCchhHHH
Confidence 99996421 23345677889999999999988877653223468999999865 221 1234567 77
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccch-HHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
|...+.....+..+ .|+++..+.||.+..+........ .... ......+. ..+...+|+|++++.++..
T Consensus 418 Kaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dia~~~~~l~s~ 491 (520)
T PRK06484 418 KAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPL------GRLGDPEEVAEAIAFLASP 491 (520)
T ss_pred HHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCc
Confidence 77777666655543 389999999999987632111000 0001 11111121 1257889999999999875
Q ss_pred CC--CCc-eEEeeCCC
Q 020476 242 PS--YRG-VINGTAPN 254 (325)
Q Consensus 242 ~~--~~~-~~~~~~~~ 254 (325)
.. ..| ++.+.++.
T Consensus 492 ~~~~~~G~~i~vdgg~ 507 (520)
T PRK06484 492 AASYVNGATLTVDGGW 507 (520)
T ss_pred cccCccCcEEEECCCc
Confidence 43 344 66666553
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.7e-15 Score=126.27 Aligned_cols=219 Identities=18% Similarity=0.098 Sum_probs=135.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
++++||||+|+||.+++++|++.|++|+++.|+........ ..........+|+.|++++.++++ .+|+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~ 80 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDV 80 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47999999999999999999999999999999764332211 111111234578889888776653 5799
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||+||.... .....+..+..+++|+.++..+++++... ..+ .+++|++||.... ++. +....
T Consensus 81 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~ 149 (254)
T TIGR02415 81 MVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGH-EGN----------PILSA 149 (254)
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhc-CCC----------CCCcc
Confidence 9999986422 13345566788999999887666554321 022 3689999886541 331 22445
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCC-------CCcceeeeccHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG-------SGQQWFSWIHLDDIV 232 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~v~v~D~a 232 (325)
| .+|...+.....+..+ .++.+..++|+.+..+... .+........+.+++ .......+.+.+|++
T Consensus 150 Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 226 (254)
T TIGR02415 150 YSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWE---EIDEETSEIAGKPIGEGFEEFSSEIALGRPSEPEDVA 226 (254)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhh---hhhhhhhhcccCchHHHHHHHHhhCCCCCCCCHHHHH
Confidence 7 6676666555444333 3799999999988655311 110000000000000 001112378889999
Q ss_pred HHHHHHHcCCC--CCceEEeeCC
Q 020476 233 NLIYEALSNPS--YRGVINGTAP 253 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~~~~~~~~ 253 (325)
+++..+++.+. ..|.+...++
T Consensus 227 ~~~~~l~~~~~~~~~g~~~~~d~ 249 (254)
T TIGR02415 227 GLVSFLASEDSDYITGQSILVDG 249 (254)
T ss_pred HHHHhhcccccCCccCcEEEecC
Confidence 99999998754 3454444443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-14 Score=124.08 Aligned_cols=205 Identities=15% Similarity=0.084 Sum_probs=130.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
|+++||||+|.||.++++.|+++|++|++++|+++...... ... ....+..+|+.|++.+.++++ ++|
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 47999999999999999999999999999999765432211 100 001124578888887665443 589
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||+||.... .+...+.....+++|+.++..+++++.... ...+++|++||... +.. .+...
T Consensus 81 ~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~--~~~---------~~~~~ 149 (272)
T PRK07832 81 VVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAG--LVA---------LPWHA 149 (272)
T ss_pred EEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccc--cCC---------CCCCc
Confidence 99999986422 234556678889999999999998864210 22468999998754 211 12233
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc-----chHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-----KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...+........ ..++++++++||.+.++...... .-......... ......+..+|+|.
T Consensus 150 ~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~vA~ 223 (272)
T PRK07832 150 AYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVD------RFRGHAVTPEKAAE 223 (272)
T ss_pred chHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHH------hcccCCCCHHHHHH
Confidence 46 556544433332222 35899999999999877421110 00000000000 01123589999999
Q ss_pred HHHHHHcCC
Q 020476 234 LIYEALSNP 242 (325)
Q Consensus 234 a~~~~~~~~ 242 (325)
+++.++.++
T Consensus 224 ~~~~~~~~~ 232 (272)
T PRK07832 224 KILAGVEKN 232 (272)
T ss_pred HHHHHHhcC
Confidence 999999653
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.7e-14 Score=121.76 Aligned_cols=215 Identities=13% Similarity=0.022 Sum_probs=133.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-ccccc----CC-CCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI----FP-GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~----~~-~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|.||++++++|++.|++|+++.|+.. ..... .. .........+|+.|++++.++++ +
T Consensus 8 ~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 87 (260)
T PRK08416 8 GKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFDR 87 (260)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 468999999999999999999999999988876432 21111 10 01111244679999887776654 5
Q ss_pred CCEEEECCCCCCC---------CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCce
Q 020476 87 STAVVNLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 87 ~d~vi~~a~~~~~---------~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
+|++|||||.... .....+.....+++|+.+...+.+. +++ .+.+++|++||... +-.
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~----- 158 (260)
T PRK08416 88 VDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEK--VGGGSIISLSSTGN--LVY----- 158 (260)
T ss_pred ccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhc--cCCEEEEEEecccc--ccC-----
Confidence 8999999985311 1223455666788888776554443 443 34568999999754 211
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.+....| .+|...+.....+..+ .|+++..+.||.+-.+............ ......|. ..+...
T Consensus 159 ----~~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~------~r~~~p 228 (260)
T PRK08416 159 ----IENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPL------NRMGQP 228 (260)
T ss_pred ----CCCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCC------CCCCCH
Confidence 1223456 6777777666665554 3899999999988655211111111111 11111121 126789
Q ss_pred HHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 229 DDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+|++.+++.++.... ..| .+.+.++
T Consensus 229 ~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 229 EDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 999999999987542 334 5556554
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.9e-14 Score=121.93 Aligned_cols=218 Identities=16% Similarity=0.065 Sum_probs=133.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----C--CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|.||.++++.|+++|++|++++|++++...... . ........+|+.|.+++.++++ .
T Consensus 8 ~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T PRK07062 8 GRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFGG 87 (265)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999998754332111 0 0011134578889887766543 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .....+.+...+++|+.+...+++ .+++ .+.+++|++||... +... +
T Consensus 88 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~ 154 (265)
T PRK07062 88 VDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRA--SAAASIVCVNSLLA--LQPE---------P 154 (265)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhc--cCCcEEEEeccccc--cCCC---------C
Confidence 7999999996422 223445677778888877555544 4444 44578999999765 3211 1
Q ss_pred CCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCc-cc-------chHHHHHHHcCCCCCCCcceeeecc
Q 020476 160 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LA-------KMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
....| .+|............ ..|++++.++||.+..+.... .. .+.......... .......+..
T Consensus 155 ~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~p~~r~~~ 231 (265)
T PRK07062 155 HMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARK---KGIPLGRLGR 231 (265)
T ss_pred CchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhc---CCCCcCCCCC
Confidence 23346 555554444433333 248999999999987653110 00 000000000000 0011123678
Q ss_pred HHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 228 LDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
.+|++.++..++.... ..| ++.+.++
T Consensus 232 p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 232 PDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred HHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 8999999999887532 344 6666665
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.64 E-value=2.4e-14 Score=120.32 Aligned_cols=217 Identities=13% Similarity=0.012 Sum_probs=138.7
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+ +-||.+++++|+++|++|++..|+.......... ........+|+.|++++.++++ ++|+
T Consensus 7 ~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~ 86 (252)
T PRK06079 7 GKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKIDG 86 (252)
T ss_pred CCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4689999999 7999999999999999999999874221111110 0111245689999887776543 5899
Q ss_pred EEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||||.... .+...+.++..+++|+.+...+.+++.......+++|++||... ... .+...
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~~---------~~~~~ 155 (252)
T PRK06079 87 IVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGS--ERA---------IPNYN 155 (252)
T ss_pred EEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCc--ccc---------CCcch
Confidence 9999996421 23345667888999999988887776653223368999998654 111 12234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHH-HcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|.........+..+ .|+++..+.||.|-.+.......--..... ....|. ..+...+|+++++..
T Consensus 156 ~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~~~~ 229 (252)
T PRK06079 156 VMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVD------GVGVTIEEVGNTAAF 229 (252)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcc------cCCCCHHHHHHHHHH
Confidence 56 6777666665555443 489999999999976531111000011111 111111 236788999999999
Q ss_pred HHcCCC--CCc-eEEeeCC
Q 020476 238 ALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~ 253 (325)
++.... ..| ++.+.++
T Consensus 230 l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 230 LLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HhCcccccccccEEEeCCc
Confidence 997643 334 5555544
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.64 E-value=3.8e-15 Score=140.98 Aligned_cols=222 Identities=18% Similarity=0.136 Sum_probs=140.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|||||+|+||++++++|+++|++|++++|+.......... . .......+|+.|.+++.++++ +
T Consensus 414 gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g~ 493 (676)
T TIGR02632 414 RRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYGG 493 (676)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999999999999986543221100 0 001134689999988877765 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEG-VRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|+||||||.... .....+.+...+++|+.+...+. ..+++ .+ .+++|++||.... ++.
T Consensus 494 iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~--~~~~g~IV~iSS~~a~-~~~---------- 560 (676)
T TIGR02632 494 VDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMRE--QGLGGNIVFIASKNAV-YAG---------- 560 (676)
T ss_pred CcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCEEEEEeChhhc-CCC----------
Confidence 8999999997532 22234566778888988866554 34443 22 3579999997541 331
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEE-cCCCCcccchHHHHHHHcCC-------CCCCCcceeeec
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGG-------PLGSGQQWFSWI 226 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~-g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v 226 (325)
+....| .+|...+.....+..+ .|+++..++|+.++ |.+... ..+........+. ..........++
T Consensus 561 ~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~-~~~~~~~~~~~~~~~~~~~~~~~~r~~l~r~v 639 (676)
T TIGR02632 561 KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWD-GEWREERAAAYGIPADELEEHYAKRTLLKRHI 639 (676)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCccccc-ccchhhhhhcccCChHHHHHHHHhcCCcCCCc
Confidence 123467 7787777666655543 48999999999987 332100 0010000000000 001112223468
Q ss_pred cHHHHHHHHHHHHcCCC--C-CceEEeeCCCC
Q 020476 227 HLDDIVNLIYEALSNPS--Y-RGVINGTAPNP 255 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~--~-~~~~~~~~~~~ 255 (325)
+.+|+|+++..++.... . +.++++.+|..
T Consensus 640 ~peDVA~av~~L~s~~~~~~TG~~i~vDGG~~ 671 (676)
T TIGR02632 640 FPADIAEAVFFLASSKSEKTTGCIITVDGGVP 671 (676)
T ss_pred CHHHHHHHHHHHhCCcccCCcCcEEEECCCch
Confidence 89999999999886532 2 34778877753
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-14 Score=122.34 Aligned_cols=219 Identities=12% Similarity=0.055 Sum_probs=138.9
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+ +.||.++++.|++.|++|++..|+.. ................+|+.|.+++.++++ +
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 45789999997 79999999999999999999998742 111111110000245689999988776653 5
Q ss_pred CCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++.......+++|++||.+. .. ..+
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~--~~---------~~~ 152 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG--VK---------YVP 152 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC--cc---------CCC
Confidence 8999999996421 23446677889999999988887766543222368999998654 11 012
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHH-HcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|.........+..+ .|+++..+.||.+..+.............. ....|. .-+...+|++++
T Consensus 153 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl------~r~~~pedva~~ 226 (274)
T PRK08415 153 HYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPL------KKNVSIEEVGNS 226 (274)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCch------hccCCHHHHHHH
Confidence 23456 6777666555555543 489999999999876421110000000000 001111 225778999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++.++.... ..| .+.+.+|.
T Consensus 227 v~fL~s~~~~~itG~~i~vdGG~ 249 (274)
T PRK08415 227 GMYLLSDLSSGVTGEIHYVDAGY 249 (274)
T ss_pred HHHHhhhhhhcccccEEEEcCcc
Confidence 999987532 344 56666553
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=4.9e-15 Score=127.39 Aligned_cols=208 Identities=15% Similarity=0.141 Sum_probs=136.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|.||.++++.|++.|++|++++|+.+........ ........+|+.|.+++.++++ ++|+
T Consensus 9 gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~ 88 (296)
T PRK05872 9 GKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGIDV 88 (296)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 46899999999999999999999999999999987653322111 0001122479999887776553 5899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||||||.... ...+.+..+..+++|+.++.++++++... ....+++|++||... +... +....|
T Consensus 89 vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~ 157 (296)
T PRK05872 89 VVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAA--FAAA---------PGMAAYC 157 (296)
T ss_pred EEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhh--cCCC---------CCchHHH
Confidence 9999997432 23345667788999999999988876531 112368999999765 3321 223457
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+.. ..++.+.++.|+++..+............. .....+ .....++..+|++++++.++.
T Consensus 158 asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~va~~i~~~~~ 233 (296)
T PRK05872 158 ASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLP----WPLRRTTSVEKCAAAFVDGIE 233 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCC----CcccCCCCHHHHHHHHHHHHh
Confidence 667666655554443 248999999999987653211100001111 111111 011236789999999999997
Q ss_pred CC
Q 020476 241 NP 242 (325)
Q Consensus 241 ~~ 242 (325)
+.
T Consensus 234 ~~ 235 (296)
T PRK05872 234 RR 235 (296)
T ss_pred cC
Confidence 65
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.8e-14 Score=121.60 Aligned_cols=223 Identities=14% Similarity=0.051 Sum_probs=133.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
|+++||||+|.||++++++|+++|++|++++|+++....... .........+|+.|.+++.++++ ++|+|
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~l 80 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDAL 80 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 689999999999999999999999999999998654322111 00011244689999888776653 68999
Q ss_pred EECCCCCCC-----CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 91 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 91 i~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
||+||.... .+...+.....+.+|+.+...+ +..+.+. .+.+++|++||... ... .+..
T Consensus 81 i~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-~~~g~iv~isS~~~--~~~---------~~~~ 148 (259)
T PRK08340 81 VWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEK-KMKGVLVYLSSVSV--KEP---------MPPL 148 (259)
T ss_pred EECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhc-CCCCEEEEEeCccc--CCC---------CCCc
Confidence 999996421 1222334455567777664433 3333320 34568999999865 221 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHH----HHHHcCCCCCCCcceeeeccHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPL----FMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..| .+|.........+..+ .|+++..+.||.+-.+.... ....... ........+.......-+...+|+|
T Consensus 149 ~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva 228 (259)
T PRK08340 149 VLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKRTGRWEELG 228 (259)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccCCCCHHHHH
Confidence 456 6676666555555443 47999999999887663210 0000000 0000000000001112367889999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
+++..++..+. ..| +..+.++..
T Consensus 229 ~~~~fL~s~~~~~itG~~i~vdgg~~ 254 (259)
T PRK08340 229 SLIAFLLSENAEYMLGSTIVFDGAMT 254 (259)
T ss_pred HHHHHHcCcccccccCceEeecCCcC
Confidence 99999997643 344 566666643
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.9e-14 Score=127.00 Aligned_cols=192 Identities=15% Similarity=0.126 Sum_probs=123.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+++++||||+|+||++++++|+++|++|++++|++++...... .........+|+.|.+.+.+.+.++|++|||||.
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi 255 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI 255 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence 345789999999999999999999999999999997654322111 0000113357888999998888999999999997
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCRE 171 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~ 171 (325)
....+.+.+.....+++|+.++.++++++.... .+ ..+.+.+.++... .+ .+..+.| .+|....
T Consensus 256 ~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~-~~----------~~~~~~Y~ASKaAl~ 324 (406)
T PRK07424 256 NVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAE-VN----------PAFSPLYELSKRALG 324 (406)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEcccc-cc----------CCCchHHHHHHHHHH
Confidence 544455666778899999999999888864320 11 1222222222221 11 0123457 6777665
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
..........+..+..+.|+.+ .... . ....+..+|+|+.++.+++.+.
T Consensus 325 ~l~~l~~~~~~~~I~~i~~gp~----~t~~---------------~----~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 325 DLVTLRRLDAPCVVRKLILGPF----KSNL---------------N----PIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred HHHHHHHhCCCCceEEEEeCCC----cCCC---------------C----cCCCCCHHHHHHHHHHHHHCCC
Confidence 5444443334444444444332 1111 0 1124789999999999998764
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=8.8e-15 Score=122.94 Aligned_cols=210 Identities=10% Similarity=0.043 Sum_probs=130.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccCCC-CCccccCceeecCCchhHhhhCCC----------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-KKTRFFPGVMIAEEPQWRDCIQGS---------- 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~~~---------- 87 (325)
|++++||||+|+||++++++|+++|++|++++|++.+ ....... .....+..+|+.+.+++.++++.+
T Consensus 1 ~k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 1 MRYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred CcEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 4689999999999999999999999999999997632 1111111 111124468999988887666421
Q ss_pred -CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 88 -TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 88 -d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+++||+||.... .....+.....+++|+.+...+++ .+++. .+.+++|++||... +. ..
T Consensus 81 ~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~iv~~sS~~~--~~---------~~ 148 (251)
T PRK06924 81 SIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDW-KVDKRVINISSGAA--KN---------PY 148 (251)
T ss_pred ceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhcc-CCCceEEEecchhh--cC---------CC
Confidence 278999986422 234556677888899888555544 44431 13468999998754 21 11
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCc----ccchHHHH-HHHcCCCCCCCcceeeecc
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~v~ 227 (325)
+....| .+|...+.....+..+ .++++..++||.+-.+.... ........ ......+ ...+..
T Consensus 149 ~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 222 (251)
T PRK06924 149 FGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKE------EGKLLS 222 (251)
T ss_pred CCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhh------cCCcCC
Confidence 234457 6777666665544432 47999999999886542100 00000000 0000000 112688
Q ss_pred HHHHHHHHHHHHcC-CCCCce
Q 020476 228 LDDIVNLIYEALSN-PSYRGV 247 (325)
Q Consensus 228 v~D~a~a~~~~~~~-~~~~~~ 247 (325)
.+|+|++++.++++ ....|.
T Consensus 223 ~~dva~~~~~l~~~~~~~~G~ 243 (251)
T PRK06924 223 PEYVAKALRNLLETEDFPNGE 243 (251)
T ss_pred HHHHHHHHHHHHhcccCCCCC
Confidence 99999999999987 334453
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.63 E-value=3e-14 Score=120.51 Aligned_cols=214 Identities=15% Similarity=0.038 Sum_probs=137.9
Q ss_pred CCeEEEECCCc-hHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----C-CccccCceeecCCchhHhhhC-------
Q 020476 20 QMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----K-KTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 20 ~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~-~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
.++++||||+| -||.++++.|+++|++|++.+|+..+....... . .......+|+.+.+++.++++
T Consensus 17 ~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 96 (262)
T PRK07831 17 GKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVERLG 96 (262)
T ss_pred CCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 46899999998 699999999999999999999876543221110 0 011134578888887776653
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
.+|+||||||.... .....+.+...+++|+.++..+++++.... .+ ..++|++||... +.. .+
T Consensus 97 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~--~~~---------~~ 165 (262)
T PRK07831 97 RLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLG--WRA---------QH 165 (262)
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC---------CC
Confidence 57999999996422 233445677788899999888777654310 22 457888877543 211 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc--cchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
....| .+|...+.....+..+ .++++..++|+.+..+..... ..... ......++ ..+...+|+++
T Consensus 166 ~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~--~~~~~~~~------~r~~~p~~va~ 237 (262)
T PRK07831 166 GQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLD--ELAAREAF------GRAAEPWEVAN 237 (262)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHH--HHHhcCCC------CCCcCHHHHHH
Confidence 34457 7787777666665543 589999999999987742111 11111 11111121 23667899999
Q ss_pred HHHHHHcCCC--CCc-eEEeeC
Q 020476 234 LIYEALSNPS--YRG-VINGTA 252 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~ 252 (325)
+++.++.... ..| ++.+.+
T Consensus 238 ~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 238 VIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred HHHHHcCchhcCcCCceEEeCC
Confidence 9999987643 334 555544
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=3.1e-14 Score=120.06 Aligned_cols=218 Identities=12% Similarity=0.027 Sum_probs=137.7
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+ +.||.+++++|+++|++|++.+|+.... ..............+|+.|.+++.++++ +
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 45689999998 4999999999999999999999875421 1111111111245689999887776553 5
Q ss_pred CCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++........++|++||... .. ..+
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~--~~---------~~~ 157 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA--EK---------VVE 157 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc--cc---------CCc
Confidence 8999999986421 23355678889999999988888876543222357889888654 11 012
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|.........+..+ .++++..+.||.+-.+-.......-... ......|. ..+...+|++.+
T Consensus 158 ~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~ 231 (258)
T PRK07533 158 NYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPL------RRLVDIDDVGAV 231 (258)
T ss_pred cchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence 23456 6676665555544443 4899999999988765211111011111 11111121 235788999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCC
Q 020476 235 IYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~ 253 (325)
++.++.+.. ..| .+.+.++
T Consensus 232 ~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 232 AAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHhChhhccccCcEEeeCCc
Confidence 999987632 344 5555444
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.3e-14 Score=119.35 Aligned_cols=218 Identities=12% Similarity=0.067 Sum_probs=138.6
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||++ .||.++++.|++.|++|++..|+....+ .............+|+.|.+++.++++ .+
T Consensus 7 ~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (271)
T PRK06505 7 GKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGKL 86 (271)
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 35799999997 9999999999999999999988653211 111110001234689999988776653 58
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .+...+.+...+++|+.++..+++++.......+++|++||... .. ..+.
T Consensus 87 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~--~~---------~~~~ 155 (271)
T PRK06505 87 DFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGS--TR---------VMPN 155 (271)
T ss_pred CEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCc--cc---------cCCc
Confidence 999999996421 23446677888999999988887766543122368999998754 11 0122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHH-cCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|.........+..+ .|+++..+.||.+-.+............... ...|+ ..+...+|+|+++
T Consensus 156 ~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peeva~~~ 229 (271)
T PRK06505 156 YNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPL------RRTVTIDEVGGSA 229 (271)
T ss_pred cchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCc------cccCCHHHHHHHH
Confidence 3456 6776665555554443 4899999999998765321111100011111 11121 1256789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.... ..| ++.+.++.
T Consensus 230 ~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 230 LYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHHhCccccccCceEEeecCCc
Confidence 99987543 344 56666553
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=9.9e-14 Score=117.25 Aligned_cols=216 Identities=14% Similarity=0.051 Sum_probs=133.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|.||.++++.|+++|+.|+++.|+.... .... ..........+|+.|.+++.++++ +
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 357999999999999999999999999999888854321 1111 111111134578888887776553 5
Q ss_pred CCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHH----HHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKV----VDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|++||+||..... ....+..+..+++|+.++..+ ++.+.+ .+ .+++|++||... +.. .
T Consensus 86 id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~g~iv~~sS~~~--~~~---------~ 152 (261)
T PRK08936 86 LDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVE--HDIKGNIINMSSVHE--QIP---------W 152 (261)
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCcEEEEEccccc--cCC---------C
Confidence 89999999974332 233456677889998876554 445554 22 368999998654 211 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .+++++.++||.+..+... ...............+. ..+...+|+++
T Consensus 153 ~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~va~ 226 (261)
T PRK08936 153 PLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPM------GYIGKPEEIAA 226 (261)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCC------CCCcCHHHHHH
Confidence 233456 5665544444433322 4899999999999877421 11110101111111121 23677899999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
.+..++.... ..| .+.+.++
T Consensus 227 ~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 227 VAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred HHHHHcCcccCCccCcEEEECCC
Confidence 9999987543 445 4555544
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.61 E-value=3.6e-14 Score=119.61 Aligned_cols=219 Identities=15% Similarity=0.076 Sum_probs=137.7
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcc------cccCCCCCccccCceeecCCchhHhhhC-----
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA------ELIFPGKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~------~~~~~~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
+.++++||||+ +-||.+++++|++.|++|++..|+.+.. ..............+|+.|++++.++++
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 34689999986 7999999999999999998887654321 1111111111245689999988876653
Q ss_pred --CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 --GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 --~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|++|||||.... .+.+.+.++..+++|+.++..+.+++.......+++|++||... ...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~-------- 154 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG--VRA-------- 154 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc--ccC--------
Confidence 58999999996421 22345667888999999988887766532122368999998654 210
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
.+....| .+|...+.....+..+ .|+++..+.||.+-.+............ ......| ...+...+|+
T Consensus 155 -~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~~~dv 227 (258)
T PRK07370 155 -IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAP------LRRTVTQTEV 227 (258)
T ss_pred -CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCC------cCcCCCHHHH
Confidence 1223457 6777666665555443 4899999999999765321110000001 1111111 1236678999
Q ss_pred HHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 232 VNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++++..++..+. ..| ++.+.++.
T Consensus 228 a~~~~fl~s~~~~~~tG~~i~vdgg~ 253 (258)
T PRK07370 228 GNTAAFLLSDLASGITGQTIYVDAGY 253 (258)
T ss_pred HHHHHHHhChhhccccCcEEEECCcc
Confidence 999999997543 334 56565553
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.61 E-value=5.5e-14 Score=117.17 Aligned_cols=210 Identities=18% Similarity=0.135 Sum_probs=133.9
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
|+||||+|+||.++++.|+++|++|+++.|+.+. ..... ..........+|+.|.+++.++++ ..|++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999999876432 11111 111111244688888887766553 47999
Q ss_pred EECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHh-----cCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 91 VNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 91 i~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
||++|..... ....+.+...+++|+.++.++++++. + .+.+++|++||.... ++.. ...
T Consensus 81 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~~~iv~vsS~~~~-~~~~----------~~~ 147 (239)
T TIGR01831 81 VLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRA--RQGGRIITLASVSGV-MGNR----------GQV 147 (239)
T ss_pred EECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh--cCCeEEEEEcchhhc-cCCC----------CCc
Confidence 9999964322 23456778899999999999888652 2 244689999997641 4421 234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+ .+++++.++|+.+.++.......... ......++ ..+...+|+++++..+
T Consensus 148 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~--~~~~~~~~------~~~~~~~~va~~~~~l 219 (239)
T TIGR01831 148 NYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEHDLD--EALKTVPM------NRMGQPAEVASLAGFL 219 (239)
T ss_pred chHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhHHHH--HHHhcCCC------CCCCCHHHHHHHHHHH
Confidence 56 5666554444333332 48999999999987764321111111 11111121 1256789999999999
Q ss_pred HcCCC--CCc-eEEeeCC
Q 020476 239 LSNPS--YRG-VINGTAP 253 (325)
Q Consensus 239 ~~~~~--~~~-~~~~~~~ 253 (325)
+..+. ..| +..+.++
T Consensus 220 ~~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 220 MSDGASYVTRQVISVNGG 237 (239)
T ss_pred cCchhcCccCCEEEecCC
Confidence 97643 334 4444443
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.9e-14 Score=121.75 Aligned_cols=218 Identities=17% Similarity=0.081 Sum_probs=137.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||.++++.|++.|++|++++|+++......... .......+|+.|.+.+.++++ ++|++|
T Consensus 6 ~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li 85 (263)
T PRK06200 6 GQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCFV 85 (263)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 468999999999999999999999999999999875543322110 001134578888887766553 589999
Q ss_pred ECCCCCCC-C---CCChh----hHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 92 NLAGTPIG-T---RWSSE----IKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 92 ~~a~~~~~-~---~~~~~----~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+||.... . ....+ .++..+++|+.++..+++++... ....+++|++||... +... +...
T Consensus 86 ~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~~ 154 (263)
T PRK06200 86 GNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSS--FYPG---------GGGP 154 (263)
T ss_pred ECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhh--cCCC---------CCCc
Confidence 99996421 1 11222 25667889999988887776532 012357999998765 3211 1234
Q ss_pred ch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcc-----cc-h--HH-HHHHHcCCCCCCCcceeeeccHHH
Q 020476 163 DY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL-----AK-M--IP-LFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~-----~~-~--~~-~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
.| .+|...+.....+..+. ++++..+.||.+..+-.... .. + .+ ..... .......-+...+|
T Consensus 155 ~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~p~~r~~~~~e 229 (263)
T PRK06200 155 LYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMI-----AAITPLQFAPQPED 229 (263)
T ss_pred hhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHh-----hcCCCCCCCCCHHH
Confidence 57 67776666655554432 59999999999976521100 00 0 00 00000 01111223678899
Q ss_pred HHHHHHHHHcCC-C--CCc-eEEeeCC
Q 020476 231 IVNLIYEALSNP-S--YRG-VINGTAP 253 (325)
Q Consensus 231 ~a~a~~~~~~~~-~--~~~-~~~~~~~ 253 (325)
++.++..++... . ..| ++.+.+|
T Consensus 230 va~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 230 HTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred HhhhhhheecccccCcccceEEEEcCc
Confidence 999999998755 2 334 6666655
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.1e-13 Score=115.97 Aligned_cols=196 Identities=16% Similarity=0.168 Sum_probs=126.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeec--CCchhHhh-------hC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIA--EEPQWRDC-------IQ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~--d~~~~~~~-------~~ 85 (325)
.++++||||+|+||.+++++|++.|++|++++|+..+..... ... ....+..+|+. +.+.+.++ +.
T Consensus 12 ~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 91 (247)
T PRK08945 12 DRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIEEQFG 91 (247)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999999999999875432221 100 00112234554 44444333 23
Q ss_pred CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
.+|+|||+|+.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||.... ++
T Consensus 92 ~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~--~~~~~iv~~ss~~~~-~~---------- 158 (247)
T PRK08945 92 RLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLK--SPAASLVFTSSSVGR-QG---------- 158 (247)
T ss_pred CCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--CCCCEEEEEccHhhc-CC----------
Confidence 68999999986422 13345567888999999977777765 34 456789999987541 22
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.+....| .+|...+.....+... .+++++.++|+.+-.+.... . ... .....+...+|+++
T Consensus 159 ~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~---~------~~~------~~~~~~~~~~~~~~ 223 (247)
T PRK08945 159 RANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRAS---A------FPG------EDPQKLKTPEDIMP 223 (247)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhh---h------cCc------ccccCCCCHHHHHH
Confidence 1223457 6676666555544433 37899999999876542100 0 000 00123678899999
Q ss_pred HHHHHHcCCC
Q 020476 234 LIYEALSNPS 243 (325)
Q Consensus 234 a~~~~~~~~~ 243 (325)
.+..++.+..
T Consensus 224 ~~~~~~~~~~ 233 (247)
T PRK08945 224 LYLYLMGDDS 233 (247)
T ss_pred HHHHHhCccc
Confidence 9999986543
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=7.5e-14 Score=117.83 Aligned_cols=217 Identities=16% Similarity=0.071 Sum_probs=136.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----C-CCccccCceeecCCchhHhhhC---CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G-KKTRFFPGVMIAEEPQWRDCIQ---GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~-~~~~~~~~~d~~d~~~~~~~~~---~~d~v 90 (325)
..++++|||++|.||.++++.|++.|++|++++|++++...... . ........+|+.|.+++.++++ .+|++
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l 85 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL 85 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence 34799999999999999999999999999999998754432111 0 1111134578888888877664 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.+...+++|+.+...+.+++ ++ .+.+++|++||... .. . .+....
T Consensus 86 v~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~iss~~~--~~--~-------~~~~~~ 152 (259)
T PRK06125 86 VNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKA--RGSGVIVNVIGAAG--EN--P-------DADYIC 152 (259)
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEecCccc--cC--C-------CCCchH
Confidence 999986422 33456677888999999887777765 33 33457888887654 11 0 111233
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-c-----ch--HHHH-HHHcCCCCCCCcceeeeccHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-A-----KM--IPLF-MMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~-----~~--~~~~-~~~~~~~~~~~~~~~~~v~v~D 230 (325)
| .+|...+........ ..+++++.+.||.+..+..... . .+ ...+ ......+ ...+...+|
T Consensus 153 y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 226 (259)
T PRK06125 153 GSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLP------LGRPATPEE 226 (259)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCC------cCCCcCHHH
Confidence 4 456555444443332 3589999999999876521000 0 00 0000 0011111 123678899
Q ss_pred HHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 231 IVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 231 ~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++++++.++.... .+| .+.+.++.
T Consensus 227 va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 227 VADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred HHHHHHHHcCchhccccCceEEecCCe
Confidence 9999999987532 345 66666553
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.7e-14 Score=119.16 Aligned_cols=169 Identities=12% Similarity=0.066 Sum_probs=115.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~~a 94 (325)
|++++||||+|+||+++++.|+++|++|++++|++.......... ......+|+.|.+++.++++ ++|+|||+|
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~a 79 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALP-GVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNA 79 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhcc-ccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcC
Confidence 468999999999999999999999999999999876543322111 11244578888887776654 589999999
Q ss_pred CCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 95 GTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 95 ~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
|.... .....+.....+++|+.++..+++++.... .+...++++||. +|..... .....+.| .+|
T Consensus 80 g~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~----~g~~~~~----~~~~~~~Y~~sK 151 (225)
T PRK08177 80 GISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQ----LGSVELP----DGGEMPLYKASK 151 (225)
T ss_pred cccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccC----ccccccC----CCCCccchHHHH
Confidence 87422 122345667778899999888888775421 233567777764 2221110 11123457 777
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCC
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKD 197 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~ 197 (325)
...+.+...+..+ .++.+..++||++-.+.
T Consensus 152 ~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~ 184 (225)
T PRK08177 152 AALNSMTRSFVAELGEPTLTVLSMHPGWVKTDM 184 (225)
T ss_pred HHHHHHHHHHHHHhhcCCeEEEEEcCCceecCC
Confidence 7777666655443 47999999999987653
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=8.6e-14 Score=118.13 Aligned_cols=218 Identities=12% Similarity=0.051 Sum_probs=139.0
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+ +-||.++++.|+++|++|++..|+... ...+...........+|+.|++++.++++ .+
T Consensus 10 ~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 89 (272)
T PRK08159 10 GKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWGKL 89 (272)
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 3689999997 799999999999999999988876321 11111111111134689999888776653 58
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .+.+.+.+...+++|+.++..+++++.......+++|++||.+. .. ..|.
T Consensus 90 D~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~--~~---------~~p~ 158 (272)
T PRK08159 90 DFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGA--EK---------VMPH 158 (272)
T ss_pred cEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEecccc--cc---------CCCc
Confidence 999999996421 23355678889999999999998877653233468999988643 21 1122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHH-cCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-AGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|.........+..+ .++++..+.||.+..+............... ...|+ ..+...+|+|+++
T Consensus 159 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peevA~~~ 232 (272)
T PRK08159 159 YNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIEEVGDSA 232 (272)
T ss_pred chhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcc------cccCCHHHHHHHH
Confidence 3456 6676665555544443 4899999999998754211111100001111 11121 1257889999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.... ..| ++.+.++.
T Consensus 233 ~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 233 LYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred HHHhCccccCccceEEEECCCc
Confidence 99997543 345 66666664
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.2e-13 Score=116.59 Aligned_cols=217 Identities=12% Similarity=0.013 Sum_probs=138.0
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||++ -||.++++.|+++|++|++..|+... ...+...........+|+.|++++.++++ ++
T Consensus 8 ~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (260)
T PRK06603 8 GKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGSF 87 (260)
T ss_pred CcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence 46899999997 79999999999999999998886321 11111110111134689999988776653 58
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++||+|+.... .+.+.+.+...+++|+.+...+++++.......+++|++||... .. ..+.
T Consensus 88 DilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~---------~~~~ 156 (260)
T PRK06603 88 DFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGA--EK---------VIPN 156 (260)
T ss_pred cEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCcc--cc---------CCCc
Confidence 999999986421 23356678889999999988888776432122368999998654 21 0122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++..+.||.+-.+........-... ......|+ ..+...+|+|+++
T Consensus 157 ~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~~ 230 (260)
T PRK06603 157 YNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPL------KRNTTQEDVGGAA 230 (260)
T ss_pred ccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCc------CCCCCHHHHHHHH
Confidence 3457 6777666555554443 4899999999998665211100100111 11111121 2257789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCC
Q 020476 236 YEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~ 253 (325)
+.++.... ..| .+.+.++
T Consensus 231 ~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 231 VYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred HHHhCcccccCcceEEEeCCc
Confidence 99997533 344 5556555
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.60 E-value=1.4e-13 Score=116.15 Aligned_cols=217 Identities=14% Similarity=0.078 Sum_probs=136.0
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||++ -||.++++.|+++|++|++..|+.. ................+|+.|++++.++++ ++
T Consensus 6 ~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 85 (262)
T PRK07984 6 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPKF 85 (262)
T ss_pred CCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCCC
Confidence 36899999985 8999999999999999998888632 111111111111234689999988876653 47
Q ss_pred CEEEECCCCCCCC--------CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|++|||||..... ....+.++..+++|+.+...+.+++..+.....++|++||.+. .. ..+
T Consensus 86 D~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~--~~---------~~~ 154 (262)
T PRK07984 86 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ER---------AIP 154 (262)
T ss_pred CEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC--CC---------CCC
Confidence 9999999964221 1234556778889999887777766432122367889887653 11 012
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+........+ .++++..+.||.+..+............. .....|. ..+...+|++++
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~ 228 (262)
T PRK07984 155 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGNS 228 (262)
T ss_pred CcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCC------cCCCCHHHHHHH
Confidence 23457 6777776666655553 48999999999886642111111111111 1111121 236788999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCC
Q 020476 235 IYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+..++.... ..| .+.+.++
T Consensus 229 ~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 229 AAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred HHHHcCcccccccCcEEEECCC
Confidence 999987533 344 5555555
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=9.7e-14 Score=117.09 Aligned_cols=218 Identities=13% Similarity=0.066 Sum_probs=137.6
Q ss_pred CCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCCC---cccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS---KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~---~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++|||| ++-||.++++.|++.|++|++..|... ................+|+.|++++.++++ ++
T Consensus 6 ~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (260)
T PRK06997 6 GKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDGL 85 (260)
T ss_pred CcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999996 679999999999999999998865422 111111110011134689999998876663 58
Q ss_pred CEEEECCCCCCC--------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~--------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|++|||||.... ...+.+.+...+++|+.++..+.+++.......+++|++||... .. ..+
T Consensus 86 D~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~--~~---------~~~ 154 (260)
T PRK06997 86 DGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ER---------VVP 154 (260)
T ss_pred cEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc--cc---------CCC
Confidence 999999997422 12345567788999999988887776543223468999998654 11 012
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|.........+..+ .++++..+.||.+-.+........-.... .....|+ ..+...+|++++
T Consensus 155 ~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~ 228 (260)
T PRK06997 155 NYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPL------RRNVTIEEVGNV 228 (260)
T ss_pred CcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcc------cccCCHHHHHHH
Confidence 23457 6777666665555543 48999999999887642111100000011 1111111 226788999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+..++..+. ..| ++.+.++.
T Consensus 229 ~~~l~s~~~~~itG~~i~vdgg~ 251 (260)
T PRK06997 229 AAFLLSDLASGVTGEITHVDSGF 251 (260)
T ss_pred HHHHhCccccCcceeEEEEcCCh
Confidence 999997633 334 66665553
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.2e-14 Score=121.35 Aligned_cols=220 Identities=16% Similarity=0.062 Sum_probs=138.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++++||||+|+||.++++.|+++|++|++++|+.+....+... ........+|+.|.+++.++++ ++|+
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 3457999999999999999999999999999999987544332221 1111134578888776665553 6799
Q ss_pred EEECCCCCCC-C---CCCh----hhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 90 VVNLAGTPIG-T---RWSS----EIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 90 vi~~a~~~~~-~---~~~~----~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|||||.... . .... +.++..+++|+.++..+++++.... ...+++|++||.... ++. +.
T Consensus 83 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~-~~~----------~~ 151 (262)
T TIGR03325 83 LIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF-YPN----------GG 151 (262)
T ss_pred EEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee-cCC----------CC
Confidence 9999986321 1 1111 2467789999999999888876421 123578888886541 221 12
Q ss_pred CCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcc-----cch---HHHHHHHcCCCCCCCcceeeeccHH
Q 020476 161 GNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL-----AKM---IPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
...| .+|...+.....+..+. .+++..+.||.+..+-.... ... .+....... ......+...+
T Consensus 152 ~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~p~~r~~~p~ 226 (262)
T TIGR03325 152 GPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKS-----VLPIGRMPDAE 226 (262)
T ss_pred CchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhh-----cCCCCCCCChH
Confidence 3457 67777776666665543 48999999999876532110 000 000010100 01112367789
Q ss_pred HHHHHHHHHHcCCC---CCc-eEEeeCC
Q 020476 230 DIVNLIYEALSNPS---YRG-VINGTAP 253 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~-~~~~~~~ 253 (325)
|+|.+++.++.++. ..| ++.+.++
T Consensus 227 eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 227 EYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred HhhhheeeeecCCCcccccceEEEecCC
Confidence 99999998887532 244 6666555
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=1.6e-13 Score=115.51 Aligned_cols=217 Identities=10% Similarity=0.006 Sum_probs=136.1
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcc---cccCCC--CCccccCceeecCCchhHhhhC-------
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPG--KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~--~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
.++++||||+ +-||.+++++|+++|++|++..|+.... ...... ........+|+.|++++.++++
T Consensus 7 ~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 86 (257)
T PRK08594 7 GKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEVG 86 (257)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCC
Confidence 4689999997 8999999999999999999998754221 111110 1111244689999988776653
Q ss_pred CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++|||||.... .+.+.+.+...+++|+.+...+.+++........++|++||.... .+ .
T Consensus 87 ~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-~~----------~ 155 (257)
T PRK08594 87 VIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE-RV----------V 155 (257)
T ss_pred CccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc-cC----------C
Confidence 58999999986421 223445567778899998887776665432223689999987541 11 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .|+++..+.||.+..+............. .....| ...+...+|+++
T Consensus 156 ~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p------~~r~~~p~~va~ 229 (257)
T PRK08594 156 QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAP------LRRTTTQEEVGD 229 (257)
T ss_pred CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCC------ccccCCHHHHHH
Confidence 223457 6777766666555543 48999999999887652110000000001 011111 123578899999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+++.++.... ..| ++.+.++
T Consensus 230 ~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 230 TAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHHcCcccccccceEEEECCc
Confidence 9999987543 344 5555544
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2e-13 Score=115.31 Aligned_cols=218 Identities=13% Similarity=0.064 Sum_probs=133.7
Q ss_pred CCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++|||| ++.||.++++.|+++|++|++..|..... ..............+|+.|++++.++++ ++
T Consensus 6 ~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 85 (261)
T PRK08690 6 GKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDGL 85 (261)
T ss_pred CcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 368999997 67999999999999999999887753211 1111111111234689999988876653 58
Q ss_pred CEEEECCCCCCCC--------CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 88 TAVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 88 d~vi~~a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
|++|||||..... ....+.+...+++|+.+...+.+++... ....+++|++||... ... .
T Consensus 86 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~~--~~~---------~ 154 (261)
T PRK08690 86 DGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLGA--VRA---------I 154 (261)
T ss_pred cEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEccccc--ccC---------C
Confidence 9999999975321 1233456667788988877666654321 122357888887654 211 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+........ ..|+++..+.||.+-.+............. .....|+ ..+...+|+|+
T Consensus 155 ~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~peevA~ 228 (261)
T PRK08690 155 PNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPL------RRNVTIEEVGN 228 (261)
T ss_pred CCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCC------CCCCCHHHHHH
Confidence 233457 677666655544433 348999999999987652111100011111 1111121 23678999999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++..++.... ..| ++.+.+|.
T Consensus 229 ~v~~l~s~~~~~~tG~~i~vdgG~ 252 (261)
T PRK08690 229 TAAFLLSDLSSGITGEITYVDGGY 252 (261)
T ss_pred HHHHHhCcccCCcceeEEEEcCCc
Confidence 9999998543 344 66555553
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.58 E-value=9.9e-14 Score=114.88 Aligned_cols=205 Identities=17% Similarity=0.130 Sum_probs=131.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCC-Cc-cccCceeecCCchhHhhh-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK-KT-RFFPGVMIAEEPQWRDCI------- 84 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~-~~-~~~~~~d~~d~~~~~~~~------- 84 (325)
...+.|+|||||+.||.+++.+|+++|.+++.+.|..+..+.. .... .. .....+|+.|.++..+.+
T Consensus 10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 4457899999999999999999999999988888877665444 1111 11 224468999999887554
Q ss_pred CCCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHH----HHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 85 QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSK----VVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~----ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
.++|++|||||.... ...........+++|+.|+.. ++..+++ .+.+++|.+||.... .+
T Consensus 90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~--r~~GhIVvisSiaG~-~~---------- 156 (282)
T KOG1205|consen 90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKK--RNDGHIVVISSIAGK-MP---------- 156 (282)
T ss_pred CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhh--cCCCeEEEEeccccc-cC----------
Confidence 379999999998643 222344566688999887554 5555566 456899999998751 11
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhcCCceEE----EEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVNKDVRLA----LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~----ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.|..+.| .+|.+.+...+.++.+..-..+ ++-||.|-..... ..+....+. ..........|++
T Consensus 157 ~P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~------~~~~~~~~~-----~~~~~~~~~~~~~ 225 (282)
T KOG1205|consen 157 LPFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTG------KELLGEEGK-----SQQGPFLRTEDVA 225 (282)
T ss_pred CCcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccc------hhhcccccc-----ccccchhhhhhhh
Confidence 2334467 7888888777777776533222 4667766544210 001101110 2233455556664
Q ss_pred H--HHHHHHcCCCCCc
Q 020476 233 N--LIYEALSNPSYRG 246 (325)
Q Consensus 233 ~--a~~~~~~~~~~~~ 246 (325)
. ++...+..+...+
T Consensus 226 ~~~~~~~~i~~~~~~~ 241 (282)
T KOG1205|consen 226 DPEAVAYAISTPPCRQ 241 (282)
T ss_pred hHHHHHHHHhcCcccc
Confidence 4 7777777765333
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=2.7e-14 Score=123.69 Aligned_cols=177 Identities=15% Similarity=0.064 Sum_probs=118.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----C--CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G--KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++||||+|.||.+++++|+++|++|+++.|+.++...... . .....+..+|+.|.+++.++++
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 35789999999999999999999999999999998654322111 0 0111245689989888776653
Q ss_pred CCCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCC--C
Q 020476 86 GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSP--S 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~--~ 160 (325)
.+|++||+||..... ....+..+..+++|+.+...+.+.+... ..+..++|++||.... ++......+.++.+ .
T Consensus 93 ~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~-~~~~~~~~~~~~~~~~~ 171 (313)
T PRK05854 93 PIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAAR-RGAINWDDLNWERSYAG 171 (313)
T ss_pred CccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhc-CCCcCcccccccccCcc
Confidence 489999999975321 2345667888999999977666555421 0234689999998652 33211112222222 2
Q ss_pred CCch-HHHHHHHHHHHHHhh-----cCCceEEEEEeceEEcC
Q 020476 161 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGK 196 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~i~g~ 196 (325)
...| .+|.........+.. ..++.+..+.||.+..+
T Consensus 172 ~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 172 MRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 3457 777776666555443 24799999999998765
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-13 Score=116.31 Aligned_cols=213 Identities=17% Similarity=0.022 Sum_probs=133.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~------~~ 87 (325)
..++++||||+|+||.+++++|+++|++|++.+|+... .... ...........+|+.|.+.+.++++ ++
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999875432 1111 1111111244678888887776653 58
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-------CCCCEEEEeeeeeeeecCCCCceec
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-------GVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-------~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
|+||||||.... .....+.+...+++|+.++..+++++.... . ..+++|++||... +...
T Consensus 91 D~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~------ 162 (306)
T PRK07792 91 DIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSSEAG--LVGP------ 162 (306)
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECCccc--ccCC------
Confidence 999999997533 223456778889999999999888764210 0 1258999998764 2211
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
+....| .+|...+.....+..+ .|+++..+.|+. .... ...... ..+-. ......++..+|+
T Consensus 163 ---~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~--~t~~--~~~~~~------~~~~~-~~~~~~~~~pe~v 228 (306)
T PRK07792 163 ---VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA--RTAM--TADVFG------DAPDV-EAGGIDPLSPEHV 228 (306)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC--CCch--hhhhcc------ccchh-hhhccCCCCHHHH
Confidence 223467 6777666665554443 589999999972 1110 000000 00000 0011235689999
Q ss_pred HHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 232 VNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 232 a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+.++..++.... ..| +|.+.++
T Consensus 229 a~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 229 VPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred HHHHHHHcCccccCCCCCEEEEcCC
Confidence 999998886532 233 6656544
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.2e-13 Score=115.56 Aligned_cols=217 Identities=14% Similarity=0.072 Sum_probs=131.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-Cccccc----CCC-CCccccCceeecCCchh----Hhhh------
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELI----FPG-KKTRFFPGVMIAEEPQW----RDCI------ 84 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~----~~~-~~~~~~~~~d~~d~~~~----~~~~------ 84 (325)
+.++||||+|+||.++++.|+++|++|+++.|+. +..... ... ........+|+.|.+.+ .+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 4799999999999999999999999999987653 222111 100 00111345789988744 2222
Q ss_pred -CCCCEEEECCCCCCCCCC---Ch-----------hhHHHHHHHhhHHHHHHHHHHhcCC--C------CCCCEEEEeee
Q 020476 85 -QGSTAVVNLAGTPIGTRW---SS-----------EIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLVSAT 141 (325)
Q Consensus 85 -~~~d~vi~~a~~~~~~~~---~~-----------~~~~~~~~~nv~~~~~ll~~~~~~~--~------~~~~~v~~Ss~ 141 (325)
.++|+||||||....... .. ......+++|+.++..+++++.... . ...+++++||.
T Consensus 82 ~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~ 161 (267)
T TIGR02685 82 FGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDA 161 (267)
T ss_pred cCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccCCCCeEEEEehhh
Confidence 368999999996422111 11 1356778999999888887654321 0 12346666655
Q ss_pred eeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCC
Q 020476 142 ALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG 217 (325)
Q Consensus 142 ~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~ 217 (325)
.. .. ..+....| .+|...+.+...+..+ .|++++.++||.+..+.... ......+ ....++.
T Consensus 162 ~~--~~---------~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~-~~~~~~~--~~~~~~~ 227 (267)
T TIGR02685 162 MT--DQ---------PLLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMP-FEVQEDY--RRKVPLG 227 (267)
T ss_pred hc--cC---------CCcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccc-hhHHHHH--HHhCCCC
Confidence 33 11 11234467 7787777666665554 58999999999987553211 1111111 1111211
Q ss_pred CCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCCC
Q 020476 218 SGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 218 ~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~ 256 (325)
......+|++++++.++..+. ..| .+.+.++..+
T Consensus 228 -----~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~~~ 264 (267)
T TIGR02685 228 -----QREASAEQIADVVIFLVSPKAKYITGTCIKVDGGLSL 264 (267)
T ss_pred -----cCCCCHHHHHHHHHHHhCcccCCcccceEEECCceec
Confidence 124688999999999997643 344 6666655443
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=5.2e-14 Score=134.42 Aligned_cols=194 Identities=13% Similarity=0.105 Sum_probs=134.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||.++++.|+++|++|++++|+++....... .........+|+.|.+++.++++ ++|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998755322211 01111244689999988877665 689
Q ss_pred EEEECCCCCCCCCC-----ChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 89 AVVNLAGTPIGTRW-----SSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 89 ~vi~~a~~~~~~~~-----~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|||||....... ..+.....+++|+.++.++++++ ++ .+.+++|++||.+. +... +
T Consensus 451 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~ 517 (657)
T PRK07201 451 YLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRE--RRFGHVVNVSSIGV--QTNA---------P 517 (657)
T ss_pred EEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhh--cCCCEEEEECChhh--cCCC---------C
Confidence 99999996422111 13456788899999987776654 44 45678999999876 5422 2
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .++++++++||.+..+....... . .....+..+++|+.+
T Consensus 518 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~~~------------~----~~~~~~~~~~~a~~i 581 (657)
T PRK07201 518 RFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPTKR------------Y----NNVPTISPEEAADMV 581 (657)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcccc------------c----cCCCCCCHHHHHHHH
Confidence 24457 6777666655554443 48999999999998763211100 0 011357899999999
Q ss_pred HHHHcCC
Q 020476 236 YEALSNP 242 (325)
Q Consensus 236 ~~~~~~~ 242 (325)
+..+.+.
T Consensus 582 ~~~~~~~ 588 (657)
T PRK07201 582 VRAIVEK 588 (657)
T ss_pred HHHHHhC
Confidence 9988654
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=6.3e-13 Score=110.50 Aligned_cols=206 Identities=10% Similarity=0.056 Sum_probs=128.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh---CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---~~~d~vi~~a~ 95 (325)
|+++||||+|+||++++++|++++ ..|....|+...... . ....+..+|+.+.+++.++. .++|+||||||
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~~~--~--~~~~~~~~Dls~~~~~~~~~~~~~~id~li~~aG 76 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPDFQ--H--DNVQWHALDVTDEAEIKQLSEQFTQLDWLINCVG 76 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccccc--c--CceEEEEecCCCHHHHHHHHHhcCCCCEEEECCc
Confidence 589999999999999999999985 566666665533211 0 11124568998888776644 47899999999
Q ss_pred CCCCC---------CCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 96 TPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 96 ~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
..... ....+.....+++|+.+...+.+.+.... .+.++++++||... .... +..+....|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~----~~~~----~~~~~~~~Y 148 (235)
T PRK09009 77 MLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVG----SISD----NRLGGWYSY 148 (235)
T ss_pred cccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccc----cccc----CCCCCcchh
Confidence 75321 11234456778899888777766654421 33467888887432 1110 011223356
Q ss_pred -HHHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.+|...+.....+..+ .++.+..+.||.+..+..... ....+ ...+...+|+|++++.+
T Consensus 149 ~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~---------~~~~~------~~~~~~~~~~a~~~~~l 213 (235)
T PRK09009 149 RASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF---------QQNVP------KGKLFTPEYVAQCLLGI 213 (235)
T ss_pred hhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch---------hhccc------cCCCCCHHHHHHHHHHH
Confidence 5666665555444432 478899999999876642110 01111 12357889999999999
Q ss_pred HcCCC--CCceEEeeCC
Q 020476 239 LSNPS--YRGVINGTAP 253 (325)
Q Consensus 239 ~~~~~--~~~~~~~~~~ 253 (325)
+.... ..|.+....+
T Consensus 214 ~~~~~~~~~g~~~~~~g 230 (235)
T PRK09009 214 IANATPAQSGSFLAYDG 230 (235)
T ss_pred HHcCChhhCCcEEeeCC
Confidence 98763 3454433333
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.3e-13 Score=117.91 Aligned_cols=224 Identities=16% Similarity=0.151 Sum_probs=133.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhh-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI-------QG 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~-------~~ 86 (325)
|.++++||||++.||.++++.|+++| ++|++++|+.++....... ........+|+.|.+++.+++ .+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 81 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRP 81 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 35689999999999999999999999 9999999987543222111 011113457888888776554 25
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCC----ce-
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSET----EV- 153 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~----~~- 153 (325)
+|++||+||.... ...+.+..+..+++|+.++..++++ +++...+.+++|++||... +..... .+
T Consensus 82 iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~ 159 (314)
T TIGR01289 82 LDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITG--NTNTLAGNVPPKA 159 (314)
T ss_pred CCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcc--ccccCCCcCCCcc
Confidence 8999999996422 1234567788899999987666544 4441012469999999865 321100 00
Q ss_pred -----------------ecCCCC--CCCch-HHHHHHHHHHHHHhh----cCCceEEEEEeceEEcCCC-CcccchHH-H
Q 020476 154 -----------------FDESSP--SGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GALAKMIP-L 207 (325)
Q Consensus 154 -----------------~~e~~~--~~~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~i~g~~~-~~~~~~~~-~ 207 (325)
..+..+ +...| .+|.........+.+ ..++.++.++||.|...+- ........ .
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~~~~~~~~~~~ 239 (314)
T TIGR01289 160 NLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLFREHVPLFRTL 239 (314)
T ss_pred cccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCcccccccHHHHHH
Confidence 011111 22346 677665444433332 2479999999999864321 11111110 1
Q ss_pred HHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCceEEe
Q 020476 208 FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVING 250 (325)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~~~ 250 (325)
+..... .. ...+...++.++.++.++..+. .+|.|.-
T Consensus 240 ~~~~~~-~~-----~~~~~~~~~~a~~l~~~~~~~~~~~~g~~~~ 278 (314)
T TIGR01289 240 FPPFQK-YI-----TKGYVSEEEAGERLAQVVSDPKLKKSGVYWS 278 (314)
T ss_pred HHHHHH-HH-----hccccchhhhhhhhHHhhcCcccCCCceeee
Confidence 110000 00 0125678899999999887643 3465543
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.3e-13 Score=111.58 Aligned_cols=211 Identities=11% Similarity=0.055 Sum_probs=132.1
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCc--------cc---c----cCCCCCccccCceeecCCchhHh
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK--------AE---L----IFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~--------~~---~----~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
.++++||||+| .||.+++++|+++|++|+++.|.... .. . ............+|+.|.+++.+
T Consensus 6 ~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i~~ 85 (256)
T PRK12859 6 NKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAPKE 85 (256)
T ss_pred CcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 46899999995 79999999999999999987643210 00 0 01111111134578888887776
Q ss_pred hhC-------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecC
Q 020476 83 CIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGT 148 (325)
Q Consensus 83 ~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~ 148 (325)
+++ .+|+|||+||.... .....+.....+++|+.+...+. ..+++ .+.+++|++||... ..
T Consensus 86 ~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~- 160 (256)
T PRK12859 86 LLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDK--KSGGRIINMTSGQF--QG- 160 (256)
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhh--cCCeEEEEEccccc--CC-
Confidence 653 47999999997532 23445567778999999877664 44443 34568999999764 21
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceee
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS 224 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
..+....| .+|...+.....+..+ .+++++.++||.+-.+... ..... ......++ ..
T Consensus 161 --------~~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~--~~~~~--~~~~~~~~------~~ 222 (256)
T PRK12859 161 --------PMVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMT--EEIKQ--GLLPMFPF------GR 222 (256)
T ss_pred --------CCCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCC--HHHHH--HHHhcCCC------CC
Confidence 11234567 6777666555444433 4899999999988654211 11111 11111111 12
Q ss_pred eccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 225 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+...+|+++++..++.... ..| ++.+.++
T Consensus 223 ~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 223 IGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred CcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 4678999999999887643 344 5544443
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.9e-13 Score=116.30 Aligned_cols=223 Identities=17% Similarity=0.099 Sum_probs=136.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------~~d 88 (325)
|.+.++|||| |+||+++++.|. +|++|++++|++++..... ..........+|+.|.+++.++++ ++|
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id 78 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVT 78 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCC
Confidence 3467899997 799999999996 7999999999865432221 111111234689999888776653 589
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC----c---eec------
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----E---VFD------ 155 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~----~---~~~------ 155 (325)
++|||||... ....+...+++|+.++.++++++.......+++|++||.... .+.... . ..+
T Consensus 79 ~li~nAG~~~----~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 153 (275)
T PRK06940 79 GLVHTAGVSP----SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGH-RLPALTAEQERALATTPTEELLS 153 (275)
T ss_pred EEEECCCcCC----chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccc-cCcccchhhhccccccccccccc
Confidence 9999999641 235678899999999999988876531122567888887542 211000 0 000
Q ss_pred -----CCC--CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCc-ccch-HHHH-HHHcCCCCCCCcc
Q 020476 156 -----ESS--PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-LAKM-IPLF-MMFAGGPLGSGQQ 221 (325)
Q Consensus 156 -----e~~--~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~-~~~~-~~~~-~~~~~~~~~~~~~ 221 (325)
+.. +....| .+|...+.....+.. ..++++..+.||.+..+.... .... -... ......|+
T Consensus 154 ~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~----- 228 (275)
T PRK06940 154 LPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAKSPA----- 228 (275)
T ss_pred cccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhhCCc-----
Confidence 000 123457 677765555444333 248999999999997763211 1000 0001 11111121
Q ss_pred eeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 222 WFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
..+...+|+|+++..++.... ..| ++.+.++.
T Consensus 229 -~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg~ 263 (275)
T PRK06940 229 -GRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGGA 263 (275)
T ss_pred -ccCCCHHHHHHHHHHHcCcccCcccCceEEEcCCe
Confidence 236788999999999986533 344 66666553
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.54 E-value=3e-13 Score=115.75 Aligned_cols=214 Identities=19% Similarity=0.076 Sum_probs=133.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC---------CcccccC----CCCCccccCceeecCCchhHhhhC-
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~- 85 (325)
.++++||||++.||.++++.|++.|++|++++|+. +...... ..........+|+.|.+++.++++
T Consensus 6 ~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 85 (286)
T PRK07791 6 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLVDA 85 (286)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHH
Confidence 46899999999999999999999999999998765 2111111 111111234578988887766553
Q ss_pred ------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C------CCCCEEEEeeeeeeeecC
Q 020476 86 ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLVSATALGYYGT 148 (325)
Q Consensus 86 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~------~~~~~v~~Ss~~v~~~g~ 148 (325)
++|++|||||.... .+...+.+...+++|+.++..+.+++.... . ...++|++||.... .+.
T Consensus 86 ~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~-~~~ 164 (286)
T PRK07791 86 AVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIINTSSGAGL-QGS 164 (286)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEEeCchhhC-cCC
Confidence 58999999997532 234566788899999999887776653210 1 12579999987641 221
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceee
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFS 224 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
+....| .+|...+.....+..+ .|+++..+.|+ +..+. ....... .....+. ....
T Consensus 165 ----------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~---~~~~~~~--~~~~~~~----~~~~ 224 (286)
T PRK07791 165 ----------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRM---TETVFAE--MMAKPEE----GEFD 224 (286)
T ss_pred ----------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCc---chhhHHH--HHhcCcc----cccC
Confidence 123457 6776666555554443 58999999998 42221 1111111 1111111 1113
Q ss_pred eccHHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 225 WIHLDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
....+|++++++.++.... ..| .+.+.++.
T Consensus 225 ~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 257 (286)
T PRK07791 225 AMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257 (286)
T ss_pred CCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence 5679999999999987532 445 55565554
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=107.88 Aligned_cols=215 Identities=18% Similarity=0.188 Sum_probs=148.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
.+.++.|+.||.|+++++.....++.|-.+.|+..+.. +........|..+|....+-+...+.++..++.+++..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~-l~sw~~~vswh~gnsfssn~~k~~l~g~t~v~e~~ggf--- 128 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT-LSSWPTYVSWHRGNSFSSNPNKLKLSGPTFVYEMMGGF--- 128 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch-hhCCCcccchhhccccccCcchhhhcCCcccHHHhcCc---
Confidence 37899999999999999999999999999999876421 11112222266778777777777888999999998743
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhh
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV 179 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~ 179 (325)
.+...+.++|-....+.+.++++ .++++|+|+|... ||-..- ....| .+|+.+|.|....
T Consensus 129 ----gn~~~m~~ing~ani~a~kaa~~--~gv~~fvyISa~d---~~~~~~--------i~rGY~~gKR~AE~Ell~~-- 189 (283)
T KOG4288|consen 129 ----GNIILMDRINGTANINAVKAAAK--AGVPRFVYISAHD---FGLPPL--------IPRGYIEGKREAEAELLKK-- 189 (283)
T ss_pred ----cchHHHHHhccHhhHHHHHHHHH--cCCceEEEEEhhh---cCCCCc--------cchhhhccchHHHHHHHHh--
Confidence 23567888999999999999999 8999999999765 331111 11245 6776666665433
Q ss_pred cCCceEEEEEeceEEcCCC--C---cccchH-HHHHHHcC--CCC----CCCcceeeeccHHHHHHHHHHHHcCCCCCce
Q 020476 180 NKDVRLALIRIGIVLGKDG--G---ALAKMI-PLFMMFAG--GPL----GSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 247 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~~--~---~~~~~~-~~~~~~~~--~~~----~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~ 247 (325)
++.+-+++|||++||... + ++..+. ++....+. +|+ .-+.-...++.++++|.+.+.++++|.-.|+
T Consensus 190 -~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~f~Gv 268 (283)
T KOG4288|consen 190 -FRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPDFKGV 268 (283)
T ss_pred -cCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCCcCce
Confidence 468889999999999742 1 111111 11111111 121 2345567899999999999999999875555
Q ss_pred EEeeCCCCCCHHHHHHHHHH
Q 020476 248 INGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 248 ~~~~~~~~~s~~e~~~~i~~ 267 (325)
+ ++.|+.++.++
T Consensus 269 v--------~i~eI~~~a~k 280 (283)
T KOG4288|consen 269 V--------TIEEIKKAAHK 280 (283)
T ss_pred e--------eHHHHHHHHHH
Confidence 4 45555554433
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.52 E-value=2.3e-12 Score=108.49 Aligned_cols=217 Identities=14% Similarity=0.051 Sum_probs=133.6
Q ss_pred CCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCCC--cccccCCC-CCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRS--KAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~--~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++|||| ++.||.++++.|+++|++|++.+|+.. ..+..... ........+|+.|++++.++++ ++
T Consensus 7 ~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~i 86 (256)
T PRK07889 7 GKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDGL 86 (256)
T ss_pred CCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999 899999999999999999999987642 11111110 0111245689999887776543 58
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .+...+.....+++|+.++..+.+++.......+++|++|+... .+ .+.
T Consensus 87 D~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~~--~~----------~~~ 154 (256)
T PRK07889 87 DGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDAT--VA----------WPA 154 (256)
T ss_pred cEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeeccc--cc----------CCc
Confidence 999999997421 12234556677899999988877766543122357888875432 11 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|............+ .|+++..+.||.+..+............. .....|+ .+.+...+|+|+++
T Consensus 155 ~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~-----~~~~~~p~evA~~v 229 (256)
T PRK07889 155 YDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPL-----GWDVKDPTPVARAV 229 (256)
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCcc-----ccccCCHHHHHHHH
Confidence 3345 6676655555444443 48999999999987653111100000001 1111111 11357899999999
Q ss_pred HHHHcCCC--CCc-eEEeeCC
Q 020476 236 YEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~ 253 (325)
+.++.+.. ..| ++.+.++
T Consensus 230 ~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 230 VALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred HHHhCcccccccceEEEEcCc
Confidence 99997643 344 5555544
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.1e-13 Score=130.54 Aligned_cols=209 Identities=18% Similarity=0.069 Sum_probs=135.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||++++++|+++|++|++++|+.++...... .........+|+.|++++.++++ .+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 34689999999999999999999999999999998755332211 11111244689999988877664 48
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|++|||||.... .....+.....+++|+.++.++++++.... .+ .+++|++||... +... +..
T Consensus 394 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~~---------~~~ 462 (582)
T PRK05855 394 DIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAA--YAPS---------RSL 462 (582)
T ss_pred cEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--ccCC---------CCC
Confidence 999999997533 233456778888999999888777643210 22 358999999876 5422 224
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc--cch----HHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--AKM----IPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~--~~~----~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
..| .+|...+.....+..+ .|++++.++||.+-.+..... ... ............ .......+|+
T Consensus 463 ~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~p~~v 537 (582)
T PRK05855 463 PAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLY-----QRRGYGPEKV 537 (582)
T ss_pred cHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhc-----cccCCCHHHH
Confidence 567 6777666555544432 489999999998866421110 000 000000000000 0112467999
Q ss_pred HHHHHHHHcCCC
Q 020476 232 VNLIYEALSNPS 243 (325)
Q Consensus 232 a~a~~~~~~~~~ 243 (325)
|++++.++.++.
T Consensus 538 a~~~~~~~~~~~ 549 (582)
T PRK05855 538 AKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHHcCC
Confidence 999999998764
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.52 E-value=5.3e-13 Score=124.00 Aligned_cols=207 Identities=19% Similarity=0.127 Sum_probs=134.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||++.||.++++.|+++|++|++++|+.+........ ........+|+.|++++.++++ ++|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 346899999999999999999999999999999987654332211 1111235689999988776653 58999
Q ss_pred EECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCC-CCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 91 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGV-RPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 91 i~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||||.... .+...+.+...+++|+.++..+++++.... .+. .++|++||.... .+ . +...
T Consensus 84 i~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~-~~-~---------~~~~ 152 (520)
T PRK06484 84 VNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGL-VA-L---------PKRT 152 (520)
T ss_pred EECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccC-CC-C---------CCCc
Confidence 999986311 234566788899999999888877665421 222 389999997651 22 1 1234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc--hHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK--MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+..+ .+++++.++||.+..+....... ...........+ ...+...+|+++++.
T Consensus 153 ~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~va~~v~ 226 (520)
T PRK06484 153 AYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIP------LGRLGRPEEIAEAVF 226 (520)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCC------CCCCcCHHHHHHHHH
Confidence 56 6676666655554443 48999999999886653211000 000000000111 112567899999999
Q ss_pred HHHcCC
Q 020476 237 EALSNP 242 (325)
Q Consensus 237 ~~~~~~ 242 (325)
.++...
T Consensus 227 ~l~~~~ 232 (520)
T PRK06484 227 FLASDQ 232 (520)
T ss_pred HHhCcc
Confidence 888753
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.3e-13 Score=120.36 Aligned_cols=215 Identities=15% Similarity=0.030 Sum_probs=134.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.++++||||+|.||..+++.|+++|++|++++|+.... ........ .....+|+.|.+++.++++ ++|+|
T Consensus 210 g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~-~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 210 GKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVG-GTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcC-CeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 46899999999999999999999999999998854321 11111000 0144679998887776553 58999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||+||.... .....+.....+++|+.++.++.+++... .....++|++||.... ++. +....|
T Consensus 289 i~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~-~g~----------~~~~~Y~ 357 (450)
T PRK08261 289 VHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGI-AGN----------RGQTNYA 357 (450)
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhc-CCC----------CCChHHH
Confidence 999996532 22345667888999999999999988651 1233689999987651 221 123457
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+.. ..++.+..+.||.+-.+............. ..-.++ ......+|+++++..+++.
T Consensus 358 asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~-~~~~~l------~~~~~p~dva~~~~~l~s~ 430 (450)
T PRK08261 358 ASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAG-RRMNSL------QQGGLPVDVAETIAWLASP 430 (450)
T ss_pred HHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHH-hhcCCc------CCCCCHHHHHHHHHHHhCh
Confidence 666544444333332 248999999999875432111110000000 000011 1123467999999998865
Q ss_pred CC--CCc-eEEeeCC
Q 020476 242 PS--YRG-VINGTAP 253 (325)
Q Consensus 242 ~~--~~~-~~~~~~~ 253 (325)
.. .+| ++.+.++
T Consensus 431 ~~~~itG~~i~v~g~ 445 (450)
T PRK08261 431 ASGGVTGNVVRVCGQ 445 (450)
T ss_pred hhcCCCCCEEEECCC
Confidence 33 234 6666554
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.7e-13 Score=107.47 Aligned_cols=160 Identities=17% Similarity=0.131 Sum_probs=110.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccC-------CCCCccccCceeecCCchhHhhhC-------
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF-------PGKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-------~~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
++++|+||+|+||.+++++|+++|. .|+.+.|++....... ..........+|+.+++.+.++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4799999999999999999999986 6888888765432110 111111134578878777766543
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
.+|.|||+|+.... .....+.....+++|+.++..+++++++ .+.++++++||.... ++. +...
T Consensus 81 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~ii~~ss~~~~-~~~----------~~~~ 147 (180)
T smart00822 81 PLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD--LPLDFFVLFSSVAGV-LGN----------PGQA 147 (180)
T ss_pred CeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc--CCcceEEEEccHHHh-cCC----------CCch
Confidence 46999999986422 2334556778899999999999999987 677889999987541 332 1234
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEE
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVL 194 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~ 194 (325)
.| .+|...+...... ...+++++.+.|+.+-
T Consensus 148 ~y~~sk~~~~~~~~~~-~~~~~~~~~~~~g~~~ 179 (180)
T smart00822 148 NYAAANAFLDALAAHR-RARGLPATSINWGAWA 179 (180)
T ss_pred hhHHHHHHHHHHHHHH-HhcCCceEEEeecccc
Confidence 56 5666666655433 3458889999888754
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.51 E-value=8.5e-13 Score=110.47 Aligned_cols=201 Identities=14% Similarity=0.117 Sum_probs=127.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCC-ccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK-TRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~-~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
|+++||||++.||.+++++|+ +|++|++++|+.++...... ... ......+|+.|.+++.++++ ++|
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 689999999999999999998 59999999998765432211 110 11244689999887776542 589
Q ss_pred EEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++||+||..... +...+......++|+.+...++ ..+.+. ...+++|++||... +-. .+..
T Consensus 80 ~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~-~~~g~Iv~isS~~~--~~~---------~~~~ 147 (246)
T PRK05599 80 LAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQ-TAPAAIVAFSSIAG--WRA---------RRAN 147 (246)
T ss_pred EEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhc-CCCCEEEEEecccc--ccC---------CcCC
Confidence 999999975321 1223334455677777765544 444431 12468999999754 211 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .+++++.+.||.+..+..... .+ . .. ....+|+|++++.
T Consensus 148 ~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~------------~~----~-~~-~~~pe~~a~~~~~ 209 (246)
T PRK05599 148 YVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGM------------KP----A-PM-SVYPRDVAAAVVS 209 (246)
T ss_pred cchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCC------------CC----C-CC-CCCHHHHHHHHHH
Confidence 457 6676655555444442 489999999998876521000 00 0 00 2578999999999
Q ss_pred HHcCCCCCceEEeeC
Q 020476 238 ALSNPSYRGVINGTA 252 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~ 252 (325)
++..+...+.+.+.+
T Consensus 210 ~~~~~~~~~~~~~~~ 224 (246)
T PRK05599 210 AITSSKRSTTLWIPG 224 (246)
T ss_pred HHhcCCCCceEEeCc
Confidence 998865444554443
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.9e-13 Score=117.31 Aligned_cols=195 Identities=15% Similarity=0.082 Sum_probs=126.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecC--CchhH---hhhC--C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAE--EPQWR---DCIQ--G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d--~~~~~---~~~~--~ 86 (325)
.+.++||||||.||.+++++|+++|++|++++|++++....... ........+|+.+ .+.+. +.+. +
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~d 132 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGLD 132 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999987654332111 0001123456663 22222 3333 4
Q ss_pred CCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .+.+.+.....+++|+.++..+.+++... ..+.+++|++||... +... ..|
T Consensus 133 idilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~--~~~~-------~~p 203 (320)
T PLN02780 133 VGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAA--IVIP-------SDP 203 (320)
T ss_pred ccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhh--ccCC-------CCc
Confidence 6699999997421 23345567788999999988877765321 045678999999765 3100 012
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .|++++.+.||.+-.+-... . . .. .-....+++|+.+
T Consensus 204 ~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~----------~-~-----~~--~~~~~p~~~A~~~ 265 (320)
T PLN02780 204 LYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASI----------R-R-----SS--FLVPSSDGYARAA 265 (320)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCcccc----------c-C-----CC--CCCCCHHHHHHHH
Confidence 34567 6777666655555443 48999999999987653110 0 0 00 1135789999999
Q ss_pred HHHHcC
Q 020476 236 YEALSN 241 (325)
Q Consensus 236 ~~~~~~ 241 (325)
+..+..
T Consensus 266 ~~~~~~ 271 (320)
T PLN02780 266 LRWVGY 271 (320)
T ss_pred HHHhCC
Confidence 999954
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.2e-13 Score=103.60 Aligned_cols=166 Identities=19% Similarity=0.197 Sum_probs=114.3
Q ss_pred HHHHHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh
Q 020476 7 EILLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 84 (325)
Q Consensus 7 ~~~~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~ 84 (325)
..++......-+.+|..+|.||||-.|+.+++.+++++ -+|+++.|++........... ...+|+..-+++....
T Consensus 5 ~alsklrEDf~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~at~k~v~---q~~vDf~Kl~~~a~~~ 81 (238)
T KOG4039|consen 5 EALSKLREDFRMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPATDKVVA---QVEVDFSKLSQLATNE 81 (238)
T ss_pred hhhhHHHHHHhhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCccccceee---eEEechHHHHHHHhhh
Confidence 45566666677778899999999999999999999997 389999998643322222111 1223444444555566
Q ss_pred CCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
+++|+.|.|-|-.... ...+-.+.+.-.....+.+++++ .+++.|+++||.++ - +.+.+
T Consensus 82 qg~dV~FcaLgTTRgk----aGadgfykvDhDyvl~~A~~AKe--~Gck~fvLvSS~GA--d-------------~sSrF 140 (238)
T KOG4039|consen 82 QGPDVLFCALGTTRGK----AGADGFYKVDHDYVLQLAQAAKE--KGCKTFVLVSSAGA--D-------------PSSRF 140 (238)
T ss_pred cCCceEEEeecccccc----cccCceEeechHHHHHHHHHHHh--CCCeEEEEEeccCC--C-------------cccce
Confidence 7999999998753221 11334555666677788999999 89999999999887 1 12223
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCC
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 197 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~ 197 (325)
+-|.+.|.+.....-+ --.++|+|||.+.|..
T Consensus 141 lY~k~KGEvE~~v~eL~-F~~~~i~RPG~ll~~R 173 (238)
T KOG4039|consen 141 LYMKMKGEVERDVIELD-FKHIIILRPGPLLGER 173 (238)
T ss_pred eeeeccchhhhhhhhcc-ccEEEEecCcceeccc
Confidence 4445566665554443 2378999999999975
|
|
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.48 E-value=1.2e-12 Score=113.46 Aligned_cols=207 Identities=22% Similarity=0.167 Sum_probs=122.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc---cCceeec-CCchhHhhhC----CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF---FPGVMIA-EEPQWRDCIQ----GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~-d~~~~~~~~~----~~d~v 90 (325)
.+++|+|+||||.+|+.+++.|+++|+.|.++.|+..+............ ....+.. ..+.+..+.. ...++
T Consensus 78 ~~~~VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~~~~d~~~~~v~~~~~~~~d~~~~~~~~~~~~~~~v 157 (411)
T KOG1203|consen 78 KPTTVLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGVFFVDLGLQNVEADVVTAIDILKKLVEAVPKGVVIV 157 (411)
T ss_pred CCCeEEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcccccccccceeeeccccccchhhhhhhhccccceeE
Confidence 45689999999999999999999999999999999887665543100000 0111111 2333333332 34577
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc--hHHHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND--YLAEV 168 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~--y~~k~ 168 (325)
+-|++-.... ++...-+.+...+++|++++|+. .+++|++++|+.+.. ... .++... .....
T Consensus 158 ~~~~ggrp~~----ed~~~p~~VD~~g~knlvdA~~~--aGvk~~vlv~si~~~--~~~--------~~~~~~~~~~~~~ 221 (411)
T KOG1203|consen 158 IKGAGGRPEE----EDIVTPEKVDYEGTKNLVDACKK--AGVKRVVLVGSIGGT--KFN--------QPPNILLLNGLVL 221 (411)
T ss_pred EecccCCCCc----ccCCCcceecHHHHHHHHHHHHH--hCCceEEEEEeecCc--ccC--------CCchhhhhhhhhh
Confidence 7776642111 11122334668899999999999 899999999887651 111 111111 11222
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
..+...+.+..+.|++++|+||+...-.......... .........+..--.+.-.|+|+..+.++.++....
T Consensus 222 ~~k~~~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~ 294 (411)
T KOG1203|consen 222 KAKLKAEKFLQDSGLPYTIIRPGGLEQDTGGQREVVV-----DDEKELLTVDGGAYSISRLDVAELVAKALLNEAATF 294 (411)
T ss_pred HHHHhHHHHHHhcCCCcEEEeccccccCCCCcceecc-----cCccccccccccceeeehhhHHHHHHHHHhhhhhcc
Confidence 3334445555568999999999987764322111110 000011111111135777899999999988776333
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.44 E-value=7.1e-12 Score=103.07 Aligned_cols=196 Identities=14% Similarity=0.094 Sum_probs=133.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...||||||++.+|+.++.+++++|..+.+.+.+.....+..+... ....-.+|+.+.+++.+..+ ++|+
T Consensus 38 g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V~I 117 (300)
T KOG1201|consen 38 GEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDVDI 117 (300)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCceE
Confidence 4589999999999999999999999999999988765433221110 12234689998887765543 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+||+||.... .+.+.+..+..+++|+.+ +++++..+.+ .+.+++|-++|.... .|. +...
T Consensus 118 LVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~--~~~GHIV~IaS~aG~-~g~----------~gl~ 184 (300)
T KOG1201|consen 118 LVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE--NNNGHIVTIASVAGL-FGP----------AGLA 184 (300)
T ss_pred EEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh--cCCceEEEehhhhcc-cCC----------ccch
Confidence 9999998754 344566677788999987 5556666776 677899999998652 221 2234
Q ss_pred ch-HHHHHHHHHHHHHh-----h-cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALK-----V-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~-----~-~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
+| .+|.......+.+. . ..+++.+.+.|+.+-... . .+ . ..-....+.+..+.+|+.+
T Consensus 185 ~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm-------f------~~-~-~~~~~l~P~L~p~~va~~I 249 (300)
T KOG1201|consen 185 DYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM-------F------DG-A-TPFPTLAPLLEPEYVAKRI 249 (300)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc-------c------CC-C-CCCccccCCCCHHHHHHHH
Confidence 56 56654432222222 1 237999999999776221 0 11 0 0112245688999999999
Q ss_pred HHHHcCCC
Q 020476 236 YEALSNPS 243 (325)
Q Consensus 236 ~~~~~~~~ 243 (325)
+.++..++
T Consensus 250 v~ai~~n~ 257 (300)
T KOG1201|consen 250 VEAILTNQ 257 (300)
T ss_pred HHHHHcCC
Confidence 99998875
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.41 E-value=5.5e-11 Score=101.75 Aligned_cols=218 Identities=12% Similarity=0.032 Sum_probs=130.5
Q ss_pred hcCCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCCCcccccC--------------CCC---CccccCceee--cC
Q 020476 18 ASQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF--------------PGK---KTRFFPGVMI--AE 76 (325)
Q Consensus 18 ~~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--------------~~~---~~~~~~~~d~--~d 76 (325)
...++++|||| +.-||.++++.|++.|.+|++ .|..+...... ... .......+|+ .+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 34578999999 799999999999999999988 55422110000 000 0011334566 32
Q ss_pred Cc------------------hhHhhhC-------CCCEEEECCCCCC-----CCCCChhhHHHHHHHhhHHHHHHHHHHh
Q 020476 77 EP------------------QWRDCIQ-------GSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLIN 126 (325)
Q Consensus 77 ~~------------------~~~~~~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~ 126 (325)
++ ++.++++ ++|++|||||... ..+.+.+.+...+++|+.+...+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 22 4444432 5899999996421 1345567888999999999888877665
Q ss_pred cCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC-Cch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCCc
Q 020476 127 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGA 200 (325)
Q Consensus 127 ~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~~ 200 (325)
.......++|++||... ... .+.. ..| .+|...+.....+..+ .++++..|-||.+-.+-...
T Consensus 166 p~m~~~G~II~isS~a~--~~~---------~p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~ 234 (303)
T PLN02730 166 PIMNPGGASISLTYIAS--ERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKA 234 (303)
T ss_pred HHHhcCCEEEEEechhh--cCC---------CCCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhc
Confidence 43112268999998754 110 1112 247 6777666555554442 47999999999887653211
Q ss_pred ccchHHHHHH-HcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 201 LAKMIPLFMM-FAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
....-..... ....|+ ..+...+|++.+++.++.... ..| ++.+.++
T Consensus 235 ~~~~~~~~~~~~~~~pl------~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 235 IGFIDDMIEYSYANAPL------QKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred ccccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 1000001111 111121 124678999999999997543 334 5555555
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.1e-12 Score=103.79 Aligned_cols=164 Identities=9% Similarity=-0.046 Sum_probs=107.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh-------C-C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------Q-G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~-------~-~ 86 (325)
..++++||||++-||.+++++|+++|++|+++.|+.++.+.... .........+|+.|++++.+++ . +
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 34689999999999999999999999999999998765432211 1111113346888888776554 2 6
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|++||+||.... .+.+.+.....++.|+.++..+++ .+++. ...+.+|++||... +
T Consensus 84 iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~-~~~g~Iv~isS~~~--~------------ 148 (227)
T PRK08862 84 PDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKR-NKKGVIVNVISHDD--H------------ 148 (227)
T ss_pred CCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCceEEEEecCCC--C------------
Confidence 8999999974311 222334455566778777655544 44331 22468999998543 2
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCC
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKD 197 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~ 197 (325)
+....| .+|............ ..++++..+.||.+-.+.
T Consensus 149 ~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~ 191 (227)
T PRK08862 149 QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANG 191 (227)
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCC
Confidence 123446 566655554444433 358999999999887763
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.40 E-value=3.4e-12 Score=110.42 Aligned_cols=215 Identities=14% Similarity=0.110 Sum_probs=127.2
Q ss_pred EEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 24 SVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 24 lI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
+||||++.||.+++++|+++| ++|++..|+.++....... ........+|+.|.+++.++++ ++|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 599999999999999999999 9999999976543221110 1111134679988888766553 589999
Q ss_pred ECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCC--CCCEEEEeeeeeeeecCCC-C--ce-----
Q 020476 92 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEG--VRPSVLVSATALGYYGTSE-T--EV----- 153 (325)
Q Consensus 92 ~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~--~~~~v~~Ss~~v~~~g~~~-~--~~----- 153 (325)
||||.... ...+.+.....+++|+.++..+.++ +++ .+ .+++|++||... +-... . .+
T Consensus 81 nnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~--~~~~~g~IV~vsS~~~--~~~~~~~~~~~~~~~~ 156 (308)
T PLN00015 81 CNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKK--SDYPSKRLIIVGSITG--NTNTLAGNVPPKANLG 156 (308)
T ss_pred ECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCCCEEEEEecccc--ccccccccCCCccchh
Confidence 99997422 2234567788999999996666544 444 33 468999999764 21000 0 00
Q ss_pred -----------------ecCC-CCCCCch-HHHHHHHHHHHHHhh----cCCceEEEEEeceEEcCCC-CcccchHHHH-
Q 020476 154 -----------------FDES-SPSGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDG-GALAKMIPLF- 208 (325)
Q Consensus 154 -----------------~~e~-~~~~~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~i~g~~~-~~~~~~~~~~- 208 (325)
+.+. ......| .+|.........+.. ..|+.++.+.||+|...+. ..........
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~~~~~~~~~~ 236 (308)
T PLN00015 157 DLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLF 236 (308)
T ss_pred hhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCccccccccHHHHHHH
Confidence 0001 0122346 667654443232222 2489999999999964321 1110011000
Q ss_pred HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCceE
Q 020476 209 MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVI 248 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~ 248 (325)
......+. ..+...++.|+.++.++.... ..|.|
T Consensus 237 ~~~~~~~~------~~~~~pe~~a~~~~~l~~~~~~~~~G~~ 272 (308)
T PLN00015 237 PPFQKYIT------KGYVSEEEAGKRLAQVVSDPSLTKSGVY 272 (308)
T ss_pred HHHHHHHh------cccccHHHhhhhhhhhccccccCCCccc
Confidence 00000000 124678999999998887543 34544
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.37 E-value=3.7e-12 Score=107.32 Aligned_cols=201 Identities=13% Similarity=0.052 Sum_probs=126.5
Q ss_pred eEEEECCCchHHHHHHHHHHh----CCCeEEEEecCCCcccccCC------CCCccccCceeecCCchhHhhhCC-----
Q 020476 22 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQG----- 86 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~d~~~~~~~~~~----- 86 (325)
.++||||+|.||.+++++|++ .|++|+++.|+.+....... ......+..+|+.|.+++.++++.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~~ 81 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALRELP 81 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhcc
Confidence 589999999999999999997 69999999998654332211 011112346788888877765531
Q ss_pred ------CCEEEECCCCCCCC----C--CChhhHHHHHHHhhHHHHHHHHHHhcCC--C-C-CCCEEEEeeeeeeeecCCC
Q 020476 87 ------STAVVNLAGTPIGT----R--WSSEIKKEIKESRIRVTSKVVDLINESP--E-G-VRPSVLVSATALGYYGTSE 150 (325)
Q Consensus 87 ------~d~vi~~a~~~~~~----~--~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~-~~~~v~~Ss~~v~~~g~~~ 150 (325)
.|+||||||..... . ...+.....+++|+.++..+.+.+.... . + .+++|++||... +..
T Consensus 82 g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~~~--~~~-- 157 (256)
T TIGR01500 82 RPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSLCA--IQP-- 157 (256)
T ss_pred ccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCHHh--CCC--
Confidence 26999999964221 1 1245677899999999777666554321 1 1 357999998765 221
Q ss_pred CceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc------cchHHHHHHHcCCCCCCCc
Q 020476 151 TEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQ 220 (325)
Q Consensus 151 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~ 220 (325)
.+....| .+|...+.....+..+ .++.+..+.||++-.+..... ......+ ....+.
T Consensus 158 -------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~~~---- 224 (256)
T TIGR01500 158 -------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGL--QELKAK---- 224 (256)
T ss_pred -------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHH--HHHHhc----
Confidence 1223457 6777666665555443 479999999998865421000 0000000 000011
Q ss_pred ceeeeccHHHHHHHHHHHHcC
Q 020476 221 QWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~ 241 (325)
..+...+|+|.+++.++++
T Consensus 225 --~~~~~p~eva~~~~~l~~~ 243 (256)
T TIGR01500 225 --GKLVDPKVSAQKLLSLLEK 243 (256)
T ss_pred --CCCCCHHHHHHHHHHHHhc
Confidence 1267889999999999964
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.3e-11 Score=106.33 Aligned_cols=210 Identities=15% Similarity=0.020 Sum_probs=126.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc----------ccc----CCCCCccccCceeecCCchhHhhhC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA----------ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----------~~~----~~~~~~~~~~~~d~~d~~~~~~~~~ 85 (325)
.++++||||++.||.+++++|++.|++|++++|+.... ... ...........+|+.|++++.++++
T Consensus 8 ~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~ 87 (305)
T PRK08303 8 GKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALVE 87 (305)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 46899999999999999999999999999999974321 110 0001111234689999888876653
Q ss_pred -------CCCEEEECC-CCCC-----C--CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecC
Q 020476 86 -------GSTAVVNLA-GTPI-----G--TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGT 148 (325)
Q Consensus 86 -------~~d~vi~~a-~~~~-----~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~ 148 (325)
++|++|||| |... . .+...+.....+++|+.+...+++++.... .+..++|++||.... ++.
T Consensus 88 ~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g~IV~isS~~~~-~~~ 166 (305)
T PRK08303 88 RIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGGLVVEITDGTAE-YNA 166 (305)
T ss_pred HHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCcEEEEECCcccc-ccC
Confidence 589999999 6310 1 122345566778889888777665554321 334689999986431 211
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-CcccchHHHH-HHHcCCCCCCCcce
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAKMIPLF-MMFAGGPLGSGQQW 222 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-~~~~~~~~~~-~~~~~~~~~~~~~~ 222 (325)
. ..+....| .+|.........+..+ .|+++..|.||.+-.+.. .....--..+ ......|. .
T Consensus 167 ~-------~~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~p~-----~ 234 (305)
T PRK08303 167 T-------HYRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALAKEPH-----F 234 (305)
T ss_pred c-------CCCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhccccc-----c
Confidence 0 01123457 6676665555444443 479999999998865420 0000000000 00000010 1
Q ss_pred eeeccHHHHHHHHHHHHcCC
Q 020476 223 FSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~ 242 (325)
.-+...+|++.+++.++.++
T Consensus 235 ~~~~~peevA~~v~fL~s~~ 254 (305)
T PRK08303 235 AISETPRYVGRAVAALAADP 254 (305)
T ss_pred ccCCCHHHHHHHHHHHHcCc
Confidence 12347899999999999765
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.9e-11 Score=101.91 Aligned_cols=199 Identities=12% Similarity=0.035 Sum_probs=126.8
Q ss_pred HHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC----CCCEEEECCCCCCCCCCChhhHHHHH
Q 020476 36 LVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAGTPIGTRWSSEIKKEIK 111 (325)
Q Consensus 36 l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d~vi~~a~~~~~~~~~~~~~~~~~ 111 (325)
++++|+++|++|++++|+.++... ..+..+|+.|.+++.++++ ++|+|||+||... ....+..+
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~~-------~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~-----~~~~~~~~ 68 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMTL-------DGFIQADLGDPASIDAAVAALPGRIDALFNIAGVPG-----TAPVELVA 68 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhhh-------hHhhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCC-----CCCHHHhh
Confidence 468899999999999998765321 1145689999998887775 5899999999642 23467889
Q ss_pred HHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecC------------------CCCCCCch-HHHHHHHH
Q 020476 112 ESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE------------------SSPSGNDY-LAEVCREW 172 (325)
Q Consensus 112 ~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e------------------~~~~~~~y-~~k~~~~~ 172 (325)
++|+.++..+++++.......+++|++||... ++.....+..+ ..+....| .+|...+.
T Consensus 69 ~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~ 146 (241)
T PRK12428 69 RVNFLGLRHLTEALLPRMAPGGAIVNVASLAG--AEWPQRLELHKALAATASFDEGAAWLAAHPVALATGYQLSKEALIL 146 (241)
T ss_pred hhchHHHHHHHHHHHHhccCCcEEEEeCcHHh--hccccchHHHHhhhccchHHHHHHhhhccCCCcccHHHHHHHHHHH
Confidence 99999999999988653223368999999987 65322111111 11233567 77776665
Q ss_pred HHHHHh----hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc
Q 020476 173 EGTALK----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG 246 (325)
Q Consensus 173 ~~~~~~----~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~ 246 (325)
....+. ...|++++.++||.+.++........... ...... . .....+...+|+|+++..++..+. ..|
T Consensus 147 ~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~-~~~~~~-~---~~~~~~~~pe~va~~~~~l~s~~~~~~~G 221 (241)
T PRK12428 147 WTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQ-ERVDSD-A---KRMGRPATADEQAAVLVFLCSDAARWING 221 (241)
T ss_pred HHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhh-Hhhhhc-c---cccCCCCCHHHHHHHHHHHcChhhcCccC
Confidence 555444 33589999999999988742211100000 000000 0 011225678999999999886532 334
Q ss_pred -eEEeeCC
Q 020476 247 -VINGTAP 253 (325)
Q Consensus 247 -~~~~~~~ 253 (325)
...+.++
T Consensus 222 ~~i~vdgg 229 (241)
T PRK12428 222 VNLPVDGG 229 (241)
T ss_pred cEEEecCc
Confidence 4444444
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.34 E-value=1e-10 Score=89.56 Aligned_cols=219 Identities=16% Similarity=0.143 Sum_probs=135.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.+..+||||+..||+++++.|.+.|++|.+.+++........... ..+....+|+.+.++++..++ .+++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psv 93 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSV 93 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcE
Confidence 357999999999999999999999999999998876543322211 111233589988877665442 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC----CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+++|||+... .+...+.++....+|+.++....+++.+. ..+..++|.+||.--. .|......+.....-.-
T Consensus 94 lVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGk-iGN~GQtnYAAsK~GvI 172 (256)
T KOG1200|consen 94 LVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGK-IGNFGQTNYAASKGGVI 172 (256)
T ss_pred EEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcc-cccccchhhhhhcCcee
Confidence 9999998644 56678899999999999876665554432 1222379999986431 23211111111111011
Q ss_pred chHHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 163 DYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 163 ~y~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
. .+|.+..... ..++++..+.||+|-.|-.... ..+.. ......|.+ .+-..+|+|..+..+..+
T Consensus 173 g-ftktaArEla-----~knIrvN~VlPGFI~tpMT~~mp~~v~~--ki~~~iPmg------r~G~~EevA~~V~fLAS~ 238 (256)
T KOG1200|consen 173 G-FTKTAARELA-----RKNIRVNVVLPGFIATPMTEAMPPKVLD--KILGMIPMG------RLGEAEEVANLVLFLASD 238 (256)
T ss_pred e-eeHHHHHHHh-----hcCceEeEeccccccChhhhhcCHHHHH--HHHccCCcc------ccCCHHHHHHHHHHHhcc
Confidence 1 1222111111 1589999999999998853211 11211 222233332 255678999999988865
Q ss_pred CC---CCceEEeeCC
Q 020476 242 PS---YRGVINGTAP 253 (325)
Q Consensus 242 ~~---~~~~~~~~~~ 253 (325)
.. .+..+.+.+|
T Consensus 239 ~ssYiTG~t~evtGG 253 (256)
T KOG1200|consen 239 ASSYITGTTLEVTGG 253 (256)
T ss_pred ccccccceeEEEecc
Confidence 43 2336776665
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.31 E-value=5.7e-12 Score=98.95 Aligned_cols=146 Identities=21% Similarity=0.155 Sum_probs=101.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecC--CCccccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS--RSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~--~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
|+++||||+|-||..+++.|+++| +.|+++.|+ .+..... ...........+|+.+.+++.++++ .
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 479999999999999999999995 588888888 2222221 1111222244588888887776654 6
Q ss_pred CCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
.|++|||||..... +...+.....+++|+.+...+.+++.. .+.+++|++||.... .| .+....
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~g~iv~~sS~~~~-~~----------~~~~~~ 147 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP--QGGGKIVNISSIAGV-RG----------SPGMSA 147 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH--HTTEEEEEEEEGGGT-SS----------STTBHH
T ss_pred ccccccccccccccccccccchhhhhccccccceeeeeeehhee--ccccceEEecchhhc-cC----------CCCChh
Confidence 89999999986432 223466778899999999999888887 567899999998751 11 123345
Q ss_pred h-HHHHHHHHHHHHHhh
Q 020476 164 Y-LAEVCREWEGTALKV 179 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~ 179 (325)
| .+|...+.....+..
T Consensus 148 Y~askaal~~~~~~la~ 164 (167)
T PF00106_consen 148 YSASKAALRGLTQSLAA 164 (167)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 6 667666665555443
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.27 E-value=6.2e-11 Score=99.52 Aligned_cols=164 Identities=17% Similarity=0.136 Sum_probs=111.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--ccc---CC-CC-CccccCceeecC-CchhHhhhC----
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELI---FP-GK-KTRFFPGVMIAE-EPQWRDCIQ---- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~---~~-~~-~~~~~~~~d~~d-~~~~~~~~~---- 85 (325)
..+++|+||||++.||..+++.|+++|+.|+++.|+.... ... .. .. .......+|+.+ .+.+..+++
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~ 82 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEE 82 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHH
Confidence 3467899999999999999999999999999888876531 111 11 00 011234578887 666655443
Q ss_pred ---CCCEEEECCCCCC----CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 ---GSTAVVNLAGTPI----GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ---~~d~vi~~a~~~~----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++||+||... ..+...+..+..+++|+.+...+.+++...... +++|.+||... . ..
T Consensus 83 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~-~~Iv~isS~~~--~-~~--------- 149 (251)
T COG1028 83 EFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMKK-QRIVNISSVAG--L-GG--------- 149 (251)
T ss_pred HcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhhh-CeEEEECCchh--c-CC---------
Confidence 4899999999752 234445678889999999888887755442111 18999998865 2 11
Q ss_pred CC-CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEE
Q 020476 159 PS-GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVL 194 (325)
Q Consensus 159 ~~-~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~ 194 (325)
+. ...| .+|.........+..+ .|+.+..+.||.+-
T Consensus 150 ~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 150 PPGQAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYID 190 (251)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCC
Confidence 11 3567 6777666555555533 58999999999544
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.27 E-value=9.1e-11 Score=90.74 Aligned_cols=165 Identities=14% Similarity=0.115 Sum_probs=108.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..-+||||||+..||..++++|++.|.+|+...|+.............-....+|+-|.++.++++. ..+++|
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 3448999999999999999999999999999999987654443322111134588888886665543 579999
Q ss_pred ECCCCCCCCCCC-----hhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 92 NLAGTPIGTRWS-----SEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 92 ~~a~~~~~~~~~-----~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
||||+....++. .+...+-..+|..++..+..+ +.+ ....-+|.+||.-. +-... ..|
T Consensus 84 NNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~--q~~a~IInVSSGLa--fvPm~---------~~P 150 (245)
T COG3967 84 NNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLR--QPEATIINVSSGLA--FVPMA---------STP 150 (245)
T ss_pred ecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHh--CCCceEEEeccccc--cCccc---------ccc
Confidence 999986443333 222345567888876666554 444 44557889998755 32111 133
Q ss_pred ch-HHHHHHHHHHHHHh---hcCCceEEEEEeceEEcC
Q 020476 163 DY-LAEVCREWEGTALK---VNKDVRLALIRIGIVLGK 196 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~---~~~~~~~~ilRp~~i~g~ 196 (325)
-| .+|..........+ +..++.++-+-|+.|-.+
T Consensus 151 vYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 151 VYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred cchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 45 44443332222222 234789999999988875
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.6e-11 Score=101.45 Aligned_cols=219 Identities=16% Similarity=0.064 Sum_probs=134.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCC--CccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGK--KTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~--~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++|||||+.||.+++++|+.+|.+|+...|+.+..... .... ....+..+|+.+.+++.+..+
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 346899999999999999999999999999999997543222 1111 111135688888887776543
Q ss_pred CCCEEEECCCCCCCCC-CChhhHHHHHHHhhHHHH----HHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTPIGTR-WSSEIKKEIKESRIRVTS----KVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~~-~~~~~~~~~~~~nv~~~~----~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
..|++|++||+..... ...+..+..+.+|..|.. .|++.++. ....|+|++||..- .........-.|....
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~--s~~~RIV~vsS~~~-~~~~~~~~l~~~~~~~ 190 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKR--SAPSRIVNVSSILG-GGKIDLKDLSGEKAKL 190 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhh--CCCCCEEEEcCccc-cCccchhhccchhccC
Confidence 5799999999874433 344567888899998854 45566666 33379999999753 0111111111122111
Q ss_pred CC---ch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 161 GN---DY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 ~~---~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
.. .| .+|.........+.++. |+.+..+-||.+...+-.....+...+......++ +-..++-|+.
T Consensus 191 ~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r~~~~~~~l~~~l~~~~--------~ks~~~ga~t 262 (314)
T KOG1208|consen 191 YSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSRVNLLLRLLAKKLSWPL--------TKSPEQGAAT 262 (314)
T ss_pred ccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceecchHHHHHHHHHHHHHh--------ccCHHHHhhh
Confidence 11 25 56655443333333322 79999999999988853222222222211111111 1256777888
Q ss_pred HHHHHcCCC---CCceE
Q 020476 235 IYEALSNPS---YRGVI 248 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~ 248 (325)
.+.++.+++ ..|.|
T Consensus 263 ~~~~a~~p~~~~~sg~y 279 (314)
T KOG1208|consen 263 TCYAALSPELEGVSGKY 279 (314)
T ss_pred eehhccCccccCccccc
Confidence 888887775 44566
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=2e-09 Score=92.14 Aligned_cols=218 Identities=10% Similarity=-0.015 Sum_probs=126.9
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCC---------Ccccc--cC--CCCC-----ccccCceeecCCc
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR---------SKAEL--IF--PGKK-----TRFFPGVMIAEEP 78 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~--~~--~~~~-----~~~~~~~d~~d~~ 78 (325)
..++++||||+ .-||+++++.|+++|.+|++.+|.+ +.... .. .... .......|+.+.+
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~~~ 86 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDTPE 86 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCCCE
Confidence 45689999995 8999999999999999999876431 11100 00 0000 0000112333332
Q ss_pred ------------------hhHhhh-------CCCCEEEECCCCCC-----CCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 79 ------------------QWRDCI-------QGSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 79 ------------------~~~~~~-------~~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
++.+++ .++|++|||||... ..+.+.+.+...+++|+.+...+.+++...
T Consensus 87 ~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~ 166 (299)
T PRK06300 87 DVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPI 166 (299)
T ss_pred EeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 233332 36899999997531 134456678889999999988888877653
Q ss_pred CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC-ch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCCccc
Q 020476 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALA 202 (325)
Q Consensus 129 ~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~-~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~~~~ 202 (325)
....+++|.+||.... .+ .+... .| .+|.........+..+ .|+++..|.||.+..+......
T Consensus 167 m~~~G~ii~iss~~~~-~~----------~p~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~ 235 (299)
T PRK06300 167 MNPGGSTISLTYLASM-RA----------VPGYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIG 235 (299)
T ss_pred hhcCCeEEEEeehhhc-Cc----------CCCccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhccc
Confidence 2233578888876541 11 11122 47 6777666555444432 3899999999988765321110
Q ss_pred chHHHHH-HHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 203 KMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 203 ~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
..-.... .....+. ..+...+|+++++..++.... ..| ++.+.++
T Consensus 236 ~~~~~~~~~~~~~p~------~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 236 FIERMVDYYQDWAPL------PEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred ccHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 0001111 1111121 125678999999999987532 334 6666555
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=7.4e-10 Score=93.15 Aligned_cols=223 Identities=15% Similarity=0.062 Sum_probs=136.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-------CCccccCceeecCCchhHhhh-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-------KKTRFFPGVMIAEEPQWRDCI------- 84 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-------~~~~~~~~~d~~d~~~~~~~~------- 84 (325)
..|.++|||++.-||++++++|++.|.+|+..+|+.+........ ........+|+.+.++..+++
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 456899999999999999999999999999999987753222110 011113457887776555443
Q ss_pred -CCCCEEEECCCCCCC----CCCChhhHHHHHHHhhHH-HHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 85 -QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRV-TSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 85 -~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~-~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
.+.|++|++||.... .+.+++.++..+++|+.+ ...+..++..+. .+...++++||... +...
T Consensus 87 ~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~--~~~~------- 157 (270)
T KOG0725|consen 87 FGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAG--VGPG------- 157 (270)
T ss_pred CCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEecccc--ccCC-------
Confidence 268999999997542 456677889999999994 555555554331 34556777777754 2211
Q ss_pred CCCCC-Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCC-cc-cchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 157 SSPSG-NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGG-AL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 157 ~~~~~-~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+.. ..| .+|............ +.|+++..+-||.|..+... .. ......+... .........-.+...+
T Consensus 158 --~~~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~--~~~~~~~p~gr~g~~~ 233 (270)
T KOG0725|consen 158 --PGSGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEA--TDSKGAVPLGRVGTPE 233 (270)
T ss_pred --CCCcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhh--hccccccccCCccCHH
Confidence 112 456 566555544444433 25899999999999887510 00 0001111110 0000011122367889
Q ss_pred HHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 230 DIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
|++.++..++.... ..| .+.+.++.
T Consensus 234 eva~~~~fla~~~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 234 EVAEAAAFLASDDASYITGQTIIVDGGF 261 (270)
T ss_pred HHHHhHHhhcCcccccccCCEEEEeCCE
Confidence 99999988887643 233 55455543
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.6e-12 Score=103.79 Aligned_cols=209 Identities=16% Similarity=0.098 Sum_probs=132.4
Q ss_pred CCC--chHHHHHHHHHHhCCCeEEEEecCCCcc----cccCCCCCccccCceeecCCchhHhhh--------CCCCEEEE
Q 020476 27 GAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA----ELIFPGKKTRFFPGVMIAEEPQWRDCI--------QGSTAVVN 92 (325)
Q Consensus 27 Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~~~~d~~d~~~~~~~~--------~~~d~vi~ 92 (325)
|++ +-||.++++.|+++|++|++.+|+.++. ..+..... .....+|+.+++++.+++ .++|++||
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~-~~~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYG-AEVIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTT-SEEEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcC-CceEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 566 9999999999999999999999988752 22211111 113568888888777663 46899999
Q ss_pred CCCCCCC----C---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 93 LAGTPIG----T---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 93 ~a~~~~~----~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
+++.... . +...+.+...++.|+.+...+++++.......+++|++||... ... .+....|
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~--~~~---------~~~~~~y~ 148 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA--QRP---------MPGYSAYS 148 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG--TSB---------STTTHHHH
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh--ccc---------CccchhhH
Confidence 9987543 1 1234567788899999888887776432123368999998764 211 1223356
Q ss_pred HHHHHHHHHHHHHhh---c-CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 165 LAEVCREWEGTALKV---N-KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~-~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
.+|...+.....+.. . .|+++..|.||.+..+........-... ......|++ .+...+|+|.++..++
T Consensus 149 ~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~------r~~~~~evA~~v~fL~ 222 (241)
T PF13561_consen 149 ASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLG------RLGTPEEVANAVLFLA 222 (241)
T ss_dssp HHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTS------SHBEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccC------CCcCHHHHHHHHHHHh
Confidence 556555444433333 2 5899999999988865311110000111 112222332 2578999999999999
Q ss_pred cCCC--CCc-eEEeeCC
Q 020476 240 SNPS--YRG-VINGTAP 253 (325)
Q Consensus 240 ~~~~--~~~-~~~~~~~ 253 (325)
.+.. ..| ++.+.+|
T Consensus 223 s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 223 SDAASYITGQVIPVDGG 239 (241)
T ss_dssp SGGGTTGTSEEEEESTT
T ss_pred CccccCccCCeEEECCC
Confidence 8652 344 6666655
|
... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.6e-10 Score=90.53 Aligned_cols=158 Identities=15% Similarity=0.153 Sum_probs=100.8
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCC-ccc------ccCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS-KAE------LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~-~~~------~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
+++||||+|.||..+++.|++++. +|+++.|+.. ... .+........+..+|+.|++++.+++. .
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~~ 81 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFGP 81 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS-
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccCC
Confidence 689999999999999999999974 8999999832 111 111122223355789999999888764 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
++.|||+|+.... .+.+.+.....+..-+.++.+|.+++.. .....+|++||.... +|.. -...
T Consensus 82 i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~--~~l~~~i~~SSis~~-~G~~----------gq~~ 148 (181)
T PF08659_consen 82 IDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN--RPLDFFILFSSISSL-LGGP----------GQSA 148 (181)
T ss_dssp EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT--TTTSEEEEEEEHHHH-TT-T----------TBHH
T ss_pred cceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc--CCCCeEEEECChhHh-ccCc----------chHh
Confidence 5899999998643 3344556677788889999999999988 688889999998752 4522 2345
Q ss_pred h-HHHHHHHHHHHHHhhcCCceEEEEEeceE
Q 020476 164 Y-LAEVCREWEGTALKVNKDVRLALIRIGIV 193 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i 193 (325)
| ......+........ .+.++..+.-+.+
T Consensus 149 YaaAN~~lda~a~~~~~-~g~~~~sI~wg~W 178 (181)
T PF08659_consen 149 YAAANAFLDALARQRRS-RGLPAVSINWGAW 178 (181)
T ss_dssp HHHHHHHHHHHHHHHHH-TTSEEEEEEE-EB
T ss_pred HHHHHHHHHHHHHHHHh-CCCCEEEEEcccc
Confidence 6 333334444443333 5889888876643
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.17 E-value=3.1e-09 Score=83.72 Aligned_cols=206 Identities=17% Similarity=0.211 Sum_probs=122.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEe-cCCCcccc-cCCCC---CccccCceeecCCchhHhhh---------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKAEL-IFPGK---KTRFFPGVMIAEEPQWRDCI--------- 84 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~-~~~~~---~~~~~~~~d~~d~~~~~~~~--------- 84 (325)
++.|+||||+..||-.|+++|+.. |.+++..+ |++++... +.... .......+|+...+++.+.+
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~ 82 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGS 82 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhccc
Confidence 457999999999999999999976 56665555 44665322 11110 00112356777666555443
Q ss_pred CCCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHH----HHHHHHhcCCCCCC-----------CEEEEeeeeeee
Q 020476 85 QGSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTS----KVVDLINESPEGVR-----------PSVLVSATALGY 145 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~----~ll~~~~~~~~~~~-----------~~v~~Ss~~v~~ 145 (325)
++.|++|++||.... ..-..+.+...+++|+.++. .++..+++ +..+ .+|++||.+..
T Consensus 83 ~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkk--aas~~~gd~~s~~raaIinisS~~~s- 159 (249)
T KOG1611|consen 83 DGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKK--AASKVSGDGLSVSRAAIINISSSAGS- 159 (249)
T ss_pred CCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHH--HhhcccCCcccccceeEEEeeccccc-
Confidence 367999999998533 22234456778889987744 44444454 3333 68889988763
Q ss_pred ecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcc
Q 020476 146 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ 221 (325)
Q Consensus 146 ~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+... ......| .+|.+.......... +.++-++-+.||||-..-++.
T Consensus 160 ~~~~~-------~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMgg~--------------------- 211 (249)
T KOG1611|consen 160 IGGFR-------PGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMGGK--------------------- 211 (249)
T ss_pred cCCCC-------CcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCCCC---------------------
Confidence 11110 0123356 667655444433333 347888899999998664321
Q ss_pred eeeeccHHHHHHHHHHHHcC--CCCCceEEeeCCCCCC
Q 020476 222 WFSWIHLDDIVNLIYEALSN--PSYRGVINGTAPNPVR 257 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~--~~~~~~~~~~~~~~~s 257 (325)
-..+.+++-+..++..+.+ ++.+|-|.=-++.+++
T Consensus 212 -~a~ltveeSts~l~~~i~kL~~~hnG~ffn~dlt~ip 248 (249)
T KOG1611|consen 212 -KAALTVEESTSKLLASINKLKNEHNGGFFNRDGTPIP 248 (249)
T ss_pred -CcccchhhhHHHHHHHHHhcCcccCcceEccCCCcCC
Confidence 1256777777777777754 3355544333444443
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.16 E-value=9.8e-10 Score=91.02 Aligned_cols=163 Identities=20% Similarity=0.219 Sum_probs=115.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc--ccCceeecCCchhHhhhC---------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR--FFPGVMIAEEPQWRDCIQ---------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~~~d~~d~~~~~~~~~---------~~ 87 (325)
..+-|+|||.-...|..++++|.++|+.|++-.-.++..+.+....... .....|++++++++++.+ +-
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~gL 107 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDGL 107 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhcccccc
Confidence 3456999999999999999999999999999987666554444322100 123689999998887764 45
Q ss_pred CEEEECCCCC---CCCCC-ChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTP---IGTRW-SSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~---~~~~~-~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
-.||||||+. ++.+| ..++.....++|..|+..+ +...++ ..+|+|++||.+.. . ..|
T Consensus 108 wglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~---arGRvVnvsS~~GR----~-------~~p 173 (322)
T KOG1610|consen 108 WGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRR---ARGRVVNVSSVLGR----V-------ALP 173 (322)
T ss_pred eeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHh---ccCeEEEecccccC----c-------cCc
Confidence 6899999954 22333 3556778889998885554 555555 45799999998641 1 123
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcC
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGK 196 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~ 196 (325)
....| .+|...+......+.+ +|+++.++-|| +|-.
T Consensus 174 ~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG-~f~T 213 (322)
T KOG1610|consen 174 ALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG-FFKT 213 (322)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC-cccc
Confidence 34567 7787777666555554 59999999999 4444
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.16 E-value=2.1e-10 Score=89.14 Aligned_cols=166 Identities=14% Similarity=0.025 Sum_probs=110.4
Q ss_pred cCCeEEEECC-CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--------CCCE
Q 020476 19 SQMTVSVTGA-TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--------GSTA 89 (325)
Q Consensus 19 ~~~~ilI~Ga-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--------~~d~ 89 (325)
..++|||||. +|.||.+|+++|.+.|++|++..|+.+.-..+..... ...-.+|+.+++.+.+... +.|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~g-l~~~kLDV~~~~~V~~v~~evr~~~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFG-LKPYKLDVSKPEEVVTVSGEVRANPDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhC-CeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence 3568999875 5899999999999999999999998876444331111 0123589999988776542 4699
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
++|+||..+. .+..-+..+..+++|+-|..++.++.... ....+.+|++.|..+ |-.- |-...|
T Consensus 85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~--~vpf---------pf~~iYs 153 (289)
T KOG1209|consen 85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAG--VVPF---------PFGSIYS 153 (289)
T ss_pred EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeE--Eecc---------chhhhhh
Confidence 9999998755 33344556778899998876666665432 123468999999877 3211 223446
Q ss_pred HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcC
Q 020476 165 LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK 196 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~ 196 (325)
.+|.+.......++- .+|++++-+-+|.|-..
T Consensus 154 AsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 154 ASKAAIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred HHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 555444333333222 25888888888876654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.8e-10 Score=94.46 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=111.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCccccc--CCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~--~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.|+||+|+|++|.||+.++..|+.++ .++..+++........ ..... .....+..|+.++.+.++++|+||++|
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a~Dl~~~~~--~~~v~~~td~~~~~~~l~gaDvVVita 84 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVAADLSHIDT--PAKVTGYADGELWEKALRGADLVLICA 84 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccccchhhcCc--CceEEEecCCCchHHHhCCCCEEEECC
Confidence 45699999999999999999998655 6899999933222111 11110 011223445566577899999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCce-ecCCC-CCCCch-HHHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEV-FDESS-PSGNDY-LAEVCRE 171 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~-~~e~~-~~~~~y-~~k~~~~ 171 (325)
|.+.. ...+..+.+..|+..+.++++++++ .+.+++|+++|-.+..+....... ..... |+..-| .+.....
T Consensus 85 G~~~~---~~~tR~dll~~N~~i~~~i~~~i~~--~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~~viG~g~LDs~ 159 (321)
T PTZ00325 85 GVPRK---PGMTRDDLFNTNAPIVRDLVAAVAS--SAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPRKLFGVTTLDVV 159 (321)
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEecCcHHHHHHHHHhhhhhccCCChhheeechhHHHH
Confidence 97522 2235678889999999999999999 788999999996652111110000 01111 222223 2223344
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCC
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGG 199 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~ 199 (325)
.......+..+++..-++ +.|+|..+.
T Consensus 160 R~r~~la~~l~v~~~~V~-~~VlGeHGd 186 (321)
T PTZ00325 160 RARKFVAEALGMNPYDVN-VPVVGGHSG 186 (321)
T ss_pred HHHHHHHHHhCcChhheE-EEEEeecCC
Confidence 455555555678877887 889987543
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.5e-09 Score=89.84 Aligned_cols=204 Identities=16% Similarity=0.116 Sum_probs=129.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc------cccCceeecCCchhHhhhC-------CC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT------RFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~------~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+|+|||++..+|..++..+..+|++|+++.|+..+.......... ..+..+|+.|.+++...++ .+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~~~~ 113 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLEGPI 113 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhccCCc
Confidence 4899999999999999999999999999999998775443322111 1134477778877776664 47
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|.+|+|||.... .+.+....+...++|..++.+++.++.... .+.++++++||.... +|... .
T Consensus 114 d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~-~~i~G----------y 182 (331)
T KOG1210|consen 114 DNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAM-LGIYG----------Y 182 (331)
T ss_pred ceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhh-cCccc----------c
Confidence 999999997644 445566677788999999888876554321 123378888886652 33211 2
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|....-+.....+ +.++.++..-|+.+..|+-..-+...|..- ..+..+ .+.+..+++|++++.
T Consensus 183 saYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t----~ii~g~---ss~~~~e~~a~~~~~ 255 (331)
T KOG1210|consen 183 SAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEET----KIIEGG---SSVIKCEEMAKAIVK 255 (331)
T ss_pred cccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchhe----eeecCC---CCCcCHHHHHHHHHh
Confidence 233 334333333332222 248889988898888775211111111110 001111 245888999999988
Q ss_pred HHcCC
Q 020476 238 ALSNP 242 (325)
Q Consensus 238 ~~~~~ 242 (325)
=+.++
T Consensus 256 ~~~rg 260 (331)
T KOG1210|consen 256 GMKRG 260 (331)
T ss_pred HHhhc
Confidence 77554
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.06 E-value=3e-10 Score=85.38 Aligned_cols=207 Identities=18% Similarity=0.155 Sum_probs=133.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
.+.|++||+.-.||+.++..|.+.|.+|+++.|.+.....+...... .....+|+.+-+.+.+++- -.|.++|+||
T Consensus 7 G~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNAg 86 (245)
T KOG1207|consen 7 GVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNAG 86 (245)
T ss_pred ceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccch
Confidence 35799999999999999999999999999999998775554332110 1123567777666666664 4699999999
Q ss_pred CCCCCCC---ChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 96 TPIGTRW---SSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 96 ~~~~~~~---~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
......+ .++..+..+++|+.+..++.+...+. ..-.+.+|.+||.+. .-.-. .+.-| .+|.
T Consensus 87 vA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas--~R~~~---------nHtvYcatKa 155 (245)
T KOG1207|consen 87 VATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQAS--IRPLD---------NHTVYCATKA 155 (245)
T ss_pred hhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhc--ccccC---------CceEEeecHH
Confidence 8644333 34455566789998877776653221 022345899998775 21111 13346 5676
Q ss_pred HHHHHHHHHhhcC---CceEEEEEeceEEcCCC-CcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 169 CREWEGTALKVNK---DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 169 ~~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
+..........+. .+++..+.|..+....+ .+|..-...-.++...|+ --|..++.+++++..++.+..
T Consensus 156 ALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl------~rFaEV~eVVnA~lfLLSd~s 228 (245)
T KOG1207|consen 156 ALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPL------KRFAEVDEVVNAVLFLLSDNS 228 (245)
T ss_pred HHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCch------hhhhHHHHHHhhheeeeecCc
Confidence 6666666665554 57888889998886632 222211111111222222 238889999999999998755
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.05 E-value=2.5e-09 Score=112.77 Aligned_cols=164 Identities=15% Similarity=0.126 Sum_probs=115.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCccc----------------------------------------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAE---------------------------------------- 58 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~---------------------------------------- 58 (325)
.+++|||||+|.||..++++|+++ |.+|++++|++....
T Consensus 1997 g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~~~ 2076 (2582)
T TIGR02813 1997 DDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVRPV 2076 (2582)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccccc
Confidence 458999999999999999999988 699999999831000
Q ss_pred -----------ccCCCCCccccCceeecCCchhHhhhC------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHH
Q 020476 59 -----------LIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVT 118 (325)
Q Consensus 59 -----------~~~~~~~~~~~~~~d~~d~~~~~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~ 118 (325)
.+........+..+|+.|.+++.++++ ++|.|||+||.... .+...+.+...+++|+.++
T Consensus 2077 ~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~ 2156 (2582)
T TIGR02813 2077 LSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGL 2156 (2582)
T ss_pred chhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHH
Confidence 000001112245689999988876664 48999999997533 3345677888999999999
Q ss_pred HHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhcC-CceEEEEEeceEEcC
Q 020476 119 SKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGK 196 (325)
Q Consensus 119 ~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~i~g~ 196 (325)
.++++++.. ...+++|++||.... +|.. ....| .+|.........+..+. ++++..+.||.+-+.
T Consensus 2157 ~~Ll~al~~--~~~~~IV~~SSvag~-~G~~----------gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2157 LSLLAALNA--ENIKLLALFSSAAGF-YGNT----------GQSDYAMSNDILNKAALQLKALNPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred HHHHHHHHH--hCCCeEEEEechhhc-CCCC----------CcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECCeecCC
Confidence 999999987 456789999997652 4421 23457 55554444444434333 688999999987654
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.1e-08 Score=87.83 Aligned_cols=170 Identities=14% Similarity=0.132 Sum_probs=110.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccC--CCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF--PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~--~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..||+|+|++|.+|+.++..|..++ .++.++++++....... .... .....++.+.+++.+.++++|+|||+||
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~Dl~~~~~--~~~i~~~~~~~d~~~~l~~aDiVVitAG 95 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAADVSHINT--PAQVRGFLGDDQLGDALKGADLVIIPAG 95 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEchhhhCCc--CceEEEEeCCCCHHHHcCCCCEEEEeCC
Confidence 3599999999999999999998765 48999998772221111 1110 0112234466678888999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC--CCCCch-HHHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS--PSGNDY-LAEVCREW 172 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~--~~~~~y-~~k~~~~~ 172 (325)
.+.. ......+....|+..++++.+.+++ .+..++++++|=-+-.+...-........ |+..-| ..+...+.
T Consensus 96 ~~~~---~g~~R~dll~~N~~i~~~i~~~i~~--~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~viG~~~LDs~R 170 (323)
T PLN00106 96 VPRK---PGMTRDDLFNINAGIVKTLCEAVAK--HCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLFGVTTLDVVR 170 (323)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEEEEecchHHH
Confidence 7532 2345778889999999999999999 67788888887433100000000111112 222233 34455566
Q ss_pred HHHHHhhcCCceEEEEEeceEEcCC
Q 020476 173 EGTALKVNKDVRLALIRIGIVLGKD 197 (325)
Q Consensus 173 ~~~~~~~~~~~~~~ilRp~~i~g~~ 197 (325)
....+.+..+++..-+. +.|+|..
T Consensus 171 l~~~lA~~lgv~~~~V~-~~ViGeH 194 (323)
T PLN00106 171 ANTFVAEKKGLDPADVD-VPVVGGH 194 (323)
T ss_pred HHHHHHHHhCCChhheE-EEEEEeC
Confidence 77777777788877775 6677654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.8e-09 Score=89.00 Aligned_cols=105 Identities=11% Similarity=0.167 Sum_probs=73.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-------CeEEEEecCCCc--ccccC-CCCCcc-ccCceeecCCchhHhhhCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK--AELIF-PGKKTR-FFPGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~--~~~~~-~~~~~~-~~~~~d~~d~~~~~~~~~~~d 88 (325)
+.||+||||+|++|++++..|+..+ .+|+++++++.. ..... ...... ... .++.....+.+.++++|
T Consensus 2 ~~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~d~~~~~~-~~~~~~~~~~~~l~~aD 80 (325)
T cd01336 2 PIRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQDCAFPLL-KSVVATTDPEEAFKDVD 80 (325)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehhhcccccc-CCceecCCHHHHhCCCC
Confidence 3589999999999999999998754 589999996642 11110 000000 011 13333566778889999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+|||+||.+.. ...+..+.++.|+...+.+.+.++++
T Consensus 81 iVI~tAG~~~~---~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 81 VAILVGAMPRK---EGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred EEEEeCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999997532 23346788899999999999999883
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=3.5e-09 Score=82.75 Aligned_cols=126 Identities=13% Similarity=0.081 Sum_probs=76.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhh-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCI-------QGS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~-------~~~ 87 (325)
..+.++||||+|.||..+++.|.+.|++|++++|+.+..... ...........+|+.+.+++.+++ .++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 356899999999999999999999999999999876543211 111111113457888887776644 268
Q ss_pred CEEEECCCCCCCC-CCChhhHHHHHHHhhHH----HHHHHHHHhcC-----CCCCCCEEEEeeeeee
Q 020476 88 TAVVNLAGTPIGT-RWSSEIKKEIKESRIRV----TSKVVDLINES-----PEGVRPSVLVSATALG 144 (325)
Q Consensus 88 d~vi~~a~~~~~~-~~~~~~~~~~~~~nv~~----~~~ll~~~~~~-----~~~~~~~v~~Ss~~v~ 144 (325)
|++|||||..... .+...........|+.+ ++.+.....+. ....+||..+||.++.
T Consensus 95 DilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 95 DMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred CEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEecccccc
Confidence 9999999975321 11111111222334433 33333332221 1345678888887763
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=1.4e-09 Score=85.44 Aligned_cols=152 Identities=17% Similarity=0.186 Sum_probs=100.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
|+++|||||||+|. +++.|.++|++|++++|++........ .........+|+.|.+++.++++ .+|.+
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~l 79 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLA 79 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 68999999998876 999999999999999998655433221 01111133468889888876664 46788
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC----CEEEEeeeeeeeecCCCCceecCCCCCCCchHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR----PSVLVSATALGYYGTSETEVFDESSPSGNDYLA 166 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~----~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~ 166 (325)
|+.+- +.++.++..+|++ .+++ +++++=.+.+. ++ ...
T Consensus 80 v~~vh-------------------~~~~~~~~~~~~~--~gv~~~~~~~~h~~gs~~~-------------~~----~~~ 121 (177)
T PRK08309 80 VAWIH-------------------SSAKDALSVVCRE--LDGSSETYRLFHVLGSAAS-------------DP----RIP 121 (177)
T ss_pred EEecc-------------------ccchhhHHHHHHH--HccCCCCceEEEEeCCcCC-------------ch----hhh
Confidence 87753 4567789999999 6777 78887655430 00 000
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.+... . ....+.-+.+|++...... -|+.-+.+++.++.+++.+.
T Consensus 122 ---~~~~~---~--~~~~~~~i~lgf~~~~~~~------------------------rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 122 ---SEKIG---P--ARCSYRRVILGFVLEDTYS------------------------RWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred ---hhhhh---h--cCCceEEEEEeEEEeCCcc------------------------ccCchHHHHHHHHHHHhcCC
Confidence 00010 0 2456777778888765431 15666779999999997764
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.5e-07 Score=74.45 Aligned_cols=212 Identities=16% Similarity=0.106 Sum_probs=129.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC---C--CCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---P--GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~--~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..+++++||+.|.||..+.++|+++|..+.++.-+.+...... . ......+.++|+.+..+++++++ .
T Consensus 4 tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~akL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 4 TGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIAKLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred cCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHHHHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 4578999999999999999999999988888776665532211 1 11122355789998887777665 5
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHH----HHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
.|++||.||.. .+.+++....+|+.+ |...+.+..+-. ...+=+|.+||.. |-.+ .|..
T Consensus 84 iDIlINgAGi~-----~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~----GL~P-------~p~~ 147 (261)
T KOG4169|consen 84 IDILINGAGIL-----DDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVA----GLDP-------MPVF 147 (261)
T ss_pred eEEEEcccccc-----cchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccc----ccCc-------cccc
Confidence 79999999974 455688888888755 666778777631 1233577777763 3221 1223
Q ss_pred Cch-HHHHH-----HHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC------CCCcceeeeccHH
Q 020476 162 NDY-LAEVC-----REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL------GSGQQWFSWIHLD 229 (325)
Q Consensus 162 ~~y-~~k~~-----~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~v~v~ 229 (325)
|-| .+|.. .-.....+-.+.|+++..++||.+-.. +...+... +..+ .+.-....-....
T Consensus 148 pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~-------l~~~~~~~-~~~~e~~~~~~~~l~~~~~q~~~ 219 (261)
T KOG4169|consen 148 PVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTD-------LAENIDAS-GGYLEYSDSIKEALERAPKQSPA 219 (261)
T ss_pred hhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHH-------HHHHHHhc-CCcccccHHHHHHHHHcccCCHH
Confidence 334 22210 011122233346999999999976532 11111100 1100 0000011245667
Q ss_pred HHHHHHHHHHcCCCCCceEEeeCCC
Q 020476 230 DIVNLIYEALSNPSYRGVINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~~~~~~~~~ 254 (325)
+++..++.+++.+..+.+|-+..+.
T Consensus 220 ~~a~~~v~aiE~~~NGaiw~v~~g~ 244 (261)
T KOG4169|consen 220 CCAINIVNAIEYPKNGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHHHHhhccCCcEEEEecCc
Confidence 8999999999997655588777664
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.6e-08 Score=83.87 Aligned_cols=165 Identities=16% Similarity=0.114 Sum_probs=104.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCch----hHhhhC--CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQ----WRDCIQ--GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~----~~~~~~--~~d~ 89 (325)
.-.+|||||..||++.+++|+++|++|+.++|+.++.....++ ..+.....+|+.+.+. +.+.+. ++.+
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~VgI 129 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLDVGI 129 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCceEE
Confidence 4689999999999999999999999999999998876554332 1122344578776664 444454 5678
Q ss_pred EEECCCCCCC--CCC---ChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 90 VVNLAGTPIG--TRW---SSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 90 vi~~a~~~~~--~~~---~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|||+|.... ..+ ..........+|+.++..+. .-+.+ .+.+-++.+||.+.. - ..|.
T Consensus 130 LVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~--r~~G~IvnigS~ag~--~---------p~p~ 196 (312)
T KOG1014|consen 130 LVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE--RKKGIIVNIGSFAGL--I---------PTPL 196 (312)
T ss_pred EEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc--CCCceEEEecccccc--c---------cChh
Confidence 9999998642 111 12122445567776644444 44444 456678899887641 1 1122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG 198 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~ 198 (325)
...| .+|...++......++ .|+.+-.+-|..|-++..
T Consensus 197 ~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm~ 238 (312)
T KOG1014|consen 197 LSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKMA 238 (312)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheecccc
Confidence 3344 3444333322222222 489999999999888753
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-07 Score=81.47 Aligned_cols=112 Identities=16% Similarity=0.216 Sum_probs=78.6
Q ss_pred CeEEEECCCchHHHHHHHHHHh-C--CCeEEEEecCCCcccccCCCCCccccC-ceee--cCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQA-D--NHQVRVLTRSRSKAELIFPGKKTRFFP-GVMI--AEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~-~--g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~--~d~~~~~~~~~~~d~vi~~a 94 (325)
|||+|+||+|.+|++++..|.. . ++.+.+++|++........... .. ...+ .+.+++.+.++++|+||.++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~~g~alDl~~---~~~~~~i~~~~~~d~~~~l~~~DiVIita 77 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVTPGVAVDLSH---IPTAVKIKGFSGEDPTPALEGADVVLISA 77 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCCcceehhhhc---CCCCceEEEeCCCCHHHHcCCCCEEEEcC
Confidence 6999999999999999988854 2 4688888887532110011000 01 0112 12456667789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
|.... ...+..+....|+....++++++++ .+.+++|.+.|
T Consensus 78 G~~~~---~~~~R~dll~~N~~i~~~ii~~i~~--~~~~~ivivvs 118 (312)
T PRK05086 78 GVARK---PGMDRSDLFNVNAGIVKNLVEKVAK--TCPKACIGIIT 118 (312)
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEcc
Confidence 97532 2335678888999999999999999 67778877776
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.75 E-value=2.8e-08 Score=86.45 Aligned_cols=76 Identities=24% Similarity=0.199 Sum_probs=63.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
||+|+|+|+ |+||+.++..|++++ .+|++.+|+.++..+..... .......+|+.|.+.+.+++++.|+||||+..
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~ 78 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPP 78 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCc
Confidence 679999997 999999999999998 89999999987765553321 11224568999999999999999999999975
|
|
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-07 Score=77.59 Aligned_cols=66 Identities=14% Similarity=0.248 Sum_probs=43.4
Q ss_pred CCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC----chhHhhhCCCCEEEECCCCC
Q 020476 27 GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE----PQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 27 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~----~~~~~~~~~~d~vi~~a~~~ 97 (325)
.+|||+|.+|+++|+++|++|+++.|+.......... ...+.+... +.+.+.++++|+|||+||..
T Consensus 23 ~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~~~~~~-----v~~i~v~s~~~m~~~l~~~~~~~DivIh~AAvs 92 (229)
T PRK06732 23 HSTGQLGKIIAETFLAAGHEVTLVTTKTAVKPEPHPN-----LSIIEIENVDDLLETLEPLVKDHDVLIHSMAVS 92 (229)
T ss_pred ccchHHHHHHHHHHHhCCCEEEEEECcccccCCCCCC-----eEEEEEecHHHHHHHHHHHhcCCCEEEeCCccC
Confidence 3489999999999999999999999864321100000 111122222 24445567899999999974
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.60 E-value=2.7e-07 Score=76.70 Aligned_cols=94 Identities=16% Similarity=0.156 Sum_probs=70.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|+|+|+||||. |+.|++.|.+.|++|++.+++............ .....+..|.+.+.+.++ ++|+||+++.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~--~~v~~g~l~~~~l~~~l~~~~i~~VIDAtHPf- 76 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQA--LTVHTGALDPQELREFLKRHSIDILVDATHPF- 76 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCC--ceEEECCCCHHHHHHHHHhcCCCEEEEcCCHH-
Confidence 68999999999 999999999999999999998865544433211 012245567788888875 699999998642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
-...+.++.++|++ .++.-+
T Consensus 77 ---------------A~~is~~a~~a~~~--~~ipyl 96 (256)
T TIGR00715 77 ---------------AAQITTNATAVCKE--LGIPYV 96 (256)
T ss_pred ---------------HHHHHHHHHHHHHH--hCCcEE
Confidence 13556788999999 566533
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.56 E-value=1.5e-07 Score=76.97 Aligned_cols=77 Identities=19% Similarity=0.122 Sum_probs=49.7
Q ss_pred CCeEEEECCC----------------chHHHHHHHHHHhCCCeEEEEecCCCcccc-cCCCCCccccCceeecCCchhHh
Q 020476 20 QMTVSVTGAT----------------GFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 20 ~~~ilI~Gat----------------G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
.++||||+|. ||+|++|+++|+++|++|+++++....... ...... ......+....+.+.+
T Consensus 3 gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~~~~~~~~-~~~V~s~~d~~~~l~~ 81 (229)
T PRK09620 3 GKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPNDINNQLE-LHPFEGIIDLQDKMKS 81 (229)
T ss_pred CCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCcccCCcee-EEEEecHHHHHHHHHH
Confidence 5799999885 999999999999999999999875331111 110000 0000111111245666
Q ss_pred hhC--CCCEEEECCCCC
Q 020476 83 CIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 83 ~~~--~~d~vi~~a~~~ 97 (325)
+++ ++|+|||+|+..
T Consensus 82 ~~~~~~~D~VIH~AAvs 98 (229)
T PRK09620 82 IITHEKVDAVIMAAAGS 98 (229)
T ss_pred HhcccCCCEEEECcccc
Confidence 664 689999999974
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.54 E-value=1e-06 Score=76.02 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=70.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCC--CcccccCCCC-Cc--cccCceeecCCchhHhhhCCCCE
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSR--SKAELIFPGK-KT--RFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~--~~~~~~~~~~-~~--~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
||.|+||+|.+|+.++..|+..+. ++..+++++ +......... .. .......+. ....+.++++|+
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~~g~~~Dl~d~~~~~~~~~~i~--~~~~~~~~~aDi 79 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKALEGVVMELQDCAFPLLKGVVIT--TDPEEAFKDVDV 79 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCccceeeeehhhhcccccCCcEEe--cChHHHhCCCCE
Confidence 799999999999999999987652 599999876 3221111000 00 001111222 345678899999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|||+||.+.. ...+..+....|+...+.+...+++.
T Consensus 80 VVitAG~~~~---~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 80 AILVGAFPRK---PGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred EEEeCCCCCC---cCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 9999997522 33457788899999999999999983
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.8e-07 Score=71.62 Aligned_cols=203 Identities=16% Similarity=0.046 Sum_probs=120.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeE--EEEecCCCcccccCCCC-CccccCceeecCCchhH---hhhC----CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQV--RVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWR---DCIQ----GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V--~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~---~~~~----~~d~v 90 (325)
+-||+||++-.||..++..+.+.+.+. .+..|.......+.... ........|+.+...+. ++.+ +-|.|
T Consensus 7 ~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~~~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~ii 86 (253)
T KOG1204|consen 7 KVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAELEGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDII 86 (253)
T ss_pred eEEEEecCCCCccHHHHHHHHhcchHHHHHhhhcccccccceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEE
Confidence 359999999999999999998887654 44444433322211110 00001122333333332 2222 46999
Q ss_pred EECCCCCCCC------CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCC--CCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 91 VNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLINES-PEG--VRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 91 i~~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~--~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
||+||...++ ..+.+.++.+|+.|+-+...+...+... ... .+.+|++||.+.. -+ -+..
T Consensus 87 I~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~aav-~p----------~~~w 155 (253)
T KOG1204|consen 87 IHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSLAAV-RP----------FSSW 155 (253)
T ss_pred EecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecchhhh-cc----------ccHH
Confidence 9999986552 3345678899999998887776655432 112 4679999998762 10 0012
Q ss_pred Cch-HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCC-------cccchHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGG-------ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
..| .+|.+.+........+ +++.+..++||.+-.+... ..+.....++... ..-..+...+.
T Consensus 156 a~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~--------~~~~ll~~~~~ 227 (253)
T KOG1204|consen 156 AAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK--------ESGQLLDPQVT 227 (253)
T ss_pred HHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH--------hcCCcCChhhH
Confidence 346 6777777666555544 3889999999987765311 1111122222111 11236777888
Q ss_pred HHHHHHHHcCC
Q 020476 232 VNLIYEALSNP 242 (325)
Q Consensus 232 a~a~~~~~~~~ 242 (325)
++.+..++++.
T Consensus 228 a~~l~~L~e~~ 238 (253)
T KOG1204|consen 228 AKVLAKLLEKG 238 (253)
T ss_pred HHHHHHHHHhc
Confidence 88888888776
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.1e-07 Score=70.11 Aligned_cols=216 Identities=17% Similarity=0.174 Sum_probs=130.0
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCCchhHhhhC-------CCCEEEEC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVNL 93 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~~ 93 (325)
..+|||+...+|...++.|..+|..|..++-..++.....+ ......+...|+.+++++..++. +.|+.+||
T Consensus 11 valvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~vnc 90 (260)
T KOG1199|consen 11 VALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDALVNC 90 (260)
T ss_pred eEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeeeeec
Confidence 57999999999999999999999999999988777544433 23333455678888888877663 57999999
Q ss_pred CCCCCC---------CCCChhhHHHHHHHhhHHHHHHHHHHhcC-C-----CCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 94 AGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES-P-----EGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 94 a~~~~~---------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~-----~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
||.... .....++.....++|+.++.|+++....+ + .+..|=|.+-+.++..|....+.
T Consensus 91 agia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaafdgq~gq------ 164 (260)
T KOG1199|consen 91 AGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAAFDGQTGQ------ 164 (260)
T ss_pred cceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeeeecCccch------
Confidence 997422 22345566778889999999988754322 1 23345556666665435433221
Q ss_pred CCCCch-HHHHHHH--HHHHHH-hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCRE--WEGTAL-KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~--~~~~~~-~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
..| .+|...- ..-... ....|++++.+-||.+-.|--..+++-...+. .+.+..+. -.-|..+.+..
T Consensus 165 ---aaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fl---a~~ipfps---rlg~p~eyahl 235 (260)
T KOG1199|consen 165 ---AAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFL---AQLIPFPS---RLGHPHEYAHL 235 (260)
T ss_pred ---hhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHH---HHhCCCch---hcCChHHHHHH
Confidence 122 1111000 000000 01138999999988765553333333232221 11122222 13455667777
Q ss_pred HHHHHcCCCCCc-eEEeeC
Q 020476 235 IYEALSNPSYRG-VINGTA 252 (325)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~ 252 (325)
+-.+++++..+| ++.+.+
T Consensus 236 vqaiienp~lngevir~dg 254 (260)
T KOG1199|consen 236 VQAIIENPYLNGEVIRFDG 254 (260)
T ss_pred HHHHHhCcccCCeEEEecc
Confidence 777888887666 554443
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.4e-07 Score=68.62 Aligned_cols=105 Identities=17% Similarity=0.199 Sum_probs=72.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|||.|+|++|.+|++++..|...+ .++..++++++......... ........+..-.....+.++++|+||.+||.+
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~~~~~~~~~aDivvitag~~ 80 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITSGDYEALKDADIVVITAGVP 80 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEESSGGGGTTESEEEETTSTS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhhcccccccccccccccccccEEEEecccc
Confidence 699999999999999999999886 48999999865432211000 000011112221224456778999999999975
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.. ......+....|+.-.+.+.+.+.+.
T Consensus 81 ~~---~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 81 RK---PGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp SS---TTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cc---ccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 22 23346788899999999999999984
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.43 E-value=3.1e-06 Score=73.11 Aligned_cols=169 Identities=13% Similarity=0.192 Sum_probs=105.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCc--ccccCC-CCCc--cccCceeecCCchhHhhhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIFP-GKKT--RFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~~-~~~~--~~~~~~d~~d~~~~~~~~~~~ 87 (325)
++||.|+|++|.+|..++..|+..|. ++..+++.+.. ...... .... .....+.+. ....+.++++
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da 79 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDCAFPLLAEIVIT--DDPNVAFKDA 79 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhccccccCceEEe--cCcHHHhCCC
Confidence 46999999999999999999988764 79999985433 211111 0000 001122333 2334678899
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCc-eecCC--CCCCCch
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE-VFDES--SPSGNDY 164 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~-~~~e~--~~~~~~y 164 (325)
|+||.+||.+.. ...+..+....|+.-.+.+.+.+++.......++.+|-- + +.-.. ..... -|+..-|
T Consensus 80 DivvitaG~~~k---~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNP-v----D~~t~~~~k~sg~~p~~~Vi 151 (322)
T cd01338 80 DWALLVGAKPRG---PGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNP-C----NTNALIAMKNAPDIPPDNFT 151 (322)
T ss_pred CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCc-H----HHHHHHHHHHcCCCChHheE
Confidence 999999997522 234567888999999999999999842112334444420 0 00000 01111 1222233
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~ 198 (325)
.++...+.....+.+..+++...+|...|||+.+
T Consensus 152 G~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 152 AMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred EehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 4566667777777777899999999989999864
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.8e-06 Score=71.49 Aligned_cols=96 Identities=13% Similarity=0.132 Sum_probs=69.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCcccccCCCCCccccCceeecCCc-----------hhHhh
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-----------QWRDC 83 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~-----------~~~~~ 83 (325)
||.|+||+|.+|+.++..|...+. ++..+++.+...... ....|+.|.. ...+.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~~a~--------g~~~Dl~d~~~~~~~~~~~~~~~~~~ 72 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMKVLE--------GVVMELMDCAFPLLDGVVPTHDPAVA 72 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcccccc--------eeEeehhcccchhcCceeccCChHHH
Confidence 689999999999999999987542 599999865432110 1112222222 34567
Q ss_pred hCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 84 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
++++|+||++||.+.. ...+..+....|+...+.+.+.+.+.
T Consensus 73 ~~~aDiVVitAG~~~~---~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 73 FTDVDVAILVGAFPRK---EGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred hCCCCEEEEcCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 8899999999997522 23346788899999999999999983
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.33 E-value=4.1e-06 Score=67.40 Aligned_cols=176 Identities=16% Similarity=0.079 Sum_probs=107.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-----eEEEEecCCCcccccCC--------CCCccccCceeecCCchhHhhh-
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELIFP--------GKKTRFFPGVMIAEEPQWRDCI- 84 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~~~~~~--------~~~~~~~~~~d~~d~~~~~~~~- 84 (325)
+++-++|||+++.+|-.|+..|++... .+.+..|+.++.+..-. ......+..+|+.+..++.++.
T Consensus 2 ~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~yvlvD~sNm~Sv~~A~~ 81 (341)
T KOG1478|consen 2 MRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVTYVLVDVSNMQSVFRASK 81 (341)
T ss_pred CceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEEEEEEehhhHHHHHHHHH
Confidence 445699999999999999999998743 46667787776544321 1111223456666665555443
Q ss_pred ------CCCCEEEECCCCCCCC------------------------------CCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 85 ------QGSTAVVNLAGTPIGT------------------------------RWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 85 ------~~~d~vi~~a~~~~~~------------------------------~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+..|.|+-+||..... .-+.+...++++.||-|.--++..+..+
T Consensus 82 di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfyli~~l~pl 161 (341)
T KOG1478|consen 82 DIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFYLIRELEPL 161 (341)
T ss_pred HHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhhhHhhhhhH
Confidence 3679999999874221 1123345667889998876665544332
Q ss_pred -C-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhcC---CceEEEEEeceEEcC
Q 020476 129 -P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGK 196 (325)
Q Consensus 129 -~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~i~g~ 196 (325)
+ .....+|++||..+ -...-+..=-+......+| .+|+.......+..++. |+.-.++.||.....
T Consensus 162 l~~~~~~~lvwtSS~~a--~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 162 LCHSDNPQLVWTSSRMA--RKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hhcCCCCeEEEEeeccc--ccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 1 34448999999765 2221111101122234567 67877777766665543 677778888866554
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=8.8e-07 Score=76.30 Aligned_cols=71 Identities=27% Similarity=0.392 Sum_probs=52.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-C-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|+||||+|+||+.++++|+++ | .+++++.|+..+...+... +...++. .+.+++.++|+|||+++.
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~e-----l~~~~i~---~l~~~l~~aDiVv~~ts~ 225 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAE-----LGGGKIL---SLEEALPEADIVVWVASM 225 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHH-----hccccHH---hHHHHHccCCEEEECCcC
Confidence 4579999999999999999999864 4 6899999986654443322 1122332 466788899999999986
Q ss_pred C
Q 020476 97 P 97 (325)
Q Consensus 97 ~ 97 (325)
+
T Consensus 226 ~ 226 (340)
T PRK14982 226 P 226 (340)
T ss_pred C
Confidence 4
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.30 E-value=1.3e-06 Score=70.28 Aligned_cols=78 Identities=19% Similarity=0.242 Sum_probs=57.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC---ccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++++|+||+|.+|+.+++.|++.|++|++++|+.++......... ......+|..+.+.+.++++++|+||++.+
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at~ 106 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAGA 106 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECCC
Confidence 45799999999999999999999999999999998755433221100 000122455677777888899999999876
Q ss_pred C
Q 020476 96 T 96 (325)
Q Consensus 96 ~ 96 (325)
.
T Consensus 107 ~ 107 (194)
T cd01078 107 A 107 (194)
T ss_pred C
Confidence 4
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.4e-06 Score=73.16 Aligned_cols=100 Identities=16% Similarity=0.152 Sum_probs=64.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh-hhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~-~~~~~d~vi~~a~~ 96 (325)
++|||.|+||||++|..|++.|.++ +++|+.+.+..+..+....... .....+..+.+.++. .++++|+||.+.+.
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~~~~--~l~~~~~~~~~~~~~~~~~~~DvVf~Alp~ 114 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGSVFP--HLITQDLPNLVAVKDADFSDVDAVFCCLPH 114 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchhhCc--cccCccccceecCCHHHhcCCCEEEEcCCH
Confidence 5679999999999999999999988 5799999886544333221110 011223332333332 25789999998752
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
....+++..+.+ + .++|-+|+..-
T Consensus 115 -------------------~~s~~i~~~~~~---g-~~VIDlSs~fR 138 (381)
T PLN02968 115 -------------------GTTQEIIKALPK---D-LKIVDLSADFR 138 (381)
T ss_pred -------------------HHHHHHHHHHhC---C-CEEEEcCchhc
Confidence 134456666533 3 57888888764
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.7e-05 Score=68.36 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=74.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCC--CcccccCCCC-Cc--cccCceeecCCchhHhhhCCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR--SKAELIFPGK-KT--RFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~--~~~~~~~~~~-~~--~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
|||.|+|++|++|..++..|+..|+ +|++++|.+ +......... .. ......++.-..+. +.++++|+||.+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~~~i~~~~d~-~~l~~aDiViit 79 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGIDAEIKISSDL-SDVAGSDIVIIT 79 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhchhccCCCcEEEECCCH-HHhCCCCEEEEe
Confidence 6999999999999999999999986 599999954 2221111100 00 00011223222234 348999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
+|.+.. ...+..+....|+...+.+++.+.+.. ....++.+++
T Consensus 80 ag~p~~---~~~~r~dl~~~n~~i~~~~~~~i~~~~-~~~~viv~~n 122 (309)
T cd05294 80 AGVPRK---EGMSRLDLAKKNAKIVKKYAKQIAEFA-PDTKILVVTN 122 (309)
T ss_pred cCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHHC-CCeEEEEeCC
Confidence 996522 223456777889999999999988842 2234555553
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.3e-06 Score=78.05 Aligned_cols=73 Identities=25% Similarity=0.306 Sum_probs=54.8
Q ss_pred EEEECCCchHHHHHHHHHHhCC-C-eEEEEecCCCcccccCC--CCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADN-H-QVRVLTRSRSKAELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g-~-~V~~~~r~~~~~~~~~~--~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
|+|+|+ |++|+.+++.|++++ + +|++.+|+..+...... .........+|+.|.+++.++++++|+||||++.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp 77 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGP 77 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSG
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCcc
Confidence 799999 999999999999986 4 89999999887555433 1112225568888999999999999999999985
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-05 Score=67.49 Aligned_cols=102 Identities=15% Similarity=0.217 Sum_probs=72.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeec---CCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|++|.+|+.++-.|+.++ .++.+++.+...... ...... .....+. ..+++.+.++++|+||.+||
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~~a~g~a-lDL~~~--~~~~~i~~~~~~~~~y~~~~daDivvitaG 77 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIVNTPGVA-ADLSHI--NTPAKVTGYLGPEELKKALKGADVVVIPAG 77 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecCccceee-hHhHhC--CCcceEEEecCCCchHHhcCCCCEEEEeCC
Confidence 699999999999999999998887 489999887111111 111100 0112232 22445677899999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ...+..+....|..-.+.+.+.+++.
T Consensus 78 ~~~k---~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 78 VPRK---PGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7522 23457788899999999999999984
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.19 E-value=9.2e-06 Score=70.84 Aligned_cols=69 Identities=25% Similarity=0.323 Sum_probs=46.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||+|+||||++|+.|++.|.+++| ++.++.+..+..+..... ...+.+.|.+. ..++++|+||.+++
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~~~-----g~~i~v~d~~~--~~~~~vDvVf~A~g 72 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELSFK-----GKELKVEDLTT--FDFSGVDIALFSAG 72 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeeeeC-----CceeEEeeCCH--HHHcCCCEEEECCC
Confidence 47999999999999999999999876 458887765444333211 11122223332 23468999999986
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.16 E-value=5.2e-06 Score=73.64 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=55.8
Q ss_pred cCCeEEEECC----------------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh
Q 020476 19 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 19 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
..++|+|||| +|.+|.+++++|.++|++|++++++.+. . ... ....+|+.+.+++.+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~-~~~-----~~~~~dv~~~~~~~~ 259 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-P-TPA-----GVKRIDVESAQEMLD 259 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-c-CCC-----CcEEEccCCHHHHHH
Confidence 4579999999 9999999999999999999999987631 1 111 023467888777766
Q ss_pred hh----CCCCEEEECCCCC
Q 020476 83 CI----QGSTAVVNLAGTP 97 (325)
Q Consensus 83 ~~----~~~d~vi~~a~~~ 97 (325)
.+ .++|++||+||..
T Consensus 260 ~v~~~~~~~DilI~~Aav~ 278 (399)
T PRK05579 260 AVLAALPQADIFIMAAAVA 278 (399)
T ss_pred HHHHhcCCCCEEEEccccc
Confidence 55 3689999999974
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=98.12 E-value=8.2e-06 Score=66.98 Aligned_cols=63 Identities=21% Similarity=0.396 Sum_probs=44.9
Q ss_pred CCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-------CCCCEEEECCCCC
Q 020476 27 GATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVNLAGTP 97 (325)
Q Consensus 27 GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-------~~~d~vi~~a~~~ 97 (325)
.++|.||.++++.|+++|++|++++|.... . ... ...+|+.+.+...+++ .++|++||+||..
T Consensus 22 ~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~l-~---~~~----~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 22 HSTGHLGKIITETFLSAGHEVTLVTTKRAL-K---PEP----HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred CcccHHHHHHHHHHHHCCCEEEEEcChhhc-c---ccc----CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 458999999999999999999998763211 1 100 2247887766555432 3689999999964
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=98.12 E-value=3.7e-05 Score=56.60 Aligned_cols=72 Identities=18% Similarity=0.255 Sum_probs=42.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCC-cccccCCCCC-ccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS-KAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~-~~~~~~~~~~-~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+||||++|+.|++.|+++. .++..+..+.. ....+..... ........+.+ .-.+.+.++|+||.|.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dvvf~a~~ 75 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVED--ADPEELSDVDVVFLALP 75 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEE--TSGHHHTTESEEEE-SC
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEee--cchhHhhcCCEEEecCc
Confidence 79999999999999999999874 36555554444 3333222110 00011122223 22233489999999975
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.11 E-value=1.1e-06 Score=73.94 Aligned_cols=76 Identities=20% Similarity=0.287 Sum_probs=60.3
Q ss_pred eEEEECCCchHHHHHHHHHHh----CCCeEEEEecCCCcccccCCCCC--------ccccCceeecCCchhHhhhCCCCE
Q 020476 22 TVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRSKAELIFPGKK--------TRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
-++|.|||||-|.++++++.+ .+...-+..|++.+..+..+... ......+|..|++++.+.++++-+
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~i~i~D~~n~~Sl~emak~~~v 86 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSVILIADSANEASLDEMAKQARV 86 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhccCCCcccceEEEecCCCHHHHHHHHhhhEE
Confidence 589999999999999999998 57788888999877554432211 111234788899999999999999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
|+||+|+.
T Consensus 87 ivN~vGPy 94 (423)
T KOG2733|consen 87 IVNCVGPY 94 (423)
T ss_pred EEeccccc
Confidence 99999975
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.00029 Score=56.26 Aligned_cols=217 Identities=11% Similarity=0.048 Sum_probs=124.9
Q ss_pred cCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..+|+||+|-.- -|+..|++.|.++|.++......+.-. .++.+.........||+.+.+++.+++. +
T Consensus 5 ~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e~l~krv~~la~~~~s~~v~~cDV~~d~~i~~~f~~i~~~~g~ 84 (259)
T COG0623 5 EGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGERLEKRVEELAEELGSDLVLPCDVTNDESIDALFATIKKKWGK 84 (259)
T ss_pred CCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHHHhhccCCeEEecCCCCHHHHHHHHHHHHHhhCc
Confidence 457999999754 699999999999999887776654222 2222222112235689998888877664 6
Q ss_pred CCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
.|.++|+.+.... .+.+.+......++-.-+...+.++++.+......++-++= +|...
T Consensus 85 lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtY-----lgs~r--------- 150 (259)
T COG0623 85 LDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTY-----LGSER--------- 150 (259)
T ss_pred ccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEe-----cccee---------
Confidence 8999999986421 11223333444444455566677777765444455554441 22111
Q ss_pred CCCch----HHHHHHHHHHHHHhhcC---CceEEEEEeceEEcCCCCcccchHHHHH-HHcCCCCCCCcceeeeccHHHH
Q 020476 160 SGNDY----LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 160 ~~~~y----~~k~~~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
..|.| ..|...|.-......+. |+++..+-.|.|-.-.......+..++. .....|+ +..+..+||
T Consensus 151 ~vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl------~r~vt~eeV 224 (259)
T COG0623 151 VVPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPL------RRNVTIEEV 224 (259)
T ss_pred ecCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCc------cCCCCHHHh
Confidence 12334 67877777777666654 5666655555443221111111222221 1122232 235668888
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
.+....++.+-. .+.+.++.+|..
T Consensus 225 G~tA~fLlSdLssgiTGei~yVD~G~~ 251 (259)
T COG0623 225 GNTAAFLLSDLSSGITGEIIYVDSGYH 251 (259)
T ss_pred hhhHHHHhcchhcccccceEEEcCCce
Confidence 888777776532 445777777653
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.5e-05 Score=58.84 Aligned_cols=73 Identities=14% Similarity=0.181 Sum_probs=44.2
Q ss_pred CeEEEECCCchHHHHHHHHHHh-CCCeEEEEe-cCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||+|+|++|.+|+.+++.+.+ .++++.+.. |+++... -.............+.-.+++.++++.+|+||++.
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~-g~d~g~~~~~~~~~~~v~~~l~~~~~~~DVvIDfT 75 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKV-GKDVGELAGIGPLGVPVTDDLEELLEEADVVIDFT 75 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTT-TSBCHHHCTSST-SSBEBS-HHHHTTH-SEEEEES
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCcccc-cchhhhhhCcCCcccccchhHHHhcccCCEEEEcC
Confidence 6999999999999999999998 577866654 4442211 01100000001122223367788888899999985
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.02 E-value=0.00011 Score=63.07 Aligned_cols=101 Identities=19% Similarity=0.235 Sum_probs=71.3
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeec---CCchhHhhhCCCCEEEECCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---d~~~~~~~~~~~d~vi~~a~~ 96 (325)
||.|+|++|.+|+.++-.|+..+. ++.++++++..... ...... ....++. +.+++.+.++++|+||.+||.
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~g~a-~DL~~~--~~~~~i~~~~~~~~~~~~~~daDivvitaG~ 77 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAAGVA-ADLSHI--PTAASVKGFSGEEGLENALKGADVVVIPAGV 77 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCcEEE-chhhcC--CcCceEEEecCCCchHHHcCCCCEEEEeCCC
Confidence 689999999999999999988774 89999987622111 111110 1112332 123456788999999999997
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.. ......+....|+.-.+.+.+.+.+.
T Consensus 78 ~~~---~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 78 PRK---PGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CCC---CCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 522 33456788889999999999999884
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.6e-05 Score=66.70 Aligned_cols=75 Identities=16% Similarity=0.211 Sum_probs=46.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCC-ccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||||+|+||||++|+.+++.|.+. +++++++.++.+.......... .......++.+.+.. ..+++|+||.|..
T Consensus 1 ~m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~~--~~~~vD~Vf~alP 77 (343)
T PRK00436 1 MMIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVHPHLRGLVDLVLEPLDPE--ILAGADVVFLALP 77 (343)
T ss_pred CCeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhCcccccccCceeecCCHH--HhcCCCEEEECCC
Confidence 4579999999999999999999887 5788887774433222211100 000111233333332 4468999999875
|
|
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.00 E-value=5.1e-06 Score=69.53 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=59.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|-|||||.|..++++|+++|.+-....|+..+...+...... ......+.+++.+.+.+.+.++|+||+|+.
T Consensus 8 d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~LG~-~~~~~p~~~p~~~~~~~~~~~VVlncvGPy 82 (382)
T COG3268 8 DIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASLGP-EAAVFPLGVPAALEAMASRTQVVLNCVGPY 82 (382)
T ss_pred eEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhcCc-cccccCCCCHHHHHHHHhcceEEEeccccc
Confidence 699999999999999999999999988889998876654332210 022334446889999999999999999976
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.5e-05 Score=64.21 Aligned_cols=104 Identities=16% Similarity=0.224 Sum_probs=71.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCc--ccccC-CCCCc--cccCceeecCCchhHhhhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIF-PGKKT--RFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~-~~~~~--~~~~~~d~~d~~~~~~~~~~~ 87 (325)
+.||.|+||+|++|+.++..|+..+. ++..+++.+.. ..... ..... .......+. ....+.++++
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~~~~~~~i~--~~~~~~~~da 80 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFPLLAGVVAT--TDPEEAFKDV 80 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhccccccCCcEEe--cChHHHhCCC
Confidence 45999999999999999999988773 79999886522 21111 00000 001112222 2334667899
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|+||.+||.+.. ...+..+....|+...+.+.+.+++.
T Consensus 81 DvVVitAG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 81 DAALLVGAFPRK---PGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999997522 34467788999999999999999984
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=98.00 E-value=7.2e-05 Score=64.94 Aligned_cols=69 Identities=25% Similarity=0.330 Sum_probs=44.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe---EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+||+|+||||++|..|++.|.+++|. +..+.......+.+... ....++.+.+.. + ++++|+||.+++
T Consensus 4 ~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~s~~~aG~~l~~~-----~~~l~~~~~~~~-~-~~~vD~vFla~p 75 (336)
T PRK05671 4 PLDIAVVGATGTVGEALVQILEERDFPVGTLHLLASSESAGHSVPFA-----GKNLRVREVDSF-D-FSQVQLAFFAAG 75 (336)
T ss_pred CCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEECcccCCCeeccC-----CcceEEeeCChH-H-hcCCCEEEEcCC
Confidence 479999999999999999999987764 33443332222222111 122445444433 2 478999999875
|
|
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.99 E-value=8.4e-05 Score=64.31 Aligned_cols=115 Identities=19% Similarity=0.255 Sum_probs=74.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCc--ccccC-CCCCc--cccCceeecCCchhHhhhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSK--AELIF-PGKKT--RFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~--~~~~~-~~~~~--~~~~~~d~~d~~~~~~~~~~~ 87 (325)
++||.|+|++|.+|+.++..|+..+. ++..+++++.. ..... ..... .......+. ....+.++++
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~~~~~~~~~i~--~~~y~~~~da 81 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCAFPLLAGVVIT--DDPNVAFKDA 81 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhhhhhcCCcEEe--cChHHHhCCC
Confidence 46999999999999999998887652 78999886532 11111 00000 001122232 2334667899
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
|+||.+||.+.. ...+..+....|+.-.+.+.+.+.++......++.+|
T Consensus 82 DiVVitaG~~~k---~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 130 (326)
T PRK05442 82 DVALLVGARPRG---PGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVG 130 (326)
T ss_pred CEEEEeCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 999999996522 2346778889999999999999988422233444444
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.94 E-value=7.3e-06 Score=61.59 Aligned_cols=76 Identities=18% Similarity=0.182 Sum_probs=57.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...++++|+|+ |..|+.++..|.+.|.+ |+++.|+.++...+..... ...+...+.+++.+.+.++|+||++.+.
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~---~~~~~~~~~~~~~~~~~~~DivI~aT~~ 85 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFG---GVNIEAIPLEDLEEALQEADIVINATPS 85 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHT---GCSEEEEEGGGHCHHHHTESEEEE-SST
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcC---ccccceeeHHHHHHHHhhCCeEEEecCC
Confidence 34579999996 88999999999999975 9999999877655543211 2235566677777888899999999875
Q ss_pred C
Q 020476 97 P 97 (325)
Q Consensus 97 ~ 97 (325)
.
T Consensus 86 ~ 86 (135)
T PF01488_consen 86 G 86 (135)
T ss_dssp T
T ss_pred C
Confidence 4
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.92 E-value=7.5e-05 Score=64.50 Aligned_cols=104 Identities=18% Similarity=0.238 Sum_probs=72.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCC-Cc-cccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGK-KT-RFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~-~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
..+||.|+|+ |.+|..++-.|+..|. ++.+++++.+......... .. .......+.. +.. +.++++|+||.+|
T Consensus 5 ~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~i~~-~~~-~~~~~adivIita 81 (315)
T PRK00066 5 QHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTKIYA-GDY-SDCKDADLVVITA 81 (315)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeEEEe-CCH-HHhCCCCEEEEec
Confidence 4469999997 9999999999998885 8999999776532211100 00 0011233332 334 4579999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|.+.. ...+..+....|+...+.+++.+++.
T Consensus 82 g~~~k---~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 82 GAPQK---PGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 97522 23456788889999999999999883
|
|
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.90 E-value=5.7e-05 Score=65.32 Aligned_cols=72 Identities=18% Similarity=0.232 Sum_probs=49.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-----------CCCCc------cccCceeecCCchhHhh
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----------PGKKT------RFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------~~~~~------~~~~~~d~~d~~~~~~~ 83 (325)
|+|.|+| .|.+|..++..|+++|++|++++|+++...... ..... ....++.. ..++.++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~i~~--~~~~~~a 79 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGRLEDLAAFDLLDGEAPDAVLARIRV--TDSLADA 79 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCchhhHHHHhcCeEE--ECcHHHh
Confidence 5899999 799999999999999999999999875433211 10000 00001122 2356667
Q ss_pred hCCCCEEEECCC
Q 020476 84 IQGSTAVVNLAG 95 (325)
Q Consensus 84 ~~~~d~vi~~a~ 95 (325)
++++|+|+.+..
T Consensus 80 ~~~ad~Vi~avp 91 (308)
T PRK06129 80 VADADYVQESAP 91 (308)
T ss_pred hCCCCEEEECCc
Confidence 789999999874
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.89 E-value=0.00018 Score=62.30 Aligned_cols=104 Identities=18% Similarity=0.186 Sum_probs=69.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|+|+ |.+|..++..|+..|. +|++++++++....... ...........+....++ +.++++|+||.+++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~~~~~~i~~~~d~-~~~~~aDiVii~~~ 79 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPVEGFDTKITGTNDY-EDIAGSDVVVITAG 79 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhhcCCCcEEEeCCCH-HHHCCCCEEEECCC
Confidence 579999998 9999999999998765 99999997765422111 000000011223222334 45789999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+... .....+....|+.....+++.+.+.
T Consensus 80 ~p~~~---~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 80 VPRKP---GMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred CCCCc---CCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 65322 2245566678888889998888873
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.88 E-value=0.00011 Score=63.56 Aligned_cols=102 Identities=21% Similarity=0.268 Sum_probs=71.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccc---cCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~---~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+||.|+|+ |.+|+.++..|+..| ++|++++|+++............. .....+. .... +.++++|+||+++|
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~i~-~~~~-~~l~~aDIVIitag 77 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVKIK-AGDY-SDCKDADIVVITAG 77 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeEEE-cCCH-HHhCCCCEEEEccC
Confidence 48999995 999999999999988 689999998776443322110000 0011222 1223 34689999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ...+..+....|+.-.+.+.+.+++.
T Consensus 78 ~~~~---~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 78 APQK---PGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7522 23456788889999999999999984
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.87 E-value=8.1e-05 Score=65.43 Aligned_cols=38 Identities=34% Similarity=0.560 Sum_probs=31.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCc
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSK 56 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~ 56 (325)
||+||+|+||||++|+.+++.|.+..+ +++++.++.++
T Consensus 2 ~~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 2 MKLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred CCcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 457999999999999999999998754 88888665543
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00036 Score=59.35 Aligned_cols=112 Identities=22% Similarity=0.271 Sum_probs=74.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCC-CccccC--ceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK-KTRFFP--GVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~-~~~~~~--~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|| |+||+.++-.|+.++ .++..+++............ ....+. ..++..... .+.++++|+|+-.||
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~~i~~~~~-y~~~~~aDiVvitAG 78 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHAAAPLGSDVKITGDGD-YEDLKGADIVVITAG 78 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhcchhccCceEEecCCC-hhhhcCCCEEEEeCC
Confidence 58999999 999999999997775 48999999854432211110 000011 133333222 456789999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
.+.. ......+.+..|..-.+.+.+...+. ...-++++-
T Consensus 79 ~prK---pGmtR~DLl~~Na~I~~~i~~~i~~~--~~d~ivlVv 117 (313)
T COG0039 79 VPRK---PGMTRLDLLEKNAKIVKDIAKAIAKY--APDAIVLVV 117 (313)
T ss_pred CCCC---CCCCHHHHHHhhHHHHHHHHHHHHhh--CCCeEEEEe
Confidence 7622 33456788999999999999999983 333444443
|
|
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.8e-05 Score=61.91 Aligned_cols=74 Identities=22% Similarity=0.378 Sum_probs=58.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|+++|.| .|-+|..+++.|.+.||+|+++.++++................+|-.|++.+.++ +.++|+++-+.+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~ 75 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATG 75 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeC
Confidence 6899999 5999999999999999999999999887655222111111345777899999888 689999998876
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.0001 Score=64.65 Aligned_cols=99 Identities=15% Similarity=0.193 Sum_probs=57.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCc-cccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKT-RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~-~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|||.|+||||++|..+++.|.+. +.++..+ +++.+..+........ ......++.+. ...++.+++|+||.|.+..
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~DvVf~alP~~ 79 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVHPHLRGLVDLNLEPI-DEEEIAEDADVVFLALPHG 79 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhCccccccCCceeecC-CHHHhhcCCCEEEECCCch
Confidence 58999999999999999999877 4678755 4433222222110000 00001122222 2344446899999997521
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeee
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~ 142 (325)
....++..+.+ .+ .++|=+|+..
T Consensus 80 -------------------~s~~~~~~~~~--~G-~~VIDlS~~f 102 (346)
T TIGR01850 80 -------------------VSAELAPELLA--AG-VKVIDLSADF 102 (346)
T ss_pred -------------------HHHHHHHHHHh--CC-CEEEeCChhh
Confidence 23355566555 34 5677777654
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=4.1e-05 Score=66.80 Aligned_cols=77 Identities=13% Similarity=0.006 Sum_probs=54.0
Q ss_pred CCeEEEECCCchHHHH--HHHHHHhCCCeEEEEecCCCccc---------------ccC-CCCCccccCceeecCCchhH
Q 020476 20 QMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAE---------------LIF-PGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~---------------~~~-~~~~~~~~~~~d~~d~~~~~ 81 (325)
.+++||||+++.+|.+ +++.| +.|.+|.++++..+... ... ..........+|+.+++.+.
T Consensus 41 gK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~v~ 119 (398)
T PRK13656 41 PKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEIKQ 119 (398)
T ss_pred CCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHH
Confidence 4699999999999999 89999 99999988885331111 111 11111123467999888776
Q ss_pred hhhC-------CCCEEEECCCCC
Q 020476 82 DCIQ-------GSTAVVNLAGTP 97 (325)
Q Consensus 82 ~~~~-------~~d~vi~~a~~~ 97 (325)
++++ ++|++||++|.+
T Consensus 120 ~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 120 KVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHhcCCCCEEEECCccC
Confidence 5543 689999999976
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00045 Score=57.99 Aligned_cols=67 Identities=18% Similarity=0.305 Sum_probs=47.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEe-cCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||+|+|++|.+|+.+++.+.+. +.++.++. ++++..... . ..++...+++.++++++|+||+++.
T Consensus 1 ~mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~~-~--------~~~i~~~~dl~~ll~~~DvVid~t~ 69 (257)
T PRK00048 1 MIKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVGQ-G--------ALGVAITDDLEAVLADADVLIDFTT 69 (257)
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc-C--------CCCccccCCHHHhccCCCEEEECCC
Confidence 479999999999999999988764 57877754 444332221 1 1233345667777778999999974
|
|
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.0003 Score=60.75 Aligned_cols=100 Identities=22% Similarity=0.346 Sum_probs=69.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|+ |.+|..++..|+..| .+|.++++++..... +..... ......+.. ... +.++++|+||.++
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~--~~~~~~i~~-~d~-~~l~~aDiViita 75 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHGTP--FVKPVRIYA-GDY-ADCKGADVVVITA 75 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcccc--ccCCeEEee-CCH-HHhCCCCEEEEcc
Confidence 58999996 999999999999998 689999998755432 111110 011122221 233 4578999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+.. ...+..+....|+...+.+.+.+++.
T Consensus 76 ~~~~~---~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 76 GANQK---PGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 86522 23345677888999999999998884
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0002 Score=61.98 Aligned_cols=76 Identities=26% Similarity=0.437 Sum_probs=56.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCcee-----------ecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| +||+|-.....|++.||+|++++.++++.+.+......-.-++++ +.=..+..+++++.|+
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~PI~EpgLe~ll~~~~~~gRl~fTtd~~~a~~~adv 79 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGISPIYEPGLEELLKENLASGRLRFTTDYEEAVKDADV 79 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCCCCcCccHHHHHHhccccCcEEEEcCHHHHHhcCCE
Confidence 7999999 899999999999999999999999988766554332111111111 2233466778889999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
+|-+.|-+
T Consensus 80 ~fIavgTP 87 (414)
T COG1004 80 VFIAVGTP 87 (414)
T ss_pred EEEEcCCC
Confidence 99998865
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00015 Score=63.35 Aligned_cols=67 Identities=22% Similarity=0.353 Sum_probs=43.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEE---EEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVR---VLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||+|+||||++|..|++.|.+++|.+. .+.+..+........ .....+.|.+ ...++++|+||.+++
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~~~~-----~~~~~~~~~~--~~~~~~~D~v~~a~g 70 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKVTFK-----GKELEVNEAK--IESFEGIDIALFSAG 70 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCeeeeC-----CeeEEEEeCC--hHHhcCCCEEEECCC
Confidence 589999999999999999999888644 444654433333211 1112222332 233578999999987
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00068 Score=58.36 Aligned_cols=102 Identities=20% Similarity=0.217 Sum_probs=69.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|+ |++|..++..|+..|+ +|+++++.+...... ..... .......+.-..++.+ ++++|+||-++|
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~~~-~~~~~~~i~~t~d~~~-~~~aDiVIitag 78 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEASP-VGGFDTKVTGTNNYAD-TANSDIVVITAG 78 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhhhh-ccCCCcEEEecCCHHH-hCCCCEEEEcCC
Confidence 69999996 9999999999999886 899999865533211 11000 0001122322234544 689999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ......+....|......+++.+.+.
T Consensus 79 ~p~~---~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 79 LPRK---PGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred CCCC---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6522 12345677889999999999998884
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.67 E-value=3.6e-05 Score=59.96 Aligned_cols=66 Identities=20% Similarity=0.236 Sum_probs=49.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.++| .|-.|+.+++.|++.|++|++++|++++...+.... +. -.++..++++++|+|+-|..
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g-------~~--~~~s~~e~~~~~dvvi~~v~ 66 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAG-------AE--VADSPAEAAEQADVVILCVP 66 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTT-------EE--EESSHHHHHHHBSEEEE-SS
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhh-------hh--hhhhhhhHhhcccceEeecc
Confidence 67999999 699999999999999999999999887765544321 22 33466677788899998864
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00018 Score=65.14 Aligned_cols=67 Identities=22% Similarity=0.277 Sum_probs=48.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+||+|.+|..+++.|.+.|++|++++|+++........ .++.. .+...+.+.++|+||-+..
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~------~gv~~--~~~~~e~~~~aDvVIlavp 67 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE------LGVEY--ANDNIDAAKDADIVIISVP 67 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH------cCCee--ccCHHHHhccCCEEEEecC
Confidence 6899999999999999999999999999999987553222111 01221 2234556778999998864
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.66 E-value=6.9e-05 Score=59.36 Aligned_cols=69 Identities=25% Similarity=0.200 Sum_probs=48.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||++.|.| +|.||..|++.|.+.||+|+.-+|+.++......... .+. ...-...++.+.+|+||-...
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l---~~~---i~~~~~~dA~~~aDVVvLAVP 69 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAAL---GPL---ITGGSNEDAAALADVVVLAVP 69 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhh---ccc---cccCChHHHHhcCCEEEEecc
Confidence 56777766 8999999999999999999999776655332221111 111 244456677889999998753
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00051 Score=56.43 Aligned_cols=113 Identities=18% Similarity=0.169 Sum_probs=73.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEE---EEecCCCcc--cccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVR---VLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~---~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+-||.|.||.|.||+.|.- |++.+..|. .++-...+. ..+..... ......+.-.+.+.++++++|+|+--|
T Consensus 28 ~~KVAvlGAaGGIGQPLSL-LlK~np~Vs~LaLYDi~~~~GVaaDlSHI~T--~s~V~g~~g~~~L~~al~~advVvIPA 104 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSL-LLKLNPLVSELALYDIANTPGVAADLSHINT--NSSVVGFTGADGLENALKGADVVVIPA 104 (345)
T ss_pred cceEEEEecCCccCccHHH-HHhcCcccceeeeeecccCCcccccccccCC--CCceeccCChhHHHHHhcCCCEEEecC
Confidence 3489999999999999975 445555443 333332211 11111000 011123335679999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
|.+. -.....++++++|..-.+.+..++.+.+.+. .+.++|
T Consensus 105 GVPR---KPGMTRDDLFn~NAgIv~~l~~aia~~cP~A-~i~vIs 145 (345)
T KOG1494|consen 105 GVPR---KPGMTRDDLFNINAGIVKTLAAAIAKCCPNA-LILVIS 145 (345)
T ss_pred CCCC---CCCCcHHHhhhcchHHHHHHHHHHHhhCccc-eeEeec
Confidence 9863 2344567999999999999999999864432 344444
|
|
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00036 Score=58.94 Aligned_cols=102 Identities=13% Similarity=0.164 Sum_probs=71.7
Q ss_pred EEEECCCchHHHHHHHHHHhCC----CeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|.|+||+|.+|..++..|+..| .+|.++++++++....... .... ....++.-.+++.+.++++|+||.+++
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~-~~~~~i~~~~d~~~~~~~aDiVv~t~~ 79 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEP-LADIKVSITDDPYEAFKDADVVIITAG 79 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhhhh-ccCcEEEECCchHHHhCCCCEEEECCC
Confidence 5799999999999999999888 6999999877553332111 0000 012344434556778899999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ...........|+...+.+.+.+++.
T Consensus 80 ~~~~---~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 80 VGRK---PGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred CCCC---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6522 22345566778999999999999884
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00017 Score=63.82 Aligned_cols=102 Identities=13% Similarity=0.128 Sum_probs=68.0
Q ss_pred cCCeEEEECC----------------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchh-H
Q 020476 19 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-R 81 (325)
Q Consensus 19 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~-~ 81 (325)
..++|+|||| ||.+|.+++++|..+|++|+++.++..... .. . ...+|+.+.+++ .
T Consensus 184 ~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~~--~~-~----~~~~~v~~~~~~~~ 256 (390)
T TIGR00521 184 EGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLLT--PP-G----VKSIKVSTAEEMLE 256 (390)
T ss_pred CCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccCC--CC-C----cEEEEeccHHHHHH
Confidence 4579999999 478999999999999999999987664321 11 0 234777777776 4
Q ss_pred hhh----CCCCEEEECCCCCCCCCCChh---hH--HHHHHHhhHHHHHHHHHHhc
Q 020476 82 DCI----QGSTAVVNLAGTPIGTRWSSE---IK--KEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 82 ~~~----~~~d~vi~~a~~~~~~~~~~~---~~--~~~~~~nv~~~~~ll~~~~~ 127 (325)
+++ .++|++|++||.......... .. ...+..|+..+-.++..+++
T Consensus 257 ~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~ 311 (390)
T TIGR00521 257 AALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRK 311 (390)
T ss_pred HHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHh
Confidence 333 368999999997532111100 00 11233566777788888776
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00035 Score=62.88 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=36.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 60 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 60 (325)
+|||.|+| .|++|..++..|++.|++|+++++++++...+
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l 42 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI 42 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 47999999 69999999999999999999999988776654
|
|
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.61 E-value=4.9e-05 Score=60.29 Aligned_cols=76 Identities=25% Similarity=0.386 Sum_probs=44.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| .||+|..++..|++.||+|++++.+++....+........-++ ..+.-.+++.++++++|+
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~~g~~p~~E~~l~~ll~~~~~~~~l~~t~~~~~ai~~adv 79 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALNNGELPIYEPGLDELLKENVSAGRLRATTDIEEAIKDADV 79 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHHTTSSSS-CTTHHHHHHHHHHTTSEEEESEHHHHHHH-SE
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHhhccccccccchhhhhccccccccchhhhhhhhhhhccce
Confidence 7999998 8999999999999999999999998876544433211000011 122223455566778999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
+|-|.+-+
T Consensus 80 ~~I~VpTP 87 (185)
T PF03721_consen 80 VFICVPTP 87 (185)
T ss_dssp EEE----E
T ss_pred EEEecCCC
Confidence 99998754
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00086 Score=58.17 Aligned_cols=104 Identities=16% Similarity=0.153 Sum_probs=70.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+||.|+|| |.+|..++..|+..| .++..++++++....... ...........+....+++ .++++|+||.+++
T Consensus 5 ~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~~~d~~-~l~~ADiVVitag 82 (319)
T PTZ00117 5 RKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILGTNNYE-DIKDSDVVVITAG 82 (319)
T ss_pred CcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEeCCCHH-HhCCCCEEEECCC
Confidence 469999997 999999999998888 689999997754322110 0000001112333334555 6799999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ......+....|..-.+.+.+.+.+.
T Consensus 83 ~~~~---~g~~r~dll~~n~~i~~~i~~~i~~~ 112 (319)
T PTZ00117 83 VQRK---EEMTREDLLTINGKIMKSVAESVKKY 112 (319)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 6422 23345677788999899999999884
|
|
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00064 Score=58.62 Aligned_cols=104 Identities=13% Similarity=0.198 Sum_probs=70.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCC-CCCcc-ccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP-GKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~~~-~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+||.|+|+ |.+|..++..|+..| .++..++++++....... ..... ......+....+.+ .++++|+||.+||
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~v~~~~dy~-~~~~adivvitaG 80 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPKIEADKDYS-VTANSKVVIVTAG 80 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCEEEECCCHH-HhCCCCEEEECCC
Confidence 469999996 999999999998876 479999987654322111 00000 01111333333444 4789999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ...+..+....|+.-.+.+.+.+++.
T Consensus 81 ~~~k---~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 81 ARQN---EGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 7522 23456788889999999999999984
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00039 Score=62.70 Aligned_cols=76 Identities=24% Similarity=0.426 Sum_probs=52.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| .|++|..++..|++.||+|+++++++++...+.........++ ..+.-.++..++++++|+
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~~g~~~~~e~~l~~~~~~~~~~g~l~~~~~~~~~~~~adv 79 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLNKGKSPIYEPGLDELLAKALAAGRLRATTDYEDAIRDADV 79 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhhcCCCCCCCCCHHHHHHHhhhcCCeEEECCHHHHHhhCCE
Confidence 5899999 7999999999999999999999998876654432110000000 011222345566789999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
||-|.+.+
T Consensus 80 vii~vpt~ 87 (411)
T TIGR03026 80 IIICVPTP 87 (411)
T ss_pred EEEEeCCC
Confidence 99998754
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00066 Score=59.30 Aligned_cols=69 Identities=20% Similarity=0.320 Sum_probs=41.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe---EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+||.|+||||++|..|++.|.+++|. +..+....+..+..... .....+.+.+ .+.++++|+||.+++
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~~~~-----~~~~~v~~~~--~~~~~~~D~vf~a~p 78 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKVTFE-----GRDYTVEELT--EDSFDGVDIALFSAG 78 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCeeeec-----CceeEEEeCC--HHHHcCCCEEEECCC
Confidence 469999999999999999999988773 44443322222221111 0011111221 133478999999886
|
|
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.001 Score=58.19 Aligned_cols=103 Identities=17% Similarity=0.270 Sum_probs=70.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCC-CCc-cccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPG-KKT-RFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~-~~~-~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+||.|+|+ |.+|+.++-.|+..+. ++..++.+++........ ... .......+....... .++++|+||-+||.
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~i~~~~dy~-~~~daDiVVitAG~ 115 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAAAFLPRTKILASTDYA-VTAGSDLCIVTAGA 115 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCEEEeCCCHH-HhCCCCEEEECCCC
Confidence 59999996 9999999999988763 799999877543221110 000 001113443322343 47899999999997
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.. ...+..+....|+.-.+.+.+.+++.
T Consensus 116 ~~k---~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 116 RQI---PGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred CCC---cCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 522 23356788889999999999999884
|
|
| >COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0011 Score=54.49 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=44.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEE-EEecCCCccccc-CCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVR-VLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~-~~~r~~~~~~~~-~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+||||.|.|++|-.|+.+++.+.+.+ .++. ++.|.++..... ..........++.+.+. +.....++|++|.+..
T Consensus 1 ~~iki~V~Ga~GRMG~~ii~~v~~~~~~~L~aa~~~~~~~~~g~d~ge~~g~~~~gv~v~~~--~~~~~~~~DV~IDFT~ 78 (266)
T COG0289 1 SMIKVAVAGASGRMGRTLIRAVLEAPDLELVAAFDRPGSLSLGSDAGELAGLGLLGVPVTDD--LLLVKADADVLIDFTT 78 (266)
T ss_pred CCceEEEEcCCChHHHHHHHHHhcCCCceEEEEEecCCccccccchhhhccccccCceeecc--hhhcccCCCEEEECCC
Confidence 46899999999999999999998875 4544 455654322110 00000000111222222 4444568999999865
|
|
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00032 Score=60.02 Aligned_cols=76 Identities=14% Similarity=0.126 Sum_probs=53.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCC---CcccccCCCC----CccccCceeecCCchhHhhhCCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSR---SKAELIFPGK----KTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~---~~~~~~~~~~----~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
.++++|+|| |.+|++++..|++.|.+ |+++.|+. ++...+.... .......+|+.+.+.+.+.++.+|+||
T Consensus 126 ~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~DilI 204 (289)
T PRK12548 126 GKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDILV 204 (289)
T ss_pred CCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEEE
Confidence 468999998 89999999999999985 99999986 3332221110 000122345656667777778899999
Q ss_pred ECCCC
Q 020476 92 NLAGT 96 (325)
Q Consensus 92 ~~a~~ 96 (325)
|+...
T Consensus 205 NaTp~ 209 (289)
T PRK12548 205 NATLV 209 (289)
T ss_pred EeCCC
Confidence 99864
|
|
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00062 Score=61.03 Aligned_cols=102 Identities=18% Similarity=0.237 Sum_probs=71.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-------CC--eEEEEecCCCcccccCCCCCc---cccCceeecCCchhHhhhCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-------NH--QVRVLTRSRSKAELIFPGKKT---RFFPGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-------g~--~V~~~~r~~~~~~~~~~~~~~---~~~~~~d~~d~~~~~~~~~~~d 88 (325)
-||.|+|++|++|.+++-.|+.. +. ++..++++.+........... .....+.+.. +. .+.++++|
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~~v~i~~-~~-ye~~kdaD 178 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLREVSIGI-DP-YEVFQDAE 178 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcCceEEec-CC-HHHhCcCC
Confidence 48999999999999999999887 53 788888887664332211000 0011122222 22 36678999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+||..||.+.. ...+..+..+.|+.-.+.+.+.+.+
T Consensus 179 iVVitAG~prk---pG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 179 WALLIGAKPRG---PGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred EEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999997522 2345778889999999999999988
|
|
| >COG0240 GpsA Glycerol-3-phosphate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00087 Score=57.13 Aligned_cols=75 Identities=21% Similarity=0.416 Sum_probs=54.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCce----eecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGV----MIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~----d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+|+|.|+| +|-.|.+|+..|.+.||+|+...|+++............ ..+++ ++.-..++.++++++|+|+...
T Consensus 1 ~~kI~ViG-aGswGTALA~~la~ng~~V~lw~r~~~~~~~i~~~~~N~~yLp~i~lp~~l~at~Dl~~a~~~ad~iv~av 79 (329)
T COG0240 1 MMKIAVIG-AGSWGTALAKVLARNGHEVRLWGRDEEIVAEINETRENPKYLPGILLPPNLKATTDLAEALDGADIIVIAV 79 (329)
T ss_pred CceEEEEc-CChHHHHHHHHHHhcCCeeEEEecCHHHHHHHHhcCcCccccCCccCCcccccccCHHHHHhcCCEEEEEC
Confidence 47999999 599999999999999999999999876554443321111 12222 2334567888899999999875
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 80 P 80 (329)
T COG0240 80 P 80 (329)
T ss_pred C
Confidence 3
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0011 Score=56.84 Aligned_cols=58 Identities=14% Similarity=0.249 Sum_probs=41.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||+||.|+||||++|..|++.|.++.+ ++..+..+..+ ++ ....+.++++|+||.+..
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~~~~----------------~~---~~~~~~~~~~DvvFlalp 59 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEAKRK----------------DA---AARRELLNAADVAILCLP 59 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecCCCC----------------cc---cCchhhhcCCCEEEECCC
Confidence 467999999999999999999988864 66666544322 11 112234568999998874
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00032 Score=69.13 Aligned_cols=76 Identities=16% Similarity=0.127 Sum_probs=55.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-Ce-------------EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQ-------------VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~-------------V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~ 85 (325)
+++|+|+|+ |++|+.+++.|.+.. .+ |++.+++......+...........+|+.|.+++.++++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~ 647 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS 647 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence 568999996 999999999998753 33 777777765554433221111134678889999999889
Q ss_pred CCCEEEECCCC
Q 020476 86 GSTAVVNLAGT 96 (325)
Q Consensus 86 ~~d~vi~~a~~ 96 (325)
++|+||+|...
T Consensus 648 ~~DaVIsalP~ 658 (1042)
T PLN02819 648 QVDVVISLLPA 658 (1042)
T ss_pred CCCEEEECCCc
Confidence 99999999864
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00033 Score=55.33 Aligned_cols=63 Identities=13% Similarity=0.239 Sum_probs=38.0
Q ss_pred CCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh----hCCCCEEEECCCCC
Q 020476 28 ATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC----IQGSTAVVNLAGTP 97 (325)
Q Consensus 28 atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~----~~~~d~vi~~a~~~ 97 (325)
.||..|.+|++++..+|++|+.+.....- .. ... ...+++...+++.+. +++.|++||+|+..
T Consensus 27 SSG~~G~~lA~~~~~~Ga~V~li~g~~~~-~~-p~~-----~~~i~v~sa~em~~~~~~~~~~~Di~I~aAAVs 93 (185)
T PF04127_consen 27 SSGKMGAALAEEAARRGAEVTLIHGPSSL-PP-PPG-----VKVIRVESAEEMLEAVKELLPSADIIIMAAAVS 93 (185)
T ss_dssp --SHHHHHHHHHHHHTT-EEEEEE-TTS------TT-----EEEEE-SSHHHHHHHHHHHGGGGSEEEE-SB--
T ss_pred CcCHHHHHHHHHHHHCCCEEEEEecCccc-cc-ccc-----ceEEEecchhhhhhhhccccCcceeEEEecchh
Confidence 38999999999999999999999987421 11 110 223455555555443 45789999999974
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.00073 Score=59.02 Aligned_cols=75 Identities=19% Similarity=0.346 Sum_probs=49.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcccc-Cce----eecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF-PGV----MIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~----d~~d~~~~~~~~~~~d~vi~~a 94 (325)
||||.|+| .|.+|..++..|++.|++|++++|++............... ... .+.-.++..+.++++|+||-+.
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENPRYLPGIKLPDNLRATTDLAEALADADLILVAV 79 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccCCCCcCCCCeEEeCCHHHHHhCCCEEEEeC
Confidence 57999999 59999999999999999999999986554333221100000 000 1112234555678899999886
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 80 ~ 80 (325)
T PRK00094 80 P 80 (325)
T ss_pred C
Confidence 4
|
|
| >PRK07417 arogenate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00067 Score=57.80 Aligned_cols=66 Identities=23% Similarity=0.257 Sum_probs=47.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+| .|.+|..++..|.+.|++|++++|++........... ++.... .. +.++++|+||-|..
T Consensus 1 m~I~IIG-~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~------~~~~~~-~~-~~~~~aDlVilavp 66 (279)
T PRK07417 1 MKIGIVG-LGLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGL------VDEAST-DL-SLLKDCDLVILALP 66 (279)
T ss_pred CeEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCC------cccccC-CH-hHhcCCCEEEEcCC
Confidence 5899999 7999999999999999999999998765443322211 111111 12 35678999999864
|
|
| >COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.002 Score=55.05 Aligned_cols=26 Identities=35% Similarity=0.618 Sum_probs=23.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH 45 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~ 45 (325)
++||.|.||||.+|+.+++.|.++.+
T Consensus 1 ~~~VavvGATG~VG~~~~~~L~e~~f 26 (334)
T COG0136 1 KLNVAVLGATGAVGQVLLELLEERHF 26 (334)
T ss_pred CcEEEEEeccchHHHHHHHHHHhcCC
Confidence 46999999999999999999998753
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0016 Score=55.99 Aligned_cols=103 Identities=15% Similarity=0.177 Sum_probs=68.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCC-CCCcccc---CceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFP-GKKTRFF---PGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~-~~~~~~~---~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+|+ |++|+.++..|+.++. ++..++..++....... ......+ ..+.+.. .. .+.++++|+||.+||
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~i~~-~~-y~~~~~aDivvitaG 77 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTKIRA-GD-YDDCADADIIVITAG 77 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEEEEE-CC-HHHhCCCCEEEECCC
Confidence 6899997 9999999999988874 79999987654322111 0000001 1233332 22 356799999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.....+ .+..+.+..|+.-.+.+.+.+.+.
T Consensus 78 ~~~kpg~t-r~R~dll~~N~~I~~~i~~~i~~~ 109 (307)
T cd05290 78 PSIDPGNT-DDRLDLAQTNAKIIREIMGNITKV 109 (307)
T ss_pred CCCCCCCC-chHHHHHHHHHHHHHHHHHHHHHh
Confidence 75221111 014788889999999999999984
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00089 Score=61.03 Aligned_cols=77 Identities=14% Similarity=0.217 Sum_probs=52.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCcee----------ecCCchhHhhhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVM----------IAEEPQWRDCIQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d----------~~d~~~~~~~~~~~ 87 (325)
||+|.|+| .|++|..++..|++.| ++|++++.++.+...+.........++++ +.-.+++.++++++
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~~~~e~gl~ell~~~~~~~l~~t~~~~~~i~~a 79 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQLPIYEPGLDEVVKQCRGKNLFFSTDVEKHVAEA 79 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCCccCCCCHHHHHHHhhcCCEEEEcCHHHHHhcC
Confidence 57999998 7999999999999884 78999999887766544322100000110 11123345567889
Q ss_pred CEEEECCCCC
Q 020476 88 TAVVNLAGTP 97 (325)
Q Consensus 88 d~vi~~a~~~ 97 (325)
|++|-|.+-+
T Consensus 80 dvi~I~V~TP 89 (473)
T PLN02353 80 DIVFVSVNTP 89 (473)
T ss_pred CEEEEEeCCC
Confidence 9999998755
|
|
| >PF08338 DUF1731: Domain of unknown function (DUF1731); InterPro: IPR013549 This domain of unknown function appears towards the C terminus of proteins of the NAD dependent epimerase/dehydratase family (IPR001509 from INTERPRO) in bacteria, eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00012 Score=43.67 Aligned_cols=47 Identities=45% Similarity=0.773 Sum_probs=24.7
Q ss_pred cHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 278 PEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
|.+..+...|+.......++++.+.|+.+.||+++|+++++++++++
T Consensus 2 P~~~lkl~lGe~a~lll~~q~v~P~kL~~~GF~F~~p~l~~AL~~ll 48 (48)
T PF08338_consen 2 PAFALKLLLGEMAELLLASQRVSPKKLLEAGFQFRYPTLEEALRDLL 48 (48)
T ss_dssp ------------GGGGG-EEEE--HHHHHTT---S-SSHHHHHHH--
T ss_pred CHHHHHHHHHHHHHHHhCCCeecChHHHHCCCcccCCCHHHHHhccC
Confidence 56666777788888899999999999999999999999999999864
|
Many of the proteins in which it is found are involved in cell-division inhibition. ; PDB: 3OH8_A. |
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00047 Score=63.10 Aligned_cols=75 Identities=19% Similarity=0.146 Sum_probs=48.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+++ +|..+++.|++.|++|++.+++... ......... ..++++...+...+...++|+||++++..
T Consensus 4 ~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 4 KGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELG---ELGIELVLGEYPEEFLEGVDLVVVSPGVP 79 (450)
T ss_pred CCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH---hcCCEEEeCCcchhHhhcCCEEEECCCCC
Confidence 357999999877 9999999999999999999987522 111000000 01123332222224456899999999863
|
|
| >PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.002 Score=55.72 Aligned_cols=54 Identities=22% Similarity=0.367 Sum_probs=44.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..|||.|+| +|.+|+.+++.|.+.||+|++.+|+.. +.+.++++++|+||-+..
T Consensus 3 ~~m~I~iiG-~G~~G~~lA~~l~~~G~~V~~~~r~~~----------------------~~~~~~~~~advvi~~vp 56 (308)
T PRK14619 3 QPKTIAILG-AGAWGSTLAGLASANGHRVRVWSRRSG----------------------LSLAAVLADADVIVSAVS 56 (308)
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCEEEEEeCCCC----------------------CCHHHHHhcCCEEEEECC
Confidence 357999999 699999999999999999999998752 234566778999998864
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0032 Score=54.62 Aligned_cols=114 Identities=13% Similarity=0.123 Sum_probs=72.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+||.|+| .|.+|..++..++..|. +|.+++++++...... .... .......+.-..++ +.++++|+||.+++
T Consensus 7 ~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~~~-~~~~~~~I~~~~d~-~~l~~aDiVI~tag 83 (321)
T PTZ00082 7 RKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHSNV-IAGSNSKVIGTNNY-EDIAGSDVVIVTAG 83 (321)
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhhhh-ccCCCeEEEECCCH-HHhCCCCEEEECCC
Confidence 5899999 59999999999988885 8999999887432110 0000 00011233322344 46799999999998
Q ss_pred CCCCCCC--ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-CEEEEe
Q 020476 96 TPIGTRW--SSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVS 139 (325)
Q Consensus 96 ~~~~~~~--~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~~v~~S 139 (325)
.+..... .+.+..+....|+...+.+++.+.+. ..+ .++.+|
T Consensus 84 ~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~--~p~a~~iv~s 128 (321)
T PTZ00082 84 LTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY--CPNAFVIVIT 128 (321)
T ss_pred CCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH--CCCeEEEEec
Confidence 7532111 00145667778999999999999884 323 454444
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0018 Score=56.18 Aligned_cols=70 Identities=20% Similarity=0.299 Sum_probs=44.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++|.|+||||++|..+++.|.++.| ++..+....+..+..... .....+.+.+.+ .+.++|+||.+++
T Consensus 3 ~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~~~-----~~~~~v~~~~~~--~~~~~Dvvf~a~p 75 (336)
T PRK08040 3 EGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLRFG-----GKSVTVQDAAEF--DWSQAQLAFFVAG 75 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEEEC-----CcceEEEeCchh--hccCCCEEEECCC
Confidence 346999999999999999999998644 666665543333332211 111222233221 2368999999985
|
|
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00086 Score=59.17 Aligned_cols=115 Identities=16% Similarity=0.221 Sum_probs=71.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-e----EEE--E--ecCCCcccccCCCC-Cc--cccCceeecCCchhHhhhCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-Q----VRV--L--TRSRSKAELIFPGK-KT--RFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~----V~~--~--~r~~~~~~~~~~~~-~~--~~~~~~d~~d~~~~~~~~~~~ 87 (325)
.-||.|+||+|.+|.+++-.|+..+. . |.. + +++.+......... .. .....+.+.. +. .+.++++
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~i~~-~~-y~~~kda 121 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVSIGI-DP-YEVFEDA 121 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceEEec-CC-HHHhCCC
Confidence 34999999999999999999988763 2 333 3 55554432211100 00 0011222222 22 3667899
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
|+||.+||.+.. ...+..+....|+...+.+...+.++......++.+|
T Consensus 122 DIVVitAG~prk---pg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVs 170 (387)
T TIGR01757 122 DWALLIGAKPRG---PGMERADLLDINGQIFADQGKALNAVASKNCKVLVVG 170 (387)
T ss_pred CEEEECCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcC
Confidence 999999997522 2345778889999999999999988421233344444
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0029 Score=55.26 Aligned_cols=104 Identities=13% Similarity=0.175 Sum_probs=63.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC--------------------ccccCceee--
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK--------------------TRFFPGVMI-- 74 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~d~-- 74 (325)
....+|+|+|+ |.+|+++++.|++.|. ++++++++.-....+..... ....+.+++
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~ 100 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEA 100 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEE
Confidence 34568999996 9999999999999997 89999886422111111000 000011111
Q ss_pred c----CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 75 A----EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 75 ~----d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
. +.+.+.++++++|+||.+.. |...-..+-++|.+ .+ .++|+.++.+.
T Consensus 101 ~~~~~~~~~~~~~~~~~DlVid~~D------------------n~~~r~~ln~~~~~--~~-iP~i~~~~~g~ 152 (339)
T PRK07688 101 IVQDVTAEELEELVTGVDLIIDATD------------------NFETRFIVNDAAQK--YG-IPWIYGACVGS 152 (339)
T ss_pred EeccCCHHHHHHHHcCCCEEEEcCC------------------CHHHHHHHHHHHHH--hC-CCEEEEeeeee
Confidence 1 34456677888999998853 12223345677877 44 57888776654
|
|
| >PRK11880 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00081 Score=56.97 Aligned_cols=68 Identities=19% Similarity=0.191 Sum_probs=48.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||+|.|+| .|.+|..+++.|.+.| ++|.+++|++++........ ++.+. +...++++++|+||-+.-
T Consensus 1 ~mm~I~iIG-~G~mG~~la~~l~~~g~~~~~v~v~~r~~~~~~~~~~~~------g~~~~--~~~~~~~~~advVil~v~ 71 (267)
T PRK11880 1 MMKKIGFIG-GGNMASAIIGGLLASGVPAKDIIVSDPSPEKRAALAEEY------GVRAA--TDNQEAAQEADVVVLAVK 71 (267)
T ss_pred CCCEEEEEe-chHHHHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhc------CCeec--CChHHHHhcCCEEEEEcC
Confidence 478999999 5999999999999988 78999999876544332211 12222 234455678999998753
|
|
| >PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.0027 Score=55.65 Aligned_cols=70 Identities=14% Similarity=0.181 Sum_probs=40.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHh-CCCe---EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|++|.|+||||++|+.+++.|++ +.+. ++.++.+. .......- . .....+.+..+. +.++++|+||.+++
T Consensus 1 m~~VAIVGATG~vG~ell~llL~~~~f~~~~l~~~ss~~-sg~~~~~f-~---g~~~~v~~~~~~-~~~~~~Divf~a~~ 74 (369)
T PRK06598 1 MKKVGFVGWRGMVGSVLMQRMVEENDFDLIEPVFFSTSQ-AGGAAPSF-G---GKEGTLQDAFDI-DALKKLDIIITCQG 74 (369)
T ss_pred CeEEEEEeCCCHHHHHHHHHHHhCCCCCcCcEEEecchh-hCCccccc-C---CCcceEEecCCh-hHhcCCCEEEECCC
Confidence 47999999999999999985555 4555 66655432 22211110 0 000111121111 22468999999986
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0021 Score=57.04 Aligned_cols=55 Identities=22% Similarity=0.301 Sum_probs=44.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+++|.|+||.|.+|..+++.|.+.|++|++++|+.. +...++++++|+||-|..
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~~----------------------~~~~~~~~~aDlVilavP 151 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDDW----------------------DRAEDILADAGMVIVSVP 151 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCcc----------------------hhHHHHHhcCCEEEEeCc
Confidence 4479999999999999999999999999999998531 123455678899998874
|
|
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0038 Score=46.87 Aligned_cols=101 Identities=12% Similarity=0.215 Sum_probs=60.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC------------------ccccCceeec------
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK------------------TRFFPGVMIA------ 75 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~d~~------ 75 (325)
.||+|+| .|-+|+.+++.|...|. +++.++.+.=....+..... ....+.+++.
T Consensus 3 ~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~ 81 (135)
T PF00899_consen 3 KRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI 81 (135)
T ss_dssp -EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred CEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence 5899999 59999999999999997 78888875432222222100 0001111111
Q ss_pred CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 76 d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
+.+...++++++|+||.|... ......+.+.|++ .+ .++|+.++.+.
T Consensus 82 ~~~~~~~~~~~~d~vi~~~d~------------------~~~~~~l~~~~~~--~~-~p~i~~~~~g~ 128 (135)
T PF00899_consen 82 DEENIEELLKDYDIVIDCVDS------------------LAARLLLNEICRE--YG-IPFIDAGVNGF 128 (135)
T ss_dssp SHHHHHHHHHTSSEEEEESSS------------------HHHHHHHHHHHHH--TT--EEEEEEEETT
T ss_pred ccccccccccCCCEEEEecCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeecC
Confidence 334566777899999998541 2233356678887 44 46666665543
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating) | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00099 Score=57.34 Aligned_cols=68 Identities=15% Similarity=0.244 Sum_probs=49.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+| .|.+|..+++.|++.|++|.+++|++++......... ....+.+.+.+.++++|+|+-+..
T Consensus 1 M~Ig~IG-lG~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~------~~~~s~~~~~~~~~~~dvIi~~vp 68 (298)
T TIGR00872 1 MQLGLIG-LGRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRT------TGVANLRELSQRLSAPRVVWVMVP 68 (298)
T ss_pred CEEEEEc-chHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCC------cccCCHHHHHhhcCCCCEEEEEcC
Confidence 5899999 6999999999999999999999998876554443211 111234444455567899998864
|
This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.00041 Score=53.47 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=50.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |.+|..+++.|.+.| ++|++++|+.++........... ....+ .....+.++++|+||.+....
T Consensus 18 ~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~Dvvi~~~~~~ 92 (155)
T cd01065 18 KGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL-GIAIA---YLDLEELLAEADLIINTTPVG 92 (155)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-cccee---ecchhhccccCCEEEeCcCCC
Confidence 3579999996 999999999999986 78999999876544332211000 00112 223445578999999998754
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00033 Score=64.17 Aligned_cols=73 Identities=15% Similarity=0.217 Sum_probs=55.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|+|+|+|+ |.+|+++++.|.+.|++|++++++++.......... .....+|..+.+.+.++ ++++|.||-+..
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~~~-~~~~~gd~~~~~~l~~~~~~~a~~vi~~~~ 74 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDRLD-VRTVVGNGSSPDVLREAGAEDADLLIAVTD 74 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhhcC-EEEEEeCCCCHHHHHHcCCCcCCEEEEecC
Confidence 68999996 999999999999999999999998876554332110 01334577777788777 788999998864
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.00086 Score=57.25 Aligned_cols=73 Identities=12% Similarity=0.186 Sum_probs=45.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccC-ceee----cCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFP-GVMI----AEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~-~~d~----~d~~~~~~~~~~~d~vi~ 92 (325)
+|+||.|.||+||-|..|++.|+.+. .++..++.+....+........ .. ..|+ .|++.+ ..+++|+||-
T Consensus 1 ~~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~p~--l~g~~~l~~~~~~~~~~--~~~~~DvvFl 76 (349)
T COG0002 1 MMIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVHPN--LRGLVDLPFQTIDPEKI--ELDECDVVFL 76 (349)
T ss_pred CCceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhCcc--cccccccccccCChhhh--hcccCCEEEE
Confidence 46899999999999999999999885 3666666554333332221000 00 0111 133333 3457999999
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
|..
T Consensus 77 alP 79 (349)
T COG0002 77 ALP 79 (349)
T ss_pred ecC
Confidence 864
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0031 Score=54.28 Aligned_cols=101 Identities=16% Similarity=0.176 Sum_probs=68.2
Q ss_pred EEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCcccc--CceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~--~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
|.|+|+ |++|..++..|+..| .++++++++.+.............. ....+...+.. +.++++|+||.++|.+.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~i~~~~~~-~~l~~aDiVIitag~p~ 78 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHASAFLATGTIVRGGDY-ADAADADIVVITAGAPR 78 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCeEEECCCH-HHhCCCCEEEEcCCCCC
Confidence 578895 899999999999888 6899999987654332211100000 11122211223 57889999999999753
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
. ...+..+....|+...+.+.+.+++.
T Consensus 79 ~---~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 79 K---PGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred C---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 23345677789999999999999984
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.00043 Score=59.59 Aligned_cols=67 Identities=13% Similarity=0.272 Sum_probs=49.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|+|.|+| .|.+|..+++.|++.|++|++++|++.+....... ++. -.+...++++++|+||-+..
T Consensus 1 ~~~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~-------g~~--~~~~~~e~~~~~d~vi~~vp 67 (296)
T PRK11559 1 MTMKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIAA-------GAE--TASTAKAVAEQCDVIITMLP 67 (296)
T ss_pred CCceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCe--ecCCHHHHHhcCCEEEEeCC
Confidence 357999999 69999999999999999999999987654432221 111 12345566788999998864
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0027 Score=56.59 Aligned_cols=75 Identities=16% Similarity=0.207 Sum_probs=49.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcccc---------CceeecCCchhHhhhCCCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF---------PGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~d~~d~~~~~~~~~~~d~vi 91 (325)
|||.|+| .|++|..++..|+ .||+|+++++++++...+........- ....+....+..++.+++|+||
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~g~~~~~e~~l~~~l~~~~~~l~~t~~~~~~~~~ad~vi 78 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLNDRISPIVDKEIQQFLQSDKIHFNATLDKNEAYRDADYVI 78 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHcCCCCCCCcCHHHHHHhCCCcEEEecchhhhhcCCCEEE
Confidence 5899998 7999999997666 599999999998776554432110000 0122222233445568899999
Q ss_pred ECCCCC
Q 020476 92 NLAGTP 97 (325)
Q Consensus 92 ~~a~~~ 97 (325)
-|.+.+
T Consensus 79 i~Vpt~ 84 (388)
T PRK15057 79 IATPTD 84 (388)
T ss_pred EeCCCC
Confidence 997643
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0016 Score=56.31 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=49.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCCccccCceeecCCchhHhhhCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~d~~~~~~~~~~~d 88 (325)
.++|.|+| +|-+|+.++..|+..|++|++++++++....... ...........+.-.+++.++++++|
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~l~~av~~aD 85 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANAWPALERQGLAPGASPARLRFVATIEACVADAD 85 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCChhhHHhhceecCCHHHHhcCCC
Confidence 35899999 5999999999999999999999998754322110 00000000001112235777889999
Q ss_pred EEEECCC
Q 020476 89 AVVNLAG 95 (325)
Q Consensus 89 ~vi~~a~ 95 (325)
.|+-++.
T Consensus 86 lViEavp 92 (321)
T PRK07066 86 FIQESAP 92 (321)
T ss_pred EEEECCc
Confidence 9999874
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00027 Score=49.64 Aligned_cols=66 Identities=23% Similarity=0.309 Sum_probs=47.5
Q ss_pred eEEEECCCchHHHHHHHHHHhCC---CeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN---HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g---~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+| +|.+|.+|++.|++.| ++|... .|++++...+.... . +.... ....++++.+|+||-+.-
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~-----~-~~~~~-~~~~~~~~~advvilav~ 70 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY-----G-VQATA-DDNEEAAQEADVVILAVK 70 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC-----T-TEEES-EEHHHHHHHTSEEEE-S-
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh-----c-ccccc-CChHHhhccCCEEEEEEC
Confidence 688997 7999999999999999 899955 88887765544321 1 22222 245667779999999864
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00068 Score=57.79 Aligned_cols=69 Identities=20% Similarity=0.153 Sum_probs=51.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++++|+|. |.+|+.+++.|...|.+|++.+|++++....... +....+.+.+.+.++++|+||++..
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEM-------GLIPFPLNKLEEKVAEIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------CCeeecHHHHHHHhccCCEEEECCC
Confidence 3569999995 9999999999999999999999987543222111 1223344567778889999999864
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.00039 Score=53.74 Aligned_cols=73 Identities=19% Similarity=0.411 Sum_probs=47.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCce----eecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+| +|..|.+++..|.++|++|+..+|+++..+.+...... ...+.. .+.=.+++.++++++|+|+-+..
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i~~t~dl~~a~~~ad~IiiavP 78 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENIKATTDLEEALEDADIIIIAVP 78 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTEEEESSHHHHHTT-SEEEE-S-
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCcccccccCHHHHhCcccEEEeccc
Confidence 689999 59999999999999999999999987543322211100 001111 11123567788899999998753
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.00062 Score=50.13 Aligned_cols=68 Identities=21% Similarity=0.262 Sum_probs=41.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEe-cCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..+||-|+|+ |.+|.+|.+.|.+.||.|..+. |+..+....... ....... .+.++++++|++|-+..
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~-----~~~~~~~---~~~~~~~~aDlv~iavp 77 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAF-----IGAGAIL---DLEEILRDADLVFIAVP 77 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC-------TT--------TTGGGCC-SEEEE-S-
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCcccccccccc-----ccccccc---ccccccccCCEEEEEec
Confidence 4579999995 9999999999999999998874 555443332221 1222222 34456778999998864
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.00059 Score=55.90 Aligned_cols=74 Identities=20% Similarity=0.221 Sum_probs=49.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCce--eecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGV--MIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~--d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+||+|.+|+.+++.|.+.|++|++.+|++++........... ...++ .+.. ....++++++|+||-+..
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~~~~~~~~~g~~~~~~~-~~~~ea~~~aDvVilavp 77 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAKALEELGHGGSDIKVTG-ADNAEAAKRADVVILAVP 77 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHHHHhhccccCCCceEEE-eChHHHHhcCCEEEEECC
Confidence 68999999999999999999999999999999876543322110000 00011 1111 123456778999998864
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0046 Score=54.28 Aligned_cols=34 Identities=32% Similarity=0.549 Sum_probs=28.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR 54 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~ 54 (325)
|||.|+|++|++|++|++.|.+++ .++..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 589999999999999999998876 5888885443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0062 Score=49.15 Aligned_cols=104 Identities=10% Similarity=0.103 Sum_probs=62.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC------------------CccccCceeec---
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK------------------KTRFFPGVMIA--- 75 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~------------------~~~~~~~~d~~--- 75 (325)
....+|+|+| .|-+|+++++.|...|. ++++++++.-....+.... .....+.+++.
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~i~~~~ 97 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLRELNSDIQVTALK 97 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHhCCCCEEEEeh
Confidence 3445899999 69999999999999996 8999887632111111000 00001111211
Q ss_pred ---CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 76 ---EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 76 ---d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
+.+.+.+.++++|+||.+... ...-..+-+.|++ .+ .++|+.++.+.
T Consensus 98 ~~i~~~~~~~~~~~~D~Vi~~~d~------------------~~~r~~l~~~~~~--~~-ip~i~~~~~g~ 147 (202)
T TIGR02356 98 ERVTAENLELLINNVDLVLDCTDN------------------FATRYLINDACVA--LG-TPLISAAVVGF 147 (202)
T ss_pred hcCCHHHHHHHHhCCCEEEECCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeccC
Confidence 334566778899999998631 2222345677777 44 56777765543
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0034 Score=54.62 Aligned_cols=70 Identities=24% Similarity=0.376 Sum_probs=43.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh-CCCe---EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA-DNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
..+||.|+||||++|+.+++.|.+ ..++ +..+....+..+...-. .....+.+.+. ..++++|+||.++
T Consensus 4 ~~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~~~~-----~~~l~v~~~~~--~~~~~~Divf~a~ 76 (347)
T PRK06728 4 KGYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTVQFK-----GREIIIQEAKI--NSFEGVDIAFFSA 76 (347)
T ss_pred CCCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCeeeC-----CcceEEEeCCH--HHhcCCCEEEECC
Confidence 346999999999999999999985 5566 55565443333322111 01122222221 2236899999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
+
T Consensus 77 ~ 77 (347)
T PRK06728 77 G 77 (347)
T ss_pred C
Confidence 6
|
|
| >smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0031 Score=46.38 Aligned_cols=72 Identities=21% Similarity=0.248 Sum_probs=42.3
Q ss_pred eEEEECCCchHHHHHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+|++|.+|..+++.|.+. ++++.++ +|+.+..+..............+..+.+.+. ..++|+||.|.+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~~~~~~l~av~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~DvV~~~~~ 74 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAEHPDFEVVALAASARSAGKRVSEAGPHLKGEVVLELEPEDFE--ELAVDIVFLALP 74 (122)
T ss_pred CEEEECCCChHHHHHHHHHhcCCCceEEEEEechhhcCcCHHHHCcccccccccccccCChh--hcCCCEEEEcCC
Confidence 5899999999999999999985 7788888 4432222221111000000001222333333 258999999876
|
The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase. |
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.006 Score=53.30 Aligned_cols=36 Identities=19% Similarity=0.291 Sum_probs=30.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
...++|+|+|+ |-+|+++++.|++.|. ++++++++.
T Consensus 22 L~~~~VlIiG~-GglGs~va~~La~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVGA-GALGAANAEALVRAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 34568999995 8899999999999997 888888864
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.00086 Score=53.99 Aligned_cols=68 Identities=18% Similarity=0.197 Sum_probs=47.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..|+|+|+|. |.+|+++++.|.+.|++|++.+++++........ + +....+.+.+.. .++|+++.||.
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~-----~-g~~~v~~~~l~~--~~~Dv~vp~A~ 94 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAEL-----F-GATVVAPEEIYS--VDADVFAPCAL 94 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-----c-CCEEEcchhhcc--ccCCEEEeccc
Confidence 3479999995 8999999999999999999998876543332221 1 123333332221 27999998875
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.001 Score=57.02 Aligned_cols=75 Identities=13% Similarity=0.143 Sum_probs=49.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC--------CccccCc--------eeecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK--------KTRFFPG--------VMIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--------~~~~~~~--------~d~~d~~~~~~~ 83 (325)
.+||.|+| +|.+|..++..|++.|++|++++++++......... ....... ..+.-.+++.++
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~d~~~a 81 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVRDLEATKEAPAEAALNRITLTTDLAEA 81 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHcCeEEeCCHHHH
Confidence 36899999 599999999999999999999999875432221100 0000000 011112456677
Q ss_pred hCCCCEEEECCC
Q 020476 84 IQGSTAVVNLAG 95 (325)
Q Consensus 84 ~~~~d~vi~~a~ 95 (325)
++++|+||-+..
T Consensus 82 ~~~aDlVieavp 93 (287)
T PRK08293 82 VKDADLVIEAVP 93 (287)
T ss_pred hcCCCEEEEecc
Confidence 889999999974
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0011 Score=56.88 Aligned_cols=69 Identities=20% Similarity=0.143 Sum_probs=52.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..+|++|+|. |.+|+.+++.|...|.+|++++|++........ .+++..+.+.+.+.++++|+||+++.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-------~G~~~~~~~~l~~~l~~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE-------MGLSPFHLSELAEEVGKIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------cCCeeecHHHHHHHhCCCCEEEECCC
Confidence 3579999995 899999999999999999999998654322211 12333344567778889999999864
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.00072 Score=57.54 Aligned_cols=75 Identities=12% Similarity=0.158 Sum_probs=51.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...++++|+|+ |.+|++++..|.+.| .+|+++.|+.++...+...... ...+.+ +. ...+.+.++|+||++...
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~--~~~~~~-~~-~~~~~~~~~DivInaTp~ 195 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGA--LGKAEL-DL-ELQEELADFDLIINATSA 195 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhh--ccceee-cc-cchhccccCCEEEECCcC
Confidence 34568999996 999999999999999 7999999987765444322110 111222 11 234556789999999865
Q ss_pred C
Q 020476 97 P 97 (325)
Q Consensus 97 ~ 97 (325)
.
T Consensus 196 g 196 (278)
T PRK00258 196 G 196 (278)
T ss_pred C
Confidence 3
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0021 Score=54.92 Aligned_cols=39 Identities=23% Similarity=0.269 Sum_probs=34.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 59 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~ 59 (325)
+.+|.|+|+ |.+|..++..|+..|++|++++++++....
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~ 43 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATA 43 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHH
Confidence 358999995 999999999999999999999998876443
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0029 Score=55.11 Aligned_cols=73 Identities=27% Similarity=0.218 Sum_probs=49.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhhC--CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~~--~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.+...|..+++++.++++......... -..++..+.+. +.++.. ++|+|+++.
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGA---d~vi~y~~~~~~~~v~~~t~g~gvDvv~D~v 219 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGA---DHVINYREEDFVEQVRELTGGKGVDVVLDTV 219 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHcCCCCceEEEECC
Confidence 4589999999999999999888888777777766655444333322 12234444432 223332 699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 220 G 220 (326)
T COG0604 220 G 220 (326)
T ss_pred C
Confidence 7
|
|
| >TIGR00036 dapB dihydrodipicolinate reductase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0074 Score=50.95 Aligned_cols=33 Identities=30% Similarity=0.442 Sum_probs=28.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEec
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTR 52 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r 52 (325)
||||.|+|++|.+|+.+++.+.+. +.++.++..
T Consensus 1 ~ikV~IiGa~G~MG~~i~~~i~~~~~~elvav~d 34 (266)
T TIGR00036 1 TIKVAVAGAAGRMGRELIKAALAAEGLQLVAAFE 34 (266)
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEe
Confidence 469999999999999999999864 678777654
|
|
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0054 Score=52.89 Aligned_cols=100 Identities=20% Similarity=0.254 Sum_probs=65.5
Q ss_pred EEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|.|+|+ |.+|..++..|+..|. +|++++++++..... ..... .......+.-..+. +.++++|+||.+++.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~~~-~~~~~~~I~~t~d~-~~l~dADiVIit~g~p 77 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQAAP-ILGSDTKVTGTNDY-EDIAGSDVVVITAGIP 77 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHhhh-hcCCCeEEEEcCCH-HHhCCCCEEEEecCCC
Confidence 578997 9999999999988776 999999987543211 11000 00111233222234 4579999999999875
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.... ....+....|+...+.+++.+.+.
T Consensus 78 ~~~~---~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 78 RKPG---MSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred CCcC---CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322 234456667888888998888884
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0056 Score=50.83 Aligned_cols=94 Identities=11% Similarity=0.057 Sum_probs=63.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
|||+|+|+|||+ =|+.|++.|.+.|++|++.+-........ .... ....-+.+.+.+.+.++ ++++||++.-+
T Consensus 1 ~~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~~~~-~~~~---v~~G~l~~~~~l~~~l~~~~i~~VIDATHP 75 (248)
T PRK08057 1 MMPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGGPAD-LPGP---VRVGGFGGAEGLAAYLREEGIDLVIDATHP 75 (248)
T ss_pred CCceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCCccc-CCce---EEECCCCCHHHHHHHHHHCCCCEEEECCCc
Confidence 567999999987 58999999999999877766544222111 1100 11122337889998885 79999999754
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
. -...++++.++|++ .+..-+
T Consensus 76 f----------------A~~is~~a~~ac~~--~~ipyi 96 (248)
T PRK08057 76 Y----------------AAQISANAAAACRA--LGIPYL 96 (248)
T ss_pred c----------------HHHHHHHHHHHHHH--hCCcEE
Confidence 2 13456788999999 566644
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.01 Score=49.18 Aligned_cols=102 Identities=18% Similarity=0.160 Sum_probs=61.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC------------------ccccCceeec----
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK------------------TRFFPGVMIA---- 75 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~------------------~~~~~~~d~~---- 75 (325)
...+|+|+| .|.+|+.+++.|+..|. ++++++.+.-....+..... ....+.+++.
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~ 101 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINA 101 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEec
Confidence 345899999 59999999999999985 78888775433222211100 0001111111
Q ss_pred --CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeee
Q 020476 76 --EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142 (325)
Q Consensus 76 --d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~ 142 (325)
+.+.+.++++++|+||.+... ......+-++|.+ .+ .++|+.++.+
T Consensus 102 ~i~~~~~~~~~~~~DlVvd~~D~------------------~~~r~~ln~~~~~--~~-ip~v~~~~~g 149 (240)
T TIGR02355 102 KLDDAELAALIAEHDIVVDCTDN------------------VEVRNQLNRQCFA--AK-VPLVSGAAIR 149 (240)
T ss_pred cCCHHHHHHHhhcCCEEEEcCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEecc
Confidence 344566778899999998631 2222345577777 44 5677755543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0064 Score=53.15 Aligned_cols=69 Identities=17% Similarity=0.242 Sum_probs=41.4
Q ss_pred CeEEEECCCchHHHHHHHHHH-hCCCe---EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQ-ADNHQ---VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~-~~g~~---V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+||||.+|+.+++.|. ++++. ++.++-+.+......-. .....+.+.+.. +.++++|++|.+++
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~e~~fp~~~~~~~ss~~s~g~~~~f~-----~~~~~v~~~~~~-~~~~~vDivffa~g 73 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDI-DALKALDIIITCQG 73 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHhCCCCccccEEEEEchhhCCCcCCCC-----CCcceEEcCccc-ccccCCCEEEEcCC
Confidence 489999999999999999998 55554 44444332222211111 011222232222 24578999999987
|
|
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.013 Score=47.59 Aligned_cols=99 Identities=14% Similarity=0.218 Sum_probs=62.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcc---cccCCCC----C-----------ccccCce------eec
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKA---ELIFPGK----K-----------TRFFPGV------MIA 75 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~---~~~~~~~----~-----------~~~~~~~------d~~ 75 (325)
-+|+|+| -|.+|++.++.|.+.|. +++.++-+.-.. .+..... . ..-.+.+ ++.
T Consensus 31 ~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f~ 109 (263)
T COG1179 31 AHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDFI 109 (263)
T ss_pred CcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhhh
Confidence 4899999 58899999999999986 666665432111 0000000 0 0001112 333
Q ss_pred CCchhHhhhC-CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 76 EEPQWRDCIQ-GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 76 d~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
+++.+.+++. ++|+||.+.- |+..-..|+..|++ .+. -++||.++
T Consensus 110 t~en~~~~~~~~~DyvIDaiD------------------~v~~Kv~Li~~c~~--~ki---~vIss~Ga 155 (263)
T COG1179 110 TEENLEDLLSKGFDYVIDAID------------------SVRAKVALIAYCRR--NKI---PVISSMGA 155 (263)
T ss_pred CHhHHHHHhcCCCCEEEEchh------------------hhHHHHHHHHHHHH--cCC---CEEeeccc
Confidence 6777777764 6999999852 35555678899998 443 37888877
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0025 Score=49.54 Aligned_cols=56 Identities=21% Similarity=0.342 Sum_probs=46.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+++.+|..+++.|.++|.+|++..|+. +.+.+.++++|+||.+.+.+
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~-----------------------~~l~~~l~~aDiVIsat~~~ 98 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT-----------------------KNLKEHTKQADIVIVAVGKP 98 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc-----------------------hhHHHHHhhCCEEEEcCCCC
Confidence 457999999866789999999999999999888742 35567788999999998754
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.001 Score=57.23 Aligned_cols=66 Identities=14% Similarity=0.254 Sum_probs=50.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|++|.|+| .|.+|..+++.|++.|++|++++|++++........ +. ..++..++++++|+||-|..
T Consensus 1 m~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~~~g-------~~--~~~s~~~~~~~aDvVi~~vp 66 (296)
T PRK15461 1 MAAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALVDKG-------AT--PAASPAQAAAGAEFVITMLP 66 (296)
T ss_pred CCeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHcC-------Cc--ccCCHHHHHhcCCEEEEecC
Confidence 35899999 799999999999999999999999887655433221 11 22345567788999998864
|
|
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0027 Score=55.57 Aligned_cols=74 Identities=22% Similarity=0.136 Sum_probs=50.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC----CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d~vi~~a~ 95 (325)
.++|||.||+|-+|++.++-+...|..+++..++.++.+....... -..+|..+++..+...+ ++|+|++|+|
T Consensus 158 g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGA---d~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg 234 (347)
T KOG1198|consen 158 GKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGA---DEVVDYKDENVVELIKKYTGKGVDVVLDCVG 234 (347)
T ss_pred CCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCC---cEeecCCCHHHHHHHHhhcCCCccEEEECCC
Confidence 4589999999999999999888888555555555555444333322 22356666555544443 5999999998
Q ss_pred C
Q 020476 96 T 96 (325)
Q Consensus 96 ~ 96 (325)
.
T Consensus 235 ~ 235 (347)
T KOG1198|consen 235 G 235 (347)
T ss_pred C
Confidence 5
|
|
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0034 Score=58.02 Aligned_cols=74 Identities=15% Similarity=0.156 Sum_probs=50.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----------CCcccc-CceeecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------KKTRFF-PGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----------~~~~~~-~~~d~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| +|.+|..++..|++.|++|++++++++........ ...... ....+.-.+++.++++++|+
T Consensus 5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~g~i~~~~~~~ea~~~aD~ 83 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAMLTDAPLPPEGRLTFCASLAEAVAGADW 83 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhhccchhhhhhceEeeCCHHHHhcCCCE
Confidence 5899998 69999999999999999999999987664332100 000000 00012223456677899999
Q ss_pred EEECCC
Q 020476 90 VVNLAG 95 (325)
Q Consensus 90 vi~~a~ 95 (325)
|+-+..
T Consensus 84 Vieavp 89 (495)
T PRK07531 84 IQESVP 89 (495)
T ss_pred EEEcCc
Confidence 998864
|
|
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.016 Score=46.63 Aligned_cols=34 Identities=15% Similarity=0.306 Sum_probs=28.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
..+|+|+|+.| +|+++++.|+..|. +++.++.+.
T Consensus 19 ~s~VlviG~gg-lGsevak~L~~~GVg~i~lvD~d~ 53 (198)
T cd01485 19 SAKVLIIGAGA-LGAEIAKNLVLAGIDSITIVDHRL 53 (198)
T ss_pred hCcEEEECCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 45999999766 99999999999995 688888753
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0011 Score=59.47 Aligned_cols=74 Identities=20% Similarity=0.223 Sum_probs=56.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |-.|+.+++.|.+.| .++++..|+..+...+... +........+++.+.+.++|+||+|.+.+
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~-----~~~~~~~~~~~l~~~l~~aDiVI~aT~a~ 253 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSA-----FRNASAHYLSELPQLIKKADIIIAAVNVL 253 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHH-----hcCCeEecHHHHHHHhccCCEEEECcCCC
Confidence 4579999995 999999999999998 4799999987765544432 11123444567778888999999999865
Q ss_pred C
Q 020476 98 I 98 (325)
Q Consensus 98 ~ 98 (325)
.
T Consensus 254 ~ 254 (414)
T PRK13940 254 E 254 (414)
T ss_pred C
Confidence 3
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0034 Score=54.34 Aligned_cols=68 Identities=15% Similarity=0.091 Sum_probs=47.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.|+| .|.+|..++..|.+.|+ +|++++|+++.......... .+. -.+...+.++++|+||.++.
T Consensus 6 ~~~I~IIG-~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~------~~~-~~~~~~~~~~~aDvViiavp 75 (307)
T PRK07502 6 FDRVALIG-IGLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGL------GDR-VTTSAAEAVKGADLVILCVP 75 (307)
T ss_pred CcEEEEEe-eCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCC------Cce-ecCCHHHHhcCCCEEEECCC
Confidence 46999999 79999999999999884 89999998765433222110 011 11234556788999999975
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.00089 Score=57.37 Aligned_cols=74 Identities=12% Similarity=0.174 Sum_probs=49.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--------ccccCc-------eeecCCchhHhhhC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--------TRFFPG-------VMIAEEPQWRDCIQ 85 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~-------~d~~d~~~~~~~~~ 85 (325)
++|.|+|+ |.+|..++..|++.|++|++++++++.......... ...... ..+.-.+++.++++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~ 80 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVARGKLTEAARQAALARLSYSLDLKAAVA 80 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhCeEEeCcHHHhhc
Confidence 58999995 999999999999999999999998766443221000 000000 00111245667788
Q ss_pred CCCEEEECCC
Q 020476 86 GSTAVVNLAG 95 (325)
Q Consensus 86 ~~d~vi~~a~ 95 (325)
++|+||-|..
T Consensus 81 ~aD~Vi~avp 90 (288)
T PRK09260 81 DADLVIEAVP 90 (288)
T ss_pred CCCEEEEecc
Confidence 9999999975
|
|
| >COG1712 Predicted dinucleotide-utilizing enzyme [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0044 Score=49.49 Aligned_cols=66 Identities=23% Similarity=0.284 Sum_probs=44.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+| .|.||..+++.+.+. +. .|.+.+|+.++....... .... ....+.+++.++|.++-||+
T Consensus 1 l~vgiVG-cGaIG~~l~e~v~~~~~~~e~v~v~D~~~ek~~~~~~~-----~~~~---~~s~ide~~~~~DlvVEaAS 69 (255)
T COG1712 1 LKVGIVG-CGAIGKFLLELVRDGRVDFELVAVYDRDEEKAKELEAS-----VGRR---CVSDIDELIAEVDLVVEAAS 69 (255)
T ss_pred CeEEEEe-ccHHHHHHHHHHhcCCcceeEEEEecCCHHHHHHHHhh-----cCCC---ccccHHHHhhccceeeeeCC
Confidence 5899999 799999999877643 24 466777877776544332 1112 22455565677888888876
|
|
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0029 Score=54.89 Aligned_cols=75 Identities=13% Similarity=0.151 Sum_probs=48.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--ccccCc--------eeecCCchhHhhhCCCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--TRFFPG--------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~--------~d~~d~~~~~~~~~~~d~ 89 (325)
.++|.|+| .|.+|..++..|++.|++|++++++++.......... ...... ..+.-.++..++++++|+
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~aDl 82 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGVIERALGVYAPLGIASAGMGRIRMEAGLAAAVSGADL 82 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHhhhcccHHHHhhceEEeCCHHHHhccCCE
Confidence 35899999 5999999999999999999999997765433221000 000000 001112345566789999
Q ss_pred EEECCC
Q 020476 90 VVNLAG 95 (325)
Q Consensus 90 vi~~a~ 95 (325)
||-+..
T Consensus 83 Vi~av~ 88 (311)
T PRK06130 83 VIEAVP 88 (311)
T ss_pred EEEecc
Confidence 999864
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0023 Score=57.47 Aligned_cols=169 Identities=17% Similarity=0.165 Sum_probs=93.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhC---C-C---eEEEEecC--CCcccccC----CCCCccccCceeecCCchhHhhhCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD---N-H---QVRVLTRS--RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~---g-~---~V~~~~r~--~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~ 87 (325)
-+|+||||+|.||.+|+-.+++- | . .+..++.. .+...... ... ......+.+.+ .-.+.++++
T Consensus 124 ~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a-~pll~~v~i~~--~~~ea~~da 200 (452)
T cd05295 124 LQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLA-FPLLRGISVTT--DLDVAFKDA 200 (452)
T ss_pred eEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhH-HhhcCCcEEEE--CCHHHhCCC
Confidence 37999999999999999988763 3 2 35555553 22111100 000 00011233332 234778999
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC-CCCCCch--
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES-SPSGNDY-- 164 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~-~~~~~~y-- 164 (325)
|+||-+||.+.. ...+..+..+.|+.-.+.+.+++.+......+++.+.|--+.... ....... .-+....
T Consensus 201 DvvIitag~prk---~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~tNPvD~~t---~i~~k~apgiP~~rVig 274 (452)
T cd05295 201 HVIVLLDDFLIK---EGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGRTFLNLKT---SILIKYAPSIPRKNIIA 274 (452)
T ss_pred CEEEECCCCCCC---cCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHH---HHHHHHcCCCCHHHEEE
Confidence 999999997522 234577888999999999999998842222566666541110000 0000000 0011111
Q ss_pred HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC
Q 020476 165 LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~ 198 (325)
.+............++.+++..-|+-..|+|..+
T Consensus 275 ~gtlds~R~r~~LA~kl~V~~~~V~~~~VwGeHG 308 (452)
T cd05295 275 VARLQENRAKALLARKLNVNSAGIKDVIVWGNIG 308 (452)
T ss_pred ecchHHHHHHHHHHHHhCcCHHHceeeEEEEccC
Confidence 1112233344444455678877887778888754
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0029 Score=58.02 Aligned_cols=76 Identities=18% Similarity=0.234 Sum_probs=55.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
.+++|+|+|+ |.+|..+++.|.+.|++|++++++++.................|..+.+.+.++ ++++|+||-+..
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~~~~~~~i~gd~~~~~~L~~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEELPNTLVLHGDGTDQELLEEEGIDEADAFIALTN 306 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHCCCCeEEECCCCCHHHHHhcCCccCCEEEECCC
Confidence 3578999996 999999999999999999999998876544332211011334577777777544 468999987654
|
|
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0025 Score=58.29 Aligned_cols=75 Identities=15% Similarity=0.054 Sum_probs=47.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-CCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a~~~ 97 (325)
..++|+|+|+.| +|.+.++.|++.|++|++.+++............ -.++++.....-...+. ++|.||..+|.+
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~---~~g~~~~~~~~~~~~~~~~~d~vV~s~gi~ 79 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELL---EEGIKVICGSHPLELLDEDFDLMVKNPGIP 79 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHH---hcCCEEEeCCCCHHHhcCcCCEEEECCCCC
Confidence 346899999977 9999999999999999999876533211100000 11223321111112234 499999999875
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.013 Score=48.26 Aligned_cols=104 Identities=14% Similarity=0.149 Sum_probs=61.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC------------------ccccC--ceeec-
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK------------------TRFFP--GVMIA- 75 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~------------------~~~~~--~~d~~- 75 (325)
....+|+|+| .|-+|+++++.|...|. ++++++.+.-....+..... ....+ .++..
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~i~~~~ 97 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAINPDVEIEAYN 97 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHhCCCCEEEEec
Confidence 3446999999 69999999999999996 77777654322111111000 00011 12211
Q ss_pred ---CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 76 ---EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 76 ---d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
+.+.+.+.++++|+||.|... ...-..+-++|.+ .+ .++|+.+..+.
T Consensus 98 ~~i~~~~~~~~~~~~DvVi~~~d~------------------~~~r~~l~~~~~~--~~-ip~i~~g~~g~ 147 (228)
T cd00757 98 ERLDAENAEELIAGYDLVLDCTDN------------------FATRYLINDACVK--LG-KPLVSGAVLGF 147 (228)
T ss_pred ceeCHHHHHHHHhCCCEEEEcCCC------------------HHHHHHHHHHHHH--cC-CCEEEEEeccC
Confidence 234556677899999998642 1122345677777 44 57777765543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0074 Score=51.50 Aligned_cols=56 Identities=13% Similarity=0.247 Sum_probs=40.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
-||.|.|||||.|..|++.|..+.+ ++..++-+.. . ++....++++++|+||.+..
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~HP~~el~~l~s~~~----------------~---~~~~~~~~~~~~D~vFlalp 58 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSGRDDIELLSIAPDRR----------------K---DAAERAKLLNAADVAILCLP 58 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhCCCCeEEEEEecccc----------------c---CcCCHhHhhcCCCEEEECCC
Confidence 3899999999999999999988753 6666643321 0 11123456678999998875
|
This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0012 Score=57.23 Aligned_cols=72 Identities=21% Similarity=0.301 Sum_probs=53.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |-+|..+++.|...| .+|++++|++++...+.... +.+..+.+.+.+.+.++|+||.+.+.+
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVi~at~~~ 249 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------GGNAVPLDELLELLNEADVVISATGAP 249 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------CCeEEeHHHHHHHHhcCCEEEECCCCC
Confidence 4579999996 999999999998865 68999999876654433321 123444456777788999999998743
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0012 Score=52.20 Aligned_cols=66 Identities=27% Similarity=0.198 Sum_probs=48.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|.|+| .|.||+.+++.|..-|.+|++++|+......... ..+ ....+.++++.+|+|+.+...
T Consensus 36 g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------~~~---~~~~l~ell~~aDiv~~~~pl 101 (178)
T PF02826_consen 36 GKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------FGV---EYVSLDELLAQADIVSLHLPL 101 (178)
T ss_dssp TSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------TTE---EESSHHHHHHH-SEEEE-SSS
T ss_pred CCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------ccc---eeeehhhhcchhhhhhhhhcc
Confidence 46999999 7999999999999999999999998865431110 011 344777888899999988764
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0075 Score=51.04 Aligned_cols=69 Identities=23% Similarity=0.344 Sum_probs=48.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC---chhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE---PQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~---~~~~~~~~~~d~vi~~a~ 95 (325)
++|+|+|.| .|.+|+++++.|.++|+.|.++.++.+........ ..++.|. +.......++|+||-+..
T Consensus 2 ~~~~v~IvG-~GliG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~-------~lgv~d~~~~~~~~~~~~~aD~VivavP 73 (279)
T COG0287 2 ASMKVGIVG-LGLMGGSLARALKEAGLVVRIIGRDRSAATLKAAL-------ELGVIDELTVAGLAEAAAEADLVIVAVP 73 (279)
T ss_pred CCcEEEEEC-CchHHHHHHHHHHHcCCeEEEEeecCcHHHHHHHh-------hcCcccccccchhhhhcccCCEEEEecc
Confidence 456888888 89999999999999999998888877553322221 1334343 222455678999998864
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0041 Score=46.02 Aligned_cols=88 Identities=9% Similarity=0.046 Sum_probs=60.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
.++|+++| +| -|.+++..|.+.|++|++++.++........... .....|+.+++. ++.+++|.|+.+=..
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~--~~v~dDlf~p~~--~~y~~a~liysirpp--- 87 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGL--NAFVDDLFNPNL--EIYKNAKLIYSIRPP--- 87 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCC--eEEECcCCCCCH--HHHhcCCEEEEeCCC---
Confidence 46899999 67 8889999999999999999999875443322210 134456666542 345789999987432
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~ 133 (325)
.+....+++.+++ .++.
T Consensus 88 ---------------~el~~~~~~la~~--~~~~ 104 (134)
T PRK04148 88 ---------------RDLQPFILELAKK--INVP 104 (134)
T ss_pred ---------------HHHHHHHHHHHHH--cCCC
Confidence 2233467888888 4554
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.0016 Score=58.82 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=53.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |-+|..+++.|...| .+|++++|+.++........ +....+.+.+.+.+.++|+||.+.+.+
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~------g~~~i~~~~l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL------GGEAVKFEDLEEYLAEADIVISSTGAP 251 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------CCeEeeHHHHHHHHhhCCEEEECCCCC
Confidence 3469999995 999999999999999 78999999876543332211 112234456777788999999998754
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN02688 pyrroline-5-carboxylate reductase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0031 Score=53.35 Aligned_cols=64 Identities=14% Similarity=0.260 Sum_probs=46.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC----eEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH----QVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.++| .|.+|..+++.|++.|+ +|+++ .|++++....... ++... +...++++++|+||-|.
T Consensus 1 ~kI~~IG-~G~mG~a~a~~L~~~g~~~~~~i~v~~~r~~~~~~~~~~~-------g~~~~--~~~~e~~~~aDvVil~v 69 (266)
T PLN02688 1 FRVGFIG-AGKMAEAIARGLVASGVVPPSRISTADDSNPARRDVFQSL-------GVKTA--ASNTEVVKSSDVIILAV 69 (266)
T ss_pred CeEEEEC-CcHHHHHHHHHHHHCCCCCcceEEEEeCCCHHHHHHHHHc-------CCEEe--CChHHHHhcCCEEEEEE
Confidence 6899999 89999999999999998 88888 7776554333221 12222 23445677899999986
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0016 Score=56.89 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=49.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc-cccCce----eecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT-RFFPGV----MIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~----d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+|||.|+| .|-+|..++..|++.|++|++++|+++........... ....+. .+.-.++..++++++|+||-+.
T Consensus 4 ~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~~~aD~Vi~~v 82 (328)
T PRK14618 4 GMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEALAGADFAVVAV 82 (328)
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHHcCCCEEEEEC
Confidence 57999999 69999999999999999999999976653332211000 000011 1222234556678899999886
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 83 ~ 83 (328)
T PRK14618 83 P 83 (328)
T ss_pred c
Confidence 4
|
|
| >PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0026 Score=56.61 Aligned_cols=68 Identities=15% Similarity=0.129 Sum_probs=51.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
||+|+|+|+ |.+|+.++..+.+.|++|++++.++......... .....++.|.+.+.++++.+|+|..
T Consensus 2 ~~~igilG~-Gql~~ml~~aa~~lG~~v~~~d~~~~~pa~~~ad----~~~~~~~~D~~~l~~~a~~~dvit~ 69 (372)
T PRK06019 2 MKTIGIIGG-GQLGRMLALAAAPLGYKVIVLDPDPDSPAAQVAD----EVIVADYDDVAALRELAEQCDVITY 69 (372)
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCCCCchhHhCc----eEEecCCCCHHHHHHHHhcCCEEEe
Confidence 568999996 8999999999999999999999876543221111 1233567788899999999998754
|
|
| >PRK13304 L-aspartate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.005 Score=51.97 Aligned_cols=67 Identities=18% Similarity=0.252 Sum_probs=43.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC--CCeEEE-EecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|+| .|.+|+.+++.|.+. +.++.+ ++|++++....... + +.. -.+++.+++.++|+|+.|+.
T Consensus 1 mmrIgIIG-~G~iG~~ia~~l~~~~~~~elv~v~d~~~~~a~~~a~~-----~-~~~--~~~~~~ell~~~DvVvi~a~ 70 (265)
T PRK13304 1 MLKIGIVG-CGAIASLITKAILSGRINAELYAFYDRNLEKAENLASK-----T-GAK--ACLSIDELVEDVDLVVECAS 70 (265)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHcCCCCeEEEEEECCCHHHHHHHHHh-----c-CCe--eECCHHHHhcCCCEEEEcCC
Confidence 47999999 699999999999876 356444 45555443332221 1 111 12345566688999999985
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0071 Score=53.09 Aligned_cols=72 Identities=22% Similarity=0.159 Sum_probs=48.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-CCCccccCceeecCCchhH----hhh-CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWR----DCI-QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~----~~~-~~~d~vi~~a 94 (325)
.+|+|+||+|.+|..+++.+...|.+|+++++++++...... ... ...+|..+.+.+. +.. .++|+|+++.
T Consensus 153 ~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~ 229 (338)
T cd08295 153 ETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGF---DDAFNYKEEPDLDAALKRYFPNGIDIYFDNV 229 (338)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCC---ceeEEcCCcccHHHHHHHhCCCCcEEEEECC
Confidence 589999999999999999888889999999988766444332 111 1112322222232 222 3789999997
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 230 g 230 (338)
T cd08295 230 G 230 (338)
T ss_pred C
Confidence 6
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0055 Score=52.80 Aligned_cols=65 Identities=15% Similarity=0.295 Sum_probs=45.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
|+|.|+| .|.+|..+++.|++.|++|++++|++++....... ++.. .+...++++ ++|+||-+..
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~-------g~~~--~~s~~~~~~~~~~advVi~~vp 68 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVAGKL-------GITA--RHSLEELVSKLEAPRTIWVMVP 68 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCee--cCCHHHHHHhCCCCCEEEEEec
Confidence 5899998 79999999999999999999999987654443221 1121 123334443 3688888764
|
|
| >PRK12491 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0036 Score=53.04 Aligned_cols=68 Identities=12% Similarity=0.165 Sum_probs=47.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|.|||.++| .|.+|.++++.|++.|+ +|++.+|+.++...+... + ++... +...++++++|+||-+.
T Consensus 1 ~~~~IgfIG-~G~MG~aia~~L~~~g~~~~~~I~v~~r~~~~~~~l~~~-----~-g~~~~--~~~~e~~~~aDiIiLav 71 (272)
T PRK12491 1 MNKQIGFIG-CGNMGIAMIGGMINKNIVSPDQIICSDLNVSNLKNASDK-----Y-GITIT--TNNNEVANSADILILSI 71 (272)
T ss_pred CCCeEEEEC-ccHHHHHHHHHHHHCCCCCCceEEEECCCHHHHHHHHHh-----c-CcEEe--CCcHHHHhhCCEEEEEe
Confidence 356999999 79999999999999874 699998877654433221 1 12222 23445567899999886
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
-
T Consensus 72 k 72 (272)
T PRK12491 72 K 72 (272)
T ss_pred C
Confidence 4
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.002 Score=58.24 Aligned_cols=72 Identities=22% Similarity=0.301 Sum_probs=53.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |-+|..+++.|...|. +|++++|++.+...+.... +.+..+.+.+.+.+.++|+||.+.+.+
T Consensus 181 ~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~------g~~~~~~~~~~~~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 181 SGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF------GGEAIPLDELPEALAEADIVISSTGAP 253 (423)
T ss_pred cCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------CCcEeeHHHHHHHhccCCEEEECCCCC
Confidence 4579999995 9999999999999896 8999999876644333221 123334456667778999999998754
|
|
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.012 Score=48.93 Aligned_cols=34 Identities=24% Similarity=0.223 Sum_probs=29.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+|+ |-+|+.+++.|+..|. ++++++.+
T Consensus 31 ~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 65 (245)
T PRK05690 31 KAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFD 65 (245)
T ss_pred cCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4469999996 9999999999999995 78887764
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0049 Score=53.79 Aligned_cols=72 Identities=17% Similarity=0.081 Sum_probs=48.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a~ 95 (325)
.+|||+||+|-+|..+++.+...|.+|+++++++++......... -..+|..+.+.+.+.+ +++|+|+++.|
T Consensus 140 ~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G 216 (325)
T TIGR02825 140 ETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGF---DVAFNYKTVKSLEETLKKASPDGYDCYFDNVG 216 (325)
T ss_pred CEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeccccccHHHHHHHhCCCCeEEEEECCC
Confidence 589999999999999999888889999999987765444332211 1112222222333222 26899999986
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.016 Score=51.06 Aligned_cols=35 Identities=20% Similarity=0.317 Sum_probs=29.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
...+|+|+|+ |-+|+.+++.|+..|. ++++++.+.
T Consensus 27 ~~~~VlivG~-GGlGs~~a~~La~~Gvg~i~lvD~D~ 62 (355)
T PRK05597 27 FDAKVAVIGA-GGLGSPALLYLAGAGVGHITIIDDDT 62 (355)
T ss_pred hCCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence 3459999995 9999999999999996 788888754
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.013 Score=47.20 Aligned_cols=34 Identities=21% Similarity=0.308 Sum_probs=30.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+|+ |.+|+.++..|++.|. +++.++++
T Consensus 20 ~~~~V~IvG~-GglGs~ia~~La~~Gvg~i~lvD~D 54 (200)
T TIGR02354 20 EQATVAICGL-GGLGSNVAINLARAGIGKLILVDFD 54 (200)
T ss_pred hCCcEEEECc-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 3458999995 8899999999999998 79999987
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.0016 Score=55.89 Aligned_cols=64 Identities=16% Similarity=0.236 Sum_probs=48.3
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+| .|.+|..+++.|++.|++|++++|++++........ ....++..++++++|+||-|..
T Consensus 1 ~IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~~g---------~~~~~~~~~~~~~aDivi~~vp 64 (291)
T TIGR01505 1 KVGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLAAG---------AVTAETARQVTEQADVIFTMVP 64 (291)
T ss_pred CEEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHCC---------CcccCCHHHHHhcCCEEEEecC
Confidence 588998 799999999999999999999999876654433211 1122345677789999999864
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0031 Score=49.89 Aligned_cols=35 Identities=29% Similarity=0.425 Sum_probs=30.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
||.|+|+ |.+|+.++..++..|++|++++++++..
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l 35 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEAL 35 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHH
Confidence 6899996 9999999999999999999999987653
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK15182 Vi polysaccharide biosynthesis protein TviB; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0074 Score=54.52 Aligned_cols=75 Identities=13% Similarity=0.181 Sum_probs=49.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-------eeecCCchhHhhhCCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-------VMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-------~d~~d~~~~~~~~~~~d~vi~ 92 (325)
+|||.|+| .|++|..++..|.+ +|+|+++++++++...+........-+. ..+. ...-.+.++++|++|-
T Consensus 6 ~mkI~vIG-lGyvGlpmA~~la~-~~~V~g~D~~~~~ve~l~~G~~~~~e~~~~~l~~~g~l~-~t~~~~~~~~advvii 82 (425)
T PRK15182 6 EVKIAIIG-LGYVGLPLAVEFGK-SRQVVGFDVNKKRILELKNGVDVNLETTEEELREARYLK-FTSEIEKIKECNFYII 82 (425)
T ss_pred CCeEEEEC-cCcchHHHHHHHhc-CCEEEEEeCCHHHHHHHHCcCCCCCCCCHHHHHhhCCee-EEeCHHHHcCCCEEEE
Confidence 47999998 89999999999876 6999999999888666552211000000 0000 0111234679999999
Q ss_pred CCCCC
Q 020476 93 LAGTP 97 (325)
Q Consensus 93 ~a~~~ 97 (325)
|.+-+
T Consensus 83 ~Vptp 87 (425)
T PRK15182 83 TVPTP 87 (425)
T ss_pred EcCCC
Confidence 98754
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.006 Score=51.76 Aligned_cols=57 Identities=16% Similarity=0.311 Sum_probs=46.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
...++++|+|++|.+|+.++..|++.|.+|++..|.. ..+.+.++++|+||++.|.+
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t-----------------------~~L~~~~~~aDIvI~AtG~~ 213 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT-----------------------QNLPELVKQADIIVGAVGKP 213 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc-----------------------hhHHHHhccCCEEEEccCCC
Confidence 4457999999999999999999999999888887621 23555668999999999743
|
|
| >PLN02256 arogenate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.01 Score=51.02 Aligned_cols=67 Identities=18% Similarity=0.172 Sum_probs=46.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-CCCCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-~~~d~vi~~a~ 95 (325)
+.+|+|.|+| .|.+|..+++.|.+.|++|++++|+...... ... ++. ..+...+++ .++|+||-|..
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~~~G~~V~~~d~~~~~~~a-~~~-------gv~--~~~~~~e~~~~~aDvVilavp 101 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFVKQGHTVLATSRSDYSDIA-AEL-------GVS--FFRDPDDFCEEHPDVVLLCTS 101 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECccHHHHH-HHc-------CCe--eeCCHHHHhhCCCCEEEEecC
Confidence 4567999999 6999999999999999999999988532111 110 111 123344444 46999999864
|
|
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.0058 Score=52.72 Aligned_cols=67 Identities=18% Similarity=0.199 Sum_probs=46.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec-CCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+|.|+| .|.+|..+++.|++.|++|++++|++++........ +... +++.+.+.++++|+||-+..
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~~~~g-------~~~~~~~~e~~~~~~~~dvvi~~v~ 68 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEALAEEG-------ATGADSLEELVAKLPAPRVVWLMVP 68 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCC-------CeecCCHHHHHhhcCCCCEEEEEec
Confidence 5899999 799999999999999999999999876654433211 1221 23333222334688887754
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.061 Score=44.26 Aligned_cols=34 Identities=18% Similarity=0.269 Sum_probs=28.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
..+|+|+| .|-+|+++++.|++.|. ++++++.+.
T Consensus 11 ~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~ 45 (231)
T cd00755 11 NAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDV 45 (231)
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCE
Confidence 45899999 69999999999999995 788887653
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0049 Score=56.80 Aligned_cols=75 Identities=19% Similarity=0.250 Sum_probs=54.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |-+|..+++.|...|. +|+++.|+..+...+..... ...+.+...+++.+++.++|+||.+.+.+
T Consensus 265 ~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~---g~~i~~~~~~dl~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 265 ASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFP---DVEIIYKPLDEMLACAAEADVVFTSTSSE 340 (519)
T ss_pred CCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhC---CCceEeecHhhHHHHHhcCCEEEEccCCC
Confidence 3579999996 9999999999999996 79999998877655433210 01123334556677788999999987643
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0081 Score=52.38 Aligned_cols=71 Identities=27% Similarity=0.340 Sum_probs=48.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh---CCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---~~~d~vi~~a~~ 96 (325)
..+++|+||+|.+|..+++.+...|.+|++++++++......... .-++.+.+.+.+.+ .++|+|+++++.
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~d~v~~~~g~ 236 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELG------ADYVIDGSKFSEDVKKLGGADVVIELVGS 236 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcC------CcEEEecHHHHHHHHhccCCCEEEECCCh
Confidence 358999999999999999999999999999998765433322111 01222222122222 279999999873
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0082 Score=51.84 Aligned_cols=71 Identities=17% Similarity=0.196 Sum_probs=45.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee----cCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI----AEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~----~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||+|+|+ |.+|..++..|.+.|++|++++|+++........... ....+. .-.+...++ +++|+||-+.-
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~-~~~d~vila~k 75 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDALNENGLR--LEDGEITVPVLAADDPAEL-GPQDLVILAVK 75 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHHHHcCCc--ccCCceeecccCCCChhHc-CCCCEEEEecc
Confidence 68999995 9999999999999999999999976543333221110 000111 111223333 78999998864
|
|
| >PRK08818 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.013 Score=51.67 Aligned_cols=56 Identities=20% Similarity=0.185 Sum_probs=43.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.|+|.+|.+|+++++.|.+. +++|+++++... ......+.++++|+||-|..
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~~~~~~V~g~D~~d~--------------------~~~~~~~~v~~aDlVilavP 60 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRTRMQLEVIGHDPADP--------------------GSLDPATLLQRADVLIFSAP 60 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCEEEEEcCCcc--------------------ccCCHHHHhcCCCEEEEeCC
Confidence 469999999999999999999865 789999987411 01133456788999998874
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.031 Score=42.33 Aligned_cols=32 Identities=16% Similarity=0.305 Sum_probs=27.8
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
||+|+|+ |-+|+++++.|...|. ++++++.+.
T Consensus 1 ~VliiG~-GglGs~ia~~L~~~Gv~~i~ivD~d~ 33 (143)
T cd01483 1 RVLLVGL-GGLGSEIALNLARSGVGKITLIDFDT 33 (143)
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCEEEEEcCCC
Confidence 5899995 9999999999999997 788887653
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.024 Score=46.76 Aligned_cols=35 Identities=20% Similarity=0.338 Sum_probs=29.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
...+|+|+| .|-+|+++++.|+..|. ++++++.+.
T Consensus 26 ~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ 61 (231)
T PRK08328 26 KKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQT 61 (231)
T ss_pred hCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCc
Confidence 345899999 58999999999999995 788887643
|
|
| >PRK06444 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0043 Score=49.58 Aligned_cols=28 Identities=29% Similarity=0.387 Sum_probs=26.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVR 48 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~ 48 (325)
|||.|+||+|.+|+.+++.|.+.|+.|+
T Consensus 1 ~~~~iiG~~G~mG~~~~~~~~~~g~~v~ 28 (197)
T PRK06444 1 MMEIIIGKNGRLGRVLCSILDDNGLGVY 28 (197)
T ss_pred CEEEEEecCCcHHHHHHHHHHhCCCEEE
Confidence 6999999999999999999999999986
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.13 Score=43.36 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=29.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~ 53 (325)
...+|+|+| .|.+|+++++.|++.| -++++++.+
T Consensus 29 ~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D 63 (268)
T PRK15116 29 ADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMD 63 (268)
T ss_pred cCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 446899999 5999999999999999 588888865
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.01 Score=50.96 Aligned_cols=37 Identities=22% Similarity=0.255 Sum_probs=33.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 58 (325)
++|.|+| .|.+|..++..|+..|++|++++|+++...
T Consensus 5 ~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~ 41 (292)
T PRK07530 5 KKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLE 41 (292)
T ss_pred CEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHH
Confidence 5899999 599999999999999999999999876543
|
|
| >PRK06545 prephenate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.014 Score=51.77 Aligned_cols=67 Identities=21% Similarity=0.255 Sum_probs=48.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecC--CchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE--EPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d--~~~~~~~~~~~d~vi~~a~ 95 (325)
++|.|+| .|.+|..+++.|.+.|++|.+++++++........ +..+.+ .+.+.++++++|+||-|..
T Consensus 1 ~~I~iIG-~GliG~siA~~L~~~G~~v~i~~~~~~~~~~~~a~-------~~~~~~~~~~~~~~~~~~aDlVilavP 69 (359)
T PRK06545 1 RTVLIVG-LGLIGGSLALAIKAAGPDVFIIGYDPSAAQLARAL-------GFGVIDELAADLQRAAAEADLIVLAVP 69 (359)
T ss_pred CeEEEEE-eCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHh-------cCCCCcccccCHHHHhcCCCEEEEeCC
Confidence 4799998 79999999999999999999999887653322111 111122 2356677789999999874
|
|
| >KOG2018 consensus Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.04 Score=46.30 Aligned_cols=99 Identities=14% Similarity=0.200 Sum_probs=59.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC--------------------ccccCcee----ecC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK--------------------TRFFPGVM----IAE 76 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~--------------------~~~~~~~d----~~d 76 (325)
=|+|+| .|.+|+|++..|+++|. ++..++-+.-+...+..... ...|..+| +++
T Consensus 76 yVVVVG-~GgVGSwv~nmL~RSG~qKi~iVDfdqVSlsSLNrHs~Atl~DVG~PK~~clkkh~skiaPw~eIdar~~l~~ 154 (430)
T KOG2018|consen 76 YVVVVG-AGGVGSWVANMLLRSGVQKIRIVDFDQVSLSSLNRHSCATLADVGTPKVMCLKKHFSKIAPWCEIDARNMLWT 154 (430)
T ss_pred EEEEEe-cCchhHHHHHHHHHhcCceEEEechhhccHhhhhhhhhhhHhhcCCchHHHHHHHHHhhCccceecHHHhhcC
Confidence 478888 58899999999999996 45555432221111111000 00022222 224
Q ss_pred CchhHhhhC-CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeee
Q 020476 77 EPQWRDCIQ-GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 144 (325)
Q Consensus 77 ~~~~~~~~~-~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~ 144 (325)
.+.-.+++. ++|.|+.|. -|++.-..|+++|-. ++.+ .+||++++
T Consensus 155 ~~s~edll~gnPdFvvDci------------------DNidtKVdLL~y~~~--~~l~---Viss~Gaa 200 (430)
T KOG2018|consen 155 SSSEEDLLSGNPDFVVDCI------------------DNIDTKVDLLEYCYN--HGLK---VISSTGAA 200 (430)
T ss_pred CCchhhhhcCCCCeEeEhh------------------hhhhhhhHHHHHHHH--cCCc---eEeccCcc
Confidence 555555553 699999996 356667789999988 5655 67777763
|
|
| >PRK12921 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.0084 Score=51.83 Aligned_cols=34 Identities=29% Similarity=0.511 Sum_probs=30.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
|||+|+| .|.+|..++..|.+.|++|++++| ++.
T Consensus 1 mkI~IiG-~G~iG~~~a~~L~~~g~~V~~~~r-~~~ 34 (305)
T PRK12921 1 MRIAVVG-AGAVGGTFGGRLLEAGRDVTFLVR-PKR 34 (305)
T ss_pred CeEEEEC-CCHHHHHHHHHHHHCCCceEEEec-HHH
Confidence 6899999 599999999999999999999999 443
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.011 Score=51.10 Aligned_cols=66 Identities=21% Similarity=0.338 Sum_probs=50.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|.|+| .|.||+.+++.|..-|++|++++|....... . ......+++.++++++|+|+.+...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~~~---------~--~~~~~~~~l~e~l~~aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSWPG---------V--QSFAGREELSAFLSQTRVLINLLPN 200 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCCCC---------c--eeecccccHHHHHhcCCEEEECCCC
Confidence 346999999 8999999999999999999999986533210 0 1122456788999999999988754
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.043 Score=46.40 Aligned_cols=35 Identities=14% Similarity=0.137 Sum_probs=29.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
...+|+|+| .|-+|+.++..|+..|. +++.++.+.
T Consensus 26 ~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~ 61 (287)
T PRK08223 26 RNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDV 61 (287)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 345899999 58899999999999985 787777653
|
|
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.024 Score=50.79 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=28.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+| .|-+|+.+++.|...|. ++++++.+
T Consensus 41 ~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D 75 (392)
T PRK07878 41 KNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFD 75 (392)
T ss_pred hcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCC
Confidence 345899999 58999999999999986 67777764
|
|
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.55 E-value=0.0034 Score=53.50 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=51.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++++|+|+ |..|++++..|.+.|. +|++++|+..+.+.+...... .+....+...+.+.+.++++|+||++..
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~-~~~~~~~~~~~~~~~~~~~aDiVInaTp 201 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNA-RFPAARATAGSDLAAALAAADGLVHATP 201 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHh-hCCCeEEEeccchHhhhCCCCEEEECCc
Confidence 3468999995 8899999999999996 899999987765544321100 0111233333445556788999999953
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.017 Score=48.00 Aligned_cols=95 Identities=21% Similarity=0.251 Sum_probs=59.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|+|||+|||+ =|+.|++.|.+.|+ |.+-+-.+-.................-+.+.+.+.+.++ +++.||++.-+.
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g~~~~~~~~~~~~v~~G~lg~~~~l~~~l~~~~i~~vIDATHPf- 77 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYGGELLKPELPGLEVRVGRLGDEEGLAEFLRENGIDAVIDATHPF- 77 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhhHhhhccccCCceEEECCCCCHHHHHHHHHhCCCcEEEECCCch-
Confidence 7999999987 58999999999998 544333222211111110000011122337888988885 899999997542
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
-...++++.++|++ .++.-+
T Consensus 78 ---------------A~~is~na~~a~~~--~~ipyl 97 (249)
T PF02571_consen 78 ---------------AAEISQNAIEACRE--LGIPYL 97 (249)
T ss_pred ---------------HHHHHHHHHHHHhh--cCcceE
Confidence 13456788999999 666643
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK06928 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.0089 Score=50.86 Aligned_cols=68 Identities=9% Similarity=0.196 Sum_probs=45.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC----CeEEEEecCCCc-ccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
||+|.|+| .|.+|..+++.|.+.| ++|++++|+... ....... +..+.+ ..+..++++++|+||-+.
T Consensus 1 m~~I~iIG-~G~mG~ala~~L~~~g~~~~~~V~~~~r~~~~~~~~l~~~-----~~~~~~--~~~~~e~~~~aDvVilav 72 (277)
T PRK06928 1 MEKIGFIG-YGSMADMIATKLLETEVATPEEIILYSSSKNEHFNQLYDK-----YPTVEL--ADNEAEIFTKCDHSFICV 72 (277)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCCcccEEEEeCCcHHHHHHHHHH-----cCCeEE--eCCHHHHHhhCCEEEEec
Confidence 46899999 7999999999999987 789999986532 1111111 111221 123445677899999775
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 73 p 73 (277)
T PRK06928 73 P 73 (277)
T ss_pred C
Confidence 4
|
|
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.033 Score=49.36 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=29.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+| .|-+|+.+++.|...|. ++++++.+
T Consensus 40 ~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D 74 (370)
T PRK05600 40 HNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDD 74 (370)
T ss_pred cCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 345899999 58999999999999995 88888875
|
|
| >COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.026 Score=46.20 Aligned_cols=95 Identities=15% Similarity=0.116 Sum_probs=61.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
++|+|+|+|||+ =++.|+++|...+..+++.+-............. ...+-..+.+.+.+.++ ++|.||+..-+
T Consensus 1 ~~~~ilvlGGT~-Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~---~~~~G~l~~e~l~~~l~e~~i~llIDATHP 76 (257)
T COG2099 1 SMMRILLLGGTS-DARALAKKLAAAPVDIILSSLTGYGAKLAEQIGP---VRVGGFLGAEGLAAFLREEGIDLLIDATHP 76 (257)
T ss_pred CCceEEEEeccH-HHHHHHHHhhccCccEEEEEcccccccchhccCC---eeecCcCCHHHHHHHHHHcCCCEEEECCCh
Confidence 367999999998 4789999998887444444332222111111110 12234558888988885 79999998643
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
+ -...+.|++++|++ .++..+
T Consensus 77 y----------------Aa~iS~Na~~aake--~gipy~ 97 (257)
T COG2099 77 Y----------------AARISQNAARAAKE--TGIPYL 97 (257)
T ss_pred H----------------HHHHHHHHHHHHHH--hCCcEE
Confidence 2 14557799999999 677644
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0076 Score=51.71 Aligned_cols=36 Identities=19% Similarity=0.366 Sum_probs=32.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
++|.|+| .|.+|..++..|+..|++|++++++++..
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l 39 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEIL 39 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHH
Confidence 5899999 59999999999999999999999987654
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0033 Score=53.34 Aligned_cols=72 Identities=18% Similarity=0.180 Sum_probs=47.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++++|+|+ |.+|+.++..|++.|++|+++.|+.++...+...... ...+...+.+. ....++|+||++.+.
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~--~~~~~~DivInatp~ 188 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQR--YGEIQAFSMDE--LPLHRVDLIINATSA 188 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhh--cCceEEechhh--hcccCccEEEECCCC
Confidence 568999997 8999999999999999999999987654433221100 00011111111 123579999999875
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK07680 late competence protein ComER; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=50.03 Aligned_cols=66 Identities=24% Similarity=0.402 Sum_probs=46.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|+|.|+| .|.+|..+++.|.+.|+ +|++++|++.+....... +.++... ....++++++|+||-+.
T Consensus 1 m~I~iIG-~G~mG~ala~~L~~~g~~~~~~v~v~~r~~~~~~~~~~~-----~~g~~~~--~~~~~~~~~aDiVilav 70 (273)
T PRK07680 1 MNIGFIG-TGNMGTILIEAFLESGAVKPSQLTITNRTPAKAYHIKER-----YPGIHVA--KTIEEVISQSDLIFICV 70 (273)
T ss_pred CEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCHHHHHHHHHH-----cCCeEEE--CCHHHHHHhCCEEEEec
Confidence 5899999 69999999999999883 799999987554333221 1123332 23345567899999886
|
|
| >PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0089 Score=51.04 Aligned_cols=37 Identities=19% Similarity=0.267 Sum_probs=33.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
++||.|+| .|.+|..++..|+..|++|++++++++..
T Consensus 3 ~~kI~VIG-~G~mG~~ia~~la~~g~~V~~~d~~~~~~ 39 (282)
T PRK05808 3 IQKIGVIG-AGTMGNGIAQVCAVAGYDVVMVDISDAAV 39 (282)
T ss_pred ccEEEEEc-cCHHHHHHHHHHHHCCCceEEEeCCHHHH
Confidence 45899999 59999999999999999999999887654
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.012 Score=49.66 Aligned_cols=57 Identities=18% Similarity=0.333 Sum_probs=47.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
...++++|+|.++.+|+.++..|.++|.+|+...++. ..+.+.++++|+||.++|.+
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t-----------------------~~l~~~~~~ADIVIsAvg~p 212 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRS-----------------------KDMASYLKDADVIVSAVGKP 212 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCc-----------------------hhHHHHHhhCCEEEECCCCC
Confidence 4567999999999999999999999999999887532 24667788999999999864
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.0043 Score=54.98 Aligned_cols=73 Identities=10% Similarity=0.088 Sum_probs=52.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.+|+|+|+ |-+|...++.|...|.+|++++|++.+.......... ....+..+.+.+.+.++++|+||++++.
T Consensus 168 ~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~--~v~~~~~~~~~l~~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 168 GDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGG--RIHTRYSNAYEIEDAVKRADLLIGAVLI 240 (370)
T ss_pred ceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCc--eeEeccCCHHHHHHHHccCCEEEEcccc
Confidence 47999996 9999999999999999999999987553332211100 0112334556778888999999999854
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.038 Score=44.36 Aligned_cols=35 Identities=14% Similarity=0.339 Sum_probs=28.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
...+|+|+|+.| +|+++++.|...|. +++.++.+.
T Consensus 20 ~~s~VlIiG~gg-lG~evak~La~~GVg~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGLKG-LGAEIAKNLVLSGIGSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcCCH-HHHHHHHHHHHcCCCEEEEEECCc
Confidence 346999999655 99999999999996 688887653
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PF13950 Epimerase_Csub: UDP-glucose 4-epimerase C-term subunit; PDB: 1EK5_A 1I3K_B 1I3M_B 1HZJ_A 1EK6_A 1I3N_A 1I3L_A 2CNB_B 1GY8_D 1NAI_A | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.00094 Score=42.36 Aligned_cols=50 Identities=24% Similarity=0.371 Sum_probs=22.9
Q ss_pred HHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHH-HHcCCCcccccHHHHHHHHh
Q 020476 265 LGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 265 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~lg~~p~~~~~~~~l~~~~ 324 (325)
+.++.|++..+.+. ....|+.+....+ ++|+ ++|||+|++ +++++++++.
T Consensus 2 ~e~vtG~~i~~~~~----~rR~GD~~~~~Ad-----~~kA~~~LgW~p~~-~L~~~i~~~w 52 (62)
T PF13950_consen 2 FEKVTGKKIPVEYA----PRRPGDPAHLVAD-----ISKAREELGWKPKY-SLEDMIRDAW 52 (62)
T ss_dssp HHHHHTS---EEEE-------TT--SEE-B-------HHHHHHC----SS-SHHHHHHHHH
T ss_pred cHHHHCCCCCceEC----CCCCCchhhhhCC-----HHHHHHHhCCCcCC-CHHHHHHHHH
Confidence 45667765332222 2345655554444 4555 579999999 6999999864
|
... |
| >PRK06901 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.014 Score=49.89 Aligned_cols=67 Identities=12% Similarity=0.082 Sum_probs=40.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe---EEEEecC-CCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ---VRVLTRS-RSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~---V~~~~r~-~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.| ||||.+|+.+++.|.++++. ++.+... .+..+...-. ...+.+.+.+ ...++++|++|. ++
T Consensus 3 ~~~iAi-GATg~VG~~~l~~Leer~fpv~~l~l~~s~~~s~gk~i~f~-----g~~~~V~~l~--~~~f~~vDia~f-ag 73 (322)
T PRK06901 3 TLNIAI-AAEFELSEKLLEALEQSDLEIEQISIVEIEPFGEEQGIRFN-----NKAVEQIAPE--EVEWADFNYVFF-AG 73 (322)
T ss_pred cceEEE-ecCcHHHHHHHHHHHhcCCchhheeecccccccCCCEEEEC-----CEEEEEEECC--ccCcccCCEEEE-cC
Confidence 368999 99999999999999999874 4444433 2222211110 0011222211 123578999999 76
|
|
| >PRK06249 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.0047 Score=53.61 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=34.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
|++++|||+|+| .|-+|..++..|.+.|++|+++.|+.
T Consensus 1 ~~~~~m~I~IiG-~GaiG~~lA~~L~~~g~~V~~~~r~~ 38 (313)
T PRK06249 1 MDSETPRIGIIG-TGAIGGFYGAMLARAGFDVHFLLRSD 38 (313)
T ss_pred CCCcCcEEEEEC-CCHHHHHHHHHHHHCCCeEEEEEeCC
Confidence 456778999998 69999999999999999999999976
|
|
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.034 Score=45.17 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=29.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+| .|-+|+.+++.|...|. +++.++.+
T Consensus 27 ~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D 61 (212)
T PRK08644 27 KKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFD 61 (212)
T ss_pred hCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 345899999 59999999999999996 68888876
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0084 Score=53.19 Aligned_cols=68 Identities=19% Similarity=0.231 Sum_probs=49.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..|+|.|+| .|.||+.+++.|..-|.+|.+++|.......... .++.-...+.++++++|+|+.+...
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~---------~g~~~~~~l~ell~~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQE---------LGLTYHVSFDSLVSVCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhHhh---------cCceecCCHHHHhhcCCEEEEcCCC
Confidence 347899999 6999999999999999999999987632211110 1122234688889999999988753
|
|
| >COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.0078 Score=51.94 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=52.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
||+|.|+| .|.+|+-++..-..-|++|++++-+++......... ....+..|++.+.++.+++|+|=.
T Consensus 1 ~~tvgIlG-GGQLgrMm~~aa~~lG~~v~vLdp~~~~PA~~va~~----~i~~~~dD~~al~ela~~~DViT~ 68 (375)
T COG0026 1 MKTVGILG-GGQLGRMMALAAARLGIKVIVLDPDADAPAAQVADR----VIVAAYDDPEALRELAAKCDVITY 68 (375)
T ss_pred CCeEEEEc-CcHHHHHHHHHHHhcCCEEEEecCCCCCchhhcccc----eeecCCCCHHHHHHHHhhCCEEEE
Confidence 46899999 599999999999999999999997765543322211 333555688999999999998853
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.031 Score=49.86 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=29.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
...+|+|+| .|-+|+++++.|+..|. ++++++++
T Consensus 134 ~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 445899998 58899999999999996 78888886
|
|
| >PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.46 E-value=0.01 Score=50.49 Aligned_cols=58 Identities=17% Similarity=0.287 Sum_probs=48.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
....++|.|+|.+|.+|+.++..|+++|++|++..|... ++.++.+++|+||-+.|.
T Consensus 156 ~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-----------------------~l~e~~~~ADIVIsavg~ 212 (301)
T PRK14194 156 DLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-----------------------DAKALCRQADIVVAAVGR 212 (301)
T ss_pred CCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-----------------------CHHHHHhcCCEEEEecCC
Confidence 345679999999999999999999999999999865431 466777889999999885
Q ss_pred C
Q 020476 97 P 97 (325)
Q Consensus 97 ~ 97 (325)
+
T Consensus 213 ~ 213 (301)
T PRK14194 213 P 213 (301)
T ss_pred h
Confidence 4
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.0026 Score=46.24 Aligned_cols=70 Identities=23% Similarity=0.243 Sum_probs=52.1
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|+|+| .|-+|..+++.|.+.+.+|++++++++.......... ....+|..+++.+.++ +++++.|+-+..
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~--~~i~gd~~~~~~l~~a~i~~a~~vv~~~~ 71 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGV--EVIYGDATDPEVLERAGIEKADAVVILTD 71 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTS--EEEES-TTSHHHHHHTTGGCESEEEEESS
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhccc--ccccccchhhhHHhhcCccccCEEEEccC
Confidence 57888 5899999999999977799999999876555443321 1445788888888775 468999998864
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PRK12439 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.016 Score=50.90 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=47.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cC-ce----eecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FP-GV----MIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~-~~----d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+|||.|+| +|.+|..++..|.+.| .|+.+.|+++..+.......... .. .. ++.-.+++.++++++|+||-
T Consensus 6 ~~mkI~IiG-aGa~G~alA~~La~~g-~v~l~~~~~~~~~~i~~~~~~~~~l~~~~~l~~~i~~t~d~~~a~~~aDlVil 83 (341)
T PRK12439 6 REPKVVVLG-GGSWGTTVASICARRG-PTLQWVRSAETADDINDNHRNSRYLGNDVVLSDTLRATTDFAEAANCADVVVM 83 (341)
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCC-CEEEEeCCHHHHHHHHhcCCCcccCCCCcccCCCeEEECCHHHHHhcCCEEEE
Confidence 357999999 5999999999999988 67778887654432221110000 00 11 11122345566789999998
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
+..
T Consensus 84 avp 86 (341)
T PRK12439 84 GVP 86 (341)
T ss_pred EeC
Confidence 853
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.44 E-value=0.015 Score=49.28 Aligned_cols=68 Identities=18% Similarity=0.235 Sum_probs=44.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC--CCeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|+| .|.||+.+++.|.+. ++++.++ +|++++....... +.... -.+++++++.++|+|+-|++
T Consensus 6 ~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~-----~g~~~--~~~~~eell~~~D~Vvi~tp 76 (271)
T PRK13302 6 ELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWG-----LRRPP--PVVPLDQLATHADIVVEAAP 76 (271)
T ss_pred eeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHh-----cCCCc--ccCCHHHHhcCCCEEEECCC
Confidence 46999999 799999999999863 6787755 5554443322211 11011 12345566778999999986
|
|
| >PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF) | Back alignment and domain information |
|---|
Probab=96.43 E-value=0.018 Score=44.26 Aligned_cols=58 Identities=19% Similarity=0.316 Sum_probs=43.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+...++++|+|.+..+|+.|+..|.++|..|+...... .++.+.++++|+||-++|.
T Consensus 33 ~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T-----------------------~~l~~~~~~ADIVVsa~G~ 89 (160)
T PF02882_consen 33 DLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKT-----------------------KNLQEITRRADIVVSAVGK 89 (160)
T ss_dssp STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTS-----------------------SSHHHHHTTSSEEEE-SSS
T ss_pred CCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCC-----------------------CcccceeeeccEEeeeecc
Confidence 34567999999999999999999999998888765322 3566778899999999886
Q ss_pred C
Q 020476 97 P 97 (325)
Q Consensus 97 ~ 97 (325)
+
T Consensus 90 ~ 90 (160)
T PF02882_consen 90 P 90 (160)
T ss_dssp T
T ss_pred c
Confidence 5
|
Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A .... |
| >PRK08229 2-dehydropantoate 2-reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.0045 Score=54.48 Aligned_cols=35 Identities=34% Similarity=0.454 Sum_probs=32.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
|||||.|+| .|.+|..++..|.+.|++|++++|++
T Consensus 1 ~~mkI~IiG-~G~mG~~~A~~L~~~G~~V~~~~r~~ 35 (341)
T PRK08229 1 MMARICVLG-AGSIGCYLGGRLAAAGADVTLIGRAR 35 (341)
T ss_pred CCceEEEEC-CCHHHHHHHHHHHhcCCcEEEEecHH
Confidence 568999999 69999999999999999999999965
|
|
| >PRK13303 L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.029 Score=47.35 Aligned_cols=70 Identities=21% Similarity=0.234 Sum_probs=41.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
||||.|+|. |.+|+.+++.+.+. +.++.++.............. ...+.+. +++.++-.++|+|+.|++.
T Consensus 1 m~rVgIiG~-G~iG~~~~~~l~~~~~~~l~~v~~~~~~~~~~~~~~----~~~~~~~--~d~~~l~~~~DvVve~t~~ 71 (265)
T PRK13303 1 MMKVAMIGF-GAIGAAVLELLEHDPDLRVDWVIVPEHSIDAVRRAL----GEAVRVV--SSVDALPQRPDLVVECAGH 71 (265)
T ss_pred CcEEEEECC-CHHHHHHHHHHhhCCCceEEEEEEcCCCHHHHhhhh----ccCCeee--CCHHHhccCCCEEEECCCH
Confidence 479999996 99999999999876 467666653332221111110 0011222 2233333579999999863
|
|
| >PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0074 Score=54.26 Aligned_cols=71 Identities=15% Similarity=0.146 Sum_probs=51.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
.+|+|+|+| +|.+|..++..+.+.|++|++++.++......... ....+|..|.+.+.++++ ++|+|+...
T Consensus 11 ~~~~ilIiG-~g~~~~~~~~a~~~~G~~v~~~~~~~~~~~~~~ad----~~~~~~~~d~~~l~~~~~~~~id~vi~~~ 83 (395)
T PRK09288 11 SATRVMLLG-SGELGKEVAIEAQRLGVEVIAVDRYANAPAMQVAH----RSHVIDMLDGDALRAVIEREKPDYIVPEI 83 (395)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCchHHhhh----heEECCCCCHHHHHHHHHHhCCCEEEEee
Confidence 357999999 58999999999999999999999877542221110 122356668888888877 899998653
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.0051 Score=47.38 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=30.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEe
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT 51 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~ 51 (325)
....++|+|+|| |-+|...++.|++.|++|++++
T Consensus 10 ~l~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs 43 (157)
T PRK06719 10 NLHNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS 43 (157)
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc
Confidence 445679999995 9999999999999999999885
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.025 Score=48.63 Aligned_cols=98 Identities=19% Similarity=0.203 Sum_probs=65.5
Q ss_pred EECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCC-Cc--cccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 25 VTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGK-KT--RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 25 I~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~-~~--~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
|+|+ |.+|..++..|+..+. ++..+++..+......... .. .......+.. .. .+.++++|+||.+||.+..
T Consensus 1 iIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~i~~-~~-~~~~~daDivVitag~~rk 77 (299)
T TIGR01771 1 IIGA-GNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKKIRS-GD-YSDCKDADLVVITAGAPQK 77 (299)
T ss_pred CCCc-CHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeEEec-CC-HHHHCCCCEEEECCCCCCC
Confidence 4674 9999999999988774 7999998765432211100 00 0011233332 22 3568899999999997522
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
...+..+....|+.-.+.+.+.+++.
T Consensus 78 ---~g~~R~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 78 ---PGETRLELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 23356788889999999999999984
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0091 Score=52.94 Aligned_cols=72 Identities=18% Similarity=0.307 Sum_probs=60.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..+++||+|| |-+|.-+++.|.++| .+|+...|...+...+.... +++....+.+.+.+..+|+||.+.+.+
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~------~~~~~~l~el~~~l~~~DvVissTsa~ 249 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKL------GAEAVALEELLEALAEADVVISSTSAP 249 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHh------CCeeecHHHHHHhhhhCCEEEEecCCC
Confidence 4568999995 999999999999999 68999999988877665532 267777888888899999999998765
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.015 Score=50.62 Aligned_cols=72 Identities=18% Similarity=0.095 Sum_probs=48.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhh-CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI-QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~-~~~d~vi~~a~ 95 (325)
.+|+|+||+|-+|..+++.+...|.+|+++++++++......... ..-+|..+.+. +.+.. .++|+|+++.|
T Consensus 145 ~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~~~~gvd~vld~~g 220 (329)
T cd08294 145 ETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGF---DAVFNYKTVSLEEALKEAAPDGIDCYFDNVG 220 (329)
T ss_pred CEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHCCCCcEEEEECCC
Confidence 489999999999999999888889999999987765444333211 11123223222 22222 36899999976
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=96.37 E-value=0.0054 Score=51.73 Aligned_cols=66 Identities=20% Similarity=0.360 Sum_probs=49.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.++| .|..|..+++.|++.||+|++++|++++........ ++. -.+...++.+++|+||-|-.
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~~------Ga~--~a~s~~eaa~~aDvVitmv~ 66 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAAA------GAT--VAASPAEAAAEADVVITMLP 66 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHHc------CCc--ccCCHHHHHHhCCEEEEecC
Confidence 5899999 899999999999999999999999998843322110 111 22233667788999998865
|
|
| >PRK07679 pyrroline-5-carboxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.0051 Score=52.43 Aligned_cols=67 Identities=18% Similarity=0.209 Sum_probs=46.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC----CeEEEEecCCCc-ccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN----HQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.|||.++| .|.+|..+++.|++.| ++|++.+|+.++ ...+... .++... +...++++++|+||.+.
T Consensus 3 ~mkI~~IG-~G~mG~aia~~l~~~g~~~~~~v~v~~r~~~~~~~~l~~~------~g~~~~--~~~~e~~~~aDvVilav 73 (279)
T PRK07679 3 IQNISFLG-AGSIAEAIIGGLLHANVVKGEQITVSNRSNETRLQELHQK------YGVKGT--HNKKELLTDANILFLAM 73 (279)
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCCCcceEEEECCCCHHHHHHHHHh------cCceEe--CCHHHHHhcCCEEEEEe
Confidence 46999999 7999999999999987 789998886532 2222211 112222 23445677899999986
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
-
T Consensus 74 ~ 74 (279)
T PRK07679 74 K 74 (279)
T ss_pred C
Confidence 4
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.011 Score=54.10 Aligned_cols=41 Identities=17% Similarity=0.361 Sum_probs=36.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 61 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 61 (325)
|++|.|+| .|..|..+++.|+++|++|++.+|++++...+.
T Consensus 1 ~~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~ 41 (470)
T PTZ00142 1 MSDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFV 41 (470)
T ss_pred CCEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 35899999 799999999999999999999999988755543
|
|
| >PRK14620 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.027 Score=49.22 Aligned_cols=35 Identities=26% Similarity=0.454 Sum_probs=31.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
|||.|+|+ |-+|..++..|.+.|++|+.++|+++.
T Consensus 1 MkI~IiGa-Ga~G~ala~~L~~~g~~V~l~~r~~~~ 35 (326)
T PRK14620 1 MKISILGA-GSFGTAIAIALSSKKISVNLWGRNHTT 35 (326)
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCeEEEEecCHHH
Confidence 58999995 999999999999999999999997643
|
|
| >PRK04207 glyceraldehyde-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.039 Score=48.39 Aligned_cols=33 Identities=24% Similarity=0.495 Sum_probs=27.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRS 53 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~ 53 (325)
|+||.|.|. |.+|+.+++.+.++ +.+|+++...
T Consensus 1 ~ikVaI~G~-GrIGr~va~al~~~~d~eLvav~d~ 34 (341)
T PRK04207 1 MIKVGVNGY-GTIGKRVADAVAAQPDMELVGVAKT 34 (341)
T ss_pred CeEEEEECC-CHHHHHHHHHHhcCCCcEEEEEECC
Confidence 469999998 99999999988865 5688887653
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 325 | ||||
| 3oh8_A | 516 | Crystal Structure Of The Nucleoside-Diphosphate Sug | 6e-47 | ||
| 4b4o_A | 298 | Crystal Structure Of Human Epimerase Family Protein | 4e-36 | ||
| 2c29_D | 337 | Structure Of Dihydroflavonol Reductase From Vitis V | 5e-06 | ||
| 3ehe_A | 313 | Crystal Structure Of Udp-Glucose 4 Epimerase (Gale- | 9e-05 |
| >pdb|3OH8|A Chain A, Crystal Structure Of The Nucleoside-Diphosphate Sugar Epimerase From Corynebacterium Glutamicum. Northeast Structural Genomics Consortium Target Cgr91 Length = 516 | Back alignment and structure |
|
| >pdb|4B4O|A Chain A, Crystal Structure Of Human Epimerase Family Protein Sdr39u1 (Isoform2) With Nadph Length = 298 | Back alignment and structure |
|
| >pdb|2C29|D Chain D, Structure Of Dihydroflavonol Reductase From Vitis Vinifera At 1.8 A. Length = 337 | Back alignment and structure |
|
| >pdb|3EHE|A Chain A, Crystal Structure Of Udp-Glucose 4 Epimerase (Gale-1) From Archaeoglobus Fulgidus Length = 313 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} Length = 516 | Back alignment and structure |
|---|
Score = 413 bits (1063), Expect = e-143
Identities = 108/327 (33%), Positives = 160/327 (48%), Gaps = 22/327 (6%)
Query: 1 MDLAASEILLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 60
DL L S +TV++TG+ G +GR L +LQ H+V L R K
Sbjct: 131 EDLKFLS---RTSTLFDGSPLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGKR 187
Query: 61 FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSK 120
F D + G+ +V+LAG PI R++ K+ I+ESR+ T
Sbjct: 188 FWDPLN------------PASDLLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKF 235
Query: 121 VVDLINESPEGVRPSVLVSATALGYYGTSET-EVFDESSPSGNDYLAEVCREWEGTALKV 179
+ +L+ ES + + ++SA+A+G+YG E+ E S SG+D+LAEVCR+WE
Sbjct: 236 LAELVAEST---QCTTMISASAVGFYGHDRGDEILTEESESGDDFLAEVCRDWEHATAPA 292
Query: 180 NKD-VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238
+ R+A IR G+ L GG L + LF GG G G WFSWI +DD+ ++ Y A
Sbjct: 293 SDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRA 352
Query: 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGA--FVVLEG 296
+ + G IN APNPV A+M L + RP+++ +P K +LG + L
Sbjct: 353 IVDAQISGPINAVAPNPVSNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALAS 412
Query: 297 QRVVPARAKELGFPFKYRYVKDALKAI 323
QR PA + L F+Y + A+
Sbjct: 413 QRTAPAALENLSHTFRYTDIGAAIAHE 439
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 7e-31
Identities = 48/312 (15%), Positives = 92/312 (29%), Gaps = 43/312 (13%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
S + + G G +G L +RL A H+V L RS + P
Sbjct: 2 SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQ-------TLIADVTRP 53
Query: 79 Q-WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
+ ++ S + + S + + + +P ++
Sbjct: 54 DTLASIVHLRPEILVYCVAA-----SEYSDEHYRLSYVEGLRNTLSALEGAP--LQHVFF 106
Query: 138 VSATALGYYGTSETEVFDESSP-SGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
VS+T G YG E DE +P D+ + E E + + +R + G
Sbjct: 107 VSST--GVYGQEVEEWLDEDTPPIAKDFSGKRMLEAEALLAAYSSTI----LRFSGIYGP 160
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY---RGVINGTAP 253
+ + + W + IH DD I + S+ + T
Sbjct: 161 GRLRMIRQA-----QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDN 215
Query: 254 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKY 313
P+ + ++ L + G +++ AR G+ Y
Sbjct: 216 QPLPVHDLLRWLADRQGIAYPAGATPPV------------QGNKKLSNARLLASGYQLIY 263
Query: 314 RYVKDALKAIMS 325
A+++
Sbjct: 264 PDYVSGYGALLA 275
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 103 bits (258), Expect = 7e-26
Identities = 65/310 (20%), Positives = 108/310 (34%), Gaps = 34/310 (10%)
Query: 18 ASQMT--VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA 75
++ MT + G G+ R L + L ++ +R+ + E I G
Sbjct: 1 SNAMTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRAS-------GAEPL 52
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135
P + G T ++ G V + + D I R
Sbjct: 53 LWPGEEPSLDGVTHLLISTAPDSGGD--------------PVLAALGDQIAARAAQFRWV 98
Query: 136 VLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLG 195
+S T YG + DE++P R + ++ L + R+ + G
Sbjct: 99 GYLSTT--AVYGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQAVPNLPLHVFRLAGIYG 156
Query: 196 KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNP 255
G +K+ + P Q FS IH++DI ++ +++ P V N P
Sbjct: 157 PGRGPFSKLGKGGIRRIIKP----GQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDDEP 212
Query: 256 VRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFV-VLEGQRVVPARAK-ELGFPFKY 313
V ++ + + G P LP KA L A E +RV R K ELG KY
Sbjct: 213 VPPQDVIAYAAELQGLP--LPPAVDFDKADLTPMARSFYSENKRVRNDRIKEELGVRLKY 270
Query: 314 RYVKDALKAI 323
+ L+A+
Sbjct: 271 PNYRVGLEAL 280
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 94.3 bits (235), Expect = 3e-22
Identities = 42/282 (14%), Positives = 96/282 (34%), Gaps = 31/282 (10%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 77
+ + +V GATG +G + ++A H + ++ R S+ + + + +
Sbjct: 11 GAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQR-LAYLEPECRVA-EMLDH 68
Query: 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
++G V+ AG +E S + T+ ++ V +
Sbjct: 69 AGLERALRGLDGVIFSAGY---YPSRPRRWQEEVASALGQTNPFYAACLQA--RVPRILY 123
Query: 138 VS-ATALGYYG----TSETEVFDESSPSGNDY-----LAEVCRE-WEGTALKVNKDVRLA 186
V A A+ + E +D + Y + + E + +
Sbjct: 124 VGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALD--EQAREQAR----NGLPVV 177
Query: 187 LIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245
+ G+VLG D G + + + G + I + + AL
Sbjct: 178 IGIPGMVLGELDIGPTTGRV-ITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIG 236
Query: 246 G--VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAV 285
++ G + + +A++ + +LG+P+ P+ +A+
Sbjct: 237 ERYLLTG---HNLEMADLTRRIAELLGQPAPQPMSMAMARAL 275
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 87.4 bits (216), Expect = 1e-20
Identities = 37/228 (16%), Positives = 72/228 (31%), Gaps = 23/228 (10%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M ++V GATG G +V + H+V + R KA + ++
Sbjct: 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKA----ADRLGATVATLVKEPLVLT 56
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+ AVV+ P G+ + + +V L+ S ++ +
Sbjct: 57 EADLDSVDAVVDALSVPWGSGRG--------YLHLDFATHLVSLLRNS--DTLAVFILGS 106
Query: 141 TALGYYGTSETEVFDESSPSGND--YLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
+L G + D + + Y + + +E L++N +V I
Sbjct: 107 ASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFPSGP 166
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
L G+ S I ++ I + L +P+
Sbjct: 167 ATSYV-------AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIR 207
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 85.5 bits (212), Expect = 7e-20
Identities = 29/229 (12%), Positives = 72/229 (31%), Gaps = 18/229 (7%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 77
+ + GA+GF+G L+ +V + R K ++ + ++
Sbjct: 2 EKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEH--LKVKKAD-VSSL 58
Query: 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
+ + +G+ AV++ +I + I+V ++D + ++ GV ++
Sbjct: 59 DEVCEVCKGADAVISAFNPGWN-------NPDIYDETIKVYLTIIDGVKKA--GVNRFLM 109
Query: 138 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 197
V + + P + E+ L K++ +
Sbjct: 110 VGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPAADMR-P 168
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
G + + S I ++D + + L +P +
Sbjct: 169 GVRTGRYR-----LGKDDMIVDIVGNSHISVEDYAAAMIDELEHPKHHQ 212
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 77.7 bits (191), Expect = 5e-17
Identities = 28/228 (12%), Positives = 63/228 (27%), Gaps = 25/228 (10%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + + GATG G R+++ + H+V + R+ K +
Sbjct: 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDINI-----LQKDIFDLT 55
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+ VV+ G + E + ++ ++N + ++V
Sbjct: 56 LSDLSDQNVVVDAYGIS----------PDEAEKHVTSLDHLISVLNGT--VSPRLLVVGG 103
Query: 141 TALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
A + + Y A + + I + G
Sbjct: 104 AASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE-PG 162
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
G G+ S+I ++D + + + P++
Sbjct: 163 ERTGDYQIGKDHLLFGSDGN-----SFISMEDYAIAVLDEIERPNHLN 205
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 6e-16
Identities = 32/237 (13%), Positives = 81/237 (34%), Gaps = 38/237 (16%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW 80
M + + G+TG +G+ L++ L ++Q+ R + + + +
Sbjct: 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEM 57
Query: 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140
+ G A++N++G+ K + + + K++ ++ V+ +L+S
Sbjct: 58 AKQLHGMDAIINVSGSG---------GKSLLKVDLYGAVKLMQAAEKA--EVKRFILLST 106
Query: 141 TALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA 200
FD + Y+A+ + L ++ +I+ G + ++
Sbjct: 107 IFSLQPEKWIGAGFD---ALKDYYIAKHFAD---LYLTKETNLDYTIIQPGALTEEEA-- 158
Query: 201 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTAP 253
G + + + + D+ + I E + G + NG
Sbjct: 159 ------------TGLIDINDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGKTA 203
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 8e-15
Identities = 46/264 (17%), Positives = 86/264 (32%), Gaps = 58/264 (21%)
Query: 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA 75
L M V V GA G + R L+ L+ H+ + R+ + + +
Sbjct: 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVA---N 73
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV----TSKVVDLINESPEG 131
E + AVV AG+ T + I + K + + G
Sbjct: 74 LEEDFSHAFASIDAVVFAAGSGPHTG---------ADKTILIDLWGAIKTIQEAEKR--G 122
Query: 132 VRPSVLVSATALGYYGTSETEVFDESSPSGNDYL-----AEVCREWEGTALKVNKDVRLA 186
++ ++VS ++G T D+ + YL A+ LK +
Sbjct: 123 IKRFIMVS--SVG------TVDPDQGPMNMRHYLVAKRLAD-------DELK-RSSLDYT 166
Query: 187 LIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
++R G + ++ + + I D+ +I E + G
Sbjct: 167 IVRPGPLSNEESTGKVTVS-----------PHFSEITRSITRHDVAKVIAELVDQQHTIG 215
Query: 247 ----VINGTAPNPVRLAEMCDHLG 266
V+NG P +A++ + LG
Sbjct: 216 KTFEVLNGDTP----IAKVVEQLG 235
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 2e-14
Identities = 43/270 (15%), Positives = 83/270 (30%), Gaps = 35/270 (12%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIA 75
A+ TV VTGA+G G+ + ++L+ + + L RS E I I
Sbjct: 2 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGD---IT 58
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWS---SEIKKEIKESRIRVTSKVVD------LIN 126
+ QG A+V L + ++ + + VD I+
Sbjct: 59 DADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQID 118
Query: 127 ESPE-GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRL 185
+ GV+ V+V ++G + + L + L +
Sbjct: 119 AAKVAGVKHIVVVG--SMG----GTNPDHPLNKLGNGNILVW--KRKAEQYLA-DSGTPY 169
Query: 186 ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245
+IR G +L K+GG ++ + + D+ + +AL +
Sbjct: 170 TIIRAGGLLDKEGGVRELLVGKDDELLQTDTKT-------VPRADVAEVCIQALLFEEAK 222
Query: 246 G----VINGTAPNPVRLAEMCDHLGNVLGR 271
+ + + V R
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 71.7 bits (175), Expect = 3e-14
Identities = 43/288 (14%), Positives = 87/288 (30%), Gaps = 38/288 (13%)
Query: 25 VTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 79
+ G TG IG L + L + +V + R A + I++
Sbjct: 6 IVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPA--WHEDNPINYVQCD-ISDPDD 62
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ + T V ++ S+E +E E+ ++ V+D + + ++ + +
Sbjct: 63 SQAKLSPLTDVTHVFYV-TWANRSTE--QENCEANSKMFRNVLDAVIPNCPNLK-HISLQ 118
Query: 140 ATALGYYGTSETEV--------FDESSP---SGNDYLAEVCREWEGTALKVNKDVRLALI 188
Y G E+ + E P N Y E + + ++
Sbjct: 119 TGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDLEDIMLEEVE--KKEGLTWSVH 176
Query: 189 RIGIVLGKDGGALAKMIPLFMMFA------GGPL---GSGQQWFSWIHLDDIVNLIYE-- 237
R G + G ++ ++ ++A G L G W + D +
Sbjct: 177 RPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHI 236
Query: 238 -ALSNPSYRG-VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALK 283
A +P + N + + + L G LK
Sbjct: 237 WAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLK 284
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 4e-14
Identities = 60/326 (18%), Positives = 115/326 (35%), Gaps = 59/326 (18%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------LIFPGKKTR--FFPGVM 73
V VTG TGF+G +++ L + + V R+ + + PG + FF
Sbjct: 3 RVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNAD- 61
Query: 74 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
++ + I+G + + A +PI SE ++ + + + ++ S V+
Sbjct: 62 LSNPDSFAAAIEGCVGIFHTA-SPIDFA-VSEPEEIVTKRTVDGALGILKACVNSK-TVK 118
Query: 134 PSVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTAL 177
+ S+ + + + +V DES P G +Y LAE + L
Sbjct: 119 RFIYTSSGSAVSFNGKDKDVLDESDWSDVDLLRSVKPFGWNYAVSKTLAE--KA----VL 172
Query: 178 KVNKDVRLALIRI--GIVLGKDGGALAKMIP-----LFMMFAGGPLGSGQQWFSWIHLDD 230
+ + + ++ + ++ G + +P ++ G G F +H+DD
Sbjct: 173 EFGEQNGIDVVTLILPFIV---GRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDD 229
Query: 231 IVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLG 287
+ L N G +P V + EM L PE+ + V
Sbjct: 230 VARAHIYLLENSV----PGGRYNCSPFIVPIEEMSQLLSAKY--------PEYQILTVDE 277
Query: 288 EGAFVVLEGQRVVPARAKELGFPFKY 313
+ + + GF FKY
Sbjct: 278 LKEIKGARLPDLNTKKLVDAGFDFKY 303
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} Length = 311 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 5e-13
Identities = 48/273 (17%), Positives = 92/273 (33%), Gaps = 48/273 (17%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI-AEEPQ 79
+ ++VTG TGF+G+ +V+ ++ D + +LTRS K + +
Sbjct: 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIG-------NKAINDYEYRVSDYTLED 55
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVL 137
+ + AVV+LA T G++ I E T + D E+ + V
Sbjct: 56 LINQLNDVDAVVHLAATR-GSQGK------ISEFHDNEILTQNLYDACYEN--NISNIVY 106
Query: 138 VSATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLA 186
S + Y + ++E +++ + K + +
Sbjct: 107 ASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGNIYSR--------KKGLCIK 156
Query: 187 LIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSN 241
+R + G MI F F G L + +++ D + AL
Sbjct: 157 NLRFAHLYGF-NEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQ 215
Query: 242 PSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 273
G N G+ + + E+ + + N G
Sbjct: 216 EKVSGTFNIGSG-DALTNYEVANTINNAFGNKD 247
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 65.6 bits (160), Expect = 1e-12
Identities = 41/247 (16%), Positives = 77/247 (31%), Gaps = 27/247 (10%)
Query: 3 LAASEILLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP 62
+A +E L + +V + GA+G GR L++ + +V R K
Sbjct: 1 MAETEALSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE 60
Query: 63 GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVV 122
K V + + QG +GT + K
Sbjct: 61 AYKNVNQEVVDFEKLDDYASAFQGHDVGFCC----LGTTRGKAGAEGFVRVDRDYVLKSA 116
Query: 123 DLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKD 182
+L G + L+S+ G ++ S YL +V E E ++ D
Sbjct: 117 ELAKA--GGCKHFNLLSS-----KGADKS--------SNFLYL-QVKGEVEAKVEELKFD 160
Query: 183 VRLALIRIGIVLGKDGG--ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240
R ++ R G++L ++ F SG + + +V + +
Sbjct: 161 -RYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGH----SVPVVTVVRAMLNNVV 215
Query: 241 NPSYRGV 247
P + +
Sbjct: 216 RPRDKQM 222
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 2e-12
Identities = 17/84 (20%), Positives = 30/84 (35%), Gaps = 12/84 (14%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---- 74
+ +++ GATG G + + ++V VL R S+ P +
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGP-------RPAHVVVGD 54
Query: 75 AEEPQW-RDCIQGSTAVVNLAGTP 97
+ + G AV+ L GT
Sbjct: 55 VLQAADVDKTVAGQDAVIVLLGTR 78
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 63.8 bits (156), Expect = 1e-11
Identities = 69/324 (21%), Positives = 114/324 (35%), Gaps = 56/324 (17%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTR--FFPGVMI 74
TV VTGA+GFIG LV RL + VR R + + + P +T + +
Sbjct: 7 TVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKAD-L 65
Query: 75 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 134
A+E + + I+G T V ++A TP+ S + + E+ + I ++ + VR
Sbjct: 66 ADEGSFDEAIKGCTGVFHVA-TPMDFE-SKDPENEVIKPTIEGMLGIMKSCAAAK-TVRR 122
Query: 135 SVLVSATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEGTALK 178
V S+ + V+DES + Y LAE + A K
Sbjct: 123 LVFTSSAGTVNIQEHQLPVYDESCWSDMEFCRAKKMTAWMYFVSKTLAE--QA----AWK 176
Query: 179 VNKDVRLALIRI--GIVLG----KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232
K+ + I I +V+G L + S + ++HLDD+
Sbjct: 177 YAKENNIDFITIIPTLVVGPFIMSSMPPSLITA-LSPITGNEAHYSIIRQGQFVHLDDLC 235
Query: 233 NLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG 289
N NP G + + + ++ L P +P
Sbjct: 236 NAHIYLFENPK----AEGRYICSSHDCIILDLAKMLREKY--PE-YNIPTEFKGVDENLK 288
Query: 290 AFVVLEGQRVVPARAKELGFPFKY 313
+ + +LGF FKY
Sbjct: 289 SV------CFSSKKLTDLGFEFKY 306
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A Length = 369 | Back alignment and structure |
|---|
Score = 60.7 bits (147), Expect = 1e-10
Identities = 50/270 (18%), Positives = 89/270 (32%), Gaps = 53/270 (19%)
Query: 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 79
M + +TGA GF+G+ L L + +H + + R + EL
Sbjct: 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKEEEL-------------------- 40
Query: 80 WRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
+ + +V+LAG E KE + V+D++ + +P++L+S
Sbjct: 41 -ESALLKADFIVHLAGVN-----RPEHDKEFSLGNVSYLDHVLDILTRN--TKKPAILLS 92
Query: 140 ATALGYYGTSETEVFDESSPSGND-YLAE-VCREWEGTALKVNKDVRLALIRIGIVLGKD 197
S + +P G E + RE+ + + R + GK
Sbjct: 93 ---------SSI-QATQDNPYGESKLQGEQLLREYAE-----EYGNTVYIYRWPNLFGKW 137
Query: 198 G-GALAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYR--GVING 250
+I F + + + ++DDIV I A+ GV
Sbjct: 138 CKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV 197
Query: 251 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEF 280
V L E+ D L +P+
Sbjct: 198 PNVFKVTLGEIVDLLYKFKQSRLDRTLPKL 227
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 60.1 bits (146), Expect = 1e-10
Identities = 46/243 (18%), Positives = 74/243 (30%), Gaps = 54/243 (22%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 84
VTGA G +GR + +RL +R+ S G +A+ +
Sbjct: 8 VTGAAGQLGRVMRERLAPMAEILRLADLSPLDP----AGPNEECVQC-DLADANAVNAMV 62
Query: 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS-ATAL 143
G +V+L G + + +I + I + + G V S +
Sbjct: 63 AGCDGIVHLGGISVEKPFE-----QILQGNIIGLYNLYEAARAH--GQPRIVFASSNHTI 115
Query: 144 GYYGTSETEVFDESSP-----------SGNDYLAEVCREWEGTALKVNKDVRLALIRIGI 192
GYY +TE P + LA + + G AL+RIG
Sbjct: 116 GYYP--QTERLGPDVPARPDGLYGVSKCFGENLARMYFDKFG--------QETALVRIGS 165
Query: 193 VLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGT 251
+ + +W DD V+LI P V+ G
Sbjct: 166 CT-------------------PEPNNYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGA 206
Query: 252 APN 254
+ N
Sbjct: 207 SAN 209
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-10
Identities = 58/338 (17%), Positives = 108/338 (31%), Gaps = 71/338 (21%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKT-RFFPGV 72
+ T V G TGF+ LV+ L + V R + + + F
Sbjct: 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRAD 67
Query: 73 MIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV 132
+ +E + I G V ++A TP+ S + + ++ + I+ V+ + V
Sbjct: 68 -LTDELSFEAPIAGCDFVFHVA-TPVHFA-SEDPENDMIKPAIQGVVNVMKACTRAK-SV 123
Query: 133 RPSVLVS--ATALGYYGTSETEVFDESS-----------PSGNDY-----LAEVCREWEG 174
+ +L S A V DE + P Y LAE +
Sbjct: 124 KRVILTSSAAAVTINQLDGTGLVVDEKNWTDIEFLTSAKPPTWGYPASKTLAE--KA--- 178
Query: 175 TALKVNKDVRLALIRI--GIVLG----KDGGALAKMI--------PLFMMFAGGPLGSGQ 220
A K ++ + LI + ++ G D + + L G + SG
Sbjct: 179 -AWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG- 236
Query: 221 QWFSWIHLDDIVNLIYEALSNPSYRGVING---TAPNPVRLAEMCDHLGNVLGRPSWLPV 277
S H++D+ S +G + E+ L
Sbjct: 237 -SVSIAHVEDVCRAHIFVAEKES----ASGRYICCAANTSVPELAKFLSKRY-------- 283
Query: 278 PEFALKAVLGEGAFVVLEGQRVVPA--RAKELGFPFKY 313
P++ + G+ +++ + + + GF FKY
Sbjct: 284 PQYKVPTDFGD----FPPKSKLIISSEKLVKEGFSFKY 317
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 59.9 bits (145), Expect = 2e-10
Identities = 46/296 (15%), Positives = 88/296 (29%), Gaps = 61/296 (20%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI- 74
S+ + + GATG+IGR + + H +L R + + + F G I
Sbjct: 2 GSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIV 61
Query: 75 ----AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 130
+ + ++ V++ G+ +I ++ I E
Sbjct: 62 HGSIDDHASLVEAVKNVDVVISTVGSL----------------QIESQVNIIKAIKEV-- 103
Query: 131 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLAL--- 187
G S GND E + +V VR A+
Sbjct: 104 GTVKRFFPSE-------------------FGNDVDNVHAVEPAKSVFEVKAKVRRAIEAE 144
Query: 188 ------IRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEA 238
+ G +LA+ LG G ++ +DI +A
Sbjct: 145 GIPYTYVSSNCFAGYFLRSLAQ--AGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKA 202
Query: 239 LSNPSY--RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 291
+ +P + + N + L E+ + + VPE + ++ + F
Sbjct: 203 VDDPRTLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 258
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* Length = 377 | Back alignment and structure |
|---|
Score = 58.1 bits (141), Expect = 9e-10
Identities = 50/289 (17%), Positives = 90/289 (31%), Gaps = 45/289 (15%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAE 76
+ V V G GF+G LV+RL +QV V+ ++ + RF I +
Sbjct: 31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSET-SITD 89
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRP 134
+ V +LA G + S I + + T K+ + + + ++
Sbjct: 90 DALLASLQDEYDYVFHLAT-YHGNQSS--IHDPLADHENNTLTTLKLYERLKHF-KRLKK 145
Query: 135 SVLVSATALGYYGT-----SETEVFDESSPSGND-------YLAEV-CREWEGTALKVNK 181
V +A TE D S ND E +
Sbjct: 146 VVYSAAGCS-IAEKTFDDAKATEETDIVSLHNNDSPYSMSKIFGEFYSVYYHKQH----- 199
Query: 182 DVRLALIRI------------GIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFS 224
+ R G G + P F+ G PL G
Sbjct: 200 QLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRD 259
Query: 225 WIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 273
+I ++D+ N + ++ + GV N + +A++ + + G +
Sbjct: 260 FIFVEDVANGLIACAADGTPGGVYNIASGKETSIADLATKINEITGNNT 308
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 57.6 bits (139), Expect = 9e-10
Identities = 47/289 (16%), Positives = 97/289 (33%), Gaps = 42/289 (14%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-GVMIAE 76
+ V + G TG+IG+R+V + H VL R + + F G + E
Sbjct: 2 DKKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIE 61
Query: 77 -----EPQWRDCIQGSTAVVN-LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 130
+ D ++ V++ LAG + ++ K+V+ I E+
Sbjct: 62 ASLDDHQRLVDALKQVDVVISALAGGVLSHHILEQL-------------KLVEAIKEA-- 106
Query: 131 GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYL--AEVCREWEGTALKVNKDVRLALI 188
G L S +G + P ++ +V R E ++ +
Sbjct: 107 GNIKRFLPSE-----FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPY------TYV 155
Query: 189 RIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-- 243
+ G G+LA++ MM G G W+ DD+ +++ +P
Sbjct: 156 SSNMFAGYFAGSLAQL-DGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTL 214
Query: 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAF 291
+ + N + E+ + + + + A + + ++
Sbjct: 215 NKTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 263
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 57.1 bits (138), Expect = 1e-09
Identities = 15/89 (16%), Positives = 25/89 (28%), Gaps = 13/89 (14%)
Query: 15 LLQASQMTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM 73
Q V + GA G I R ++ +L + + R +K +P
Sbjct: 18 YFQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYP-------TNSQ 70
Query: 74 IAE-----EPQWRDCIQGSTAVVNLAGTP 97
I + +QG V
Sbjct: 71 IIMGDVLNHAALKQAMQGQDIVYANLTGE 99
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 55.8 bits (135), Expect = 2e-09
Identities = 16/89 (17%), Positives = 28/89 (31%), Gaps = 6/89 (6%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE 76
++ V + GATG G L+ R+ ++ +V+ +R L + +
Sbjct: 2 HSTPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARK--ALAEHPR----LDNPVGPL 55
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSE 105
GT I S E
Sbjct: 56 AELLPQLDGSIDTAFCCLGTTIKEAGSEE 84
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} Length = 321 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 2e-08
Identities = 46/280 (16%), Positives = 85/280 (30%), Gaps = 53/280 (18%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKTRFFPGVMI 74
+ + +TG GFIG L + L A +V VL E +
Sbjct: 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGTGKFLEKPVLELEER 65
Query: 75 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIK-ESRIRVTSKVVDLINESPEGVR 133
+ V +LA S K+ + + ++ L GV
Sbjct: 66 D--------LSDVRLVYHLAS-HKSVPRS--FKQPLDYLDNVDSGRHLLALCTSV--GVP 112
Query: 134 PSVLVSATALGYYGTSETEVFDESSPSG-----------NDYLAEVCREWEGTALKVNKD 182
V+ S + YG ++T E SP + +A + +
Sbjct: 113 KVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEMVAGAHQRASVA-----PE 165
Query: 183 VRLALIRIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNL 234
V + R V G + +P + L G G+Q + ++ D+V+
Sbjct: 166 VGIV--RFFNVYGPGERPDAL----VPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDK 219
Query: 235 IYEALSNPSYRGVIN-GTAPNPVRLAEMCDHLGNVLGRPS 273
+ + P V+N G+ + + ++ L
Sbjct: 220 LVALANRPLP-SVVNFGS-GQSLSVNDVIRILQATSPAAE 257
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 51.5 bits (124), Expect = 1e-07
Identities = 9/43 (20%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 21 MTVSVTGATGFIGRRLVQRL-QADNHQVRVLTRSRSKAELIFP 62
M + +TGATG +G + + + R+ K +
Sbjct: 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWR 43
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 51.6 bits (123), Expect = 1e-07
Identities = 45/336 (13%), Positives = 86/336 (25%), Gaps = 73/336 (21%)
Query: 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-----E 77
V + GATGFIG+ + + +L R ++ K G +I +
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72
Query: 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
++ + + T I +I +V + G L
Sbjct: 73 EAMEKILKEHEIDIV-----VSTVGGESILDQI---------ALVKAMKAV--GTIKRFL 116
Query: 138 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGI--VLG 195
S G+D E + + VR + GI
Sbjct: 117 PSE-------------------FGHDVNRADPVEPGLNMYREKRRVRQLVEESGIPFTYI 157
Query: 196 KDGGALAKMIP-LFMMFAGGP-------LGSGQQWFSWIHLDDIVNLIYEALSNPSY--R 245
+ P G G ++ DI + + + +
Sbjct: 158 CCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRTLNK 217
Query: 246 GVINGTAPNPVRLAEMCDHLGNVLGRPSW---------------LPVPEFALKA----VL 286
V + N + + E+ +GR +P+ + A +
Sbjct: 218 SVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDLLAAAGENIIPQSVVAAFTHDIF 277
Query: 287 GEGAFVVLEGQRVVPARAKELGFP-FKYRYVKDALK 321
+G V L +P +R V++
Sbjct: 278 IKGCQVNFSIDGPEDVEVTTL-YPEDSFRTVEECFG 312
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 50.4 bits (121), Expect = 2e-07
Identities = 41/245 (16%), Positives = 74/245 (30%), Gaps = 58/245 (23%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 83
VTGA G +G + L H+VR+ AE +A+ D
Sbjct: 7 VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE-----EIVAC-DLADAQAVHDL 60
Query: 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143
++ +++L G + W +I ++ I + + G ++ +++
Sbjct: 61 VKDCDGIIHLGGVSVERPW-----NDILQANIIGAYNLYEAARNL--GKP-RIVFASSNH 112
Query: 144 GYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALIRIGI 192
T D P + LA + + IRIG
Sbjct: 113 TIGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLASLYYHKFD--------IETLNIRIGS 164
Query: 193 VLGK--DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVIN 249
K D +A +W+ +DD + L+ A P V+
Sbjct: 165 CFPKPKDARMMA---------------------TWLSVDDFMRLMKRAFVAPKLGCTVVY 203
Query: 250 GTAPN 254
G + N
Sbjct: 204 GASAN 208
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 49.6 bits (119), Expect = 4e-07
Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)
Query: 21 MTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 62
+++VTGATG +G ++Q L Q+ + R+ KA +
Sbjct: 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD 44
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 49.5 bits (118), Expect = 5e-07
Identities = 50/344 (14%), Positives = 87/344 (25%), Gaps = 81/344 (23%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFP-----GVM 73
++ + + G TG IGR +V + L R A P K GV+
Sbjct: 1 TENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAA--NPETKEELIDNYQSLGVI 58
Query: 74 IAE-----EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128
+ E I+ V+ AG + I K++ I E+
Sbjct: 59 LLEGDINDHETLVKAIKQVDIVICAAGRLL----------------IEDQVKIIKAIKEA 102
Query: 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI 188
G S G D E + +R +
Sbjct: 103 --GNVKKFFPSE-------------------FGLDVDRHDAVEPVRQVFEEKASIRRVIE 141
Query: 189 RIGI--VLGKDGGALAKMIPLFMMFAGGPL--------GSGQQWFSWIHLDDIVNLIYEA 238
G+ + G G +++ D+ A
Sbjct: 142 AEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRA 201
Query: 239 LSNP--SYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF---- 291
++P + V N + E+ +G+ V E + + E +F
Sbjct: 202 ANDPNTLNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEEQVLKDIQESSFPHNY 261
Query: 292 -------VVLEGQRVVPAR------AKELGFP-FKYRYVKDALK 321
++G V A E +P Y + L
Sbjct: 262 LLALYHSQQIKGDAVYEIDPAKDIEASEA-YPDVTYTTADEYLN 304
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 48.1 bits (114), Expect = 9e-07
Identities = 12/93 (12%), Positives = 26/93 (27%), Gaps = 13/93 (13%)
Query: 18 ASQMT--VSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMI 74
++ M +++ GA G I + L L + + + R + V +
Sbjct: 1 SNAMYXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRI----PPEIIDHERVTV 56
Query: 75 AE-----EPQWRDCIQGSTAV-VNLAGTPIGTR 101
E + + V V +
Sbjct: 57 IEGSFQNPGXLEQAVTNAEVVFVGAMESGSDMA 89
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* Length = 351 | Back alignment and structure |
|---|
Score = 48.8 bits (117), Expect = 9e-07
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 13/95 (13%)
Query: 11 TFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-----------LTRSRSKAEL 59
+ L S T +TG GFIG L+++L N V L ++
Sbjct: 16 EITQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVST 75
Query: 60 IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94
+ F G I + ++G V++ A
Sbjct: 76 E-QWSRFCFIEG-DIRDLTTCEQVMKGVDHVLHQA 108
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 1e-06
Identities = 35/145 (24%), Positives = 57/145 (39%), Gaps = 13/145 (8%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVM-IA 75
V VTGA GF+ +V++L ++VR RS SK V +
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72
Query: 76 EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135
++ + + I+G+ V ++A + + S E+ I T + +P V+
Sbjct: 73 KQGAYDEVIKGAAGVAHIA-SVVS---FSNKYDEVVTPAIGGTLNALRAAAATP-SVKRF 127
Query: 136 VLVS--ATALGYYGTSETEVFDESS 158
VL S +AL E DE S
Sbjct: 128 VLTSSTVSALIPKPNVEGIYLDEKS 152
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 48.4 bits (115), Expect = 1e-06
Identities = 44/285 (15%), Positives = 88/285 (30%), Gaps = 55/285 (19%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE----- 76
+ + G TG+IG +V+ H V TR S + ++ G +I +
Sbjct: 13 KILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSL---GAIIVKGELDE 69
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
+ + ++ V++ P +I K+++ I + G
Sbjct: 70 HEKLVELMKKVDVVISALAFP----------------QILDQFKILEAIKVA--GNIKRF 111
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGI--VL 194
L S F G + ++ + +R A+ I
Sbjct: 112 LPSD-------------F------GVEEDRINALPPFEALIERKRMIRRAIEEANIPYTY 152
Query: 195 GKDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP--SYRGV 247
+ I + G+G+ F+ + DI + ++P R V
Sbjct: 153 VSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALNRVV 212
Query: 248 INGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 291
I + N + E+ +G+ + VPE + A+ E
Sbjct: 213 IYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEEIVALTKELPE 257
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 47.9 bits (114), Expect = 2e-06
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57
T++V GATG G L++ A H VR S
Sbjct: 7 TIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL 42
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 46.5 bits (110), Expect = 4e-06
Identities = 17/88 (19%), Positives = 33/88 (37%), Gaps = 8/88 (9%)
Query: 18 ASQMT-VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMI 74
S M + + G TG+IG+ +V+ + +H + R + + F GV I
Sbjct: 1 GSHMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTI 60
Query: 75 AE-----EPQWRDCIQGSTAVVNLAGTP 97
E + ++ V++ P
Sbjct: 61 IEGEMEEHEKMVSVLKQVDIVISALPFP 88
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* Length = 352 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 5e-06
Identities = 17/93 (18%), Positives = 31/93 (33%), Gaps = 9/93 (9%)
Query: 11 TFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL----TRSRSKAELIFPGKKT 66
+ L A +TG GFIG L++ L + +V L T + + +
Sbjct: 18 ELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE 77
Query: 67 RFFPGVM-----IAEEPQWRDCIQGSTAVVNLA 94
+ + I + G V++ A
Sbjct: 78 KQWSNFKFIQGDIRNLDDCNNACAGVDYVLHQA 110
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 6e-06
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
V +TG G IG + + L +V +
Sbjct: 22 KKVFITGICGQIGSHIAELLLERGDKVVGI 51
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 40.7 bits (96), Expect = 4e-04
Identities = 14/81 (17%), Positives = 30/81 (37%), Gaps = 6/81 (7%)
Query: 204 MIPLFM--MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN-GTAPNPVRLAE 260
+P+F + G + ++ + D+ A+ + G + + V + E
Sbjct: 198 PLPIFFQRLSEGKKCFVTKARRDFVFVKDLARATVRAVDGVGH-GAYHFSSG-TDVAIKE 255
Query: 261 MCDHLGNVLGRPSWLPVPEFA 281
+ D + + PS P PE
Sbjct: 256 LYDAVVEAMALPS-YPEPEIR 275
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 6e-06
Identities = 11/40 (27%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 25 VTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKAELIFP 62
+TGATG +G +++ L Q+ + R+ +KA+ +
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA 43
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 45.8 bits (109), Expect = 7e-06
Identities = 36/274 (13%), Positives = 80/274 (29%), Gaps = 50/274 (18%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDC 83
VTG++G IG LV L + V+ A I F + ++ +
Sbjct: 4 VTGSSGQIGTELVPYLAEKYGKKNVI------ASDIVQRDTGGIKFITLDVSNRDEIDRA 57
Query: 84 IQ--GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRV--TSKVVDLINESPEGVRPSVLVS 139
++ A+ +LAG E K ++ + T +++ + V V++
Sbjct: 58 VEKYSIDAIFHLAGILSAK---GE-KDPALAYKVNMNGTYNILEAAKQH--RV-EKVVIP 110
Query: 140 ATALGYYGTSETEVFDESSPS-----------GNDYLAEVCREWEGTALKVNKDVRLALI 188
+T + + + + + L + E G DVR +
Sbjct: 111 STIGVFGPETPKNKVPSITITRPRTMFGVTKIAAELLGQYYYEKFGL------DVR--SL 162
Query: 189 RIGIVLG---KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS 240
R ++ + + + +++ D + + +
Sbjct: 163 RYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYE 222
Query: 241 NP----SYRGVINGTAPNPVRLAEMCDHLGNVLG 270
R N TA +E+ + +
Sbjct: 223 ADRDKLVLRNGYNVTAYT-FTPSELYSKIKERIP 255
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 1e-05
Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKA 57
+ V V G TG G + + L D +VRV+TR+ K
Sbjct: 3 VDKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKK 43
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* Length = 379 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 12/41 (29%), Positives = 21/41 (51%)
Query: 10 LTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
L + + + +S+TGA GFI + +RL+ + H V
Sbjct: 19 LEREQYWPSENLKISITGAGGFIASHIARRLKHEGHYVIAS 59
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* Length = 330 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPG 71
+ S M + +TG G +G L++ H++ V+ + K E++ P G
Sbjct: 17 RGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEG 72
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} PDB: 3icp_A* 3aw9_A* Length = 312 | Back alignment and structure |
|---|
Score = 43.7 bits (104), Expect = 4e-05
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
M + VTG GFIG LV +L ++V V+
Sbjct: 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVV 30
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* Length = 311 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 6e-05
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
M V VTG GFIG +V+ L A +V VL
Sbjct: 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVL 30
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.5 bits (99), Expect = 1e-04
Identities = 33/214 (15%), Positives = 71/214 (33%), Gaps = 55/214 (25%)
Query: 108 KEIKES-RIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-------- 158
K++++ + ++ + +D I S + V ++ + L + F E
Sbjct: 36 KDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL-FWTLLSKQEEMVQKFVEEVLRINYKFL 94
Query: 159 ----------PSGN--DYLAEVCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMI 205
PS Y+ + R + + +V RL + L + AL ++
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY---LKLRQ---ALLELR 148
Query: 206 PLFMMFAGGPLGSGQQW--------------FS----WIHL--DDIVNLIYEALSN---- 241
P + G LGSG+ W W++L + + E L
Sbjct: 149 PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQ 208
Query: 242 --PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 273
P++ + ++ +R+ + L +L
Sbjct: 209 IDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKP 242
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* Length = 212 | Back alignment and structure |
|---|
Score = 41.4 bits (96), Expect = 2e-04
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 79
M V++ G TG +G+ L RL H++ V +R KAE + + + +
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASITGMKNE 59
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 41.2 bits (97), Expect = 3e-04
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNH 45
M +++ GA G +GR+L QRL D
Sbjct: 15 MHIAIIGAAGMVGRKLTQRLVKDGS 39
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} Length = 313 | Back alignment and structure |
|---|
Score = 39.8 bits (94), Expect = 6e-04
Identities = 10/30 (33%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
+ VTG GFIG +V +L ++++++ V+
Sbjct: 2 SLIVVTGGAGFIGSHVVDKL-SESNEIVVI 30
|
| >2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus} Length = 201 | Back alignment and structure |
|---|
Score = 38.9 bits (90), Expect = 9e-04
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG 63
Q V + G TG G+ L ++ + V +R+ + L+ G
Sbjct: 17 EKQGVVCIFG-TGDFGKSLGLKMLQCGYSVVFGSRNPQVSSLLPRG 61
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 100.0 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 100.0 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 100.0 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 100.0 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 100.0 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 100.0 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 100.0 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 100.0 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 100.0 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 100.0 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 100.0 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 100.0 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 100.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 100.0 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 100.0 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 100.0 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 100.0 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 100.0 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 100.0 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 100.0 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 100.0 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 100.0 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 100.0 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 100.0 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 100.0 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 100.0 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 100.0 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 100.0 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 100.0 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 100.0 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 100.0 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 100.0 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 100.0 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 100.0 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 100.0 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 100.0 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 100.0 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 100.0 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 100.0 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 100.0 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 100.0 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 100.0 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 100.0 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 100.0 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 100.0 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 100.0 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 100.0 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 100.0 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 100.0 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 100.0 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 100.0 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 100.0 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 100.0 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 100.0 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.98 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.97 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.97 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.97 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.97 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.96 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.96 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.96 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.96 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.96 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.94 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.94 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.94 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.94 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.93 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.93 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.93 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.93 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.92 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.92 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.92 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.91 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.9 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.9 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.9 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.89 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.89 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.89 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.89 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.88 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.88 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.88 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.88 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.88 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.88 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.88 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.88 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.87 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.87 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.87 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.87 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.87 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.87 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.87 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.87 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.87 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.86 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.86 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.86 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.86 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.86 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.86 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.86 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.86 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.86 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.86 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.86 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.86 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.86 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.86 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.86 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.86 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.86 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.86 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.86 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.85 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.85 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.85 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.85 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.85 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.85 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.85 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.85 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.85 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.85 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.85 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.85 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.85 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.85 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.85 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.85 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.85 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.85 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.85 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.85 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.85 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.85 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.85 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.85 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.84 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.84 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.84 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.84 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.84 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.84 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.84 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.84 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.84 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.84 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.84 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.84 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.84 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.84 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.84 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.84 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.84 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.84 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.84 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.84 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.84 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.84 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.84 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.83 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.83 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.83 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.83 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.83 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.83 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.83 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.83 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.83 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.83 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.83 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.83 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.83 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.83 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.83 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.83 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.83 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.83 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.83 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.83 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.83 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.83 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.83 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.83 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.83 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.82 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.82 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.82 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.82 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.82 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.82 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.82 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.82 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.82 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.82 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.82 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.82 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.82 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.82 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.82 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.82 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.82 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.82 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.82 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.81 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.81 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.81 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.81 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.81 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.81 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.81 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.81 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.81 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.81 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.81 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.81 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.81 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.81 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.81 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.8 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.8 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.8 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.8 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.8 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.8 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.8 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.8 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.8 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.8 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.8 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.8 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.8 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.8 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.8 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.79 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.79 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.79 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.79 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.79 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.79 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.79 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.79 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.79 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.79 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.78 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.78 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.78 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.78 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.77 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.77 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.77 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.76 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.74 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.74 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.74 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.74 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.74 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.73 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.73 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.73 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.72 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.72 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.72 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.72 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.72 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.71 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.71 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.7 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.7 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.7 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.69 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.69 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.69 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.65 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.64 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.61 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.6 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.58 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.57 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.53 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.34 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.31 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.28 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.25 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.22 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.21 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.19 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.18 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.16 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.15 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 99.11 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.11 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.09 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 99.05 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 98.89 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.81 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.76 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.73 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.66 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 98.65 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 98.62 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.59 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.59 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.58 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.52 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.5 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.41 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.4 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.33 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 98.32 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.31 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 98.3 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.28 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 98.22 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 98.22 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 98.2 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.19 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.15 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 98.15 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 98.14 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 98.13 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 98.13 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 98.11 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.11 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 98.1 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.08 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 98.08 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 98.06 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.02 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 98.0 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 98.0 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.99 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 97.97 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.95 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 97.95 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.94 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.92 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.89 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.88 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.87 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.86 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.85 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 97.83 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.83 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.83 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 97.83 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.81 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.79 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 97.78 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.78 | |
| 4a7p_A | 446 | UDP-glucose dehydrogenase; oxidoreductase, carbohy | 97.73 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.73 | |
| 3ijp_A | 288 | DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, | 97.73 | |
| 2pv7_A | 298 | T-protein [includes: chorismate mutase (EC 5.4.99 | 97.72 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.72 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.72 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.71 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.71 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.7 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 97.7 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 97.69 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.68 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.67 | |
| 3k96_A | 356 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA | 97.66 | |
| 3g79_A | 478 | NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; | 97.66 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 97.66 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 97.64 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.64 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.62 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.61 | |
| 2o3j_A | 481 | UDP-glucose 6-dehydrogenase; structural genomics, | 97.61 | |
| 3qy9_A | 243 | DHPR, dihydrodipicolinate reductase; rossmann fold | 97.61 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.6 | |
| 3pzr_A | 370 | Aspartate-semialdehyde dehydrogenase; NADP, oxidor | 97.6 | |
| 1t4b_A | 367 | Aspartate-semialdehyde dehydrogenase; asadh, HOSR, | 97.59 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.59 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.59 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 97.59 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.58 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 97.57 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 97.57 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.56 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 97.56 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.55 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 97.55 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 97.54 | |
| 3uw3_A | 377 | Aspartate-semialdehyde dehydrogenase; structural g | 97.53 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.53 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.53 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 97.53 | |
| 3tz6_A | 344 | Aspartate-semialdehyde dehydrogenase; asadh, ASD, | 97.53 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.52 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 97.52 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.51 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.51 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.5 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.49 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.49 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.48 | |
| 3d1l_A | 266 | Putative NADP oxidoreductase BF3122; structural ge | 97.47 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.47 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.46 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.45 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.44 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.42 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 97.42 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 97.41 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 97.4 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.39 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.38 | |
| 1yj8_A | 375 | Glycerol-3-phosphate dehydrogenase; SGPP, structur | 97.38 | |
| 1ks9_A | 291 | KPA reductase;, 2-dehydropantoate 2-reductase; PAN | 97.37 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.36 | |
| 2cvz_A | 289 | Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; | 97.35 | |
| 3gt0_A | 247 | Pyrroline-5-carboxylate reductase; structural geno | 97.35 | |
| 3vtf_A | 444 | UDP-glucose 6-dehydrogenase; two discrete alpha/be | 97.35 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 97.35 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.34 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 97.34 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.33 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 97.32 | |
| 4dpk_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.32 | |
| 4dpl_A | 359 | Malonyl-COA/succinyl-COA reductase; dinucleotide b | 97.32 | |
| 1yb4_A | 295 | Tartronic semialdehyde reductase; structural genom | 97.31 | |
| 3hsk_A | 381 | Aspartate-semialdehyde dehydrogenase; candida albi | 97.31 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.3 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.3 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.29 | |
| 2f1k_A | 279 | Prephenate dehydrogenase; tyrosine synthesis, X-RA | 97.29 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.29 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 97.28 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.28 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.27 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.27 | |
| 1u8x_X | 472 | Maltose-6'-phosphate glucosidase; structural genom | 97.26 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.26 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.26 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.26 | |
| 3pid_A | 432 | UDP-glucose 6-dehydrogenase; rossmann fold, oxidor | 97.25 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.25 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.25 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 97.25 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 97.24 | |
| 2g5c_A | 281 | Prephenate dehydrogenase; TYRA, oxidoreductase; HE | 97.24 | |
| 3tri_A | 280 | Pyrroline-5-carboxylate reductase; amino acid bios | 97.24 | |
| 1txg_A | 335 | Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxid | 97.23 | |
| 2yv3_A | 331 | Aspartate-semialdehyde dehydrogenase; aspartate pa | 97.23 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 97.2 | |
| 2raf_A | 209 | Putative dinucleotide-binding oxidoreductase; NP_7 | 97.18 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.18 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.18 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.16 | |
| 2uyy_A | 316 | N-PAC protein; long-chain dehydrogenase, cytokine; | 97.15 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.14 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.13 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 97.12 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.12 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.12 | |
| 4gwg_A | 484 | 6-phosphogluconate dehydrogenase, decarboxylating; | 97.1 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.09 | |
| 2d59_A | 144 | Hypothetical protein PH1109; COA binding, structur | 97.08 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.07 | |
| 1vkn_A | 351 | N-acetyl-gamma-glutamyl-phosphate reductase; TM178 | 97.06 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 97.05 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 97.05 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.04 | |
| 3b1f_A | 290 | Putative prephenate dehydrogenase; enzyme, 4-hydro | 97.02 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 97.02 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.0 | |
| 1np3_A | 338 | Ketol-acid reductoisomerase; A DEEP figure-OF-eigh | 96.99 | |
| 3orq_A | 377 | N5-carboxyaminoimidazole ribonucleotide synthetas; | 96.99 | |
| 2gf2_A | 296 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; struct | 96.98 | |
| 2duw_A | 145 | Putative COA-binding protein; ligand binding prote | 96.96 | |
| 1evy_A | 366 | Glycerol-3-phosphate dehydrogenase; rossmann fold, | 96.96 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.96 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.96 |
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-47 Score=328.42 Aligned_cols=288 Identities=36% Similarity=0.657 Sum_probs=235.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC-
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG- 99 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~- 99 (325)
|||||||||||||++|+++|+++||+|++++|++.+. ++...+...+.++++|+|||+|+....
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~---------------~~~~~~~~~~~l~~~d~vihla~~~i~~ 65 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG---------------RITWDELAASGLPSCDAAVNLAGENILN 65 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT---------------EEEHHHHHHHCCCSCSEEEECCCCCSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC---------------eeecchhhHhhccCCCEEEEeccCcccc
Confidence 7999999999999999999999999999999976432 111112334556899999999985422
Q ss_pred --CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC-chHHHHHHHHHHHH
Q 020476 100 --TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DYLAEVCREWEGTA 176 (325)
Q Consensus 100 --~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~-~y~~k~~~~~~~~~ 176 (325)
..|.......+++.|+.++.++++++++......++|+.||.++ ||...+.+.+|+++..+ .+..+.+.+++...
T Consensus 66 ~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~v--yg~~~~~~~~E~~p~~~~~~~~~~~~~~e~~~ 143 (298)
T 4b4o_A 66 PLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAY--YQPSLTAEYDEDSPGGDFDFFSNLVTKWEAAA 143 (298)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGG--SCCCSSCCBCTTCCCSCSSHHHHHHHHHHHHH
T ss_pred hhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeee--ecCCCCCcccccCCccccchhHHHHHHHHHHH
Confidence 34667778889999999999999999984333334677777777 99988889999888765 34566666666666
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
.....+++++++||+.|||++++....+........+..++++.+.++|+|++|+|+++..+++++...|+||+++++++
T Consensus 144 ~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~~~g~yn~~~~~~~ 223 (298)
T 4b4o_A 144 RLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEANHVHGVLNGVAPSSA 223 (298)
T ss_dssp CCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCC
T ss_pred HhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhCCCCCCeEEEECCCcc
Confidence 66677999999999999999876555554444444555668999999999999999999999999888899999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCCccHHHHHHHhCcc-ceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
|+.|+++.+++.+|++..+++|.+.++..++.. ......++++.++|++++||+|+|++++++|+++++
T Consensus 224 t~~e~~~~ia~~lgrp~~~pvP~~~~~~~~g~~~~~~~l~~~rv~~~kl~~~Gf~f~yp~l~~al~~l~~ 293 (298)
T 4b4o_A 224 TNAEFAQTFGAALGRRAFIPLPSAVVQAVFGRQRAIMLLEGQKVIPRRTLATGYQYSFPELGAALKEIAE 293 (298)
T ss_dssp BHHHHHHHHHHHHTCCCCCCBCHHHHHHHHCHHHHHHHHCCCCBCCHHHHHTTCCCSCCSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCcCCcccCCHHHHHHHhcchhHHHhhCCCEEcHHHHHHCCCCCCCCCHHHHHHHHHH
Confidence 999999999999999988899999888877743 344567889999999999999999999999998863
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-43 Score=305.75 Aligned_cols=281 Identities=21% Similarity=0.230 Sum_probs=223.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
|+|+|||||||||||++|+++|+++|++|++++|++.... +. . ..+..+|+. .+.+.++++++|+|||+|+...
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~-~---~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~ 74 (311)
T 3m2p_A 1 MSLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN-D---YEYRVSDYT-LEDLINQLNDVDAVVHLAATRG 74 (311)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC-------C---CEEEECCCC-HHHHHHHTTTCSEEEECCCCCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC-c---eEEEEcccc-HHHHHHhhcCCCEEEEccccCC
Confidence 4689999999999999999999999999999999844333 22 1 125568888 8999999999999999999753
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
.. ++...+++|+.++.+++++|++ .+++++||+||.++ ||.....+++|+++..+ .| .+|...|....
T Consensus 75 ~~-----~~~~~~~~n~~~~~~ll~a~~~--~~~~r~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 145 (311)
T 3m2p_A 75 SQ-----GKISEFHDNEILTQNLYDACYE--NNISNIVYASTISA--YSDETSLPWNEKELPLPDLMYGVSKLACEHIGN 145 (311)
T ss_dssp SS-----SCGGGTHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCCGGGCSBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred CC-----ChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEccHHH--hCCCCCCCCCCCCCCCCCchhHHHHHHHHHHHH
Confidence 22 3456778999999999999999 78899999999988 99887788899887644 56 78888888887
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
.+..+.+++++++||+.+||++.... .++..+ ....+.++ ++++..++++|++|+|++++.+++++..+++||+
T Consensus 146 ~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~~~~~~~i 224 (311)
T 3m2p_A 146 IYSRKKGLCIKNLRFAHLYGFNEKNN-YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEKVSGTFNI 224 (311)
T ss_dssp HHHHHSCCEEEEEEECEEECSCC--C-CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTTCCEEEEE
T ss_pred HHHHHcCCCEEEEeeCceeCcCCCCC-CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCCCCCeEEe
Confidence 77777899999999999999986532 223322 33445553 6788999999999999999999998876789999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
++++++|+.|+++.+++.+|.+..+ ..+.. .........++++|+++ |||+|++ +++++|+++++
T Consensus 225 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~ 291 (311)
T 3m2p_A 225 GSGDALTNYEVANTINNAFGNKDNLLVKNPN---------ANEGIHSSYMDSSKAKELLDFSTDY-NFATAVEEIHL 291 (311)
T ss_dssp CCSCEECHHHHHHHHHHHTTCTTCEEECSSS---------BCCSCCCBCBCCHHHHHHSCCCCSC-CHHHHHHHHHH
T ss_pred CCCCcccHHHHHHHHHHHhCCCCcceecCCC---------CCCCcCceecCHHHHHHHhCCCccc-CHHHHHHHHHH
Confidence 9999999999999999999987432 22211 11223456778888876 9999999 59999998863
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-43 Score=311.41 Aligned_cols=302 Identities=16% Similarity=0.149 Sum_probs=231.3
Q ss_pred HHHhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---------CccccCceeecCCchhHhh
Q 020476 13 CRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---------KTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 13 ~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---------~~~~~~~~d~~d~~~~~~~ 83 (325)
...|.+++|+|||||||||||++|+++|+++|++|++++|+........... ....+..+|+.|.+.+.++
T Consensus 18 ~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 97 (351)
T 3ruf_A 18 TQQLIFSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV 97 (351)
T ss_dssp HHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH
T ss_pred HhhCCCCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH
Confidence 3446667789999999999999999999999999999999765432111000 0112456899999999999
Q ss_pred hCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC-
Q 020476 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN- 162 (325)
Q Consensus 84 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~- 162 (325)
++++|+|||||+... ......++...+++|+.++.+++++|++ .+++++||+||.++ ||.....+++|+++..+
T Consensus 98 ~~~~d~Vih~A~~~~-~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~ 172 (351)
T 3ruf_A 98 MKGVDHVLHQAALGS-VPRSIVDPITTNATNITGFLNILHAAKN--AQVQSFTYAASSST--YGDHPALPKVEENIGNPL 172 (351)
T ss_dssp TTTCSEEEECCCCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCC
T ss_pred hcCCCEEEECCccCC-cchhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEecHHh--cCCCCCCCCccCCCCCCC
Confidence 999999999999642 2223445677899999999999999999 78899999999998 99888888999887543
Q ss_pred -ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHHcCCCC---CCCcceeeeccHHHHH
Q 020476 163 -DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIV 232 (325)
Q Consensus 163 -~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a 232 (325)
.| .+|...|.....+..+.+++++++||+++||++.... ..+++.+ ....+.++ +++...++++|++|+|
T Consensus 173 ~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva 252 (351)
T 3ruf_A 173 SPYAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVI 252 (351)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHH
Confidence 57 7788888877777776799999999999999975432 1233333 34455554 7788999999999999
Q ss_pred HHHHHHHcCC--CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHH-cC
Q 020476 233 NLIYEALSNP--SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LG 308 (325)
Q Consensus 233 ~a~~~~~~~~--~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg 308 (325)
++++.++..+ ..+++||+++++++|+.|+++.+++.+|.+..+ ..+.. .............++++|+++ ||
T Consensus 253 ~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~d~~k~~~~lG 327 (351)
T 3ruf_A 253 QMNILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIHHIDKLSIK-----YREFRSGDVRHSQADVTKAIDLLK 327 (351)
T ss_dssp HHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTCCC-----E-----EECCCTTCCSBCCBCCHHHHHHHC
T ss_pred HHHHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccccccccccc-----ccCCCCCccceeeeCHHHHHHHhC
Confidence 9999999873 356799999999999999999999999985322 11110 111111123456788888875 99
Q ss_pred CCcccccHHHHHHHHhC
Q 020476 309 FPFKYRYVKDALKAIMS 325 (325)
Q Consensus 309 ~~p~~~~~~~~l~~~~~ 325 (325)
|+|++ +++++|+++++
T Consensus 328 ~~p~~-~~~~~l~~~~~ 343 (351)
T 3ruf_A 328 YRPNI-KIREGLRLSMP 343 (351)
T ss_dssp CCCCC-CHHHHHHHHHH
T ss_pred CCCCC-CHHHHHHHHHH
Confidence 99999 59999998863
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-43 Score=301.90 Aligned_cols=288 Identities=19% Similarity=0.285 Sum_probs=218.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
||+|||||||||||++|+++|+++| .++++++.... ....... ..+..+|+.| +.+.++++++|+|||+|+..
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~~~~~---~~~~~~Dl~~-~~~~~~~~~~d~vih~a~~~- 74 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEFVNEA---ARLVKADLAA-DDIKDYLKGAEEVWHIAANP- 74 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGGSCTT---EEEECCCTTT-SCCHHHHTTCSEEEECCCCC-
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhhcCCC---cEEEECcCCh-HHHHHHhcCCCEEEECCCCC-
Confidence 5699999999999999999999999 55555554333 2222111 1245678888 88999999999999999964
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~ 175 (325)
........+...+++|+.++.++++++++ .+++++||+||.++ ||.....+++|+.+.. ..| .+|...|....
T Consensus 75 ~~~~~~~~~~~~~~~nv~~~~~l~~~~~~--~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 150 (313)
T 3ehe_A 75 DVRIGAENPDEIYRNNVLATYRLLEAMRK--AGVSRIVFTSTSTV--YGEAKVIPTPEDYPTHPISLYGASKLACEALIE 150 (313)
T ss_dssp CCC-CCCCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ChhhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEeCchHH--hCcCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 23445567788999999999999999998 67889999999998 9988888888887654 457 78888888888
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcC-CC---CCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
.+..+.+++++++||+++||++.... .+...+ ....+ .+ ++++.+.++++|++|+|++++.+++.+..+++||+
T Consensus 151 ~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~ni 229 (313)
T 3ehe_A 151 SYCHTFDMQAWIYRFANVIGRRSTHG-VIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGDERVNIFNI 229 (313)
T ss_dssp HHHHHTTCEEEEEECSCEESTTCCCS-HHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCCSSEEEEEC
T ss_pred HHHHhcCCCEEEEeeccccCcCCCcC-hHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccCCCCceEEE
Confidence 87777899999999999999975431 122222 33333 33 37888999999999999999999996656779999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
++++++|+.|+++.+++.+|.++.+..+..... ..+ ......++++|+++|||+|++ +++++|+++++
T Consensus 230 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-~~~-----~~~~~~~d~~k~~~lG~~p~~-~~~e~l~~~~~ 297 (313)
T 3ehe_A 230 GSEDQIKVKRIAEIVCEELGLSPRFRFTGGDRG-WKG-----DVPVMLLSIEKLKRLGWKPRY-NSEEAVRMAVR 297 (313)
T ss_dssp CCSCCEEHHHHHHHHHHHTTCCCEEEEC------------------CCBCCHHHHHHTCCCSC-CHHHHHHHHHH
T ss_pred CCCCCeeHHHHHHHHHHHhCCCCceEECCCccC-Ccc-----ccceeccCHHHHHHcCCCCCC-CHHHHHHHHHH
Confidence 999999999999999999998754433321110 011 122356788889889999999 59999998863
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-42 Score=317.28 Aligned_cols=290 Identities=34% Similarity=0.602 Sum_probs=209.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
+|||||||||||||++|++.|+++|++|++++|+..+... ..+|+. +.+.++++++|+|||||+....
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~~~----------v~~d~~--~~~~~~l~~~D~Vih~A~~~~~ 214 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKPGK----------RFWDPL--NPASDLLDGADVLVHLAGEPIF 214 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCTTC----------EECCTT--SCCTTTTTTCSEEEECCCC---
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCccc----------eeeccc--chhHHhcCCCCEEEECCCCccc
Confidence 6899999999999999999999999999999998765321 123443 3346677899999999997644
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHH-HhcCCCCCCCEEEEeeeeeeeec-CCCCceecCCCCCCCchHHHHHHHHHHH-H
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDL-INESPEGVRPSVLVSATALGYYG-TSETEVFDESSPSGNDYLAEVCREWEGT-A 176 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~-~~~~~~~~~~~v~~Ss~~v~~~g-~~~~~~~~e~~~~~~~y~~k~~~~~~~~-~ 176 (325)
..+....+..++++|+.++.+++++ +++ .+++++||+||.++ || .....+++|+++....++.+.+.+++.. .
T Consensus 215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~--~~~~r~V~~SS~~v--yg~~~~~~~~~E~~~~~~~~y~~~~~~~E~~~~ 290 (516)
T 3oh8_A 215 GRFNDSHKEAIRESRVLPTKFLAELVAES--TQCTTMISASAVGF--YGHDRGDEILTEESESGDDFLAEVCRDWEHATA 290 (516)
T ss_dssp --CCGGGHHHHHHHTHHHHHHHHHHHHHC--SSCCEEEEEEEGGG--GCSEEEEEEECTTSCCCSSHHHHHHHHHHHTTH
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhc--CCCCEEEEeCcceE--ecCCCCCCccCCCCCCCcChHHHHHHHHHHHHH
Confidence 4667778889999999999999999 566 67889999999998 98 5556688998887555544433333322 2
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
+....|++++++||+++||++.+....+...+.......++++.+.++++|++|+|++++.+++++...|+||+++++++
T Consensus 291 ~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~g~~ni~~~~~~ 370 (516)
T 3oh8_A 291 PASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDAQISGPINAVAPNPV 370 (516)
T ss_dssp HHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCTTCCEEEEESCSCCE
T ss_pred HHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCcccCCcEEEECCCCC
Confidence 23346999999999999999854332222222222233457888999999999999999999998877889999999999
Q ss_pred CHHHHHHHHHHHhCCCCCCCccHHHHHHHhCcc--ceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 257 RLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG--AFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
|+.|+++.+++.+|++..+++|.+......+.. ......+.+++++|++++||+|++++++++|+++++
T Consensus 371 s~~el~~~i~~~~g~~~~~~~p~~~~~~~~g~~~~~~~~~~~~~~~~~kl~~lG~~~~~~~l~e~l~~~l~ 441 (516)
T 3oh8_A 371 SNADMTKILATSMHRPAFIQIPSLGPKILLGSQGAEELALASQRTAPAALENLSHTFRYTDIGAAIAHELG 441 (516)
T ss_dssp EHHHHHHHTTC---------------------CCGGGGGGCEEEECCHHHHHTTCCCSCSSHHHHHHHHHT
T ss_pred CHHHHHHHHHHHhCCCCCCCCCHHHHHHHhCCchhHHHhhcCCeechHHHHHCCCCCCCCCHHHHHHHHhC
Confidence 999999999999998876777777666555555 455667788889999999999999779999999874
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.3e-42 Score=295.22 Aligned_cols=289 Identities=21% Similarity=0.245 Sum_probs=219.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|||||||||||||++|+++|+++|++|++++|+++......... ..+..+|+.|.+ +.+++++ |+|||+|+.. ..
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~Dl~d~~-~~~~~~~-d~vih~A~~~-~~ 75 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFVNPS--AELHVRDLKDYS-WGAGIKG-DVVFHFAANP-EV 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGSCTT--SEEECCCTTSTT-TTTTCCC-SEEEECCSSC-SS
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhcCCC--ceEEECccccHH-HHhhcCC-CEEEECCCCC-Cc
Confidence 69999999999999999999999999999999876544332211 124567888988 8888888 9999999964 23
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTAL 177 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~ 177 (325)
.....++...+++|+.++.++++++++ .+++++||+||.++ ||.....+++|+.+.. ..| .+|...|.....+
T Consensus 76 ~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~ 151 (312)
T 3ko8_A 76 RLSTTEPIVHFNENVVATFNVLEWARQ--TGVRTVVFASSSTV--YGDADVIPTPEEEPYKPISVYGAAKAAGEVMCATY 151 (312)
T ss_dssp SGGGSCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHHHHHHH
T ss_pred hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeCcHHH--hCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 445566788899999999999999998 78889999999999 9988888888887753 457 7888888877777
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcC-CC---CCCCcceeeeccHHHHHHHHHHHHcC----CCCCceE
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GP---LGSGQQWFSWIHLDDIVNLIYEALSN----PSYRGVI 248 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~v~v~D~a~a~~~~~~~----~~~~~~~ 248 (325)
..+.+++++++||+++||++.... .+...+ ....+ .+ ++++.+.++++|++|+|++++.++++ ...+++|
T Consensus 152 ~~~~g~~~~~lrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~~ 230 (312)
T 3ko8_A 152 ARLFGVRCLAVRYANVVGPRLRHG-VIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMDAPFLAL 230 (312)
T ss_dssp HHHHCCEEEEEEECEEECTTCCSS-HHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSCCSEEEE
T ss_pred HHHhCCCEEEEeeccccCcCCCCC-hHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccCCCCcEE
Confidence 777799999999999999975431 111222 23333 22 37788999999999999999999987 3356799
Q ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCCCCc-cHHHHHH-HhCccceeeccCcccChhHH-HHcCCCcccccHHHHHHHHhC
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLGRPSWLPV-PEFALKA-VLGEGAFVVLEGQRVVPARA-KELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~k~-~~lg~~p~~~~~~~~l~~~~~ 325 (325)
|+++++++|+.|+++.+.+.+|.+..+.. |...... ..+. .....++++|+ ++|||+|++ +++++|+++++
T Consensus 231 ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~~~~ 304 (312)
T 3ko8_A 231 NVGNVDAVRVLDIAQIVAEVLGLRPEIRLVPSTPDGRGWPGD-----VKYMTLAVTKLMKLTGWRPTM-TSAEAVKKTAE 304 (312)
T ss_dssp EESCSSCEEHHHHHHHHHHHHTCCCEEEEC----------CC-----CSEECBCCHHHHHHHCCCCSS-CHHHHHHHHHH
T ss_pred EEcCCCceeHHHHHHHHHHHhCCCCceeecCccccccCCCCC-----ccccccCHHHHHHHhCCCCCC-CHHHHHHHHHH
Confidence 99999999999999999999998754322 2211111 1111 22356777888 569999999 59999998863
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-42 Score=301.71 Aligned_cols=292 Identities=19% Similarity=0.238 Sum_probs=219.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcc--cccCCCC--CccccCceeecCCchhHhhhCC--CCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--ELIFPGK--KTRFFPGVMIAEEPQWRDCIQG--STA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~~~~~~--~~~~~~~~d~~d~~~~~~~~~~--~d~ 89 (325)
+.+|+|||||||||||++|+++|+++| ++|++++|..... ..+.... ....+..+|+.|.+.+.+++++ +|+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 101 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQV 101 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCE
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCE
Confidence 446799999999999999999999999 6888888765322 1111110 1112446788899999999986 999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC-CCceecCCCCCC--Cch-H
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDESSPSG--NDY-L 165 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~-~~~~~~e~~~~~--~~y-~ 165 (325)
|||+|+... ......++..++++|+.++.+++++|++ .+++++||+||.++ ||.. ...+++|+++.. ..| .
T Consensus 102 Vih~A~~~~-~~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~v~~SS~~v--y~~~~~~~~~~E~~~~~p~~~Y~~ 176 (346)
T 4egb_A 102 IVNFAAESH-VDRSIENPIPFYDTNVIGTVTLLELVKK--YPHIKLVQVSTDEV--YGSLGKTGRFTEETPLAPNSPYSS 176 (346)
T ss_dssp EEECCCCC----------CHHHHHHTHHHHHHHHHHHH--STTSEEEEEEEGGG--GCCCCSSCCBCTTSCCCCCSHHHH
T ss_pred EEECCcccc-hhhhhhCHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEeCchHH--hCCCCcCCCcCCCCCCCCCChhHH
Confidence 999999753 2224456678899999999999999999 78899999999998 9876 456788888764 357 7
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...|.....+..+.+++++++||+.+||++.... .+++.+ ....+.++ +++...++++|++|+|++++.+++
T Consensus 177 sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~ 255 (346)
T 4egb_A 177 SKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-KLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLH 255 (346)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-chHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHh
Confidence 788888877777776799999999999999976433 233332 34455553 778899999999999999999999
Q ss_pred CCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHH
Q 020476 241 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKD 318 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~ 318 (325)
++..+++||+++++++|+.|+++.+.+.+|.+.. +..... .........++++|++ +|||+|++ ++++
T Consensus 256 ~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lG~~p~~-~~~e 325 (346)
T 4egb_A 256 KGRVGEVYNIGGNNEKTNVEVVEQIITLLGKTKKDIEYVTD---------RLGHDRRYAINAEKMKNEFDWEPKY-TFEQ 325 (346)
T ss_dssp HCCTTCEEEECCSCCEEHHHHHHHHHHHHTCCGGGCEEECC-----------CCCSCCCBCCHHHHHHHCCCCCC-CHHH
T ss_pred cCCCCCEEEECCCCceeHHHHHHHHHHHhCCCcccccccCC---------CCCCcceeeccHHHHHHHcCCCCCC-CHHH
Confidence 8876679999999999999999999999998632 211110 0111234557788886 69999999 5999
Q ss_pred HHHHHhC
Q 020476 319 ALKAIMS 325 (325)
Q Consensus 319 ~l~~~~~ 325 (325)
+|+++++
T Consensus 326 ~l~~~~~ 332 (346)
T 4egb_A 326 GLQETVQ 332 (346)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998863
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=292.94 Aligned_cols=266 Identities=17% Similarity=0.171 Sum_probs=210.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC-CCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG-STAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~-~d~vi~~a~~~ 97 (325)
++|+||||| +||||++|++.|+++|++|++++|+++... ... .+..+|+.|.+.+.+++++ +|+|||+|+..
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~---~~~~~Dl~d~~~~~~~~~~~~d~vih~a~~~ 74 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPMP---AGV---QTLIADVTRPDTLASIVHLRPEILVYCVAAS 74 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCCC---TTC---CEEECCTTCGGGCTTGGGGCCSEEEECHHHH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCC---ceEEccCCChHHHHHhhcCCCCEEEEeCCCC
Confidence 357999999 599999999999999999999999876532 111 1556899999999999887 99999999852
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEG 174 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~ 174 (325)
..++...+++|+.++.+++++|++ .+++++||+||.++ ||...+.+++|+++..+ .| .+|...|..
T Consensus 75 ------~~~~~~~~~~n~~~~~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~- 143 (286)
T 3gpi_A 75 ------EYSDEHYRLSYVEGLRNTLSALEG--APLQHVFFVSSTGV--YGQEVEEWLDEDTPPIAKDFSGKRMLEAEAL- 143 (286)
T ss_dssp ------HHC-----CCSHHHHHHHHHHTTT--SCCCEEEEEEEGGG--CCCCCSSEECTTSCCCCCSHHHHHHHHHHHH-
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHhh--CCCCEEEEEcccEE--EcCCCCCCCCCCCCCCCCChhhHHHHHHHHH-
Confidence 244567888999999999999998 78899999999998 99888888999888654 45 556555444
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC---CCCCceEEee
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN---PSYRGVINGT 251 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~---~~~~~~~~~~ 251 (325)
. . . ++++++||+++||++... ++..+ ......+.+...++++|++|+|++++.++++ ...+++||++
T Consensus 144 ~--~--~-~~~~ilR~~~v~G~~~~~---~~~~~--~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~ 213 (286)
T 3gpi_A 144 L--A--A-YSSTILRFSGIYGPGRLR---MIRQA--QTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVT 213 (286)
T ss_dssp G--G--G-SSEEEEEECEEEBTTBCH---HHHHT--TCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred H--h--c-CCeEEEecccccCCCchh---HHHHH--HhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEEe
Confidence 2 2 2 899999999999997542 22222 1111236778899999999999999999988 4567799999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 252 APNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 252 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
+++++|+.|+++.+++.+|.+..+..+. .......++++|++++||+|++++++++|++++
T Consensus 214 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~------------~~~~~~~~d~~k~~~lG~~p~~~~l~e~l~~~~ 274 (286)
T 3gpi_A 214 DNQPLPVHDLLRWLADRQGIAYPAGATP------------PVQGNKKLSNARLLASGYQLIYPDYVSGYGALL 274 (286)
T ss_dssp CSCCEEHHHHHHHHHHHTTCCCCCSCCC------------CBCSSCEECCHHHHHTTCCCSSCSHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHcCCCCCCCCCc------------ccCCCeEeeHHHHHHcCCCCcCCcHHHHHHHHH
Confidence 9999999999999999999875444332 124567788899999999999966999999986
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-42 Score=300.45 Aligned_cols=280 Identities=20% Similarity=0.237 Sum_probs=220.7
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...+|+|||||||||||++|++.|+++|++|++++|++.. ... .+..+|+.|.+.+.++++++|+|||+|+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-----~~~---~~~~~Dl~d~~~~~~~~~~~d~vih~A~~ 87 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-----TGG---EEVVGSLEDGQALSDAIMGVSAVLHLGAF 87 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-----SCC---SEEESCTTCHHHHHHHHTTCSEEEECCCC
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-----CCc---cEEecCcCCHHHHHHHHhCCCEEEECCcc
Confidence 3456799999999999999999999999999999998765 111 14568999999999999999999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC--CCCceecCCCCCC--Cch-HHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--SETEVFDESSPSG--NDY-LAEVCRE 171 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~--~~~~~~~e~~~~~--~~y-~~k~~~~ 171 (325)
. .........++++|+.++.+++++|++ .+++++||+||.++ ||. ....+++|+++.. ..| .+|...|
T Consensus 88 ~---~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 160 (347)
T 4id9_A 88 M---SWAPADRDRMFAVNVEGTRRLLDAASA--AGVRRFVFASSGEV--YPENRPEFLPVTEDHPLCPNSPYGLTKLLGE 160 (347)
T ss_dssp C---CSSGGGHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--TTTTSCSSSSBCTTSCCCCCSHHHHHHHHHH
T ss_pred c---CcchhhHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHH--hCCCCCCCCCcCCCCCCCCCChHHHHHHHHH
Confidence 4 233444588999999999999999999 78899999999998 987 5666888888754 457 7788888
Q ss_pred HHHHHHhhcCCceEEEEEeceEE-------------cCCCCcc----------cchHHHH--HHHcCCCC---CCCccee
Q 020476 172 WEGTALKVNKDVRLALIRIGIVL-------------GKDGGAL----------AKMIPLF--MMFAGGPL---GSGQQWF 223 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~-------------g~~~~~~----------~~~~~~~--~~~~~~~~---~~~~~~~ 223 (325)
.....+..+.+++++++||+++| |++.... ..++..+ ....+.++ +++...+
T Consensus 161 ~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 240 (347)
T 4id9_A 161 ELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPSHILARNENGR 240 (347)
T ss_dssp HHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCCEEEEECTTCC
T ss_pred HHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCeEEeCCCCccc
Confidence 88887777789999999999999 7653221 1223322 33445443 5677788
Q ss_pred ee----ccHHHHHHHHHHHHcCC-CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCc
Q 020476 224 SW----IHLDDIVNLIYEALSNP-SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQ 297 (325)
Q Consensus 224 ~~----v~v~D~a~a~~~~~~~~-~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 297 (325)
++ +|++|+|++++.+++++ ..+++||+++++++|+.|+++.+++.+|.+..+ ..|.. ....
T Consensus 241 ~~~~~~i~v~Dva~ai~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-------------~~~~ 307 (347)
T 4id9_A 241 PFRMHITDTRDMVAGILLALDHPEAAGGTFNLGADEPADFAALLPKIAALTGLPIVTVDFPGD-------------GVYY 307 (347)
T ss_dssp BCEECEEEHHHHHHHHHHHHHCGGGTTEEEEESCSSCEEHHHHHHHHHHHHCCCEEEEECSSC-------------CCBC
T ss_pred CCccCcEeHHHHHHHHHHHhcCcccCCCeEEECCCCcccHHHHHHHHHHHhCCCCceeeCCCc-------------cccc
Confidence 88 99999999999999987 356799999999999999999999999976322 12211 1156
Q ss_pred ccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 298 RVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 298 ~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
.++++|+++ |||+|++ +++++|+++++
T Consensus 308 ~~d~~k~~~~lG~~p~~-~~~~~l~~~~~ 335 (347)
T 4id9_A 308 HTSNERIRNTLGFEAEW-TMDRMLEEAAT 335 (347)
T ss_dssp CBCCHHHHHHHCCCCCC-CHHHHHHHHHH
T ss_pred ccCHHHHHHHhCCCCCC-CHHHHHHHHHH
Confidence 678888865 9999999 59999998863
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=298.52 Aligned_cols=291 Identities=20% Similarity=0.254 Sum_probs=213.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
...+|+|||||||||||++++++|+++| ++|++++|+...............+..+|+.|++.+.++++++|+|||+|+
T Consensus 29 ~~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~ 108 (377)
T 2q1s_A 29 KLANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLAT 108 (377)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCC
T ss_pred HhCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCC
Confidence 3456899999999999999999999999 999999998755322111011112445788899999999999999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCC-CCCCEEEEeeeeeeeecCCCCceec--CCC---C---CCCch-H
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTSETEVFD--ESS---P---SGNDY-L 165 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~-~~~~~v~~Ss~~v~~~g~~~~~~~~--e~~---~---~~~~y-~ 165 (325)
.... .....++...+++|+.++.+++++|++ . +++++||+||.++ ||.....+++ |++ + +...| .
T Consensus 109 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~~~~~~~~E~~~~~~~~~~~~~Y~~ 183 (377)
T 2q1s_A 109 YHGN-QSSIHDPLADHENNTLTTLKLYERLKH--FKRLKKVVYSAAGCS--IAEKTFDDAKATEETDIVSLHNNDSPYSM 183 (377)
T ss_dssp CSCH-HHHHHCHHHHHHHHTHHHHHHHHHHTT--CSSCCEEEEEEEC----------------CCCCCCCSSCCCSHHHH
T ss_pred ccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCCHHH--cCCCCCCCcCcccccccccccCCCCchHH
Confidence 6421 112345678899999999999999998 6 7889999999988 9877666777 776 3 34467 7
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC---------Ccc---cchHHHH--HHHcCCCC---CCCcceeeeccH
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDG---------GAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHL 228 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~---------~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~v~v 228 (325)
+|...|.....+..+.+++++++||+.+||++. ... ..+++.+ ....+.++ ++++..++++|+
T Consensus 184 sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v 263 (377)
T 2q1s_A 184 SKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLENGGVATRDFIFV 263 (377)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSGGGCCEECCEEH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeCCCCeEEeeEEH
Confidence 788888777776666699999999999999976 221 2333332 34455543 567789999999
Q ss_pred HHHHHH-HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeecc-CcccChhHHH
Q 020476 229 DDIVNL-IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE-GQRVVPARAK 305 (325)
Q Consensus 229 ~D~a~a-~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~k~~ 305 (325)
+|+|++ ++.+++++. .|+||+++++++|+.|+++.+.+.+|.+..+ ..|.. .+ ... ...++++|++
T Consensus 264 ~Dva~a~i~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~-----~~-----~~~~~~~~d~~k~~ 332 (377)
T 2q1s_A 264 EDVANGLIACAADGTP-GGVYNIASGKETSIADLATKINEITGNNTELDRLPKR-----PW-----DNSGKRFGSPEKAR 332 (377)
T ss_dssp HHHHHHHHHHHHHCCT-TEEEECCCCCCEEHHHHHHHHHHHHTCCSCCCCCCCC-----GG-----GCC-CCCCCCHHHH
T ss_pred HHHHHHHHHHHHhcCC-CCeEEecCCCceeHHHHHHHHHHHhCCCCCceeCCCC-----cc-----ccccccccCHHHHH
Confidence 999999 999998876 4599999999999999999999999986432 22210 01 122 5677888885
Q ss_pred -HcCCCcccccHHHHHHHHh
Q 020476 306 -ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 306 -~lg~~p~~~~~~~~l~~~~ 324 (325)
+|||+|++ +++++|++++
T Consensus 333 ~~lG~~p~~-~l~e~l~~~~ 351 (377)
T 2q1s_A 333 RELGFSADV-SIDDGLRKTI 351 (377)
T ss_dssp HHHCCCCCC-CHHHHHHHHH
T ss_pred HHcCCCCCC-CHHHHHHHHH
Confidence 69999999 4999999876
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-42 Score=306.62 Aligned_cols=298 Identities=15% Similarity=0.185 Sum_probs=222.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeec-CCchhHhhhCCCCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||+|||||||||||++|+++|+++ |++|++++|+.++........ ...+..+|+. |.+.+.++++++|+|||||+
T Consensus 22 m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~-~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~ 100 (372)
T 3slg_A 22 MKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHE-RMHFFEGDITINKEWVEYHVKKCDVILPLVA 100 (372)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGST-TEEEEECCTTTCHHHHHHHHHHCSEEEECBC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCC-CeEEEeCccCCCHHHHHHHhccCCEEEEcCc
Confidence 34679999999999999999999998 999999999886654432211 1124567988 88999999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---------CCch-H
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-L 165 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---------~~~y-~ 165 (325)
.... .....++...+++|+.++.+++++|++ .+ +++||+||.++ ||.....+++|++++ ...| .
T Consensus 101 ~~~~-~~~~~~~~~~~~~nv~~~~~ll~a~~~--~~-~~~v~~SS~~v--yg~~~~~~~~e~~~~~~~~p~~~p~~~Y~~ 174 (372)
T 3slg_A 101 IATP-ATYVKQPLRVFELDFEANLPIVRSAVK--YG-KHLVFPSTSEV--YGMCADEQFDPDASALTYGPINKPRWIYAC 174 (372)
T ss_dssp CCCH-HHHHHCHHHHHHHHTTTTHHHHHHHHH--HT-CEEEEECCGGG--GBSCCCSSBCTTTCCEEECCTTCTTHHHHH
T ss_pred cccH-HHHhhCHHHHHHHHHHHHHHHHHHHHH--hC-CcEEEeCcHHH--hCCCCCCCCCccccccccCCCCCCCCcHHH
Confidence 6522 112345678889999999999999998 66 89999999988 998877788887743 2257 7
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-------ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHH
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~ 233 (325)
+|...|.....+... +++++++||+++||++... ...++..+ ....+.++ +++...++++|++|+|+
T Consensus 175 sK~~~E~~~~~~~~~-g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ 253 (372)
T 3slg_A 175 SKQLMDRVIWGYGME-GLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQKRAFTYVDDGIS 253 (372)
T ss_dssp HHHHHHHHHHHHHTT-TCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCCEEECEEHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCceEEEEEEHHHHHH
Confidence 788888887777766 9999999999999997532 12233333 34455553 66789999999999999
Q ss_pred HHHHHHcCCC---CCceEEeeC-CCCCCHHHHHHHHHHHhCCCCCCCccHHHH-------HHHhCccceeeccCcccChh
Q 020476 234 LIYEALSNPS---YRGVINGTA-PNPVRLAEMCDHLGNVLGRPSWLPVPEFAL-------KAVLGEGAFVVLEGQRVVPA 302 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 302 (325)
+++.+++++. .+++||+++ ++++|+.|+++.+++.+|.+..+....... ..+.+ ..........++++
T Consensus 254 a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~ 332 (372)
T 3slg_A 254 ALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPEYADSAKRVKLVETTSGAYYG-NGYQDVQNRVPKIE 332 (372)
T ss_dssp HHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTTTHHHHHTCCEEEC--------------CCCCBCCH
T ss_pred HHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcccccccccceeeecccccccc-CCccccceeecCHH
Confidence 9999999874 567999999 489999999999999999764321111000 00000 00012334566788
Q ss_pred HHHH-cCCCcccccHHHHHHHHhC
Q 020476 303 RAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 303 k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
|+++ |||+|++ +++++|+++++
T Consensus 333 k~~~~lG~~p~~-~l~e~l~~~~~ 355 (372)
T 3slg_A 333 NTMQELGWAPQF-TFDDALRQIFE 355 (372)
T ss_dssp HHHHHHTCCCCC-CHHHHHHHHHH
T ss_pred HHHHHcCCCCCC-CHHHHHHHHHH
Confidence 8865 9999999 59999998863
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-40 Score=292.86 Aligned_cols=302 Identities=17% Similarity=0.124 Sum_probs=226.3
Q ss_pred HHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-cCC---C-----CCccccCceeecCCchh
Q 020476 10 LTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFP---G-----KKTRFFPGVMIAEEPQW 80 (325)
Q Consensus 10 ~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~---~-----~~~~~~~~~d~~d~~~~ 80 (325)
-++...+.+.+|+|||||||||||++++++|+++|++|++++|+...... ... . .....+..+|+.|.+.+
T Consensus 17 ~~~~~~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 17 EELRKELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HHHHHHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHH
T ss_pred HhhchhcCccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHH
Confidence 34555566778899999999999999999999999999999997642110 000 0 00011445788899999
Q ss_pred HhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 81 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
.++++++|+|||||+.... .....++...+++|+.++.+++++|++ .+++++||+||.++ |+.....+++|+++.
T Consensus 97 ~~~~~~~d~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~E~~~~ 171 (352)
T 1sb8_A 97 NNACAGVDYVLHQAALGSV-PRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIG 171 (352)
T ss_dssp HHHHTTCSEEEECCSCCCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCC
T ss_pred HHHhcCCCEEEECCcccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHh--cCCCCCCCCCCCCCC
Confidence 9999999999999996421 112345678899999999999999998 68899999999998 988777788888875
Q ss_pred C--Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHHcCCCC---CCCcceeeeccHH
Q 020476 161 G--NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL---GSGQQWFSWIHLD 229 (325)
Q Consensus 161 ~--~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~ 229 (325)
. ..| .+|...|.....+..+.+++++++||+.+||++.... ..+++.+ ....+.++ +++...++++|++
T Consensus 172 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~ 251 (352)
T 1sb8_A 172 KPLSPYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIE 251 (352)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHH
Confidence 4 356 6787777777766666699999999999999975321 1233322 33455553 6778899999999
Q ss_pred HHHHHHHHHHcCC--CCCceEEeeCCCCCCHHHHHHHHHHHh---CCCCCCCccHHHHHHHhCccceeeccCcccChhHH
Q 020476 230 DIVNLIYEALSNP--SYRGVINGTAPNPVRLAEMCDHLGNVL---GRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA 304 (325)
Q Consensus 230 D~a~a~~~~~~~~--~~~~~~~~~~~~~~s~~e~~~~i~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 304 (325)
|+|++++.++..+ ..+++||+++++++|+.|+++.+.+.+ |.+.... +.. ............++++|+
T Consensus 252 Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~~~-~~~------~~~~~~~~~~~~~d~~k~ 324 (352)
T 1sb8_A 252 NTVQANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHRE-PVY------RDFREGDVRHSLADISKA 324 (352)
T ss_dssp HHHHHHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCC-CEE------ECCCTTCCSBCCBCCHHH
T ss_pred HHHHHHHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCCCC-cee------cCCCccchhhccCCHHHH
Confidence 9999999999863 256799999999999999999999999 8764321 110 000001123456778888
Q ss_pred H-HcCCCcccccHHHHHHHHh
Q 020476 305 K-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 305 ~-~lg~~p~~~~~~~~l~~~~ 324 (325)
+ +|||+|++ +++|+|++++
T Consensus 325 ~~~lG~~p~~-~~~e~l~~~~ 344 (352)
T 1sb8_A 325 AKLLGYAPKY-DVSAGVALAM 344 (352)
T ss_dssp HHHTCCCCCC-CHHHHHHHHH
T ss_pred HHHhCCCCCC-CHHHHHHHHH
Confidence 6 59999999 5999999886
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-40 Score=291.36 Aligned_cols=292 Identities=19% Similarity=0.207 Sum_probs=221.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC--CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~--~~d~vi 91 (325)
++|+||||||+||||++++++|+++|++|++++|+.......... .....+..+|+.|.+.+.++++ ++|+||
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 357999999999999999999999999999999987654321100 0011245689999999999987 899999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEV 168 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~ 168 (325)
|+|+.... ......+.+.++.|+.++.++++++++ .+++++||+||.++ ||.....+++|+.+.. ..| .+|.
T Consensus 84 h~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~Y~~sK~ 158 (341)
T 3enk_A 84 HFAALKAV-GESVAKPIEYYRNNLDSLLSLLRVMRE--RAVKRIVFSSSATV--YGVPERSPIDETFPLSATNPYGQTKL 158 (341)
T ss_dssp ECCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--BCSCSSSSBCTTSCCBCSSHHHHHHH
T ss_pred ECcccccc-CccccChHHHHHHHHHHHHHHHHHHHh--CCCCEEEEEecceE--ecCCCCCCCCCCCCCCCCChhHHHHH
Confidence 99996421 112344567889999999999999999 77889999999998 9988888888888754 457 7888
Q ss_pred HHHHHHHHHhhcCC-ceEEEEEeceEEcCCCCc---------ccchHHHH-HHHcC--CCC---C------CCcceeeec
Q 020476 169 CREWEGTALKVNKD-VRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SGQQWFSWI 226 (325)
Q Consensus 169 ~~~~~~~~~~~~~~-~~~~ilRp~~i~g~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~~~~~~~v 226 (325)
..|.....+..+.+ ++++++||+++||++... ...+.+.+ ....+ .++ + ++.+.++++
T Consensus 159 ~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i 238 (341)
T 3enk_A 159 MAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYI 238 (341)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEE
T ss_pred HHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeE
Confidence 88877777666654 999999999999985311 12344443 22322 222 3 788999999
Q ss_pred cHHHHHHHHHHHHcC---CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhH
Q 020476 227 HLDDIVNLIYEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 303 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~---~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 303 (325)
|++|+|++++.++++ ...+++||+++++++|+.|+++.+.+.+|.+..+..... ..+. .....++++|
T Consensus 239 ~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~----~~~~-----~~~~~~d~~k 309 (341)
T 3enk_A 239 HVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVPYELVAR----RPGD-----VAECYANPAA 309 (341)
T ss_dssp EHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCCEEEECC----CTTC-----CSEECBCCHH
T ss_pred EHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcceeeCCC----CCCC-----ccccccCHHH
Confidence 999999999999986 235679999999999999999999999998743221110 0111 2234567777
Q ss_pred HH-HcCCCcccccHHHHHHHHhC
Q 020476 304 AK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 304 ~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
++ +|||+|++ +++++|+++++
T Consensus 310 ~~~~lG~~p~~-~l~~~l~~~~~ 331 (341)
T 3enk_A 310 AAETIGWKAER-DLERMCADHWR 331 (341)
T ss_dssp HHHHHCCCCCC-CHHHHHHHHHH
T ss_pred HHHHcCCCCCC-CHHHHHHHHHH
Confidence 85 69999999 59999999863
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-40 Score=289.42 Aligned_cols=291 Identities=18% Similarity=0.168 Sum_probs=212.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|+|||||||||||++++++|+++|++|++++|++.+...+... ...+..+|+.|.+.+.++++++|+|||+|+..
T Consensus 11 ~~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~--~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~ 88 (342)
T 2x4g_A 11 GAHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYL--EPECRVAEMLDHAGLERALRGLDGVIFSAGYY 88 (342)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGG--CCEEEECCTTCHHHHHHHTTTCSEEEEC----
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccC--CeEEEEecCCCHHHHHHHHcCCCEEEECCccC
Confidence 3457999999999999999999999999999999987654432210 01144679999999999999999999999964
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC--ceecCCCCCCC------ch-HHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPSGN------DY-LAEV 168 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~--~~~~e~~~~~~------~y-~~k~ 168 (325)
. ....++..++++|+.++.+++++|++ .+++++||+||.++ |+.... .+ +|+++..+ .| .+|.
T Consensus 89 ~---~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~-~E~~~~~p~~~~~~~Y~~sK~ 160 (342)
T 2x4g_A 89 P---SRPRRWQEEVASALGQTNPFYAACLQ--ARVPRILYVGSAYA--MPRHPQGLPG-HEGLFYDSLPSGKSSYVLCKW 160 (342)
T ss_dssp -----------CHHHHHHHHHHHHHHHHHH--HTCSCEEEECCGGG--SCCCTTSSCB-CTTCCCSSCCTTSCHHHHHHH
T ss_pred c---CCCCCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEECCHHh--hCcCCCCCCC-CCCCCCCccccccChHHHHHH
Confidence 2 23345677889999999999999998 68899999999998 886654 44 77777544 56 6787
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCC-Cc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDG-GA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
..|.....+... +++++++||+.+||++. .. ...++. ....+.+..-++..++++|++|+|++++.+++++..++
T Consensus 161 ~~e~~~~~~~~~-g~~~~ilrp~~v~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~g~ 237 (342)
T 2x4g_A 161 ALDEQAREQARN-GLPVVIGIPGMVLGELDIGPTTGRVIT--AIGNGEMTHYVAGQRNVIDAAEAGRGLLMALERGRIGE 237 (342)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECEEECSCCSSCSTTHHHH--HHHTTCCCEEECCEEEEEEHHHHHHHHHHHHHHSCTTC
T ss_pred HHHHHHHHHhhc-CCcEEEEeCCceECCCCccccHHHHHH--HHHcCCCccccCCCcceeeHHHHHHHHHHHHhCCCCCc
Confidence 777777666665 99999999999999976 21 222221 23334332115678899999999999999998776667
Q ss_pred eEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHH----------hCcc-------ceeeccCcccChhHHHH-cC
Q 020476 247 VINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAV----------LGEG-------AFVVLEGQRVVPARAKE-LG 308 (325)
Q Consensus 247 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~----------~~~~-------~~~~~~~~~~~~~k~~~-lg 308 (325)
+||+++++ +|+.|+++.+.+.+|.+..+..|.+..... .+.. .........++++|+++ ||
T Consensus 238 ~~~v~~~~-~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 316 (342)
T 2x4g_A 238 RYLLTGHN-LEMADLTRRIAELLGQPAPQPMSMAMARALATLGRLRYRVSGQLPLLDETAIEVMAGGQFLDGRKAREELG 316 (342)
T ss_dssp EEEECCEE-EEHHHHHHHHHHHHTCCCCEEECHHHHHHHHHHHHC----------------CCTTCCCCBCCHHHHHHHC
T ss_pred eEEEcCCc-ccHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHhcCcccChHHHHHhCC
Confidence 99999999 999999999999999874335555443221 1100 01113456778889975 99
Q ss_pred C-CcccccHHHHHHHHh
Q 020476 309 F-PFKYRYVKDALKAIM 324 (325)
Q Consensus 309 ~-~p~~~~~~~~l~~~~ 324 (325)
| +| + +++++|++++
T Consensus 317 ~~~p-~-~~~~~l~~~~ 331 (342)
T 2x4g_A 317 FFST-T-ALDDTLLRAI 331 (342)
T ss_dssp CCCC-S-CHHHHHHHHH
T ss_pred CCCC-C-CHHHHHHHHH
Confidence 9 99 6 6999999876
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-40 Score=290.07 Aligned_cols=283 Identities=14% Similarity=0.138 Sum_probs=217.0
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHh--CCCeEEEEecCCCcc-------------cccCCCCCccccCceeecCCchhH
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQA--DNHQVRVLTRSRSKA-------------ELIFPGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~--~g~~V~~~~r~~~~~-------------~~~~~~~~~~~~~~~d~~d~~~~~ 81 (325)
.+.+|+||||||+||||++|+++|++ .|++|++++|+.... ..... ....+..+|+.|++.+.
T Consensus 7 ~~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~d~~~~~ 84 (362)
T 3sxp_A 7 ELENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIG--FKGEVIAADINNPLDLR 84 (362)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTT--CCSEEEECCTTCHHHHH
T ss_pred hcCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccc--cCceEEECCCCCHHHHH
Confidence 34568999999999999999999999 899999999976511 01110 01124467999999999
Q ss_pred hh-hCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 82 DC-IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 82 ~~-~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++ ..++|+||||||... ....++...+++|+.++.+++++|++ .+++ +||+||.++ ||.... +++|+++.
T Consensus 85 ~~~~~~~D~vih~A~~~~---~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~~~-~V~~SS~~v--yg~~~~-~~~E~~~~ 155 (362)
T 3sxp_A 85 RLEKLHFDYLFHQAAVSD---TTMLNQELVMKTNYQAFLNLLEIARS--KKAK-VIYASSAGV--YGNTKA-PNVVGKNE 155 (362)
T ss_dssp HHTTSCCSEEEECCCCCG---GGCCCHHHHHHHHTHHHHHHHHHHHH--TTCE-EEEEEEGGG--GCSCCS-SBCTTSCC
T ss_pred HhhccCCCEEEECCccCC---ccccCHHHHHHHHHHHHHHHHHHHHH--cCCc-EEEeCcHHH--hCCCCC-CCCCCCCC
Confidence 98 789999999999642 23456788999999999999999998 6666 999999988 997766 88888875
Q ss_pred CC--ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCccc---chHHHH--HHHcCCCC---CCCcceeeeccHH
Q 020476 161 GN--DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFAGGPL---GSGQQWFSWIHLD 229 (325)
Q Consensus 161 ~~--~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~---~~~~~~--~~~~~~~~---~~~~~~~~~v~v~ 229 (325)
.+ .| .+|...|.....+..+ ++++++||+++||++..... .++..+ ....+.++ +++.+.++++|++
T Consensus 156 ~p~~~Y~~sK~~~E~~~~~~~~~--~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 233 (362)
T 3sxp_A 156 SPENVYGFSKLCMDEFVLSHSND--NVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIE 233 (362)
T ss_dssp CCSSHHHHHHHHHHHHHHHTTTT--SCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHH
T ss_pred CCCChhHHHHHHHHHHHHHHhcc--CCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHH
Confidence 44 46 7777777777666554 89999999999999864321 233333 33445543 6677899999999
Q ss_pred HHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHH-HHc
Q 020476 230 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARA-KEL 307 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~-~~l 307 (325)
|+|++++.+++.+. .|+||+++++++|+.|+++.+.+.+| +.. ...|... ........++++|+ +.|
T Consensus 234 Dva~ai~~~~~~~~-~g~~~i~~~~~~s~~e~~~~i~~~~g-~~~~~~~~~~~---------~~~~~~~~~d~~k~~~~l 302 (362)
T 3sxp_A 234 DVIQANVKAMKAQK-SGVYNVGYSQARSYNEIVSILKEHLG-DFKVTYIKNPY---------AFFQKHTQAHIEPTILDL 302 (362)
T ss_dssp HHHHHHHHHTTCSS-CEEEEESCSCEEEHHHHHHHHHHHHC-CCEEECCC----------------CCCCBCCHHHHHHH
T ss_pred HHHHHHHHHHhcCC-CCEEEeCCCCCccHHHHHHHHHHHcC-CCceEECCCCC---------cCcccceecCHHHHHHHh
Confidence 99999999999875 45999999999999999999999999 532 2223220 11234567788888 569
Q ss_pred CCCcccccHHHHHHHHh
Q 020476 308 GFPFKYRYVKDALKAIM 324 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~ 324 (325)
||+|++ +++++|++++
T Consensus 303 G~~p~~-~l~e~l~~~~ 318 (362)
T 3sxp_A 303 DYTPLY-DLESGIKDYL 318 (362)
T ss_dssp CCCCCC-CHHHHHHHHH
T ss_pred CCCCCC-CHHHHHHHHH
Confidence 999999 5999999886
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-40 Score=286.39 Aligned_cols=288 Identities=19% Similarity=0.257 Sum_probs=218.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~ 97 (325)
||+||||||+||||++++++|+++|++|++++|+.......... ...+..+|+.|.+.+.++++ ++|+|||+|+..
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~ 78 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHEDAITE--GAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS 78 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCT--TSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchhhcCC--CcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence 57999999999999999999999999999999976543221111 11244678899999999988 899999999964
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEG 174 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~~ 174 (325)
.. .....++...+++|+.++.+++++|++ .+++++||+||.++ |+.....+++|+++.. ..| .+|...|...
T Consensus 79 ~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~ 153 (330)
T 2c20_A 79 LV-GVSMEKPLQYYNNNVYGALCLLEVMDE--FKVDKFIFSSTAAT--YGEVDVDLITEETMTNPTNTYGETKLAIEKML 153 (330)
T ss_dssp CH-HHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--GCSCSSSSBCTTSCCCCSSHHHHHHHHHHHHH
T ss_pred Cc-cccccCHHHHHHHHhHHHHHHHHHHHH--cCCCEEEEeCCcee--eCCCCCCCCCcCCCCCCCChHHHHHHHHHHHH
Confidence 21 112345678899999999999999998 68899999999988 9877777888988754 457 7788888777
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCC--------cccchHHHH-HHHcC--CCC---C------CCcceeeeccHHHHHHH
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF-MMFAG--GPL---G------SGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~--------~~~~~~~~~-~~~~~--~~~---~------~~~~~~~~v~v~D~a~a 234 (325)
..+..+.+++++++||+++||++.. ....+.+.+ ....+ .++ + ++...++++|++|+|++
T Consensus 154 ~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a 233 (330)
T 2c20_A 154 HWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAA 233 (330)
T ss_dssp HHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHH
T ss_pred HHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHH
Confidence 7777767999999999999999621 122344443 22222 222 2 67788999999999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC-ccHHHHHHHhCccceeeccCcccChhHHH-HcCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF 309 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~ 309 (325)
++.+++++. .+++||+++++++|+.|+++.+.+.+|.+..+. .|. ..+. .....++++|++ +|||
T Consensus 234 ~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~~~~~d~~k~~~~lG~ 303 (330)
T 2c20_A 234 HFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEIPAEVAPR-----RAGD-----PARLVASSQKAKEKLGW 303 (330)
T ss_dssp HHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCCCEEEECC-----CSSC-----CSEECBCCHHHHHHHCC
T ss_pred HHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCC-----CCCc-----ccccccCHHHHHHHhCC
Confidence 999997642 357999999999999999999999999763221 111 0111 123456777885 5999
Q ss_pred CcccccHHHHHHHHh
Q 020476 310 PFKYRYVKDALKAIM 324 (325)
Q Consensus 310 ~p~~~~~~~~l~~~~ 324 (325)
+|++++++++|++++
T Consensus 304 ~p~~~~l~~~l~~~~ 318 (330)
T 2c20_A 304 DPRYVNVKTIIEHAW 318 (330)
T ss_dssp CCSCCCHHHHHHHHH
T ss_pred CCccCCHHHHHHHHH
Confidence 999855999999876
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=284.79 Aligned_cols=284 Identities=21% Similarity=0.253 Sum_probs=216.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|+||||||+||||++++++|+++|++|++++|........... ...+..+|+.|++.+.++++ ++|+|||+|+...
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 78 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVPK--GVPFFRVDLRDKEGVERAFREFRPTHVSHQAAQAS 78 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSCT--TCCEECCCTTCHHHHHHHHHHHCCSEEEECCSCCC
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhccc--CeEEEECCCCCHHHHHHHHHhcCCCEEEECccccC
Confidence 6899999999999999999999999999999854332111111 11144679999999998887 8999999998642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee-eeeeecC-CCCceecCCCCC--CCch-HHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT-ALGYYGT-SETEVFDESSPS--GNDY-LAEVCREWE 173 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~-~v~~~g~-~~~~~~~e~~~~--~~~y-~~k~~~~~~ 173 (325)
. .....++...+++|+.++.+++++|++ .+++++|++||. ++ ||. ....+.+|+++. ...| .+|...|..
T Consensus 79 ~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~~--~g~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 153 (311)
T 2p5y_A 79 V-KVSVEDPVLDFEVNLLGGLNLLEACRQ--YGVEKLVFASTGGAI--YGEVPEGERAEETWPPRPKSPYAASKAAFEHY 153 (311)
T ss_dssp H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEHHHH--HCCCCTTCCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred c-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCChhh--cCCCCCCCCcCCCCCCCCCChHHHHHHHHHHH
Confidence 1 112345677899999999999999998 678899999998 77 886 445577887764 3467 788888877
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCcc--cchHHHH--HHHcCCC---C-----CCCcceeeeccHHHHHHHHHHHHcC
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGGP---L-----GSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~~~--~~~~~~~---~-----~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
...+..+.+++++++||+++||++.... ..+++.+ ....+.+ . +++.+.++++|++|+|++++.++++
T Consensus 154 ~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 233 (311)
T 2p5y_A 154 LSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFS 233 (311)
T ss_dssp HHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhC
Confidence 7776666799999999999999975332 1223322 2334444 2 5667889999999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l 320 (325)
+ +++||+++++++|+.|+++.+.+.+|.+..+ ..|.. .+. .....++++|+++|||+|++ +++++|
T Consensus 234 ~--~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~~~~~d~~k~~~lg~~p~~-~~~~~l 300 (311)
T 2p5y_A 234 L--EGIYNVGTGEGHTTREVLMAVAEAAGKAPEVQPAPPR-----PGD-----LERSVLSPLKLMAHGWRPKV-GFQEGI 300 (311)
T ss_dssp C--CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEEECCC-----TTC-----CSBCCBCCHHHHTTTCCCSS-CHHHHH
T ss_pred C--CCEEEeCCCCCccHHHHHHHHHHHhCCCCCceeCCCC-----ccc-----hhhccCCHHHHHHCCCCCCC-CHHHHH
Confidence 5 6799999999999999999999999976332 11111 111 23456778888779999999 599999
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
++++
T Consensus 301 ~~~~ 304 (311)
T 2p5y_A 301 RLTV 304 (311)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=288.90 Aligned_cols=281 Identities=16% Similarity=0.140 Sum_probs=215.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~ 95 (325)
++||+|||||||||||++|+++|+++|+ +....... . ....+|+.|.+.+.+++++ +|+|||||+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~~~~~-~------~~~~~D~~d~~~~~~~~~~~~~d~Vih~A~ 70 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGEDWVF-V------SSKDADLTDTAQTRALFEKVQPTHVIHLAA 70 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTCEEEE-C------CTTTCCTTSHHHHHHHHHHSCCSEEEECCC
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccccccc-c------CceecccCCHHHHHHHHhhcCCCEEEECce
Confidence 4578999999999999999999999998 22111111 1 1446899999999999976 999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC----CCCC---ch-HHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAE 167 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~----~~~~---~y-~~k 167 (325)
..........++...+++|+.++.+++++|++ .+++++||+||.++ ||.....+++|++ ++.+ .| .+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK 146 (319)
T 4b8w_A 71 MVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFE--VGARKVVSCLSTCI--FPDKTTYPIDETMIHNGPPHNSNFGYSYAK 146 (319)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SCSSCCSSBCGGGGGBSCCCSSSHHHHHHH
T ss_pred ecccccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCeEEEEcchhh--cCCCCCCCccccccccCCCCCCcchHHHHH
Confidence 74322223445678899999999999999999 78899999999998 9988888888876 4333 36 678
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--H----HHcCCCC---CCCcceeeeccHHHHHHHH
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--M----MFAGGPL---GSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~----~~~~~~~---~~~~~~~~~v~v~D~a~a~ 235 (325)
...|.....+..+.+++++++||+++||++.... ..+++.+ . ...+.++ +++.+.++++|++|+|+++
T Consensus 147 ~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~ 226 (319)
T 4b8w_A 147 RMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPRRQFIYSLDLAQLF 226 (319)
T ss_dssp HHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCEECEEEHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCeeEEEEeHHHHHHHH
Confidence 8888877777777799999999999999975321 2233322 2 3455553 7888999999999999999
Q ss_pred HHHHcCCC--CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcc
Q 020476 236 YEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK 312 (325)
Q Consensus 236 ~~~~~~~~--~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~ 312 (325)
+.+++++. .+++||+++++++|+.|+++.+.+.+|.+..+..... .........++++|+++ |||.|.
T Consensus 227 ~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~---------~~~~~~~~~~d~~k~~~~lg~~p~ 297 (319)
T 4b8w_A 227 IWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGEVTFDTT---------KSDGQFKKTASNSKLRTYLPDFRF 297 (319)
T ss_dssp HHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSCEEEETT---------SCCCCSCCCBCCHHHHHHCTTCCC
T ss_pred HHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCcEEeCCC---------CCcCcccccCCHHHHHHhcCCCCC
Confidence 99998744 3459999999999999999999999997643322111 01112234678888876 999999
Q ss_pred cccHHHHHHHHhC
Q 020476 313 YRYVKDALKAIMS 325 (325)
Q Consensus 313 ~~~~~~~l~~~~~ 325 (325)
+ +++++|+++++
T Consensus 298 ~-~~~~~l~~~~~ 309 (319)
T 4b8w_A 298 T-PFKQAVKETCA 309 (319)
T ss_dssp C-CHHHHHHHHHH
T ss_pred C-CHHHHHHHHHH
Confidence 8 59999998863
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=287.91 Aligned_cols=274 Identities=13% Similarity=0.160 Sum_probs=214.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~ 97 (325)
+|+||||||+||||++|+++|+++|++|+++.|+. .+|+.|.+.+.++++ ++|+|||+|+..
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~----------------~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 66 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV 66 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc----------------cCCccCHHHHHHHHHhcCCCEEEEcCeec
Confidence 47999999999999999999999999999988753 268889999999998 999999999964
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC----CCCC---ch-HHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS----PSGN---DY-LAEVC 169 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~----~~~~---~y-~~k~~ 169 (325)
........++..++++|+.++.+++++|++ .+++++||+||.++ ||.....+++|++ +..+ .| .+|..
T Consensus 67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~p~~~~Y~~sK~~ 142 (321)
T 1e6u_A 67 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKIA 142 (321)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred CCcchhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEccHHH--cCCCCCCCcCccccccCCCCCCCCccHHHHHH
Confidence 211112445678899999999999999999 78889999999998 9877677788876 3332 56 67777
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHH----cC-CC---CCCCcceeeeccHHHHHHHHH
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMF----AG-GP---LGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~----~~-~~---~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.|.....+..+.+++++++||+++||++.... ..+++.+ ... .+ .+ .+++...++++|++|+|++++
T Consensus 143 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~i~v~Dva~~~~ 222 (321)
T 1e6u_A 143 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI 222 (321)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEEEeEEHHHHHHHHH
Confidence 77777666666699999999999999975421 1222222 111 23 33 267888999999999999999
Q ss_pred HHHcCCCC---------CceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC-ccHHHHHHHhCccceeeccCcccChhHHHH
Q 020476 237 EALSNPSY---------RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAKE 306 (325)
Q Consensus 237 ~~~~~~~~---------~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 306 (325)
.+++++.. +++||+++++++|+.|+++.+.+.+|.+..+. .+.. +.......++++|+++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----------~~~~~~~~~d~~k~~~ 292 (321)
T 1e6u_A 223 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDASK----------PDGTPRKLLDVTRLHQ 292 (321)
T ss_dssp HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETTS----------CCCCSBCCBCCHHHHH
T ss_pred HHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCCceEeCCCC----------CCCcccccCCHHHHHh
Confidence 99988754 47999999999999999999999999764321 1110 1112345678888877
Q ss_pred cCCCcccccHHHHHHHHh
Q 020476 307 LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 307 lg~~p~~~~~~~~l~~~~ 324 (325)
|||+|++ +++++|++++
T Consensus 293 lG~~p~~-~~~~~l~~~~ 309 (321)
T 1e6u_A 293 LGWYHEI-SLEAGLASTY 309 (321)
T ss_dssp TTCCCCC-CHHHHHHHHH
T ss_pred cCCccCC-cHHHHHHHHH
Confidence 9999999 5999999886
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=283.45 Aligned_cols=269 Identities=14% Similarity=0.113 Sum_probs=210.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~ 97 (325)
+|+|||||||||||+++++.|+++|++|++++|.. +|+.|.+.+.++++ ++|+|||+|+..
T Consensus 5 ~m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------~D~~d~~~~~~~~~~~~~d~vi~~a~~~ 67 (287)
T 3sc6_A 5 KERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL-----------------LDITNISQVQQVVQEIRPHIIIHCAAYT 67 (287)
T ss_dssp CEEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT-----------------SCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred eeEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc-----------------cCCCCHHHHHHHHHhcCCCEEEECCccc
Confidence 35999999999999999999999999999999922 78889999999987 799999999965
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEG 174 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~ 174 (325)
.. .....++...+++|+.++.+++++|++ .++ ++||+||.++ |+.....+++|+++..+ .| .+|...|...
T Consensus 68 ~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~ 141 (287)
T 3sc6_A 68 KV-DQAEKERDLAYVINAIGARNVAVASQL--VGA-KLVYISTDYV--FQGDRPEGYDEFHNPAPINIYGASKYAGEQFV 141 (287)
T ss_dssp CH-HHHTTCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCCCCSSCBCTTSCCCCCSHHHHHHHHHHHHH
T ss_pred Ch-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchhhh--cCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 21 112246788999999999999999998 566 7999999998 99888888999887654 56 6666666555
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEee
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 251 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~ 251 (325)
..+ ..+++++||+.+||++... +...+ ....+.++ ..+++.++++|++|+|++++.+++++. +|+||++
T Consensus 142 ~~~----~~~~~ilR~~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~-~~~~~i~ 213 (287)
T 3sc6_A 142 KEL----HNKYFIVRTSWLYGKYGNN---FVKTMIRLGKEREEISVVADQIGSPTYVADLNVMINKLIHTSL-YGTYHVS 213 (287)
T ss_dssp HHH----CSSEEEEEECSEECSSSCC---HHHHHHHHHTTCSEEEEECSCEECCEEHHHHHHHHHHHHTSCC-CEEEECC
T ss_pred HHh----CCCcEEEeeeeecCCCCCc---HHHHHHHHHHcCCCeEeecCcccCceEHHHHHHHHHHHHhCCC-CCeEEEc
Confidence 443 3478999999999986532 22222 22334443 223478999999999999999999887 8899999
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHhC
Q 020476 252 APNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 252 ~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
+++++|+.|+++.+++.+|.+.. .+.+........ .......++++|++++||.|++ +++++|+++++
T Consensus 214 ~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~-----~~~~~~~~d~~k~~~lg~~p~~-~~~~~l~~~~~ 282 (287)
T 3sc6_A 214 NTGSCSWFEFAKKIFSYANMKVNVLPVSTEEFGAAA-----ARPKYSIFQHNMLRLNGFLQMP-SWEEGLERFFI 282 (287)
T ss_dssp CBSCEEHHHHHHHHHHHHTCCCEEEEECHHHHCCSS-----CCCSBCCBCCHHHHHTTCCCCC-BHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHHHcCCCcceeeeehhhcCccc-----CCCCcccccHHHHHhhCCCCCc-cHHHHHHHHHH
Confidence 99999999999999999998743 234443321111 1223456788889999999999 59999999863
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-40 Score=284.85 Aligned_cols=286 Identities=16% Similarity=0.122 Sum_probs=218.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~~ 96 (325)
.+|+||||||+||||++++++|+++|++|++++|++.. ..+ ...+..+|+.|.+.+.+++++ +|+|||||+.
T Consensus 11 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~~l-----~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 11 GSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-KLP-----NVEMISLDIMDSQRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-CCT-----TEEEEECCTTCHHHHHHHHHHHCCSEEEECCSC
T ss_pred CcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-ccc-----eeeEEECCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 35799999999999999999999999999999998765 221 112446799999999998875 9999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC--CCceecCCCCCC--Cch-HHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS--ETEVFDESSPSG--NDY-LAEVCRE 171 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~--~~~~~~e~~~~~--~~y-~~k~~~~ 171 (325)
... ....+++...+++|+.++.+++++|++. .+++++||+||.++ ||.. ...+++|+++.. ..| .+|...|
T Consensus 85 ~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~~SS~~v--~g~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E 160 (321)
T 2pk3_A 85 SSV-KDSWLNKKGTFSTNVFGTLHVLDAVRDS-NLDCRILTIGSSEE--YGMILPEESPVSEENQLRPMSPYGVSKASVG 160 (321)
T ss_dssp CCH-HHHTTCHHHHHHHHHHHHHHHHHHHHHH-TCCCEEEEEEEGGG--TBSCCGGGCSBCTTSCCBCCSHHHHHHHHHH
T ss_pred cch-hhhhhcHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEccHHh--cCCCCCCCCCCCCCCCCCCCCccHHHHHHHH
Confidence 421 1122356788999999999999999772 25789999999998 8876 566788887653 467 7788788
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHc---C--CC---CCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFA---G--GP---LGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~---~--~~---~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.....+..+.+++++++||+++||++.... .+.+.+ .... + .+ ++++...++++|++|+|++++.++++
T Consensus 161 ~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~ 239 (321)
T 2pk3_A 161 MLARQYVKAYGMDIIHTRTFNHIGPGQSLG-FVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQY 239 (321)
T ss_dssp HHHHHHHHHHCCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEeCcccCcCCCCC-chHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhC
Confidence 777776666699999999999999976432 122222 2222 4 23 26778889999999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA 319 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~ 319 (325)
+..+++||+++++++|+.|+++.+.+.+|.+..+ ..|.. ..........++++|+++ |||+|++ +++++
T Consensus 240 ~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~--------~~~~~~~~~~~d~~k~~~~lG~~p~~-~~~e~ 310 (321)
T 2pk3_A 240 GKTGDVYNVCSGIGTRIQDVLDLLLAMANVKIDTELNPLQ--------LRPSEVPTLIGSNKRLKDSTGWKPRI-PLEKS 310 (321)
T ss_dssp CCTTCEEEESCSCEEEHHHHHHHHHHHSSSCCEEEECGGG--------CCSSCCSBCCBCCHHHHHHHCCCCCS-CHHHH
T ss_pred CCCCCeEEeCCCCCeeHHHHHHHHHHHhCCCCceeecccc--------CCCcccchhccCHHHHHHHcCCCcCC-CHHHH
Confidence 7556799999999999999999999999976332 22211 011122456778888865 8999999 59999
Q ss_pred HHHHh
Q 020476 320 LKAIM 324 (325)
Q Consensus 320 l~~~~ 324 (325)
|++++
T Consensus 311 l~~~~ 315 (321)
T 2pk3_A 311 LFEIL 315 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=290.48 Aligned_cols=289 Identities=18% Similarity=0.206 Sum_probs=219.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+||+|||||||||||++++++|+++|++|++++|+.......... ...+..+|+.|.+.+.++++++|+|||+|+.
T Consensus 26 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~v~~~~~Dl~d~~~~~~~~~~~d~Vih~A~~ 103 (379)
T 2c5a_A 26 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMF--CDEFHLVDLRVMENCLKVTEGVDHVFNLAAD 103 (379)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGT--CSEEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred cccCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccC--CceEEECCCCCHHHHHHHhCCCCEEEECcee
Confidence 34578999999999999999999999999999999987553322110 1124467899999999999999999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC-----ceecCCC--C--CCCch-HH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-----EVFDESS--P--SGNDY-LA 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~-----~~~~e~~--~--~~~~y-~~ 166 (325)
.....+...++..++++|+.++.+++++|++ .+++++||+||.++ |+.... .+++|++ + +...| .+
T Consensus 104 ~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~~V~~SS~~v--~~~~~~~~~~~~~~~E~~~~~~~~~~~Y~~s 179 (379)
T 2c5a_A 104 MGGMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGLE 179 (379)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred cCcccccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEeehhe--eCCCCCCCccCCCcCcccCCCCCCCChhHHH
Confidence 4221111345778899999999999999998 68889999999988 875322 3566655 2 34467 77
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCccc---chHHHH--HHHcCCC----CCCCcceeeeccHHHHHHHHHH
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALA---KMIPLF--MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~---~~~~~~--~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
|...|.....+..+.+++++++||+++||++..... .+...+ ....+.+ .+++.+.++++|++|+|++++.
T Consensus 180 K~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~ai~~ 259 (379)
T 2c5a_A 180 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR 259 (379)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEEEHHHHHHHHHH
Confidence 887887777666666999999999999999753211 122222 3334544 2677889999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHH-HcCCCccccc
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRY 315 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~ 315 (325)
+++++ .+++||+++++++|+.|+++.+.+.+|.+..+ ..|... ......++++|++ .|||+|++ +
T Consensus 260 ~l~~~-~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----------~~~~~~~d~~k~~~~lG~~p~~-~ 326 (379)
T 2c5a_A 260 LTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPGPE-----------GVRGRNSDNNLIKEKLGWAPNM-R 326 (379)
T ss_dssp HHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECCCC-----------CCSBCEECCHHHHHHHSCCCCC-C
T ss_pred Hhhcc-CCCeEEeCCCCccCHHHHHHHHHHHhCCCCceeeCCCCC-----------CcccccCCHHHHHHHhCCCCCC-C
Confidence 99876 57899999999999999999999999976332 222210 1123456778886 59999999 4
Q ss_pred HHHHHHHHh
Q 020476 316 VKDALKAIM 324 (325)
Q Consensus 316 ~~~~l~~~~ 324 (325)
++++|++++
T Consensus 327 l~e~l~~~~ 335 (379)
T 2c5a_A 327 LKEGLRITY 335 (379)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999876
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-39 Score=282.64 Aligned_cols=296 Identities=19% Similarity=0.205 Sum_probs=210.3
Q ss_pred hHHHHHHHHHhh--hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh
Q 020476 6 SEILLTFCRLLQ--ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 6 ~~~~~~~~~~~~--~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~ 83 (325)
+..++..++..+ ...|+||||||+||||++++++|+++|++|++++|+...............+..+|+.|.+.+.++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~ 83 (330)
T 2pzm_A 4 SHHHHHHSSGLVPRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERA 83 (330)
T ss_dssp ----------CCSTTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHH
T ss_pred cccccccccCCcccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHH
Confidence 344555555533 345799999999999999999999999999999997654321111111112446788999999999
Q ss_pred hC--CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCc--eecCCCC
Q 020476 84 IQ--GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE--VFDESSP 159 (325)
Q Consensus 84 ~~--~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~--~~~e~~~ 159 (325)
++ ++|+||||||..... ...++. +++|+.++.+++++|.+ .+++++||+||.++ |+..... +++|++.
T Consensus 84 ~~~~~~D~vih~A~~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~~~~~~~~~~~~E~~~ 155 (330)
T 2pzm_A 84 FDSFKPTHVVHSAAAYKDP--DDWAED--AATNVQGSINVAKAASK--AGVKRLLNFQTALC--YGRPATVPIPIDSPTA 155 (330)
T ss_dssp HHHHCCSEEEECCCCCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--HTCSEEEEEEEGGG--GCSCSSSSBCTTCCCC
T ss_pred HhhcCCCEEEECCccCCCc--cccChh--HHHHHHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCccCCCCcCCCCC
Confidence 98 999999999975321 233333 88999999999999998 67889999999988 8865544 6777763
Q ss_pred CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCC-CCCCcceeeeccHHHHHH-H
Q 020476 160 SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP-LGSGQQWFSWIHLDDIVN-L 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~v~v~D~a~-a 234 (325)
+...| .+|...|.....+ +++++++||+++|||+.. ..+...+ ....+.. ++++. .+++++++|+|+ +
T Consensus 156 ~~~~Y~~sK~~~e~~~~~~----~~~~~~iR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~a 228 (330)
T 2pzm_A 156 PFTSYGISKTAGEAFLMMS----DVPVVSLRLANVTGPRLA--IGPIPTFYKRLKAGQKCFCSDT-VRDFLDMSDFLAIA 228 (330)
T ss_dssp CCSHHHHHHHHHHHHHHTC----SSCEEEEEECEEECTTCC--SSHHHHHHHHHHTTCCCCEESC-EECEEEHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHc----CCCEEEEeeeeeECcCCC--CCHHHHHHHHHHcCCEEeCCCC-EecceeHHHHHHHH
Confidence 44567 6676666554433 799999999999999851 1222222 2223333 34455 789999999999 9
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccc
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR 314 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~ 314 (325)
++.+++++. +++||+++++++|+.|+++.+.+.+|.+.....|... .......++.++.+++++++||+|++
T Consensus 229 ~~~~~~~~~-g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~d~~k~~~~~l~~lG~~p~~- 300 (330)
T 2pzm_A 229 DLSLQEGRP-TGVFNVSTGEGHSIKEVFDVVLDYVGATLAEPVPVVA------PGADDVPSVVLDPSKTETEFGWKAKV- 300 (330)
T ss_dssp HHHTSTTCC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCSSCCCEEC------CCTTSCSEECBCCHHHHHHHCCCCCC-
T ss_pred HHHHhhcCC-CCEEEeCCCCCCCHHHHHHHHHHHhCCCCceeCCCCc------chhhccCCHHHHhhchHHHcCCcccC-
Confidence 999998876 7799999999999999999999999987222222211 12223445555555555889999998
Q ss_pred cHHHHHHHHh
Q 020476 315 YVKDALKAIM 324 (325)
Q Consensus 315 ~~~~~l~~~~ 324 (325)
+++++|++++
T Consensus 301 ~~~~~l~~~~ 310 (330)
T 2pzm_A 301 DFKDTITGQL 310 (330)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5999999876
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-40 Score=288.52 Aligned_cols=292 Identities=18% Similarity=0.207 Sum_probs=216.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCC--CCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~ 93 (325)
.+|+||||||+||||++|+++|+++|++|++++|++.+...... ......+..+|+.|++.+.+++++ +|+|||+
T Consensus 8 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 87 (357)
T 1rkx_A 8 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 87 (357)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhcCCCEEEEC
Confidence 45799999999999999999999999999999998765432210 000112446789999999988875 8999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCC-ceecCCCCC--CCch-HHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEV 168 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~-~~~~e~~~~--~~~y-~~k~ 168 (325)
|+... .......+...+++|+.++.+++++|++ .+ ++++||+||.++ ||.... .+++|+++. ...| .+|.
T Consensus 88 A~~~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--yg~~~~~~~~~E~~~~~~~~~Y~~sK~ 162 (357)
T 1rkx_A 88 AAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKC--YDNKEWIWGYRENEAMGGYDPYSNSKG 162 (357)
T ss_dssp CSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGG--BCCCCSSSCBCTTSCBCCSSHHHHHHH
T ss_pred CCCcc-cccchhCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEecCHHH--hCCCCcCCCCCCCCCCCCCCccHHHHH
Confidence 99531 1122445678899999999999999998 44 789999999998 886654 366776653 3467 7787
Q ss_pred HHHHHHHHHhhcC---------CceEEEEEeceEEcCCCCcccchHHHH--HHHcCCC--CCCCcceeeeccHHHHHHHH
Q 020476 169 CREWEGTALKVNK---------DVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGP--LGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 169 ~~~~~~~~~~~~~---------~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~v~v~D~a~a~ 235 (325)
..|.....+..+. +++++++||+.+||++......+++.+ ....+.+ +.++...++++|++|+|+++
T Consensus 163 ~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~v~v~Dva~a~ 242 (357)
T 1rkx_A 163 CAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGY 242 (357)
T ss_dssp HHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEECCCCCeeccEeHHHHHHHH
Confidence 7777766665432 899999999999999763322344333 3344554 35677889999999999999
Q ss_pred HHHHcC----C-CCCceEEeeCC--CCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-Hc
Q 020476 236 YEALSN----P-SYRGVINGTAP--NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-EL 307 (325)
Q Consensus 236 ~~~~~~----~-~~~~~~~~~~~--~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~l 307 (325)
+.++++ + ..+++||++++ +++|+.|+++.+.+.+|.+..+..+... . +.......++++|++ +|
T Consensus 243 ~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-~-------~~~~~~~~~d~~k~~~~l 314 (357)
T 1rkx_A 243 LLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNA-H-------PHEAHYLKLDCSKAKMQL 314 (357)
T ss_dssp HHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------CCCCCCBCCHHHHHHH
T ss_pred HHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCCccccCCCC-C-------CcCcccccCCHHHHHHHh
Confidence 999874 2 34679999984 5899999999999999987544333211 0 112345678888886 49
Q ss_pred CCCcccccHHHHHHHHh
Q 020476 308 GFPFKYRYVKDALKAIM 324 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~ 324 (325)
||+|++ +++++|++++
T Consensus 315 G~~p~~-~l~e~l~~~~ 330 (357)
T 1rkx_A 315 GWHPRW-NLNTTLEYIV 330 (357)
T ss_dssp CCCCCC-CHHHHHHHHH
T ss_pred CCCcCC-cHHHHHHHHH
Confidence 999999 5999999876
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=282.86 Aligned_cols=289 Identities=18% Similarity=0.174 Sum_probs=214.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCc--ccccCCC--CCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
+|+||||||+||||++++++|+++| ++|++++|+... ...+... .....+..+|+.|.+.+.+++.++|+||||
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 82 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANLKDLEDDPRYTFVKGDVADYELVKELVRKVDGVVHL 82 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHTCSEEEEC
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHHhhhccCCceEEEEcCCCCHHHHHHHhhCCCEEEEC
Confidence 4799999999999999999999986 899999997522 1211111 011123457888999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVC 169 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~ 169 (325)
|+... ......++..++++|+.++.+++++|.+ .+. +++||+||.++ ||.....+++|+++. ...| .+|..
T Consensus 83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK~~ 157 (336)
T 2hun_A 83 AAESH-VDRSISSPEIFLHSNVIGTYTLLESIRR--ENPEVRFVHVSTDEV--YGDILKGSFTENDRLMPSSPYSATKAA 157 (336)
T ss_dssp CCCCC-HHHHHHCTHHHHHHHHHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCCCSSSCBCTTBCCCCCSHHHHHHHH
T ss_pred CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCcEEEEeccHHH--HCCCCCCCcCCCCCCCCCCccHHHHHH
Confidence 99642 1112345567899999999999999998 443 69999999998 987766778887764 3467 77888
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
.|.....+..+.+++++++||+.+||++.... .+.+.+ ....+.++ +++.+.++++|++|+|++++.+++++..
T Consensus 158 ~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~ 236 (336)
T 2hun_A 158 SDMLVLGWTRTYNLNASITRCTNNYGPYQFPE-KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKGES 236 (336)
T ss_dssp HHHHHHHHHHHTTCEEEEEEECEEESTTCCTT-SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcC-chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCCCC
Confidence 88877777777799999999999999975321 223322 33444443 6777889999999999999999987665
Q ss_pred CceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHH
Q 020476 245 RGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKA 322 (325)
Q Consensus 245 ~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~ 322 (325)
+++||+++++++|+.|+++.+.+.+|.+.. +..... ..+ ......++++|+++ |||+|++ +++++|++
T Consensus 237 g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~-----~~~~~~~d~~k~~~~lG~~p~~-~~~~~l~~ 306 (336)
T 2hun_A 237 REIYNISAGEEKTNLEVVKIILRLMGKGEELIELVED----RPG-----HDLRYSLDSWKITRDLKWRPKY-TFDEGIKK 306 (336)
T ss_dssp TCEEEECCSCEECHHHHHHHHHHHTTCCSTTEEEECC----CTT-----CCCCCCBCCHHHHHHHCCCCSS-CHHHHHHH
T ss_pred CCEEEeCCCCcccHHHHHHHHHHHhCCCcccccccCC----CCC-----chhhhcCCHHHHHHHhCCCCCC-CHHHHHHH
Confidence 669999999999999999999999997632 111100 001 11234577888865 9999999 59999998
Q ss_pred Hh
Q 020476 323 IM 324 (325)
Q Consensus 323 ~~ 324 (325)
++
T Consensus 307 ~~ 308 (336)
T 2hun_A 307 TI 308 (336)
T ss_dssp HH
T ss_pred HH
Confidence 86
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=283.21 Aligned_cols=288 Identities=23% Similarity=0.266 Sum_probs=216.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhC---C---CeEEEEecCCCc--ccccCC--CCCccccCceeecCCchhHhhhCCCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD---N---HQVRVLTRSRSK--AELIFP--GKKTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~---g---~~V~~~~r~~~~--~~~~~~--~~~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
|||||||||||||++++++|+++ | ++|++++|+... ...+.. ......+..+|+.|++.+.+++.++|+|
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~V 80 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhcCCCEE
Confidence 68999999999999999999996 8 999999997532 111110 0011123457888999999999999999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAE 167 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k 167 (325)
||||+.... .....++..++++|+.++.+++++|++ .+++++||+||.++ ||.....+++|+++. ...| .+|
T Consensus 81 ih~A~~~~~-~~~~~~~~~~~~~Nv~~~~~l~~a~~~--~~~~~~v~~SS~~v--yg~~~~~~~~E~~~~~~~~~Y~~sK 155 (337)
T 1r6d_A 81 VHFAAESHV-DRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK 155 (337)
T ss_dssp EECCSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred EECCCccCc-hhhhhCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEecchHH--hCCCCCCCCCCCCCCCCCCchHHHH
Confidence 999996421 112234567889999999999999999 67889999999998 987766778887764 3457 778
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
...|.....+..+.+++++++||+++||++.... .+.+.+ ....+.++ +++.+.++++|++|+|++++.+++++
T Consensus 156 ~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 234 (337)
T 1r6d_A 156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (337)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCC-ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC
Confidence 8788777776666799999999999999975321 223222 33445443 67788899999999999999999876
Q ss_pred CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHH
Q 020476 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL 320 (325)
Q Consensus 243 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l 320 (325)
..+++||+++++++|+.|+++.+.+.+|.+.. +..... ..+ ......++++|++ .|||+|+++ ++++|
T Consensus 235 ~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~-----~~~~~~~d~~k~~~~lG~~p~~~-~~e~l 304 (337)
T 1r6d_A 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVAD----RKG-----HDLRYSLDGGKIERELGYRPQVS-FADGL 304 (337)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEECC----CTT-----CCCBCCBCCHHHHHHHCCCCCSC-HHHHH
T ss_pred CCCCEEEeCCCCCccHHHHHHHHHHHhCCCcccceecCC----CCC-----CcceeecCHHHHHHHcCCCCCCC-HHHHH
Confidence 65679999999999999999999999997621 111000 000 1112347788886 599999994 99999
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
++++
T Consensus 305 ~~~~ 308 (337)
T 1r6d_A 305 ARTV 308 (337)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9876
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-40 Score=285.31 Aligned_cols=295 Identities=15% Similarity=0.102 Sum_probs=218.2
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc--cCC--CCCccccCceeecCCchhHhhhCC--CCE
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFP--GKKTRFFPGVMIAEEPQWRDCIQG--STA 89 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~~d~~d~~~~~~~~~~--~d~ 89 (325)
-+.++|+||||||+||||++++++|+++|++|++++|++..... ... ......+..+|+.|.+.+.+++++ +|+
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 89 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQE 89 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCE
Confidence 34567899999999999999999999999999999998754210 000 000111345788899999988874 799
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-H
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN--DY-L 165 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~ 165 (325)
|||+|+.... .....++...+++|+.++.+++++|++ .++ +++||+||.++ ||.....+++|+++..+ .| .
T Consensus 90 Vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~ 164 (335)
T 1rpn_A 90 VYNLAAQSFV-GASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGV 164 (335)
T ss_dssp EEECCSCCCH-HHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHH
T ss_pred EEECccccch-hhhhhChHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEeCHHH--hCCCCCCCCCcccCCCCCChhHH
Confidence 9999996421 111335678899999999999999998 565 89999999988 99877778888887544 57 7
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHH-HH-HHHcCCC----CCCCcceeeeccHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~-~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+|...|.....+..+.+++++++||+.+||++.... ...+. .+ ....+.+ ++++++.++++|++|+|++++.
T Consensus 165 sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~ 244 (335)
T 1rpn_A 165 AKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWL 244 (335)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHH
Confidence 788888777777666799999999999999975321 11122 22 3334442 2677889999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccc
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYR 314 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~ 314 (325)
+++++. .++||+++++++|+.|+++.+.+.+|.+.. ++.+... ..+.......++++|++ +|||+|++
T Consensus 245 ~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~-------~~~~~~~~~~~d~~k~~~~lG~~p~~- 315 (335)
T 1rpn_A 245 MLQQDK-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAF-------FRPAEVDVLLGNPAKAQRVLGWKPRT- 315 (335)
T ss_dssp HHHSSS-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGG-------CCSSCCCBCCBCTHHHHHHHCCCCCS-
T ss_pred HHhcCC-CCEEEEeCCCCccHHHHHHHHHHHhCCCccccccccccc-------cCCCcchhhcCCHHHHHHhcCCCcCC-
Confidence 998875 589999999999999999999999997621 1221100 00111233556888886 59999999
Q ss_pred cHHHHHHHHh
Q 020476 315 YVKDALKAIM 324 (325)
Q Consensus 315 ~~~~~l~~~~ 324 (325)
+++++|++++
T Consensus 316 ~l~e~l~~~~ 325 (335)
T 1rpn_A 316 SLDELIRMMV 325 (335)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5999999876
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-39 Score=281.42 Aligned_cols=284 Identities=13% Similarity=0.144 Sum_probs=218.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~~ 93 (325)
.|+|||||||||||++|+++|+++| ++|++++|+............ ...+|+.|.+.+.++++ ++|+|||+
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~~~~~~d~Vih~ 122 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL---NIADYMDKEDFLIQIMAGEEFGDVEAIFHE 122 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGTTTS---CCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcccCc---eEeeecCcHHHHHHHHhhcccCCCCEEEEC
Confidence 4789999999999999999999999 999999998754311100000 14578888888888886 59999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCR 170 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~ 170 (325)
|+.... ...++..++++|+.++.+++++|++ .++ ++||+||.++ ||.....+++|+++.. ..| .+|...
T Consensus 123 A~~~~~---~~~~~~~~~~~n~~~~~~ll~a~~~--~~~-r~V~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~~~ 194 (357)
T 2x6t_A 123 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVFGYSKFLF 194 (357)
T ss_dssp CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GCSCSSCCCSSGGGCCCSSHHHHHHHHH
T ss_pred CcccCC---ccCCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEcchHH--hCCCCCCCcCCcCCCCCCChhHHHHHHH
Confidence 996532 3345678899999999999999998 677 9999999998 9877766788877654 357 778888
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCc---ccchHHHH--HHHcCCCC---CCCcc-eeeeccHHHHHHHHHHHHcC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~v~v~D~a~a~~~~~~~ 241 (325)
|.....+..+.+++++++||+++||++... ...++..+ ....+.++ +++.. .+++++++|+|++++.++++
T Consensus 195 E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~ 274 (357)
T 2x6t_A 195 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 274 (357)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHHHHHHHHHHHHhc
Confidence 888777777779999999999999997532 12233322 33445443 56777 89999999999999999988
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCC-C-CCCccHHHHHHHhCccceeeccCcccChhHHHHcCC-CcccccHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-S-WLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYVKD 318 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~-~p~~~~~~~ 318 (325)
+. +++||+++++++|+.|+++.+.+.+|.+ . .++.+.... ........++++|++++|| .|.+ ++++
T Consensus 275 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~~~~k~~~lG~~~~~~-~l~e 344 (357)
T 2x6t_A 275 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLK--------GRYQAFTQADLTNLRAAGYDKPFK-TVAE 344 (357)
T ss_dssp CC-CEEEEESCSCCEEHHHHHHHHHHHHTCCCCEEECCCGGGT--------TSCCSBCCCCCHHHHHTTCCCCCC-CHHH
T ss_pred CC-CCeEEecCCCcccHHHHHHHHHHHcCCCCceecCCCcccc--------cccccccccCHHHHHHcCCCCCCC-CHHH
Confidence 76 7899999999999999999999999986 1 123333110 1122346677888888999 6777 5999
Q ss_pred HHHHHh
Q 020476 319 ALKAIM 324 (325)
Q Consensus 319 ~l~~~~ 324 (325)
+|++++
T Consensus 345 ~l~~~~ 350 (357)
T 2x6t_A 345 GVTEYM 350 (357)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-39 Score=282.74 Aligned_cols=289 Identities=17% Similarity=0.153 Sum_probs=215.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcc--cccCCC-CCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKA--ELIFPG-KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~--~~~~~~-~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
||+||||||+||||++++++|+++ |++|++++|+.... ...... .....+..+|+.|.+.+.++++++|+|||||
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A 83 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHYA 83 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHHhhcCCEEEECC
Confidence 579999999999999999999998 89999999975321 111100 0111234578889999999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC------------ceecCCCCCC-
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET------------EVFDESSPSG- 161 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~------------~~~~e~~~~~- 161 (325)
+.... .....++...+++|+.++.+++++|.+ .++ ++||+||.++ ||.... .+++|+++..
T Consensus 84 ~~~~~-~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~-~~v~~SS~~v--yg~~~~~~~~~~~~~~~~~~~~E~~~~~~ 157 (348)
T 1oc2_A 84 AESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YDI-RFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNYNP 157 (348)
T ss_dssp SCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCCCC
T ss_pred cccCc-cchhhCHHHHHHHHHHHHHHHHHHHHH--hCC-eEEEecccce--eCCCcccccccccccccCCCcCCCCCCCC
Confidence 96421 112234567889999999999999998 566 9999999998 875432 5678877643
Q ss_pred -Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHH
Q 020476 162 -NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 162 -~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a 234 (325)
..| .+|...|.....+..+.+++++++||+.+||++.... .+++.+ ....+.++ +++...++++|++|+|++
T Consensus 158 ~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~ 236 (348)
T 1oc2_A 158 SSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG 236 (348)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCcc-chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHH
Confidence 457 7788888777776666799999999999999975322 222222 33445543 677888999999999999
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcc
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFK 312 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~ 312 (325)
++.+++++..+++||++++.++|+.|+++.+.+.+|.+.. +..... ..+ ......++++|+++ |||+|+
T Consensus 237 ~~~~~~~~~~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~----~~~-----~~~~~~~d~~k~~~~lG~~p~ 307 (348)
T 1oc2_A 237 VWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTD----RAG-----HDLRYAIDASKLRDELGWTPQ 307 (348)
T ss_dssp HHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECC----CTT-----CCCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHhhCCCCCCeEEeCCCCCCCHHHHHHHHHHHhCCCccccccCCC----CCC-----cccccccCHHHHHHHcCCCCC
Confidence 9999987655669999999999999999999999997632 211100 000 11234577888865 999999
Q ss_pred cccHHHHHHHHh
Q 020476 313 YRYVKDALKAIM 324 (325)
Q Consensus 313 ~~~~~~~l~~~~ 324 (325)
+++++++|++++
T Consensus 308 ~~~~~~~l~~~~ 319 (348)
T 1oc2_A 308 FTDFSEGLEETI 319 (348)
T ss_dssp CCCHHHHHHHHH
T ss_pred CCcHHHHHHHHH
Confidence 944999999876
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=276.85 Aligned_cols=280 Identities=14% Similarity=0.159 Sum_probs=203.5
Q ss_pred eEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCccc--ccCCCCCccccCceeecCCchhHhhhCC-----CCEEEEC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQG-----STAVVNL 93 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~d~~~~~~~~~~-----~d~vi~~ 93 (325)
+|||||||||||++++++|+++| ++|++++|++.... ..... ...+|+.|.+.+.+++++ +|+|||+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~~~-----~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 75 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDL-----NIADYMDKEDFLIQIMAGEEFGDVEAIFHE 75 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHTS-----CCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcCcc-----eeccccccHHHHHHHHhccccCCCcEEEEC
Confidence 58999999999999999999999 99999999875431 11110 135788888889888875 9999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCR 170 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~ 170 (325)
|+.... ...++..++++|+.++.+++++|++ .++ ++||+||.++ ||.....+++|+++..+ .| .+|...
T Consensus 76 a~~~~~---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~p~~~Y~~sK~~~ 147 (310)
T 1eq2_A 76 GACSST---TEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLF 147 (310)
T ss_dssp CSCCCT---TCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred cccccC---cccCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEeeHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHH
Confidence 996532 3345678899999999999999998 677 9999999988 98777667888776543 57 778888
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCc---ccchHHHH--HHHcCCCC---CCCcc-eeeeccHHHHHHHHHHHHcC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGA---LAKMIPLF--MMFAGGPL---GSGQQ-WFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~---~~~~~~~~--~~~~~~~~---~~~~~-~~~~v~v~D~a~a~~~~~~~ 241 (325)
|.....+..+.+++++++||+++||++... ...++..+ ....+.++ +++.. .++++|++|+|++++.++++
T Consensus 148 e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~ 227 (310)
T 1eq2_A 148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 227 (310)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhc
Confidence 887777777779999999999999997542 12233322 33444442 56777 89999999999999999988
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCC--CCCCccHHHHHHHhCccceeeccCcccChhHHHHcCC-CcccccHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRP--SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGF-PFKYRYVKD 318 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~-~p~~~~~~~ 318 (325)
+. +++||+++++++|+.|+++.+.+.+|.+ ..++.+... .........++++|++++|| .|.+ ++++
T Consensus 228 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~lG~~~~~~-~l~~ 297 (310)
T 1eq2_A 228 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKL--------KGRYQAFTQADLTNLRAAGYDKPFK-TVAE 297 (310)
T ss_dssp CC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCC-CHHH
T ss_pred CC-CCeEEEeCCCccCHHHHHHHHHHHcCCCCceeCCCChhh--------hcccccccccchHHHHhcCCCCCCC-CHHH
Confidence 76 7899999999999999999999999976 112222211 01123346678888888999 7777 5999
Q ss_pred HHHHHh
Q 020476 319 ALKAIM 324 (325)
Q Consensus 319 ~l~~~~ 324 (325)
+|++++
T Consensus 298 ~l~~~~ 303 (310)
T 1eq2_A 298 GVTEYM 303 (310)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999886
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-38 Score=277.97 Aligned_cols=282 Identities=16% Similarity=0.135 Sum_probs=208.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~ 95 (325)
..||+||||||+||||++++++|+++|++|++++|+...............+..+|+.|.+.+.+++++ +|+|||||+
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~ 98 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAA 98 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCC
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECce
Confidence 356899999999999999999999999999999998654322111101112446788999999999887 999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeec----CCCCceecCCCCCC-Cch-HHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYG----TSETEVFDESSPSG-NDY-LAEVC 169 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g----~~~~~~~~e~~~~~-~~y-~~k~~ 169 (325)
..... ...++. +++|+.++.+++++|.+ .+++++||+||.++ || .... +++|++.+. ..| .+|..
T Consensus 99 ~~~~~--~~~~~~--~~~N~~~~~~l~~a~~~--~~~~~iV~~SS~~~--~g~~~~~~~~-~~~E~~~p~~~~Y~~sK~~ 169 (333)
T 2q1w_A 99 SYKDP--DDWYND--TLTNCVGGSNVVQAAKK--NNVGRFVYFQTALC--YGVKPIQQPV-RLDHPRNPANSSYAISKSA 169 (333)
T ss_dssp CCSCT--TCHHHH--HHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GCSCCCSSSB-CTTSCCCCTTCHHHHHHHH
T ss_pred ecCCC--ccCChH--HHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCcccCCC-CcCCCCCCCCCchHHHHHH
Confidence 75321 223333 88999999999999998 67889999999988 88 5444 777776444 567 67766
Q ss_pred HHHHHHH-HhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCC
Q 020476 170 REWEGTA-LKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYR 245 (325)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~ 245 (325)
.|..... +. +++++||+++||++.. ..+.+.+ ....+.++ + +...+++++++|+|++++.+++++. +
T Consensus 170 ~E~~~~~s~~-----~~~ilR~~~v~gp~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~i~v~Dva~ai~~~~~~~~-g 240 (333)
T 2q1w_A 170 NEDYLEYSGL-----DFVTFRLANVVGPRNV--SGPLPIFFQRLSEGKKCFV-TKARRDFVFVKDLARATVRAVDGVG-H 240 (333)
T ss_dssp HHHHHHHHTC-----CEEEEEESEEESTTCC--SSHHHHHHHHHHTTCCCEE-EECEECEEEHHHHHHHHHHHHTTCC-C
T ss_pred HHHHHHhhhC-----CeEEEeeceEECcCCc--CcHHHHHHHHHHcCCeeeC-CCceEeeEEHHHHHHHHHHHHhcCC-C
Confidence 6655544 32 8999999999999832 2233322 22333333 4 6678899999999999999998876 7
Q ss_pred ceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 246 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 246 ~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
++||++++.++|+.|+++.+.+.+|.+.....|... ...........++++|++++||+|++ +++++|++++
T Consensus 241 ~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~------~~~~~~~~~~~~d~~k~~~~G~~p~~-~~~~~l~~~~ 312 (333)
T 2q1w_A 241 GAYHFSSGTDVAIKELYDAVVEAMALPSYPEPEIRE------LGPDDAPSILLDPSRTIQDFGKIEFT-PLKETVAAAV 312 (333)
T ss_dssp EEEECSCSCCEEHHHHHHHHHHHTTCSSCCCCEEEE------CCTTSCCCCCBCCHHHHHHHCCCCCC-CHHHHHHHHH
T ss_pred CEEEeCCCCCccHHHHHHHHHHHhCCCCceeCCCCC------cccccccccccCCHHHHHhcCCCcCC-CHHHHHHHHH
Confidence 799999999999999999999999976211222111 11111224577888999777999998 5999999876
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.2e-39 Score=274.86 Aligned_cols=272 Identities=23% Similarity=0.235 Sum_probs=200.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
|||||||||| ||||++|+++|+++|++|++++|++.+...+.... ..+..+|+.|.+ ++++|+|||+|+...
T Consensus 4 m~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~-----~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 4 MTGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRASG--AEPLLWPGEEPS-----LDGVTHLLISTAPDS 75 (286)
T ss_dssp -CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHHTT--EEEEESSSSCCC-----CTTCCEEEECCCCBT
T ss_pred CcCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhhCC--CeEEEecccccc-----cCCCCEEEECCCccc
Confidence 5689999998 99999999999999999999999876543322111 013345666643 789999999998642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
.. ...+.++++++++...+++++||+||.++ ||...+.+++|+++..+ .| .+|...|....
T Consensus 76 ~~--------------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~v--yg~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 139 (286)
T 3ius_A 76 GG--------------DPVLAALGDQIAARAAQFRWVGYLSTTAV--YGDHDGAWVDETTPLTPTAARGRWRVMAEQQWQ 139 (286)
T ss_dssp TB--------------CHHHHHHHHHHHHTGGGCSEEEEEEEGGG--GCCCTTCEECTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred cc--------------cHHHHHHHHHHHhhcCCceEEEEeeccee--cCCCCCCCcCCCCCCCCCCHHHHHHHHHHHHHH
Confidence 11 11246788888773336789999999998 99888888999888655 45 56665655554
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC--CCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAP 253 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~ 253 (325)
.+ .+++++++||+++||++......+ ..+.+ +..+.+.++++|++|+|++++.+++++..+++||++++
T Consensus 140 ~~---~~~~~~ilRp~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~g~~~~i~~~ 210 (286)
T 3ius_A 140 AV---PNLPLHVFRLAGIYGPGRGPFSKL------GKGGIRRIIKPGQVFSRIHVEDIAQVLAASMARPDPGAVYNVCDD 210 (286)
T ss_dssp HS---TTCCEEEEEECEEEBTTBSSSTTS------SSSCCCEEECTTCCBCEEEHHHHHHHHHHHHHSCCTTCEEEECCS
T ss_pred hh---cCCCEEEEeccceECCCchHHHHH------hcCCccccCCCCcccceEEHHHHHHHHHHHHhCCCCCCEEEEeCC
Confidence 44 589999999999999986543222 23333 23446789999999999999999999886679999999
Q ss_pred CCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCcc-ceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 254 NPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEG-AFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 254 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
+++|+.|+++.+++.+|.+....++..... .+.. ..+......++++|+++ |||+|++++++++|+++++
T Consensus 211 ~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~k~~~~lG~~p~~p~~~e~l~~~~~ 282 (286)
T 3ius_A 211 EPVPPQDVIAYAAELQGLPLPPAVDFDKAD--LTPMARSFYSENKRVRNDRIKEELGVRLKYPNYRVGLEALQA 282 (286)
T ss_dssp CCBCHHHHHHHHHHHHTCCCCCEEEGGGSC--CCHHHHHTTSCCCEECCHHHHHTTCCCCSCSSHHHHHHHHHH
T ss_pred CCccHHHHHHHHHHHcCCCCCcccchhhhc--cChhHHHhhcCCceeehHHHHHHhCCCCCcCCHHHHHHHHHH
Confidence 999999999999999998744333322100 0100 01123567788899976 8999999559999999863
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=281.06 Aligned_cols=290 Identities=19% Similarity=0.222 Sum_probs=214.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc------ccc----cCC-CCCccccCceeecCCchhHhhhC--
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK------AEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ-- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~------~~~----~~~-~~~~~~~~~~d~~d~~~~~~~~~-- 85 (325)
|+|+||||||+||||++++++|+++|++|++++|+... ... +.. ......+..+|+.|.+.+.++++
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 80 (348)
T 1ek6_A 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (348)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc
Confidence 45799999999999999999999999999999986543 110 000 00001144578999999999887
Q ss_pred CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC---C
Q 020476 86 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG---N 162 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~---~ 162 (325)
++|+|||+|+..... .....+..++++|+.++.++++++++ .+++++||+||.++ ||.....+++|+++.. .
T Consensus 81 ~~d~vih~A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~E~~~~~p~~~ 155 (348)
T 1ek6_A 81 SFMAVIHFAGLKAVG-ESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTN 155 (348)
T ss_dssp CEEEEEECCSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSS
T ss_pred CCCEEEECCCCcCcc-chhhchHHHHHHHHHHHHHHHHHHHH--hCCCEEEEECcHHH--hCCCCCCCcCCCCCCCCCCC
Confidence 899999999964211 12345678899999999999999998 67889999999988 9877777888988743 4
Q ss_pred ch-HHHHHHHHHHHHHhhc-CCceEEEEEeceEEcCCC------Cc---ccchHHHH-HHH--cCCCC---C------CC
Q 020476 163 DY-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDG------GA---LAKMIPLF-MMF--AGGPL---G------SG 219 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~i~g~~~------~~---~~~~~~~~-~~~--~~~~~---~------~~ 219 (325)
.| .+|...|.....+..+ .+++++++||+++||++. .. ...+.+.+ ... .+.++ + ++
T Consensus 156 ~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g 235 (348)
T 1ek6_A 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (348)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred chHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCC
Confidence 57 7787777777666655 249999999999999842 11 12344433 222 23322 2 56
Q ss_pred cceeeeccHHHHHHHHHHHHcCC--CCC-ceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeecc
Q 020476 220 QQWFSWIHLDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE 295 (325)
Q Consensus 220 ~~~~~~v~v~D~a~a~~~~~~~~--~~~-~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (325)
.+.++++|++|+|++++.+++++ ..+ ++||+++++++|+.|+++.+.+.+|.+..+ ..|.. .+. ..
T Consensus 236 ~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~-----~~~-----~~ 305 (348)
T 1ek6_A 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVARR-----EGD-----VA 305 (348)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECCC-----TTC-----CS
T ss_pred ceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCCceeeCCCC-----Ccc-----ch
Confidence 78899999999999999999764 233 699999999999999999999999976322 11110 111 12
Q ss_pred CcccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 296 GQRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 296 ~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
...++++|++ +|||+|+++ ++++|++++
T Consensus 306 ~~~~d~~k~~~~lG~~p~~~-l~~~l~~~~ 334 (348)
T 1ek6_A 306 ACYANPSLAQEELGWTAALG-LDRMCEDLW 334 (348)
T ss_dssp EECBCCHHHHHTTCCCCCCC-HHHHHHHHH
T ss_pred hhccCHHHHHHhcCCCCCCC-HHHHHHHHH
Confidence 3456778885 599999994 999999876
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=278.69 Aligned_cols=280 Identities=18% Similarity=0.194 Sum_probs=208.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec---CCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA---EEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~---d~~~~~~~~~~~d~vi~~a~ 95 (325)
++|+|||||||||||++|+++|+++|++|++++|+........... .++. ..+.+..-+.++|+|||+|+
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-------~~~~~~~~~~~~~~Dl~~~d~vi~~a~ 78 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT-------GKFLEKPVLELEERDLSDVRLVYHLAS 78 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTS-------SEEECSCGGGCCHHHHTTEEEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhh-------hhhccCCCeeEEeCccccCCEEEECCc
Confidence 4679999999999999999999999999999999876311111110 0111 11112222338999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREW 172 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~ 172 (325)
.... ......+...++ |+.++.+++++|++ .+++++||+||.++ ||.....+++|+++.. ..| .+|...|.
T Consensus 79 ~~~~-~~~~~~~~~~~~-n~~~~~~ll~a~~~--~~v~~~v~~SS~~v--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~ 152 (321)
T 3vps_A 79 HKSV-PRSFKQPLDYLD-NVDSGRHLLALCTS--VGVPKVVVGSTCEV--YGQADTLPTPEDSPLSPRSPYAASKVGLEM 152 (321)
T ss_dssp CCCH-HHHTTSTTTTHH-HHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHHHH
T ss_pred cCCh-HHHHhCHHHHHH-HHHHHHHHHHHHHH--cCCCeEEEecCHHH--hCCCCCCCCCCCCCCCCCChhHHHHHHHHH
Confidence 6521 111122344566 99999999999999 67899999999998 9988888899988754 456 78888888
Q ss_pred HHHHHhhcCCc-eEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 173 EGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 173 ~~~~~~~~~~~-~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
....+..+.++ +++++||+.+||++.... .+++.+ ....+.++ +++...++++|++|+|++++.+++++.. |
T Consensus 153 ~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~~~-g 230 (321)
T 3vps_A 153 VAGAHQRASVAPEVGIVRFFNVYGPGERPD-ALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRPLP-S 230 (321)
T ss_dssp HHHHHHHSSSSCEEEEEEECEEECTTCCTT-SHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSCCC-S
T ss_pred HHHHHHHHcCCCceEEEEeccccCcCCCCC-ChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcCCC-C
Confidence 88888777899 999999999999986542 223222 33344442 6788999999999999999999998876 4
Q ss_pred eEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHH-cCCCc-ccccHHHHHHHH
Q 020476 247 VINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDALKAI 323 (325)
Q Consensus 247 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~~~~~l~~~ 323 (325)
+||+++++++|+.|+++.+. .+|.+..+ ..|.. ........++++|+++ |||+| ++ +++++|+++
T Consensus 231 ~~~i~~~~~~s~~e~~~~i~-~~g~~~~~~~~~~~----------~~~~~~~~~d~~k~~~~lG~~p~~~-~~~~~l~~~ 298 (321)
T 3vps_A 231 VVNFGSGQSLSVNDVIRILQ-ATSPAAEVARKQPR----------PNEITEFRADTALQTRQIGERSGGI-GIEEGIRLT 298 (321)
T ss_dssp EEEESCSCCEEHHHHHHHHH-TTCTTCEEEEECCC----------TTCCSBCCBCCHHHHHHHCCCSCCC-CHHHHHHHH
T ss_pred eEEecCCCcccHHHHHHHHH-HhCCCCccccCCCC----------CCCcceeeccHHHHHHHhCCCCCcC-CHHHHHHHH
Confidence 99999999999999999999 99976432 11111 1123356777888875 99999 77 699999988
Q ss_pred hC
Q 020476 324 MS 325 (325)
Q Consensus 324 ~~ 325 (325)
++
T Consensus 299 ~~ 300 (321)
T 3vps_A 299 LE 300 (321)
T ss_dssp HH
T ss_pred HH
Confidence 63
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-39 Score=280.58 Aligned_cols=295 Identities=17% Similarity=0.233 Sum_probs=215.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhhCCCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~~~~d~vi~~a~~~~ 98 (325)
|+|||||||||||++++++|+++ |++|++++|+..+......... ..+..+|+.|. +.+.++++++|+|||||+...
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~d~vih~A~~~~ 79 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT 79 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCC-eEEEeccccCcHHHHHhhccCCCEEEEcccccC
Confidence 68999999999999999999998 8999999998766443322111 12345788874 567788889999999998642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---------CCch-HHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LAEV 168 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---------~~~y-~~k~ 168 (325)
.. ....++...+++|+.++.+++++|++ .+ +++||+||.++ ||.....+++|+++. ...| .+|.
T Consensus 80 ~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~v~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~ 153 (345)
T 2bll_A 80 PI-EYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ 153 (345)
T ss_dssp HH-HHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred cc-chhcCHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecHHH--cCCCCCCCcCCcccccccCcccCcccccHHHHH
Confidence 11 11235667889999999999999998 56 89999999988 987776777887653 1257 6788
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-------cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHH
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~ 236 (325)
..|.....+..+.+++++++||+.+||++.... ..++..+ ....+.++ +++.+.++++|++|+|++++
T Consensus 154 ~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~ 233 (345)
T 2bll_A 154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 233 (345)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHH
Confidence 888777776666699999999999999975321 1222222 34455553 56778899999999999999
Q ss_pred HHHcCCC---CCceEEeeCCC-CCCHHHHHHHHHHHhCCCCC-CCccHHH------HHHHhCccceeeccCcccChhHHH
Q 020476 237 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSW-LPVPEFA------LKAVLGEGAFVVLEGQRVVPARAK 305 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~-~~s~~e~~~~i~~~~g~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~k~~ 305 (325)
.+++++. .+++||+++++ ++|+.|+++.+.+.+|.+.. +..|... ...+.+.. ........++++|++
T Consensus 234 ~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k~~ 312 (345)
T 2bll_A 234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSIRNAH 312 (345)
T ss_dssp HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred HHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcccccCccccccccccchhhcccc-ccchhhhcccHHHHH
Confidence 9998763 35699999986 89999999999999987632 2222210 00001100 011234567888886
Q ss_pred -HcCCCcccccHHHHHHHHh
Q 020476 306 -ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 306 -~lg~~p~~~~~~~~l~~~~ 324 (325)
+|||+|++ +++++|++++
T Consensus 313 ~~lG~~p~~-~l~~~l~~~~ 331 (345)
T 2bll_A 313 RCLDWEPKI-DMQETIDETL 331 (345)
T ss_dssp HHHCCCCCC-CHHHHHHHHH
T ss_pred HhcCCCccc-cHHHHHHHHH
Confidence 59999999 5999999886
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=280.02 Aligned_cols=288 Identities=13% Similarity=0.113 Sum_probs=214.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
|+|+|||||||||||++++++|+++ |++|++++|+....... ... .+..+|+.|.+.+.++++ ++|+|||+|
T Consensus 1 M~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a 76 (312)
T 2yy7_A 1 MNPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVV-NSG---PFEVVNALDFNQIEHLVEVHKITDIYLMA 76 (312)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHH-HSS---CEEECCTTCHHHHHHHHHHTTCCEEEECC
T ss_pred CCceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccccc-CCC---ceEEecCCCHHHHHHHHhhcCCCEEEECC
Confidence 3579999999999999999999998 89999999987553211 111 145679999999999988 899999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC-ceecCCCCC--CCch-HHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET-EVFDESSPS--GNDY-LAEVCR 170 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~-~~~~e~~~~--~~~y-~~k~~~ 170 (325)
+.... ....++...+++|+.++.+++++|++ .+++++||+||.++ |+.... .+.+|+.+. ...| .+|...
T Consensus 77 ~~~~~--~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~~~~~Y~~sK~~~ 150 (312)
T 2yy7_A 77 ALLSA--TAEKNPAFAWDLNMNSLFHVLNLAKA--KKIKKIFWPSSIAV--FGPTTPKENTPQYTIMEPSTVYGISKQAG 150 (312)
T ss_dssp CCCHH--HHHHCHHHHHHHHHHHHHHHHHHHHT--TSCSEEECCEEGGG--CCTTSCSSSBCSSCBCCCCSHHHHHHHHH
T ss_pred ccCCC--chhhChHHHHHHHHHHHHHHHHHHHH--cCCCEEEEeccHHH--hCCCCCCCCccccCcCCCCchhHHHHHHH
Confidence 86421 12345678899999999999999998 78889999999998 886543 456676654 3457 778888
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCcc----cchHHHH-HHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~----~~~~~~~-~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|.....+..+.+++++++||+.+||+...+. ..+...+ ....+++ +++++..++++|++|+|++++.+++++
T Consensus 151 e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~ 230 (312)
T 2yy7_A 151 ERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAP 230 (312)
T ss_dssp HHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCc
Confidence 8777766666699999999999999753211 1233333 3333333 367788899999999999999999886
Q ss_pred CC----CceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHH
Q 020476 243 SY----RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVK 317 (325)
Q Consensus 243 ~~----~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~ 317 (325)
.. +++||+++ +++|+.|+++.+.+.+|... ++..+....... ......++++|+++ |||+|++ +++
T Consensus 231 ~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~~~-i~~~~~~~~~~~------~~~~~~~d~~k~~~~lG~~p~~-~l~ 301 (312)
T 2yy7_A 231 VEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPEFT-ITYEPDFRQKIA------DSWPASIDDSQAREDWDWKHTF-DLE 301 (312)
T ss_dssp GGGCCCSSCEECCS-EEECHHHHHHHHHTTCTTCE-EEECCCTHHHHH------TTSCSSBCCHHHHHHHCCCCCC-CHH
T ss_pred ccccccCceEEeCC-CccCHHHHHHHHHHHCCCCc-eEeccCcccccc------ccccccCCHHHHHHHcCCCCCC-CHH
Confidence 53 37999996 78999999999999998421 111110000000 01234678888865 9999999 599
Q ss_pred HHHHHHhC
Q 020476 318 DALKAIMS 325 (325)
Q Consensus 318 ~~l~~~~~ 325 (325)
++|+++++
T Consensus 302 ~~l~~~~~ 309 (312)
T 2yy7_A 302 SMTKDMIE 309 (312)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999863
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-38 Score=281.66 Aligned_cols=290 Identities=16% Similarity=0.176 Sum_probs=215.1
Q ss_pred CCeEEEECCCchHHHHHHHHHH-hCCCeEEEEecCCCcc---------cccC-------CC--CCc---cccCceeecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKA---------ELIF-------PG--KKT---RFFPGVMIAEE 77 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~---------~~~~-------~~--~~~---~~~~~~d~~d~ 77 (325)
.|+||||||+||||++++++|+ ++|++|++++|+.... ..+. .. ... ..+..+|+.|+
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 81 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCH
Confidence 4699999999999999999999 9999999999976442 1110 00 000 12446788999
Q ss_pred chhHhhhC--C-CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC----
Q 020476 78 PQWRDCIQ--G-STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE---- 150 (325)
Q Consensus 78 ~~~~~~~~--~-~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~---- 150 (325)
+.+.++++ + +|+|||||+..... .....+..++++|+.++.+++++|++ .+++++||+||.++ ||...
T Consensus 82 ~~~~~~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~~~~Nv~g~~~ll~a~~~--~~~~~iv~~SS~~v--~g~~~~~~~ 156 (397)
T 1gy8_A 82 DFLNGVFTRHGPIDAVVHMCAFLAVG-ESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV 156 (397)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred HHHHHHHHhcCCCCEEEECCCccCcC-cchhhHHHHHHHHhHHHHHHHHHHHH--hCCCEEEEECCHHH--hCCCCcccc
Confidence 99988887 6 99999999964211 12345678899999999999999998 68889999999988 88665
Q ss_pred ---CceecCCCCCC--Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCC--------cccchHHHH------HH
Q 020476 151 ---TEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--------ALAKMIPLF------MM 210 (325)
Q Consensus 151 ---~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~--------~~~~~~~~~------~~ 210 (325)
..+++|+++.. ..| .+|...|.....+..+.+++++++||+++||++.. ....+++.+ +.
T Consensus 157 ~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (397)
T 1gy8_A 157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI 236 (397)
T ss_dssp --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred cccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHHHHH
Confidence 56788888753 457 77888887777776666999999999999999631 112333332 22
Q ss_pred HcCC------------CC---C------CCcceeeeccHHHHHHHHHHHHcCCC-C-----C---ceEEeeCCCCCCHHH
Q 020476 211 FAGG------------PL---G------SGQQWFSWIHLDDIVNLIYEALSNPS-Y-----R---GVINGTAPNPVRLAE 260 (325)
Q Consensus 211 ~~~~------------~~---~------~~~~~~~~v~v~D~a~a~~~~~~~~~-~-----~---~~~~~~~~~~~s~~e 260 (325)
..+. ++ + ++.+.++++|++|+|++++.+++.+. . . ++||+++++++|+.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e 316 (397)
T 1gy8_A 237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE 316 (397)
T ss_dssp SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred HhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCcccHHH
Confidence 2232 21 2 67788999999999999999997532 2 3 799999999999999
Q ss_pred HHHHHHHHhCCCCCCC-ccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 261 MCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 261 ~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
+++.+.+.+|.+..+. .+. ..+. .....++++|++ .|||+|++++++++|++++
T Consensus 317 ~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~~~~~d~~k~~~~lG~~p~~~~l~e~l~~~~ 372 (397)
T 1gy8_A 317 VIEVARKTTGHPIPVRECGR-----REGD-----PAYLVAASDKAREVLGWKPKYDTLEAIMETSW 372 (397)
T ss_dssp HHHHHHHHHCCCCCEEEECC-----CTTC-----CSEECBCCHHHHHHTCCCCSCCSHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCeeeCCC-----CCCc-----ccccccCHHHHHHHhCCCCCcCCHHHHHHHHH
Confidence 9999999999763221 111 0111 123456778885 6999999945999999876
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-38 Score=279.97 Aligned_cols=296 Identities=16% Similarity=0.176 Sum_probs=215.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCC--cccccCCC--CCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRS--KAELIFPG--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~--~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
||||||||+||||++++++|++. |++|++++|+.. ....+... .....+..+|+.|.+.+.++++ ++|+||||
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 80 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhhhhhcCCCeEEEECCCCCHHHHHHHHhhcCCCEEEEC
Confidence 68999999999999999999998 799999999752 22222111 0011234578889999999987 89999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCC--CCC-------CEEEEeeeeeeeecCCCC--c--------ee
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE--GVR-------PSVLVSATALGYYGTSET--E--------VF 154 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~~~-------~~v~~Ss~~v~~~g~~~~--~--------~~ 154 (325)
|+... ......++..++++|+.++.+++++|.+ . +++ ++||+||.++ ||.... . ++
T Consensus 81 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~v~~~~~~~~~iv~~SS~~v--~g~~~~~~~~~~~~~~~~~ 155 (361)
T 1kew_A 81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARK--YWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLF 155 (361)
T ss_dssp CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHH--HHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCB
T ss_pred CCCcC-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hccCcccccccCceEEEeCCHHH--hCCCcccccccccccCCCC
Confidence 99642 1112345677899999999999999998 5 666 9999999988 886542 1 67
Q ss_pred cCCCCC--CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeec
Q 020476 155 DESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWI 226 (325)
Q Consensus 155 ~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v 226 (325)
+|+++. ...| .+|...|.....+..+.+++++++||+.+||++.... .+.+.+ ....+.++ +++...++++
T Consensus 156 ~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 234 (361)
T 1kew_A 156 TETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWL 234 (361)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEE
T ss_pred CCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcc-cHHHHHHHHHHcCCCceEcCCCceeEeeE
Confidence 787764 3457 7788888777777666699999999999999975321 222222 33345443 6778889999
Q ss_pred cHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH
Q 020476 227 HLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE 306 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 306 (325)
|++|+|++++.+++++..+++||+++++++|+.|+++.+.+.+|.+.....|....-..... .........++++|+++
T Consensus 235 ~v~Dva~a~~~~~~~~~~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~~~~~p~~~~~~~~~~-~~~~~~~~~~d~~k~~~ 313 (361)
T 1kew_A 235 YVEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQITYVAD-RPGHDRRYAIDAGKISR 313 (361)
T ss_dssp EHHHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEEEECC-CTTCCCBCCBCCHHHHH
T ss_pred EHHHHHHHHHHHHhCCCCCCEEEecCCCeeeHHHHHHHHHHHhCCcCccccccccceeecCC-CCcccceeecCHHHHHH
Confidence 99999999999998765566999999999999999999999998653211121100000000 00011234678888965
Q ss_pred -cCCCcccccHHHHHHHHh
Q 020476 307 -LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 307 -lg~~p~~~~~~~~l~~~~ 324 (325)
|||+|++ +++++|++++
T Consensus 314 ~lG~~p~~-~~~e~l~~~~ 331 (361)
T 1kew_A 314 ELGWKPLE-TFESGIRKTV 331 (361)
T ss_dssp HHCCCCSC-CHHHHHHHHH
T ss_pred HhCCCCcc-CHHHHHHHHH
Confidence 9999999 5999999886
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-38 Score=274.21 Aligned_cols=287 Identities=19% Similarity=0.211 Sum_probs=207.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..+|+|||||||||||++|+++|+++|++|++++|+............ ...++++...|.....+.++|+|||+|+..
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--~~~~~~~~~~D~~~~~~~~~d~vih~A~~~ 102 (343)
T 2b69_A 25 KDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWI--GHENFELINHDVVEPLYIEVDQIYHLASPA 102 (343)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGT--TCTTEEEEECCTTSCCCCCCSEEEECCSCC
T ss_pred cCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhc--cCCceEEEeCccCChhhcCCCEEEECcccc
Confidence 346799999999999999999999999999999997543221111000 012344443333344567899999999964
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC-----CCC--Cch-HHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----PSG--NDY-LAEVC 169 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-----~~~--~~y-~~k~~ 169 (325)
.... ...++...+++|+.++.+++++|++ .++ ++||+||.++ ||.....+++|+. +.. ..| .+|..
T Consensus 103 ~~~~-~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~g~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~ 176 (343)
T 2b69_A 103 SPPN-YMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRV 176 (343)
T ss_dssp SHHH-HTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHH
T ss_pred Cchh-hhhCHHHHHHHHHHHHHHHHHHHHH--hCC-cEEEECcHHH--hCCCCCCCCcccccccCCCCCCCCchHHHHHH
Confidence 2111 1234567889999999999999998 565 8999999988 9877667777763 322 246 67877
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.|.....+..+.+++++++||+.+||++.... ..++..+ ....+.++ +++...++++|++|+|++++.+++.+.
T Consensus 177 ~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~~ 256 (343)
T 2b69_A 177 AETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSNV 256 (343)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcCC
Confidence 77777666666699999999999999974321 1222222 33455553 677889999999999999999998764
Q ss_pred CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHH
Q 020476 244 YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALK 321 (325)
Q Consensus 244 ~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~ 321 (325)
+++||+++++++|+.|+++.+.+.+|.+..+ ..|... . ......++++|++ .|||+|++ +++++|+
T Consensus 257 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~p~~~-----~-----~~~~~~~d~~k~~~~lG~~p~~-~l~e~l~ 324 (343)
T 2b69_A 257 -SSPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEAQ-----D-----DPQKRKPDIKKAKLMLGWEPVV-PLEEGLN 324 (343)
T ss_dssp -CSCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCCT-----T-----CCCCCCBCCHHHHHHHCCCCCS-CHHHHHH
T ss_pred -CCeEEecCCCCCcHHHHHHHHHHHhCCCCCceeCCCCC-----C-----CCceecCCHHHHHHHcCCCCCC-CHHHHHH
Confidence 6799999999999999999999999976432 222110 0 1123556778886 59999998 5999999
Q ss_pred HHh
Q 020476 322 AIM 324 (325)
Q Consensus 322 ~~~ 324 (325)
+++
T Consensus 325 ~~~ 327 (343)
T 2b69_A 325 KAI 327 (343)
T ss_dssp HHH
T ss_pred HHH
Confidence 886
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-38 Score=280.65 Aligned_cols=291 Identities=19% Similarity=0.188 Sum_probs=208.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-----------------ccC----CCCCccccCceeecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----------------LIF----PGKKTRFFPGVMIAEE 77 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------~~~----~~~~~~~~~~~d~~d~ 77 (325)
.+|+||||||+||||++|+++|+++|++|++++|...... ... .......+..+|+.|.
T Consensus 10 ~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~Dl~d~ 89 (404)
T 1i24_A 10 HGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDF 89 (404)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSH
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccCCceEEEECCCCCH
Confidence 4579999999999999999999999999999998543210 000 0000011445788899
Q ss_pred chhHhhhCC--CCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCc
Q 020476 78 PQWRDCIQG--STAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETE 152 (325)
Q Consensus 78 ~~~~~~~~~--~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~ 152 (325)
+.+.+++++ +|+|||+||..... ..........+++|+.++.+++++|++ .+. +++||+||.++ ||... .
T Consensus 90 ~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~~~V~~SS~~v--yg~~~-~ 164 (404)
T 1i24_A 90 EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPN-I 164 (404)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCS-S
T ss_pred HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHH--hCCCcEEEEeCcHHH--hCCCC-C
Confidence 999988886 99999999964221 112222345789999999999999998 565 59999999988 88654 3
Q ss_pred eecCC--------------CC--CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--------------
Q 020476 153 VFDES--------------SP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------------- 201 (325)
Q Consensus 153 ~~~e~--------------~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-------------- 201 (325)
+++|+ .+ +...| .+|...|.....+....+++++++||+.|||++....
T Consensus 165 ~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~ 244 (404)
T 1i24_A 165 DIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDA 244 (404)
T ss_dssp CBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCST
T ss_pred CCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccccccccc
Confidence 45553 12 34467 7788777777666655699999999999999975320
Q ss_pred --cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCC-C--ceEEeeCCCCCCHHHHHHHHHHH---
Q 020476 202 --AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSY-R--GVINGTAPNPVRLAEMCDHLGNV--- 268 (325)
Q Consensus 202 --~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~--~~~~~~~~~~~s~~e~~~~i~~~--- 268 (325)
...+..+ ....+.++ +++.+.++++|++|+|++++.+++++.. + ++||+++ +++|+.|+++.+++.
T Consensus 245 ~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~~~g~~~~yni~~-~~~s~~e~~~~i~~~~~~ 323 (404)
T 1i24_A 245 VFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFT-EQFSVNELASLVTKAGSK 323 (404)
T ss_dssp TTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECS-EEEEHHHHHHHHHHHHHT
T ss_pred chhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcccCCCceEEEECC-CCCcHHHHHHHHHHHHHh
Confidence 1223222 34455553 6788899999999999999999988653 3 4999998 789999999999998
Q ss_pred hCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 269 LGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 269 ~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
+|.+.. ...|... . ........++++|+++|||+|++ ++++++++++
T Consensus 324 ~g~~~~~~~~p~~~-----~---~~~~~~~~~d~~k~~~LG~~p~~-~~~~~l~~~~ 371 (404)
T 1i24_A 324 LGLDVKKMTVPNPR-----V---EAEEHYYNAKHTKLMELGLEPHY-LSDSLLDSLL 371 (404)
T ss_dssp TTCCCCEEEECCSS-----C---SCSSCCCCBCCCHHHHTTCCCCC-CCHHHHHHHH
T ss_pred hCCCccccccCccc-----C---ccccceEecCHHHHHHcCCCcCc-CHHHHHHHHH
Confidence 676532 1222110 0 01122345677888899999998 5999998875
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-38 Score=280.90 Aligned_cols=298 Identities=15% Similarity=0.112 Sum_probs=218.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-----cccCC-----CCCccccCceeecCCchhHhhhCC--C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQG--S 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~-----~~~~~~~~~~d~~d~~~~~~~~~~--~ 87 (325)
||+||||||+||||++++++|+++|++|++++|++... ..+.. ......+..+|+.|.+.+.+++++ +
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 103 (375)
T 1t2a_A 24 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 103 (375)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhccccCCCceEEEccCCCHHHHHHHHHhcCC
Confidence 37899999999999999999999999999999986541 11100 000111345788899999888874 7
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC---CCEEEEeeeeeeeecCCCCceecCCCCCC--C
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPSG--N 162 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~---~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~ 162 (325)
|+|||||+.... .....++...+++|+.++.++++++++ .++ +++||+||.++ |+.....+++|+++.. .
T Consensus 104 d~vih~A~~~~~-~~~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~~ 178 (375)
T 1t2a_A 104 TEIYNLGAQSHV-KISFDLAEYTADVDGVGTLRLLDAVKT--CGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPRS 178 (375)
T ss_dssp SEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCCS
T ss_pred CEEEECCCcccc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCccceEEEecchhh--hCCCCCCCCCccCCCCCCC
Confidence 999999996421 112345678899999999999999998 565 79999999998 9877777888887653 4
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc--ccchH-HHH-HHHcCCC----CCCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMI-PLF-MMFAGGP----LGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~--~~~~~-~~~-~~~~~~~----~~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...|.....+..+.+++++++||+.+||++... ....+ ..+ ....+.. ++++++.++++|++|+|+
T Consensus 179 ~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~ 258 (375)
T 1t2a_A 179 PYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVE 258 (375)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHH
Confidence 57 778888877777776679999999999999996432 11112 222 2334432 367788999999999999
Q ss_pred HHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC---ccHHHHHHHh-------Cc--cceeeccCcccCh
Q 020476 234 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVL-------GE--GAFVVLEGQRVVP 301 (325)
Q Consensus 234 a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~-------~~--~~~~~~~~~~~~~ 301 (325)
+++.+++++. .++||+++++++|+.|+++.+++.+|.+..+. +|.+.+.... .. ..+.......+++
T Consensus 259 a~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 337 (375)
T 1t2a_A 259 AMWLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDC 337 (375)
T ss_dssp HHHHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCC
T ss_pred HHHHHHhcCC-CceEEEeCCCcccHHHHHHHHHHHhCCCcccccccccccccccccccceeecCcccCCcccchhhcCCH
Confidence 9999998875 58999999999999999999999999763221 2221110000 00 0011123355688
Q ss_pred hHHH-HcCCCcccccHHHHHHHHh
Q 020476 302 ARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 302 ~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
+|++ +|||+|++ +++++|++++
T Consensus 338 ~k~~~~lG~~p~~-~l~e~l~~~~ 360 (375)
T 1t2a_A 338 TKAKQKLNWKPRV-AFDELVREMV 360 (375)
T ss_dssp HHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred HHHHHhcCCCccC-CHHHHHHHHH
Confidence 8896 59999999 5999999876
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-38 Score=276.39 Aligned_cols=288 Identities=16% Similarity=0.137 Sum_probs=209.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCCCCccccCceeecCCchhHhhhCC--CCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~ 92 (325)
||+|||||||||||++++++|+++|++|++++|+..... .+.... ...+..+|+.|.+.+.+++++ +|+|||
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~Dl~d~~~~~~~~~~~~~d~vih 79 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLG-NFEFVHGDIRNKNDVTRLITKYMPDSCFH 79 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhccCC-ceEEEEcCCCCHHHHHHHHhccCCCEEEE
Confidence 579999999999999999999999999999998542211 111100 011446799999999999987 999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-CEEEEeeeeeeeecCCCCce----------------ec
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEV----------------FD 155 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~~v~~Ss~~v~~~g~~~~~~----------------~~ 155 (325)
+|+.... .....++...+++|+.++.+++++|++ .+++ ++||+||.++ ||.....+ ++
T Consensus 80 ~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~iv~~SS~~v--~g~~~~~~~~e~~~~~~~~~~~~~~~ 154 (347)
T 1orr_A 80 LAGQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV--YGDLEQYKYNETETRYTCVDKPNGYD 154 (347)
T ss_dssp CCCCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GTTCTTSCEEECSSCEEETTCTTCBC
T ss_pred CCcccCh-hhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEeccHHH--hCCCCcCCcccccccccccccccCcc
Confidence 9996421 112345678899999999999999998 5664 8999999988 88654433 44
Q ss_pred CCCCCC--Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHHHH--HHHcCC-----C---CCCCc
Q 020476 156 ESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIPLF--MMFAGG-----P---LGSGQ 220 (325)
Q Consensus 156 e~~~~~--~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~~~--~~~~~~-----~---~~~~~ 220 (325)
|+.+.. ..| .+|...|.....+..+.+++++++||+++||++.... ..++..+ ....+. + .+++.
T Consensus 155 e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~ 234 (347)
T 1orr_A 155 ESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGK 234 (347)
T ss_dssp TTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSC
T ss_pred ccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCCeEEecCCc
Confidence 554433 356 7788788777776666699999999999999975321 1122221 222222 3 26788
Q ss_pred ceeeeccHHHHHHHHHHHHcCC-C-CCceEEeeCCC--CCCHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeecc
Q 020476 221 QWFSWIHLDDIVNLIYEALSNP-S-YRGVINGTAPN--PVRLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLE 295 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~~-~-~~~~~~~~~~~--~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~ 295 (325)
+.+++++++|+|++++.+++++ . .+++||++++. ++|+.|+++.+.+.+|.+..+ ..|. ..+ ...
T Consensus 235 ~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~-----~~~ 304 (347)
T 1orr_A 235 QVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV-----RES-----DQR 304 (347)
T ss_dssp CEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC-----CSS-----CCS
T ss_pred ceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCCCceeCCC-----CCC-----Ccc
Confidence 8999999999999999999862 2 34599999986 499999999999999976332 2221 011 112
Q ss_pred CcccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 296 GQRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 296 ~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
...++++|++ .|||+|++ +++++|++++
T Consensus 305 ~~~~d~~k~~~~lG~~p~~-~~~e~l~~~~ 333 (347)
T 1orr_A 305 VFVADIKKITNAIDWSPKV-SAKDGVQKMY 333 (347)
T ss_dssp EECBCCHHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred eeecCHHHHHHHHCCCccC-CHHHHHHHHH
Confidence 3456778885 59999998 5999999886
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=269.11 Aligned_cols=279 Identities=15% Similarity=0.166 Sum_probs=184.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
|+|+|||||||||||++++++|+++|++|++++|+.... . ...+|+.|++.+.++++ ++|+|||||+.
T Consensus 1 m~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-------~---~~~~Dl~d~~~~~~~~~~~~~d~vih~A~~ 70 (315)
T 2ydy_A 1 MNRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRARP-------K---FEQVNLLDSNAVHHIIHDFQPHVIVHCAAE 70 (315)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC----------------------------CHHHHHHHCCSEEEECC--
T ss_pred CCCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCCC-------C---eEEecCCCHHHHHHHHHhhCCCEEEECCcc
Confidence 357999999999999999999999999999999876441 0 34579999999998887 49999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWE 173 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~ 173 (325)
.. ......++...+++|+.++.+++++|.+ .+. ++||+||.++ |+. ...+++|+++.. ..| .+|...|..
T Consensus 71 ~~-~~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--~~~-~~~~~~E~~~~~~~~~Y~~sK~~~e~~ 143 (315)
T 2ydy_A 71 RR-PDVVENQPDAASQLNVDASGNLAKEAAA--VGA-FLIYISSDYV--FDG-TNPPYREEDIPAPLNLYGKTKLDGEKA 143 (315)
T ss_dssp ------------------CHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCS-SSCSBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred cC-hhhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEEchHHH--cCC-CCCCCCCCCCCCCcCHHHHHHHHHHHH
Confidence 42 2223456778899999999999999998 565 9999999998 886 556788887654 346 566666655
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCcccchHH-HH-HHH-cCCCC-CCCcceeeeccHHHHHHHHHHHHcCC----CCC
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIP-LF-MMF-AGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP----SYR 245 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~-~~-~~~-~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~----~~~ 245 (325)
...+ +++++++||+.+||+.......+.. .+ ... .+.++ ..+...++++|++|+|++++.+++++ ..+
T Consensus 144 ~~~~----~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~ 219 (315)
T 2ydy_A 144 VLEN----NLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANMDHWQQRFPTHVKDVATVCRQLAEKRMLDPSIK 219 (315)
T ss_dssp HHHH----CTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEEECSSBBCCEEHHHHHHHHHHHHHHHHTCTTCC
T ss_pred HHHh----CCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeeeccCceECcEEHHHHHHHHHHHHHhhccccCCC
Confidence 5443 4678999999999987642111211 11 222 34443 23467789999999999999998753 456
Q ss_pred ceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHH
Q 020476 246 GVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAI 323 (325)
Q Consensus 246 ~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~ 323 (325)
++||+++++++|+.|+++.+.+.+|.+.. .+.+.. .. ..........++++|++++||+|+++ ++++|+++
T Consensus 220 ~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-----~~-~~~~~~~~~~~d~~k~~~~G~~p~~~-~~~~l~~~ 292 (315)
T 2ydy_A 220 GTFHWSGNEQMTKYEMACAIADAFNLPSSHLRPITDS-----PV-LGAQRPRNAQLDCSKLETLGIGQRTP-FRIGIKES 292 (315)
T ss_dssp EEEECCCSCCBCHHHHHHHHHHHTTCCCTTEEEECSC-----CC-SSSCCCSBCCBCCHHHHHTTCCCCCC-HHHHHHHH
T ss_pred CeEEEcCCCcccHHHHHHHHHHHhCCChhheeccccc-----cc-cccCCCcccccchHHHHhcCCCCCCC-HHHHHHHH
Confidence 79999999999999999999999998742 222220 00 00111235677888998779999995 99999988
Q ss_pred hC
Q 020476 324 MS 325 (325)
Q Consensus 324 ~~ 325 (325)
++
T Consensus 293 ~~ 294 (315)
T 2ydy_A 293 LW 294 (315)
T ss_dssp HG
T ss_pred HH
Confidence 63
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=272.14 Aligned_cols=288 Identities=19% Similarity=0.254 Sum_probs=210.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---C--CCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---G--KKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
|+||||||+||||++++++|+++|++|++++|.......... . .....+..+|+.|++.+.++++ ++|+||||
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~D~vih~ 80 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhhcCCcceEEEccCCCHHHHHHHhhccCCCEEEEC
Confidence 689999999999999999999999999999875432111000 0 0001134578899999988886 59999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---CCch-HHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC 169 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---~~~y-~~k~~ 169 (325)
||..... .....+...+++|+.++.++++++++ .+++++|++||.++ ||.....+++|+.+. ...| .+|..
T Consensus 81 A~~~~~~-~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~g~~~~~~~~e~~~~~~~~~~Y~~sK~~ 155 (338)
T 1udb_A 81 AGLKAVG-ESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDNPKIPYVESFPTGTPQSPYGKSKLM 155 (338)
T ss_dssp CSCCCHH-HHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred CccCccc-cchhcHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEEccHHH--hCCCCCCCcCcccCCCCCCChHHHHHHH
Confidence 9964211 12234567889999999999999988 67889999999988 987766778887764 3467 77887
Q ss_pred HHHHHHHHhhcC-CceEEEEEeceEEcCCCC------c---ccchHHHH-HHHc--CCC---------CCCCcceeeecc
Q 020476 170 REWEGTALKVNK-DVRLALIRIGIVLGKDGG------A---LAKMIPLF-MMFA--GGP---------LGSGQQWFSWIH 227 (325)
Q Consensus 170 ~~~~~~~~~~~~-~~~~~ilRp~~i~g~~~~------~---~~~~~~~~-~~~~--~~~---------~~~~~~~~~~v~ 227 (325)
.|.....+..+. +++++++||+++||+... . ...+.+.+ .... +.+ ..++.+.++++|
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~ 235 (338)
T 1udb_A 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEE
T ss_pred HHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEE
Confidence 887777666555 899999999999998421 1 12334433 2222 221 125678899999
Q ss_pred HHHHHHHHHHHHcCC--CCC-ceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC-ccHHHHHHHhCccceeeccCcccChhH
Q 020476 228 LDDIVNLIYEALSNP--SYR-GVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPAR 303 (325)
Q Consensus 228 v~D~a~a~~~~~~~~--~~~-~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k 303 (325)
++|+|++++.+++++ ..+ ++||+++++++|+.|+++.+.+.+|.+..+. .+. ..+. .....++++|
T Consensus 236 v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~-----~~~~-----~~~~~~d~~k 305 (338)
T 1udb_A 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR-----REGD-----LPAYWADASK 305 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSCCCEEEECC-----CTTC-----CSBCCBCCHH
T ss_pred HHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCCCcceeCCC-----CCCc-----hhhhhcCHHH
Confidence 999999999999753 233 5999999999999999999999999763221 110 0111 1234567788
Q ss_pred HH-HcCCCcccccHHHHHHHHh
Q 020476 304 AK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 304 ~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
++ +|||+|++ +++++|++++
T Consensus 306 ~~~~lG~~p~~-~l~~~l~~~~ 326 (338)
T 1udb_A 306 ADRELNWRVTR-TLDEMAQDTW 326 (338)
T ss_dssp HHHHHCCCCCC-CHHHHHHHHH
T ss_pred HHHHcCCCcCC-CHHHHHHHHH
Confidence 85 59999999 5999999876
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=276.76 Aligned_cols=291 Identities=16% Similarity=0.114 Sum_probs=215.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc--ccCCCC-------C-ccccCceeecCCchhHhhhCC--
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGK-------K-TRFFPGVMIAEEPQWRDCIQG-- 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~-------~-~~~~~~~d~~d~~~~~~~~~~-- 86 (325)
|+|+||||||+||||+++++.|+++|++|++++|+..... ...... . ...+..+|+.|.+.+.+++++
T Consensus 27 M~k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 106 (381)
T 1n7h_A 27 PRKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIK 106 (381)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHC
T ss_pred hCCeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHHHHHHHhcC
Confidence 3469999999999999999999999999999999875421 111100 0 112345788899999888874
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-----CEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-----PSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-----~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+|||||+.... .....++...+++|+.++.+++++|++ .+++ ++||+||.++ ||.... +++|+++..
T Consensus 107 ~d~Vih~A~~~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~~~~~~~~~v~~SS~~v--yg~~~~-~~~E~~~~~ 180 (381)
T 1n7h_A 107 PDEVYNLAAQSHV-AVSFEIPDYTADVVATGALRLLEAVRS--HTIDSGRTVKYYQAGSSEM--FGSTPP-PQSETTPFH 180 (381)
T ss_dssp CSEEEECCSCCCH-HHHHHSHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--GTTSCS-SBCTTSCCC
T ss_pred CCEEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCccCCccEEEEeCcHHH--hCCCCC-CCCCCCCCC
Confidence 7999999996421 112345678899999999999999987 4444 9999999998 987666 888877653
Q ss_pred --Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHH-HH-HHHcCCC----CCCCcceeeeccHHH
Q 020476 162 --NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDD 230 (325)
Q Consensus 162 --~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~-~~-~~~~~~~----~~~~~~~~~~v~v~D 230 (325)
..| .+|...|.....+..+.+++++++|++.+||++.... ...+. .+ ....+.+ ++++...++++|++|
T Consensus 181 ~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~D 260 (381)
T 1n7h_A 181 PRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGD 260 (381)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHH
Confidence 457 7788888777777766789999999999999975321 11121 22 2334432 267788999999999
Q ss_pred HHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHH-c
Q 020476 231 IVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-L 307 (325)
Q Consensus 231 ~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-l 307 (325)
+|++++.+++++. .++||+++++++|+.|+++.+.+.+|.+.. +.+... ...+.......++++|+++ |
T Consensus 261 va~a~~~~~~~~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~-------~~~~~~~~~~~~d~~k~~~~l 332 (381)
T 1n7h_A 261 YVEAMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQR-------YFRPAEVDNLQGDASKAKEVL 332 (381)
T ss_dssp HHHHHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGG-------GSCSSCCCBCCBCCHHHHHHH
T ss_pred HHHHHHHHHhCCC-CCeEEeeCCCCCcHHHHHHHHHHHcCCCcccccccCcc-------cCCccccccccCCHHHHHHhc
Confidence 9999999998865 589999999999999999999999997521 111110 0011112334568888865 9
Q ss_pred CCCcccccHHHHHHHHh
Q 020476 308 GFPFKYRYVKDALKAIM 324 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~ 324 (325)
||+|++ +++++|++++
T Consensus 333 G~~p~~-~l~e~l~~~~ 348 (381)
T 1n7h_A 333 GWKPQV-GFEKLVKMMV 348 (381)
T ss_dssp CCCCCS-CHHHHHHHHH
T ss_pred CCcccC-CHHHHHHHHH
Confidence 999998 5999999876
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.7e-37 Score=270.05 Aligned_cols=289 Identities=16% Similarity=0.098 Sum_probs=210.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-----CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC---CCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-----HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-----~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~---~d~vi~ 92 (325)
|+|||||||||||++++++|+++| ++|++++|++..... .. ....+..+|+.|.+.+.+++++ +|+|||
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~~--~~-~~~~~~~~Dl~d~~~~~~~~~~~~~~d~vih 78 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWH--ED-NPINYVQCDISDPDDSQAKLSPLTDVTHVFY 78 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSCC--CS-SCCEEEECCTTSHHHHHHHHTTCTTCCEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCcccc--cc-CceEEEEeecCCHHHHHHHHhcCCCCCEEEE
Confidence 689999999999999999999999 999999998765431 10 1112445788899999999987 999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEE-------EEeeeeeeeecCC--CCceecCCCCCCC-
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV-------LVSATALGYYGTS--ETEVFDESSPSGN- 162 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v-------~~Ss~~v~~~g~~--~~~~~~e~~~~~~- 162 (325)
||+... .++...+++|+.++.+++++|++...+++++| |+||.++ ||.. ...+++|+++..+
T Consensus 79 ~a~~~~------~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~v--yg~~~~~~~~~~E~~~~~~~ 150 (364)
T 2v6g_A 79 VTWANR------STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFES--YGKIESHDPPYTEDLPRLKY 150 (364)
T ss_dssp CCCCCC------SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGG--TTTSCCCCSSBCTTSCCCSS
T ss_pred CCCCCc------chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhh--ccccccCCCCCCccccCCcc
Confidence 999641 24678889999999999999998322788987 7999988 8865 3457788876433
Q ss_pred --chHHHHHHHHHHHHHhhcCC-ceEEEEEeceEEcCCCCcc-cchHHH--HHH---HcCCCC---CCC---cceeeecc
Q 020476 163 --DYLAEVCREWEGTALKVNKD-VRLALIRIGIVLGKDGGAL-AKMIPL--FMM---FAGGPL---GSG---QQWFSWIH 227 (325)
Q Consensus 163 --~y~~k~~~~~~~~~~~~~~~-~~~~ilRp~~i~g~~~~~~-~~~~~~--~~~---~~~~~~---~~~---~~~~~~v~ 227 (325)
.|+ ..|.....+....+ ++++++||+.+||++.... ..+.+. +.. ..+.++ +++ ...+++++
T Consensus 151 ~~~y~---~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 227 (364)
T 2v6g_A 151 MNFYY---DLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSD 227 (364)
T ss_dssp CCHHH---HHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEE
T ss_pred chhhH---HHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCc
Confidence 342 24555555555556 9999999999999976532 222222 222 245543 444 34578899
Q ss_pred HHHHHHHHHHHHcCCC-CCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-C--CccHHHHHH-------------HhCccc
Q 020476 228 LDDIVNLIYEALSNPS-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-L--PVPEFALKA-------------VLGEGA 290 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~-~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~--~~~~~~~~~-------------~~~~~~ 290 (325)
++|+|++++.+++++. .+++||+++++++|+.|+++.+++.+|.+.. + .+|...... ..+...
T Consensus 228 v~Dva~a~~~~~~~~~~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (364)
T 2v6g_A 228 ADLIAEHHIWAAVDPYAKNEAFNVSNGDVFKWKHFWKVLAEQFGVECGEYEEGVDLKLQDLMKGKEPVWEEIVRENGLTP 307 (364)
T ss_dssp HHHHHHHHHHHHHCGGGTTEEEEECCSCCBCHHHHHHHHHHHHTCCBCCCCTTCCCCHHHHTTTCHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCceEEecCCCcCCHHHHHHHHHHHhCCCCCCCCCCCCccHHHHHhhhHHHHHHHHHHhCCCc
Confidence 9999999999998875 3459999999999999999999999998632 3 444321111 111000
Q ss_pred e---ee----------ccC-cccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 291 F---VV----------LEG-QRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 291 ~---~~----------~~~-~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
. .. ... ..++++|++++||+|.+ +++++|++++
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~lG~~p~~-~~~e~l~~~~ 354 (364)
T 2v6g_A 308 TKLKDVGIWWFGDVILGNECFLDSMNKSKEHGFLGFR-NSKNAFISWI 354 (364)
T ss_dssp CCHHHHCCHHHHHHHHTSCCCCBCCHHHHHTTCCCCC-CHHHHHHHHH
T ss_pred cccccccccchhhhccccchhhcchHHHHhcCCCCCC-CHHHHHHHHH
Confidence 0 00 033 47888999889999988 5999999876
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=274.73 Aligned_cols=299 Identities=16% Similarity=0.122 Sum_probs=215.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCC-------CCccccCceeecCCchhHhhhCC--CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPG-------KKTRFFPGVMIAEEPQWRDCIQG--ST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~-------~~~~~~~~~d~~d~~~~~~~~~~--~d 88 (325)
||+||||||+||||++++++|+++|++|++++|+.+.. ..+... .....+..+|+.|.+.+.+++++ +|
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d 80 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPD 80 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHHHHhhccccCCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 57999999999999999999999999999999986531 111110 01112456789999999888874 79
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC---CCEEEEeeeeeeeecCCCCceecCCCCCC--Cc
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV---RPSVLVSATALGYYGTSETEVFDESSPSG--ND 163 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~---~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~ 163 (325)
+|||||+.... ....+++...+++|+.++.++++++++ .++ +++||+||.++ ||.....+++|+++.. ..
T Consensus 81 ~vih~A~~~~~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~iv~~SS~~v--~g~~~~~~~~E~~~~~~~~~ 155 (372)
T 1db3_A 81 EVYNLGAMSHV-AVSFESPEYTADVDAMGTLRLLEAIRF--LGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSP 155 (372)
T ss_dssp EEEECCCCCTT-TTTTSCHHHHHHHHTHHHHHHHHHHHH--TTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSH
T ss_pred EEEECCcccCc-cccccCHHHHHHHHHHHHHHHHHHHHH--hCCCCCcEEEEeCChhh--hCCCCCCCCCccCCCCCCCh
Confidence 99999996532 223445677889999999999999998 566 79999999988 9877766788887653 45
Q ss_pred h-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc--ccchHH-HH-HHHcCCC----CCCCcceeeeccHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA--LAKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~--~~~~~~-~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a 234 (325)
| .+|...|.....+..+.+++++++|++.+||++... ....+. .+ ....+.+ ++++.+.++++|++|+|++
T Consensus 156 Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a 235 (372)
T 1db3_A 156 YAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKM 235 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHH
Confidence 7 778888877777776678999999999999997432 111222 22 2334432 2677889999999999999
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC---ccHH-HHH---------HHh-------Cc--ccee
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEF-ALK---------AVL-------GE--GAFV 292 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~-~~~---------~~~-------~~--~~~~ 292 (325)
++.+++++. .++||+++++++|+.|+++.+.+.+|.+..+. .|.+ ... ... .. ..+.
T Consensus 236 ~~~~~~~~~-~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (372)
T 1db3_A 236 QWMMLQQEQ-PEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPA 314 (372)
T ss_dssp HHHTTSSSS-CCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCC
T ss_pred HHHHHhcCC-CceEEEcCCCceeHHHHHHHHHHHhCCCcccccccccccccccccccccccccccccceeeccccccCCC
Confidence 999998765 58999999999999999999999999753211 1110 000 000 00 0111
Q ss_pred eccCcccChhHHH-HcCCCcccccHHHHHHHHhC
Q 020476 293 VLEGQRVVPARAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 293 ~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
......++++|++ +|||+|++ +++|+|+++++
T Consensus 315 ~~~~~~~d~~k~~~~lG~~p~~-~l~e~l~~~~~ 347 (372)
T 1db3_A 315 EVETLLGDPTKAHEKLGWKPEI-TLREMVSEMVA 347 (372)
T ss_dssp C-CCCCBCCHHHHHHHCCCCCS-CHHHHHHHHHH
T ss_pred chhhhccCHHHHHHHhCCcccc-CHHHHHHHHHH
Confidence 1223456888896 49999998 59999998863
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-38 Score=271.88 Aligned_cols=270 Identities=12% Similarity=0.076 Sum_probs=204.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~~~~ 98 (325)
|||||||||||||++++++|+ +|++|++++|++. ...+|+.|.+.+.+++++ +|+|||+|+...
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------------~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~~ 66 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA 66 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------------cccccCCCHHHHHHHHHhcCCCEEEECcccCC
Confidence 689999999999999999999 8999999999762 335799999999998875 999999998642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
. .....++...+++|+.++.+++++|++ .++ ++||+||.++ |+.....+++|+++..+ .| .+|...|....
T Consensus 67 ~-~~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~-~~v~~SS~~v--y~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~ 140 (299)
T 1n2s_A 67 V-DKAESEPELAQLLNATSVEAIAKAANE--TGA-WVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKALQ 140 (299)
T ss_dssp H-HHHTTCHHHHHHHHTHHHHHHHHHHTT--TTC-EEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHHH
T ss_pred H-hhhhcCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEecccE--EeCCCCCCCCCCCCCCCccHHHHHHHHHHHHHH
Confidence 1 112345678899999999999999998 565 7999999998 99877778888887544 56 56666665554
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCC--C--CCceE
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNP--S--YRGVI 248 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~--~--~~~~~ 248 (325)
.+. .+++++||+++||++... +...+ ....+.++ ..++..++++|++|+|++++.+++++ . .+++|
T Consensus 141 ~~~----~~~~ilRp~~v~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~ 213 (299)
T 1n2s_A 141 DNC----PKHLIFRTSWVYAGKGNN---FAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLY 213 (299)
T ss_dssp HHC----SSEEEEEECSEECSSSCC---HHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEE
T ss_pred HhC----CCeEEEeeeeecCCCcCc---HHHHHHHHHhcCCCEEeecCcccCCeeHHHHHHHHHHHHHHhccccccCceE
Confidence 432 389999999999997542 22222 23345543 22347899999999999999999876 2 36799
Q ss_pred EeeCCCCCCHHHHHHHHHHHhCCCCC-C------CccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHH
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLGRPSW-L------PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDAL 320 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l 320 (325)
|+++++++|+.|+++.+.+.+|.+.. + +.+... ... .........++++|+++ |||+|+ +++++|
T Consensus 214 ~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l 286 (299)
T 1n2s_A 214 HLVAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSA----YPT-PASRPGNSRLNTEKFQRNFDLILP--QWELGV 286 (299)
T ss_dssp ECCCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTT----SCC-SSCCCSBCCBCCHHHHHHHTCCCC--BHHHHH
T ss_pred EEeCCCCCCHHHHHHHHHHHhCCCcccccccccccccccc----ccC-cCCCCCceeeeHHHHHHhcCCCCC--CHHHHH
Confidence 99999999999999999999986521 1 111100 000 01112456778888875 899998 599999
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
++++
T Consensus 287 ~~~~ 290 (299)
T 1n2s_A 287 KRML 290 (299)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=271.78 Aligned_cols=298 Identities=14% Similarity=0.083 Sum_probs=218.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc--cCC--CCCccccCceeecCCchhHhhhCC--CCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFP--GKKTRFFPGVMIAEEPQWRDCIQG--STAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~--~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~ 93 (325)
.|+||||||+||||++++++|+++|++|++++|+++.... +.. ......+..+|+.|.+.+.+++++ +|+||||
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~ 82 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEKVQPDEVYNL 82 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 4799999999999999999999999999999998754321 000 000112456799999999888874 7999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCC-CCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVC 169 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~ 169 (325)
||... ......++...+++|+.++.+++++|.+ .++ +++||+||.++ ||.....+++|+.+.. ..| .+|..
T Consensus 83 A~~~~-~~~~~~~~~~~~~~Nv~g~~~l~~a~~~--~~~~~~iv~~SS~~v--yg~~~~~~~~e~~~~~~~~~Y~~sK~~ 157 (345)
T 2z1m_A 83 AAQSF-VGVSFEQPILTAEVDAIGVLRILEALRT--VKPDTKFYQASTSEM--FGKVQEIPQTEKTPFYPRSPYAVAKLF 157 (345)
T ss_dssp CCCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHH
T ss_pred CCCcc-hhhhhhCHHHHHHHHHHHHHHHHHHHHH--hCCCceEEEEechhh--cCCCCCCCCCccCCCCCCChhHHHHHH
Confidence 99642 1112345778899999999999999998 565 79999999998 9987777888877643 457 77888
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--cchHH-HH-HHHcCCC----CCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL--AKMIP-LF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--~~~~~-~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.|.....+..+.+++++++|+.++|||+.... ...+. .+ ....+.. .+++...++++|++|+|++++.++++
T Consensus 158 ~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~ 237 (345)
T 2z1m_A 158 GHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQ 237 (345)
T ss_dssp HHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhC
Confidence 88777777766789999999999999975321 11111 12 2233432 26677889999999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC---ccHHHHHHHhC-------c--cceeeccCcccChhHHH-HcC
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP---VPEFALKAVLG-------E--GAFVVLEGQRVVPARAK-ELG 308 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~---~~~~~~~~~~~-------~--~~~~~~~~~~~~~~k~~-~lg 308 (325)
+. .++||+++++++|+.|+++.+.+.+|.+..+. +|.+......+ . ..+.......++++|++ +||
T Consensus 238 ~~-~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~k~~~~lG 316 (345)
T 2z1m_A 238 PE-PDDYVIATGETHTVREFVEKAAKIAGFDIEWVGEGINEKGIDRNTGKVIVEVSEEFFRPAEVDILVGNPEKAMKKLG 316 (345)
T ss_dssp SS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHHHHHHHC
T ss_pred CC-CceEEEeCCCCccHHHHHHHHHHHhCCCccccccccccccccccccccccccCcccCCCCCcceeecCHHHHHHHcC
Confidence 65 58999999999999999999999999863221 22211100000 0 01111233456888886 599
Q ss_pred CCcccccHHHHHHHHh
Q 020476 309 FPFKYRYVKDALKAIM 324 (325)
Q Consensus 309 ~~p~~~~~~~~l~~~~ 324 (325)
|+|++ +++++|++++
T Consensus 317 ~~p~~-~~~~~l~~~~ 331 (345)
T 2z1m_A 317 WKPRT-TFDELVEIMM 331 (345)
T ss_dssp CCCCS-CHHHHHHHHH
T ss_pred CcccC-CHHHHHHHHH
Confidence 99998 5999999886
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-36 Score=262.62 Aligned_cols=288 Identities=17% Similarity=0.231 Sum_probs=198.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCc---ccccCCCC---CccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSK---AELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~---~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
|+||||||+||||++++++|+++|++|++++| ++.. ........ ....+..+|+.|.+.+.++++++|+|||+
T Consensus 2 k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~ 81 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIFHT 81 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEEEC
T ss_pred CEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEEEc
Confidence 68999999999999999999999999999998 5432 11110000 00114457999999999999999999999
Q ss_pred CCCCCCCCCChhh-HHHHHHHhhHHHHHHHHHHhcCCC-CCCCEEEEeeeeeeeecCC-CCceecCCCCC--------CC
Q 020476 94 AGTPIGTRWSSEI-KKEIKESRIRVTSKVVDLINESPE-GVRPSVLVSATALGYYGTS-ETEVFDESSPS--------GN 162 (325)
Q Consensus 94 a~~~~~~~~~~~~-~~~~~~~nv~~~~~ll~~~~~~~~-~~~~~v~~Ss~~v~~~g~~-~~~~~~e~~~~--------~~ 162 (325)
|+.. .....+ ...++++|+.++.+++++|++ . +++++||+||.++. |+.. ...+++|+++. .+
T Consensus 82 A~~~---~~~~~~~~~~~~~~nv~gt~~l~~aa~~--~~~~~~iV~~SS~~~~-~~~~~~~~~~~e~~~~~~~~~~~~~p 155 (322)
T 2p4h_X 82 ASPI---DFAVSEPEEIVTKRTVDGALGILKACVN--SKTVKRFIYTSSGSAV-SFNGKDKDVLDESDWSDVDLLRSVKP 155 (322)
T ss_dssp CCCC-----------CHHHHHHHHHHHHHHHHHTT--CSSCCEEEEEEEGGGT-SCSSSCCSEECTTCCCCHHHHHHHCC
T ss_pred CCcc---cCCCCChHHHHHHHHHHHHHHHHHHHHh--cCCccEEEEeccHHHc-ccCCCCCeecCCccccchhhhcccCc
Confidence 9743 222222 345889999999999999998 5 68899999998752 3322 23467776532 11
Q ss_pred ---ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 ---DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ---~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...|.....+....+++++++||+++||+.... ........ ....+.+..-+...++++|++|+|++++
T Consensus 156 ~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~a~~ 235 (322)
T 2p4h_X 156 FGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVHVDDVARAHI 235 (322)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEEHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEEHHHHHHHHH
Confidence 47 778777777666665579999999999999997432 11122111 2233333211113458999999999999
Q ss_pred HHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccH
Q 020476 237 EALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYV 316 (325)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~ 316 (325)
.+++++...|.|| ++++++|+.|+++.+.+.++.. ++|... ....... . ....++++|+++|||+|++ ++
T Consensus 236 ~~~~~~~~~g~~~-~~~~~~s~~e~~~~i~~~~~~~---~~~~~~---~~~~~~~-~-~~~~~d~~k~~~lG~~p~~-~~ 305 (322)
T 2p4h_X 236 YLLENSVPGGRYN-CSPFIVPIEEMSQLLSAKYPEY---QILTVD---ELKEIKG-A-RLPDLNTKKLVDAGFDFKY-TI 305 (322)
T ss_dssp HHHHSCCCCEEEE-CCCEEEEHHHHHHHHHHHCTTS---CCCCTT---TTTTCCC-E-ECCEECCHHHHHTTCCCCC-CH
T ss_pred HHhhCcCCCCCEE-EcCCCCCHHHHHHHHHHhCCCC---CCCCCc---cccCCCC-C-cceecccHHHHHhCCccCC-CH
Confidence 9998766567898 5667899999999999877421 122110 0011111 1 3467788999889999999 59
Q ss_pred HHHHHHHh
Q 020476 317 KDALKAIM 324 (325)
Q Consensus 317 ~~~l~~~~ 324 (325)
+++|++++
T Consensus 306 ~~~l~~~~ 313 (322)
T 2p4h_X 306 EDMFDDAI 313 (322)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999886
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-38 Score=268.72 Aligned_cols=267 Identities=14% Similarity=0.098 Sum_probs=204.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~ 96 (325)
..|+|||||||||||++++++|+++|++|++++|+. +|+.|.+.+.++++ ++|+|||||+.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~-----------------~Dl~d~~~~~~~~~~~~~d~vih~A~~ 73 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAH 73 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc-----------------CCCCCHHHHHHHHHhcCCCEEEECCcc
Confidence 356999999999999999999999999999999862 68889999999888 89999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWE 173 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~ 173 (325)
... .....++...+++|+.++.+++++|++ .++ ++||+||.++ |+.....+++|+++..+ .| .+|...|..
T Consensus 74 ~~~-~~~~~~~~~~~~~nv~~~~~l~~a~~~--~~~-~iv~~SS~~v--~~~~~~~~~~E~~~~~~~~~Y~~sK~~~E~~ 147 (292)
T 1vl0_A 74 TAV-DKCEEQYDLAYKINAIGPKNLAAAAYS--VGA-EIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEGENF 147 (292)
T ss_dssp CCH-HHHHHCHHHHHHHHTHHHHHHHHHHHH--HTC-EEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHHHHH
T ss_pred CCH-HHHhcCHHHHHHHHHHHHHHHHHHHHH--cCC-eEEEechHHe--ECCCCCCCCCCCCCCCCccHHHHHHHHHHHH
Confidence 421 112356778899999999999999998 566 9999999988 98777678888887543 56 667666655
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
...+ +.+++++||+.+||++. .+...+ ....+.++ ..++..++++|++|+|++++.+++++ .+++||+
T Consensus 148 ~~~~----~~~~~~lR~~~v~G~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~-~~~~~~i 218 (292)
T 1vl0_A 148 VKAL----NPKYYIVRTAWLYGDGN----NFVKTMINLGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEK-NYGTFHC 218 (292)
T ss_dssp HHHH----CSSEEEEEECSEESSSS----CHHHHHHHHHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHT-CCEEEEC
T ss_pred HHhh----CCCeEEEeeeeeeCCCc----ChHHHHHHHHhcCCcEEeecCeeeCCccHHHHHHHHHHHHhcC-CCcEEEe
Confidence 5443 34799999999999932 222222 22334443 22357789999999999999999886 6789999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHh
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~ 324 (325)
++++++|+.|+++.+.+.+|.+.. .++|..... . .........++++|+++ |||+|+ +++++|++++
T Consensus 219 ~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~----~-~~~~~~~~~~d~~k~~~~lG~~p~--~~~~~l~~~~ 287 (292)
T 1vl0_A 219 TCKGICSWYDFAVEIFRLTGIDVKVTPCTTEEFP----R-PAKRPKYSVLRNYMLELTTGDITR--EWKESLKEYI 287 (292)
T ss_dssp CCBSCEEHHHHHHHHHHHHCCCCEEEEECSTTSC----C-SSCCCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHH
T ss_pred cCCCCccHHHHHHHHHHHhCCCCceeeccccccC----c-ccCCCccccccHHHHHHHcCCCCC--CHHHHHHHHH
Confidence 999999999999999999997632 223322110 0 00112346678888875 899998 5999999886
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.9e-37 Score=266.18 Aligned_cols=291 Identities=21% Similarity=0.216 Sum_probs=200.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCC---CccccCceeecCCchhHhhhCCCCEEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~---~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
.++++||||||+||||++++++|+++|++|++++|+..... .+.... ....+..+|+.|.+.+.++++++|+||
T Consensus 3 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 3 SQSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 35679999999999999999999999999999999875321 110000 001134579999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCC-CCceecCCCCC---------
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS-ETEVFDESSPS--------- 160 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~-~~~~~~e~~~~--------- 160 (325)
|+|+... ....+....++++|+.++.+++++|++ .+ ++++||+||.++. |+.. ...+++|+.+.
T Consensus 83 h~A~~~~--~~~~~~~~~~~~~nv~gt~~ll~a~~~--~~~~~riV~~SS~~~~-~~~~~~~~~~~E~~~~~~~~~~~~~ 157 (337)
T 2c29_D 83 HVATPMD--FESKDPENEVIKPTIEGMLGIMKSCAA--AKTVRRLVFTSSAGTV-NIQEHQLPVYDESCWSDMEFCRAKK 157 (337)
T ss_dssp ECCCCCC--SSCSSHHHHTHHHHHHHHHHHHHHHHH--HSCCCEEEEECCGGGT-SCSSSCCSEECTTCCCCHHHHHHHC
T ss_pred EeccccC--CCCCChHHHHHHHHHHHHHHHHHHHHh--CCCccEEEEeeeHhhc-ccCCCCCcccCcccCCchhhhcccC
Confidence 9998641 122233456889999999999999988 55 7899999998742 5433 23456776532
Q ss_pred --CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH-HHHcCCCC-CCCcceeeeccHHHHHHH
Q 020476 161 --GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL-GSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 --~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~-~~~~~~~~-~~~~~~~~~v~v~D~a~a 234 (325)
...| .+|...|.+...+....+++++++||+++||++... ........ ....+.+. ........++|++|+|++
T Consensus 158 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~Dva~a 237 (337)
T 2c29_D 158 MTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLDDLCNA 237 (337)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHHHHHHH
Confidence 2247 778877777766655569999999999999997432 11111111 11223221 001123459999999999
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccc
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYR 314 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~ 314 (325)
++.+++++...+.|+++++ .+|+.|+++.+.+.++.. .+|.. .... ........++++|+++|||+|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~i~~~~~~~---~~~~~-----~~~~-~~~~~~~~~d~~k~~~lG~~p~~~ 307 (337)
T 2c29_D 238 HIYLFENPKAEGRYICSSH-DCIILDLAKMLREKYPEY---NIPTE-----FKGV-DENLKSVCFSSKKLTDLGFEFKYS 307 (337)
T ss_dssp HHHHHHCTTCCEEEEECCE-EEEHHHHHHHHHHHCTTS---CCCSC-----CTTC-CTTCCCCEECCHHHHHHTCCCCCC
T ss_pred HHHHhcCcccCceEEEeCC-CCCHHHHHHHHHHHCCCc---cCCCC-----CCcc-cCCCccccccHHHHHHcCCCcCCC
Confidence 9999988766678876554 589999999999987421 11110 0000 001234567888898899999994
Q ss_pred cHHHHHHHHh
Q 020476 315 YVKDALKAIM 324 (325)
Q Consensus 315 ~~~~~l~~~~ 324 (325)
++++|++++
T Consensus 308 -l~e~l~~~~ 316 (337)
T 2c29_D 308 -LEDMFTGAV 316 (337)
T ss_dssp -HHHHHHHHH
T ss_pred -HHHHHHHHH
Confidence 999999886
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-36 Score=262.44 Aligned_cols=281 Identities=13% Similarity=0.176 Sum_probs=208.7
Q ss_pred eEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~ 97 (325)
|||||||+||||++++++|+++ |++|++++|+..... .. .+..+|+.|.+.+.++++ ++|+|||+|+..
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~~---~~~~~D~~d~~~~~~~~~~~~~d~vih~a~~~ 73 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDTG----GI---KFITLDVSNRDEIDRAVEKYSIDAIFHLAGIL 73 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCCT----TC---CEEECCTTCHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCcccc----Cc---eEEEecCCCHHHHHHHHhhcCCcEEEECCccc
Confidence 5999999999999999999998 899999999765432 11 145679999999999887 899999999864
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC-CceecCCCCC--CCch-HHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPS--GNDY-LAEVCREWE 173 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~-~~~~~e~~~~--~~~y-~~k~~~~~~ 173 (325)
.. ....++...+++|+.++.+++++|++ .+++++||+||.++ |+... ..+.+|+.+. ...| .+|...|..
T Consensus 74 ~~--~~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~v~~SS~~~--~~~~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~ 147 (317)
T 3ajr_A 74 SA--KGEKDPALAYKVNMNGTYNILEAAKQ--HRVEKVVIPSTIGV--FGPETPKNKVPSITITRPRTMFGVTKIAAELL 147 (317)
T ss_dssp HH--HHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--CCTTSCSSSBCSSSCCCCCSHHHHHHHHHHHH
T ss_pred CC--ccccChHHHhhhhhHHHHHHHHHHHH--cCCCEEEEecCHHH--hCCCCCCCCccccccCCCCchHHHHHHHHHHH
Confidence 21 12345678899999999999999998 68889999999998 88643 3456666654 3467 778888877
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCC----cccchHHHH-HHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCCC-
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGG----ALAKMIPLF-MMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY- 244 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~----~~~~~~~~~-~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~~- 244 (325)
...+..+.+++++++||+.+||+... ....+...+ ....+++ .+++...++++|++|+|++++.+++++..
T Consensus 148 ~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~l~~~~~~ 227 (317)
T 3ajr_A 148 GQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKALVDLYEADRDK 227 (317)
T ss_dssp HHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHHHHHHHHCCGGG
T ss_pred HHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHHHHHHHhCCccc
Confidence 77666667999999999999997531 111223333 3333333 25677889999999999999999987642
Q ss_pred ---CceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHH
Q 020476 245 ---RGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL 320 (325)
Q Consensus 245 ---~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l 320 (325)
+++||+++ ..+|+.|+++.+.+.+|.......|... .. ... .....++++|++ +|||+|++ +++++|
T Consensus 228 ~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~~~i~~~~~~~-~~-~~~-----~~~~~~d~~k~~~~lG~~p~~-~~~~~l 298 (317)
T 3ajr_A 228 LVLRNGYNVTA-YTFTPSELYSKIKERIPEFEIEYKEDFR-DK-IAA-----TWPESLDSSEASNEWGFSIEY-DLDRTI 298 (317)
T ss_dssp CSSCSCEECCS-EEECHHHHHHHHHTTCCSCCEEECCCHH-HH-HHT-----TSCSCBCCHHHHHHHCCCCCC-CHHHHH
T ss_pred cccCceEecCC-ccccHHHHHHHHHHHCCccccccccccc-hh-hcc-----ccccccCHHHHHHHcCCCCCC-CHHHHH
Confidence 36999986 5799999999999999843211111110 10 000 113456788886 59999999 599999
Q ss_pred HHHh
Q 020476 321 KAIM 324 (325)
Q Consensus 321 ~~~~ 324 (325)
++++
T Consensus 299 ~~~~ 302 (317)
T 3ajr_A 299 DDMI 302 (317)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9886
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-36 Score=264.41 Aligned_cols=291 Identities=14% Similarity=0.098 Sum_probs=214.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC-------CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-CCCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-~~~d~ 89 (325)
..+|+||||||+||||++++++|+++| ++|++++|+........ .....+..+|+.|.+.+.+++ .++|+
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~~d~ 89 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGF--SGAVDARAADLSAPGEAEKLVEARPDV 89 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTC--CSEEEEEECCTTSTTHHHHHHHTCCSE
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccccc--CCceeEEEcCCCCHHHHHHHHhcCCCE
Confidence 345799999999999999999999999 89999999865432210 111113457899999999888 48999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-----CCCEEEEeeeeeeeecCCCCceecCCCCCC--C
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-----VRPSVLVSATALGYYGTSETEVFDESSPSG--N 162 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-----~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~ 162 (325)
|||+|+... ....+++...+++|+.++.+++++|++ .+ ++++||+||.++ |+.....+++|++++. .
T Consensus 90 vih~A~~~~--~~~~~~~~~~~~~nv~g~~~l~~~~~~--~~~~~~~~~~iv~~SS~~~--~~~~~~~~~~E~~~~~~~~ 163 (342)
T 2hrz_A 90 IFHLAAIVS--GEAELDFDKGYRINLDGTRYLFDAIRI--ANGKDGYKPRVVFTSSIAV--FGAPLPYPIPDEFHTTPLT 163 (342)
T ss_dssp EEECCCCCH--HHHHHCHHHHHHHHTHHHHHHHHHHHH--HHHHHCCCCEEEEEEEGGG--CCSSCCSSBCTTCCCCCSS
T ss_pred EEECCccCc--ccccccHHHHHHHHHHHHHHHHHHHHh--cccccCCCcEEEEeCchHh--hCCCCCCCcCCCCCCCCcc
Confidence 999999642 122345778899999999999999988 44 789999999988 8876556788888754 4
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEc-CCCC--cccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLG-KDGG--ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g-~~~~--~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...|.....+..+.+++++++|++.+|| |+.. ....++..+ ....+.+. ..+...++++|++|+|+
T Consensus 164 ~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~ 243 (342)
T 2hrz_A 164 SYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIRHWHASPRSAVG 243 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCEEEEECHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccceeeEehHHHHH
Confidence 57 7788888777777766789999999999998 5431 112233322 33445442 34466778999999999
Q ss_pred HHHHHHcCCC----CCceEEeeCCCCCCHHHHHHHHHHHhCCCC--CC-CccHHHHHHHhCccceeeccCcccChhHHHH
Q 020476 234 LIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS--WL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE 306 (325)
Q Consensus 234 a~~~~~~~~~----~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 306 (325)
+++.+++.+. .+++||++ ++++|+.|+++.+.+.+|.+. .+ ..|......... .....++++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~ni~-g~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~k~~~ 316 (342)
T 2hrz_A 244 FLIHGAMIDVEKVGPRRNLSMP-GLSATVGEQIEALRKVAGEKAVALIRREPNEMIMRMCE------GWAPGFEAKRARE 316 (342)
T ss_dssp HHHHHHHSCHHHHCSCCEEECC-CEEEEHHHHHHHHHHHHCHHHHTTEEECCCHHHHHHHT------TSCCCBCCHHHHH
T ss_pred HHHHHHhccccccCCccEEEcC-CCCCCHHHHHHHHHHHcCcccccceeeccCcchhhhhc------ccccccChHHHHH
Confidence 9999998763 35699996 567999999999999999653 11 112111111111 1123578888877
Q ss_pred cCCCcccccHHHHHHHHh
Q 020476 307 LGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 307 lg~~p~~~~~~~~l~~~~ 324 (325)
|||+|++ +++++|++++
T Consensus 317 lG~~p~~-~l~e~l~~~~ 333 (342)
T 2hrz_A 317 LGFTAES-SFEEIIQVHI 333 (342)
T ss_dssp TTCCCCS-SHHHHHHHHH
T ss_pred cCCCCCC-CHHHHHHHHH
Confidence 9999998 5999999886
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7.2e-37 Score=267.17 Aligned_cols=289 Identities=17% Similarity=0.166 Sum_probs=196.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-----CCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
++|+||||||+||||++|+++|+++|++|++++|+.+...... .......+..+|+.|.+.+.++++++|+|||+
T Consensus 8 ~~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vih~ 87 (338)
T 2rh8_A 8 GKKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAPIAGCDFVFHV 87 (338)
T ss_dssp -CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHHHTTCSEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHHHcCCCEEEEe
Confidence 3679999999999999999999999999999999765421100 00000113457889999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCC---CCceecCCCCC---------
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTS---ETEVFDESSPS--------- 160 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~---~~~~~~e~~~~--------- 160 (325)
|+.... ...+...+++++|+.++.+++++|++ .+ ++++||+||.++. |+.. ...+++|+++.
T Consensus 88 A~~~~~--~~~~~~~~~~~~nv~gt~~ll~aa~~--~~~v~r~V~~SS~~~~-~~~~~~~~~~~~~E~~~~~~~~~~~~~ 162 (338)
T 2rh8_A 88 ATPVHF--ASEDPENDMIKPAIQGVVNVMKACTR--AKSVKRVILTSSAAAV-TINQLDGTGLVVDEKNWTDIEFLTSAK 162 (338)
T ss_dssp SSCCCC-----------CHHHHHHHHHHHHHHHH--CTTCCEEEEECCHHHH-HHHHHTCSCCCCCTTTTTCC-------
T ss_pred CCccCC--CCCCcHHHHHHHHHHHHHHHHHHHHH--cCCcCEEEEEecHHHe-ecCCcCCCCcccChhhccchhhccccC
Confidence 986411 11222345889999999999999998 54 8899999998741 3321 11256666531
Q ss_pred --CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH-HHHcCCCC--CC------Ccceeeecc
Q 020476 161 --GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF-MMFAGGPL--GS------GQQWFSWIH 227 (325)
Q Consensus 161 --~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~-~~~~~~~~--~~------~~~~~~~v~ 227 (325)
...| .+|...|.+...+....+++++++||+++||++... .......+ ....+.+. +. +...++++|
T Consensus 163 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 242 (338)
T 2rh8_A 163 PPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSGSVSIAH 242 (338)
T ss_dssp CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHSSEEEEE
T ss_pred CccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccCcccEEE
Confidence 1147 778777777766655568999999999999997532 11111111 11222221 10 112348999
Q ss_pred HHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHc
Q 020476 228 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL 307 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l 307 (325)
++|+|++++.+++++...+.|+++++ .+|+.|+++.+.+.++... +|.. ...... .....++++|+++|
T Consensus 243 v~Dva~a~~~~~~~~~~~~~~~~~~~-~~s~~e~~~~l~~~~~~~~---~~~~-----~~~~~~--~~~~~~d~~k~~~l 311 (338)
T 2rh8_A 243 VEDVCRAHIFVAEKESASGRYICCAA-NTSVPELAKFLSKRYPQYK---VPTD-----FGDFPP--KSKLIISSEKLVKE 311 (338)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECSE-EECHHHHHHHHHHHCTTSC---CCCC-----CTTSCS--SCSCCCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCCcEEEecC-CCCHHHHHHHHHHhCCCCC---CCCC-----CCCCCc--CcceeechHHHHHh
Confidence 99999999999988766778988765 5899999999999876311 1110 000000 01267788899889
Q ss_pred CCCcccccHHHHHHHHh
Q 020476 308 GFPFKYRYVKDALKAIM 324 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~ 324 (325)
||+|++ +++|+|++++
T Consensus 312 G~~p~~-~l~~gl~~~~ 327 (338)
T 2rh8_A 312 GFSFKY-GIEEIYDESV 327 (338)
T ss_dssp TCCCSC-CHHHHHHHHH
T ss_pred CCCCCC-CHHHHHHHHH
Confidence 999999 6999999886
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-36 Score=285.10 Aligned_cols=297 Identities=17% Similarity=0.232 Sum_probs=218.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCch-hHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~-~~~~~~~~d~vi~~a~~ 96 (325)
++|+|||||||||||++++++|+++ |++|++++|+............ ..+..+|+.|.+. +.++++++|+|||+|+.
T Consensus 314 ~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~-v~~v~~Dl~d~~~~~~~~~~~~D~Vih~Aa~ 392 (660)
T 1z7e_A 314 RRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAI 392 (660)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTT-EEEEECCTTTCHHHHHHHHHHCSEEEECCCC
T ss_pred cCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCc-eEEEECCCCCcHHHHHHhhcCCCEEEECcee
Confidence 4579999999999999999999998 8999999998765433322111 1134568888765 77788899999999996
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---------CCch-HH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---------GNDY-LA 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---------~~~y-~~ 166 (325)
.... ....++...+++|+.++.+++++|++ .+ +++||+||.++ ||.....+++|+++. ...| .+
T Consensus 393 ~~~~-~~~~~~~~~~~~Nv~gt~~ll~aa~~--~~-~r~V~~SS~~v--yg~~~~~~~~E~~~~~~~~p~~~p~~~Y~~s 466 (660)
T 1z7e_A 393 ATPI-EYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVS 466 (660)
T ss_dssp CCTH-HHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCSSSBCTTTCCEEECCTTCTTHHHHHH
T ss_pred cCcc-ccccCHHHHHHhhhHHHHHHHHHHHH--hC-CEEEEEecHHH--cCCCCCcccCCCccccccCcccCCCCCcHHH
Confidence 5221 12345678899999999999999998 56 89999999988 987777778887742 1247 67
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc-------cchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHH
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL-------AKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~-------~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a 234 (325)
|...|.....+..+.+++++++||+++||++.... ..++..+ ....+.++ +++.+.++++|++|+|++
T Consensus 467 K~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a 546 (660)
T 1z7e_A 467 KQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEA 546 (660)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCCEEECEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCeEEEEEEHHHHHHH
Confidence 88888777766666699999999999999975321 1223222 34456554 567789999999999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC-CCCHHHHHHHHHHHhCCCC-CCCccHHH------HHHHhCccceeeccCcccChhH
Q 020476 235 IYEALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPS-WLPVPEFA------LKAVLGEGAFVVLEGQRVVPAR 303 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~-~~s~~e~~~~i~~~~g~~~-~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~k 303 (325)
++.+++++. .+++||+++++ ++|+.|+++.+.+.+|.+. .+..|.+. .....+.. ........++++|
T Consensus 547 i~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~k 625 (660)
T 1z7e_A 547 LYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKG-YQDVEHRKPSIRN 625 (660)
T ss_dssp HHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCTTGGGSCCCCCEEEECTHHHHCTT-CCCCSCCCBCCHH
T ss_pred HHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCCcccccCccccccchhcccccccc-ccchhhcccCHHH
Confidence 999998764 45699999986 8999999999999998652 22222210 01111110 0112346678888
Q ss_pred HH-HcCCCcccccHHHHHHHHh
Q 020476 304 AK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 304 ~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
++ +|||+|++ +++++|++++
T Consensus 626 a~~~LG~~p~~-~l~egl~~~i 646 (660)
T 1z7e_A 626 AHRCLDWEPKI-DMQETIDETL 646 (660)
T ss_dssp HHHHHCCCCCC-CHHHHHHHHH
T ss_pred HHHhcCCCccC-cHHHHHHHHH
Confidence 86 49999998 5999999886
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-35 Score=256.65 Aligned_cols=287 Identities=17% Similarity=0.093 Sum_probs=204.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccC-ceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFP-GVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~-~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+|+||||||+||||++++++|+++|++|++++|+..+...+... .....+. .+|+.|.+.+.++++++|+|||
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih 89 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAH 89 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEEE
Confidence 347999999999999999999999999999999976543211100 0001133 5799999999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC----CceecCCCC---------
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSP--------- 159 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~----~~~~~e~~~--------- 159 (325)
+|+..... .++...+++|+.++.+++++|.+. .+++++||+||.++ |+... +.+++|+++
T Consensus 90 ~A~~~~~~----~~~~~~~~~n~~g~~~ll~~~~~~-~~~~~iv~~SS~~~--~~~~~~~~~~~~~~E~~~~~~~~~~~~ 162 (342)
T 1y1p_A 90 IASVVSFS----NKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVS--ALIPKPNVEGIYLDEKSWNLESIDKAK 162 (342)
T ss_dssp CCCCCSCC----SCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGG--TCCCCTTCCCCEECTTCCCHHHHHHHH
T ss_pred eCCCCCCC----CCHHHHHHHHHHHHHHHHHHHHhC-CCCcEEEEeccHHH--hcCCCCCCCCcccCccccCchhhhhhc
Confidence 99965321 346678999999999999999841 46789999999988 65332 257788763
Q ss_pred ---------CCCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCccc--chHHH-H-HHHcCCCC---CCCc
Q 020476 160 ---------SGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALA--KMIPL-F-MMFAGGPL---GSGQ 220 (325)
Q Consensus 160 ---------~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~--~~~~~-~-~~~~~~~~---~~~~ 220 (325)
+...| .+|...|.....+..+. +++++++||+++||+...... ..... + ....+.+. +++
T Consensus 163 ~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 241 (342)
T 1y1p_A 163 TLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALM- 241 (342)
T ss_dssp HSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTC-
T ss_pred cccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCccccccC-
Confidence 12346 77877777776665543 789999999999999753321 12222 2 34445543 333
Q ss_pred ceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccC
Q 020476 221 QWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVV 300 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (325)
..++++|++|+|++++.+++++...|.+++..+.++|+.|+++.+.+.+|.+. ++.+. ... ......++
T Consensus 242 ~~~~~v~v~Dva~a~~~~~~~~~~~g~~~~~~g~~~s~~e~~~~i~~~~~~~~-~~~~~------~~~----~~~~~~~d 310 (342)
T 1y1p_A 242 PPQYYVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKT-FPADF------PDQ----GQDLSKFD 310 (342)
T ss_dssp CSEEEEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSC-CCCCC------CCC----CCCCCEEC
T ss_pred CcCCEeEHHHHHHHHHHHHcCcccCCceEEEeCCCCCHHHHHHHHHHHCCCcc-CCCCC------Ccc----ccccccCC
Confidence 57899999999999999998765455444566678999999999999998752 22110 000 11235667
Q ss_pred hhHHHH-cCC---CcccccHHHHHHHHhC
Q 020476 301 PARAKE-LGF---PFKYRYVKDALKAIMS 325 (325)
Q Consensus 301 ~~k~~~-lg~---~p~~~~~~~~l~~~~~ 325 (325)
++|+++ ||| .+.. +++++|+++++
T Consensus 311 ~~k~~~~lg~~~~~~~~-~l~~~l~~~~~ 338 (342)
T 1y1p_A 311 TAPSLEILKSLGRPGWR-SIEESIKDLVG 338 (342)
T ss_dssp CHHHHHHHHHTTCCSCC-CHHHHHHHHHC
T ss_pred hHHHHHHHhhcccCCcC-CHHHHHHHHHH
Confidence 888864 777 4444 69999999874
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-35 Score=277.72 Aligned_cols=292 Identities=21% Similarity=0.224 Sum_probs=210.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc----cCC-CCCccccCceeecCCchhHhhhC--CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFP-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~-~~~~~~~~~~d~~d~~~~~~~~~--~~d~v 90 (325)
.++|+||||||+||||++|+++|+++|++|++++|+...... +.. ......+..+|+.|.+.+.++++ ++|+|
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~~D~V 88 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSV 88 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhccCCceEEEEcCCCCHHHHHHHHHhCCCCEE
Confidence 345799999999999999999999999999999997653211 000 00001144679999999999887 89999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC----CceecCCCCCC--Cch
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE----TEVFDESSPSG--NDY 164 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~----~~~~~e~~~~~--~~y 164 (325)
||+|+..... .....+.+.+++|+.++.+++++|++ .+++++|++||.++ ||... ..+++|+.+.. ..|
T Consensus 89 ih~A~~~~~~-~~~~~~~~~~~~Nv~gt~~ll~a~~~--~~~~~iV~~SS~~v--yg~~~~~~~~~~~~E~~~~~p~~~Y 163 (699)
T 1z45_A 89 IHFAGLKAVG-ESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPTNPY 163 (699)
T ss_dssp EECCSCCCHH-HHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred EECCcccCcC-ccccCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECcHHH--hCCCccccccCCccccCCCCCCChH
Confidence 9999964211 11234567889999999999999998 67899999999988 87543 24567776543 457
Q ss_pred -HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCCc---------ccchHHHH-HHHcC--CCC---C------CCc
Q 020476 165 -LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---G------SGQ 220 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~~---------~~~~~~~~-~~~~~--~~~---~------~~~ 220 (325)
.+|...|.....+..+ .+++++++||+.+||+.... ...+++.+ ....+ .++ + ++.
T Consensus 164 ~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 243 (699)
T 1z45_A 164 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 243 (699)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred HHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCC
Confidence 7787777776665554 68999999999999985311 12344443 33222 232 3 577
Q ss_pred ceeeeccHHHHHHHHHHHHcCC------C-CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceee
Q 020476 221 QWFSWIHLDDIVNLIYEALSNP------S-YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVV 293 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~~------~-~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (325)
+.++++|++|+|++++.+++.. . ..++||+++++++|+.|+++.+++.+|.+..+.... ...++
T Consensus 244 ~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~~~~~~----~~~~~----- 314 (699)
T 1z45_A 244 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTG----RRAGD----- 314 (699)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------------------
T ss_pred eeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCCceecC----CCCCc-----
Confidence 8899999999999999998642 1 346999999999999999999999999864322111 11111
Q ss_pred ccCcccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 294 LEGQRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 294 ~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
.....++++|++ +|||+|++ +++++|++++
T Consensus 315 ~~~~~~d~~ka~~~LG~~p~~-~l~egl~~~~ 345 (699)
T 1z45_A 315 VLNLTAKPDRAKRELKWQTEL-QVEDSCKDLW 345 (699)
T ss_dssp CCCCCBCCHHHHHHTCCCCCC-CHHHHHHHHH
T ss_pred cccccCCHHHHHHhcCCCCCC-CHHHHHHHHH
Confidence 234567778885 59999999 5999999886
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.5e-34 Score=233.77 Aligned_cols=220 Identities=13% Similarity=0.091 Sum_probs=164.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
||+|||||||||||++++++|+++|++|++++|++++........ .+..+|+.|.+.+.++++++|+|||+|+...
T Consensus 4 m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~- 79 (227)
T 3dhn_A 4 VKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIENEHL---KVKKADVSSLDEVCEVCKGADAVISAFNPGW- 79 (227)
T ss_dssp CCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCCTTE---EEECCCTTCHHHHHHHHTTCSEEEECCCC---
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhccCce---EEEEecCCCHHHHHHHhcCCCEEEEeCcCCC-
Confidence 579999999999999999999999999999999877654432221 2556899999999999999999999998531
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC--CCCch-HHHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP--SGNDY-LAEVCREWEGTA 176 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~--~~~~y-~~k~~~~~~~~~ 176 (325)
.....+++|+.++.++++++++ .+++++||+||.++ |+...+.+ .++.+ +...| .+|...|.....
T Consensus 80 ------~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~-~~~~~~~p~~~Y~~sK~~~e~~~~~ 148 (227)
T 3dhn_A 80 ------NNPDIYDETIKVYLTIIDGVKK--AGVNRFLMVGGAGS--LFIAPGLR-LMDSGEVPENILPGVKALGEFYLNF 148 (227)
T ss_dssp ----------CCSHHHHHHHHHHHHHHH--TTCSEEEEECCSTT--SEEETTEE-GGGTTCSCGGGHHHHHHHHHHHHHT
T ss_pred ------CChhHHHHHHHHHHHHHHHHHH--hCCCEEEEeCChhh--ccCCCCCc-cccCCcchHHHHHHHHHHHHHHHHH
Confidence 1123678899999999999999 78889999999987 44333332 23333 34456 678777766677
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNP 255 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~ 255 (325)
+..+.+++++++||+.+||++..... + ......++..+.. ++++|++|+|++++.+++++. .+++|+++++++
T Consensus 149 ~~~~~~~~~~ilrp~~v~g~~~~~~~-~----~~~~~~~~~~~~~-~~~i~~~Dva~ai~~~l~~~~~~g~~~~~~~~~~ 222 (227)
T 3dhn_A 149 LMKEKEIDWVFFSPAADMRPGVRTGR-Y----RLGKDDMIVDIVG-NSHISVEDYAAAMIDELEHPKHHQERFTIGYLEH 222 (227)
T ss_dssp GGGCCSSEEEEEECCSEEESCCCCCC-C----EEESSBCCCCTTS-CCEEEHHHHHHHHHHHHHSCCCCSEEEEEECCSC
T ss_pred HhhccCccEEEEeCCcccCCCccccc-e----eecCCCcccCCCC-CcEEeHHHHHHHHHHHHhCccccCcEEEEEeehh
Confidence 77677999999999999999753221 1 0111222222332 899999999999999999988 455999999999
Q ss_pred CCHHH
Q 020476 256 VRLAE 260 (325)
Q Consensus 256 ~s~~e 260 (325)
.+|.+
T Consensus 223 ~~~~~ 227 (227)
T 3dhn_A 223 HHHHH 227 (227)
T ss_dssp CC---
T ss_pred cccCC
Confidence 98863
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-34 Score=241.84 Aligned_cols=262 Identities=15% Similarity=0.126 Sum_probs=191.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC--CCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG--STAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~vi~~a~~~~ 98 (325)
|+|+||||+||||++++++|++ |++|++++|++... . ...+|+.|++.+.+++++ +|+||||||...
T Consensus 1 m~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~~----~------~~~~Dl~~~~~~~~~~~~~~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEIQ----G------GYKLDLTDFPRLEDFIIKKRPDVIINAAAMTD 69 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCCT----T------CEECCTTSHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CEEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcCC----C------CceeccCCHHHHHHHHHhcCCCEEEECCcccC
Confidence 5899999999999999999995 89999999987421 1 145789999999988875 999999999642
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
. ....+++...+++|+.++.++++++++ .+. ++||+||.++ |+.... +++|++++.+ .| .+|...|....
T Consensus 70 ~-~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~-~iv~~SS~~~--~~~~~~-~~~e~~~~~~~~~Y~~sK~~~e~~~~ 142 (273)
T 2ggs_A 70 V-DKCEIEKEKAYKINAEAVRHIVRAGKV--IDS-YIVHISTDYV--FDGEKG-NYKEEDIPNPINYYGLSKLLGETFAL 142 (273)
T ss_dssp H-HHHHHCHHHHHHHHTHHHHHHHHHHHH--TTC-EEEEEEEGGG--SCSSSC-SBCTTSCCCCSSHHHHHHHHHHHHHC
T ss_pred h-hhhhhCHHHHHHHhHHHHHHHHHHHHH--hCC-eEEEEeccee--EcCCCC-CcCCCCCCCCCCHHHHHHHHHHHHHh
Confidence 1 112346778899999999999999998 565 8999999998 875543 6788776543 45 55554444332
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTA 252 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~ 252 (325)
. ++++++||+.+||+. .+...+ ....+.++ ..+. .+++++++|+|++++.+++++. .|+||+++
T Consensus 143 ~------~~~~~iR~~~v~G~~-----~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~dva~~i~~~~~~~~-~g~~~i~~ 209 (273)
T 2ggs_A 143 Q------DDSLIIRTSGIFRNK-----GFPIYVYKTLKEGKTVFAFKG-YYSPISARKLASAILELLELRK-TGIIHVAG 209 (273)
T ss_dssp C------TTCEEEEECCCBSSS-----SHHHHHHHHHHTTCCEEEESC-EECCCBHHHHHHHHHHHHHHTC-CEEEECCC
T ss_pred C------CCeEEEecccccccc-----HHHHHHHHHHHcCCCEEeecC-CCCceEHHHHHHHHHHHHhcCc-CCeEEECC
Confidence 1 678999999999832 122222 22334443 1122 7899999999999999998764 67999999
Q ss_pred CCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCc-ccccHHHHH
Q 020476 253 PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPF-KYRYVKDAL 320 (325)
Q Consensus 253 ~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p-~~~~~~~~l 320 (325)
+++|+.|+++.+.+.+|.+..+..+.+.. ...........++++|+++ |||+| .+ +++++|
T Consensus 210 -~~~s~~e~~~~~~~~~g~~~~~~~~~~~~-----~~~~~~~~~~~~d~~k~~~~lG~~p~~~-~l~~~~ 272 (273)
T 2ggs_A 210 -ERISRFELALKIKEKFNLPGEVKEVDEVR-----GWIAKRPYDSSLDSSRARKILSTDFYTL-DLDGMV 272 (273)
T ss_dssp -CCEEHHHHHHHHHHHTTCCSCEEEESSCT-----TCCSCCCSBCCBCCHHHHHHCSSCCCSC-CGGGCC
T ss_pred -CcccHHHHHHHHHHHhCCChhhccccccc-----ccccCCCcccccCHHHHHHHhCCCCCCc-cccccc
Confidence 89999999999999999874432221110 0111123456788899975 99999 56 588764
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-33 Score=250.54 Aligned_cols=293 Identities=12% Similarity=0.077 Sum_probs=199.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc---cCC-------------CCCccccCceeecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---IFP-------------GKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~-------------~~~~~~~~~~d~~d~~~~~~~ 83 (325)
+|+|||||||||||++++++|++.|++|++++|++..... +.. ......+..+|+.|++.+. .
T Consensus 69 ~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 147 (427)
T 4f6c_A 69 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 147 (427)
T ss_dssp CEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC-C
T ss_pred CCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC-C
Confidence 4689999999999999999999999999999999872110 000 0000114467888888887 7
Q ss_pred hCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeee--cCCCCceecCCCC--
Q 020476 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY--GTSETEVFDESSP-- 159 (325)
Q Consensus 84 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~--g~~~~~~~~e~~~-- 159 (325)
+.++|+|||||+... ...++...+++|+.++.+++++|++ +++++||+||.+++.+ +.....+++|+++
T Consensus 148 ~~~~d~Vih~A~~~~----~~~~~~~~~~~Nv~g~~~l~~aa~~---~~~~~v~~SS~~~G~~~~~~~~~~~~~E~~~~~ 220 (427)
T 4f6c_A 148 PENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFSEADVYK 220 (427)
T ss_dssp SSCCSEEEECCCCC-----------CHHHHHHHHHHHHHHHHHH---TTCEEEEEEEGGGGSEECSSCSCCEECTTCSCS
T ss_pred cCCCCEEEECCcccC----CCCCHHHHHHHHHHHHHHHHHHHHh---cCCcEEEECchHhCCCccCCCCCcccccccccc
Confidence 789999999999652 2345678889999999999999998 5689999999887222 1234567888877
Q ss_pred ---CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc------cc-hHHHH-HHHcCCCC--CCCcceeee
Q 020476 160 ---SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AK-MIPLF-MMFAGGPL--GSGQQWFSW 225 (325)
Q Consensus 160 ---~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~------~~-~~~~~-~~~~~~~~--~~~~~~~~~ 225 (325)
+...| .+|...|.....+.+ .|++++++||++|||+..... .. +...+ ....+.++ +.++..+++
T Consensus 221 ~~~~~~~Y~~sK~~~E~~~~~~~~-~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (427)
T 4f6c_A 221 GQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDF 299 (427)
T ss_dssp SCCCCSHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTCEECC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHH-cCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccceEEE
Confidence 45567 778877777766544 599999999999999975432 11 22222 33344444 335788999
Q ss_pred ccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccce--------eeccCc
Q 020476 226 IHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF--------VVLEGQ 297 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~~~~ 297 (325)
++++|+|++++.++..+..+++||+++++++++.|+++.+++ +| -..++.+.+..........+ ......
T Consensus 300 v~v~DvA~ai~~~~~~~~~g~~~~l~~~~~~s~~el~~~i~~-~g-~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 377 (427)
T 4f6c_A 300 SFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKR-KE-IELVSDESFNEILQKQDMYETIGLTSVDREQQLA 377 (427)
T ss_dssp EEHHHHHHHHHHHTTSCCCCSEEEESCSCCEEHHHHHHHHHS-SC-CEEECHHHHHHHHHHTTCHHHHHHHHHHHTSEEC
T ss_pred eeHHHHHHHHHHHHcCCCCCCEEEecCCCCCcHHHHHHHHHH-cC-CcccCHHHHHHHHHhcCchhhhhhhhccccCCce
Confidence 999999999999998877667999999999999999999998 66 32334444432221100000 001123
Q ss_pred ccCh----hHHHHcCCCcccccHHHHHHHHh
Q 020476 298 RVVP----ARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 298 ~~~~----~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
.+++ ++++++||.+... -++.+++++
T Consensus 378 ~~d~~~~~~~l~~~G~~~~~~-~~~~l~~~~ 407 (427)
T 4f6c_A 378 MIDTTLTLKIMNHISEKWPTI-TNNWLYHWA 407 (427)
T ss_dssp EECCHHHHHHHHHTTCCCCCC-CHHHHHHHH
T ss_pred eccHHHHHHHHHhcCCCCCCC-CHHHHHHHH
Confidence 3333 3346789987742 355666654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-33 Score=236.42 Aligned_cols=265 Identities=15% Similarity=0.154 Sum_probs=190.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~ 98 (325)
|+|||||||||||++++++|+++ |++|++++|++.+...+.... ..+..+|+.|++.+.++++++|+|||+|+..
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~- 77 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLADQG--VEVRHGDYNQPESLQKAFAGVSKLLFISGPH- 77 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHHTT--CEEEECCTTCHHHHHHHTTTCSEEEECCCCC-
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhhcC--CeEEEeccCCHHHHHHHHhcCCEEEEcCCCC-
Confidence 58999999999999999999998 999999999876543221110 1144679999999999999999999999852
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~ 177 (325)
... ++|+.++.+++++|++ .+++++||+||.++ |+. ...| .+|...|....
T Consensus 78 ---~~~-------~~n~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~~------------~~~y~~~K~~~E~~~~-- 129 (287)
T 2jl1_A 78 ---YDN-------TLLIVQHANVVKAARD--AGVKHIAYTGYAFA--EES------------IIPLAHVHLATEYAIR-- 129 (287)
T ss_dssp ---SCH-------HHHHHHHHHHHHHHHH--TTCSEEEEEEETTG--GGC------------CSTHHHHHHHHHHHHH--
T ss_pred ---cCc-------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CCC------------CCchHHHHHHHHHHHH--
Confidence 111 5789999999999999 78899999999877 521 1246 56655554432
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC-CCCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCC
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP-LGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNP 255 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~ 255 (325)
..+++++++||+.++|+... ..+..... .+.. ...++..++++|++|+|++++.+++++. .+++||++++++
T Consensus 130 --~~~~~~~ilrp~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~ 203 (287)
T 2jl1_A 130 --TTNIPYTFLRNALYTDFFVN--EGLRASTE--SGAIVTNAGSGIVNSVTRNELALAAATVLTEEGHENKTYNLVSNQP 203 (287)
T ss_dssp --HTTCCEEEEEECCBHHHHSS--GGGHHHHH--HTEEEESCTTCCBCCBCHHHHHHHHHHHHTSSSCTTEEEEECCSSC
T ss_pred --HcCCCeEEEECCEeccccch--hhHHHHhh--CCceeccCCCCccCccCHHHHHHHHHHHhcCCCCCCcEEEecCCCc
Confidence 36899999999988876411 11111111 2222 3456678899999999999999998865 345999999999
Q ss_pred CCHHHHHHHHHHHhCCCCC-CCccHHHHHHHh---Cccce-----------eeccCcccChhHHHH-cCCCcccccHHHH
Q 020476 256 VRLAEMCDHLGNVLGRPSW-LPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDA 319 (325)
Q Consensus 256 ~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~k~~~-lg~~p~~~~~~~~ 319 (325)
+|+.|+++.+.+.+|++.. .+.|........ +.... ........+++|+++ +| |.+ +++|+
T Consensus 204 ~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG--~~~-~l~e~ 280 (287)
T 2jl1_A 204 WTFDELAQILSEVSGKKVVHQPVSFEEEKNFLVNAGVPEPFTEITAAIYDAISKGEASKTSDDLQKLIG--SLT-PLKET 280 (287)
T ss_dssp BCHHHHHHHHHHHHSSCCEEEECCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHS--SCC-CHHHH
T ss_pred CCHHHHHHHHHHHHCCcceEEeCCHHHHHHHHHhCCCCHHHHHHHHHHHHHHhCCCCcCCchHHHHHhC--CCC-CHHHH
Confidence 9999999999999998743 355544333211 11110 001234556777765 89 555 69999
Q ss_pred HHHHhC
Q 020476 320 LKAIMS 325 (325)
Q Consensus 320 l~~~~~ 325 (325)
|+++++
T Consensus 281 l~~~~~ 286 (287)
T 2jl1_A 281 VKQALK 286 (287)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999874
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-33 Score=255.63 Aligned_cols=290 Identities=12% Similarity=0.081 Sum_probs=202.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-------------------cCCCCCccccCceeecCCchh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------------------IFPGKKTRFFPGVMIAEEPQW 80 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~~~d~~d~~~~ 80 (325)
+|+|||||||||||++|+++|++.|++|++++|+...... .... ..+..+|+.+++.+
T Consensus 150 ~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~---v~~v~~Dl~d~~~l 226 (508)
T 4f6l_B 150 LGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSN---IEVIVGDFECMDDV 226 (508)
T ss_dssp CEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTT---EEEEEEBTTBCSSC
T ss_pred CCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCc---eEEEecCCcccccC
Confidence 5799999999999999999999999999999998873210 0111 11445788888888
Q ss_pred HhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC--CCCceecCCC
Q 020476 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT--SETEVFDESS 158 (325)
Q Consensus 81 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~--~~~~~~~e~~ 158 (325)
. +..++|+|||||+... ...++..++++|+.++.+++++|++ +.+++||+||.+++.|.. ....+++|++
T Consensus 227 ~-~~~~~D~Vih~Aa~~~----~~~~~~~~~~~Nv~gt~~ll~~a~~---~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~ 298 (508)
T 4f6l_B 227 V-LPENMDTIIHAGARTD----HFGDDDEFEKVNVQGTVDVIRLAQQ---HHARLIYVSTISVGTYFDIDTEDVTFSEAD 298 (508)
T ss_dssp C-CSSCCSEEEECCCC------------CCHHHHHHHHHHHHHHHHT---TTCEEEEEEESCTTSEECTTCSCCEECTTC
T ss_pred C-CccCCCEEEECCceec----CCCCHHHHhhhHHHHHHHHHHHHHh---CCCcEEEeCChhhccCCccCCcCccccccc
Confidence 7 7789999999999642 2335667888999999999999998 568999999998732322 3456788887
Q ss_pred C-----CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc------cc-hHHHH-HHHcCCCC--CCCcce
Q 020476 159 P-----SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL------AK-MIPLF-MMFAGGPL--GSGQQW 222 (325)
Q Consensus 159 ~-----~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~------~~-~~~~~-~~~~~~~~--~~~~~~ 222 (325)
+ +...| .+|...|.....+.. .|++++|+||+.|||+..... .. +...+ .......+ +.++..
T Consensus 299 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~-~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~ 377 (508)
T 4f6l_B 299 VYKGQLLTSPYTRSKFYSELKVLEAVN-NGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMP 377 (508)
T ss_dssp SCSSBCCCSHHHHHHHHHHHHHHHHHH-TTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSE
T ss_pred ccccccCCCcHHHHHHHHHHHHHHHHH-cCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCce
Confidence 6 44567 788888877776654 699999999999999975432 11 22333 23333333 446889
Q ss_pred eeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccce--------eec
Q 020476 223 FSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF--------VVL 294 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~~ 294 (325)
+++++++|+|++++.++.++..+++||+++++++|+.|+++.+++.. -..++.+.|..........+ ...
T Consensus 378 ~~~v~v~DvA~ai~~~~~~~~~~~~~nl~~~~~~s~~el~~~i~~~~--~~~~~~~~w~~~l~~~~~~~~~~~~~~~~~~ 455 (508)
T 4f6l_B 378 VDFSFVDTTARQIVALAQVNTPQIIYHVLSPNKMPVKSLLECVKRKE--IELVSDESFNEILQKQDMYETIGLTSVDREQ 455 (508)
T ss_dssp EECEEHHHHHHHHHHHTTBCCSCSEEEESCSCEEEHHHHHHHHHSSC--CEEECHHHHHHHHHTTCCHHHHHHHHTGGGS
T ss_pred EEEEcHHHHHHHHHHHHhCCCCCCEEEeCCCCCCCHHHHHHHHHHcC--CcccCHHHHHHHHHhcCCccchhcccccccC
Confidence 99999999999999999887767799999999999999999999865 32334444433221100000 001
Q ss_pred cCcccCh----hHHHHcCCCcccccHHHHHHHHh
Q 020476 295 EGQRVVP----ARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 295 ~~~~~~~----~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
....+++ ++++++||.+... -++.+++++
T Consensus 456 ~~~~~d~~~~~~~l~~~G~~~~~~-~~~~l~~~~ 488 (508)
T 4f6l_B 456 QLAMIDTTLTLKIMNHISEKWPTI-TNNWLYHWA 488 (508)
T ss_dssp EECEECCHHHHHHHHHHSCCCCCC-CHHHHHHHH
T ss_pred cceecchHHHHHHHHHcCCCCCCC-CHHHHHHHH
Confidence 1223333 3356789987752 466666654
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-32 Score=230.70 Aligned_cols=265 Identities=15% Similarity=0.143 Sum_probs=185.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
||||||||||+||+++++.|++. |++|++++|++++...+.... ..+..+|+.|++.+.++++++|+|||+|+....
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~~~~--v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~ 78 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDWRGK--VSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHP 78 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGGBTT--BEEEECCTTCHHHHHHHTTTCSEEEECCCCCCS
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhhhCC--CEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCcc
Confidence 68999999999999999999998 999999999887654432211 124568999999999999999999999986411
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHHHhh
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKV 179 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~~~~ 179 (325)
...|+.++.+++++|++ .+++++||+||.+. .. ..+. . ..+.....+ ....
T Consensus 79 -----------~~~~~~~~~~l~~aa~~--~gv~~iv~~Ss~~~-----~~------~~~~-~--~~~~~~~~e--~~~~ 129 (289)
T 3e48_A 79 -----------SFKRIPEVENLVYAAKQ--SGVAHIIFIGYYAD-----QH------NNPF-H--MSPYFGYAS--RLLS 129 (289)
T ss_dssp -----------HHHHHHHHHHHHHHHHH--TTCCEEEEEEESCC-----ST------TCCS-T--THHHHHHHH--HHHH
T ss_pred -----------chhhHHHHHHHHHHHHH--cCCCEEEEEcccCC-----CC------CCCC-c--cchhHHHHH--HHHH
Confidence 12478999999999999 78899999999543 11 1111 1 122111111 1222
Q ss_pred cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCCCCCH
Q 020476 180 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRL 258 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~~~s~ 258 (325)
..+++++++||++++|+.. .++...........+.++..+++++++|+|++++.++.++.. +++||++ ++.+|+
T Consensus 130 ~~g~~~~ilrp~~~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~-~~~~s~ 204 (289)
T 3e48_A 130 TSGIDYTYVRMAMYMDPLK----PYLPELMNMHKLIYPAGDGRINYITRNDIARGVIAIIKNPDTWGKRYLLS-GYSYDM 204 (289)
T ss_dssp HHCCEEEEEEECEESTTHH----HHHHHHHHHTEECCCCTTCEEEEECHHHHHHHHHHHHHCGGGTTCEEEEC-CEEEEH
T ss_pred HcCCCEEEEeccccccccH----HHHHHHHHCCCEecCCCCceeeeEEHHHHHHHHHHHHcCCCcCCceEEeC-CCcCCH
Confidence 3589999999999998731 122222111111235678889999999999999999998764 5599999 999999
Q ss_pred HHHHHHHHHHhCCCC-CCCccHHHHHHHhCc-c--ce--------eeccCcccChhHH-HHcCCCcccccHHHHHHHH
Q 020476 259 AEMCDHLGNVLGRPS-WLPVPEFALKAVLGE-G--AF--------VVLEGQRVVPARA-KELGFPFKYRYVKDALKAI 323 (325)
Q Consensus 259 ~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~-~--~~--------~~~~~~~~~~~k~-~~lg~~p~~~~~~~~l~~~ 323 (325)
.|+++.+.+.+|++. ..+++.......... . .. ............. +.+|++|+ +++|++++-
T Consensus 205 ~e~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~G~~p~--~~~~~~~~~ 280 (289)
T 3e48_A 205 KELAAILSEASGTEIKYEPVSLETFAEMYDEPKGFGALLASMYHAGARGLLDQESNDFKQLVNDQPQ--TLQSFLQEN 280 (289)
T ss_dssp HHHHHHHHHHHTSCCEECCCCHHHHHHHTCCSTTHHHHHHHHHHHHHTTTTCCCCSHHHHHHSSCCC--CHHHHHHC-
T ss_pred HHHHHHHHHHHCCceeEEeCCHHHHHHHhcCCccHHHHHHHHHHHHHCCCccccCchHHHHhCCCCC--CHHHHHHHH
Confidence 999999999999873 345555544433222 0 00 0111222233344 45899999 899998753
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-32 Score=231.37 Aligned_cols=219 Identities=20% Similarity=0.240 Sum_probs=170.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
||+|||||||||||++++++|+++|++|++++|++.+... .. ..+..+|+.|++.+.++++++|+|||+|+..
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~---~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~-- 74 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAE--AH---EEIVACDLADAQAVHDLVKDCDGIIHLGGVS-- 74 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCCC--TT---EEECCCCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCccccC--CC---ccEEEccCCCHHHHHHHHcCCCEEEECCcCC--
Confidence 5689999999999999999999999999999998754211 11 1255689999999999999999999999964
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC-CceecCCCCCC--Cch-HHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE-TEVFDESSPSG--NDY-LAEVCREWEGT 175 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~-~~~~~e~~~~~--~~y-~~k~~~~~~~~ 175 (325)
........+++|+.++.++++++++ .+++++||+||..+ |+... ..+++|+++.. ..| .+|...|....
T Consensus 75 ---~~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~ 147 (267)
T 3ay3_A 75 ---VERPWNDILQANIIGAYNLYEAARN--LGKPRIVFASSNHT--IGYYPRTTRIDTEVPRRPDSLYGLSKCFGEDLAS 147 (267)
T ss_dssp ---SCCCHHHHHHHTHHHHHHHHHHHHH--TTCCEEEEEEEGGG--STTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCEEEEeCCHHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 2234577889999999999999998 68889999999998 87643 45788887754 356 67877777776
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN 254 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~ 254 (325)
.+....+++++++||+++|+... ++...+++++++|+|++++.+++++.. .++|++.++.
T Consensus 148 ~~~~~~gi~~~~lrp~~v~~~~~-------------------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~~~~~~~ 208 (267)
T 3ay3_A 148 LYYHKFDIETLNIRIGSCFPKPK-------------------DARMMATWLSVDDFMRLMKRAFVAPKLGCTVVYGASAN 208 (267)
T ss_dssp HHHHTTCCCEEEEEECBCSSSCC-------------------SHHHHHHBCCHHHHHHHHHHHHHSSCCCEEEEEECCSC
T ss_pred HHHHHcCCCEEEEeceeecCCCC-------------------CCCeeeccccHHHHHHHHHHHHhCCCCCceeEecCCCc
Confidence 66666799999999999984321 122346799999999999999998764 4688888766
Q ss_pred CCCHHHHHHHHHHHhCCCC
Q 020476 255 PVRLAEMCDHLGNVLGRPS 273 (325)
Q Consensus 255 ~~s~~e~~~~i~~~~g~~~ 273 (325)
..++.|+.+. +.+|.++
T Consensus 209 ~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 209 TESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp SSCCBCCGGG--GGGCCCC
T ss_pred cccccCHHHH--HHcCCCC
Confidence 5555555544 4455443
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-32 Score=250.77 Aligned_cols=255 Identities=19% Similarity=0.243 Sum_probs=188.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC---CCeEEEEecCCCcccccC------CC-------------CCccccCceeec-
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD---NHQVRVLTRSRSKAELIF------PG-------------KKTRFFPGVMIA- 75 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~---g~~V~~~~r~~~~~~~~~------~~-------------~~~~~~~~~d~~- 75 (325)
.+|+|||||||||||++|+++|++. |++|++++|+........ .. .....+..+|+.
T Consensus 72 ~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~~ 151 (478)
T 4dqv_A 72 ELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADRLEVVAGDKSE 151 (478)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHHHHHHHTTTEEEEECCTTS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHHHHHHHHhcchhhhhhhhhhccCceEEEEeECCC
Confidence 4689999999999999999999998 899999999876431100 00 001113356776
Q ss_pred -----CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC
Q 020476 76 -----EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE 150 (325)
Q Consensus 76 -----d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~ 150 (325)
|.+.+.++++++|+|||||+.... .++...+++|+.++.+++++|++ .++++|||+||.++ |+...
T Consensus 152 ~~~gld~~~~~~~~~~~D~Vih~Aa~~~~-----~~~~~~~~~Nv~gt~~ll~aa~~--~~~~~~V~iSS~~v--~~~~~ 222 (478)
T 4dqv_A 152 PDLGLDQPMWRRLAETVDLIVDSAAMVNA-----FPYHELFGPNVAGTAELIRIALT--TKLKPFTYVSTADV--GAAIE 222 (478)
T ss_dssp GGGGCCHHHHHHHHHHCCEEEECCSSCSB-----SSCCEEHHHHHHHHHHHHHHHTS--SSCCCEEEEEEGGG--GTTSC
T ss_pred cccCCCHHHHHHHHcCCCEEEECccccCC-----cCHHHHHHHHHHHHHHHHHHHHh--CCCCeEEEEeehhh--cCccC
Confidence 556788888899999999997532 33446778999999999999999 78899999999988 88776
Q ss_pred CceecCCCCCC-------------Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC--C--cccchHHHH-H--
Q 020476 151 TEVFDESSPSG-------------NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG--G--ALAKMIPLF-M-- 209 (325)
Q Consensus 151 ~~~~~e~~~~~-------------~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~--~--~~~~~~~~~-~-- 209 (325)
..+++|+++.. ..| .+|...|.....+..+.+++++++||++|||++. + ....++..+ .
T Consensus 223 ~~~~~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~ 302 (478)
T 4dqv_A 223 PSAFTEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSL 302 (478)
T ss_dssp TTTCCSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHH
T ss_pred CCCcCCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHH
Confidence 67777776531 237 7888888888777766699999999999999843 1 222333322 1
Q ss_pred HHcCC-C--C----CC---CcceeeeccHHHHHHHHHHHHcC----C-CCCceEEeeCCCC--CCHHHHHHHHHHHhCCC
Q 020476 210 MFAGG-P--L----GS---GQQWFSWIHLDDIVNLIYEALSN----P-SYRGVINGTAPNP--VRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 210 ~~~~~-~--~----~~---~~~~~~~v~v~D~a~a~~~~~~~----~-~~~~~~~~~~~~~--~s~~e~~~~i~~~~g~~ 272 (325)
...+. | + ++ +...++++|++|+|++++.++.+ + ..+++||++++++ +|+.|+++.+.+. |.+
T Consensus 303 ~~~g~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~ 381 (478)
T 4dqv_A 303 MATGIAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSLAGFATYHVMNPHDDGIGLDEYVDWLIEA-GYP 381 (478)
T ss_dssp HHHCEEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCCCSEEEEEESCCCCSSCSHHHHHHHHHHT-TCS
T ss_pred HHcCcccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCCCCCceEEecCCCCCCcCHHHHHHHHHHc-CCC
Confidence 11121 1 1 11 26788999999999999999875 3 3456999999987 9999999999996 665
Q ss_pred C-CC-CccHHHHH
Q 020476 273 S-WL-PVPEFALK 283 (325)
Q Consensus 273 ~-~~-~~~~~~~~ 283 (325)
. .+ ++++|...
T Consensus 382 ~~~i~~~~~w~~~ 394 (478)
T 4dqv_A 382 IRRIDDFAEWLQR 394 (478)
T ss_dssp CEEESSHHHHHHH
T ss_pred cccCCCHHHHHHH
Confidence 3 33 56666543
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=7.5e-32 Score=229.90 Aligned_cols=262 Identities=15% Similarity=0.140 Sum_probs=184.4
Q ss_pred eEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
+|||||||||||++++++|+++ |++|++++|++++...+.... .....+|+.|++.+.++++++|+|||+|+..
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~--~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~-- 76 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAAQG--ITVRQADYGDEAALTSALQGVEKLLLISSSE-- 76 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHHTT--CEEEECCTTCHHHHHHHTTTCSEEEECC-----
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhcCC--CeEEEcCCCCHHHHHHHHhCCCEEEEeCCCC--
Confidence 5899999999999999999998 999999999876543221110 1144679999999999999999999999842
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHh
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALK 178 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~ 178 (325)
. ..|+.++.+++++|++ .+++++||+||.++ |. ....| .+|...|....
T Consensus 77 ----~-------~~~~~~~~~l~~a~~~--~~~~~~v~~Ss~~~--~~------------~~~~y~~sK~~~e~~~~--- 126 (286)
T 2zcu_A 77 ----V-------GQRAPQHRNVINAAKA--AGVKFIAYTSLLHA--DT------------SPLGLADEHIETEKMLA--- 126 (286)
T ss_dssp ----------------CHHHHHHHHHHH--HTCCEEEEEEETTT--TT------------CCSTTHHHHHHHHHHHH---
T ss_pred ----c-------hHHHHHHHHHHHHHHH--cCCCEEEEECCCCC--CC------------CcchhHHHHHHHHHHHH---
Confidence 0 1478899999999998 68899999999877 52 11246 66655554432
Q ss_pred hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC-CCCCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEeeCCCCC
Q 020476 179 VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-PLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGTAPNPV 256 (325)
Q Consensus 179 ~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~~~~~~ 256 (325)
..+++++++||+.++++.. .++.... ..+. ..+.++..+++++++|+|++++.+++++. .+++||+++++++
T Consensus 127 -~~~~~~~ilrp~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~~~~~ 200 (286)
T 2zcu_A 127 -DSGIVYTLLRNGWYSENYL----ASAPAAL-EHGVFIGAAGDGKIASATRADYAAAAARVISEAGHEGKVYELAGDSAW 200 (286)
T ss_dssp -HHCSEEEEEEECCBHHHHH----TTHHHHH-HHTEEEESCTTCCBCCBCHHHHHHHHHHHHHSSSCTTCEEEECCSSCB
T ss_pred -HcCCCeEEEeChHHhhhhH----HHhHHhh-cCCceeccCCCCccccccHHHHHHHHHHHhcCCCCCCceEEEeCCCcC
Confidence 2589999999987666431 1111111 1111 13556778999999999999999998864 4569999999999
Q ss_pred CHHHHHHHHHHHhCCCCC-CCccHHHHHHHh---Cccce-----------eeccCcccChhHHHH-cCCCcccccHHHHH
Q 020476 257 RLAEMCDHLGNVLGRPSW-LPVPEFALKAVL---GEGAF-----------VVLEGQRVVPARAKE-LGFPFKYRYVKDAL 320 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~---~~~~~-----------~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l 320 (325)
|+.|+++.+.+.+|++.. .+.|........ +.... ........+++|+++ +||+|. +++|+|
T Consensus 201 s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~--~~~e~l 278 (286)
T 2zcu_A 201 TLTQLAAELTKQSGKQVTYQNLSEADFAAALKSVGLPDGLADMLADSDVGASKGGLFDDSKTLSKLIGHPTT--TLAESV 278 (286)
T ss_dssp CHHHHHHHHHHHHSSCCEEEECCHHHHHHHHTTSSCCHHHHHHHHHHHHHHHTTTTCCCCCHHHHHHTSCCC--CHHHHH
T ss_pred CHHHHHHHHHHHHCCCCceeeCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCCccCchHHHHHhCcCCC--CHHHHH
Confidence 999999999999998733 455555433221 11100 011224456677765 898665 799999
Q ss_pred HHHhC
Q 020476 321 KAIMS 325 (325)
Q Consensus 321 ~~~~~ 325 (325)
+++++
T Consensus 279 ~~~~~ 283 (286)
T 2zcu_A 279 SHLFN 283 (286)
T ss_dssp HGGGC
T ss_pred HHHHh
Confidence 98864
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.4e-32 Score=240.34 Aligned_cols=209 Identities=21% Similarity=0.245 Sum_probs=173.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
|||||||||||||++|+++|+++|+ +|++++|+ .|++.+.++++++|+|||+|+....
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~---------------------~d~~~l~~~~~~~d~Vih~a~~~~~ 59 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ---------------------TKEEELESALLKADFIVHLAGVNRP 59 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT---------------------CCHHHHHHHHHHCSEEEECCCSBCT
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC---------------------CCHHHHHHHhccCCEEEECCcCCCC
Confidence 6999999999999999999999999 99988775 3677888888999999999996422
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-CEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~ 177 (325)
..+...++.|+.++.+++++|++ .+++ ++||+||.++ |+ ...| .+|...|.....+
T Consensus 60 -----~~~~~~~~~n~~~~~~l~~a~~~--~~~~~~~v~~Ss~~~--~~-------------~~~Y~~sK~~~E~~~~~~ 117 (369)
T 3st7_A 60 -----EHDKEFSLGNVSYLDHVLDILTR--NTKKPAILLSSSIQA--TQ-------------DNPYGESKLQGEQLLREY 117 (369)
T ss_dssp -----TCSTTCSSSCCBHHHHHHHHHTT--CSSCCEEEEEEEGGG--GS-------------CSHHHHHHHHHHHHHHHH
T ss_pred -----CCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEeCchhh--cC-------------CCCchHHHHHHHHHHHHH
Confidence 23445677899999999999998 6776 8999999988 65 4567 7888888887777
Q ss_pred hhcCCceEEEEEeceEEcCCCCc-ccchHHHH--HHHcCCCC--CCCcceeeeccHHHHHHHHHHHHcCCCC--CceEEe
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSY--RGVING 250 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~--~~~~~~~~--~~~~~~~~~v~v~D~a~a~~~~~~~~~~--~~~~~~ 250 (325)
.++.+++++++||+++||++... ...++..+ ....+.++ .+++..++++|++|+|++++.+++++.. +++||+
T Consensus 118 ~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~i 197 (369)
T 3st7_A 118 AEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVNDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTV 197 (369)
T ss_dssp HHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCSCTTCEEEEEEHHHHHHHHHHHHHTCCCEETTEECC
T ss_pred HHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEecCCCeEEEEEEHHHHHHHHHHHHhCCcccCCceEEe
Confidence 77779999999999999997532 22344333 33445543 6788899999999999999999999876 679999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCC
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
++++++|+.|+++.+++.+|.+
T Consensus 198 ~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 198 PNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp SCCEEEEHHHHHHHHHHHHHHH
T ss_pred CCCCceeHHHHHHHHHHHhCCC
Confidence 9999999999999999999865
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=230.10 Aligned_cols=231 Identities=15% Similarity=0.199 Sum_probs=177.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CC-eEEEEecCCCcccccCCC--CCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|+||||||||+||++++++|++. |+ +|++++|++.+....... .....+..+|+.|.+.+.++++++|+|||+||
T Consensus 21 ~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~Aa 100 (344)
T 2gn4_A 21 NQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAAA 100 (344)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECCC
Confidence 479999999999999999999999 97 999999986543221100 00112445799999999999999999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG 174 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~ 174 (325)
... .......+.+.+++|+.++.++++++.+ .+++++|++||..+ +. +...| .+|...|...
T Consensus 101 ~~~-~~~~~~~~~~~~~~Nv~gt~~l~~aa~~--~~v~~~V~~SS~~~--~~------------p~~~Y~~sK~~~E~~~ 163 (344)
T 2gn4_A 101 LKH-VPIAEYNPLECIKTNIMGASNVINACLK--NAISQVIALSTDKA--AN------------PINLYGATKLCSDKLF 163 (344)
T ss_dssp CCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEECCGGG--SS------------CCSHHHHHHHHHHHHH
T ss_pred CCC-CCchhcCHHHHHHHHHHHHHHHHHHHHh--CCCCEEEEecCCcc--CC------------CccHHHHHHHHHHHHH
Confidence 652 1122345678899999999999999999 78899999999765 32 23567 7888888777
Q ss_pred HHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCC-C--CCCCcceeeeccHHHHHHHHHHHHcCCCCCceE
Q 020476 175 TALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-P--LGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVI 248 (325)
Q Consensus 175 ~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~ 248 (325)
..+... .+++++++||+++||+.+.....+.. ....+. + +.++...+++++++|+|++++.+++++..+++|
T Consensus 164 ~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~--~~~~g~~~~~i~~~~~~r~~i~v~D~a~~v~~~l~~~~~g~~~ 241 (344)
T 2gn4_A 164 VSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKK--LVQNKASEIPITDIRMTRFWITLDEGVSFVLKSLKRMHGGEIF 241 (344)
T ss_dssp HHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHH--HHHHTCCCEEESCTTCEEEEECHHHHHHHHHHHHHHCCSSCEE
T ss_pred HHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHH--HHHcCCCceEEeCCCeEEeeEEHHHHHHHHHHHHhhccCCCEE
Confidence 766653 58999999999999987543222221 233454 3 367778899999999999999999887655699
Q ss_pred EeeCCCCCCHHHHHHHHHHHhC
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g 270 (325)
++.++ .+|+.|+++.+.+.++
T Consensus 242 ~~~~~-~~s~~el~~~i~~~~~ 262 (344)
T 2gn4_A 242 VPKIP-SMKMTDLAKALAPNTP 262 (344)
T ss_dssp EECCC-EEEHHHHHHHHCTTCC
T ss_pred ecCCC-cEEHHHHHHHHHHhCC
Confidence 98776 6999999999987664
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=217.69 Aligned_cols=220 Identities=20% Similarity=0.217 Sum_probs=177.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
||+||||||+|+||+++++.|+++|++|++++|++.+.... ......+|+.|.+++.++++++|+||||||..
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~~~-----~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~-- 75 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPAGP-----NEECVQCDLADANAVNAMVAGCDGIVHLGGIS-- 75 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCCCT-----TEEEEECCTTCHHHHHHHHTTCSEEEECCSCC--
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCccccCC-----CCEEEEcCCCCHHHHHHHHcCCCEEEECCCCc--
Confidence 46899999999999999999999999999999987654311 11245689999999999999999999999973
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC-CCceecCCCCCC--Cch-HHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDESSPSG--NDY-LAEVCREWEGT 175 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~-~~~~~~e~~~~~--~~y-~~k~~~~~~~~ 175 (325)
....++.++++|+.++.++++++++ .+.+++|++||..+ ||.. ...+++|+.+.. ..| .+|...|....
T Consensus 76 ---~~~~~~~~~~~N~~g~~~l~~a~~~--~~~~~iv~~SS~~~--~g~~~~~~~~~e~~~~~~~~~Y~~sK~~~e~~~~ 148 (267)
T 3rft_A 76 ---VEKPFEQILQGNIIGLYNLYEAARA--HGQPRIVFASSNHT--IGYYPQTERLGPDVPARPDGLYGVSKCFGENLAR 148 (267)
T ss_dssp ---SCCCHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GTTSBTTSCBCTTSCCCCCSHHHHHHHHHHHHHH
T ss_pred ---CcCCHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEEcchHH--hCCCCCCCCCCCCCCCCCCChHHHHHHHHHHHHH
Confidence 3345678899999999999999998 78899999999988 7643 344677777644 457 78888888777
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCC-ceEEeeCCC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR-GVINGTAPN 254 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~-~~~~~~~~~ 254 (325)
.+..+.+++++++||+.++|+.. ++...+++++++|+++++..+++.+... .++++.+++
T Consensus 149 ~~a~~~g~~~~~vr~~~v~~~~~-------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~~~~~~~~~s~~ 209 (267)
T 3rft_A 149 MYFDKFGQETALVRIGSCTPEPN-------------------NYRMLSTWFSHDDFVSLIEAVFRAPVLGCPVVWGASAN 209 (267)
T ss_dssp HHHHHHCCCEEEEEECBCSSSCC-------------------STTHHHHBCCHHHHHHHHHHHHHCSCCCSCEEEECCCC
T ss_pred HHHHHhCCeEEEEEeecccCCCC-------------------CCCceeeEEcHHHHHHHHHHHHhCCCCCceEEEEeCCC
Confidence 77767799999999999998732 2344567899999999999999987754 488898888
Q ss_pred CCCHHHHHHHHHHHhCCCCC
Q 020476 255 PVRLAEMCDHLGNVLGRPSW 274 (325)
Q Consensus 255 ~~s~~e~~~~i~~~~g~~~~ 274 (325)
+.++.++... +.+|.++.
T Consensus 210 ~~~~~~~~~~--~~~g~~p~ 227 (267)
T 3rft_A 210 DAGWWDNSHL--GFLGWKPK 227 (267)
T ss_dssp TTCCBCCGGG--GGGCCCCC
T ss_pred CCCcccChhH--HHCCCCCC
Confidence 8888877443 66776543
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.6e-31 Score=215.24 Aligned_cols=205 Identities=15% Similarity=0.178 Sum_probs=158.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecC-CchhHhhhCCCCEEEECCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d-~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
|||+||||||+||++++++|+++|++|++++|++++.... .. ..+..+|+.| ++++.++++++|+|||||+....
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~---~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~ 76 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY-NN---VKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK 76 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC-TT---EEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTS
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc-CC---ceEEEecccCCHHHHHHHHcCCCEEEECCcCCCC
Confidence 6999999999999999999999999999999998665433 11 1255689999 99999999999999999996521
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHHHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTA 176 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~ 176 (325)
..+++|+.++.++++++++ .+++++|++||.++ ++. .+..| .++ ...| .+|...|....
T Consensus 77 ---------~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~---~~~~e-~~~~~~~~Y~~sK~~~e~~~~- 138 (219)
T 3dqp_A 77 ---------SLLKVDLYGAVKLMQAAEK--AEVKRFILLSTIFS--LQP---EKWIG-AGFDALKDYYIAKHFADLYLT- 138 (219)
T ss_dssp ---------SCCCCCCHHHHHHHHHHHH--TTCCEEEEECCTTT--TCG---GGCCS-HHHHHTHHHHHHHHHHHHHHH-
T ss_pred ---------CcEeEeHHHHHHHHHHHHH--hCCCEEEEECcccc--cCC---Ccccc-cccccccHHHHHHHHHHHHHH-
Confidence 2566899999999999999 78899999999766 442 23333 221 3345 55655544433
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCCC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNP 255 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~~ 255 (325)
...+++++++||+++||+....... .+...+++++++|+|++++.+++++.. +++||++++.
T Consensus 139 --~~~~i~~~ilrp~~v~g~~~~~~~~--------------~~~~~~~~i~~~Dva~~i~~~l~~~~~~g~~~~i~~g~- 201 (219)
T 3dqp_A 139 --KETNLDYTIIQPGALTEEEATGLID--------------INDEVSASNTIGDVADTIKELVMTDHSIGKVISMHNGK- 201 (219)
T ss_dssp --HSCCCEEEEEEECSEECSCCCSEEE--------------ESSSCCCCEEHHHHHHHHHHHHTCGGGTTEEEEEEECS-
T ss_pred --hccCCcEEEEeCceEecCCCCCccc--------------cCCCcCCcccHHHHHHHHHHHHhCccccCcEEEeCCCC-
Confidence 4579999999999999986422111 125567899999999999999998764 5599998885
Q ss_pred CCHHHHHHH
Q 020476 256 VRLAEMCDH 264 (325)
Q Consensus 256 ~s~~e~~~~ 264 (325)
.++.|+.+.
T Consensus 202 ~~~~e~~~~ 210 (219)
T 3dqp_A 202 TAIKEALES 210 (219)
T ss_dssp EEHHHHHHT
T ss_pred ccHHHHHHH
Confidence 999988764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=215.49 Aligned_cols=215 Identities=15% Similarity=0.169 Sum_probs=159.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCceeecCCchhHhhhCCCCEEEECC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
...+.|+|+||||||+||++++++|+++|++|++++|++++........ . ....+|+. +.+.+++.++|+|||+|
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~--~~~~~~~Dl~--~~~~~~~~~~D~vi~~a 92 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRERG--ASDIVVANLE--EDFSHAFASIDAVVFAA 92 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHTT--CSEEEECCTT--SCCGGGGTTCSEEEECC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHhCC--CceEEEcccH--HHHHHHHcCCCEEEECC
Confidence 4455689999999999999999999999999999999887654322110 1 14456777 77888889999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC-CCCCch-HHHHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-PSGNDY-LAEVCREW 172 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-~~~~~y-~~k~~~~~ 172 (325)
|... ...+...+++|+.++.++++++++ .+++++|++||.+. +.. +.. ++...| .+|...|.
T Consensus 93 g~~~-----~~~~~~~~~~n~~~~~~l~~a~~~--~~~~~iv~~SS~~~--~~~-------~~~~~~~~~Y~~sK~~~e~ 156 (236)
T 3e8x_A 93 GSGP-----HTGADKTILIDLWGAIKTIQEAEK--RGIKRFIMVSSVGT--VDP-------DQGPMNMRHYLVAKRLADD 156 (236)
T ss_dssp CCCT-----TSCHHHHHHTTTHHHHHHHHHHHH--HTCCEEEEECCTTC--SCG-------GGSCGGGHHHHHHHHHHHH
T ss_pred CCCC-----CCCccccchhhHHHHHHHHHHHHH--cCCCEEEEEecCCC--CCC-------CCChhhhhhHHHHHHHHHH
Confidence 9642 245778899999999999999998 68899999999655 321 111 233455 55655544
Q ss_pred HHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC-CCceEEee
Q 020476 173 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-YRGVINGT 251 (325)
Q Consensus 173 ~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~~~~~~~ 251 (325)
... ..+++++++||+.++|+........ ...+...+++++++|+|++++.+++++. .+++|+++
T Consensus 157 ~~~----~~gi~~~~lrpg~v~~~~~~~~~~~-----------~~~~~~~~~~i~~~Dva~~~~~~~~~~~~~g~~~~v~ 221 (236)
T 3e8x_A 157 ELK----RSSLDYTIVRPGPLSNEESTGKVTV-----------SPHFSEITRSITRHDVAKVIAELVDQQHTIGKTFEVL 221 (236)
T ss_dssp HHH----HSSSEEEEEEECSEECSCCCSEEEE-----------ESSCSCCCCCEEHHHHHHHHHHHTTCGGGTTEEEEEE
T ss_pred HHH----HCCCCEEEEeCCcccCCCCCCeEEe-----------ccCCCcccCcEeHHHHHHHHHHHhcCccccCCeEEEe
Confidence 332 5799999999999999864221110 1233346789999999999999999875 45599999
Q ss_pred CCCCCCHHHHHHHHH
Q 020476 252 APNPVRLAEMCDHLG 266 (325)
Q Consensus 252 ~~~~~s~~e~~~~i~ 266 (325)
++ ..++.|+++.++
T Consensus 222 ~~-~~~~~e~~~~i~ 235 (236)
T 3e8x_A 222 NG-DTPIAKVVEQLG 235 (236)
T ss_dssp EC-SEEHHHHHHTC-
T ss_pred CC-CcCHHHHHHHhc
Confidence 88 599999998765
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.5e-30 Score=210.00 Aligned_cols=216 Identities=14% Similarity=0.131 Sum_probs=139.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
||||||||||+||++++++|+++|++|++++|++++...+.... .+..+|+.|.+. +.+.++|+||||||....
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~---~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~- 74 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI---NILQKDIFDLTL--SDLSDQNVVVDAYGISPD- 74 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHCSSS---EEEECCGGGCCH--HHHTTCSEEEECCCSSTT-
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhccCCC---eEEeccccChhh--hhhcCCCEEEECCcCCcc-
Confidence 68999999999999999999999999999999987654433211 255688888887 778999999999996411
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~~~~~~~~ 177 (325)
....|+.++.++++++++ .+.+++|++||.++. |+.....+..|+.+. ...| .+|...+.+....
T Consensus 75 ---------~~~~~~~~~~~l~~a~~~--~~~~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~ 142 (221)
T 3ew7_A 75 ---------EAEKHVTSLDHLISVLNG--TVSPRLLVVGGAASL-QIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLK 142 (221)
T ss_dssp ---------TTTSHHHHHHHHHHHHCS--CCSSEEEEECCCC--------------------CCCSCCHHHHHHHHHHHH
T ss_pred ---------ccchHHHHHHHHHHHHHh--cCCceEEEEecceEE-EcCCCCccccccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 134689999999999999 678999999998762 454443344555543 3346 6777666654333
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCCCC
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPV 256 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~~~ 256 (325)
....+++++++||+.+||++... ..+ .. .+..+.......++++++|+|++++.+++++.. +.+||++++.+.
T Consensus 143 ~~~~gi~~~ivrp~~v~g~~~~~-~~~----~~-~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~g~~~~~~~~~~~ 216 (221)
T 3ew7_A 143 SHQAEFSWTYISPSAMFEPGERT-GDY----QI-GKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNEHFTVAGKLEH 216 (221)
T ss_dssp TTTTTSCEEEEECSSCCCCC---------------------------CCCHHHHHHHHHHHHHSCSCTTSEEECCC----
T ss_pred hhccCccEEEEeCcceecCCCcc-Cce----Ee-ccccceecCCCCceEeHHHHHHHHHHHHhCccccCCEEEECCCCcc
Confidence 32579999999999999984311 111 11 111111111123699999999999999999874 559999999877
Q ss_pred CHHH
Q 020476 257 RLAE 260 (325)
Q Consensus 257 s~~e 260 (325)
+..|
T Consensus 217 ~~~~ 220 (221)
T 3ew7_A 217 HHHH 220 (221)
T ss_dssp ----
T ss_pred cccc
Confidence 7654
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.9e-29 Score=206.21 Aligned_cols=216 Identities=18% Similarity=0.135 Sum_probs=152.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
||||||||||+||++++++|+++|++|++++|++++...+.... ..+..+|+.|.+. +.+.++|+||||||..
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~--~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~--- 73 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRLGAT--VATLVKEPLVLTE--ADLDSVDAVVDALSVP--- 73 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHTCTT--SEEEECCGGGCCH--HHHTTCSEEEECCCCC---
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccccCCC--ceEEecccccccH--hhcccCCEEEECCccC---
Confidence 68999999999999999999999999999999876654332211 1245678888888 7789999999999964
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC--ceecCCCCC--CCch-HHHHHHHHHHH
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET--EVFDESSPS--GNDY-LAEVCREWEGT 175 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~--~~~~e~~~~--~~~y-~~k~~~~~~~~ 175 (325)
+... ....|+.++.++++++++ .+ +++|++||.++. |+.... .+.++...+ ...| .+|...|.. .
T Consensus 74 -~~~~----~~~~n~~~~~~l~~a~~~--~~-~~~v~~SS~~~~-~~~~~~~~~~~~~~~~~~~~~~y~~sK~~~e~~-~ 143 (224)
T 3h2s_A 74 -WGSG----RGYLHLDFATHLVSLLRN--SD-TLAVFILGSASL-AMPGADHPMILDFPESAASQPWYDGALYQYYEY-Q 143 (224)
T ss_dssp -TTSS----CTHHHHHHHHHHHHTCTT--CC-CEEEEECCGGGS-BCTTCSSCGGGGCCGGGGGSTTHHHHHHHHHHH-H
T ss_pred -CCcc----hhhHHHHHHHHHHHHHHH--cC-CcEEEEecceee-ccCCCCccccccCCCCCccchhhHHHHHHHHHH-H
Confidence 1111 135799999999999999 67 899999998652 333322 234444444 4456 667666633 3
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCC
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN 254 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~ 254 (325)
.+....+++++++||+.+||++.... +. .....+..+...+++++++|+|++++.+++++.. +++|++++.+
T Consensus 144 ~~~~~~~i~~~ivrp~~v~g~~~~~~--~~-----~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~~~~~ 216 (224)
T 3h2s_A 144 FLQMNANVNWIGISPSEAFPSGPATS--YV-----AGKDTLLVGEDGQSHITTGNMALAILDQLEHPTAIRDRIVVRDAD 216 (224)
T ss_dssp HHTTCTTSCEEEEEECSBCCCCCCCC--EE-----EESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCCCTTSEEEEEECC
T ss_pred HHHhcCCCcEEEEcCccccCCCcccC--ce-----ecccccccCCCCCceEeHHHHHHHHHHHhcCccccCCEEEEecCc
Confidence 34445699999999999999853221 10 1112222334557899999999999999999874 5599999987
Q ss_pred CCCHHH
Q 020476 255 PVRLAE 260 (325)
Q Consensus 255 ~~s~~e 260 (325)
..++.+
T Consensus 217 ~~~~~~ 222 (224)
T 3h2s_A 217 LEHHHH 222 (224)
T ss_dssp ------
T ss_pred chhccc
Confidence 766554
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=220.14 Aligned_cols=230 Identities=15% Similarity=0.147 Sum_probs=163.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-ccC---C-CCCccccCceeecCCchhHhhhC--CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-LIF---P-GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~~---~-~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi 91 (325)
.+|+|||||||||||++|++.|++.|++|++++|+++... ... . .........+|+.|.+.+.++++ ++|+||
T Consensus 9 ~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi 88 (346)
T 3i6i_A 9 PKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVV 88 (346)
T ss_dssp --CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEE
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEE
Confidence 3579999999999999999999999999999999873211 000 0 00001144689999999999999 999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAE 167 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k 167 (325)
|+|+. .|+.++.+++++|++ .+ ++++|+ | + ||.. .+|..+..+ .| .+|
T Consensus 89 ~~a~~----------------~n~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~----~~e~~~~~p~~~y~~sK 140 (346)
T 3i6i_A 89 STVGG----------------ESILDQIALVKAMKA--VGTIKRFLP-S---E--FGHD----VNRADPVEPGLNMYREK 140 (346)
T ss_dssp ECCCG----------------GGGGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSC----TTTCCCCTTHHHHHHHH
T ss_pred ECCch----------------hhHHHHHHHHHHHHH--cCCceEEee-c---c--cCCC----CCccCcCCCcchHHHHH
Confidence 99984 388999999999998 67 888775 3 2 5532 234444333 34 445
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
...+... +..+++++++||+.++|........ +......+.. .++++..+++++++|+|++++.++.++..
T Consensus 141 ~~~e~~l----~~~g~~~tivrpg~~~g~~~~~~~~--~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~ 214 (346)
T 3i6i_A 141 RRVRQLV----EESGIPFTYICCNSIASWPYYNNIH--PSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT 214 (346)
T ss_dssp HHHHHHH----HHTTCCBEEEECCEESSCCCSCC-------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHH----HHcCCCEEEEEecccccccCccccc--cccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc
Confidence 4443332 3368999999999999975322211 1111112222 27788899999999999999999998763
Q ss_pred -CceEEeeC-CCCCCHHHHHHHHHHHhCCCCC-CCccHHHH
Q 020476 245 -RGVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFAL 282 (325)
Q Consensus 245 -~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~ 282 (325)
+++|++.+ ++.+|+.|+++.+++.+|++.. ..++....
T Consensus 215 ~~~~~~i~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~ 255 (346)
T 3i6i_A 215 LNKSVHFRPSCNCLNINELASVWEKKIGRTLPRVTVTEDDL 255 (346)
T ss_dssp TTEEEECCCGGGEECHHHHHHHHHHHHTSCCCEEEECHHHH
T ss_pred cCeEEEEeCCCCCCCHHHHHHHHHHHHCCCCceEecCHHHH
Confidence 56899985 5789999999999999998743 34454443
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=3.6e-30 Score=220.92 Aligned_cols=270 Identities=14% Similarity=0.027 Sum_probs=184.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCccc--ccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+|+|+||||||+||++++++|+++| ++|++++|++++.. .+.... .....+|+.|++.+.++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~~~~--~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~ 82 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELRLQG--AEVVQGDQDDQVIMELALNGAYATFIVTNY 82 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHHHCC--CEEEEecCCCHHHHHHHHhcCCEEEEeCCC
Confidence 4799999999999999999999998 99999999876531 111100 114467999999999999999999999973
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~ 175 (325)
.. ....+.|+.++.++++++++ .+++++|++|+.++ |+... . .+...| .+|...|....
T Consensus 83 ~~---------~~~~~~~~~~~~~~~~aa~~--~gv~~iv~~S~~~~--~~~~~------~-~~~~~y~~sK~~~e~~~~ 142 (299)
T 2wm3_A 83 WE---------SCSQEQEVKQGKLLADLARR--LGLHYVVYSGLENI--KKLTA------G-RLAAAHFDGKGEVEEYFR 142 (299)
T ss_dssp HH---------HTCHHHHHHHHHHHHHHHHH--HTCSEEEECCCCCH--HHHTT------T-SCCCHHHHHHHHHHHHHH
T ss_pred Cc---------cccchHHHHHHHHHHHHHHH--cCCCEEEEEcCccc--cccCC------C-cccCchhhHHHHHHHHHH
Confidence 20 00134678899999999998 78899999887766 55221 1 123445 55655544332
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC----CCCCCcceeeeccHHHHHHHHHHHHcCCC--CCceEE
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVIN 249 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~~ 249 (325)
..+++++++||+++||+....+ .+. ....+. .+..++..+++++++|+|++++.++.++. .+.+|+
T Consensus 143 ----~~gi~~~ilrp~~~~~~~~~~~---~~~-~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~ 214 (299)
T 2wm3_A 143 ----DIGVPMTSVRLPCYFENLLSHF---LPQ-KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIG 214 (299)
T ss_dssp ----HHTCCEEEEECCEEGGGGGTTT---CCE-ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEE
T ss_pred ----HCCCCEEEEeecHHhhhchhhc---CCc-ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhhhCCeEEE
Confidence 2589999999999999742211 100 011221 12346778899999999999999998753 356999
Q ss_pred eeCCCCCCHHHHHHHHHHHhCCCC-CCCccHHHHHHHhCcc--------ceeeccCcccChhHHHHcCCCcccccHHHHH
Q 020476 250 GTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFALKAVLGEG--------AFVVLEGQRVVPARAKELGFPFKYRYVKDAL 320 (325)
Q Consensus 250 ~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l 320 (325)
+++ +.+|+.|+++.+.+.+|++. ..++|.+..... +.+ ..+.......+....+.+|.+|+ +++|++
T Consensus 215 ~~g-~~~s~~e~~~~~~~~~g~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 290 (299)
T 2wm3_A 215 LST-CRHTAEEYAALLTKHTRKVVHDAKMTPEDYEKL-GFPGARDLANMFRFYALRPDRDIELTLRLNPKAL--TLDQWL 290 (299)
T ss_dssp CCS-EEECHHHHHHHHHHHHSSCEEECCCCTHHHHTT-CSTTHHHHHHHHHHHTTCCCCCHHHHHHHCTTCC--CHHHHH
T ss_pred eee-ccCCHHHHHHHHHHHHCCCceeEecCHHHHHhc-CCCcHHHHHHHHHHHHhcCCCCHHHHHHhCCCCC--CHHHHH
Confidence 986 57999999999999999873 345554443321 110 00111111222233356899988 899999
Q ss_pred HHH
Q 020476 321 KAI 323 (325)
Q Consensus 321 ~~~ 323 (325)
++.
T Consensus 291 ~~~ 293 (299)
T 2wm3_A 291 EQH 293 (299)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.2e-29 Score=210.60 Aligned_cols=232 Identities=17% Similarity=0.107 Sum_probs=164.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
++|+|+||||+|+||++++++|+++ |++|++++|++.+........ .+..+|+.|.+.+.++++++|+|||+|+.
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~D~~d~~~~~~~~~~~d~vi~~a~~ 79 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA---DVFIGDITDADSINPAFQGIDALVILTSA 79 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCT---TEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcCCCe---eEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence 4679999999999999999999999 899999999865543332111 24568999999999999999999999986
Q ss_pred CCCCC---------CC---hhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 97 PIGTR---------WS---SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 97 ~~~~~---------~~---~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
..... .. .+.....+++|+.++.++++++++ .+.+++|++||.++ +.... +.... ....|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~SS~~~--~~~~~--~~~~~--~~~~y 151 (253)
T 1xq6_A 80 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNPDH--PLNKL--GNGNI 151 (253)
T ss_dssp CCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCTTC--GGGGG--GGCCH
T ss_pred cccccccccccccccchhhccccccceeeeHHHHHHHHHHHHH--cCCCEEEEEcCccC--CCCCC--ccccc--cchhH
Confidence 42110 01 111224678999999999999998 67889999999876 42111 10000 01234
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.+|...|... +..+++++++||+.+||+.......+. ....++.. ...++++++|+|++++.+++++.
T Consensus 152 ~~sK~~~e~~~----~~~~i~~~~vrpg~v~~~~~~~~~~~~-----~~~~~~~~--~~~~~~~~~Dva~~~~~~~~~~~ 220 (253)
T 1xq6_A 152 LVWKRKAEQYL----ADSGTPYTIIRAGGLLDKEGGVRELLV-----GKDDELLQ--TDTKTVPRADVAEVCIQALLFEE 220 (253)
T ss_dssp HHHHHHHHHHH----HTSSSCEEEEEECEEECSCSSSSCEEE-----ESTTGGGG--SSCCEEEHHHHHHHHHHHTTCGG
T ss_pred HHHHHHHHHHH----HhCCCceEEEecceeecCCcchhhhhc-----cCCcCCcC--CCCcEEcHHHHHHHHHHHHcCcc
Confidence 3555444433 236899999999999998643211110 00111111 13568999999999999998865
Q ss_pred C-CceEEeeCCC---CCCHHHHHHHHHHHhCCC
Q 020476 244 Y-RGVINGTAPN---PVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 244 ~-~~~~~~~~~~---~~s~~e~~~~i~~~~g~~ 272 (325)
. +++||+++++ ++|+.|+++.+.+.+|++
T Consensus 221 ~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~~ 253 (253)
T 1xq6_A 221 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 253 (253)
T ss_dssp GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCCC
T ss_pred ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCCC
Confidence 3 4599999864 599999999999998863
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=3.3e-29 Score=204.53 Aligned_cols=205 Identities=18% Similarity=0.141 Sum_probs=151.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
|+|+|+||||+|+||++++++|+++|+ +|++++|++.+. ... .....+|+.|.+.+.+++ +|+|||+|+.
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~~---~~~---~~~~~~D~~~~~~~~~~~--~d~vi~~a~~ 75 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE---HPR---LDNPVGPLAELLPQLDGS--IDTAFCCLGT 75 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC---CTT---EECCBSCHHHHGGGCCSC--CSEEEECCCC
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCccc---CCC---ceEEeccccCHHHHHHhh--hcEEEECeee
Confidence 567999999999999999999999998 999999987651 111 124467888888888877 9999999986
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~ 175 (325)
... ....+...+++|+.++.++++++++ .+.+++|++||.++ |+. +...| .+|...|...
T Consensus 76 ~~~---~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~v~~Ss~~~--~~~-----------~~~~y~~sK~~~e~~~- 136 (215)
T 2a35_A 76 TIK---EAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAK-----------SSIFYNRVKGELEQAL- 136 (215)
T ss_dssp CHH---HHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHHHHHHHHHH-
T ss_pred ccc---cCCCHHHHHHhhHHHHHHHHHHHHH--cCCCEEEEECCccc--CCC-----------CccHHHHHHHHHHHHH-
Confidence 421 2345678889999999999999999 68889999999987 652 23456 5555444333
Q ss_pred HHhhcCCce-EEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCC
Q 020476 176 ALKVNKDVR-LALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPN 254 (325)
Q Consensus 176 ~~~~~~~~~-~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~ 254 (325)
...+++ ++++||+.+||+.... .+...+. ....++.+ ..+++++++|+|++++.+++++. +++||+++++
T Consensus 137 ---~~~~~~~~~~vrp~~v~g~~~~~--~~~~~~~-~~~~~~~~--~~~~~i~~~Dva~~~~~~~~~~~-~~~~~i~~~~ 207 (215)
T 2a35_A 137 ---QEQGWPQLTIARPSLLFGPREEF--RLAEILA-APIARILP--GKYHGIEACDLARALWRLALEEG-KGVRFVESDE 207 (215)
T ss_dssp ---TTSCCSEEEEEECCSEESTTSCE--EGGGGTT-CCCC------CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEEHHH
T ss_pred ---HHcCCCeEEEEeCceeeCCCCcc--hHHHHHH-HhhhhccC--CCcCcEeHHHHHHHHHHHHhcCC-CCceEEcHHH
Confidence 235898 9999999999997542 1211111 01112222 26789999999999999999875 7899999887
Q ss_pred CCCHH
Q 020476 255 PVRLA 259 (325)
Q Consensus 255 ~~s~~ 259 (325)
.+++.
T Consensus 208 ~~~~~ 212 (215)
T 2a35_A 208 LRKLG 212 (215)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 65543
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=6.6e-28 Score=208.12 Aligned_cols=232 Identities=16% Similarity=0.239 Sum_probs=160.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-----cc---cCCCCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----EL---IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~---~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
+|+|+||||||+||++++++|+++|++|++++|+.+.. .. +... ......+|+.|++.+.++++++|+||
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~--~~~~~~~D~~d~~~l~~~~~~~d~vi 81 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQL--GAKLIEASLDDHQRLVDALKQVDVVI 81 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTT--TCEEECCCSSCHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhC--CeEEEeCCCCCHHHHHHHHhCCCEEE
Confidence 57999999999999999999999999999999986431 00 0011 11245689999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCC-CCCCCchHHHHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDES-SPSGNDYLAEVC 169 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~-~~~~~~y~~k~~ 169 (325)
|+++.... ..|+.++.+++++|++ .+ ++++|+ | + ||.....+ +.. .+..+.|.+|..
T Consensus 82 ~~a~~~~~------------~~~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~~~~-~~~~~p~~~~y~sK~~ 140 (313)
T 1qyd_A 82 SALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLP-S---E--FGMDPDIM-EHALQPGSITFIDKRK 140 (313)
T ss_dssp ECCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEEC-S---C--CSSCTTSC-CCCCSSTTHHHHHHHH
T ss_pred ECCccccc------------hhhHHHHHHHHHHHHh--cCCCceEEe-c---C--CcCCcccc-ccCCCCCcchHHHHHH
Confidence 99986421 1368889999999999 67 888875 3 2 55332221 111 111234545544
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCC-CC
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-YR 245 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~ 245 (325)
.|... ++.+++++++||+.++|+....+..... .....+.. .++++..+++++++|+|++++.+++++. .+
T Consensus 141 ~e~~~----~~~g~~~~ilrp~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~~~ 215 (313)
T 1qyd_A 141 VRRAI----EAASIPYTYVSSNMFAGYFAGSLAQLDG-HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLN 215 (313)
T ss_dssp HHHHH----HHTTCCBCEEECCEEHHHHTTTSSCTTC-CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSS
T ss_pred HHHHH----HhcCCCeEEEEeceeccccccccccccc-cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcccCC
Confidence 43332 3468999999999998853211111000 00011111 2567788999999999999999998875 34
Q ss_pred ceEEeeCC-CCCCHHHHHHHHHHHhCCCC-CCCccH
Q 020476 246 GVINGTAP-NPVRLAEMCDHLGNVLGRPS-WLPVPE 279 (325)
Q Consensus 246 ~~~~~~~~-~~~s~~e~~~~i~~~~g~~~-~~~~~~ 279 (325)
++|++.++ +.+|+.|+++.+.+.+|++. ...+|.
T Consensus 216 ~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~ 251 (313)
T 1qyd_A 216 KTMYIRPPMNILSQKEVIQIWERLSEQNLDKIYISS 251 (313)
T ss_dssp SEEECCCGGGEEEHHHHHHHHHHHHTCCCEECCBCS
T ss_pred ceEEEeCCCCccCHHHHHHHHHHhcCCCCceEECCH
Confidence 57888764 68999999999999999873 234443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=1.3e-26 Score=192.59 Aligned_cols=215 Identities=14% Similarity=0.084 Sum_probs=153.7
Q ss_pred HHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCC
Q 020476 10 LTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 10 ~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 87 (325)
..|...+.+++|+|+||||+|+||++++++|+++|+ +|++++|++++....... ......+|+.|++.+.++++++
T Consensus 8 ~~~~~~~~m~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~d~~~~~~~~~~~ 85 (242)
T 2bka_A 8 SKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYK--NVNQEVVDFEKLDDYASAFQGH 85 (242)
T ss_dssp HHHHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGG--GCEEEECCGGGGGGGGGGGSSC
T ss_pred HHHHhhhhhcCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccccC--CceEEecCcCCHHHHHHHhcCC
Confidence 334444444567999999999999999999999999 999999987654322111 1124467999999999999999
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|+||||||... ....++..+++|+.++.++++++++ .+.+++|++||.++ |+. +...| .+
T Consensus 86 d~vi~~ag~~~----~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~iv~~SS~~~--~~~-----------~~~~Y~~s 146 (242)
T 2bka_A 86 DVGFCCLGTTR----GKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKS-----------SNFLYLQV 146 (242)
T ss_dssp SEEEECCCCCH----HHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTT-----------CSSHHHHH
T ss_pred CEEEECCCccc----ccCCcccceeeeHHHHHHHHHHHHH--CCCCEEEEEccCcC--CCC-----------CcchHHHH
Confidence 99999999631 1234567889999999999999998 67889999999987 652 23456 56
Q ss_pred HHHHHHHHHHHhhcCCc-eEEEEEeceEEcCCCCcccchHHHH-H-HHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~-~~~ilRp~~i~g~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|...+.... ..++ +++++||+.++|+.... .....+ . .....+... ....+++++|+|++++.+++++.
T Consensus 147 K~~~e~~~~----~~~~~~~~~vrpg~v~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~dva~~~~~~~~~~~ 218 (242)
T 2bka_A 147 KGEVEAKVE----ELKFDRYSVFRPGVLLCDRQES--RPGEWLVRKFFGSLPDSW--ASGHSVPVVTVVRAMLNNVVRPR 218 (242)
T ss_dssp HHHHHHHHH----TTCCSEEEEEECCEEECTTGGG--SHHHHHHHHHHCSCCTTG--GGGTEEEHHHHHHHHHHHHTSCC
T ss_pred HHHHHHHHH----hcCCCCeEEEcCceecCCCCCC--cHHHHHHHHhhcccCccc--cCCcccCHHHHHHHHHHHHhCcc
Confidence 654444432 3467 69999999999996422 111111 1 111222111 12358999999999999999887
Q ss_pred CCceEEeeCC
Q 020476 244 YRGVINGTAP 253 (325)
Q Consensus 244 ~~~~~~~~~~ 253 (325)
..+.|++.++
T Consensus 219 ~~~~~~~~~~ 228 (242)
T 2bka_A 219 DKQMELLENK 228 (242)
T ss_dssp CSSEEEEEHH
T ss_pred ccCeeEeeHH
Confidence 7677766543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.5e-26 Score=186.07 Aligned_cols=199 Identities=15% Similarity=0.111 Sum_probs=143.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGT 100 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~~ 100 (325)
|+|+||||||+||++++++|+++|++|++++|++++....... ...+..+|+.|++.+.++++++|+|||+|+.....
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~ 81 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPR--PAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL 81 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCC--CSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccccCC--ceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCC
Confidence 7999999999999999999999999999999987654332111 11244678899999999999999999999964321
Q ss_pred CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhh
Q 020476 101 RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKV 179 (325)
Q Consensus 101 ~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~ 179 (325)
. ..++|+.++.++++++++ .+++++|++||.++ |+.....+. +...| .+|...|... +
T Consensus 82 ~--------~~~~n~~~~~~~~~~~~~--~~~~~~v~~Ss~~~--~~~~~~~~~-----~~~~y~~~K~~~e~~~----~ 140 (206)
T 1hdo_A 82 S--------PTTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVPP-----RLQAVTDDHIRMHKVL----R 140 (206)
T ss_dssp S--------CCCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSCG-----GGHHHHHHHHHHHHHH----H
T ss_pred C--------ccchHHHHHHHHHHHHHH--hCCCeEEEEeeeee--ccCcccccc-----cchhHHHHHHHHHHHH----H
Confidence 1 124789999999999998 67889999999988 765432211 22345 4554444333 3
Q ss_pred cCCceEEEEEeceEEcCC-CCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCC
Q 020476 180 NKDVRLALIRIGIVLGKD-GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPN 254 (325)
Q Consensus 180 ~~~~~~~ilRp~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~ 254 (325)
..+++++++||+.+.... ...+... ..+ .+. .++++++|+|++++.+++++.. +++|+++++.
T Consensus 141 ~~~i~~~~lrp~~~~~~~~~~~~~~~------~~~----~~~--~~~i~~~Dva~~~~~~~~~~~~~g~~~~i~~g~ 205 (206)
T 1hdo_A 141 ESGLKYVAVMPPHIGDQPLTGAYTVT------LDG----RGP--SRVISKHDLGHFMLRCLTTDEYDGHSTYPSHQY 205 (206)
T ss_dssp HTCSEEEEECCSEEECCCCCSCCEEE------SSS----CSS--CSEEEHHHHHHHHHHTTSCSTTTTCEEEEECCC
T ss_pred hCCCCEEEEeCCcccCCCCCcceEec------ccC----CCC--CCccCHHHHHHHHHHHhcCccccccceeeeccc
Confidence 368999999999983221 1111100 001 111 4799999999999999998764 4599999874
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=2.7e-27 Score=207.03 Aligned_cols=221 Identities=15% Similarity=0.149 Sum_probs=159.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCcee-ecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d-~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+|+|+|||||||||+++++.|+++|++|++++|++++. ..+.... ......+| +.|++++.++++++|+|||+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~~~~-~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~ 83 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIP-NVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 83 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTST-TEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHhhcC-CcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence 57999999999999999999999999999999987653 1111100 01134578 88999999999999999999874
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEG 174 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~ 174 (325)
.. . +.|..+ ++++++|++ .+ ++++||+||.....|+. ++...| .+|...|...
T Consensus 84 ~~-----~-------~~~~~~-~~l~~aa~~--~g~v~~~V~~SS~~~~~~~~----------~~~~~y~~sK~~~E~~~ 138 (352)
T 1xgk_A 84 QA-----G-------DEIAIG-KDLADAAKR--AGTIQHYIYSSMPDHSLYGP----------WPAVPMWAPKFTVENYV 138 (352)
T ss_dssp TT-----S-------CHHHHH-HHHHHHHHH--HSCCSEEEEEECCCGGGTSS----------CCCCTTTHHHHHHHHHH
T ss_pred CC-----c-------HHHHHH-HHHHHHHHH--cCCccEEEEeCCccccccCC----------CCCccHHHHHHHHHHHH
Confidence 21 1 236666 999999998 67 89999999986322432 122345 6776555444
Q ss_pred HHHhhcCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCC----CCCCcceeeeccH-HHHHHHHHHHHcCCC---CC
Q 020476 175 TALKVNKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGP----LGSGQQWFSWIHL-DDIVNLIYEALSNPS---YR 245 (325)
Q Consensus 175 ~~~~~~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~v~v-~D~a~a~~~~~~~~~---~~ 245 (325)
. ..+++++++||+ +||++.... ..++.......+.. .++++..++++++ +|+|++++.+++++. .+
T Consensus 139 ~----~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~g 213 (352)
T 1xgk_A 139 R----QLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG 213 (352)
T ss_dssp H----TSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred H----HcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhCC
Confidence 3 248999999987 688754211 11110000122332 2457788999999 899999999998752 46
Q ss_pred ceEEeeCCCCCCHHHHHHHHHHHhCCC
Q 020476 246 GVINGTAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 246 ~~~~~~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
++||+++ +.+|+.|+++.+.+.+|++
T Consensus 214 ~~~~l~~-~~~s~~e~~~~i~~~~G~~ 239 (352)
T 1xgk_A 214 HRIALTF-ETLSPVQVCAAFSRALNRR 239 (352)
T ss_dssp CEEEECS-EEECHHHHHHHHHHHHTSC
T ss_pred eEEEEec-CCCCHHHHHHHHHHHHCCC
Confidence 7999996 5799999999999999986
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.5e-25 Score=185.37 Aligned_cols=204 Identities=12% Similarity=0.113 Sum_probs=136.5
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
++++||+||||||+|+||++++++|+++| ++|++++|++++........ .....+|+.|++++.++++++|+|||+|
T Consensus 19 ~~~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~--~~~~~~Dl~d~~~~~~~~~~~D~vv~~a 96 (236)
T 3qvo_A 19 FQGHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN--SQIIMGDVLNHAALKQAMQGQDIVYANL 96 (236)
T ss_dssp ---CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT--EEEEECCTTCHHHHHHHHTTCSEEEEEC
T ss_pred ecCcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC--cEEEEecCCCHHHHHHHhcCCCEEEEcC
Confidence 34556789999999999999999999999 89999999887654433211 1245679999999999999999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc-hHHHHHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND-YLAEVCREWE 173 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~-y~~k~~~~~~ 173 (325)
+.. .. ...+.++++++++ .+++++|++||.++ |+................ +..+...+..
T Consensus 97 ~~~-----~~----------~~~~~~~~~~~~~--~~~~~iV~iSS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (236)
T 3qvo_A 97 TGE-----DL----------DIQANSVIAAMKA--CDVKRLIFVLSLGI--YDEVPGKFVEWNNAVIGEPLKPFRRAADA 157 (236)
T ss_dssp CST-----TH----------HHHHHHHHHHHHH--TTCCEEEEECCCCC------------------CGGGHHHHHHHHH
T ss_pred CCC-----ch----------hHHHHHHHHHHHH--cCCCEEEEEeccee--cCCCCcccccchhhcccchHHHHHHHHHH
Confidence 842 00 1346689999998 78899999999988 775544322221111122 2223222222
Q ss_pred HHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCceEEee
Q 020476 174 GTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGT 251 (325)
Q Consensus 174 ~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~~~~ 251 (325)
....+++++++||+.++++........ ..+. .....+++.+|+|++++.+++++. .+++|+++
T Consensus 158 ----l~~~gi~~~~vrPg~i~~~~~~~~~~~------~~~~-----~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~ 222 (236)
T 3qvo_A 158 ----IEASGLEYTILRPAWLTDEDIIDYELT------SRNE-----PFKGTIVSRKSVAALITDIIDKPEKHIGENIGIN 222 (236)
T ss_dssp ----HHTSCSEEEEEEECEEECCSCCCCEEE------CTTS-----CCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEE
T ss_pred ----HHHCCCCEEEEeCCcccCCCCcceEEe------ccCC-----CCCCcEECHHHHHHHHHHHHcCcccccCeeEEec
Confidence 234699999999999998754221110 0011 112358999999999999999876 55699999
Q ss_pred CCCC
Q 020476 252 APNP 255 (325)
Q Consensus 252 ~~~~ 255 (325)
++..
T Consensus 223 ~~~~ 226 (236)
T 3qvo_A 223 QPGT 226 (236)
T ss_dssp CSSC
T ss_pred CCCC
Confidence 8763
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=197.37 Aligned_cols=223 Identities=13% Similarity=0.134 Sum_probs=156.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-Cc-----ccccCC-CCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SK-----AELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~-----~~~~~~-~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
+||+|+||||||+||++++++|+++|++|++++|++ +. ...+.. .........+|+.|++++.++++++|+||
T Consensus 3 ~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi 82 (321)
T 3c1o_A 3 HMEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVI 82 (321)
T ss_dssp -CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred cccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEE
Confidence 467999999999999999999999999999999986 21 110000 00001245679999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCC---CchHHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYLAE 167 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~---~~y~~k 167 (325)
|+|+.. ++.++.+++++|++ .+ ++++|+ | + ||... +|..+.. +.|.+|
T Consensus 83 ~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~--S--~--~g~~~----~~~~~~~p~~~~y~sK 134 (321)
T 3c1o_A 83 SALPFP----------------MISSQIHIINAIKA--AGNIKRFLP--S--D--FGCEE----DRIKPLPPFESVLEKK 134 (321)
T ss_dssp ECCCGG----------------GSGGGHHHHHHHHH--HCCCCEEEC--S--C--CSSCG----GGCCCCHHHHHHHHHH
T ss_pred ECCCcc----------------chhhHHHHHHHHHH--hCCccEEec--c--c--cccCc----cccccCCCcchHHHHH
Confidence 999842 15677899999998 67 888872 2 2 55322 2222222 234444
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-H----HHcCCC---CCCCcceeeeccHHHHHHHHHHHH
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-M----MFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~----~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
...|... +..+++++++||+.+++.. .+.+ . ...+.. .++++..+++++++|+|++++.++
T Consensus 135 ~~~e~~~----~~~~~~~~~lrp~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l 203 (321)
T 3c1o_A 135 RIIRRAI----EAAALPYTYVSANCFGAYF-------VNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVA 203 (321)
T ss_dssp HHHHHHH----HHHTCCBEEEECCEEHHHH-------HHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHH----HHcCCCeEEEEeceecccc-------ccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHH
Confidence 4333322 2358999999999888752 1111 1 012222 256788899999999999999999
Q ss_pred cCCCC-CceEEeeC-CCCCCHHHHHHHHHHHhCCCCC-CCccHH
Q 020476 240 SNPSY-RGVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEF 280 (325)
Q Consensus 240 ~~~~~-~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~-~~~~~~ 280 (325)
.++.. +++|++.+ ++.+|+.|+++.+.+.+|++.. ..+|..
T Consensus 204 ~~~~~~g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~~~~~~~ 247 (321)
T 3c1o_A 204 CDPRCCNRIVIYRPPKNIISQNELISLWEAKSGLSFKKVHMPDE 247 (321)
T ss_dssp HCGGGTTEEEECCCGGGEEEHHHHHHHHHHHHTSCCCEEEECHH
T ss_pred hCccccCeEEEEeCCCCcccHHHHHHHHHHHcCCcceeeeCCHH
Confidence 88763 45788876 4789999999999999998743 344433
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-26 Score=199.36 Aligned_cols=225 Identities=17% Similarity=0.227 Sum_probs=156.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc---c------ccCCCCCccccCceeecCCchhHhhhCCCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA---E------LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~---~------~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
||+|+||||||+||+++++.|+++|++|++++|+.+.. . .+... ......+|+.|++.+.++++++|+|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~--~v~~v~~D~~d~~~l~~~~~~~d~v 81 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKAS--GANIVHGSIDDHASLVEAVKNVDVV 81 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTT--TCEEECCCTTCHHHHHHHHHTCSEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhC--CCEEEEeccCCHHHHHHHHcCCCEE
Confidence 57999999999999999999999999999999986432 0 00011 1124567999999999999999999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC---chHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN---DYLA 166 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~---~y~~ 166 (325)
||+++.. ++.++.+++++|++ .+ ++++|+ |+ ||... +|..+..+ .|.+
T Consensus 82 i~~a~~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S~-----~g~~~----~~~~~~~p~~~~y~s 133 (308)
T 1qyc_A 82 ISTVGSL----------------QIESQVNIIKAIKE--VGTVKRFFP-SE-----FGNDV----DNVHAVEPAKSVFEV 133 (308)
T ss_dssp EECCCGG----------------GSGGGHHHHHHHHH--HCCCSEEEC-SC-----CSSCT----TSCCCCTTHHHHHHH
T ss_pred EECCcch----------------hhhhHHHHHHHHHh--cCCCceEee-cc-----cccCc----cccccCCcchhHHHH
Confidence 9999842 25567899999998 66 888874 32 54322 22233222 3444
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|...+... +..+++++++||+.++|.......... .....+.. .++++..+++++++|+|++++.+++++.
T Consensus 134 K~~~e~~~----~~~~~~~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~ 207 (308)
T 1qyc_A 134 KAKVRRAI----EAEGIPYTYVSSNCFAGYFLRSLAQAG--LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR 207 (308)
T ss_dssp HHHHHHHH----HHHTCCBEEEECCEEHHHHTTTTTCTT--CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG
T ss_pred HHHHHHHH----HhcCCCeEEEEeceecccccccccccc--ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc
Confidence 44333322 235899999999999885322111100 00011112 2567888999999999999999998765
Q ss_pred -CCceEEeeCC-CCCCHHHHHHHHHHHhCCCCC-CCccHH
Q 020476 244 -YRGVINGTAP-NPVRLAEMCDHLGNVLGRPSW-LPVPEF 280 (325)
Q Consensus 244 -~~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~~-~~~~~~ 280 (325)
.+++|++.++ +.+|+.|+++.+.+.+|++.. ..+|..
T Consensus 208 ~~~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 247 (308)
T 1qyc_A 208 TLNKTLYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEE 247 (308)
T ss_dssp GTTEEEECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHH
T ss_pred ccCeEEEEeCCCCccCHHHHHHHHHHHhCCCCceEeCCHH
Confidence 3457888764 689999999999999998743 344433
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.5e-26 Score=196.73 Aligned_cols=227 Identities=19% Similarity=0.163 Sum_probs=155.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-------cccccCC-CCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-------KAELIFP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-------~~~~~~~-~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
||+|+||||||+||++++++|+++|++|++++|+++ +...+.. .........+|+.|++.+.++++++|+||
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi 81 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI 81 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence 579999999999999999999999999999999861 1110000 00001245679999999999999999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC---chHHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN---DYLAE 167 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~---~y~~k 167 (325)
|+|+... +.++.+++++|++ .+ ++++|+ | + ||... ++..+..+ .|.+|
T Consensus 82 ~~a~~~~----------------~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y~sK 133 (307)
T 2gas_A 82 CAAGRLL----------------IEDQVKIIKAIKE--AGNVKKFFP-S---E--FGLDV----DRHDAVEPVRQVFEEK 133 (307)
T ss_dssp ECSSSSC----------------GGGHHHHHHHHHH--HCCCSEEEC-S---C--CSSCT----TSCCCCTTHHHHHHHH
T ss_pred ECCcccc----------------cccHHHHHHHHHh--cCCceEEee-c---c--cccCc----ccccCCCcchhHHHHH
Confidence 9998531 4567899999998 66 888873 2 2 55322 22222222 34444
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
...+... +..+++++++||+.+++.....+.... ........ .++++..+++++++|+|++++.++.++..
T Consensus 134 ~~~e~~~----~~~~i~~~~lrp~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~ 207 (307)
T 2gas_A 134 ASIRRVI----EAEGVPYTYLCCHAFTGYFLRNLAQLD--ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT 207 (307)
T ss_dssp HHHHHHH----HHHTCCBEEEECCEETTTTGGGTTCTT--CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG
T ss_pred HHHHHHH----HHcCCCeEEEEcceeeccccccccccc--cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc
Confidence 4333322 335899999999998876421111100 00011111 25677889999999999999999988653
Q ss_pred -CceEEeeCC-CCCCHHHHHHHHHHHhCCCCC-CCccHH
Q 020476 245 -RGVINGTAP-NPVRLAEMCDHLGNVLGRPSW-LPVPEF 280 (325)
Q Consensus 245 -~~~~~~~~~-~~~s~~e~~~~i~~~~g~~~~-~~~~~~ 280 (325)
+++|++.++ +.+|+.|+++.+.+.+|++.. ..+|..
T Consensus 208 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~ 246 (307)
T 2gas_A 208 LNKAVHIRLPKNYLTQNEVIALWEKKIGKTLEKTYVSEE 246 (307)
T ss_dssp TTEEEECCCGGGEEEHHHHHHHHHHHHTSCCEEEEECHH
T ss_pred cCceEEEeCCCCcCCHHHHHHHHHHHhCCCCceeecCHH
Confidence 457888764 689999999999999998733 344433
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=192.65 Aligned_cols=221 Identities=17% Similarity=0.196 Sum_probs=155.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc---CCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI---FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~---~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+++|+||||||+||+++++.|+++|++|++++|+++. ...+ .... .....+|+.|++++.++++++|+|||+++
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~--v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~ 88 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLG--AIIVKGELDEHEKLVELMKKVDVVISALA 88 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTT--CEEEECCTTCHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCC--CEEEEecCCCHHHHHHHHcCCCEEEECCc
Confidence 4589999999999999999999999999999998752 1111 0000 12456799999999999999999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCC---CchHHHHHHH
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSG---NDYLAEVCRE 171 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~---~~y~~k~~~~ 171 (325)
.. ++.++.+++++|++ .+ ++++|+ | + ||... +|..+.. +.|.+|...|
T Consensus 89 ~~----------------~~~~~~~l~~aa~~--~g~v~~~v~-S---~--~g~~~----~~~~~~~p~~~~y~sK~~~e 140 (318)
T 2r6j_A 89 FP----------------QILDQFKILEAIKV--AGNIKRFLP-S---D--FGVEE----DRINALPPFEALIERKRMIR 140 (318)
T ss_dssp GG----------------GSTTHHHHHHHHHH--HCCCCEEEC-S---C--CSSCT----TTCCCCHHHHHHHHHHHHHH
T ss_pred hh----------------hhHHHHHHHHHHHh--cCCCCEEEe-e---c--cccCc----ccccCCCCcchhHHHHHHHH
Confidence 42 15567899999998 66 888874 3 2 55321 2222222 2344444333
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HH-HcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCC-CC
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MM-FAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPS-YR 245 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~-~~ 245 (325)
.. .+..+++++++||+.+++. +.+.+ .. ..+.. .++++..+++++++|++++++.++.++. .+
T Consensus 141 ~~----~~~~~~~~~~lr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~~~ 209 (318)
T 2r6j_A 141 RA----IEEANIPYTYVSANCFASY-------FINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRALN 209 (318)
T ss_dssp HH----HHHTTCCBEEEECCEEHHH-------HHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGGTT
T ss_pred HH----HHhcCCCeEEEEcceehhh-------hhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccccC
Confidence 22 2346899999999987764 12221 11 12222 2567789999999999999999998865 34
Q ss_pred ceEEeeC-CCCCCHHHHHHHHHHHhCCCCC-CCccHHH
Q 020476 246 GVINGTA-PNPVRLAEMCDHLGNVLGRPSW-LPVPEFA 281 (325)
Q Consensus 246 ~~~~~~~-~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~ 281 (325)
++|++.+ ++.+|+.|+++.+.+.+|++.. ..+|...
T Consensus 210 ~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~~~~~~~~ 247 (318)
T 2r6j_A 210 RVVIYRPSTNIITQLELISRWEKKIGKKFKKIHVPEEE 247 (318)
T ss_dssp EEEECCCGGGEEEHHHHHHHHHHHHTCCCEEEEECHHH
T ss_pred eEEEecCCCCccCHHHHHHHHHHHhCCCCceeecCHHH
Confidence 5788875 4789999999999999998743 3444443
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.5e-26 Score=190.80 Aligned_cols=220 Identities=15% Similarity=0.052 Sum_probs=154.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC----CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d~vi~~a~ 95 (325)
||+|+||||+|+||++++++|+++|++|++++|++++... ...+|+.|.+.+.++++ ++|+||||||
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~~~~D~~~~~~~~~~~~~~~~~~d~vi~~Ag 71 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---------DLSTPGGRETAVAAVLDRCGGVLDGLVCCAG 71 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---------cccCCcccHHHHHHHHHHcCCCccEEEECCC
Confidence 4689999999999999999999999999999998765432 13478888888888775 8999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCc-eecC-------C--------
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETE-VFDE-------S-------- 157 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~-~~~e-------~-------- 157 (325)
.... ...+...+++|+.++.++++++.+. ..+.+++|++||..+ |+..... +..| +
T Consensus 72 ~~~~----~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T 2dkn_A 72 VGVT----AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA--TQPGAAELPMVEAMLAGDEARAIELAEQ 145 (255)
T ss_dssp CCTT----SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSTTGGGCHHHHHHHHTCHHHHHHHHHH
T ss_pred CCCc----chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc--ccccccccchhhhhcccchhhhhhhccc
Confidence 6521 2346788999999999999976542 135689999999988 6543211 1111 0
Q ss_pred -CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cc-hHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 158 -SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 158 -~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
.++...| .+|...+.....+..+ .+++++++||+.++|+..... .. ... ..... .. + ...++++++|
T Consensus 146 ~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~--~~~~~--~~-~-~~~~~~~~~d 219 (255)
T 2dkn_A 146 QGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYG--ESTRR--FV-A-PLGRGSEPRE 219 (255)
T ss_dssp HCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTH--HHHHS--CC-C-TTSSCBCHHH
T ss_pred cCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhH--HHHHH--HH-H-HhcCCCCHHH
Confidence 1223456 6777777666665544 589999999999998742110 00 000 00000 01 1 3356899999
Q ss_pred HHHHHHHHHcCC--C-CCceEEeeCCCCCCHHH
Q 020476 231 IVNLIYEALSNP--S-YRGVINGTAPNPVRLAE 260 (325)
Q Consensus 231 ~a~a~~~~~~~~--~-~~~~~~~~~~~~~s~~e 260 (325)
+|++++.+++++ . .+.+|++.++..++++|
T Consensus 220 va~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e 252 (255)
T 2dkn_A 220 VAEAIAFLLGPQASFIHGSVLFVDGGMDALMRA 252 (255)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTHHHHHCT
T ss_pred HHHHHHHHhCCCcccceeeEEEecCCeEeeeec
Confidence 999999999875 2 34599999987665543
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-25 Score=189.91 Aligned_cols=239 Identities=14% Similarity=0.011 Sum_probs=167.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++++++||||+|+||++++++|+++|++|++++|+.++....... .....+..+|+.|.+++.++++ ++|
T Consensus 2 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (281)
T 3m1a_A 2 SESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVD 81 (281)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCC
Confidence 34567999999999999999999999999999999987654332211 0111244689999988887765 789
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||||||.... .....+.+...+++|+.+ ++.+++.+++ .+.+++|++||... +.. .+..
T Consensus 82 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~~sS~~~--~~~---------~~~~ 148 (281)
T 3m1a_A 82 VLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRE--RGSGSVVNISSFGG--QLS---------FAGF 148 (281)
T ss_dssp EEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TCC---------CTTC
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCEEEEEcCccc--cCC---------CCCc
Confidence 99999997422 244567788899999999 6666666666 56789999999876 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--------ccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--------LAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
..| .+|...+.....+..+ .++++++++||.+.++.... ...+...... ...+........+.+++
T Consensus 149 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 226 (281)
T 3m1a_A 149 SAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGP--TRQLVQGSDGSQPGDPA 226 (281)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHH--HHHHHHC-----CBCHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHH--HHHHHhhccCCCCCCHH
Confidence 567 7888777777666655 68999999999998874211 1111111100 00111112234578899
Q ss_pred HHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhC
Q 020476 230 DIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g 270 (325)
|+|++++.+++++...+.|+++++......+....+.+.++
T Consensus 227 dva~a~~~~~~~~~~~~~~~l~s~~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 227 KAAAAIRLALDTEKTPLRLALGGDAVDFLTGHLDSVRAELT 267 (281)
T ss_dssp HHHHHHHHHHHSSSCCSEEEESHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCeEEecCchHHHHHHHHHHHHHHHHH
Confidence 99999999999988778999998877777777777766554
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=177.91 Aligned_cols=199 Identities=13% Similarity=0.121 Sum_probs=138.1
Q ss_pred CCeEEEECCCchHHHHHHHHHH-hCCCeEEEEecCCC-cccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|++|+||||+|+||++++++|+ +.|++|++++|+++ +...+...........+|+.|.+++.++++++|+|||+||..
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 3459999999999999999999 89999999999876 543321011111245679999999999999999999999842
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC-ch-HHHHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN-DY-LAEVCREWEGT 175 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~-~y-~~k~~~~~~~~ 175 (325)
|+. ++++++++++ .+.+++|++||.++ |+........+..+... .| .+|...+.+.
T Consensus 85 ----------------n~~-~~~~~~~~~~--~~~~~iv~iSs~~~--~~~~~~~~~~~~~~~~~~~y~~~K~~~e~~~- 142 (221)
T 3r6d_A 85 ----------------GSD-MASIVKALSR--XNIRRVIGVSMAGL--SGEFPVALEKWTFDNLPISYVQGERQARNVL- 142 (221)
T ss_dssp ----------------HHH-HHHHHHHHHH--TTCCEEEEEEETTT--TSCSCHHHHHHHHHTSCHHHHHHHHHHHHHH-
T ss_pred ----------------Chh-HHHHHHHHHh--cCCCeEEEEeecee--cCCCCcccccccccccccHHHHHHHHHHHHH-
Confidence 344 8899999998 78889999999987 66433221111111222 46 5555444433
Q ss_pred HHhhcCCceEEEEEeceEEcCC-CCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH--cCCC--CCceEEe
Q 020476 176 ALKVNKDVRLALIRIGIVLGKD-GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL--SNPS--YRGVING 250 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~--~~~~--~~~~~~~ 250 (325)
+..+++++++||+.++++. ....... ..+ ......+++.+|+|++++.++ +++. .++.+.+
T Consensus 143 ---~~~~i~~~~vrpg~v~~~~~~~~~~~~------~~~-----~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i 208 (221)
T 3r6d_A 143 ---RESNLNYTILRLTWLYNDPEXTDYELI------PEG-----AQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGV 208 (221)
T ss_dssp ---HHSCSEEEEEEECEEECCTTCCCCEEE------CTT-----SCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEE
T ss_pred ---HhCCCCEEEEechhhcCCCCCcceeec------cCC-----ccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeee
Confidence 2369999999999999883 2211100 000 111123899999999999999 7765 4457777
Q ss_pred eCCC
Q 020476 251 TAPN 254 (325)
Q Consensus 251 ~~~~ 254 (325)
.++.
T Consensus 209 ~~~~ 212 (221)
T 3r6d_A 209 GEPG 212 (221)
T ss_dssp ECTT
T ss_pred cCCC
Confidence 7654
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=182.76 Aligned_cols=237 Identities=10% Similarity=0.019 Sum_probs=167.0
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhC-------C
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
....++|+||||+|+||++++++|+++|++|++++|+........ .......+..+|+.|++++.++++ +
T Consensus 13 ~l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 92 (278)
T 2bgk_A 13 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGK 92 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 344578999999999999999999999999999999764432211 000011245689999998887775 7
Q ss_pred CCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+||||||.... .....+.+...+++|+.++.++++++.... .+.+++|++||... +.... .
T Consensus 93 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~~~--------~ 162 (278)
T 2bgk_A 93 LDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS--FTAGE--------G 162 (278)
T ss_dssp CCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG--TCCCT--------T
T ss_pred CCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccc--cCCCC--------C
Confidence 9999999996522 233456778899999999999888775420 24679999999877 54221 1
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-c---chHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A---KMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
....| .+|...+.....+..+ .+++++++||+.++++..... . .....+... .+ .....+++++|+
T Consensus 163 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~dv 236 (278)
T 2bgk_A 163 VSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQ--AA----NLKGTLLRAEDV 236 (278)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHH--TC----SSCSCCCCHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhc--cc----ccccccCCHHHH
Confidence 23457 6777776666555543 589999999999999864321 1 111111111 11 112358999999
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHh
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVL 269 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~ 269 (325)
|++++.++..+. .+.+|++.++..+++.|+++.+.+.+
T Consensus 237 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 237 ADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 999999997532 34499999999999999999887654
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-24 Score=177.78 Aligned_cols=222 Identities=15% Similarity=0.099 Sum_probs=156.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+....|+|+||||+|+||++++++|+++|++|++++|+++....... .........+|+.|++.+.++++
T Consensus 7 ~~~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 7 LRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 33445799999999999999999999999999999998654322110 01111234579999988887775
Q ss_pred -CCCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 -GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+||||||..... ....+.+...+++|+.++.++++++. + .+.+++|++||... +...
T Consensus 87 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~iv~~sS~~~--~~~~--------- 153 (255)
T 1fmc_A 87 GKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEK--NGGGVILTITSMAA--ENKN--------- 153 (255)
T ss_dssp SSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TCCC---------
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcchhh--cCCC---------
Confidence 899999999975332 34566788899999999988888774 3 35679999999876 4321
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--ccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .+++++++||+.++++.... ...+.. ....+.++ ..+.+++|+|
T Consensus 154 ~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva 225 (255)
T 1fmc_A 154 INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPI------RRLGQPQDIA 225 (255)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSS------CSCBCHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHH--HHHhcCCc------ccCCCHHHHH
Confidence 234467 6777777666555443 48999999999999873211 111111 22223332 3478999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCCCCH
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
++++.++..+. .+.+|++.+|...|+
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 226 NAALFLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred HHHHHHhCCccccCCCcEEEECCceeccC
Confidence 99999997542 344999999987764
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-22 Score=170.01 Aligned_cols=216 Identities=14% Similarity=0.047 Sum_probs=156.1
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
|....+++|||||+|+||+++++.|+++|++|++++|+........ .....+|+.|++++.++++ ++|
T Consensus 24 ~~~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-----~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 98 (260)
T 3un1_A 24 MRNQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSADPD-----IHTVAGDISKPETADRIVREGIERFGRID 98 (260)
T ss_dssp HHTTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSSTT-----EEEEESCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred hCcCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccCc-----eEEEEccCCCHHHHHHHHHHHHHHCCCCC
Confidence 4455678999999999999999999999999999999876533221 1245689999998887765 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||||||.... .+...+.++..+++|+.++.++++++ ++ .+.+++|++||... +.... .++.
T Consensus 99 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~~~-------~~~~ 167 (260)
T 3un1_A 99 SLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLK--QGSGHIVSITTSLV--DQPMV-------GMPS 167 (260)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCTTT--TSCBT-------TCCC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEEechhh--ccCCC-------CCcc
Confidence 99999997533 23456778889999999999998876 44 46679999999765 32111 1123
Q ss_pred Cch-HHHHHHHHHHHHHhhcC---CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+. |+++.+++||.++++.... .... ......| ...+.+++|+|++++.
T Consensus 168 ~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~--~~~~--~~~~~~p------~~r~~~~~dva~av~~ 237 (260)
T 3un1_A 168 ALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA--ETHS--TLAGLHP------VGRMGEIRDVVDAVLY 237 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG--GGHH--HHHTTST------TSSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH--HHHH--HHhccCC------CCCCcCHHHHHHHHHH
Confidence 456 67877777766666554 8999999999999985322 1111 1111222 2347889999999999
Q ss_pred HHcCCCCC-ceEEeeCCCCCC
Q 020476 238 ALSNPSYR-GVINGTAPNPVR 257 (325)
Q Consensus 238 ~~~~~~~~-~~~~~~~~~~~s 257 (325)
+....... .++++.+|...+
T Consensus 238 L~~~~~itG~~i~vdGG~~~~ 258 (260)
T 3un1_A 238 LEHAGFITGEILHVDGGQNAG 258 (260)
T ss_dssp HHHCTTCCSCEEEESTTGGGC
T ss_pred hcccCCCCCcEEEECCCeecc
Confidence 96655544 489999886543
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=168.43 Aligned_cols=190 Identities=13% Similarity=0.091 Sum_probs=142.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC---CCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~---~d~vi~~a~~ 96 (325)
+|||+||||+|+||++++++|+ +|++|++++|++. ...+|+.|++++.+++++ +|+|||+||.
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-------------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag~ 68 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-------------DVTVDITNIDSIKKMYEQVGKVDAIVSATGS 68 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-------------SEECCTTCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-------------ceeeecCCHHHHHHHHHHhCCCCEEEECCCC
Confidence 4699999999999999999999 9999999999864 234799999998888764 8999999996
Q ss_pred CCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHH
Q 020476 97 PIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREW 172 (325)
Q Consensus 97 ~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~ 172 (325)
... .....+.....+++|+.++.++++++.+.....+++|++||... +.. .+....| .+|...+.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~~~~~ 137 (202)
T 3d7l_A 69 ATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFTLTTGIMM--EDP---------IVQGASAAMANGAVTA 137 (202)
T ss_dssp CCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHHHH
T ss_pred CCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEEEEcchhh--cCC---------CCccHHHHHHHHHHHH
Confidence 432 22345667788899999999999999872111268999998765 321 1233457 77877777
Q ss_pred HHHHHhhc--CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe
Q 020476 173 EGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING 250 (325)
Q Consensus 173 ~~~~~~~~--~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~ 250 (325)
....+..+ .+++++++||+.++++... . . .....+++++++|+|++++.++.....+.+||+
T Consensus 138 ~~~~~~~e~~~gi~v~~v~pg~v~~~~~~--------~--~------~~~~~~~~~~~~dva~~~~~~~~~~~~G~~~~v 201 (202)
T 3d7l_A 138 FAKSAAIEMPRGIRINTVSPNVLEESWDK--------L--E------PFFEGFLPVPAAKVARAFEKSVFGAQTGESYQV 201 (202)
T ss_dssp HHHHHTTSCSTTCEEEEEEECCBGGGHHH--------H--G------GGSTTCCCBCHHHHHHHHHHHHHSCCCSCEEEE
T ss_pred HHHHHHHHccCCeEEEEEecCccCCchhh--------h--h------hhccccCCCCHHHHHHHHHHhhhccccCceEec
Confidence 77666654 4899999999999987320 0 0 111235689999999999998865544458876
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1.5e-23 Score=174.30 Aligned_cols=218 Identities=21% Similarity=0.134 Sum_probs=152.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
..|+++||||+|+||++++++|+++|++|++++|+++................+|+.|.+++.++++ ++|+|||+||
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 3579999999999999999999999999999999865432221100001133679999999988876 4899999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
.... .....+.+...+++|+.++.++++++.... .+ .+++|++||... +... +....| .+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~ 154 (244)
T 1cyd_A 86 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVTF---------PNLITYSSTKG 154 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCC---------TTBHHHHHHHH
T ss_pred ccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhh--cCCC---------CCcchhHHHHH
Confidence 6532 233456778899999999888888775420 13 578999999876 4421 223457 7787
Q ss_pred HHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 169 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
..+.....+..+ .+++++++||+.++++.... ...+.. ....+.+ .+++++++|+|++++.+++.+
T Consensus 155 a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 1cyd_A 155 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHP------LRKFAEVEDVVNSILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHST------TSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHH--HHHhcCC------ccCCCCHHHHHHHHHHHhCch
Confidence 777666665544 58999999999999874211 111111 1122222 256899999999999999764
Q ss_pred C---CCceEEeeCCCC
Q 020476 243 S---YRGVINGTAPNP 255 (325)
Q Consensus 243 ~---~~~~~~~~~~~~ 255 (325)
. .+..+++.++..
T Consensus 227 ~~~~~G~~~~v~gG~~ 242 (244)
T 1cyd_A 227 SASTSGGGILVDAGYL 242 (244)
T ss_dssp GTTCCSSEEEESTTGG
T ss_pred hhcccCCEEEECCCcc
Confidence 3 344888887753
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-23 Score=179.69 Aligned_cols=235 Identities=14% Similarity=0.031 Sum_probs=162.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..|+|+||||+|+||++++++|+++|++|++++|+.++....... .....+..+|+.|.+++.++++ +
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999986543221100 0111245689999988877664 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+.
T Consensus 105 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~ 173 (302)
T 1w6u_A 105 PNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYA--ETG---------SGF 173 (302)
T ss_dssp CSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHH--HHC---------CTT
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEccccc--ccC---------CCC
Confidence 6999999996422 23456778889999999998887776431 034578999999865 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-Cc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
...| .+|...+.....+..+ .+++++++|||.+++++. .. ..............+. ..+.+++|+|++
T Consensus 174 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~ 247 (302)
T 1w6u_A 174 VVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPC------GRLGTVEELANL 247 (302)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTT------SSCBCHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCc------CCCCCHHHHHHH
Confidence 4457 7787777766666554 689999999999998732 11 1111111122222222 247899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCCCHHHHHHHHHHHhC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~~i~~~~g 270 (325)
++.++..+. .+.+|++.+|..+++.++++.+.+..|
T Consensus 248 ~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 248 AAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred HHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 999997543 344999999988888888888877665
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.89 E-value=6.1e-24 Score=172.17 Aligned_cols=196 Identities=16% Similarity=0.124 Sum_probs=143.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~~~ 97 (325)
|+|+||||+|+||++++++|+++ +|++++|++++.......... .+..+|+.|++++.++++ ++|+|||+||..
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ag~~ 77 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEEAGPLDLLVHAVGKA 77 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHhcCCCCEEEECCCcC
Confidence 58999999999999999999988 999999986543322110000 256689999999998887 899999999975
Q ss_pred CCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHH
Q 020476 98 IGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE 173 (325)
Q Consensus 98 ~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~ 173 (325)
... ....+.+...+++|+.++.++++++++ .+.+++|++||... +... +....| .+|...+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~iv~~sS~~~--~~~~---------~~~~~Y~~sK~a~~~~ 144 (207)
T 2yut_A 78 GRASVREAGRDLVEEMLAAHLLTAAFVLKHARF--QKGARAVFFGAYPR--YVQV---------PGFAAYAAAKGALEAY 144 (207)
T ss_dssp CCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE--EEEEEEEEECCCHH--HHSS---------TTBHHHHHHHHHHHHH
T ss_pred CCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh--cCCcEEEEEcChhh--ccCC---------CCcchHHHHHHHHHHH
Confidence 332 234567788999999999999999976 56789999999877 4321 233457 677777766
Q ss_pred HHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEE
Q 020476 174 GTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 249 (325)
Q Consensus 174 ~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~ 249 (325)
...+..+ .+++++++||+.++++... . .+...+.+++++|+|++++.+++++....+++
T Consensus 145 ~~~~~~~~~~~gi~v~~v~pg~v~t~~~~-----------~------~~~~~~~~~~~~dva~~~~~~~~~~~~~~~~~ 206 (207)
T 2yut_A 145 LEAARKELLREGVHLVLVRLPAVATGLWA-----------P------LGGPPKGALSPEEAARKVLEGLFREPVPALLE 206 (207)
T ss_dssp HHHHHHHHHTTTCEEEEECCCCBCSGGGG-----------G------GTSCCTTCBCHHHHHHHHHHHHC--CCCSCCC
T ss_pred HHHHHHHHhhhCCEEEEEecCcccCCCcc-----------c------cCCCCCCCCCHHHHHHHHHHHHhCCCCccccc
Confidence 6655554 5899999999999887410 0 11223568999999999999998876544543
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=167.17 Aligned_cols=218 Identities=18% Similarity=0.131 Sum_probs=151.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
..++|+||||+|+||++++++|+++|++|++++|+.++...............+|+.|.+++.++++ ++|+|||+||
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag 85 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence 3468999999999999999999999999999999865433221100001133679999999988876 5899999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
.... .....+.+...+++|+.++.++++++.... .+ .+++|++||... +.. .+....| .+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~~~~~Y~~sK~ 154 (244)
T 3d3w_A 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRA---------VTNHSVYCSTKG 154 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred cCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhh--ccC---------CCCCchHHHHHH
Confidence 7532 223456778899999999888887765410 13 578999999876 431 1223457 7787
Q ss_pred HHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 169 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
..+.....+..+ .+++++++||+.++++.... ...... ......+ ...+++++|+|++++.+++++
T Consensus 155 a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~~~l~~~~ 226 (244)
T 3d3w_A 155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAK--TMLNRIP------LGKFAEVEHVVNAILFLLSDR 226 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHH--HHHHTCT------TCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHH--HHHhhCC------CCCCcCHHHHHHHHHHHcCcc
Confidence 777666655543 48999999999999874211 111111 1112222 235889999999999999754
Q ss_pred C---CCceEEeeCCCC
Q 020476 243 S---YRGVINGTAPNP 255 (325)
Q Consensus 243 ~---~~~~~~~~~~~~ 255 (325)
. .+.+|++.+|..
T Consensus 227 ~~~~~G~~~~v~gG~~ 242 (244)
T 3d3w_A 227 SGMTTGSTLPVEGGFW 242 (244)
T ss_dssp GTTCCSCEEEESTTGG
T ss_pred ccCCCCCEEEECCCcc
Confidence 2 344899988754
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.89 E-value=8.7e-22 Score=164.22 Aligned_cols=216 Identities=14% Similarity=0.045 Sum_probs=148.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++++||||+|+||++++++|+++|++|++++|+.++..... ..........+|+.|.+++.++++ ++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999865432211 101111234678999988887765 79
Q ss_pred CEEEECCCCCCCC------CCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 88 TAVVNLAGTPIGT------RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 88 d~vi~~a~~~~~~------~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
|+|||+||..... ....+.+...+++|+.++.++++++ ++ .+.+++|++||... +...
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~~-------- 149 (250)
T 2cfc_A 82 DVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLL--QGAGVIVNIASVAS--LVAF-------- 149 (250)
T ss_dssp CEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC--------
T ss_pred CEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--CCCCEEEEECChhh--ccCC--------
Confidence 9999999975322 2345678889999999987665554 44 35689999999876 3311
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .+++++++||+.++++........-... ......++ ..+.+.+|+|
T Consensus 150 -~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva 222 (250)
T 2cfc_A 150 -PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQ------KEIGTAAQVA 222 (250)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTT------CSCBCHHHHH
T ss_pred -CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCC------CCCcCHHHHH
Confidence 234467 6777776666555543 3899999999999998642200000111 12222222 2478999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++++.++..+. .+.++++.+|.
T Consensus 223 ~~~~~l~~~~~~~~~G~~~~v~gG~ 247 (250)
T 2cfc_A 223 DAVMFLAGEDATYVNGAALVMDGAY 247 (250)
T ss_dssp HHHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HHHHHHcCchhhcccCCEEEECCce
Confidence 99999998653 24488887764
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=169.49 Aligned_cols=234 Identities=15% Similarity=0.126 Sum_probs=148.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-------CCCCCccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+.++++||||+|+||+++++.|+++|++|++++|++++.... ...........+|+.|++++.++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 346899999999999999999999999999999986543221 1111111234579999988887776
Q ss_pred -CCCEEEECCCCCCCC---CC----ChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceec
Q 020476 86 -GSTAVVNLAGTPIGT---RW----SSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 86 -~~d~vi~~a~~~~~~---~~----~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++|+||||||..... .. ..+.++..+++|+.++.++++++.... .+ +++|++||......+
T Consensus 85 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~~-------- 155 (278)
T 1spx_A 85 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASGLHA-------- 155 (278)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSSSSC--------
T ss_pred CCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEecccccccC--------
Confidence 899999999964321 22 566788899999999999888776420 14 799999997541111
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc----cch---HHHH-HHHcCCCCCCCccee
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKM---IPLF-MMFAGGPLGSGQQWF 223 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~----~~~---~~~~-~~~~~~~~~~~~~~~ 223 (325)
.+....| .+|...+.....+..+ .|+++++++||.+.++..... ... .... ......|. .
T Consensus 156 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~ 227 (278)
T 1spx_A 156 --TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA------G 227 (278)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT------S
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC------c
Confidence 1233457 6777666655554432 589999999999998743211 011 0001 11111121 2
Q ss_pred eeccHHHHHHHHHHHHcCCC----CCceEEeeCCCCCCHHHHHHHHHHHh
Q 020476 224 SWIHLDDIVNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVL 269 (325)
Q Consensus 224 ~~v~v~D~a~a~~~~~~~~~----~~~~~~~~~~~~~s~~e~~~~i~~~~ 269 (325)
.+.+++|+|++++.++..+. .+.++++.+|..+++.++++.+.+.+
T Consensus 228 ~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 228 VMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred CCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 47899999999999987532 24489999999999999999988754
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.88 E-value=4e-22 Score=167.26 Aligned_cols=221 Identities=12% Similarity=0.060 Sum_probs=151.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++|+||||+|+||++++++|+++|++|++++|+.+....... ......+..+|+.|++++.++++ +
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGR 90 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 345689999999999999999999999999999998654322110 01111244689999988887765 7
Q ss_pred CCEEEECCCCCC-C---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+||||||... . .....+.+...+++|+.++.++++++... ..+.+++|++||... +..... .+
T Consensus 91 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~-------~~ 161 (260)
T 3awd_A 91 VDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSG--LIVNRP-------QQ 161 (260)
T ss_dssp CCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCSS-------SC
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchh--cccCCC-------CC
Confidence 999999999653 1 23355667888999999999988876531 024678999999765 321110 11
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
...| .+|...+.....+..+ .+++++++||+.++++... .... -... ....+.++ ..+++++|+|++
T Consensus 162 ~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~dva~~ 234 (260)
T 3awd_A 162 QAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEK-PELYDAWIAGTPM------GRVGQPDEVASV 234 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTC-HHHHHHHHHTCTT------SSCBCHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCC-hHHHHHHHhcCCc------CCCCCHHHHHHH
Confidence 2457 7787777666665554 6899999999999998643 1100 0111 12222232 247899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++.++..+. .+.+|++.+|.
T Consensus 235 ~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 235 VQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHhCchhccCCCcEEEECCce
Confidence 999997532 34488998875
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.5e-23 Score=175.64 Aligned_cols=238 Identities=21% Similarity=0.135 Sum_probs=167.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCC---ccccCceeecCCchhHhhhC-----
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~d~~~~~~~~~----- 85 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+...... .... ...+..+|+.|++++.++++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 34578999999999999999999999999999999875432211 1100 11244579999988877664
Q ss_pred --CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 --GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 --~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++|||||.... .....+.+...+++|+.++.++++++.... .+..++|++||... +...
T Consensus 89 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~-------- 158 (281)
T 3svt_A 89 HGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAA--SNTH-------- 158 (281)
T ss_dssp HSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHH--HSCC--------
T ss_pred cCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHH--cCCC--------
Confidence 68999999996211 344567788899999999988888764320 34468999999876 4321
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .++++..++||.+.++............ ......|+ ..+.+++|+|
T Consensus 159 -~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva 231 (281)
T 3svt_A 159 -RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPL------PRQGEVEDVA 231 (281)
T ss_dssp -TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSS------SSCBCHHHHH
T ss_pred -CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCC------CCCCCHHHHH
Confidence 234568 7787777766665553 4799999999999887421110000111 11222222 2467899999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCCCC-HHHHHHHHHHHhCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNPVR-LAEMCDHLGNVLGRP 272 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~~s-~~e~~~~i~~~~g~~ 272 (325)
++++.++.+.. .+.++++.+|..++ ..++.+.+.+.+|.+
T Consensus 232 ~~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~ 275 (281)
T 3svt_A 232 NMAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRD 275 (281)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTT
T ss_pred HHHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCc
Confidence 99999997643 34599999998776 888999999998865
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=2.2e-22 Score=169.08 Aligned_cols=222 Identities=12% Similarity=0.070 Sum_probs=152.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||+++++.|+++|++|++++|++++....... ........+|+.|++++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999986543221100 0011244679999988887765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +... +..
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~ 154 (263)
T 3ai3_A 86 ADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICA--VQPL---------WYE 154 (263)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCC---------TTC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--cCCC---------CCc
Confidence 9999999997532 23456678889999999988887776321 035679999999876 4321 234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cc--------hHHHH-HHHcC-CCCCCCcceeeec
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK--------MIPLF-MMFAG-GPLGSGQQWFSWI 226 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~--------~~~~~-~~~~~-~~~~~~~~~~~~v 226 (325)
..| .+|...+.....+..+ .+++++++|||.++++..... .. .-... ..... .| ...+.
T Consensus 155 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~ 228 (263)
T 3ai3_A 155 PIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAP------IKRFA 228 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCT------TCSCB
T ss_pred chHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCC------CCCCc
Confidence 467 6777766666555543 589999999999998742110 00 00001 11111 12 23478
Q ss_pred cHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+++|+|++++.++..+. .+.+|++.+|..+|
T Consensus 229 ~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~s 262 (263)
T 3ai3_A 229 SPEELANFFVFLCSERATYSVGSAYFVDGGMLKT 262 (263)
T ss_dssp CHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCCC
T ss_pred CHHHHHHHHHHHcCccccCCCCcEEEECCCcccc
Confidence 99999999999997643 34489999887655
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.88 E-value=5.1e-23 Score=172.50 Aligned_cols=227 Identities=12% Similarity=0.049 Sum_probs=155.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.+++|||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|++++.++++ ++|+||
T Consensus 8 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 87 (259)
T 4e6p_A 8 GKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDILV 87 (259)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999986553322111 0011245689999998887775 799999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||||.... ...+.+.++..+++|+.++.++++++.... ....++|++||... +.. .+....|
T Consensus 88 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~ 156 (259)
T 4e6p_A 88 NNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAG--RRG---------EALVAIYC 156 (259)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTBHHHH
T ss_pred ECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhh--ccC---------CCCChHHH
Confidence 99997532 234567788899999999999888775420 11468999999876 321 1223457
Q ss_pred HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC----CCCCcceeeeccHHHHHHHHHH
Q 020476 165 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP----LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.+|...+.....+..+ .++++..++||.++++...........+....... +.+......+.+++|+|++++.
T Consensus 157 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~ 236 (259)
T 4e6p_A 157 ATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIF 236 (259)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHH
Confidence 7787777666665543 48999999999999885321111111110000000 0122334568999999999999
Q ss_pred HHcCCC---CCceEEeeCCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~s 257 (325)
++.... .+.+|++.+|..+|
T Consensus 237 L~s~~~~~itG~~i~vdgG~~~s 259 (259)
T 4e6p_A 237 LASAESDYIVSQTYNVDGGNWMS 259 (259)
T ss_dssp TTSGGGTTCCSCEEEESTTSSCC
T ss_pred HhCCccCCCCCCEEEECcChhcC
Confidence 886543 34599999987654
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=4.7e-22 Score=164.99 Aligned_cols=212 Identities=18% Similarity=0.137 Sum_probs=149.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC------CCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~------~~d~vi~~ 93 (325)
+|+|+||||+|+||++++++|+++|++|++++|+++ .... .+..+|+.|++++.++++ ++|+|||+
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~~~~-------~~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ 73 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-GEDL-------IYVEGDVTREEDVRRAVARAQEEAPLFAVVSA 73 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-SSSS-------EEEECCTTCHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-ccce-------EEEeCCCCCHHHHHHHHHHHHhhCCceEEEEc
Confidence 478999999999999999999999999999999875 2111 255689999999888876 78999999
Q ss_pred CCCCCCCC-------CChhhHHHHHHHhhHHHHHHHHHHhcCC--CC------CCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 94 AGTPIGTR-------WSSEIKKEIKESRIRVTSKVVDLINESP--EG------VRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 94 a~~~~~~~-------~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~------~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
||...... ...+.+...+++|+.++.++++++.... .+ .+++|++||... +...
T Consensus 74 ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~--------- 142 (242)
T 1uay_A 74 AGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAA--FEGQ--------- 142 (242)
T ss_dssp CCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHH--HHCC---------
T ss_pred ccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhh--ccCC---------
Confidence 99753211 1123678899999999999998876421 11 128999999876 4321
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .+++++++|||.++++..... ..+.. ......++. ..+++++|+|+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~dva~ 215 (242)
T 1uay_A 143 IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKA--SLAAQVPFP-----PRLGRPEEYAA 215 (242)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHH--HHHTTCCSS-----CSCCCHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHH--HHHhhCCCc-----ccCCCHHHHHH
Confidence 234467 6776666555444433 489999999999998742111 11111 112222220 23789999999
Q ss_pred HHHHHHcCCCCCc-eEEeeCCCCCC
Q 020476 234 LIYEALSNPSYRG-VINGTAPNPVR 257 (325)
Q Consensus 234 a~~~~~~~~~~~~-~~~~~~~~~~s 257 (325)
+++.+++++...| .|++.+|..++
T Consensus 216 ~~~~l~~~~~~~G~~~~v~gG~~~~ 240 (242)
T 1uay_A 216 LVLHILENPMLNGEVVRLDGALRMA 240 (242)
T ss_dssp HHHHHHHCTTCCSCEEEESTTCCCC
T ss_pred HHHHHhcCCCCCCcEEEEcCCeecC
Confidence 9999998754444 89998887554
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.88 E-value=4.2e-22 Score=167.37 Aligned_cols=223 Identities=15% Similarity=0.054 Sum_probs=151.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
....|+++||||+|+||++++++|+++|++|++++|++++........ .......+|+.|.+++.++++ ++|
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD 88 (263)
T 3ak4_A 9 DLSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFD 88 (263)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCC
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 344578999999999999999999999999999999865433221110 011244689999998887776 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+||||||.... .....+.+...+++|+.++.++++++... ..+ .+++|++||... +.. .+...
T Consensus 89 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 157 (263)
T 3ak4_A 89 LLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAA--KVG---------APLLA 157 (263)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CTTCH
T ss_pred EEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEeccccc--ccC---------CCCch
Confidence 99999997532 23456678889999999998888776531 023 579999999865 321 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc----h-----HHHH-HHHcCCCCCCCcceeeeccH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK----M-----IPLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~----~-----~~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.| .+|...+.....+..+ .+++++++|||.++++....... . -... ......| ...+.++
T Consensus 158 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~ 231 (263)
T 3ak4_A 158 HYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTP------LGRIEEP 231 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCT------TCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCC------CCCCcCH
Confidence 67 6777666655554443 48999999999998763211000 0 0000 1111112 2348899
Q ss_pred HHHHHHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 229 DDIVNLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+|+|++++.++..+. .+.+|++.+|..+
T Consensus 232 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~ 262 (263)
T 3ak4_A 232 EDVADVVVFLASDAARFMTGQGINVTGGVRM 262 (263)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSSSSC
T ss_pred HHHHHHHHHHhCccccCCCCCEEEECcCEeC
Confidence 999999999997642 3448999888543
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.4e-22 Score=168.95 Aligned_cols=223 Identities=14% Similarity=0.056 Sum_probs=147.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----C-------CccccCceeecCCchhHhhhCC--
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K-------KTRFFPGVMIAEEPQWRDCIQG-- 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~-------~~~~~~~~d~~d~~~~~~~~~~-- 86 (325)
.++|+||||+|+||++++++|+++|++|++++|+.++....... . .......+|+.|.+.+.+++++
T Consensus 7 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 86 (264)
T 2pd6_A 7 SALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQVQ 86 (264)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999999999986543221110 0 1112345788898888777653
Q ss_pred -----C-CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCcee
Q 020476 87 -----S-TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 87 -----~-d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
+ |+||||||.... .....+.+...+++|+.++.++++++.... .+ .+++|++||.... ++.
T Consensus 87 ~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-~~~------ 159 (264)
T 2pd6_A 87 ACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGK-VGN------ 159 (264)
T ss_dssp HHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHH-HCC------
T ss_pred HHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhc-cCC------
Confidence 4 999999997532 234567788899999999999988876520 12 4689999997651 221
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHH
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|...+.....+..+ .+++++++||+.++++....... ... ......+ ...+.+++
T Consensus 160 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~------~~~~~~~~ 227 (264)
T 2pd6_A 160 ----VGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQ--KVVDKITEMIP------MGHLGDPE 227 (264)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC------------CTGGGCT------TCSCBCHH
T ss_pred ----CCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCH--HHHHHHHHhCC------CCCCCCHH
Confidence 223457 6777666665555444 58999999999999985322110 000 1111111 12478999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCCCCHHHH
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNPVRLAEM 261 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~~s~~e~ 261 (325)
|+|++++.++..+. .+..+++.+|..++...+
T Consensus 228 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~ 262 (264)
T 2pd6_A 228 DVADVVAFLASEDSGYITGTSVEVTGGLFMAENLY 262 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTC-------
T ss_pred HHHHHHHHHcCCcccCCCCCEEEECCCceeccccC
Confidence 99999999997532 344889998876665543
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=4.3e-21 Score=161.76 Aligned_cols=216 Identities=16% Similarity=0.056 Sum_probs=154.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356899999999999999999999999999999988664332111 1111244689999998887775 79999
Q ss_pred EECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 91 VNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 91 i~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+..
T Consensus 90 v~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~~ 156 (271)
T 3tzq_B 90 DNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLIS--AGGGAIVNISSATA--HAA---------YDMS 156 (271)
T ss_dssp EECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSB---------CSSC
T ss_pred EECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCHHH--cCC---------CCCC
Confidence 999997522 24466778899999999999998887 55 56679999999876 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .|+++..++||.++++...... .-... ......+. ..+.+.+|+|++++
T Consensus 157 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~------~r~~~p~dvA~~v~ 229 (271)
T 3tzq_B 157 TAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGL-PQPIVDIFATHHLA------GRIGEPHEIAELVC 229 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC----CHHHHHHHHTTSTT------SSCBCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccC-CHHHHHHHHhcCCC------CCCcCHHHHHHHHH
Confidence 467 7787777666666554 5899999999999998532110 01111 11222222 23678999999999
Q ss_pred HHHcCCC---CCceEEeeCCC
Q 020476 237 EALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~ 254 (325)
.++.+.. .+.++++.+|.
T Consensus 230 ~L~s~~~~~itG~~i~vdGG~ 250 (271)
T 3tzq_B 230 FLASDRAAFITGQVIAADSGL 250 (271)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHhCcccCCcCCCEEEECCCc
Confidence 9997643 34588888884
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.2e-21 Score=160.65 Aligned_cols=222 Identities=15% Similarity=0.073 Sum_probs=149.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||+++++.|+++|++|++++|+.+......... ....+..+|+.|.+++.++++ ++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3468999999999999999999999999999999887654433221 112245689999988887765 79999
Q ss_pred EECCCCCCCC-------CCChhhHHHHHHHhhHHHHHHHHHHhcCC-C-------CCCCEEEEeeeeeeeecCCCCceec
Q 020476 91 VNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINESP-E-------GVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 91 i~~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~-------~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
|||||..... ....+.+...+++|+.++.++++++.... . +..++|++||... +...
T Consensus 86 v~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~isS~~~--~~~~------ 157 (257)
T 3tpc_A 86 VNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNTASIAA--FDGQ------ 157 (257)
T ss_dssp EECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHCC------
T ss_pred EECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEEechhh--ccCC------
Confidence 9999975321 34467788999999999999988876421 1 3457999999876 3211
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
+....| .+|...+.....+..+ .|+++..++||.+.++.......-. ........++ ...+.+.+|+
T Consensus 158 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~-----~~r~~~~~dv 228 (257)
T 3tpc_A 158 ---IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDV-QDALAASVPF-----PPRLGRAEEY 228 (257)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC---------------CCSSS-----SCSCBCHHHH
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHH-HHHHHhcCCC-----CCCCCCHHHH
Confidence 234467 7777766665555544 5899999999999887432111000 0011111111 1347899999
Q ss_pred HHHHHHHHcCCCCCc-eEEeeCCCCCC
Q 020476 232 VNLIYEALSNPSYRG-VINGTAPNPVR 257 (325)
Q Consensus 232 a~a~~~~~~~~~~~~-~~~~~~~~~~s 257 (325)
|+++..+++.....| ++++.+|..++
T Consensus 229 a~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tpc_A 229 AALVKHICENTMLNGEVIRLDGALRMA 255 (257)
T ss_dssp HHHHHHHHHCTTCCSCEEEESTTCCC-
T ss_pred HHHHHHHcccCCcCCcEEEECCCccCC
Confidence 999999998755445 88888886554
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.87 E-value=3.7e-22 Score=168.03 Aligned_cols=220 Identities=12% Similarity=0.045 Sum_probs=139.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh--------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI-------- 84 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~-------- 84 (325)
....++|+||||+|+||++++++|+++|++|++++|++++...... .........+|+.|.+.+.+++
T Consensus 11 ~l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 11 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3445789999999999999999999999999999998654322110 0101123457888888887766
Q ss_pred CCCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 85 QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
.++|+|||+||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||... +..
T Consensus 91 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~--------- 157 (266)
T 1xq1_A 91 GKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKA--SGCGNIIFMSSIAG--VVS--------- 157 (266)
T ss_dssp TCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HSSCEEEEEC------------------
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEEccchh--ccC---------
Confidence 478999999997532 23456778889999999999998887 44 45689999999876 331
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.+....| .+|...+.....+..+ .+++++++||++++++...... ...+. ..+........+.+++|+|+
T Consensus 158 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~dva~ 231 (266)
T 1xq1_A 158 ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVY--DDEFK----KVVISRKPLGRFGEPEEVSS 231 (266)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhc--CHHHH----HHHHhcCCCCCCcCHHHHHH
Confidence 1234567 7777776666555443 4899999999999998532210 00000 00001111224789999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+++.++..+. .+.++++.+|..
T Consensus 232 ~~~~l~~~~~~~~~G~~~~v~gG~~ 256 (266)
T 1xq1_A 232 LVAFLCMPAASYITGQTICVDGGLT 256 (266)
T ss_dssp HHHHHTSGGGTTCCSCEEECCCCEE
T ss_pred HHHHHcCccccCccCcEEEEcCCcc
Confidence 9999987532 344888888754
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=3.6e-22 Score=166.36 Aligned_cols=216 Identities=17% Similarity=0.092 Sum_probs=146.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||++++++|+++|++|++++|++++....... ........+|+.|.+++.++++ +
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 346899999999999999999999999999999986543221100 0011134578889988887775 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+|||+||.... .....+.+...+++|+.++.+++++ +++ .+.+++|++||.... ++. +
T Consensus 86 ~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~iv~~sS~~~~-~~~----------~ 152 (248)
T 2pnf_A 86 IDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIK--QRWGRIVNISSVVGF-TGN----------V 152 (248)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHH--HTCEEEEEECCHHHH-HCC----------T
T ss_pred CCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCcEEEEEccHHhc-CCC----------C
Confidence 9999999997532 2345667788999999999666554 444 456799999997641 331 2
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .+++++++||+.++++.......... .......+. ..+++++|+|+++
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~-~~~~~~~~~------~~~~~~~dva~~~ 225 (248)
T 2pnf_A 153 GQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIK-QKYKEQIPL------GRFGSPEEVANVV 225 (248)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHH-HHHHHTCTT------SSCBCHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHH-HHHHhcCCC------CCccCHHHHHHHH
Confidence 23457 6776666555544432 48999999999999875322211110 011112222 3478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++.... .+.+|++.+|.
T Consensus 226 ~~l~~~~~~~~~G~~~~v~gg~ 247 (248)
T 2pnf_A 226 LFLCSELASYITGEVIHVNGGM 247 (248)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHhCchhhcCCCcEEEeCCCc
Confidence 99997532 34588888763
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=166.57 Aligned_cols=221 Identities=19% Similarity=0.137 Sum_probs=129.8
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-----
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.|....++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|++++.++++
T Consensus 4 ~~~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 83 (253)
T 3qiv_A 4 SMRFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAE 83 (253)
T ss_dssp -CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred ccccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 455556799999999999999999999999999999998755432211 01111244689999988887765
Q ss_pred --CCCEEEECCCCCCC------CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCce
Q 020476 86 --GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 86 --~~d~vi~~a~~~~~------~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
++|+||||||.... .....+.+...+++|+.++.++ +..+++ .+.+++|++||... +.
T Consensus 84 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~------ 153 (253)
T 3qiv_A 84 FGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTK--RGGGAIVNQSSTAA--WL------ 153 (253)
T ss_dssp HSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCEEEEEECC-------------
T ss_pred cCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHh--cCCCEEEEECCccc--cC------
Confidence 79999999997321 2345677888999999995555 444555 45678999999877 42
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
....| .+|...+.....+..+ .++++..++||.++++....... -.... .+........+.+++
T Consensus 154 ------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-----~~~~~~~~~~~~~~~ 221 (253)
T 3qiv_A 154 ------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTP-KEMVD-----DIVKGLPLSRMGTPD 221 (253)
T ss_dssp ------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------------CC
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCc-HHHHH-----HHhccCCCCCCCCHH
Confidence 23447 6777777666665554 38999999999999874321100 00000 011112223466789
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
|+|++++.++.... .+.+|++.+|..++
T Consensus 222 dva~~~~~l~s~~~~~~tG~~~~vdgG~~~~ 252 (253)
T 3qiv_A 222 DLVGMCLFLLSDEASWITGQIFNVDGGQIIR 252 (253)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEC-------
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCeecC
Confidence 99999999997543 35599999887543
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.87 E-value=7.2e-21 Score=158.55 Aligned_cols=219 Identities=16% Similarity=0.056 Sum_probs=142.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+... . . .....+|+.|++++.++++ ++|+|
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~-~-~----~~~~~~D~~d~~~~~~~~~~~~~~~g~id~l 78 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQ-Y-P----FATEVMDVADAAQVAQVCQRLLAETERLDAL 78 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSSC-C-S----SEEEECCTTCHHHHHHHHHHHHHHCSCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhhc-C-C----ceEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 34578999999999999999999999999999999865311 0 0 1244689999998887765 79999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+....
T Consensus 79 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~~~~ 145 (250)
T 2fwm_X 79 VNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRR--QRGGAIVTVASDAA--HTP---------RIGMSA 145 (250)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSC---------CTTCHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHh--cCCCEEEEECchhh--CCC---------CCCCch
Confidence 999997532 23356778899999999999988877 44 35689999999876 321 123445
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cchHH-HHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIP-LFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
| .+|...+.....+..+ .++++++++||.++++..... ..... .+... ............+.+.+|+|+++
T Consensus 146 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~p~dvA~~v 224 (250)
T 2fwm_X 146 YGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGF-GEQFKLGIPLGKIARPQEIANTI 224 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------------CHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhh-hhcccccCCCCCCcCHHHHHHHH
Confidence 7 6777666665555443 489999999999998742211 00000 00000 00000011123478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++..+. .+..+++.+|..+
T Consensus 225 ~~l~s~~~~~~tG~~i~vdGG~~~ 248 (250)
T 2fwm_X 225 LFLASDLASHITLQDIVVDGGSTL 248 (250)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHhCccccCCCCCEEEECCCccc
Confidence 99997642 3448888877543
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.4e-22 Score=165.21 Aligned_cols=223 Identities=12% Similarity=0.032 Sum_probs=152.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh-------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI------- 84 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~------- 84 (325)
|....++++||||+|+||++++++|+++|++|++++|+++....... .........+|+.|++++.+++
T Consensus 5 ~~l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 5 WNLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp TCCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 33445789999999999999999999999999999998654322110 0111123457999998887776
Q ss_pred -CCCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 85 -QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 85 -~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
.++|+|||+||.... .+...+.+...+++|+.++.++++++ ++ .+.+++|++||... +..
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~-------- 152 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA--SERGNVVFISSVSG--ALA-------- 152 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TSSEEEEEECCGGG--TSC--------
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcchhh--ccC--------
Confidence 469999999997532 23456678889999999999998877 34 45679999999875 321
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cchHHHH-HHHcCCCCCCCcceeeeccH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.+....| .+|...+.....+..+ .++++++++||.+.++..... ......+ ......+ ...+.++
T Consensus 153 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~ 225 (260)
T 2ae2_A 153 -VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCA------LRRMGEP 225 (260)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTST------TCSCBCH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCC------CCCCCCH
Confidence 1233467 7787777666655554 389999999999987631100 0011100 1111122 2347899
Q ss_pred HHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 229 DDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+|+|++++.++..+. .+.++++.+|...+
T Consensus 226 ~dvA~~v~~l~s~~~~~~tG~~~~vdgG~~~~ 257 (260)
T 2ae2_A 226 KELAAMVAFLCFPAASYVTGQIIYVDGGLMAN 257 (260)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHHHHcCccccCCCCCEEEECCCcccc
Confidence 999999999987532 34488888876443
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=162.51 Aligned_cols=214 Identities=15% Similarity=0.027 Sum_probs=151.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
...++++||||+|+||+++++.|+++|++|++++|+........ ...+|+.|.+.+.++++ ++|++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~~~~~~~~~~~~~g~iD~l 98 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-------HLPGDLREAAYADGLPGAVAAGLGRLDIV 98 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-------ECCCCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-------ccCcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 34568999999999999999999999999999999876543321 23578888887766553 79999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+....
T Consensus 99 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~~~~ 165 (266)
T 3uxy_A 99 VNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAA--AGGGAIVNVASCWG--LRP---------GPGHAL 165 (266)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCSBT--TBC---------CTTBHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECCHHh--CCC---------CCCChH
Confidence 999997543 23456778889999999999998887 44 45679999999876 321 123345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cc-h-HHH-HHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AK-M-IPL-FMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~-~-~~~-~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
| .+|...+.....+..+ .|+++..++||.+.++..... .. . -.. ...... .....+.+++|+|+
T Consensus 166 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~------~p~~r~~~pedvA~ 239 (266)
T 3uxy_A 166 YCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRT------VPLGRIAEPEDIAD 239 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTT------STTSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhc------CCCCCCcCHHHHHH
Confidence 7 7787777666555544 389999999999987631000 00 0 000 011111 22235789999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+++.++.... .+.++++.+|..++
T Consensus 240 ~v~~L~s~~~~~itG~~i~vdGG~~~s 266 (266)
T 3uxy_A 240 VVLFLASDAARYLCGSLVEVNGGKAVA 266 (266)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHHHhCchhcCCcCCEEEECcCEeCC
Confidence 9999997643 34589998887653
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=9.6e-22 Score=164.36 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=147.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCcc-ccCceeecCCchhHhhh------CCCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTR-FFPGVMIAEEPQWRDCI------QGSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~-~~~~~d~~d~~~~~~~~------~~~d~ 89 (325)
...++++||||+|+||++++++|+++|++|++++|++++....... .... ....+|+.|.+.+.+++ .++|+
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~ 88 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSI 88 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcE
Confidence 3456899999999999999999999999999999986543221110 0000 14457888988887766 47999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||+||.... .....+.....+++|+.++.++++++ ++ .+.+++|++||... +..... .+..
T Consensus 89 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~~~~-------~~~~ 157 (254)
T 2wsb_A 89 LVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVA--RGAGAIVNLGSMSG--TIVNRP-------QFAS 157 (254)
T ss_dssp EEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCCSS-------SCBH
T ss_pred EEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEecchh--ccCCCC-------Ccch
Confidence 9999997533 22345667888999999966666554 44 45689999999876 432111 1124
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+..+ .+++++++||+.++++........-... ......+. ..+++++|+|++++.
T Consensus 158 ~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~~~ 231 (254)
T 2wsb_A 158 SYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPM------GRCGEPSEIAAAALF 231 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTT------SSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCC------CCCCCHHHHHHHHHH
Confidence 57 6777776665555443 3899999999999987421110000111 11122222 347899999999999
Q ss_pred HHcCCC---CCceEEeeCCC
Q 020476 238 ALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~ 254 (325)
++..+. .+.++++.+|.
T Consensus 232 l~~~~~~~~~G~~~~v~gG~ 251 (254)
T 2wsb_A 232 LASPAASYVTGAILAVDGGY 251 (254)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HhCcccccccCCEEEECCCE
Confidence 996532 34488887764
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3.4e-21 Score=160.14 Aligned_cols=215 Identities=16% Similarity=0.163 Sum_probs=151.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||++++++|+++|++|++++|+... ..... ..........+|+.|.+++.++++ ++
T Consensus 4 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 83 (246)
T 3osu_A 4 TKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSL 83 (246)
T ss_dssp SCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999998885422 11111 111111244689999988887765 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||.... ++ .+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~~-~~----------~~~ 150 (246)
T 3osu_A 84 DVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLR--QRSGAIINLSSVVGA-VG----------NPG 150 (246)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCHHHH-HC----------CTT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEEcchhhc-CC----------CCC
Confidence 999999997533 34456778889999999999999887 44 456799999998762 22 123
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+.. ..++++..++||.+.++.......-. ........|+ ..+.+.+|+|++++
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~-~~~~~~~~p~------~r~~~~~dva~~v~ 223 (246)
T 3osu_A 151 QANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDEL-KEQMLTQIPL------ARFGQDTDIANTVA 223 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHH-HHHHHTTCTT------CSCBCHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHH-HHHHHhcCCC------CCCcCHHHHHHHHH
Confidence 4567 778776666655554 35899999999999987543221111 1122222232 34778999999999
Q ss_pred HHHcCCC---CCceEEeeCCC
Q 020476 237 EALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~ 254 (325)
.+++.+. .+.++++.+|.
T Consensus 224 ~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 224 FLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHTSGGGTTCCSCEEEESTTS
T ss_pred HHhCccccCCCCCEEEeCCCc
Confidence 9997643 34589998875
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=163.01 Aligned_cols=226 Identities=16% Similarity=0.067 Sum_probs=155.1
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
+....++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++
T Consensus 8 ~~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 8 FHLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQF 87 (256)
T ss_dssp TCCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 33445789999999999999999999999999999998754332211 11111244689999988877765
Q ss_pred -CCCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 -GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 -~~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|++|||||..... +...+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+.
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~ 156 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAG--ENT---------NVR 156 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TCC---------CTT
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHH--cCC---------CCC
Confidence 799999999975332 3456778889999999999988886321 045679999999876 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+..+ .++++..++||.+.++.......-..........|+ ..+.+++|+|++++
T Consensus 157 ~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~~~~ 230 (256)
T 3gaf_A 157 MASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPL------GRLGEAQDIANAAL 230 (256)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTT------SSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCC------CCCCCHHHHHHHHH
Confidence 4567 7787777666655544 489999999999987631100000000112222222 34789999999999
Q ss_pred HHHcCCC---CCceEEeeCCCCCCH
Q 020476 237 EALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
.++.... .+.++++.+|...++
T Consensus 231 ~L~s~~~~~itG~~i~vdgG~~~~~ 255 (256)
T 3gaf_A 231 FLCSPAAAWISGQVLTVSGGGVQEL 255 (256)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCCC-
T ss_pred HHcCCcccCccCCEEEECCCccccC
Confidence 9997533 345999999876654
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.1e-21 Score=164.58 Aligned_cols=221 Identities=14% Similarity=0.112 Sum_probs=151.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++++||||+|+||+++++.|+++|++|++++|+.++..... ..........+|+.|.+++.++++ +
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 91 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGG 91 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 34578999999999999999999999999999999865432211 001111134578888888777665 7
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|+|||+||.... .+...+.++..+++|+.++.++++++. + .+.+++|++||... +...
T Consensus 92 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~--------- 158 (260)
T 2zat_A 92 VDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEK--RGGGSVLIVSSVGA--YHPF--------- 158 (260)
T ss_dssp CCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSCC---------
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEEechhh--cCCC---------
Confidence 9999999996421 234566788899999999988877753 4 45679999999876 4321
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .++++++++||.+.++..... ..-......... .....+.+++|+|+
T Consensus 159 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~dva~ 232 (260)
T 2zat_A 159 PNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKES------LRIRRLGNPEDCAG 232 (260)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHH------HTCSSCBCGGGGHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhc------CCCCCCCCHHHHHH
Confidence 223457 6777666665555443 489999999999987742110 000000001111 11234789999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
++..++..+. .+.++++.+|...|
T Consensus 233 ~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 233 IVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHHHcCcccCCccCCEEEECCCcccc
Confidence 9999987643 34499999988765
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=162.81 Aligned_cols=223 Identities=12% Similarity=0.044 Sum_probs=149.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|+++. ......... ....+|+.|.+++.++++ ++|+||
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34689999999999999999999999999999998765 322110000 245689999888877664 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+....| .
T Consensus 83 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~ 151 (256)
T 2d1y_A 83 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFA---------EQENAAYNA 151 (256)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSB---------CTTBHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccc--cCC---------CCCChhHHH
Confidence 99997533 23345677889999999999988776421 145679999999865 221 1223457 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
+|...+.....+..+ .++++++++||.+.++... ..... ....... +........+++++|+|++++.++
T Consensus 152 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 227 (256)
T 2d1y_A 152 SKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVL---EAIAL-SPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLA 227 (256)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH---HHHC---------CHHHHTTSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhh---hcccc-ccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHh
Confidence 777666655555443 4899999999998765210 00000 0000000 011122245899999999999999
Q ss_pred cCCC---CCceEEeeCCCCCCH
Q 020476 240 SNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~~s~ 258 (325)
+.+. .+.++++.+|...++
T Consensus 228 s~~~~~~~G~~~~v~gG~~~~~ 249 (256)
T 2d1y_A 228 SEKASFITGAILPVDGGMTASF 249 (256)
T ss_dssp SGGGTTCCSCEEEESTTGGGBC
T ss_pred CchhcCCCCCEEEECCCccccc
Confidence 7642 344899998865543
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=5.8e-21 Score=159.11 Aligned_cols=212 Identities=17% Similarity=0.118 Sum_probs=142.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC---------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~---------~~ 87 (325)
+++|+||||+|+||+++++.|+++| ++|++++|+.++...+... .....+..+|+.|.+.+.++++ ++
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~i 82 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCCC
Confidence 5689999999999999999999999 9999999987654333221 1111244688889888887776 89
Q ss_pred CEEEECCCCCC-C---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C------C-----CCCEEEEeeeeeeeecCCC
Q 020476 88 TAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E------G-----VRPSVLVSATALGYYGTSE 150 (325)
Q Consensus 88 d~vi~~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~------~-----~~~~v~~Ss~~v~~~g~~~ 150 (325)
|+||||||... . .....+.....+++|+.++.++++++.... . + .+++|++||... +....
T Consensus 83 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~~ 160 (250)
T 1yo6_A 83 SLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLG--SITDN 160 (250)
T ss_dssp CEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGG--CSTTC
T ss_pred cEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCcEEEEeccCcc--ccCCc
Confidence 99999999754 1 234566788899999999998888765410 1 3 678999999876 32211
Q ss_pred CceecCCCCCCCch-HHHHHHHHHHHHHhhcC---CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeec
Q 020476 151 TEVFDESSPSGNDY-LAEVCREWEGTALKVNK---DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 151 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~---~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (325)
. .....++...| .+|...+.....+..+. ++++++++||.+.++.... ..++
T Consensus 161 ~--~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------------------~~~~ 216 (250)
T 1yo6_A 161 T--SGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK----------------------NAAL 216 (250)
T ss_dssp C--STTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC---------------------------------
T ss_pred c--cccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC----------------------CCCC
Confidence 0 00001233457 67777776666655543 8999999999987763210 1368
Q ss_pred cHHHHHHHHHHHHcCCC--CCceEEeeCCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS--YRGVINGTAPNPVR 257 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~--~~~~~~~~~~~~~s 257 (325)
+.+|+|++++.++..+. ..|.|...++..++
T Consensus 217 ~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~ 249 (250)
T 1yo6_A 217 TVEQSTAELISSFNKLDNSHNGRFFMRNLKPYE 249 (250)
T ss_dssp --HHHHHHHHHHHTTCCGGGTTCEEETTEEECC
T ss_pred CHHHHHHHHHHHHhcccccCCCeEEEECCcCCC
Confidence 89999999999998765 45656555544444
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=8e-22 Score=166.72 Aligned_cols=221 Identities=18% Similarity=0.005 Sum_probs=150.0
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
....|+|+||||+|+||++++++|+++|++|++++| +........ .......+..+|+.|++.+.++++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 344578999999999999999999999999999999 433221110 001111244679999988887776
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeee-cCCCCceecCCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY-GTSETEVFDESSPS 160 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~-g~~~~~~~~e~~~~ 160 (325)
++|+|||+||.... .....+.+...+++|+.++.++++++.......+++|++||... + .. .+.
T Consensus 98 ~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~~sS~~~--~~~~---------~~~ 166 (274)
T 1ja9_A 98 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA--VMTG---------IPN 166 (274)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG--TCCS---------CCS
T ss_pred CCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCEEEEEcChHh--ccCC---------CCC
Confidence 79999999997532 23456677889999999999998887652111268999999876 4 21 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-cc--------chH-HHH--HHHcCCCCCCCcceee
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LA--------KMI-PLF--MMFAGGPLGSGQQWFS 224 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~--------~~~-~~~--~~~~~~~~~~~~~~~~ 224 (325)
...| .+|...+.....+..+ .+++++++|||.++++.... .. ... ... ....+. ....
T Consensus 167 ~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 240 (274)
T 1ja9_A 167 HALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN------PLKR 240 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS------TTSS
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcC------CCCC
Confidence 3457 7787777666655543 48999999999998763110 00 000 111 111122 2245
Q ss_pred eccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 225 WIHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++++|+|++++.++..+. .+.+|++.+|.
T Consensus 241 ~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG~ 273 (274)
T 1ja9_A 241 IGYPADIGRAVSALCQEESEWINGQVIKLTGGG 273 (274)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred ccCHHHHHHHHHHHhCcccccccCcEEEecCCc
Confidence 8999999999999997643 34589998773
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.9e-21 Score=161.86 Aligned_cols=212 Identities=13% Similarity=0.086 Sum_probs=148.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||++++++|+++|++|++++|+.++........ .......+|+.|++++.++++ ++|+|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3468999999999999999999999999999999865433211100 001244689999998888776 79999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.+...+++|+.++.++ ++.+++ .+.+++|++||... +... +....
T Consensus 86 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~ 152 (260)
T 1nff_A 86 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE--AGRGSIINISSIEG--LAGT---------VACHG 152 (260)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC---------TTBHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEeehhh--cCCC---------CCchh
Confidence 999997532 2345667888999999998554 444555 45679999999876 3311 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+ .|++++++|||.++++... ... ..+. ......+.+++|+|++++.++
T Consensus 153 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~-~~~----------~~~~-~~~~~~~~~~~dvA~~v~~l~ 220 (260)
T 1nff_A 153 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTD-WVP----------EDIF-QTALGRAAEPVEVSNLVVYLA 220 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGT-TSC----------TTCS-CCSSSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccc-cch----------hhHH-hCccCCCCCHHHHHHHHHHHh
Confidence 7 6777766666555443 5899999999999987422 100 0000 111234789999999999999
Q ss_pred cCCC---CCceEEeeCCCC
Q 020476 240 SNPS---YRGVINGTAPNP 255 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~ 255 (325)
..+. .+.+|++.+|..
T Consensus 221 s~~~~~~~G~~~~v~gG~~ 239 (260)
T 1nff_A 221 SDESSYSTGAEFVVDGGTV 239 (260)
T ss_dssp SGGGTTCCSCEEEESTTGG
T ss_pred CccccCCcCCEEEECCCee
Confidence 7542 344889988854
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.5e-21 Score=162.85 Aligned_cols=218 Identities=14% Similarity=0.080 Sum_probs=146.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++|+||||+|+||++++++|+++|++|++++|+++....... ......+..+|+.|.+++.++++ ++|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 34689999999999999999999999999999998654322110 00111244678889888877765 599
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCC-CCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGV-RPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+||||||.... .....+.+...+++|+.++..+.+ .+++ .+. +++|++||... +... +.
T Consensus 85 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~~~~iv~isS~~~--~~~~---------~~ 151 (251)
T 1zk4_A 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKN--KGLGASIINMSSIEG--FVGD---------PS 151 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--SSSCEEEEEECCGGG--TSCC---------TT
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh--cCCCCEEEEeCCchh--ccCC---------CC
Confidence 99999997532 234566778899999997666544 4455 455 78999999876 4321 23
Q ss_pred CCch-HHHHHHHHHHHHHhh-----cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
...| .+|...+.....+.. ..+++++++|||+++++....... ...... .........+++++|+|++
T Consensus 152 ~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~dva~~ 225 (251)
T 1zk4_A 152 LGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPG--AEEAMS----QRTKTPMGHIGEPNDIAYI 225 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTT--HHHHHT----STTTCTTSSCBCHHHHHHH
T ss_pred CccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCc--hhhhHH----HhhcCCCCCCcCHHHHHHH
Confidence 4467 677766655544332 458999999999999874211111 011100 1111112347899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
++.++..+. .+..+++.+|..
T Consensus 226 ~~~l~~~~~~~~~G~~~~v~gG~~ 249 (251)
T 1zk4_A 226 CVYLASNESKFATGSEFVVDGGYT 249 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHcCcccccccCcEEEECCCcc
Confidence 999997542 344888888753
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-21 Score=160.24 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=150.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++|+||||+|+||++++++|+++|++|++++|+.++....... .....+..+|+.|.+++.++++ ++|+
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 89 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDV 89 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCE
Confidence 3457899999999999999999999999999999987654322110 0011244689999998887776 8999
Q ss_pred EEECCCCCCCC---------CCChhhHHHHHHHhhHHHHHHHHHHhcCC--C------CCCCEEEEeeeeeeeecCCCCc
Q 020476 90 VVNLAGTPIGT---------RWSSEIKKEIKESRIRVTSKVVDLINESP--E------GVRPSVLVSATALGYYGTSETE 152 (325)
Q Consensus 90 vi~~a~~~~~~---------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~------~~~~~v~~Ss~~v~~~g~~~~~ 152 (325)
||||||..... ....+.+...+++|+.++.++++++.... . +.+++|++||... +...
T Consensus 90 li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~~--- 164 (265)
T 2o23_A 90 AVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FEGQ--- 164 (265)
T ss_dssp EEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHCC---
T ss_pred EEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEEEeCChhh--cCCC---
Confidence 99999975332 14566788899999999999988876420 1 4578999999876 3311
Q ss_pred eecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHHHHHHHcCCCCCCCcceeeecc
Q 020476 153 VFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 153 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
+....| .+|...+.....+..+ .++++++++||.+.++....... ... ......+.. ..+.+
T Consensus 165 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~~-----~~~~~ 231 (265)
T 2o23_A 165 ------VGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPFP-----SRLGD 231 (265)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCSSS-----CSCBC
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHH--HHHHcCCCc-----CCCCC
Confidence 233457 6776665555444433 48999999999998774221110 000 111111210 23789
Q ss_pred HHHHHHHHHHHHcCCCCCc-eEEeeCCCCC
Q 020476 228 LDDIVNLIYEALSNPSYRG-VINGTAPNPV 256 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~~~~-~~~~~~~~~~ 256 (325)
.+|+|++++.+++.+...| ++++.+|..+
T Consensus 232 ~~dva~~~~~l~~~~~~~G~~i~vdgG~~~ 261 (265)
T 2o23_A 232 PAEYAHLVQAIIENPFLNGEVIRLDGAIRM 261 (265)
T ss_dssp HHHHHHHHHHHHHCTTCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHHhhcCccCceEEEECCCEec
Confidence 9999999999998765444 8888887644
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.86 E-value=7.3e-22 Score=164.16 Aligned_cols=214 Identities=16% Similarity=0.157 Sum_probs=144.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCcccc-CceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFF-PGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~-~~~d~~d~~~~~~~~~-------~ 86 (325)
+++|+||||+|+||++++++|+++|++|+++ +|+.++...... ....... ..+|+.|.+.+.++++ +
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999998 776544322110 0000113 5678889888877653 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+|||+||.... .....+.+...+++|+.+ ++.+++.+++ .+.+++|++||.... ++. +
T Consensus 81 ~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~--~~~~~iv~~sS~~~~-~~~----------~ 147 (245)
T 2ph3_A 81 LDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMK--ARFGRIVNITSVVGI-LGN----------P 147 (245)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTHHH-HCC----------S
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHh--cCCCEEEEEeChhhc-cCC----------C
Confidence 9999999997532 234566778899999999 5555555655 466899999997651 331 1
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .+++++++||+.++++..... ..... ......+. ..+++++|+|++
T Consensus 148 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~ 219 (245)
T 2ph3_A 148 GQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKE--AYLKQIPA------GRFGRPEEVAEA 219 (245)
T ss_dssp SBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHTCTT------CSCBCHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence 23457 6777666555544443 389999999999987632111 11111 11122221 347899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++.++..+. .+.+|++.+|.
T Consensus 220 ~~~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 220 VAFLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHhCcccccccCCEEEECCCC
Confidence 999997642 34588888774
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.86 E-value=2.5e-21 Score=161.82 Aligned_cols=223 Identities=14% Similarity=0.019 Sum_probs=147.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.++++||||+|+||++++++|+++|++|++++|+.+.. ..+...........+|+.|++++.++++ ++|+|
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 83 (255)
T 2q2v_A 4 GKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVDIL 83 (255)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCSEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999999999999999987521 1111111111234679999998888776 79999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
||+||.... .....+.++..+++|+.++.++.+ .+++ .+.+++|++||... +... +....
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~ 150 (255)
T 2q2v_A 84 VNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRA--RNWGRIINIASVHG--LVGS---------TGKAA 150 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSCC---------TTBHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcCchh--ccCC---------CCchh
Confidence 999997532 234567788899999997655544 4555 56689999999876 3311 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH---HHHcCCCC-CCCcceeeeccHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF---MMFAGGPL-GSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~v~v~D~a~a~ 235 (325)
| .+|...+.....+..+ .++++++++||.++++............ .......+ ........+++++|+|+++
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 230 (255)
T 2q2v_A 151 YVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELV 230 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHH
Confidence 7 6777666666555543 4899999999999887421100000000 00000000 1112224589999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+.++..+. .+.+|++.+|..
T Consensus 231 ~~l~s~~~~~~tG~~~~vdgG~~ 253 (255)
T 2q2v_A 231 LFLCSEAGSQVRGAAWNVDGGWL 253 (255)
T ss_dssp HHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHhCCccCCCCCCEEEECCCcc
Confidence 99987543 344888888743
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.6e-21 Score=163.53 Aligned_cols=224 Identities=16% Similarity=0.049 Sum_probs=151.8
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+ |+||+++++.|+++|++|++++|+.+. ...+...........+|+.|++++.++++ +
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999 999999999999999999999998641 11111000001245689999988877765 7
Q ss_pred CCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+||||||.... .....+.++..+++|+.++.++++++.......+++|++||... +.. .+
T Consensus 87 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~ 155 (261)
T 2wyu_A 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EKV---------VP 155 (261)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TSB---------CT
T ss_pred CCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEecccc--cCC---------CC
Confidence 8999999997531 13456778899999999999999999873112358999999765 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .++++++++||.++++........-... ......|+ ..+.+++|+|++
T Consensus 156 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~ 229 (261)
T 2wyu_A 156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPL------RRNITQEEVGNL 229 (261)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence 23457 6777776666555443 3899999999999987432211111111 11111222 236789999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCCCHH
Q 020476 235 IYEALSNPS---YRGVINGTAPNPVRLA 259 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~s~~ 259 (325)
++.++.... .+.++++.+|..++..
T Consensus 230 v~~l~s~~~~~~tG~~~~vdgG~~~~~~ 257 (261)
T 2wyu_A 230 GLFLLSPLASGITGEVVYVDAGYHIMGM 257 (261)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGGGBC-
T ss_pred HHHHcChhhcCCCCCEEEECCCccccCC
Confidence 999996532 3448999888655433
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=158.42 Aligned_cols=204 Identities=19% Similarity=0.162 Sum_probs=133.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
..+.++|+||||+|+||++++++|+++|++|++++|++++...............+|+.|.+++.++++ ++|+
T Consensus 2 ~~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 2 EGMKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp --CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 445678999999999999999999999999999999865433221100011244679999888876654 7899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||+||.... .....+.+...+++|+.++.++ ++.+++ .+.+++|++||... +.. .+...
T Consensus 82 li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~---------~~~~~ 148 (234)
T 2ehd_A 82 LVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLR--RGGGTIVNVGSLAG--KNP---------FKGGA 148 (234)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--TTCEEEEEECCTTT--TSC---------CTTCH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCcEEEEECCchh--cCC---------CCCCc
Confidence 9999996532 2335667888999999998654 445555 56789999999876 331 12334
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+.. ..+++++++|||.+..+..... + .. ..+++.+|+|++++.+
T Consensus 149 ~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~----~-------~~-------~~~~~~~dvA~~~~~l 210 (234)
T 2ehd_A 149 AYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT----P-------GQ-------AWKLKPEDVAQAVLFA 210 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC----------------------------------CCHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc----c-------cc-------cCCCCHHHHHHHHHHH
Confidence 57 677655554444333 2589999999999876532110 0 00 1157999999999999
Q ss_pred HcCCC--CCceEEee
Q 020476 239 LSNPS--YRGVINGT 251 (325)
Q Consensus 239 ~~~~~--~~~~~~~~ 251 (325)
+..+. ..|...+.
T Consensus 211 ~~~~~~~~~g~~~~~ 225 (234)
T 2ehd_A 211 LEMPGHAMVSEIELR 225 (234)
T ss_dssp HHSCCSSCCCEEECC
T ss_pred hCCCcccccceEEEe
Confidence 98764 33444343
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.86 E-value=5.3e-21 Score=160.09 Aligned_cols=221 Identities=14% Similarity=0.015 Sum_probs=146.6
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
|....+++|||||+|+||+++++.|+++|++|++++|+.++......... .....+|+.|.+++.++++ ++|
T Consensus 23 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (260)
T 3gem_A 23 MTLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAG-AVALYGDFSCETGIMAFIDLLKTQTSSLR 101 (260)
T ss_dssp ----CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHT-CEEEECCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcC-CeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 44445689999999999999999999999999999998865322111000 1245689999988877664 689
Q ss_pred EEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 89 AVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 89 ~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
+|||+||..... ....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+....|
T Consensus 102 ~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y 170 (260)
T 3gem_A 102 AVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVT--RKG---------SSKHIAY 170 (260)
T ss_dssp EEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GTC---------CSSCHHH
T ss_pred EEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhh--cCC---------CCCcHhH
Confidence 999999975332 2334556788999999998888776431 145578999999876 321 1234467
Q ss_pred -HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 165 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+|...+.....+..+. ++++..++||.+..+..... .... ......++ ..+..++|+|++++.+++.
T Consensus 171 ~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~-~~~~--~~~~~~p~------~r~~~~edva~~v~~L~~~ 241 (260)
T 3gem_A 171 CATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDA-AYRA--NALAKSAL------GIEPGAEVIYQSLRYLLDS 241 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC------------------CCS------CCCCCTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCH-HHHH--HHHhcCCC------CCCCCHHHHHHHHHHHhhC
Confidence 77877766665555442 59999999999987642110 0000 11111121 2356789999999999976
Q ss_pred CCCCc-eEEeeCCCCCC
Q 020476 242 PSYRG-VINGTAPNPVR 257 (325)
Q Consensus 242 ~~~~~-~~~~~~~~~~s 257 (325)
+...| ++++.+|..++
T Consensus 242 ~~itG~~i~vdGG~~~~ 258 (260)
T 3gem_A 242 TYVTGTTLTVNGGRHVK 258 (260)
T ss_dssp SSCCSCEEEESTTTTTC
T ss_pred CCCCCCEEEECCCcccC
Confidence 55444 89999887664
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.86 E-value=1.8e-21 Score=163.23 Aligned_cols=220 Identities=14% Similarity=0.019 Sum_probs=144.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~------~ 86 (325)
..++++||||+|+||+++++.|+++|++|++++|++++....... ........+|+.|++++.++++ +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 346899999999999999999999999999999986543221100 0011244579999998887775 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+|||+||.... .....+.+...+++|+.++..+.+++ ++ .+.+++|++||... +... +
T Consensus 86 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~ 152 (260)
T 2z1n_A 86 ADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVE--KGWGRMVYIGSVTL--LRPW---------Q 152 (260)
T ss_dssp CSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC---------T
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECchhh--cCCC---------C
Confidence 9999999996532 23456678889999999986655544 44 45689999999876 4321 2
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-------chHHHHHHHcCCCCCCCcceeeeccH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-------KMIPLFMMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~v~v 228 (325)
....| .+|...+.....+..+ .|+++++++||+++++...... ...... . ...+........+.+.
T Consensus 153 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~p~~r~~~~ 229 (260)
T 2z1n_A 153 DLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEE--A-LKSMASRIPMGRVGKP 229 (260)
T ss_dssp TBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC--------------------------CCTTSSCCCH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHH--H-HHHHHhcCCCCCccCH
Confidence 23456 6666655555444433 4899999999999987532100 000000 0 0001111112237899
Q ss_pred HHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 229 DDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+|+|++++.++..+. .+.++++.+|.
T Consensus 230 ~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 230 EELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 999999999997532 34488887774
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.86 E-value=4.2e-21 Score=162.63 Aligned_cols=223 Identities=13% Similarity=0.075 Sum_probs=147.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-cccccC----CC-CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~~----~~-~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
+.+++|||||+|+||++++++|+++|++|++++|+.. ...... .. ........+|+.|.+++.++++
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 103 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG 103 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence 3468999999999999999999999999999999542 211110 00 1111244689999988887765
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+||||||.... .+...+.+...+++|+.++.++++++ ++ .+.+++|++||... +.. .
T Consensus 104 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~ 170 (281)
T 3v2h_A 104 GADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKK--KGWGRIINIASAHG--LVA---------S 170 (281)
T ss_dssp SCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------C
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEECCccc--ccC---------C
Confidence 78999999997533 23356778889999999999988876 44 35578999999876 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHc----CCCCCCCcceeeeccHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFA----GGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|...+.....+..+ .|+++..++||.+.++..... ........... ...+........+.+++
T Consensus 171 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~e 250 (281)
T 3v2h_A 171 PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTKKFITVE 250 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTCSCBCHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCCCccCHH
Confidence 234467 7787777666555543 489999999999998742211 00000000000 00112333445689999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
|+|++++.++..+. .+.++++.+|.
T Consensus 251 dvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 251 QVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp HHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred HHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 99999999997654 34488888874
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.86 E-value=5e-21 Score=160.15 Aligned_cols=219 Identities=14% Similarity=0.082 Sum_probs=152.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..+++|||||+|+||.+++++|+++|++|++++|+.++..... ..........+|+.|++++.++++ ++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3468999999999999999999999999999999875533221 111111244689999988877765 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH-----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI-----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~-----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|++|||||.... .+...+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~ 151 (257)
T 3imf_A 85 DILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEK--GIKGNIINMVATYA--WDA---------GP 151 (257)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--TCCCEEEEECCGGG--GSC---------CT
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhh--CCCcEEEEECchhh--ccC---------CC
Confidence 999999996432 34456778899999999999988887 44 44678999999876 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhh----cCCceEEEEEeceEEcCCCCcc----cchHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKV----NKDVRLALIRIGIVLGKDGGAL----AKMIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~----~~~~~~~ilRp~~i~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
....| .+|...+.....+.. ..|+++..++||.+.++..... ..+.. ......| ...+.+.+|
T Consensus 152 ~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~--~~~~~~p------~~r~~~ped 223 (257)
T 3imf_A 152 GVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAK--RTIQSVP------LGRLGTPEE 223 (257)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSH--HHHTTST------TCSCBCHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHH--HHHhcCC------CCCCcCHHH
Confidence 33457 677666655544443 3489999999999998753211 01111 1111112 234789999
Q ss_pred HHHHHHHHHcCCC---CCceEEeeCCCCCCH
Q 020476 231 IVNLIYEALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 231 ~a~a~~~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
+|++++.++..+. .+.++++.+|..++.
T Consensus 224 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~~ 254 (257)
T 3imf_A 224 IAGLAYYLCSDEAAYINGTCMTMDGGQHLHQ 254 (257)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTSCC
T ss_pred HHHHHHHHcCchhcCccCCEEEECCCcccCC
Confidence 9999999997643 344889988876543
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.86 E-value=3.7e-21 Score=162.17 Aligned_cols=220 Identities=17% Similarity=0.076 Sum_probs=150.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc---ccCCCCCccccCceeecCCchhHhhhC------CCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEPQWRDCIQ------GST 88 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~d~~~~~~~~~------~~d 88 (325)
...++++||||+|+||++++++|+++|++|++++|+..... .............+|+.|.+++.++.+ ++|
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD 108 (273)
T 3uf0_A 29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD 108 (273)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence 34568999999999999999999999999999997643211 111111111244578888887766543 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||||||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||... +.. .+..
T Consensus 109 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~IV~isS~~~--~~~---------~~~~ 175 (273)
T 3uf0_A 109 VLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLA--HGSGRIVTIASMLS--FQG---------GRNV 175 (273)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CSSC
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchHh--cCC---------CCCC
Confidence 99999997533 23456778889999999999888876 33 35678999999876 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .|+++..++||.+.++........-... ......|. ..+.+++|+|++++
T Consensus 176 ~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~ 249 (273)
T 3uf0_A 176 AAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPA------GRWATPEDMVGPAV 249 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTT------SSCBCGGGGHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCC------CCCCCHHHHHHHHH
Confidence 467 7787777666665554 5899999999999987421110000111 11122222 24788999999999
Q ss_pred HHHcCCC---CCceEEeeCCCCC
Q 020476 237 EALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~~ 256 (325)
.++.... .+.++++.+|...
T Consensus 250 ~L~s~~a~~itG~~i~vdGG~~~ 272 (273)
T 3uf0_A 250 FLASDAASYVHGQVLAVDGGWLA 272 (273)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHhCchhcCCcCCEEEECcCccC
Confidence 9997632 3448899888644
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=2.7e-21 Score=162.51 Aligned_cols=222 Identities=13% Similarity=0.065 Sum_probs=150.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCC-CCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG-KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~-~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
.++++++||||+|+||++++++|+++|++|++++|+....... ... .....+..+|+.|.+++.++++
T Consensus 5 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 84 (264)
T 3i4f_A 5 RFVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFG 84 (264)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4567899999999999999999999999999998876432111 000 0111245689999998887765
Q ss_pred CCCEEEECCCC--CC---CCCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 GSTAVVNLAGT--PI---GTRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 ~~d~vi~~a~~--~~---~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+||||||. .. ..+...+.+...+++|+.++.++++++ ++ .+.+++|++||.+. ++..
T Consensus 85 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~iss~~~--~~~~------- 153 (264)
T 3i4f_A 85 KIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRK--QNFGRIINYGFQGA--DSAP------- 153 (264)
T ss_dssp CCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTTG--GGCC-------
T ss_pred CCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHh--cCCCeEEEEeechh--cccC-------
Confidence 79999999993 21 134456778889999999999998887 55 45678999998754 2211
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..+....| .+|...+.....+..+ .++++..++||.++++..... ....... .........+.+.+|+|
T Consensus 154 ~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~~~~~----~~~~~p~~r~~~~~dva 226 (264)
T 3i4f_A 154 GWIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEAT---IQEARQL----KEHNTPIGRSGTGEDIA 226 (264)
T ss_dssp CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCC---HHHHHHC------------CCCCHHHHH
T ss_pred CCCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhc---cHHHHHH----HhhcCCCCCCcCHHHHH
Confidence 11233467 7777766666555544 589999999999998753221 1111110 01111223478999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
++++.++..+. .+.++++.+|....
T Consensus 227 ~~v~~l~s~~~~~itG~~i~vdGG~~~~ 254 (264)
T 3i4f_A 227 RTISFLCEDDSDMITGTIIEVTGAVDVI 254 (264)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESCSCCCC
T ss_pred HHHHHHcCcccCCCCCcEEEEcCceeec
Confidence 99999997643 34599999886543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.4e-21 Score=161.60 Aligned_cols=220 Identities=17% Similarity=0.078 Sum_probs=153.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||+++++.|+++|++|++++|+.++..... ... .......+|+.|++++.++++ +
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3468999999999999999999999999999999875533211 111 111244689999988887765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++|||||.... .+...+.++..+++|+.++.++++++... ..+.+++|++||......+ .+..
T Consensus 89 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~----------~~~~ 158 (262)
T 3pk0_A 89 IDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG----------YPGW 158 (262)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC----------CTTC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC----------CCCC
Confidence 9999999997533 34456778889999999998887776542 0256799999997641011 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .|+++..++||.++++..... ..... ......|. ..+.+.+|+|+++.
T Consensus 159 ~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~r~~~p~dva~~v~ 230 (262)
T 3pk0_A 159 SHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIA--SMARSIPA------GALGTPEDIGHLAA 230 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHH--HHHTTSTT------SSCBCHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence 467 7787777666666554 589999999999988732111 11111 12222222 23678999999999
Q ss_pred HHHcCCC---CCceEEeeCCCCC
Q 020476 237 EALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~~ 256 (325)
.++.... .+.++++.+|..+
T Consensus 231 ~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 231 FLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHhCccccCCcCCEEEECCCeec
Confidence 9997543 3448899888654
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.85 E-value=3.8e-21 Score=163.07 Aligned_cols=226 Identities=12% Similarity=0.065 Sum_probs=152.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc------------c----cCCCCCccccCceeecCCchhHh
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L----IFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~----~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
..++++||||+|+||+++++.|+++|++|++++|++.... . ............+|+.|.+++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 3468999999999999999999999999999999743210 0 00001111234679999988887
Q ss_pred hhC-------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecC
Q 020476 83 CIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGT 148 (325)
Q Consensus 83 ~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~ 148 (325)
+++ ++|++|||||.... .+...+.++..+++|+.++.++++++ ++ .+.+++|++||... +..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~ 164 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIK--RNYGRIVTVSSMLG--HSA 164 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--GSC
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEECChhh--cCC
Confidence 765 79999999997533 34467778899999999999988875 33 35579999999876 321
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cchHHHHHH--Hc--CCCC-
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMM--FA--GGPL- 216 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~~~~~~~~--~~--~~~~- 216 (325)
.+....| .+|...+.....+..+ .|+++..++||.++++..... ..+.+.... .. ...+
T Consensus 165 ---------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (281)
T 3s55_A 165 ---------NFAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA 235 (281)
T ss_dssp ---------CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH
T ss_pred ---------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH
Confidence 1234467 7787777666666554 489999999999999854221 000000000 00 0000
Q ss_pred CCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 217 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 217 ~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
........+.+++|+|++++.++.++. .+.++++.+|...+
T Consensus 236 ~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~~~ 279 (281)
T 3s55_A 236 SLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGATAR 279 (281)
T ss_dssp HHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred hhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcccC
Confidence 001122568999999999999997643 34599999886543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-21 Score=162.20 Aligned_cols=218 Identities=12% Similarity=0.093 Sum_probs=136.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
...|+|+||||+|+||++++++|+++|++|+++ .|++........ ......+..+|+.|++.+.++++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 345799999999999999999999999999999 555543322110 01111244679999988887765
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||.... ++. +.
T Consensus 83 ~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~ 151 (247)
T 2hq1_A 83 RIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGI-IGN----------AG 151 (247)
T ss_dssp CCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC--------------------
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhc-cCC----------CC
Confidence 79999999997532 12234556788999999987777765421 0356799999997541 442 22
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++++++|+.+.++...... .... ....+.+ ...+++++|+|+++
T Consensus 152 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 152 QANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKE--MYLNNIP------LKRFGTPEEVANVV 223 (247)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHTTST------TSSCBCHHHHHHHH
T ss_pred CcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHH--HHHhhCC------CCCCCCHHHHHHHH
Confidence 3457 6777666665555443 4899999999998765211111 1111 1112222 23478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++..+. .+.+|++.+|.
T Consensus 224 ~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 224 GFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCcccccccCcEEEeCCCc
Confidence 99987542 34489998875
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=9.7e-21 Score=158.10 Aligned_cols=216 Identities=14% Similarity=0.089 Sum_probs=146.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||+++++.|+++|++|++++|+.++....... ........+|+.|++++.++++ ++|+||
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 84 (254)
T 1hdc_A 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV 84 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999986543322111 1111234578999988887765 799999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHH----HHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTS----KVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~----~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||.... .....+.+...+++|+.++. .+++.+++ .+.+++|++||... +.. .+....|
T Consensus 85 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~~Y 151 (254)
T 1hdc_A 85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKD--AGGGSIVNISSAAG--LMG---------LALTSSY 151 (254)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTCHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEECchhh--ccC---------CCCchhH
Confidence 99997532 23456678889999999987 45555655 45689999999876 321 1234467
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeec-cHHHHHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWI-HLDDIVNLIYEAL 239 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~D~a~a~~~~~ 239 (325)
.+|...+.....+..+ .++++++++||.++++.. ..........+........+. +.+|+|++++.++
T Consensus 152 ~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-------~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v~~l~ 224 (254)
T 1hdc_A 152 GASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMT-------AETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLL 224 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH-------HHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccc-------cccchhHHHHHHhcCCCCCCCCCHHHHHHHHHHHh
Confidence 6777666555554443 489999999999987631 000000000011111112367 9999999999999
Q ss_pred cCCC---CCceEEeeCCCC
Q 020476 240 SNPS---YRGVINGTAPNP 255 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~ 255 (325)
..+. .+..+++.+|..
T Consensus 225 s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 225 SDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp SGGGTTCCSCEEEESTTTT
T ss_pred CchhcCCCCCEEEECCCcc
Confidence 7642 344888887753
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.1e-21 Score=159.34 Aligned_cols=214 Identities=13% Similarity=0.037 Sum_probs=138.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC----CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ----GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~----~~d~vi~~a~ 95 (325)
|++|+||||+|+||+++++.|+++|++|++++|+.++... ...+|+.|.+++.++++ ++|+||||||
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---------~~~~Dl~~~~~v~~~~~~~~~~id~lv~~Ag 71 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---------DLSTAEGRKQAIADVLAKCSKGMDGLVLCAG 71 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---------CTTSHHHHHHHHHHHHTTCTTCCSEEEECCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---------ccccCCCCHHHHHHHHHHhCCCCCEEEECCC
Confidence 4689999999999999999999999999999998765432 13479999998888875 4599999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCce-----ecCC-----------
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV-----FDES----------- 157 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~-----~~e~----------- 157 (325)
.... ...++..+++|+.++.++++++... ..+.+++|++||... +......+ ..+.
T Consensus 72 ~~~~----~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (257)
T 1fjh_A 72 LGPQ----TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVAS--AHLAFDKNPLALALEAGEEAKARAIVEH 145 (257)
T ss_dssp CCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG--GSSCGGGCTTHHHHHHTCHHHHHHHHHT
T ss_pred CCCC----cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhh--hccccccchhhhhhcccchhhhhhhhhc
Confidence 6521 2237889999999999988877521 145689999999887 52111100 0000
Q ss_pred -CC--CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cc-hHHHHHHHcCCCCCCCcceeeeccH
Q 020476 158 -SP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK-MIPLFMMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 158 -~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~v~v 228 (325)
.+ ....| .+|...+.....+..+ .++++++++||.+.++..... .. ... ..... + ......+.++
T Consensus 146 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~--~~~~~--~--~~~~~~~~~~ 219 (257)
T 1fjh_A 146 AGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYG--ESIAK--F--VPPMGRRAEP 219 (257)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC-------------------------C--CCSTTSCCCT
T ss_pred ccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHH--HHHHh--c--ccccCCCCCH
Confidence 11 22346 6777666666555443 589999999999988743211 00 000 00000 0 1111237899
Q ss_pred HHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 229 DDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+|+|++++.++..+. ..| .+++.+|.
T Consensus 220 ~dvA~~~~~l~~~~~~~~tG~~~~vdgG~ 248 (257)
T 1fjh_A 220 SEMASVIAFLMSPAASYVHGAQIVIDGGI 248 (257)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHHHHHhCchhcCCcCCEEEECCCc
Confidence 999999999997652 334 77777764
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.85 E-value=2.5e-20 Score=156.40 Aligned_cols=212 Identities=12% Similarity=-0.018 Sum_probs=146.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..+++|||||+|+||+++++.|+++|++|++++|+++... . .....+|+.|.+++.++++ ++|+||
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~----~---~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv 79 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPGEA----K---YDHIECDVTNPDQVKASIDHIFKEYGSISVLV 79 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCCSC----S---SEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCcccCC----c---eEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578999999999999999999999999999999875411 1 1145689999988887765 699999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+....| .
T Consensus 80 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~ 148 (264)
T 2dtx_A 80 NNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQA--SII---------TKNASAYVT 148 (264)
T ss_dssp ECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchh--ccC---------CCCchhHHH
Confidence 99997533 23356778899999999988877766431 135679999999876 331 1233457 6
Q ss_pred HHHHHHHHHHHHhhcCC--ceEEEEEeceEEcCCCCcccc-----hH----HHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 166 AEVCREWEGTALKVNKD--VRLALIRIGIVLGKDGGALAK-----MI----PLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~--~~~~ilRp~~i~g~~~~~~~~-----~~----~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+|...+.....+..+.+ +++++++||.+.++....... .- ... ......+ ...+++++|+|+
T Consensus 149 sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~p~dvA~ 222 (264)
T 2dtx_A 149 SKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHP------MQRIGKPQEVAS 222 (264)
T ss_dssp HHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHST------TSSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCC------CCCCcCHHHHHH
Confidence 77777666655554432 999999999997652110000 00 001 1111111 134789999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++.++..+. .+.++++.++.
T Consensus 223 ~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 223 AVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCchhcCCCCcEEEECCCc
Confidence 9999997542 34488888774
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.9e-20 Score=157.18 Aligned_cols=205 Identities=15% Similarity=0.144 Sum_probs=144.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.+.++++||||+|+||+++++.|+++|++|++++|+.+........ ......+|+.|.+++.++++ ++|+|
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP--NTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTCCT--TEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhhcC--CceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 3456899999999999999999999999999999987654433221 11245689999988887765 78999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+....
T Consensus 92 vnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~IV~isS~~~--~~~---------~~~~~~ 158 (266)
T 3p19_A 92 VNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKA--RNCGTIINISSIAG--KKT---------FPDHAA 158 (266)
T ss_dssp EECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSC---------CTTCHH
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEEcChhh--CCC---------CCCCch
Confidence 999997533 23456678889999999998866654 44 46689999999876 321 123346
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc--chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+.....+..+ .|+++..++||.|.++...... .....+... ..+ ...+++++|+|++++.
T Consensus 159 Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~-~~~------~~r~~~pedvA~av~~ 231 (266)
T 3p19_A 159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAW-RVD------MGGVLAADDVARAVLF 231 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHH-HHH------TTCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhh-ccc------ccCCCCHHHHHHHHHH
Confidence 7 6777766665555543 5899999999999887422111 111111100 001 1237899999999999
Q ss_pred HHcCCCC
Q 020476 238 ALSNPSY 244 (325)
Q Consensus 238 ~~~~~~~ 244 (325)
+++++..
T Consensus 232 l~~~~~~ 238 (266)
T 3p19_A 232 AYQQPQN 238 (266)
T ss_dssp HHHSCTT
T ss_pred HHcCCCC
Confidence 9998763
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.7e-21 Score=160.60 Aligned_cols=225 Identities=12% Similarity=0.062 Sum_probs=153.2
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
|....++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++
T Consensus 23 ~~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 23 MDLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 444557899999999999999999999999999999987543322111 1111244689999988877765 79
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+||||||.... .....+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+...
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 171 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTA--TSA---------IADRT 171 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGG--TSC---------CTTBH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--CcC---------CCCCh
Confidence 999999997533 23456778889999999988877766321 045569999999876 321 12234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCC-CCcc---cchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD-GGAL---AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~-~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...+.....+..+ .|+++..++||.+.++. .... ....... ......+ ...+.+++|+|+
T Consensus 172 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~------~~r~~~pedvA~ 245 (277)
T 4dqx_A 172 AYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAV------MDRMGTAEEIAE 245 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTST------TCSCBCHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCc------ccCCcCHHHHHH
Confidence 67 7777776666555543 48999999999998752 1000 0011111 1111222 234778999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+++.++.... .+.++++.+|..++
T Consensus 246 ~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 246 AMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHHHHhCCccCCCcCCEEEECCchhhh
Confidence 9999997543 34589998887554
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=159.53 Aligned_cols=220 Identities=12% Similarity=-0.016 Sum_probs=146.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++|+||||+|+||++++++|+++|++|++++| +.+....... ......+..+|+.|.+.+.++++ +
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3468999999999999999999999999999999 5433221110 00111244578889888877765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+||||||.... .....+.+...+++|+.++.++++++.... .+ .+++|++||... +.. .+.
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~ 154 (261)
T 1gee_A 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHE--KIP---------WPL 154 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGG--TSC---------CTT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHh--cCC---------CCC
Confidence 9999999997532 234566788899999999888777654310 23 579999999765 221 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .+++++++||+.++++........-... ......+. ..+++++|+|+++
T Consensus 155 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~~~ 228 (261)
T 1gee_A 155 FVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPM------GYIGEPEEIAAVA 228 (261)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTT------SSCBCHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 4467 6776666555444433 4899999999999987421110000011 11111121 3478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+.++..+. .+.++++.++..
T Consensus 229 ~~l~~~~~~~~~G~~~~v~gg~~ 251 (261)
T 1gee_A 229 AWLASSEASYVTGITLFADGGMT 251 (261)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHhCccccCCCCcEEEEcCCcc
Confidence 99997532 344888888754
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1e-20 Score=157.40 Aligned_cols=221 Identities=12% Similarity=0.039 Sum_probs=152.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ +
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 446799999999999999999999999999999998755332211 01111244679999888877664 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+..
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~ 151 (247)
T 3lyl_A 83 IDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVG--SAG---------NPGQ 151 (247)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH--HHC---------CTTC
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhh--ccC---------CCCc
Confidence 8999999997533 23456778889999999998888775321 034568999999866 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .++++..++||.+.++.......... ...... .....+.+++|+|++++.
T Consensus 152 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~-~~~~~~------~~~~~~~~~~dva~~i~~ 224 (247)
T 3lyl_A 152 TNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQK-SFIATK------IPSGQIGEPKDIAAAVAF 224 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHH-HHHHTT------STTCCCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHH-HHHhhc------CCCCCCcCHHHHHHHHHH
Confidence 467 6777666555554443 48999999999998875332211111 011111 222457899999999999
Q ss_pred HHcCCC---CCceEEeeCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~ 256 (325)
++.... .+.++++.+|..+
T Consensus 225 l~s~~~~~~tG~~i~vdgG~~~ 246 (247)
T 3lyl_A 225 LASEEAKYITGQTLHVNGGMYM 246 (247)
T ss_dssp HHSGGGTTCCSCEEEESTTSSC
T ss_pred HhCCCcCCccCCEEEECCCEec
Confidence 997543 3459999888654
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=159.39 Aligned_cols=219 Identities=14% Similarity=0.078 Sum_probs=146.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhh--------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCI--------Q 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~--------~ 85 (325)
...++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|++++.+++ .
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 98 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDG 98 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTS
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998654322110 0111123467999988887766 4
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++|||||.... .+...+.++..+++|+.++.++++++. + .+.+++|++||... +...
T Consensus 99 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~~g~iv~isS~~~--~~~~--------- 165 (273)
T 1ae1_A 99 KLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKA--SQNGNVIFLSSIAG--FSAL--------- 165 (273)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTSEEEEEECCGGG--TSCC---------
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCcEEEEEcCHhh--cCCC---------
Confidence 79999999997532 234566788899999999999988773 3 34579999999876 4321
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc----hHHHH-HHHcCCCCCCCcceeeeccHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK----MIPLF-MMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|...+.....+..+ .++++++++||.++++....... ..... ......|+ ..+.+.+
T Consensus 166 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~ 239 (273)
T 1ae1_A 166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPM------GRAGKPQ 239 (273)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTT------CSCBCHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCC------CCCcCHH
Confidence 233467 6777666655555443 48999999999999875321100 00011 11111222 2378999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
|+|++++.++.... .+.++++.+|..
T Consensus 240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 268 (273)
T 1ae1_A 240 EVSALIAFLCFPAASYITGQIIWADGGFT 268 (273)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCccccCcCCCEEEECCCcc
Confidence 99999999987532 344888888753
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=156.59 Aligned_cols=219 Identities=10% Similarity=-0.037 Sum_probs=148.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh---CCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---~~~d~vi~~a~ 95 (325)
..|+++||||+|+||++++++|+++|++|++++|++++..... .........+|+.|++++.++. .++|+||||||
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag 83 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence 3468999999999999999999999999999999875543332 1111124467888988887664 47999999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC 169 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~ 169 (325)
.... .+...+.++..+++|+.++.++++++... ..+.+++|++||... +.... +....| .+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~--------~~~~~Y~~sK~a 153 (246)
T 2ag5_A 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVAS--SVKGV--------VNRCVYSTTKAA 153 (246)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBT--TTBCC--------TTBHHHHHHHHH
T ss_pred cCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHh--CcCCC--------CCCccHHHHHHH
Confidence 7533 23356678889999999998888876421 035679999999865 32110 123457 67777
Q ss_pred HHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-cc---chHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 170 REWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LA---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~---~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+.....+..+ .+++++++|||+++++.... .. ...... ......+. ..+.+.+|+|++++.++..
T Consensus 154 ~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~v~~l~s~ 227 (246)
T 2ag5_A 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKT------GRFATAEEIAMLCVYLASD 227 (246)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTT------SSCEEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCC------CCCCCHHHHHHHHHHHhCc
Confidence 66666555443 48999999999999874211 00 000011 11111222 2378999999999999975
Q ss_pred CC---CCceEEeeCCC
Q 020476 242 PS---YRGVINGTAPN 254 (325)
Q Consensus 242 ~~---~~~~~~~~~~~ 254 (325)
+. .+.++++.+|.
T Consensus 228 ~~~~~tG~~i~vdgG~ 243 (246)
T 2ag5_A 228 ESAYVTGNPVIIDGGW 243 (246)
T ss_dssp GGTTCCSCEEEECTTG
T ss_pred cccCCCCCEEEECCCc
Confidence 43 34488887774
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-20 Score=153.11 Aligned_cols=205 Identities=15% Similarity=0.077 Sum_probs=148.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
..++++||||+|+||++++++|+++|++|++++|+.. +|+.|++++.++++ ++|++|||||
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~----------------~D~~~~~~v~~~~~~~g~id~lv~nAg 68 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG----------------LDISDEKSVYHYFETIGAFDHLIVTAG 68 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT----------------CCTTCHHHHHHHHHHHCSEEEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc----------------cCCCCHHHHHHHHHHhCCCCEEEECCC
Confidence 3468999999999999999999999999999998753 68889888887775 7899999999
Q ss_pred CCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHH
Q 020476 96 TPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR 170 (325)
Q Consensus 96 ~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~ 170 (325)
.... .+...+.+...+++|+.++.++++++.......+++|++||... +.. .+....| .+|...
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~~Y~asK~a~ 137 (223)
T 3uce_A 69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLS--RKV---------VANTYVKAAINAAI 137 (223)
T ss_dssp CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGG--TSC---------CTTCHHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhh--ccC---------CCCchHHHHHHHHH
Confidence 6521 34556778889999999999999998763222358999999876 331 1234467 778777
Q ss_pred HHHHHHHhhcC-CceEEEEEeceEEcCCCCcc-cchHH-HH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 171 EWEGTALKVNK-DVRLALIRIGIVLGKDGGAL-AKMIP-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 171 ~~~~~~~~~~~-~~~~~ilRp~~i~g~~~~~~-~~~~~-~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
+.....+..+. .+++..++||.+.++..... ..... .. ......|. ..+.+++|+|++++.+++.+...|
T Consensus 138 ~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dvA~~~~~l~~~~~~tG 211 (223)
T 3uce_A 138 EATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPV------GKVGEASDIAMAYLFAIQNSYMTG 211 (223)
T ss_dssp HHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTT------CSCBCHHHHHHHHHHHHHCTTCCS
T ss_pred HHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCC------CCccCHHHHHHHHHHHccCCCCCC
Confidence 76666665554 39999999999988742211 11111 11 11122222 347889999999999998665445
Q ss_pred -eEEeeCCCCC
Q 020476 247 -VINGTAPNPV 256 (325)
Q Consensus 247 -~~~~~~~~~~ 256 (325)
++++.+|..+
T Consensus 212 ~~i~vdgG~~~ 222 (223)
T 3uce_A 212 TVIDVDGGALL 222 (223)
T ss_dssp CEEEESTTGGG
T ss_pred cEEEecCCeec
Confidence 8888887644
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=160.40 Aligned_cols=220 Identities=14% Similarity=0.050 Sum_probs=150.3
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcc---cccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+ |+||+++++.|+++|++|++++|+.... ..+...........+|+.|++++.++++ ++
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 88 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPKF 88 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSSE
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999 9999999999999999999999987211 1110000001245689999988877664 68
Q ss_pred CEEEECCCCCCC-------CC-CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIG-------TR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~-~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|+||||||.... .+ ...+.++..+++|+.++.++++++.......+++|++||... +.. .+
T Consensus 89 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~ 157 (265)
T 1qsg_A 89 DGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA--ERA---------IP 157 (265)
T ss_dssp EEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------CT
T ss_pred CEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh--ccC---------CC
Confidence 999999997532 11 456678889999999999999998763112358999999765 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .++++++++||.++++........-... ......|+ ..+.+++|+|++
T Consensus 158 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~ 231 (265)
T 1qsg_A 158 NYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPI------RRTVTIEDVGNS 231 (265)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence 34567 7787777666555443 4899999999999987532211111111 11111222 236799999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
++.++..+. .+.++++.+|..+
T Consensus 232 v~~l~s~~~~~~tG~~~~vdgG~~~ 256 (265)
T 1qsg_A 232 AAFLCSDLSAGISGEVVHVDGGFSI 256 (265)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHhCchhcCccCCEEEECCCcCC
Confidence 999987533 3448888888644
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=161.78 Aligned_cols=236 Identities=15% Similarity=0.087 Sum_probs=148.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-----cccC----CCCCccccCceeecCCchhHhhhC---
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-----ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~----~~~~~~~~~~~d~~d~~~~~~~~~--- 85 (325)
+..++++||||+|+||++++++|+++|++|++.+|+.... ..+. ..........+|+.|.+++.++++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~ 82 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQII 82 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 3456899999999999999999999999999999974211 1000 000111244689999998887776
Q ss_pred ----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCcee
Q 020476 86 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 86 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
++|+||||||.... .....+.....+++|+.++.++++++ ++ .+.+++|++||... +...
T Consensus 83 ~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~--~~~g~iV~isS~~~--~~~~----- 153 (324)
T 3u9l_A 83 GEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRR--QKHGLLIWISSSSS--AGGT----- 153 (324)
T ss_dssp HHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC-----
T ss_pred HHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEecchh--ccCC-----
Confidence 79999999997532 33456778889999999999998887 55 46689999999876 3211
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc----ccchHHHH-HHHcCCCCCCCcc----
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGPLGSGQQ---- 221 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~----~~~~~~~~-~~~~~~~~~~~~~---- 221 (325)
.+....| .+|...+...+.+..+ .|+++++++||.+.++.... ........ ........+.+..
T Consensus 154 ---~~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (324)
T 3u9l_A 154 ---PPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLGEEIKKA 230 (324)
T ss_dssp ---CSSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHHHHHHHH
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCHHHHHHH
Confidence 1123457 7788777776666554 58999999999998653211 00001111 1111000000000
Q ss_pred ----eeeeccHHHHHHHHHHHHcCCCC-CceEEeeCCCCCCHHHHHHHH
Q 020476 222 ----WFSWIHLDDIVNLIYEALSNPSY-RGVINGTAPNPVRLAEMCDHL 265 (325)
Q Consensus 222 ----~~~~v~v~D~a~a~~~~~~~~~~-~~~~~~~~~~~~s~~e~~~~i 265 (325)
..+..+++|+|++++.++..+.. .....+.++....+..+.+.+
T Consensus 231 ~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~ 279 (324)
T 3u9l_A 231 FAAIVPPDADVSLVADAIVRVVGTASGKRPFRVHVDPAEDGADVGFSVL 279 (324)
T ss_dssp HHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEEEECTTCCSHHHHHHHH
T ss_pred HHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEEEeCCcchHHHHHHHHH
Confidence 01125789999999999988742 233334445445644444433
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.3e-21 Score=161.42 Aligned_cols=218 Identities=12% Similarity=0.065 Sum_probs=148.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC-CCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..|+|+||||+|+||++++++|+++|++|++++|+ ++....... .........+|+.|++++.++++ +
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999999999999999998 544322110 01111244579999998888776 7
Q ss_pred CCEEEECCCC-CCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--C---CCEEEEeeeeeeeecCCCCceec
Q 020476 87 STAVVNLAGT-PIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--V---RPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 87 ~d~vi~~a~~-~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~---~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
+|+|||+||. ... .....+.+...+++|+.++.++++++.... .+ . +++|++||... +..
T Consensus 86 id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~--~~~------- 156 (258)
T 3afn_B 86 IDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSIAG--HTG------- 156 (258)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCTHH--HHC-------
T ss_pred CCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecchhh--ccC-------
Confidence 9999999996 321 233456678889999999998887654210 11 2 68999998765 321
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
..+....| .+|...+.....+..+ .+++++++||+.++++..... ..+.. ....+.+ ...+++++|
T Consensus 157 -~~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~------~~~~~~~~d 227 (258)
T 3afn_B 157 -GGPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRD--RISNGIP------MGRFGTAEE 227 (258)
T ss_dssp -CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHH--HHHTTCT------TCSCBCGGG
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHH--HHhccCC------CCcCCCHHH
Confidence 11234467 7777776666555443 389999999999998753221 11111 1222222 235899999
Q ss_pred HHHHHHHHHcCC---C-CCceEEeeCCC
Q 020476 231 IVNLIYEALSNP---S-YRGVINGTAPN 254 (325)
Q Consensus 231 ~a~a~~~~~~~~---~-~~~~~~~~~~~ 254 (325)
+|++++.++.++ . .+.+|++.++.
T Consensus 228 va~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 228 MAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp THHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHhCcchhccccCCEEeECCCc
Confidence 999999999753 2 34488998875
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=160.24 Aligned_cols=217 Identities=17% Similarity=0.097 Sum_probs=151.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+...... ... .......+|+.|.+++.++++ ++
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 120 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGAL 120 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 458999999999999999999999999999999876543321 111 111244689999988776654 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+|||+||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||.....++ .+.
T Consensus 121 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~iV~isS~~~~~~~----------~~~ 188 (293)
T 3rih_A 121 DVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTA--SGRGRVILTSSITGPVTG----------YPG 188 (293)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHH--HSSCEEEEECCSBTTTBB----------CTT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEEeChhhccCC----------CCC
Confidence 999999997533 24467778899999999999998887 34 456899999997641122 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .|+++..++||.++++...... -... ......|++ .+...+|+|+++
T Consensus 189 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~--~~~~~~~~~~~p~~------r~~~p~dvA~~v 260 (293)
T 3rih_A 189 WSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMG--EEYISGMARSIPMG------MLGSPVDIGHLA 260 (293)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTC--HHHHHHHHTTSTTS------SCBCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhcc--HHHHHHHHhcCCCC------CCCCHHHHHHHH
Confidence 4467 7777776666555543 4899999999999987321110 1111 222222322 256889999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++.... .+.++++.+|..+
T Consensus 261 ~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 261 AFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhCccccCCCCCEEEECCCccC
Confidence 99997543 3458889888654
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=3.6e-20 Score=155.98 Aligned_cols=220 Identities=12% Similarity=0.024 Sum_probs=151.2
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
....++++||||+|+||++++++|+++|++|++++|+... .... ...........+|+.|.+++.++++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3445789999999999999999999999999999776532 1111 0111111245689999998887765
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++|++|||||.... .....+.++..+++|+.++..+++++.......+++|++||.... ++. .+..
T Consensus 108 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~-~~~---------~~~~ 177 (271)
T 3v2g_A 108 GGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAE-LVP---------WPGI 177 (271)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGT-CCC---------STTC
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhc-cCC---------CCCc
Confidence 79999999997533 234667788999999999999999887632345789999986541 110 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .++++..++||.|.++............ ....+. ..+...+|+|++++.
T Consensus 178 ~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~------~r~~~pedvA~~v~f 249 (271)
T 3v2g_A 178 SLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGDHAEAQ--RERIAT------GSYGEPQDIAGLVAW 249 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCSSHHHH--HHTCTT------SSCBCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccchhHHHH--HhcCCC------CCCCCHHHHHHHHHH
Confidence 467 7787776666555543 4899999999999987532222222211 122222 236789999999999
Q ss_pred HHcCCC---CCceEEeeCCC
Q 020476 238 ALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~ 254 (325)
++.... .+.++++.+|.
T Consensus 250 L~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 250 LAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HhCcccCCccCCEEEeCcCc
Confidence 986532 34488888774
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.85 E-value=4.1e-20 Score=156.60 Aligned_cols=226 Identities=17% Similarity=0.072 Sum_probs=151.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+...... ..........+|+.|++++.++++ +
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 105 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH 105 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 34568999999999999999999999999999999875432221 111112244689999988877664 7
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|++|||||.... .+...+.++..+++|+.++.++++++ ++ .+.+++|++||... +... ..
T Consensus 106 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~Iv~isS~~~--~~~~-------~~ 174 (283)
T 3v8b_A 106 LDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQ--RGGGAIVVVSSING--TRTF-------TT 174 (283)
T ss_dssp CCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCSBT--TTBC-------CS
T ss_pred CCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCceEEEEcChhh--ccCC-------CC
Confidence 9999999997422 34456778899999999999988887 44 45679999999765 2100 11
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcce--eeeccHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW--FSWIHLDDIV 232 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .++++..++||.+..+.......................... ..+...+|+|
T Consensus 175 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~~pedvA 254 (283)
T 3v8b_A 175 PGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPGRSEDVA 254 (283)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCBCHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCCCHHHHH
Confidence 234467 7787777666666554 489999999999988743221110010000000001111111 3467899999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++++.++.... .+.++++.+|.
T Consensus 255 ~~v~fL~s~~a~~itG~~i~vdGG~ 279 (283)
T 3v8b_A 255 ELIRFLVSERARHVTGSPVWIDGGQ 279 (283)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHcCccccCCcCCEEEECcCc
Confidence 99999997543 34478887763
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-20 Score=158.11 Aligned_cols=218 Identities=12% Similarity=0.042 Sum_probs=151.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+++|||||+|+||+++++.|+++|++|+++ .|+........ ..........+|+.|.+++.++++ ++
T Consensus 4 ~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 4 NKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999999999987 67654322211 111111245689999988877664 67
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +.. .+.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~ 150 (258)
T 3oid_A 84 DVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEK--NGGGHIVSISSLGS--IRY---------LEN 150 (258)
T ss_dssp CEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--TTCEEEEEEEEGGG--TSB---------CTT
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECchhh--CCC---------CCC
Confidence 999999986432 34456778889999999999888876 44 45679999999876 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++..++||.+.++........-... ......|. ..+.+++|+|+++
T Consensus 151 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~~~dva~~v 224 (258)
T 3oid_A 151 YTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPA------GRMVEIKDMVDTV 224 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTT------SSCBCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 4567 7787777766666554 3899999999999877422211111111 11122222 2478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++.... .+.++++.+|...
T Consensus 225 ~~L~s~~~~~itG~~i~vdGG~~~ 248 (258)
T 3oid_A 225 EFLVSSKADMIRGQTIIVDGGRSL 248 (258)
T ss_dssp HHHTSSTTTTCCSCEEEESTTGGG
T ss_pred HHHhCcccCCccCCEEEECCCccC
Confidence 99998654 3458999888643
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.85 E-value=4.8e-21 Score=159.12 Aligned_cols=215 Identities=15% Similarity=0.088 Sum_probs=145.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++|+||||+|+||++++++|+++|++|+++ .|++......... ........+|+.|++++.++++ ++|
T Consensus 2 k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 689999999999999999999999999995 6765433221100 0011134578999988887775 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|||+||.... .....+.+...+++|+.++.++++++.... .+.+++|++||.... ++. +....
T Consensus 82 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~-~~~----------~~~~~ 150 (244)
T 1edo_A 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-IGN----------IGQAN 150 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HCC----------TTCHH
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhc-CCC----------CCCcc
Confidence 99999997533 224566778899999999888888775410 256799999998651 331 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+..+ .+++++++|||.++++....... ... ......+. ..+++++|+|++++.+
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~--~~~~~~~~~~~~------~~~~~~~dva~~~~~l 222 (244)
T 1edo_A 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGE--DMEKKILGTIPL------GRTGQPENVAGLVEFL 222 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCH--HHHHHHHTSCTT------CSCBCHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcCh--HHHHHHhhcCCC------CCCCCHHHHHHHHHHH
Confidence 7 6777666555544443 58999999999998763211110 111 11112222 2478999999999999
Q ss_pred HcCCC----CCceEEeeCCC
Q 020476 239 LSNPS----YRGVINGTAPN 254 (325)
Q Consensus 239 ~~~~~----~~~~~~~~~~~ 254 (325)
+..+. .+.+|++.+|.
T Consensus 223 ~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 223 ALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHCSGGGGCCSCEEEESTTT
T ss_pred hCCCccCCcCCCEEEeCCCc
Confidence 85432 34488888774
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.2e-20 Score=159.40 Aligned_cols=217 Identities=14% Similarity=0.066 Sum_probs=146.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||++++++|+++|++|++++|+.++.... .... ......+|+.|.+++.++++ ++|
T Consensus 29 ~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (276)
T 2b4q_A 29 GRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELSARLD 107 (276)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 46899999999999999999999999999999986543221 1111 11245689999988877664 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCC----CCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGV----RPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~----~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+||||||.... .+...+.++..+++|+.++.++++++.... .+. +++|++||... +... +
T Consensus 108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~--~~~~---------~ 176 (276)
T 2b4q_A 108 ILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAG--ISAM---------G 176 (276)
T ss_dssp EEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGG--TCCC---------C
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHH--cCCC---------C
Confidence 99999997533 234566788999999999977766653210 233 78999999876 3211 1
Q ss_pred CCC-ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 160 SGN-DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 160 ~~~-~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
... .| .+|...+.....+..+ .++++++++||.+.++..... ......+......|. ..+.+.+|+|+
T Consensus 177 ~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~ 250 (276)
T 2b4q_A 177 EQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPM------GRWGRPEEMAA 250 (276)
T ss_dssp CSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTT------SSCCCHHHHHH
T ss_pred CCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCC------CCcCCHHHHHH
Confidence 233 67 7787776666555443 489999999999987742111 011111111002222 23789999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+++.++..+. .+.++++.+|.
T Consensus 251 ~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 251 LAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhCccccCCCCCEEEeCCCc
Confidence 9999997642 34488887774
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=155.79 Aligned_cols=210 Identities=14% Similarity=0.093 Sum_probs=146.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC---
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~--- 85 (325)
.++|+||||+|+||++++++|+++|+ +|++++|+.+....... ......+..+|+.|++++.++++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999999999999999 99999997654322110 01111244679999988887765
Q ss_pred ----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +..
T Consensus 82 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~-------- 151 (244)
T 2bd0_A 82 ERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA-------- 151 (244)
T ss_dssp HHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC--------
T ss_pred HhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh--cCC--------
Confidence 69999999997532 23456678889999999999988876321 035679999999876 431
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+....| .+|...+.....+.. ..+++++++|||.++++....... . . ...+++++|+|
T Consensus 152 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-----------~---~--~~~~~~~~dva 214 (244)
T 2bd0_A 152 -FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-----------E---M--QALMMMPEDIA 214 (244)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-----------T---T--GGGSBCHHHHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-----------c---c--cccCCCHHHHH
Confidence 1234457 677766655544333 358999999999999885322110 0 0 12579999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
++++.++..+. .++++...++..+
T Consensus 215 ~~~~~l~~~~~~~~~g~~~~~~~~~~~ 241 (244)
T 2bd0_A 215 APVVQAYLQPSRTVVEEIILRPTSGDI 241 (244)
T ss_dssp HHHHHHHTSCTTEEEEEEEEEETTCCC
T ss_pred HHHHHHHhCCccccchheEEecccccc
Confidence 99999998765 2235555554443
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-20 Score=153.10 Aligned_cols=215 Identities=15% Similarity=0.138 Sum_probs=145.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-------CCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-------~~~d~vi~ 92 (325)
.++++||||+|+||++++++|+++|++|++++|++++...... .....+|+.| +++.+++ .++|++||
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~----~~~~~~D~~~-~~~~~~~~~~~~~~g~id~lv~ 76 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAAQSLG----AVPLPTDLEK-DDPKGLVKRALEALGGLHVLVH 76 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHT----CEEEECCTTT-SCHHHHHHHHHHHHTSCCEEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhhC----cEEEecCCch-HHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999999999999998755211111 1244578888 7666554 37999999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
+||.... .....+.++..+++|+.++.++++++... ..+.+++|++||... +.... .+....| .+
T Consensus 77 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~~-------~~~~~~Y~~s 147 (239)
T 2ekp_A 77 AAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTT--FTAGG-------PVPIPAYTTA 147 (239)
T ss_dssp CCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSCCT-------TSCCHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhh--ccCCC-------CCCCccHHHH
Confidence 9997532 23456778899999999988888776321 035679999999876 43210 1234467 67
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+..+ .|++++++|||.+.++........-... ......|. ..+.+.+|+|++++.++..+
T Consensus 148 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dvA~~~~~l~s~~ 221 (239)
T 2ekp_A 148 KTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPM------GRWARPEEIARVAAVLCGDE 221 (239)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTT------SSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHHcCch
Confidence 77666655555443 4899999999999877421110000111 11111121 23789999999999998753
Q ss_pred C--CCc-eEEeeCCC
Q 020476 243 S--YRG-VINGTAPN 254 (325)
Q Consensus 243 ~--~~~-~~~~~~~~ 254 (325)
. ..| .+++.+|.
T Consensus 222 ~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 222 AEYLTGQAVAVDGGF 236 (239)
T ss_dssp GTTCCSCEEEESTTT
T ss_pred hcCCCCCEEEECCCc
Confidence 2 334 77777764
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-21 Score=159.41 Aligned_cols=204 Identities=11% Similarity=0.060 Sum_probs=146.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.|+++|+||||+|+||+++++.|+++|++|++++|+..+.... ...+|+.|.+++.++++ ++|+|
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~--------~~~~d~~d~~~v~~~~~~~~~~~g~iD~l 91 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADH--------SFTIKDSGEEEIKSVIEKINSKSIKVDTF 91 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSSE--------EEECSCSSHHHHHHHHHHHHTTTCCEEEE
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccc--------ceEEEeCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4557899999999999999999999999999999987653321 23467888887776654 57999
Q ss_pred EECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 91 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 91 i~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||||.... .....+.+...+++|+.++.++++++.......+++|++||... +.. .+....| .
T Consensus 92 i~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~ 160 (251)
T 3orf_A 92 VCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA--LNR---------TSGMIAYGA 160 (251)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred EECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh--ccC---------CCCCchhHH
Confidence 999996432 23345677888999999999999988752112358999999876 321 1233457 7
Q ss_pred HHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+.....+..+ .++++..++||.+.++. .... .. ......+++.+|+|++++.++.
T Consensus 161 sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~-------~~~~--~~------~~~~~~~~~~~dva~~i~~l~~ 225 (251)
T 3orf_A 161 TKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPT-------NRKY--MS------DANFDDWTPLSEVAEKLFEWST 225 (251)
T ss_dssp HHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHH-------HHHH--CT------TSCGGGSBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcc-------hhhh--cc------cccccccCCHHHHHHHHHHHhc
Confidence 788777777766665 58999999999887642 1110 11 1123457899999999999998
Q ss_pred C---CCC-CceEEeeCCCC
Q 020476 241 N---PSY-RGVINGTAPNP 255 (325)
Q Consensus 241 ~---~~~-~~~~~~~~~~~ 255 (325)
+ ... +.++++.+++.
T Consensus 226 ~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 226 NSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp CGGGCCCTTCEEEEEEETT
T ss_pred CccccCCcceEEEEecCCc
Confidence 8 333 44888877654
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.5e-21 Score=166.62 Aligned_cols=238 Identities=16% Similarity=0.092 Sum_probs=156.0
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCC---ccccCceeecCCchhHhhhC----
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKK---TRFFPGVMIAEEPQWRDCIQ---- 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~---~~~~~~~d~~d~~~~~~~~~---- 85 (325)
....++++||||+|+||+++++.|+++|++|++++|+.++...... ... ......+|+.|.+++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 102 (297)
T 1xhl_A 23 RFSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLA 102 (297)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHH
Confidence 3345689999999999999999999999999999998654322110 000 11244679999988877765
Q ss_pred ---CCCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceec
Q 020476 86 ---GSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 86 ---~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++|+||||||.... .....+.++..+++|+.++.++++++.... .+ +++|++||... +...
T Consensus 103 ~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~--~~~~------ 173 (297)
T 1xhl_A 103 KFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVA--GPQA------ 173 (297)
T ss_dssp HHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGG--SSSC------
T ss_pred hcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchh--ccCC------
Confidence 79999999997532 234566788899999999988877765420 34 79999999876 3211
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc--cchH--HHHHHHcCCCCCCCcceeeecc
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL--AKMI--PLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
.+....| .+|...+.....+.. ..|+++++++||.+.++..... .... ........ +........+.+
T Consensus 174 --~~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~p~~r~~~ 249 (297)
T 1xhl_A 174 --HSGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGS--RKECIPVGHCGK 249 (297)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHH--CTTTCTTSSCBC
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHH--HHhcCCCCCCcC
Confidence 0233457 677766665555443 3589999999999988631110 0000 00000000 000111234789
Q ss_pred HHHHHHHHHHHHcCC---C-CCceEEeeCCCCCCHHHHHHHHHH
Q 020476 228 LDDIVNLIYEALSNP---S-YRGVINGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 228 v~D~a~a~~~~~~~~---~-~~~~~~~~~~~~~s~~e~~~~i~~ 267 (325)
.+|+|++++.++..+ . .+.++++.+|..+...+.+..+.+
T Consensus 250 pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 293 (297)
T 1xhl_A 250 PEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMS 293 (297)
T ss_dssp HHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHH
T ss_pred HHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhh
Confidence 999999999999754 2 345888888876665554444443
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-21 Score=161.47 Aligned_cols=226 Identities=14% Similarity=0.050 Sum_probs=150.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
...++|+||||+|+||++++++|+++|++|++++|+..+....... .....+..+|+.|.+++.++++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 91 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLG 91 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcC
Confidence 3346899999999999999999999999999999976543211000 0011244679999888877664
Q ss_pred CCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|+|||+||..... ....+.+...+++|+.++.++++++.... ...+++|++||... +..... ......
T Consensus 92 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~~~~--~~~~~~ 167 (265)
T 1h5q_A 92 PISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQS--SLNGSL 167 (265)
T ss_dssp SEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEE--ETTEEC
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchh--hccccc--cccccc
Confidence 489999999975332 23566778889999999999988875410 12478999999865 321110 000111
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+...| .+|...+.....+..+ .+++++++|||.++++..... ..... ......++ ..+.+++|+|++
T Consensus 168 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~ 239 (265)
T 1h5q_A 168 TQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPL------NRFAQPEEMTGQ 239 (265)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTT------SSCBCGGGGHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHH--HHHhcCcc------cCCCCHHHHHHH
Confidence 23457 6777776666555443 489999999999998743221 11111 11112222 237899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
++.++.++. .+.+|++.+|..
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gG~~ 263 (265)
T 1h5q_A 240 AILLLSDHATYMTGGEYFIDGGQL 263 (265)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTGG
T ss_pred HHhhccCchhcCcCcEEEecCCEe
Confidence 999997642 345898988753
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=158.95 Aligned_cols=226 Identities=15% Similarity=0.059 Sum_probs=150.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|+++................+|+.|.+++.++++ ++|+||
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3568999999999999999999999999999999865433221110011245689999988877765 789999
Q ss_pred ECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .+...+.++..+++|+.++.++++++... ....+++|++||.... ++. +....| .
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~~Y~a 156 (270)
T 1yde_A 88 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA-IGQ----------AQAVPYVA 156 (270)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH-HCC----------TTCHHHHH
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCcccc-CCC----------CCCcccHH
Confidence 99996422 23355677889999999999998887531 0124799999997641 331 223457 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc----ccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA----LAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+|...+.....+..+ .++++++++||+++++.... .......+ ......|++ .+...+|+|++++.
T Consensus 157 sKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~------r~~~p~dva~~v~~ 230 (270)
T 1yde_A 157 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGAAAVF 230 (270)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCC------CCcCHHHHHHHHHH
Confidence 777666665555433 58999999999999863110 00111111 111122221 36789999999999
Q ss_pred HHcCCC--CCceEEeeCCCCCCHHHH
Q 020476 238 ALSNPS--YRGVINGTAPNPVRLAEM 261 (325)
Q Consensus 238 ~~~~~~--~~~~~~~~~~~~~s~~e~ 261 (325)
++.+.. .+.++++.+|..+.+...
T Consensus 231 L~s~~~~itG~~i~vdGG~~~~~~~~ 256 (270)
T 1yde_A 231 LASEANFCTGIELLVTGGAELGYGCK 256 (270)
T ss_dssp HHHHCTTCCSCEEEESTTTTSCC---
T ss_pred HcccCCCcCCCEEEECCCeecccCcC
Confidence 887532 344899998876665443
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=9e-21 Score=160.32 Aligned_cols=218 Identities=16% Similarity=0.131 Sum_probs=148.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+++....... .........+|+.|.+++.++++ ++|
T Consensus 22 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 101 (277)
T 2rhc_B 22 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD 101 (277)
T ss_dssp SCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999998654322110 01111244679999988877665 699
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--C--CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--P--EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||||||.... .....+.+...+++|+.++.++++++... . .+.+++|++||... +.. .+..
T Consensus 102 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~ 170 (277)
T 2rhc_B 102 VLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQG---------VVHA 170 (277)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGG--TSC---------CTTC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECcccc--ccC---------CCCC
Confidence 99999997532 23456677889999999999999987651 0 14579999999865 221 1233
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHH-------H-H-HHHcCCCCCCCcceeeecc
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIP-------L-F-MMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~-------~-~-~~~~~~~~~~~~~~~~~v~ 227 (325)
..| .+|...+.....+..+ .++++++++||.+.++....... ... . . ......+ ...+++
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~ 244 (277)
T 2rhc_B 171 APYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVP------IGRYVQ 244 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHST------TSSCBC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCC------CCCCcC
Confidence 457 6777666655554443 48999999999998763211000 000 0 0 0111112 234889
Q ss_pred HHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++|+|++++.++..+. .+.++++.+|.
T Consensus 245 ~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 245 PSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 9999999999997642 34488888874
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2e-20 Score=158.25 Aligned_cols=217 Identities=17% Similarity=0.074 Sum_probs=146.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccCCC-----CCccccCceeecCC----chhHhhhC----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPG-----KKTRFFPGVMIAEE----PQWRDCIQ---- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~~~-----~~~~~~~~~d~~d~----~~~~~~~~---- 85 (325)
.++++||||+|+||+++++.|+++|++|++++| +.+........ .....+..+|+.|. +++.++++
T Consensus 11 ~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 90 (276)
T 1mxh_A 11 CPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFR 90 (276)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHHH
Confidence 468999999999999999999999999999999 65432221100 01112446799999 87776664
Q ss_pred ---CCCEEEECCCCCCCC---CCCh-----------hhHHHHHHHhhHHHHHHHHHHhcCC-CCC------CCEEEEeee
Q 020476 86 ---GSTAVVNLAGTPIGT---RWSS-----------EIKKEIKESRIRVTSKVVDLINESP-EGV------RPSVLVSAT 141 (325)
Q Consensus 86 ---~~d~vi~~a~~~~~~---~~~~-----------~~~~~~~~~nv~~~~~ll~~~~~~~-~~~------~~~v~~Ss~ 141 (325)
++|+||||||..... .... +.+...+++|+.++.++++++.... .+. +++|++||.
T Consensus 91 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~ 170 (276)
T 1mxh_A 91 AFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDA 170 (276)
T ss_dssp HHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCG
T ss_pred hcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCCCCCCCcEEEEECch
Confidence 789999999975322 2233 6677899999999999999887632 122 689999998
Q ss_pred eeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCC
Q 020476 142 ALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLG 217 (325)
Q Consensus 142 ~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~ 217 (325)
.. +.. .+....| .+|...+.....+..+ .|+++++++||.++++ ......... ......+.+
T Consensus 171 ~~--~~~---------~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~--~~~~~~p~~ 236 (276)
T 1mxh_A 171 MT--DLP---------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQE--EYRRKVPLG 236 (276)
T ss_dssp GG--GSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHH--HHHTTCTTT
T ss_pred hh--cCC---------CCCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHH--HHHhcCCCC
Confidence 76 321 1233467 6777766666555443 4899999999999998 221111111 112222221
Q ss_pred CCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 218 SGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 218 ~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+++.+++|+|++++.++..+. .+.++++.+|..
T Consensus 237 -----r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 272 (276)
T 1mxh_A 237 -----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLI 272 (276)
T ss_dssp -----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred -----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCchh
Confidence 227899999999999997533 344888887743
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.6e-20 Score=158.09 Aligned_cols=219 Identities=15% Similarity=0.118 Sum_probs=151.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
...++++||||+|+||+++++.|+++|++|++++|+... ..... ..........+|+.|.+++.++++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g 105 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG 105 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 345689999999999999999999999999999985432 11111 011111245689999988877765
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|++|||||.... .....+.++..+++|+.++.++++++... ..+.+++|++||.... ++. +.
T Consensus 106 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~ 174 (269)
T 4dmm_A 106 RLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGE-MGN----------PG 174 (269)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHH-HCC----------TT
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhc-CCC----------CC
Confidence 78999999997533 23456778889999999998888876321 0355799999998762 221 22
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+..+ .|+++..++||.+.++..... .. .......++ ..+.+.+|+|++++
T Consensus 175 ~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~---~~-~~~~~~~p~------~r~~~~~dvA~~v~ 244 (269)
T 4dmm_A 175 QANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSEL---AA-EKLLEVIPL------GRYGEAAEVAGVVR 244 (269)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHH---HH-HHHGGGCTT------SSCBCHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccc---cH-HHHHhcCCC------CCCCCHHHHHHHHH
Confidence 4467 7777666655555443 489999999999988753221 11 112222222 24788999999999
Q ss_pred HHHcCCC----CCceEEeeCCCCCC
Q 020476 237 EALSNPS----YRGVINGTAPNPVR 257 (325)
Q Consensus 237 ~~~~~~~----~~~~~~~~~~~~~s 257 (325)
.++.++. .+.++++.+|..++
T Consensus 245 ~l~s~~~~~~itG~~i~vdGG~~~s 269 (269)
T 4dmm_A 245 FLAADPAAAYITGQVINIDGGLVMA 269 (269)
T ss_dssp HHHHCGGGGGCCSCEEEESTTSCCC
T ss_pred HHhCCcccCCCcCCEEEECCCeecC
Confidence 9998743 34589998886543
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.84 E-value=7.7e-21 Score=158.11 Aligned_cols=219 Identities=15% Similarity=0.074 Sum_probs=151.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++ ++|+
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 86 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI 86 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3456899999999999999999999999999999987554322111 0001144689999998887765 7999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
+|||||.... .+...+.++..+++|+.++.++++++... ..+.+++|++||.... ++ .+....|
T Consensus 87 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~-~~----------~~~~~~Y 155 (248)
T 3op4_A 87 LVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGT-MG----------NAGQANY 155 (248)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HC----------CTTCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhc-CC----------CCCChHH
Confidence 9999997533 23466778899999999999888876321 0345789999997652 22 1234567
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+ .|+++..++||.+..+.......- .........|. ..+.+++|+|+++..++.
T Consensus 156 ~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p~------~r~~~p~dva~~v~~L~s 228 (248)
T 3op4_A 156 AAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDE-QRTATLAQVPA------GRLGDPREIASAVAFLAS 228 (248)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHH-HHHHHHHTCTT------CSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHH-HHHHHHhcCCC------CCCcCHHHHHHHHHHHcC
Confidence 7777666555555443 489999999999987743222111 11112222222 347899999999999987
Q ss_pred CCC---CCceEEeeCCC
Q 020476 241 NPS---YRGVINGTAPN 254 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~ 254 (325)
... .+.++++.+|.
T Consensus 229 ~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 229 PEAAYITGETLHVNGGM 245 (248)
T ss_dssp GGGTTCCSCEEEESTTS
T ss_pred CccCCccCcEEEECCCe
Confidence 543 34488888875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.1e-20 Score=157.30 Aligned_cols=215 Identities=11% Similarity=0.051 Sum_probs=149.7
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
....++||||||+|+||+++++.|+++|++|++++|+........ ....+|+.|.+++.++++ ++|+
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 84 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVS------DHFKIDVTNEEEVKEAVEKTTKKYGRIDI 84 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CTTSS------EEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhccCce------eEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 344679999999999999999999999999999999876543211 144689999998877765 7999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+....|
T Consensus 85 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y 153 (269)
T 3vtz_A 85 LVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQS--YAA---------TKNAAAY 153 (269)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSB---------CTTCHHH
T ss_pred EEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--ccC---------CCCChhH
Confidence 9999997533 23356677888999999998887765421 035579999999876 432 1234467
Q ss_pred -HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcc--------cch-HHHH-HHHcCCCCCCCcceeeeccHHHH
Q 020476 165 -LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGAL--------AKM-IPLF-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~--------~~~-~~~~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
.+|...+.....+..+. ++++..++||.+.++..... ... .... ......+ ...+.+++|+
T Consensus 154 ~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedv 227 (269)
T 3vtz_A 154 VTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHP------MGRIGRPEEV 227 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHST------TSSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCC------CCCCcCHHHH
Confidence 77877777666665543 79999999999987631100 000 0011 1111112 2347899999
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCC
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
|++++.++.... .+.++++.+|.
T Consensus 228 A~~v~~L~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 228 AEVVAFLASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCCccCCCcCcEEEECCCc
Confidence 999999997543 34589998885
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.3e-20 Score=157.01 Aligned_cols=219 Identities=12% Similarity=0.065 Sum_probs=142.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC---CCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a 94 (325)
..++||||||+|+||+++++.|+++|++|++++|+.++....... ........+|+.+.+.+.++++ ++|+|||+|
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~A 92 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCNA 92 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEECC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 457899999999999999999999999999999987553332111 0011144578888888887775 689999999
Q ss_pred CCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 95 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
|.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +... +....| .+|.
T Consensus 93 g~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~~sK~ 161 (249)
T 3f9i_A 93 GITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVG--IAGN---------PGQANYCASKA 161 (249)
T ss_dssp C-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC----CC---------SCSHHHHHHHH
T ss_pred CCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHh--ccCC---------CCCchhHHHHH
Confidence 97532 22345667889999999988887766321 034578999999876 3211 234467 7777
Q ss_pred HHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--
Q 020476 169 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS-- 243 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~-- 243 (325)
..+.....+..+ .++++.+++||.+.++......... ........+ ...+.+++|+|++++.++.++.
T Consensus 162 a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~------~~~~~~~~dva~~~~~l~s~~~~~ 234 (249)
T 3f9i_A 162 GLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQ-REAIVQKIP------LGTYGIPEDVAYAVAFLASNNASY 234 (249)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHH-HHHHHHHCT------TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHH-HHHHHhcCC------CCCCcCHHHHHHHHHHHcCCccCC
Confidence 666655555443 4899999999999887432221110 011111112 2347889999999999997643
Q ss_pred -CCceEEeeCCCC
Q 020476 244 -YRGVINGTAPNP 255 (325)
Q Consensus 244 -~~~~~~~~~~~~ 255 (325)
.+.++++.+|..
T Consensus 235 ~tG~~~~vdgG~~ 247 (249)
T 3f9i_A 235 ITGQTLHVNGGML 247 (249)
T ss_dssp CCSCEEEESTTSS
T ss_pred ccCcEEEECCCEe
Confidence 345889988753
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.84 E-value=3.7e-21 Score=163.73 Aligned_cols=234 Identities=12% Similarity=0.011 Sum_probs=152.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----------------CCCCCccccCceeecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----------------FPGKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~~~d~~d~~~~~~~ 83 (325)
.+++|||||+|+||++++++|+++|++|++++|+....... ...........+|+.|.+++.++
T Consensus 10 gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 89 (287)
T 3pxx_A 10 DKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSRE 89 (287)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHH
Confidence 46899999999999999999999999999999873221100 00011112346799999888776
Q ss_pred hC-------CCCEEEECCCCCCC-CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceec
Q 020476 84 IQ-------GSTAVVNLAGTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 84 ~~-------~~d~vi~~a~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++ ++|+||||||.... .....+.+...+++|+.++.++++++........++|++||... +......+..
T Consensus 90 ~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~~~~~~~ 167 (287)
T 3pxx_A 90 LANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVAG--LIAAAQPPGA 167 (287)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHHH--HHHHHCCC--
T ss_pred HHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccchh--cccccccccc
Confidence 65 79999999997532 22456778899999999999999998764334568999999876 3322111222
Q ss_pred CCCC--CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH----------HHcCCCCCCC
Q 020476 156 ESSP--SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM----------MFAGGPLGSG 219 (325)
Q Consensus 156 e~~~--~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~----------~~~~~~~~~~ 219 (325)
+..+ ....| .+|...+.....+..+ .++++..++||.+.++....... ...+. .....+...
T Consensus 168 ~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 245 (287)
T 3pxx_A 168 GGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPM-YRQFRPDLEAPSRADALLAFPAMQ- 245 (287)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHH-HHHHCTTSSSCCHHHHHHHGGGGC-
T ss_pred cccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccch-hhhhccccccchhHHHHhhhhhhc-
Confidence 2222 12346 6777766666555554 38999999999999875322100 00000 000000011
Q ss_pred cceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 220 QQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 220 ~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
.....+.+++|+|++++.++.... .+.++++.+|..++
T Consensus 246 ~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~~~~ 286 (287)
T 3pxx_A 246 AMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGAMLK 286 (287)
T ss_dssp SSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGG
T ss_pred ccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchhhhc
Confidence 111468999999999999997543 34488998886543
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=2.3e-20 Score=156.98 Aligned_cols=220 Identities=15% Similarity=0.046 Sum_probs=147.7
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
....++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++
T Consensus 18 ~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 18 DLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 34457899999999999999999999999999999986543221100 0011134579999988877665
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|+||||||.... .....+.++..+++|+.++.++++++ ++ .+.+++|++||..+...+
T Consensus 98 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~~~~~---------- 165 (267)
T 1vl8_A 98 GKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRE--SDNPSIINIGSLTVEEVT---------- 165 (267)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--CSSCEEEEECCGGGTCCC----------
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCcEEEEECCcchhccC----------
Confidence 79999999997532 23456677889999999998887766 34 456899999998631111
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+....| .+|...+.....+..+ .|+++++++||.+.++.......--... ......+. ..+.+.+|+|
T Consensus 166 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA 239 (267)
T 1vl8_A 166 MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPL------GRTGVPEDLK 239 (267)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTT------SSCBCGGGGH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCC------CCCcCHHHHH
Confidence 1223457 6777766665555443 4899999999999876421110000111 11122222 2378899999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++++.++..+. .+.++++.+|.
T Consensus 240 ~~v~~l~s~~~~~itG~~i~vdGG~ 264 (267)
T 1vl8_A 240 GVAVFLASEEAKYVTGQIIFVDGGW 264 (267)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHcCccccCCcCCeEEECCCC
Confidence 99999997532 34477777764
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-20 Score=159.42 Aligned_cols=214 Identities=14% Similarity=0.097 Sum_probs=144.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++|+||||+|+||+++++.|+++|++|++++|++++..... ..........+|+.|.+++.++++ ++|
T Consensus 44 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~id 123 (285)
T 2c07_A 44 NKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNVD 123 (285)
T ss_dssp SCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 468999999999999999999999999999988765432211 111111244579999988887763 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||+||.... .....+.+...+++|+.++.++++++. + .+.+++|++||.... ++. +..
T Consensus 124 ~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~~~iv~isS~~~~-~~~----------~~~ 190 (285)
T 2c07_A 124 ILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN--NRYGRIINISSIVGL-TGN----------VGQ 190 (285)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH--HTCEEEEEECCTHHH-HCC----------TTC
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--CCCCEEEEECChhhc-cCC----------CCC
Confidence 99999997532 234566788899999999777766654 3 356799999998651 221 223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .++++++++||.+.++...... .... ......+. ..+++++|+|++++
T Consensus 191 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 191 ANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPA------GRMGTPEEVANLAC 262 (285)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTT------SSCBCHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHH--HHHhhCCC------CCCCCHHHHHHHHH
Confidence 457 6777666555544433 4899999999999887432211 1111 11112222 23789999999999
Q ss_pred HHHcCCC---CCceEEeeCCC
Q 020476 237 EALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~ 254 (325)
.++..+. .+.++++.+|.
T Consensus 263 ~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 263 FLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCCCCCEEEeCCCc
Confidence 9997643 34488888774
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.9e-20 Score=155.62 Aligned_cols=214 Identities=16% Similarity=0.107 Sum_probs=144.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||++++++|+++|++|++++| ++++..... ..........+|+.|++++.++++ ++
T Consensus 4 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 83 (246)
T 2uvd_A 4 GKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV 83 (246)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999999999999999999 543322111 001111244679999988887765 79
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.++..+++|+.++.++.++ +++ .+.+++|++||.... ++. +.
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~~-~~~----------~~ 150 (246)
T 2uvd_A 84 DILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMR--QRHGRIVNIASVVGV-TGN----------PG 150 (246)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCTHHH-HCC----------TT
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEECCHHhc-CCC----------CC
Confidence 999999997532 2345677888999999996665554 444 356799999998651 221 22
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+.. ..++++++++||.+.++...... ..... .....|. ..+.+.+|+|+++
T Consensus 151 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~--~~~~~p~------~~~~~~~dvA~~~ 222 (246)
T 2uvd_A 151 QANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAE--MLKLIPA------AQFGEAQDIANAV 222 (246)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHH--HHHTCTT------CSCBCHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHH--HHhcCCC------CCCcCHHHHHHHH
Confidence 3457 667665555444333 24899999999999876432211 11111 1112222 2378999999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++..+. .+.++++.+|.
T Consensus 223 ~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 223 TFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHcCchhcCCCCCEEEECcCc
Confidence 99997542 34488887774
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.6e-20 Score=154.84 Aligned_cols=212 Identities=16% Similarity=0.131 Sum_probs=145.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|++++..... ...+|+.|++++.++++ ++|+||
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-------~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 86 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVLV 86 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc-------CeeccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 3468999999999999999999999999999999875433221 14579999888877664 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .....+.++..+++|+.++.++++++... ..+.+++|++||.... ++. +....| .
T Consensus 87 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~~Y~~ 155 (247)
T 1uzm_A 87 SNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGL-WGI----------GNQANYAA 155 (247)
T ss_dssp EECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----------------CCHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhc-cCC----------CCChhHHH
Confidence 99997532 24456778899999999998888876421 0356799999998651 221 223457 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
+|...+.....+..+ .++++++++||.+.++....... ... ......+. ..+.+.+|+|++++.++..
T Consensus 156 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~--~~~~~~~~~~p~------~~~~~~~dvA~~~~~l~s~ 227 (247)
T 1uzm_A 156 SKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDE--RIQQGALQFIPA------KRVGTPAEVAGVVSFLASE 227 (247)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCH--HHHHHHGGGCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCH--HHHHHHHhcCCC------CCCcCHHHHHHHHHHHcCc
Confidence 777666555544443 48999999999997652111000 011 11111121 2378999999999999975
Q ss_pred CC---CCceEEeeCCCCC
Q 020476 242 PS---YRGVINGTAPNPV 256 (325)
Q Consensus 242 ~~---~~~~~~~~~~~~~ 256 (325)
+. .+.++++.+|..+
T Consensus 228 ~~~~~~G~~i~vdgG~~~ 245 (247)
T 1uzm_A 228 DASYISGAVIPVDGGMGM 245 (247)
T ss_dssp GGTTCCSCEEEESTTTTC
T ss_pred cccCCcCCEEEECCCccc
Confidence 32 3448888887543
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=3.5e-20 Score=157.76 Aligned_cols=220 Identities=12% Similarity=-0.009 Sum_probs=152.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+++|||||+|+||+++++.|+++|++|++++|+....... ...........+|+.|.+++.++++ ++
T Consensus 47 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 126 (291)
T 3ijr_A 47 GKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSL 126 (291)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999987532111 1111111244679999988877664 78
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|++|||||.... .....+.++..+++|+.++.++++++.......+++|++||... +... +....
T Consensus 127 D~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~ 195 (291)
T 3ijr_A 127 NILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA--YEGN---------ETLID 195 (291)
T ss_dssp CEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH--HHCC---------TTCHH
T ss_pred CEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh--cCCC---------CCChh
Confidence 999999996422 22366778899999999999999999874334568999999876 4321 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+ .++++..++||.++++....... -..... +........+.+++|+|++++.++
T Consensus 196 Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~-~~~~~~-----~~~~~p~~r~~~p~dvA~~v~~L~ 269 (291)
T 3ijr_A 196 YSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFD-EKKVSQ-----FGSNVPMQRPGQPYELAPAYVYLA 269 (291)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSC-HHHHHH-----TTTTSTTSSCBCGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCC-HHHHHH-----HHccCCCCCCcCHHHHHHHHHHHh
Confidence 7 7787777666655544 38999999999999873110000 000111 111222344788999999999999
Q ss_pred cCCC---CCceEEeeCCCCC
Q 020476 240 SNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~~ 256 (325)
.... .+.++++.+|..+
T Consensus 270 s~~~~~itG~~i~vdGG~~~ 289 (291)
T 3ijr_A 270 SSDSSYVTGQMIHVNGGVIV 289 (291)
T ss_dssp SGGGTTCCSCEEEESSSCCC
T ss_pred CCccCCCcCCEEEECCCccc
Confidence 7643 3448888887643
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=5.3e-20 Score=152.81 Aligned_cols=216 Identities=13% Similarity=0.057 Sum_probs=147.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|+.++......... .....+|+.|++++.++++ ++|+||
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lv 82 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDGVV 82 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC-CEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 45789999999999999999999999999999998654332211100 1244679999988877664 589999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .....+.++..+++|+.++.++.+++... ..+.+++|++||... ++. +....| .
T Consensus 83 n~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~----------~~~~~Y~a 150 (245)
T 1uls_A 83 HYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LGN----------LGQANYAA 150 (245)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GCC----------TTCHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccchh--cCC----------CCchhHHH
Confidence 99997532 23356678889999999998887766432 135678999999873 542 123457 6
Q ss_pred HHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccc-hHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 166 AEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAK-MIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 166 ~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
+|...+.....+.. ..|+++++++||.+..+....... ... ......+. ..+.+.+|+|++++.++..
T Consensus 151 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~~~dvA~~v~~l~s~ 222 (245)
T 1uls_A 151 SMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVRE--KAIAATPL------GRAGKPLEVAYAALFLLSD 222 (245)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHH--HHHHTCTT------CSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhhCCC------CCCcCHHHHHHHHHHHhCc
Confidence 66655544444333 248999999999998774322111 111 11112222 1378999999999999975
Q ss_pred CC---CCceEEeeCCCC
Q 020476 242 PS---YRGVINGTAPNP 255 (325)
Q Consensus 242 ~~---~~~~~~~~~~~~ 255 (325)
+. .+..+++.+|..
T Consensus 223 ~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 223 ESSFITGQVLFVDGGRT 239 (245)
T ss_dssp GGTTCCSCEEEESTTTT
T ss_pred hhcCCcCCEEEECCCcc
Confidence 42 344788877753
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=153.86 Aligned_cols=217 Identities=12% Similarity=0.048 Sum_probs=142.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-Ccccc-cCCCCCccccCceeecCCchhHhhh-------CCCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAEL-IFPGKKTRFFPGVMIAEEPQWRDCI-------QGSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~-~~~~~~~~~~~~~d~~d~~~~~~~~-------~~~d~ 89 (325)
..++++||||+|+||+++++.|+++|++|++++|++ +.... ............+|+.|++++.+++ .++|+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 85 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 85 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence 346899999999999999999999999999999987 43221 1100111123467999988887765 37999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
||||||.... .....+.++..+++|+.++.+++++ +++ .+.+++|++||... +... +...
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~ 152 (249)
T 2ew8_A 86 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR--NGWGRIINLTSTTY--WLKI---------EAYT 152 (249)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--GSCC---------SSCH
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCeEEEEEcchhh--ccCC---------CCch
Confidence 9999997532 2345667888999999997777666 555 45679999999876 4321 2334
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
.| .+|...+.....+..+ .++++++++||.+.++... .... ....... .+. .....+.+.+|+|++++.
T Consensus 153 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~--~~~~~~~--~~~--~~~~~~~~p~dva~~~~~ 226 (249)
T 2ew8_A 153 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALS--AMFDVLP--NML--QAIPRLQVPLDLTGAAAF 226 (249)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC----------------------CTT--SSSCSCCCTHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhcccc--chhhHHH--Hhh--CccCCCCCHHHHHHHHHH
Confidence 57 6777666665555443 4899999999999887422 1100 0000000 000 112347899999999999
Q ss_pred HHcCCC---CCceEEeeCCC
Q 020476 238 ALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~ 254 (325)
++..+. .+.++++.+|.
T Consensus 227 l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 227 LASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp HTSGGGTTCCSCEEEESSSC
T ss_pred HcCcccCCCCCcEEEECCCc
Confidence 997532 34478887774
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.84 E-value=7.3e-20 Score=155.48 Aligned_cols=218 Identities=12% Similarity=0.009 Sum_probs=148.8
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+ |+||+++++.|+++|++|++++|+... ...+...........+|+.|.+++.++++ ++
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 100 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGSL 100 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3689999999 999999999999999999999998641 11110000001245689999988877664 68
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
|+||||||.... .....+.+...+++|+.++.++++++.... ...+++|++||... +.. .+
T Consensus 101 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~ 169 (285)
T 2p91_A 101 DIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA--EKV---------VP 169 (285)
T ss_dssp CEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG--TSB---------CT
T ss_pred CEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh--ccC---------CC
Confidence 999999997531 144567788899999999999999887631 13379999999765 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .|+++++++||.+.++........-... ......|+ ..+.+++|+|++
T Consensus 170 ~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~------~~~~~~~dva~~ 243 (285)
T 2p91_A 170 HYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPF------GKPITIEDVGDT 243 (285)
T ss_dssp TTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTT------SSCCCHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCC------CCCcCHHHHHHH
Confidence 34567 7787776666555443 4899999999999988532221111111 11111222 136789999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++.++.... .+.+|++.++.
T Consensus 244 ~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 244 AVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp HHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHcCCcccCCCCCEEEECCCc
Confidence 999986532 34478888774
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=8.5e-20 Score=151.89 Aligned_cols=210 Identities=14% Similarity=0.061 Sum_probs=140.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh---CCCCEEEECC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI---QGSTAVVNLA 94 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~---~~~d~vi~~a 94 (325)
...++++||||+|+||+++++.|+++|++|++++|+++...... . .... +|+ .+++.+++ .++|+|||||
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~---~~~~-~D~--~~~~~~~~~~~~~iD~lv~~A 89 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSG-H---RYVV-CDL--RKDLDLLFEKVKEVDILVLNA 89 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTC-S---EEEE-CCT--TTCHHHHHHHSCCCSEEEECC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhC-C---eEEE-eeH--HHHHHHHHHHhcCCCEEEECC
Confidence 34578999999999999999999999999999999864332221 1 1133 676 34444444 4899999999
Q ss_pred CCCCC---CCCChhhHHHHHHHhhHHHHHH----HHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 95 GTPIG---TRWSSEIKKEIKESRIRVTSKV----VDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~nv~~~~~l----l~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|.... .+...+.+...+++|+.++..+ ++.+++ .+.+++|++||... +... +....| .+
T Consensus 90 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~~---------~~~~~Y~~s 156 (249)
T 1o5i_A 90 GGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE--KGWGRIVAITSFSV--ISPI---------ENLYTSNSA 156 (249)
T ss_dssp CCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSCC---------TTBHHHHHH
T ss_pred CCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEEcchHh--cCCC---------CCCchHHHH
Confidence 96533 2335667888999999886655 455555 46689999999877 4321 223456 66
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+..+ .++++++++||.+.++..... ..... .......+. ..+.+++|+|++++.++..+
T Consensus 157 K~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~-~~~~~~~p~------~~~~~~~dvA~~i~~l~s~~ 229 (249)
T 1o5i_A 157 RMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKK-KQVESQIPM------RRMAKPEEIASVVAFLCSEK 229 (249)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHH-HHHHTTSTT------SSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHH-HHHHhcCCC------CCCcCHHHHHHHHHHHcCcc
Confidence 76666555444432 589999999999998752111 01111 011111222 34789999999999998753
Q ss_pred C---CCceEEeeCCC
Q 020476 243 S---YRGVINGTAPN 254 (325)
Q Consensus 243 ~---~~~~~~~~~~~ 254 (325)
. .+.+|++.+|.
T Consensus 230 ~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 230 ASYLTGQTIVVDGGL 244 (249)
T ss_dssp GTTCCSCEEEESTTC
T ss_pred ccCCCCCEEEECCCc
Confidence 2 34488888875
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.2e-20 Score=158.32 Aligned_cols=228 Identities=12% Similarity=0.025 Sum_probs=145.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
|....++++||||+|+||++++++|+++|++|++++|+.++....... ........+|+.|.+++.++++ ++
T Consensus 5 m~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 5 MSLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 445567999999999999999999999999999999987654332211 0111245689999988877665 78
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C----CCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--E----GVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~----~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
|+||||||.... .....+.+...+++|+.++.++++++.... . ...++|++||... +..
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~~--~~~--------- 153 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTGA--GRP--------- 153 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTTT--TSC---------
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchhh--cCC---------
Confidence 999999997531 223566788899999999888877664310 1 1346999999865 321
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+....| .+|...+.....+..+ .++++..++||.+.++...... ...... ...+........+++++|+|
T Consensus 154 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~dva 229 (261)
T 3n74_A 154 RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEI----RKKFRDSIPMGRLLKPDDLA 229 (261)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------CTTSSCCCHHHHH
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHH----HHHHhhcCCcCCCcCHHHHH
Confidence 1223457 7777776666555554 4899999999999887422110 000000 00111222234588999999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCCCCH
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
++++.++.... .+.++++.+|..++-
T Consensus 230 ~~~~~l~s~~~~~itG~~i~vdgG~~~~~ 258 (261)
T 3n74_A 230 EAAAFLCSPQASMITGVALDVDGGRSIGG 258 (261)
T ss_dssp HHHHHHTSGGGTTCCSCEEEESTTTTC--
T ss_pred HHHHHHcCCcccCcCCcEEEecCCcccCC
Confidence 99999996433 345999999876654
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.84 E-value=4.3e-20 Score=155.38 Aligned_cols=220 Identities=14% Similarity=0.071 Sum_probs=146.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++||||+|+||+++++.|+++|++|++++|+.++....... ........+|+.|.+++.++++
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 356899999999999999999999999999999986543221100 1111234579999988887765
Q ss_pred CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHH----HHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVV----DLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll----~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|+||||||.... .....+.++..+++|+.++..+. ..+++ .+.+++|++||... +..
T Consensus 92 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~--------- 158 (267)
T 1iy8_A 92 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMRE--QGSGMVVNTASVGG--IRG--------- 158 (267)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSB---------
T ss_pred CCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCEEEEEcchhh--ccC---------
Confidence 68999999997532 23356678889999998877554 44444 45689999999875 321
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-----ccchHHH-H-HHHcCCCCCCCcceeeec
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-----LAKMIPL-F-MMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-----~~~~~~~-~-~~~~~~~~~~~~~~~~~v 226 (325)
.+....| .+|...+.....+..+ .|+++++++||.++++.... ....... . ......|. ..+.
T Consensus 159 ~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~ 232 (267)
T 1iy8_A 159 IGNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPS------KRYG 232 (267)
T ss_dssp CSSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTT------CSCB
T ss_pred CCCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCC------CCCc
Confidence 1223457 6777666555544433 48999999999998763110 0011110 0 11111121 2478
Q ss_pred cHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+.+|+|++++.++..+. .+.++++.+|..++
T Consensus 233 ~~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~~ 266 (267)
T 1iy8_A 233 EAPEIAAVVAFLLSDDASYVNATVVPIDGGQSAA 266 (267)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTTB
T ss_pred CHHHHHHHHHHHcCccccCCCCCEEEECCCcccC
Confidence 99999999999987542 34488888886543
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=2.9e-20 Score=155.82 Aligned_cols=222 Identities=13% Similarity=0.051 Sum_probs=145.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+. ....... ........+|+.|++++.++++ +
T Consensus 4 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 83 (260)
T 1x1t_A 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999998755 3221100 0011244679999988877765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+||||||.... .....+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+..
T Consensus 84 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~ 152 (260)
T 1x1t_A 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHG--LVA---------SANK 152 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHh--CcC---------CCCC
Confidence 9999999997532 23456778889999999988887776321 035679999999876 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHH-----HHHHcCCCC-CCCcceeeeccHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPL-----FMMFAGGPL-GSGQQWFSWIHLDD 230 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~-----~~~~~~~~~-~~~~~~~~~v~v~D 230 (325)
..| .+|...+.....+..+ .+++++.++||.+.++..... ...... ..... .+ ........+.+++|
T Consensus 153 ~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~p~~~~~~p~d 230 (260)
T 1x1t_A 153 SAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAAR--ELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC--------------------------CHHHHCTTCCCBCHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHH--HHhhccCCCCCCcCHHH
Confidence 467 6777666665554443 489999999999988742211 000000 00000 00 00011234789999
Q ss_pred HHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 231 IVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 231 ~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+|++++.++..+. .+.++++.+|.
T Consensus 231 va~~~~~l~s~~~~~~tG~~~~vdgG~ 257 (260)
T 1x1t_A 231 LGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhChhhcCCCCCEEEECCCc
Confidence 9999999997532 34488888774
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1.3e-20 Score=157.40 Aligned_cols=210 Identities=11% Similarity=-0.013 Sum_probs=142.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCc--ccccCCC--CCccccCceeecCC-chhHhhhC-------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSK--AELIFPG--KKTRFFPGVMIAEE-PQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~--~~~~~~~--~~~~~~~~~d~~d~-~~~~~~~~------- 85 (325)
..++++||||+|+||++++++|+++|++ |++++|+... ...+... .....+..+|+.|+ +++.++++
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4578999999999999999999999996 9999998642 1111100 00112345788888 77766654
Q ss_pred CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC---CCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP--EG---VRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~---~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|+||||||.. ..+.++..+++|+.++.++++++.... .+ .+++|++||... +... +.
T Consensus 84 ~id~lv~~Ag~~-----~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~ 147 (254)
T 1sby_A 84 TVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNAI---------HQ 147 (254)
T ss_dssp CCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSCC---------TT
T ss_pred CCCEEEECCccC-----CHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh--ccCC---------CC
Confidence 799999999964 345678899999999999988875321 11 357999999876 4311 22
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchH---HH-HHHHcCCCCCCCcceeeeccHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMI---PL-FMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
...| .+|...+.....+..+ .++++++++||.+.++.......+. .. ..... ...+.+++|+|
T Consensus 148 ~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~dvA 218 (254)
T 1sby_A 148 VPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLL---------SHPTQTSEQCG 218 (254)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHT---------TSCCEEHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHh---------cCCCCCHHHHH
Confidence 3467 6777776666555443 5899999999999986311110000 00 01111 11234899999
Q ss_pred HHHHHHHcCCCCCceEEeeCC
Q 020476 233 NLIYEALSNPSYRGVINGTAP 253 (325)
Q Consensus 233 ~a~~~~~~~~~~~~~~~~~~~ 253 (325)
++++.+++....+.+|++.+|
T Consensus 219 ~~i~~~~~~~~~G~~~~v~gG 239 (254)
T 1sby_A 219 QNFVKAIEANKNGAIWKLDLG 239 (254)
T ss_dssp HHHHHHHHHCCTTCEEEEETT
T ss_pred HHHHHHHHcCCCCCEEEEeCC
Confidence 999999976555558889887
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.5e-20 Score=155.56 Aligned_cols=227 Identities=15% Similarity=0.027 Sum_probs=154.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.+++|||||+|+||+++++.|+++|++|++++|+.+...... ..........+|+.|.+++.++++ ++|
T Consensus 8 gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 8 GKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999999999999999875432221 111112245689999988887765 799
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
++|||||.... ...+.+.+...+++|+.++.++++++... ..+.+++|++||... +.. ..+...
T Consensus 88 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~--------~~~~~~ 157 (280)
T 3tox_A 88 TAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVG--HTA--------GFAGVA 157 (280)
T ss_dssp EEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBT--TTB--------CCTTCH
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhh--CcC--------CCCCch
Confidence 99999996422 24466778899999999998888876431 034569999999876 310 112344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchH-HHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMI-PLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~-~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.| .+|...+.....+..+ .++++..++||.+.++.... ..... ... ......+ ...+.+++|+|+++
T Consensus 158 ~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~pedvA~~v 231 (280)
T 3tox_A 158 PYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHA------LKRIARPEEIAEAA 231 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTST------TSSCBCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCc------cCCCcCHHHHHHHH
Confidence 67 7787777666655554 48999999999999875321 10000 111 1111222 23478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCCCHHHHH
Q 020476 236 YEALSNPS---YRGVINGTAPNPVRLAEMC 262 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~s~~e~~ 262 (325)
+.++.++. .+.++++.+|..++..-+-
T Consensus 232 ~~L~s~~a~~itG~~i~vdGG~~~~~~a~~ 261 (280)
T 3tox_A 232 LYLASDGASFVTGAALLADGGASVTKAAEN 261 (280)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGGCC----
T ss_pred HHHhCccccCCcCcEEEECCCccccccccc
Confidence 99997643 3459999998766554333
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.7e-20 Score=154.50 Aligned_cols=217 Identities=16% Similarity=0.113 Sum_probs=149.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~ 92 (325)
.+++++||||+|+||+++++.|++ .|+.|++.+|+........ ....+|+.|.+++.++++ ++|++||
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~------~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~ 76 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL------KFIKADLTKQQDITNVLDIIKNVSFDGIFL 76 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE------EEEECCTTCHHHHHHHHHHTTTCCEEEEEE
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc------eEEecCcCCHHHHHHHHHHHHhCCCCEEEE
Confidence 356899999999999999999998 7899999998775221111 155689999998887775 7899999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
|||.... .+.+.+.++..+++|+.++.++++++.......+++|++||... +.. .+....| .+|.
T Consensus 77 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~--~~~---------~~~~~~Y~asKa 145 (244)
T 4e4y_A 77 NAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQC--FIA---------KPNSFAYTLSKG 145 (244)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGG--TCC---------CTTBHHHHHHHH
T ss_pred CCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHH--ccC---------CCCCchhHHHHH
Confidence 9997532 34466778889999999999999998763112258999999876 321 1223457 7787
Q ss_pred HHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC-------CCCCCcceeeeccHHHHHHHHHHH
Q 020476 169 CREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-------PLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 169 ~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
..+.....+.. ..|+++..++||.+.++... ..........+. ..........+.+++|+|++++.+
T Consensus 146 a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l 222 (244)
T 4e4y_A 146 AIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYR---NLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFL 222 (244)
T ss_dssp HHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHH---HHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCeEEEEEecCccCchhhH---HHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHH
Confidence 77766665554 35899999999999876311 111100000000 001111223478999999999999
Q ss_pred HcCCC---CCceEEeeCCCC
Q 020476 239 LSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~ 255 (325)
+.++. .+.++++.+|..
T Consensus 223 ~s~~~~~itG~~i~vdGG~~ 242 (244)
T 4e4y_A 223 LSDKSKFMTGGLIPIDGGYT 242 (244)
T ss_dssp HSGGGTTCCSCEEEESTTGG
T ss_pred hcCccccccCCeEeECCCcc
Confidence 97543 344888887743
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=156.83 Aligned_cols=223 Identities=17% Similarity=0.105 Sum_probs=147.8
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC------CCCE
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ------GSTA 89 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~------~~d~ 89 (325)
|....++++||||+|+||++++++|+++|++|++++|+.+....... ....+..+|+.|.+++.++++ ++|+
T Consensus 5 m~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~ 82 (257)
T 3tl3_A 5 MEIRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVADLG--DRARFAAADVTDEAAVASALDLAETMGTLRI 82 (257)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHTC--TTEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred ceecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHhcC--CceEEEECCCCCHHHHHHHHHHHHHhCCCCE
Confidence 44456789999999999999999999999999999996544322211 111245689999998887765 8999
Q ss_pred EEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCC----------CCCCCEEEEeeeeeeeecCCCCc
Q 020476 90 VVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESP----------EGVRPSVLVSATALGYYGTSETE 152 (325)
Q Consensus 90 vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~----------~~~~~~v~~Ss~~v~~~g~~~~~ 152 (325)
+|||||.... .....+.++..+++|+.++..+++++.... .+..++|++||... +...
T Consensus 83 lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~--- 157 (257)
T 3tl3_A 83 VVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIINTASVAA--FDGQ--- 157 (257)
T ss_dssp EEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEEECCCC----CCH---
T ss_pred EEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEEEcchhh--cCCC---
Confidence 9999996421 125677789999999999999988876421 12357999999876 3211
Q ss_pred eecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccH
Q 020476 153 VFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 153 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 228 (325)
+....| .+|...+.....+..+ .++++..++||.+..+.......-. ........+. ...+.+.
T Consensus 158 ------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~-~~~~~~~~~~-----~~r~~~p 225 (257)
T 3tl3_A 158 ------IGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEA-RASLGKQVPH-----PSRLGNP 225 (257)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHH-HHHHHHTSSS-----SCSCBCH
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHH-HHHHHhcCCC-----CCCccCH
Confidence 112356 6777666555544443 4899999999999887432211110 0111122222 0247899
Q ss_pred HHHHHHHHHHHcCCCCCc-eEEeeCCCCCC
Q 020476 229 DDIVNLIYEALSNPSYRG-VINGTAPNPVR 257 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~~~~-~~~~~~~~~~s 257 (325)
+|+|++++.+++++...| ++++.+|..++
T Consensus 226 ~dva~~v~~l~s~~~itG~~i~vdGG~~~~ 255 (257)
T 3tl3_A 226 DEYGALAVHIIENPMLNGEVIRLDGAIRMA 255 (257)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTC---
T ss_pred HHHHHHHHHHhcCCCCCCCEEEECCCccCC
Confidence 999999999998866555 88888886554
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=155.01 Aligned_cols=219 Identities=15% Similarity=0.050 Sum_probs=145.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||++++++|+++|++|++++|++++...... .........+|+.|.+++.++++ ++|
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD 81 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999999999999999998654322110 01111244679999988887775 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||+||.... .....+.++..+++|+.++.++++++.... .+ .+++|++||.... ++. +...
T Consensus 82 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~----------~~~~ 150 (256)
T 1geg_A 82 VIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGH-VGN----------PELA 150 (256)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGT-SCC----------TTBH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCC----------CCch
Confidence 99999996532 234566788899999999887776654310 23 5789999998651 221 2234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc---------hHHHH-HHHcCCCCCCCcceeeeccH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.| .+|...+.....+..+ .++++++++||.+.++....... .-... ......| ...+.+.
T Consensus 151 ~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~p 224 (256)
T 1geg_A 151 VYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRIT------LGRLSEP 224 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCT------TCSCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCC------CCCCcCH
Confidence 57 6777666555554443 48999999999998763110000 00000 0111111 1247899
Q ss_pred HHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 229 DDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+|+|++++.++..+. .+.++++.+|..
T Consensus 225 ~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (256)
T 1geg_A 225 EDVAACVSYLASPDSDYMTGQSLLIDGGMV 254 (256)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHHHHHHhCccccCCCCCEEEeCCCcc
Confidence 999999999997642 344888887753
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=158.88 Aligned_cols=220 Identities=14% Similarity=0.040 Sum_probs=149.4
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC------
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
|....++++||||+|+||++++++|+++|++|++++|+.+........ .....+..+|+.|.+.+.++++
T Consensus 30 ~~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 109 (279)
T 3ctm_A 30 FSLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDF 109 (279)
T ss_dssp GCCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHh
Confidence 334457899999999999999999999999999999987653221100 0011244679999888877765
Q ss_pred -CCCEEEECCCCCCC-C----CCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceec
Q 020476 86 -GSTAVVNLAGTPIG-T----RWSSEIKKEIKESRIRV----TSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-~----~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++|+|||+||.... . ....+.+...+++|+.+ ++.+++.+++ .+.+++|++||... +...
T Consensus 110 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~~iv~isS~~~--~~~~------ 179 (279)
T 3ctm_A 110 GTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKK--NGKGSLIITSSISG--KIVN------ 179 (279)
T ss_dssp SCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCCTT--SCC-------
T ss_pred CCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCeEEEECchHh--ccCC------
Confidence 49999999996532 1 33455677889999999 6677787776 56789999999865 3210
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
..+....| .+|...+.....+..+ .+ ++++++||.+.++...... .... ......+. ..+++++|
T Consensus 180 -~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~~~d 249 (279)
T 3ctm_A 180 -IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKA--KWWQLTPL------GREGLTQE 249 (279)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHH--HHHHHSTT------CSCBCGGG
T ss_pred -CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHH--HHHHhCCc------cCCcCHHH
Confidence 01223457 6787777666665554 36 9999999999877432111 1111 11111121 23789999
Q ss_pred HHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 231 IVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 231 ~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+|++++.++..+. .+.++++.+|..
T Consensus 250 vA~~~~~l~s~~~~~~tG~~i~vdgG~~ 277 (279)
T 3ctm_A 250 LVGGYLYLASNASTFTTGSDVVIDGGYT 277 (279)
T ss_dssp THHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHhCccccCccCCEEEECCCee
Confidence 9999999997532 344888888754
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.1e-20 Score=159.23 Aligned_cols=220 Identities=14% Similarity=0.085 Sum_probs=150.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.+++|||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 4689999999999999999999999999999998654332211 11112245689999998887765 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||||||.... .....+.++..+++|+.++.++.+++... ..+.+++|++||... +.. .+....
T Consensus 106 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~~~~~ 174 (271)
T 4ibo_A 106 ILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTS--ELA---------RATVAP 174 (271)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSB---------CTTCHH
T ss_pred EEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHh--CCC---------CCCchh
Confidence 99999997533 23466778889999999998886665431 034578999999765 211 123446
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
| .+|...+.....+..+ .|+++..++||.+.++........-... ......|. ..+.+++|+|++++.+
T Consensus 175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedva~~v~~L 248 (271)
T 4ibo_A 175 YTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPA------KRWGKPQELVGTAVFL 248 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTT------CSCBCGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCC------CCCcCHHHHHHHHHHH
Confidence 7 7777766666555543 5899999999999877421110000011 11112222 2367889999999999
Q ss_pred HcCCC---CCceEEeeCCCCC
Q 020476 239 LSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~~ 256 (325)
+.... .+.++++.+|...
T Consensus 249 ~s~~~~~itG~~i~vdGG~~~ 269 (271)
T 4ibo_A 249 SASASDYVNGQIIYVDGGMLS 269 (271)
T ss_dssp HSGGGTTCCSCEEEESTTGGG
T ss_pred hCccccCCCCcEEEECCCeec
Confidence 87543 3448899888644
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-20 Score=157.97 Aligned_cols=220 Identities=13% Similarity=0.058 Sum_probs=150.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|
T Consensus 28 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (270)
T 3ftp_A 28 KQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN 107 (270)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 45899999999999999999999999999999986543321110 0111244579999988877765 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
++|||||.... .....+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+....
T Consensus 108 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~ 176 (270)
T 3ftp_A 108 VLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVG--SAG---------NPGQVN 176 (270)
T ss_dssp EEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTBHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCC---------CCCchh
Confidence 99999997533 23456778889999999999988876421 034568999999876 321 122345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+ .|+++..++||.+..+.......- .........+ ...+.+.+|+|++++.++
T Consensus 177 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~p------~~r~~~pedvA~~v~~L~ 249 (270)
T 3ftp_A 177 YAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQE-QQTALKTQIP------LGRLGSPEDIAHAVAFLA 249 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHH-HHHHHHTTCT------TCSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHH-HHHHHHhcCC------CCCCCCHHHHHHHHHHHh
Confidence 7 7777666665555443 489999999999986521111000 0011122222 234789999999999998
Q ss_pred cCCC---CCceEEeeCCCCCC
Q 020476 240 SNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~~s 257 (325)
.... .+.++++.+|..+|
T Consensus 250 s~~~~~itG~~i~vdGG~~~s 270 (270)
T 3ftp_A 250 SPQAGYITGTTLHVNGGMFMS 270 (270)
T ss_dssp SGGGTTCCSCEEEESTTSSCC
T ss_pred CCCcCCccCcEEEECCCcccC
Confidence 6433 34589998886543
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.8e-20 Score=159.52 Aligned_cols=220 Identities=14% Similarity=0.076 Sum_probs=147.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---------CCCccccCceeecCCchhHhhhC-----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---------GKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---------~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.++|+||||+|+||++++++|+++|++|++++|+.++...... ......+..+|+.|.+++.++++
T Consensus 18 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 97 (303)
T 1yxm_A 18 GQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDT 97 (303)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999998654321100 01111244589999988887765
Q ss_pred --CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhc-C-CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S-PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+||||||.... .....+.+...+++|+.++.++++++.. . ..+.+++|++||... ++.
T Consensus 98 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~---------- 165 (303)
T 1yxm_A 98 FGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGF---------- 165 (303)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TCC----------
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cCC----------
Confidence 59999999996422 2345667788899999999999998654 1 023468999998763 331
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-CcccchHHH-H-HHHcCCCCCCCcceeeeccHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-GALAKMIPL-F-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-~~~~~~~~~-~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
+....| .+|...+.....+..+ .+++++++|||+++++.. ......... . ......+ ...+.+++|+
T Consensus 166 ~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p------~~~~~~~~dv 239 (303)
T 1yxm_A 166 PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIP------AKRIGVPEEV 239 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGST------TSSCBCTHHH
T ss_pred CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCc------ccCCCCHHHH
Confidence 223456 6666665555555443 389999999999999831 111110000 0 0011111 1237899999
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
|++++.++.... .+..+++.+|..++
T Consensus 240 A~~i~~l~~~~~~~~~G~~~~v~gG~~~~ 268 (303)
T 1yxm_A 240 SSVVCFLLSPAASFITGQSVDVDGGRSLY 268 (303)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred HHHHHHHhCcccccCCCcEEEECCCeecc
Confidence 999999997532 34488888886543
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=154.49 Aligned_cols=224 Identities=14% Similarity=0.018 Sum_probs=155.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||++++++|+++|++|++++|+++........ ........+|+.|.+++.++++ ++|++|
T Consensus 8 gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv 87 (255)
T 4eso_A 8 GKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDLLH 87 (255)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 46899999999999999999999999999999987654332211 0111244679999888776653 789999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
||||.... .....+.++..+++|+.++..+++++.......+++|++||... +.. .+....| .+|
T Consensus 88 ~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~asK 156 (255)
T 4eso_A 88 INAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVAD--EGG---------HPGMSVYSASK 156 (255)
T ss_dssp ECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGG--SSB---------CTTBHHHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhh--cCC---------CCCchHHHHHH
Confidence 99997533 23466778889999999999999998763122358999999876 321 1234467 778
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--c-cchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--L-AKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~-~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
...+.....+..+ .|+++..++||.+.++.... . ......+ ......|+ ..+.+.+|+|++++.++
T Consensus 157 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~L~ 230 (255)
T 4eso_A 157 AALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPM------KRNGTADEVARAVLFLA 230 (255)
T ss_dssp HHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTT------SSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCC------CCCcCHHHHHHHHHHHc
Confidence 7777666655554 38999999999999874321 1 1111111 11111222 23678999999999998
Q ss_pred cCCC--CCceEEeeCCCCCCHHH
Q 020476 240 SNPS--YRGVINGTAPNPVRLAE 260 (325)
Q Consensus 240 ~~~~--~~~~~~~~~~~~~s~~e 260 (325)
.+.. .+.++++.+|...++.+
T Consensus 231 s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 231 FEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HTCTTCCSCEEEESTTTTTTBCC
T ss_pred CcCcCccCCEEEECCCccccCcC
Confidence 7532 34489999987766543
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.6e-20 Score=153.70 Aligned_cols=221 Identities=14% Similarity=0.097 Sum_probs=150.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..+++|||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ +
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 98 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGG 98 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999986543321110 0111245689999998877765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|++|||||.... .+...+.++..+++|+.++..+++++.... . ..+++|++||... +.. .+.
T Consensus 99 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~ 167 (266)
T 4egf_A 99 LDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAA--LAP---------LPD 167 (266)
T ss_dssp CSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTT
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhh--ccC---------CCC
Confidence 9999999997533 234567788899999999988888764310 1 2468999999876 321 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++..++||.+..+...... .-..........|+ ..+.+.+|+|+++
T Consensus 168 ~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dva~~v 241 (266)
T 4egf_A 168 HYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPL------GRFAVPHEVSDAV 241 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTT------SSCBCHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCC------CCCcCHHHHHHHH
Confidence 4467 7777666666555543 4899999999999876311100 00011112222222 2367899999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++.... .+.++++.+|..+
T Consensus 242 ~~L~s~~~~~itG~~i~vdGG~~~ 265 (266)
T 4egf_A 242 VWLASDAASMINGVDIPVDGGYTM 265 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHhCchhcCccCcEEEECCCccC
Confidence 99997633 3448888887543
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.9e-20 Score=155.00 Aligned_cols=219 Identities=14% Similarity=-0.026 Sum_probs=146.2
Q ss_pred cCCeEEEECCCc-hHHHHHHHHHHhCCCeEEEEecCCCcccccC----CC-CCccccCceeecCCchhHhhhC-------
Q 020476 19 SQMTVSVTGATG-FIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PG-KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 19 ~~~~ilI~GatG-~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~-~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
..++++||||+| .||++++++|+++|++|++++|+.+...... .. .....+..+|+.|.+++.++++
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 346899999998 5999999999999999999999875432211 10 0112245689999988877664
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|+|||+||.... .....+.++..+++|+.++.++++++.... . +.+++|++||... +.. .+
T Consensus 101 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~--~~~---------~~ 169 (266)
T 3o38_A 101 RLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLG--WRA---------QH 169 (266)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGG--TCC---------CT
T ss_pred CCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHH--cCC---------CC
Confidence 68999999997533 234567788899999999999888765420 1 4567999998765 221 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|...+.....+..+ .++++..++||.+..+....... ..... .+........+.+.+|+|+++
T Consensus 170 ~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~-----~~~~~~~~~r~~~~~dva~~i 243 (266)
T 3o38_A 170 SQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSS-SELLD-----RLASDEAFGRAAEPWEVAATI 243 (266)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------------CCTTSSCCCHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCc-HHHHH-----HHHhcCCcCCCCCHHHHHHHH
Confidence 34567 7787777666655544 58999999999998764211100 00000 011122234578999999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++.... .+.++++.+|.
T Consensus 244 ~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 244 AFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHcCccccCccCCEEEEcCCc
Confidence 99997632 34488888774
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=152.64 Aligned_cols=222 Identities=14% Similarity=0.075 Sum_probs=148.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-------------ccc----cCCCCCccccCceeecCCchhHh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-------------AEL----IFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~----~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
.++++||||+|+||++++++|+++|++|++++|+.+. ... ............+|+.|.+++.+
T Consensus 15 gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 94 (280)
T 3pgx_A 15 GRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALRE 94 (280)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHH
Confidence 4689999999999999999999999999999985321 110 00111111234579999988887
Q ss_pred hhC-------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C-CCCCEEEEeeeeeeeecCC
Q 020476 83 CIQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E-GVRPSVLVSATALGYYGTS 149 (325)
Q Consensus 83 ~~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~-~~~~~v~~Ss~~v~~~g~~ 149 (325)
+++ ++|++|||||.... .+...+.++..+++|+.++.++++++.... . ..+++|++||... +..
T Consensus 95 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~- 171 (280)
T 3pgx_A 95 LVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGGSIVVVSSSAG--LKA- 171 (280)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSC-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEEcchhh--ccC-
Confidence 764 79999999997543 234567788899999999998888763210 2 2568999999876 321
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHH----HHcCCCCCCCcc
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFM----MFAGGPLGSGQQ 221 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~----~~~~~~~~~~~~ 221 (325)
.+....| .+|...+.....+..+ .|+++..++||.+.++..... .....+. .....+......
T Consensus 172 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 242 (280)
T 3pgx_A 172 --------TPGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPE-AMMEIFARHPSFVHSFPPMPVQP 242 (280)
T ss_dssp --------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHH-HHHHHHHHCGGGGGGSCCBTTBC
T ss_pred --------CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchh-hhhhhhhcCchhhhhhhhcccCC
Confidence 1223467 7777776666555554 589999999999998854321 1111110 011111111122
Q ss_pred eeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 222 WFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
. .+.+++|+|++++.++.... .+.++++.+|.
T Consensus 243 ~-r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 243 N-GFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp S-SCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred C-CCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 2 38999999999999997543 34488888774
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=153.58 Aligned_cols=221 Identities=15% Similarity=0.075 Sum_probs=152.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------C
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
...++++||||+|+||++++++|+++|++|++++|+.+....... .........+|+.|.+++.++++ +
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 109 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG 109 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 345789999999999999999999999999999998765433211 11111245689999998887775 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|++|||||.... .+...+.++..+++|+.++.++++++.... .+ .+++|++||... +.... .+.
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~--~~~~~-------~~~ 180 (276)
T 3r1i_A 110 IDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSG--HIINI-------PQQ 180 (276)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSCCC-------SSC
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHh--cccCC-------CCC
Confidence 9999999997533 234567788889999999988888764320 12 367999998765 22110 012
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+..+ .++++..++||.|..+...........+ ....|+ ..+...+|+|++++
T Consensus 181 ~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~--~~~~p~------~r~~~pedvA~~v~ 252 (276)
T 3r1i_A 181 VSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLADYHALW--EPKIPL------GRMGRPEELTGLYL 252 (276)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGGGHHHH--GGGSTT------SSCBCGGGSHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchHHHHHH--HhcCCC------CCCcCHHHHHHHHH
Confidence 3457 7787777666655554 5899999999999987543332222211 122222 23678999999999
Q ss_pred HHHcCCC---CCceEEeeCCCC
Q 020476 237 EALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~ 255 (325)
.++.... .+.++++.+|..
T Consensus 253 fL~s~~~~~itG~~i~vdGG~~ 274 (276)
T 3r1i_A 253 YLASAASSYMTGSDIVIDGGYT 274 (276)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHcCccccCccCcEEEECcCcc
Confidence 9997543 344888888753
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.83 E-value=8.8e-20 Score=154.39 Aligned_cols=218 Identities=17% Similarity=0.150 Sum_probs=139.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++||||+|+||+++++.|+++|++|++++|+... .... ........+..+|+.|.+++.++++ ++|
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 109 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRID 109 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 579999999999999999999999999999974322 2111 1111111245689999998887765 799
Q ss_pred EEEECCCCCC--C---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC---CCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 89 AVVNLAGTPI--G---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG---VRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 89 ~vi~~a~~~~--~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~---~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|||||... . .+...+.+...+++|+.++.++++++.... .+ .+++|++||... +.. .
T Consensus 110 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~---------~ 178 (280)
T 4da9_A 110 CLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVSA--VMT---------S 178 (280)
T ss_dssp EEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-----------------
T ss_pred EEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchhh--ccC---------C
Confidence 9999999721 1 234677788899999999988877764320 11 458999999876 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCC-CcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS-GQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .++++..++||.+.++...... .... ..... ......+.+++|+|+
T Consensus 179 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---~~~~----~~~~~~~~p~~r~~~pedvA~ 251 (280)
T 4da9_A 179 PERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---GKYD----GLIESGLVPMRRWGEPEDIGN 251 (280)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC-----------------------------CCBCHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---hhHH----HHHhhcCCCcCCcCCHHHHHH
Confidence 223457 7787777666655554 5899999999999877432110 0000 00001 122234788999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+++.++.... .+.++++.+|..+
T Consensus 252 ~v~~L~s~~~~~itG~~i~vdGG~~~ 277 (280)
T 4da9_A 252 IVAGLAGGQFGFATGSVIQADGGLSI 277 (280)
T ss_dssp HHHHHHTSTTGGGTTCEEEESTTCC-
T ss_pred HHHHHhCccccCCCCCEEEECCCccc
Confidence 9999998754 3448889888643
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=151.67 Aligned_cols=205 Identities=12% Similarity=0.053 Sum_probs=133.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhhC------CC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCIQ------GS 87 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~~------~~ 87 (325)
...++++||||+|+||+++++.|+++|++|++++|+.++....... ........+|+.|.+++.++++ ++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~i 84 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPL 84 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCE
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCc
Confidence 3457899999999999999999999999999999987654332211 1111245689999998887775 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.+...+++|+.++..+++++ ++ .+.+++|++||... +.. .+.
T Consensus 85 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~ 151 (252)
T 3h7a_A 85 EVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLA--HGQGKIFFTGATAS--LRG---------GSG 151 (252)
T ss_dssp EEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEEEEGGG--TCC---------CTT
T ss_pred eEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECCHHH--cCC---------CCC
Confidence 999999997533 24566778889999999988877765 33 34578999999876 221 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceE-EEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRL-ALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~-~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++ .++.||.+..+..... .+.. ........... +.+.+|+|+++
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~---~~~~----~~~~~~~~~~~-~~~pedvA~~~ 223 (252)
T 3h7a_A 152 FAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRER---REQM----FGKDALANPDL-LMPPAAVAGAY 223 (252)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-----------------------------------CCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhcc---chhh----hhhhhhcCCcc-CCCHHHHHHHH
Confidence 4457 6777666655555443 48999 8999999877632111 0000 00111112223 89999999999
Q ss_pred HHHHcCCC
Q 020476 236 YEALSNPS 243 (325)
Q Consensus 236 ~~~~~~~~ 243 (325)
+.+++++.
T Consensus 224 ~~l~s~~~ 231 (252)
T 3h7a_A 224 WQLYQQPK 231 (252)
T ss_dssp HHHHHCCG
T ss_pred HHHHhCch
Confidence 99998765
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.8e-20 Score=156.16 Aligned_cols=217 Identities=15% Similarity=0.057 Sum_probs=140.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++++||||+|+||++++++|+++|++|+++ .|+.+...... ..........+|+.|.+++.++++ ++
T Consensus 26 ~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 26 TPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp SCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4579999999999999999999999999887 44433322111 011111244679999888877664 78
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC-----CCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP-----EGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
|+||||||.... .....+.+...+++|+.++.++++++.... .+.+++|++||.... ++..
T Consensus 106 d~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~--------- 175 (272)
T 4e3z_A 106 DGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMAAI-LGSA--------- 175 (272)
T ss_dssp CEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTHHH-HCCT---------
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchHhc-cCCC---------
Confidence 999999997532 223567788899999999998888765420 134689999998762 2211
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .+++++.++||.+.++..... ..-... .... ......+.+++|+|+
T Consensus 176 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-~~~~~~~~~~~------~~~~~~~~~~edvA~ 248 (272)
T 4e3z_A 176 TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASG-GLPDRAREMAP------SVPMQRAGMPEEVAD 248 (272)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------------------CCTTSSCBCHHHHHH
T ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCccccc-CChHHHHHHhh------cCCcCCCcCHHHHHH
Confidence 122347 7777777665555443 389999999999998742210 000000 1111 112233678999999
Q ss_pred HHHHHHcCCC---CCceEEeeCC
Q 020476 234 LIYEALSNPS---YRGVINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~ 253 (325)
+++.++.... .+.+|++.+|
T Consensus 249 ~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 249 AILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHhCCccccccCCEEeecCC
Confidence 9999997543 3448888876
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.83 E-value=1.2e-19 Score=151.91 Aligned_cols=220 Identities=18% Similarity=0.089 Sum_probs=147.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc--ccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|+||++++++|+++|++|++++|+.+. ..... ..........+|+.|.+++.++++ +
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999998755 22111 111111244679999988877765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCC-CCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGV-RPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|+|||+||.... .....+.+...+++|+.++.++++++.... .+. +++|++||... +.. .+.
T Consensus 82 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~ 150 (258)
T 3a28_C 82 FDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAA--IQG---------FPI 150 (258)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGG--TSC---------CTT
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchh--ccC---------CCC
Confidence 9999999997532 234567788899999999988887765410 244 79999999876 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccch--------HHHH-HHHcCCCCCCCcceeeec
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKM--------IPLF-MMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~--------~~~~-~~~~~~~~~~~~~~~~~v 226 (325)
...| .+|...+.....+..+ .++++++++||.+..+.... .... -... ......| ...+.
T Consensus 151 ~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~ 224 (258)
T 3a28_C 151 LSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIA------LGRPS 224 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCT------TSSCB
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCC------CCCcc
Confidence 4467 6777666655554443 48999999999997652110 0000 0001 1111111 12378
Q ss_pred cHHHHHHHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.+|+|++++.++..+. .+.++++.+|..+
T Consensus 225 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~~ 257 (258)
T 3a28_C 225 VPEDVAGLVSFLASENSNYVTGQVMLVDGGMLY 257 (258)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESSSSCC
T ss_pred CHHHHHHHHHHHhCcccCCCCCCEEEECCCEec
Confidence 99999999999997642 3448888877543
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=1e-19 Score=153.10 Aligned_cols=217 Identities=17% Similarity=0.136 Sum_probs=147.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccC----CCCCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..+.++++||||+|+||++++++|+++|++|+++.++. ....... .......+..+|+.|.+++.++++
T Consensus 23 ~l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 23 NAMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 34556899999999999999999999999998766543 2221111 111111245679999988877765
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHh-----cCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLIN-----ESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~-----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+||||||.... .....+.+...+++|+.++.++++++. + .+.+++|++||.... ++.
T Consensus 103 g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~--~~~g~iv~isS~~~~-~~~-------- 171 (267)
T 4iiu_A 103 GAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGA--RQGGRIITLSSVSGV-MGN-------- 171 (267)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH--TSCEEEEEECCHHHH-HCC--------
T ss_pred CCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc--CCCcEEEEEcchHhc-cCC--------
Confidence 79999999997543 234567788899999999999988762 3 356799999997762 221
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|...+.....+..+ .++++..++||.+.++.......... ......+. ..+.+++|+|
T Consensus 172 --~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~--~~~~~~p~------~~~~~~edva 241 (267)
T 4iiu_A 172 --RGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEESALK--EAMSMIPM------KRMGQAEEVA 241 (267)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHHHHH--HHHHTCTT------CSCBCHHHHH
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHHHHH--HHHhcCCC------CCCcCHHHHH
Confidence 234457 6776555544444433 38999999999999875432211111 22222232 2367899999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++++.++.... .+.++++.+|.
T Consensus 242 ~~~~~L~s~~~~~itG~~i~vdGG~ 266 (267)
T 4iiu_A 242 GLASYLMSDIAGYVTRQVISINGGM 266 (267)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHhCCcccCccCCEEEeCCCc
Confidence 99999997533 34488887763
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.83 E-value=5.3e-20 Score=155.37 Aligned_cols=224 Identities=13% Similarity=0.001 Sum_probs=149.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|++|
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 108 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKLV 108 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987553332111 0111245689999988877664 789999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .+.+.+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+....| .
T Consensus 109 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~a 177 (277)
T 3gvc_A 109 ANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAG--QVA---------VGGTGAYGM 177 (277)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred ECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccC---------CCCchhHHH
Confidence 99997533 24467778899999999988887766421 035578999999865 221 1223467 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCC---CcceeeeccHHHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS---GQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~v~v~D~a~a~~~~~ 239 (325)
+|...+.....+..+ .|+++..++||.++++........... ........ ......+.+.+|+|++++.++
T Consensus 178 sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~---~~~~~~~~~~~~~~~~r~~~pedvA~~v~~L~ 254 (277)
T 3gvc_A 178 SKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDG---ALGAGGARSMIARLQGRMAAPEEMAGIVVFLL 254 (277)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC---------CCHHHHHHHHHSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchh---hHHHHhhhhhhhccccCCCCHHHHHHHHHHHc
Confidence 777666665554443 589999999999987631000000000 00000000 011134788999999999999
Q ss_pred cCCC---CCceEEeeCCCCCC
Q 020476 240 SNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 240 ~~~~---~~~~~~~~~~~~~s 257 (325)
.... .+.++++.+|...+
T Consensus 255 s~~a~~itG~~i~vdGG~~~~ 275 (277)
T 3gvc_A 255 SDDASMITGTTQIADGGTIAA 275 (277)
T ss_dssp SGGGTTCCSCEEEESTTGGGS
T ss_pred CCccCCccCcEEEECCcchhc
Confidence 7543 34489998886543
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=1.4e-19 Score=152.37 Aligned_cols=210 Identities=13% Similarity=0.087 Sum_probs=146.7
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC---CeEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhC------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..+++|+||||+|+||++++++|+++| ++|++++|+.+....+... .....+..+|+.|.+.+.++++
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 98 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT 98 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence 345789999999999999999999999 9999999987653322110 0011244689999998888776
Q ss_pred ---CCCEEEECCCCCC-C---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--C------C-----CCCEEEEeeeeeee
Q 020476 86 ---GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINESP--E------G-----VRPSVLVSATALGY 145 (325)
Q Consensus 86 ---~~d~vi~~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~------~-----~~~~v~~Ss~~v~~ 145 (325)
++|+||||||... . .....+.....+++|+.++.++++++.... . + .+++|++||...
T Consensus 99 g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~-- 176 (267)
T 1sny_A 99 KDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILG-- 176 (267)
T ss_dssp GGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGG--
T ss_pred CCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccCCCceEEEEecccc--
Confidence 7999999999753 1 334566778899999999999988875420 1 1 468999999876
Q ss_pred ecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcc
Q 020476 146 YGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQ 221 (325)
Q Consensus 146 ~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+.... ..+....| .+|...+.....+..+ .+++++++|||.+..+....
T Consensus 177 ~~~~~------~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~--------------------- 229 (267)
T 1sny_A 177 SIQGN------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS--------------------- 229 (267)
T ss_dssp CSTTC------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT---------------------
T ss_pred cccCC------CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC---------------------
Confidence 43211 11233457 6777776666555443 58999999999987653210
Q ss_pred eeeeccHHHHHHHHHHHHcCCC--CCceEEeeCCCCCC
Q 020476 222 WFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNPVR 257 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~~--~~~~~~~~~~~~~s 257 (325)
..++..+|+|+.++.++.... ..|.|...++..+.
T Consensus 230 -~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~g~~~~ 266 (267)
T 1sny_A 230 -SAPLDVPTSTGQIVQTISKLGEKQNGGFVNYDGTPLA 266 (267)
T ss_dssp -TCSBCHHHHHHHHHHHHHHCCGGGTTCEECTTSCBCC
T ss_pred -CCCCCHHHHHHHHHHHHHhcCcCCCCcEEccCCcCcC
Confidence 125788999999999997543 45655444454444
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.2e-20 Score=155.20 Aligned_cols=221 Identities=14% Similarity=0.075 Sum_probs=147.7
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cccC----CCCCccccCceeecCCchhHhhhC-----
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF----PGKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~----~~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
|....++|+||||+|+||++++++|+++|++|++++|+.... .... ..........+|+.|.+++.++++
T Consensus 25 m~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 104 (271)
T 4iin_A 25 MQFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQS 104 (271)
T ss_dssp CCCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHh
Confidence 334456899999999999999999999999999999965432 1111 011111244678889888877664
Q ss_pred --CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .
T Consensus 105 ~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~ 173 (271)
T 4iin_A 105 DGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIG--ERG---------N 173 (271)
T ss_dssp HSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------C
T ss_pred cCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhh--cCC---------C
Confidence 79999999997533 23456678889999999988877665321 035578999999876 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+....| .+|...+.....+..+ .++++..++||.+..+...... .... ...........+.+.+|+|++
T Consensus 174 ~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---~~~~----~~~~~~~~~~~~~~p~dvA~~ 246 (271)
T 4iin_A 174 MGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLK---DELK----ADYVKNIPLNRLGSAKEVAEA 246 (271)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC-------------------CGGGCTTCSCBCHHHHHHH
T ss_pred CCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhc---HHHH----HHHHhcCCcCCCcCHHHHHHH
Confidence 234567 7787777666655554 5899999999999876422111 0000 001111222347899999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~ 254 (325)
+..++..+. .+.++++.+|.
T Consensus 247 i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 247 VAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCCCcCCCcCCEEEeCCCe
Confidence 999997543 34488888774
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-20 Score=157.32 Aligned_cols=215 Identities=16% Similarity=0.122 Sum_probs=143.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||+|+||+++++.|+++|++|++++|+.++....... ........+|+.|.+++.++++ ++|+||
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 106 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDILV 106 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEEE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987554332111 1111244689999988877765 799999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||.... .....+.++..+++|+.++..+.+ .+++ .+.+++|++||.... ++. +....|
T Consensus 107 nnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~Iv~isS~~~~-~~~----------~~~~~Y 173 (266)
T 3grp_A 107 NNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMR--RRYGRIINITSIVGV-VGN----------PGQTNY 173 (266)
T ss_dssp ECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCC------------------CHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCcEEEEECCHHHc-CCC----------CCchhH
Confidence 99997533 234456788899999999555554 4444 456799999998762 221 123457
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+ .++++..++||.+.++.......- .........|+ ..+.+.+|+|++++.++.
T Consensus 174 ~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~-~~~~~~~~~p~------~r~~~~edvA~~v~~L~s 246 (266)
T 3grp_A 174 CAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEK-QKEAIMAMIPM------KRMGIGEEIAFATVYLAS 246 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHH-HHHHHHTTCTT------CSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHH-HHHHHHhcCCC------CCCcCHHHHHHHHHHHhC
Confidence 6777666555554443 489999999999987631111000 00112222222 347789999999999997
Q ss_pred CCC---CCceEEeeCCC
Q 020476 241 NPS---YRGVINGTAPN 254 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~ 254 (325)
... .+.++++.+|.
T Consensus 247 ~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 247 DEAAYLTGQTLHINGGM 263 (266)
T ss_dssp GGGTTCCSCEEEESTTC
T ss_pred ccccCccCCEEEECCCe
Confidence 543 34488888875
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.83 E-value=2.5e-20 Score=153.96 Aligned_cols=203 Identities=15% Similarity=0.095 Sum_probs=141.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---------~~d~v 90 (325)
.++++||||+|+||++++++|+++|++|++++|+++..... .....+|+.|.+++.++++ ++|+|
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADS------NILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSE------EEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccccc------cEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 46899999999999999999999999999999987653211 1244688888887776654 78999
Q ss_pred EECCCCCCCC----CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 91 VNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 91 i~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||||..... ....+.++..+++|+.++.++++++.......+++|++||... +.. .+....| .
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~ 145 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGP---------TPSMIGYGM 145 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh--ccC---------CCCcHHHHH
Confidence 9999975322 2235567888999999999998887652112358999999876 321 1233457 6
Q ss_pred HHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+.....+..+ .++++++++||.+.++. .... ... .....+++.+|+|++++..+.
T Consensus 146 sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~-------~~~~--~~~------~~~~~~~~~~dvA~~i~~~l~ 210 (236)
T 1ooe_A 146 AKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPM-------NRKW--MPN------ADHSSWTPLSFISEHLLKWTT 210 (236)
T ss_dssp HHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHH-------HHHH--STT------CCGGGCBCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcc-------hhhc--CCC------ccccccCCHHHHHHHHHHHHc
Confidence 777777666665544 36999999999987652 1100 000 011235778999999997763
Q ss_pred CCC----CCceEEeeCCC
Q 020476 241 NPS----YRGVINGTAPN 254 (325)
Q Consensus 241 ~~~----~~~~~~~~~~~ 254 (325)
.+. .+..+++.++.
T Consensus 211 s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 211 ETSSRPSSGALLKITTEN 228 (236)
T ss_dssp CGGGCCCTTCEEEEEEET
T ss_pred CCCcccccccEEEEecCC
Confidence 322 34477776654
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=154.22 Aligned_cols=220 Identities=12% Similarity=0.022 Sum_probs=153.5
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+| +||+++++.|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGSL 109 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 45899999998 99999999999999999999998643221110 00001245689999998887764 68
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .+...+.+...+++|+.++.++++++.......+++|++||... +.. .+.
T Consensus 110 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~--~~~---------~~~ 178 (296)
T 3k31_A 110 DFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA--EKV---------VPH 178 (296)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC---------CTT
T ss_pred CEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh--ccC---------CCC
Confidence 999999997531 34567788899999999999999998764233468999999876 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .++++..++||.+..+............ ......++ ..+...+|+|+++
T Consensus 179 ~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v 252 (296)
T 3k31_A 179 YNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPL------RRNTTLDDVGGAA 252 (296)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTT------SSCCCHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCC------CCCCCHHHHHHHH
Confidence 4567 7777776666555543 4899999999999987543222111111 11122222 2367889999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++.... .+.++++.+|..+
T Consensus 253 ~fL~s~~a~~itG~~i~vdGG~~~ 276 (296)
T 3k31_A 253 LYLLSDLGRGTTGETVHVDCGYHV 276 (296)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHcCCccCCccCCEEEECCCccc
Confidence 99997532 3448889888644
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=2.2e-20 Score=155.86 Aligned_cols=218 Identities=13% Similarity=0.083 Sum_probs=144.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||++++++|+++|++|++++|+.++....... ........+|+.|.+++.++++ ++|+|
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 346899999999999999999999999999999986543322110 0011244689999988877664 57999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .....+.+...+++|+.++..+.+ .+++ .+ +++|++||... +... +....
T Consensus 85 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~--~~-g~iv~isS~~~--~~~~---------~~~~~ 150 (253)
T 1hxh_A 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKE--TG-GSIINMASVSS--WLPI---------EQYAG 150 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--TC-EEEEEECCGGG--TSCC---------TTBHH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHH--cC-CEEEEEcchhh--cCCC---------CCCcc
Confidence 999997532 234566788899999887665544 5555 45 89999999876 4311 22345
Q ss_pred h-HHHHHHHHHHHHHhhc---C--CceEEEEEeceEEcCCCCc-c-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---K--DVRLALIRIGIVLGKDGGA-L-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~--~~~~~ilRp~~i~g~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
| .+|...+.....+..+ . +++++++|||.++++.... . ...... ...... .......+.+.+|+|+++
T Consensus 151 Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~--~~~~~~--~~~p~~~~~~~~dvA~~~ 226 (253)
T 1hxh_A 151 YSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKE--MVLHDP--KLNRAGRAYMPERIAQLV 226 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHH--HHBCBT--TTBTTCCEECHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHH--HHhhhh--ccCccCCCCCHHHHHHHH
Confidence 7 6777666655555443 3 8999999999999873111 0 000000 011100 011123478999999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++..+. .+..+++.+|.
T Consensus 227 ~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 227 LFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp HHHHSGGGTTCCSCEEEESSSC
T ss_pred HHHcCccccCCCCcEEEECCCc
Confidence 99997643 34478887774
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.5e-20 Score=151.83 Aligned_cols=213 Identities=17% Similarity=0.128 Sum_probs=143.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.+.++++||||+|+||++++++|+++|++|++++|++++... .....+|+.|++++.++++ ++|+|
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~-------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~l 91 (253)
T 2nm0_A 19 HMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG-------FLAVKCDITDTEQVEQAYKEIEETHGPVEVL 91 (253)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT-------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc-------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 345689999999999999999999999999999998754332 1245689999988877664 47999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY- 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y- 164 (325)
||+||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +... +....|
T Consensus 92 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~ 160 (253)
T 2nm0_A 92 IANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVG--LLGS---------AGQANYA 160 (253)
T ss_dssp EEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CCCH---------HHHHHHH
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhh--CCCC---------CCcHHHH
Confidence 999997532 22355677889999999998888765431 035679999999865 2210 112356
Q ss_pred HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 ~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+..+ .++++++++||.+..+...... .... ......+. ..+++.+|+|++++.++.
T Consensus 161 asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~i~~l~s 232 (253)
T 2nm0_A 161 ASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRA--NIVSQVPL------GRYARPEEIAATVRFLAS 232 (253)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHH--HHHTTCTT------CSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhC
Confidence 6676666555544432 5899999999998766321110 0111 11111121 247899999999999997
Q ss_pred CCC---CCceEEeeCCCCC
Q 020476 241 NPS---YRGVINGTAPNPV 256 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~~~ 256 (325)
.+. .+..+.+.+|..+
T Consensus 233 ~~~~~~tG~~i~vdGG~~~ 251 (253)
T 2nm0_A 233 DDASYITGAVIPVDGGLGM 251 (253)
T ss_dssp GGGTTCCSCEEEESTTTTC
T ss_pred ccccCCcCcEEEECCcccc
Confidence 643 3447888877543
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.7e-20 Score=154.18 Aligned_cols=229 Identities=14% Similarity=0.041 Sum_probs=151.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc------------ccc----CCCCCccccCceeecCCchhH
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------ELI----FPGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~~----~~~~~~~~~~~~d~~d~~~~~ 81 (325)
...+++|||||+|+||.++++.|+++|++|++++|+.... ... ...........+|+.|++++.
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 3457899999999999999999999999999999873210 000 000011124468999999888
Q ss_pred hhhC-------CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCC
Q 020476 82 DCIQ-------GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSET 151 (325)
Q Consensus 82 ~~~~-------~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~ 151 (325)
++++ ++|++|||||...... ..+.+...+++|+.++.++++++.... ...+++|++||.... ++..
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~~~~~-~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~-~~~~-- 166 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIAPMSA-GDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAGL-AGVG-- 166 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCCCCSS-THHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGT-SCCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCC-CHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHhc-CCCc--
Confidence 7765 7999999999764333 567888999999999999888764310 124689999998761 2211
Q ss_pred ceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc--chHHHHHHHcC--CCCCCCccee
Q 020476 152 EVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMIPLFMMFAG--GPLGSGQQWF 223 (325)
Q Consensus 152 ~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~ 223 (325)
...+....| .+|...+.....+..+ .++++..++||.|.++...... ........... ..+..... .
T Consensus 167 ----~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~ 241 (278)
T 3sx2_A 167 ----SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGAMGNAMP-V 241 (278)
T ss_dssp ----CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CTTSCSSS-C
T ss_pred ----cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhhhhhhcC-c
Confidence 011122357 6777666665555443 4799999999999988532210 11111111111 11233333 5
Q ss_pred eeccHHHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 224 SWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 224 ~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
.+.+++|+|++++.++.... .+.++++.+|..
T Consensus 242 ~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~~ 276 (278)
T 3sx2_A 242 EVLAPEDVANAVAWLVSDQARYITGVTLPVDAGFL 276 (278)
T ss_dssp SSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred CcCCHHHHHHHHHHHhCcccccccCCEEeECCCcc
Confidence 68999999999999997543 344888888753
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=158.42 Aligned_cols=225 Identities=15% Similarity=0.111 Sum_probs=144.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc----cCCC--CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL----IFPG--KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~----~~~~--~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||+|+||+++++.|+++|++|++++|+.++... +... ........+|+.|++++.++++ +
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (267)
T 2gdz_A 7 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 86 (267)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcCC
Confidence 3589999999999999999999999999999998654321 1110 0111234579999988877664 5
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHH----HHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVT----SKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~----~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+|||+||.. ..+.+...+++|+.++ +.+++.+++.. ...+++|++||... +... +..
T Consensus 87 id~lv~~Ag~~-----~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~ 150 (267)
T 2gdz_A 87 LDILVNNAGVN-----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMPV---------AQQ 150 (267)
T ss_dssp CCEEEECCCCC-----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSCC---------TTC
T ss_pred CCEEEECCCCC-----ChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc--cCCC---------CCC
Confidence 79999999964 2345678889998864 45555665410 01578999999876 4321 223
Q ss_pred Cch-HHHHHHHHHHHHH-----hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHc--CCCCCCCcceeeeccHHHHHH
Q 020476 162 NDY-LAEVCREWEGTAL-----KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFA--GGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~-----~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~v~D~a~ 233 (325)
..| .+|...+.....+ ....++++++++||.+.++........ ....... ...+........+++++|+|+
T Consensus 151 ~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~ 229 (267)
T 2gdz_A 151 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKE-ENMGQYIEYKDHIKDMIKYYGILDPPLIAN 229 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCH-HHHGGGGGGHHHHHHHHHHHCCBCHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccc-cccchhhhHHHHHHHHhccccCCCHHHHHH
Confidence 457 6776665554432 123589999999999977521110000 0000000 000000011234789999999
Q ss_pred HHHHHHcCCCCC-ceEEeeCCCCCCHHHH
Q 020476 234 LIYEALSNPSYR-GVINGTAPNPVRLAEM 261 (325)
Q Consensus 234 a~~~~~~~~~~~-~~~~~~~~~~~s~~e~ 261 (325)
+++.+++++... .++++.++..+++.|+
T Consensus 230 ~v~~l~s~~~~~G~~~~v~gg~~~~~~~~ 258 (267)
T 2gdz_A 230 GLITLIEDDALNGAIMKITTSKGIHFQDY 258 (267)
T ss_dssp HHHHHHHCTTCSSCEEEEETTTEEEECCC
T ss_pred HHHHHhcCcCCCCcEEEecCCCcccccCc
Confidence 999999876544 4999999887776553
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.82 E-value=8.4e-20 Score=154.48 Aligned_cols=218 Identities=12% Similarity=0.050 Sum_probs=148.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.+++|||||+|+||+++++.|+++|++|++++|+.+...... ..........+|+.|.+++.++++ ++|
T Consensus 24 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 24 PQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp -CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 358999999999999999999999999999999875433211 111111244679999988877664 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhc---C-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE---S-PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~---~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+||||||.... .....+.++..+++|+.++.++++++.. + ..+.+++|++||... +.. .+..
T Consensus 104 ~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~--~~~---------~~~~ 172 (279)
T 3sju_A 104 ILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGG--KQG---------VMYA 172 (279)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGG--TSC---------CTTC
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhh--ccC---------CCCC
Confidence 99999997533 3345667888999999999999887643 0 034578999999876 321 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc--------c-chHHHH-HHHcCCCCCCCcceeeecc
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL--------A-KMIPLF-MMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~--------~-~~~~~~-~~~~~~~~~~~~~~~~~v~ 227 (325)
..| .+|...+.....+..+ .|+++..++||.+.++..... . ..-... ......+ ...+.+
T Consensus 173 ~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p------~~r~~~ 246 (279)
T 3sju_A 173 APYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIP------LGRYST 246 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCT------TSSCBC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCC------CCCCCC
Confidence 467 7787666666555554 489999999999987521100 0 000111 1111222 234788
Q ss_pred HHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++|+|++++.++.... .+.++++.+|.
T Consensus 247 pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 247 PEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp HHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 9999999999997653 34488888875
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=151.60 Aligned_cols=223 Identities=13% Similarity=0.070 Sum_probs=146.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccc----cCCCCCccccCceeecCCchhHhhhC-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AEL----IFPGKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
...++++||||+|+||++++++|+++|++|+++.++... ... +...........+|+.|.+++.++++
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 85 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFG 85 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 345689999999999999999999999999998554332 211 11111112245689999998887765
Q ss_pred CCCEEEECCCCC-CC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeee-cCCCCceecCCCCC
Q 020476 86 GSTAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYY-GTSETEVFDESSPS 160 (325)
Q Consensus 86 ~~d~vi~~a~~~-~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~-g~~~~~~~~e~~~~ 160 (325)
++|++|||||.. .. .....+.+...+++|+.++.++++++.......+++|++||... + .. .+.
T Consensus 86 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~ 154 (259)
T 3edm_A 86 EIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAG--RDGG---------GPG 154 (259)
T ss_dssp SEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHCC---------STT
T ss_pred CCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHh--ccCC---------CCC
Confidence 789999999864 11 34456678889999999999999998763112348999999876 3 21 123
Q ss_pred CCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
...| .+|...+.....+..+. ++++..+.||.+..+....... +.. ...+........+.+++|+|++++.
T Consensus 155 ~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~--~~~----~~~~~~~~p~~r~~~pedva~~v~~ 228 (259)
T 3edm_A 155 ALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTK--PEV----RERVAGATSLKREGSSEDVAGLVAF 228 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------------CCBCHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccC--hHH----HHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 4467 77877776665555442 4999999999998764221100 000 0011122233457889999999999
Q ss_pred HHcCCC---CCceEEeeCCCCCC
Q 020476 238 ALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 238 ~~~~~~---~~~~~~~~~~~~~s 257 (325)
++.... .+.++++.+|...+
T Consensus 229 L~s~~~~~itG~~i~vdGg~~~~ 251 (259)
T 3edm_A 229 LASDDAAYVTGACYDINGGVLFS 251 (259)
T ss_dssp HHSGGGTTCCSCEEEESBCSSBC
T ss_pred HcCccccCccCCEEEECCCcCCC
Confidence 997643 34588888886443
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.7e-19 Score=151.69 Aligned_cols=220 Identities=9% Similarity=0.019 Sum_probs=151.2
Q ss_pred cCCeEEEECCCch--HHHHHHHHHHhCCCeEEEEecCCCcccccC---CC-CC-ccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELIF---PG-KK-TRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~-~~-~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..++++||||+|+ ||.+++++|+++|++|++++|+........ .. .. ......+|+.|.+++.++++
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3568999999998 999999999999999999999754322111 00 00 11245689999998887764
Q ss_pred -CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++||+||.... .....+.....+++|+.++.++++++.......+++|++||... +..
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~--------- 154 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGG--ELV--------- 154 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG--TSC---------
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecccc--ccc---------
Confidence 68999999997531 23456677889999999999999998864333468999999876 321
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+....| .+|...+.....+..+ .|+++..++||.+..+............ ......+. ..+.+.+|+|
T Consensus 155 ~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~p~dva 228 (266)
T 3oig_A 155 MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPL------RRTTTPEEVG 228 (266)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTT------SSCCCHHHHH
T ss_pred CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCC------CCCCCHHHHH
Confidence 1234457 6777666665555443 4899999999999886432221111111 11111122 2367899999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
++++.++.... .+.++++.+|..
T Consensus 229 ~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 229 DTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHcCCchhcCcCCEEEECCCeE
Confidence 99999997533 344888888754
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=154.04 Aligned_cols=218 Identities=14% Similarity=0.074 Sum_probs=151.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc--cccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|||||+|+||++++++|+++|++|++++|+.+. .... ...........+|+.|.+++.++++ +
T Consensus 49 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 128 (294)
T 3r3s_A 49 DRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGG 128 (294)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999999999999999887432 1111 0011112245689999888776664 7
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|++||+||.... .+...+.+...+++|+.++.++++++........++|++||... +... +...
T Consensus 129 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~--~~~~---------~~~~ 197 (294)
T 3r3s_A 129 LDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQA--YQPS---------PHLL 197 (294)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGG--TSCC---------TTCH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhh--ccCC---------CCch
Confidence 8999999997432 23467778899999999999999998764333458999999876 4321 2344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC---CcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG---GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.| .+|...+.....+..+ .|+++..++||.|.++.. ....... ..+........+...+|+|+++
T Consensus 198 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~--------~~~~~~~p~~r~~~p~dvA~~v 269 (294)
T 3r3s_A 198 DYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKI--------PQFGQQTPMKRAGQPAELAPVY 269 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGS--------TTTTTTSTTSSCBCGGGGHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHH--------HHHHhcCCCCCCcCHHHHHHHH
Confidence 57 7787777666655544 389999999999987631 0000000 0111222233477899999999
Q ss_pred HHHHcCCC---CCceEEeeCCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+.++.... .+.++++.+|..+
T Consensus 270 ~~L~s~~~~~itG~~i~vdGG~~l 293 (294)
T 3r3s_A 270 VYLASQESSYVTAEVHGVCGGEHL 293 (294)
T ss_dssp HHHHSGGGTTCCSCEEEESTTCCC
T ss_pred HHHhCccccCCCCCEEEECCCccC
Confidence 99997543 3459999988654
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-20 Score=153.96 Aligned_cols=219 Identities=14% Similarity=0.129 Sum_probs=150.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+.++...... .........+|+.|.+++.++++ ++|
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (264)
T 3ucx_A 11 DKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRVD 90 (264)
T ss_dssp TCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCCS
T ss_pred CcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCc
Confidence 4689999999999999999999999999999998654332211 11111245689999998877764 789
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
++|||||.... .....+.+...+++|+.++.++++++... ....+++|++||... +.. .+....
T Consensus 91 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~ 159 (264)
T 3ucx_A 91 VVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESKGAVVNVNSMVV--RHS---------QAKYGA 159 (264)
T ss_dssp EEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHTCEEEEECCGGG--GCC---------CTTCHH
T ss_pred EEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEECcchh--ccC---------CCccHH
Confidence 99999986311 34456778889999999999988876431 012279999999876 321 123346
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc---------hHHHH-HHHcCCCCCCCcceeeeccHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK---------MIPLF-MMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~---------~~~~~-~~~~~~~~~~~~~~~~~v~v~ 229 (325)
| .+|...+.....+..+ .++++..++||.|+++....... .-... .... ......+.+++
T Consensus 160 Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~p~~r~~~p~ 233 (264)
T 3ucx_A 160 YKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAA------GSDLKRLPTED 233 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHT------TSSSSSCCBHH
T ss_pred HHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhc------cCCcccCCCHH
Confidence 7 7787776666655554 58999999999998763211000 00001 1111 12233478999
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
|+|++++.++.... .+.++++.+|..
T Consensus 234 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 262 (264)
T 3ucx_A 234 EVASAILFMASDLASGITGQALDVNCGEY 262 (264)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTSS
T ss_pred HHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 99999999997533 345889988864
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.6e-19 Score=152.98 Aligned_cols=219 Identities=10% Similarity=0.045 Sum_probs=149.9
Q ss_pred CCeEEEECCCch--HHHHHHHHHHhCCCeEEEEecCC--CcccccCCCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+ ||.++++.|+++|++|++++|+. +....+........+..+|+.|.+++.++++ ++|
T Consensus 26 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (280)
T 3nrc_A 26 GKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDGLD 105 (280)
T ss_dssp TCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSSCC
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999977 99999999999999999999987 2222221111112245689999988877664 579
Q ss_pred EEEECCCCCCCC--------CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 89 AVVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 89 ~vi~~a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+||||||..... ....+.+...+++|+.++.++++++... .....++|++||... +.. .+
T Consensus 106 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~ 174 (280)
T 3nrc_A 106 AIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYIGA--EKA---------MP 174 (280)
T ss_dssp EEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECGGG--TSC---------CT
T ss_pred EEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecccc--ccC---------CC
Confidence 999999975321 1566778889999999999998887642 123578999999876 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .++++..++||.+..+............ ......+. ..+...+|+|++
T Consensus 175 ~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~pedvA~~ 248 (280)
T 3nrc_A 175 SYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPL------KKNVDIMEVGNT 248 (280)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTT------CSCCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCC------CCCCCHHHHHHH
Confidence 34467 6777666665554443 5899999999999987432221111111 11111222 236789999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
++.++.... .+.++++.+|..
T Consensus 249 v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 249 VAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp HHHTTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhCcccCCcCCcEEEECCCcc
Confidence 999987532 344888888764
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-20 Score=156.39 Aligned_cols=230 Identities=13% Similarity=0.051 Sum_probs=155.1
Q ss_pred hhcCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhC------
Q 020476 17 QASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 17 ~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
....++|+||||+ |+||++++++|+++|++|++++|+........ .......+..+|+.|.+++.++++
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3456799999999 99999999999999999999999853322111 000111255789999998887765
Q ss_pred -CCCEEEECCCCCCC-------C-CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG-------T-RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-------~-~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|++|||||.... . ....+.+...+++|+.++.++++++.......+++|++||... +..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~--~~~-------- 160 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA--ERA-------- 160 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB--------
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEecccc--ccC--------
Confidence 67999999997532 1 2567788899999999999999998763122458999999876 321
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
.+....| .+|...+.....+..+ .++++..++||.+..+........-... ......++ ..+...+|+
T Consensus 161 -~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~------~~~~~pedv 233 (271)
T 3ek2_A 161 -IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPL------KRNVTIEQV 233 (271)
T ss_dssp -CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTT------SSCCCHHHH
T ss_pred -CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCc------CCCCCHHHH
Confidence 2234567 6777776666555543 4899999999999987533221111111 11111222 236789999
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCCCCCHHHHHH
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPNPVRLAEMCD 263 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~~~s~~e~~~ 263 (325)
|++++.++.... .+.++++.+|..+++.++.+
T Consensus 234 a~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 234 GNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred HHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 999999997532 34499999998777766544
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=147.92 Aligned_cols=198 Identities=19% Similarity=0.173 Sum_probs=139.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++++||||+|+||++++++|+++|++|++++|+.++....... .....+..+|+.|.+++.++++ ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 81 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV 81 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999999999999986543221110 1111244689999998888776 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|++|||||.... .+...+.+...+++|+.++.++++++... ..+.+++|++||.... ++ .+....
T Consensus 82 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~-~~----------~~~~~~ 150 (235)
T 3l77_A 82 DVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSA-RL----------IPYGGG 150 (235)
T ss_dssp SEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS-SC----------CTTCHH
T ss_pred CEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhc-cc----------CCCcch
Confidence 999999997533 23366778889999999999988887431 0134577788776551 22 122345
Q ss_pred h-HHHHHHHHHHHHHhh-cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 164 Y-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~-~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
| .+|...+.....+.. ..++++..++||.+..+...... .......++..+|+|++++.++++
T Consensus 151 Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~---------------~~~~~~~~~~p~dva~~v~~l~~~ 215 (235)
T 3l77_A 151 YVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKP---------------GKPKEKGYLKPDEIAEAVRCLLKL 215 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCS---------------CCCGGGTCBCHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccC---------------CcccccCCCCHHHHHHHHHHHHcC
Confidence 7 677766665555433 34899999999998765321110 011112478999999999999988
Q ss_pred CC
Q 020476 242 PS 243 (325)
Q Consensus 242 ~~ 243 (325)
+.
T Consensus 216 ~~ 217 (235)
T 3l77_A 216 PK 217 (235)
T ss_dssp CT
T ss_pred CC
Confidence 76
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=151.42 Aligned_cols=221 Identities=12% Similarity=0.049 Sum_probs=147.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||++++++|+++|++|++++|+.... .. .........+..+|+.|.+++.++++ ++
T Consensus 25 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 104 (269)
T 3gk3_A 25 KRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKV 104 (269)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 35799999999999999999999999999998554321 11 11111111245689999988877665 79
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+...
T Consensus 105 d~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 173 (269)
T 3gk3_A 105 DVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNG--SRG---------AFGQA 173 (269)
T ss_dssp SEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHC---------CTTBH
T ss_pred CEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhh--ccC---------CCCcc
Confidence 999999997533 23456778889999999988888776321 034578999999866 321 12234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+ .++++..++||.+..+....... .. ....+........+.+++|+|++++.+
T Consensus 174 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~---~~---~~~~~~~~~~~~~~~~p~dvA~~v~~L 247 (269)
T 3gk3_A 174 NYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQ---DV---LEAKILPQIPVGRLGRPDEVAALIAFL 247 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------------CCSGGGCTTSSCBCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhch---hH---HHHHhhhcCCcCCccCHHHHHHHHHHH
Confidence 67 6777666555554443 48999999999998774322110 00 000111112223467899999999999
Q ss_pred HcCCC---CCceEEeeCCCCCC
Q 020476 239 LSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~~~s 257 (325)
+.... .+.++++.+|..+|
T Consensus 248 ~s~~~~~itG~~i~vdgG~~~s 269 (269)
T 3gk3_A 248 CSDDAGFVTGADLAINGGMHMS 269 (269)
T ss_dssp TSTTCTTCCSCEEEESTTSCCC
T ss_pred hCCCcCCeeCcEEEECCCEeCc
Confidence 97654 34489999887653
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.5e-19 Score=152.69 Aligned_cols=218 Identities=13% Similarity=0.050 Sum_probs=147.8
Q ss_pred CCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCc---ccccCCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSK---AELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~---~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+ |+||+++++.|+++|++|++++|+.+. ...+...........+|+.|.+++.++++ ++
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 85 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 85 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999 999999999999999999999998751 11111000001245689999988877664 68
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+||||||.... .....+.+...+++|+.++.++++++.......+++|++||... +.. .+.
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~ 154 (275)
T 2pd4_A 86 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS--TKY---------MAH 154 (275)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG--TSB---------CTT
T ss_pred CEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchh--cCC---------CCC
Confidence 999999997531 14456778899999999999999998763111368999999765 221 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .|++++.++||.+.++........-... ......|+ ..+.+.+|+|+++
T Consensus 155 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~~~~~p~dva~~~ 228 (275)
T 2pd4_A 155 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEVGNAG 228 (275)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCc------CCCCCHHHHHHHH
Confidence 3457 6777766666555443 4899999999999887432211111111 11111222 1267899999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.... ..| .+++.++.
T Consensus 229 ~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 229 MYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhCccccCCCCCEEEECCCc
Confidence 99997532 344 77777774
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=2e-19 Score=152.66 Aligned_cols=220 Identities=15% Similarity=0.010 Sum_probs=147.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||+++++.|+++|++|++++|+.... .. +...........+|+.|.+++.++++ +
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999986431 11 11111111234578888887776653 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|+||||||.... .+...+.++..+++|+.++.++++++.....+.+++|++||... +... .+....
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~~--------~~~~~~ 177 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG--QAKA--------VPKHAV 177 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG--TCSS--------CSSCHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh--ccCC--------CCCCcc
Confidence 8999999997532 22356778899999999999999988763225579999999765 2211 012345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cc--------hHHHH-HHHc--CCCCCCCcceeeecc
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AK--------MIPLF-MMFA--GGPLGSGQQWFSWIH 227 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~--------~~~~~-~~~~--~~~~~~~~~~~~~v~ 227 (325)
| .+|...+.....+..+ .|+++++++||.+.++..... .. --... .... ..++ ..+.+
T Consensus 178 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~ 251 (283)
T 1g0o_A 178 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL------RRVGL 251 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT------CSCBC
T ss_pred hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCC------CCCcC
Confidence 7 6777666665555433 489999999999987621100 00 00001 1111 2222 23789
Q ss_pred HHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
.+|+|++++.++.... .+.++++.+|.
T Consensus 252 p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 252 PIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 9999999999997543 34488887774
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.82 E-value=5.6e-20 Score=156.67 Aligned_cols=224 Identities=15% Similarity=0.022 Sum_probs=147.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC---CCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a 94 (325)
..++++||||+|+||++++++|+++|++|++++|+.++........ ....+..+|+.|.+++.++++ ++|+|||+|
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~nA 94 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINNA 94 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEECC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEECC
Confidence 3468999999999999999999999999999999876544332211 112245689999999988886 679999999
Q ss_pred CCCCC-CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCC-CCceecCC-CCC--CCch-HHHH
Q 020476 95 GTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTS-ETEVFDES-SPS--GNDY-LAEV 168 (325)
Q Consensus 95 ~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~-~~~~~~e~-~~~--~~~y-~~k~ 168 (325)
|.... .....+.++..+++|+.++.++++++.. ...+++|++||... +... ......++ .+. ...| .+|.
T Consensus 95 g~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~--~~~~riv~isS~~~--~~~~~~~~~~~~~~~~~~~~~~Y~~sK~ 170 (291)
T 3rd5_A 95 GIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP--RLTDRVVTVSSMAH--WPGRINLEDLNWRSRRYSPWLAYSQSKL 170 (291)
T ss_dssp CCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGG--GEEEEEEEECCGGG--TTCCCCSSCTTCSSSCCCHHHHHHHHHH
T ss_pred cCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHhheeEeechhh--ccCCCCcccccccccCCCCcchHHHHHH
Confidence 97532 2234556778999999999999999988 45569999999876 4322 11111111 111 2346 6777
Q ss_pred HHHHHHHHHhhc---CC--ceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 169 CREWEGTALKVN---KD--VRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~--~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
..+.....+..+ .+ +++..++||.+..+......... ... +......+-..+.+|+|++++.++.++.
T Consensus 171 a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~--~~~-----~~~~~~~~~~~~~~~~A~~~~~l~~~~~ 243 (291)
T 3rd5_A 171 ANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKL--GDA-----LMSAATRVVATDADFGARQTLYAASQDL 243 (291)
T ss_dssp HHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------------CHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHH--HHH-----HHHHHHHHHhCCHHHHHHHHHHHHcCCC
Confidence 666655555443 24 99999999999776422111000 000 0011111223469999999999998876
Q ss_pred CCc-eEEeeCC
Q 020476 244 YRG-VINGTAP 253 (325)
Q Consensus 244 ~~~-~~~~~~~ 253 (325)
..| .+++.+|
T Consensus 244 ~~G~~~~vdgG 254 (291)
T 3rd5_A 244 PGDSFVGPRFG 254 (291)
T ss_dssp CTTCEEEETTS
T ss_pred CCCceeCCccc
Confidence 666 5555443
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-19 Score=150.60 Aligned_cols=215 Identities=17% Similarity=0.115 Sum_probs=148.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++ ++|++
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 84 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL 84 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 356899999999999999999999999999999987553322110 1111245689999998887765 79999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||||.... ...+.+.++..+++|+.++.++.++ +++ .+ .+++|++||... +.. .+...
T Consensus 85 v~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~--~~~~g~iv~isS~~~--~~~---------~~~~~ 151 (247)
T 3rwb_A 85 VNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRA--AGKAGRVISIASNTF--FAG---------TPNMA 151 (247)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEEECCTHH--HHT---------CTTCH
T ss_pred EECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHH--cCCCcEEEEECchhh--ccC---------CCCch
Confidence 999997533 2345677888999999999888887 444 23 578999999876 321 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+..+ .++++..++||.+..+.... ........... .++ ..+...+|+|+++.
T Consensus 152 ~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~--~~~------~r~~~pedva~~v~ 223 (247)
T 3rwb_A 152 AYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEML--QAM------KGKGQPEHIADVVS 223 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHH--SSS------CSCBCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcc--ccc------CCCcCHHHHHHHHH
Confidence 67 6776666665555544 58999999999998763111 11111111110 121 23578999999999
Q ss_pred HHHcCCC---CCceEEeeCCC
Q 020476 237 EALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~ 254 (325)
.++.... .+.++++.+|.
T Consensus 224 ~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 224 FLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCccccCCCCCEEEECCCc
Confidence 9997643 34488888774
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.2e-19 Score=150.42 Aligned_cols=203 Identities=15% Similarity=0.077 Sum_probs=143.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---------CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---------GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---------~~d~v 90 (325)
+|+++||||+|+||++++++|+++|++|++++|+++..... .....+|+.|++++.++++ ++|+|
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~------~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 7 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASA------SVIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSE------EEECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccCC------cEEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 46899999999999999999999999999999987653211 1245689998888777664 68999
Q ss_pred EECCCCCCCC----CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 91 VNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 91 i~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||||..... ....+.+...+++|+.++..+++++.......+++|++||... +.. .+....| .
T Consensus 81 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a 149 (241)
T 1dhr_A 81 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDG---------TPGMIGYGM 149 (241)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred EEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHH--ccC---------CCCchHHHH
Confidence 9999975322 2234567788999999999998888652112358999999876 321 1223457 6
Q ss_pred HHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+.....+..+ .+++++.++||.+..+. .... ... .....+++.+|+|++++.+++
T Consensus 150 sK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~-------~~~~--~~~------~~~~~~~~~~~vA~~v~~l~~ 214 (241)
T 1dhr_A 150 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------NRKS--MPE------ADFSSWTPLEFLVETFHDWIT 214 (241)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------HHHH--STT------SCGGGSEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCcc-------cccc--Ccc------hhhccCCCHHHHHHHHHHHhc
Confidence 777777666665553 46999999999887552 1100 000 111235778999999999997
Q ss_pred CCC---CCceEEeeCCC
Q 020476 241 NPS---YRGVINGTAPN 254 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~ 254 (325)
... .+..+++.++.
T Consensus 215 ~~~~~~~G~~~~v~g~~ 231 (241)
T 1dhr_A 215 GNKRPNSGSLIQVVTTD 231 (241)
T ss_dssp TTTCCCTTCEEEEEEET
T ss_pred CCCcCccceEEEEeCCC
Confidence 643 34477776654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-20 Score=161.09 Aligned_cols=230 Identities=19% Similarity=0.095 Sum_probs=157.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC----------CCcccccC----CCCCccccCceeecCCchhHhhhC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS----------RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~----------~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~ 85 (325)
.+++|||||+|+||.++++.|+++|++|++++|+ .+...... ..........+|+.|.+++.++++
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3579999999999999999999999999999987 22211111 011111244679999988877765
Q ss_pred -------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--------CCCCCEEEEeeeeeeeec
Q 020476 86 -------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--------EGVRPSVLVSATALGYYG 147 (325)
Q Consensus 86 -------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~~v~~Ss~~v~~~g 147 (325)
++|+||||||.... .....+.+...+++|+.++.++++++.... ....++|++||... +.
T Consensus 107 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~ 184 (322)
T 3qlj_A 107 TAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAVDGRIINTSSGAG--LQ 184 (322)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCEEEEEECCHHH--HH
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCCCcEEEEEcCHHH--cc
Confidence 79999999997533 234667788899999999998888764310 01258999999876 32
Q ss_pred CCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCCCCCcce
Q 020476 148 TSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQW 222 (325)
Q Consensus 148 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
. .+....| .+|...+.....+..+ .|+++..++|| +..+.... ..... ......
T Consensus 185 ~---------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~-----------~~~~~~ 243 (322)
T 3qlj_A 185 G---------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM-----------ATQDQD 243 (322)
T ss_dssp C---------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC-------------------
T ss_pred C---------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh-----------hccccc
Confidence 1 1223467 7787777666655554 58999999999 54442211 11110 011222
Q ss_pred eeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCC-----------------CHHHHHHHHHHHhCCC
Q 020476 223 FSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV-----------------RLAEMCDHLGNVLGRP 272 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~-----------------s~~e~~~~i~~~~g~~ 272 (325)
+.++..+|+|++++.++.... .+.++++.+|... +..|+++.+.+.+|.+
T Consensus 244 ~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 244 FDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred cCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 346789999999999987543 3448888887644 7799999999999854
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=152.13 Aligned_cols=206 Identities=12% Similarity=0.049 Sum_probs=134.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|+|
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 346799999999999999999999999999999986553322110 0111245689999998887775 79999
Q ss_pred EECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 91 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 91 i~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|||||.... .+...+.++..+++|+.++..+++++.... .+ .+++|++||... +.. .+...
T Consensus 107 VnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~~~~~ 175 (272)
T 4dyv_A 107 FNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISA--TSP---------RPYSA 175 (272)
T ss_dssp EECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSST--TSC---------CTTCH
T ss_pred EECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhh--cCC---------CCCch
Confidence 999997422 244677788999999999777766553310 22 468999999876 321 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+ .++++..++||.+..+.......... .. ........+.+++|+|++++.+
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~--~~------~~~~~~~~~~~pedvA~~v~fL 247 (272)
T 4dyv_A 176 PYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAGVP--QA------DLSIKVEPVMDVAHVASAVVYM 247 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC--------------------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhcccch--hh------hhcccccCCCCHHHHHHHHHHH
Confidence 67 6777776665555443 48999999999998764211100000 00 0111223478999999999999
Q ss_pred HcCCC
Q 020476 239 LSNPS 243 (325)
Q Consensus 239 ~~~~~ 243 (325)
++++.
T Consensus 248 ~s~~~ 252 (272)
T 4dyv_A 248 ASLPL 252 (272)
T ss_dssp HHSCT
T ss_pred hCCCC
Confidence 99876
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.4e-19 Score=150.62 Aligned_cols=216 Identities=15% Similarity=0.080 Sum_probs=143.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+|+||++++++|+++|++|++..++... ..... ..........+|+.|.+++.++++ +
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999999999999988654432 21111 111111244689999988877764 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|++|||||.... .....+.++..+++|+.++.++++++.......+++|++||... +.. .+....
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~ 174 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQV--GLL---------HPSYGI 174 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHH--HHC---------CTTCHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhh--ccC---------CCCchH
Confidence 8999999997533 23456677888999999999998877642112358999999876 221 123346
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc--ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA--LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|...+.....+..+ .++++..++||.+..+.... ...... ......| ...+..++|+|++++.
T Consensus 175 Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~--~~~~~~p------~~r~~~pedvA~~v~~ 246 (267)
T 3u5t_A 175 YAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRD--RFAKLAP------LERLGTPQDIAGAVAF 246 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHH--HHHTSST------TCSCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHH--HHHhcCC------CCCCcCHHHHHHHHHH
Confidence 7 7787777776666655 38999999999998763211 011111 1111122 2347889999999999
Q ss_pred HHcCCC--CCc-eEEeeCC
Q 020476 238 ALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~ 253 (325)
++.... ..| ++++.+|
T Consensus 247 L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 247 LAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHSTTTTTCCSEEEEESSS
T ss_pred HhCccccCccCCEEEeCCC
Confidence 997654 244 7777766
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.9e-20 Score=158.36 Aligned_cols=221 Identities=14% Similarity=0.069 Sum_probs=150.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 106 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRI 106 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999999986543221100 0111245679999988877664 79
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+||||||.... .....+.++..+++|+.++.++++++.... .+.+++|++||... +.. .+...
T Consensus 107 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 175 (277)
T 4fc7_A 107 DILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLG--NRG---------QALQV 175 (277)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHH--HHT---------CTTCH
T ss_pred CEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhh--CCC---------CCCcH
Confidence 999999996432 334677888999999999999988763210 24568999999876 321 12234
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+..+ .|+++..++||.+.++... ......... ......|+ ..+.+.+|+|++++
T Consensus 176 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~dvA~~v~ 249 (277)
T 4fc7_A 176 HAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPL------QRLGNKTEIAHSVL 249 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTT------SSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCC------CCCcCHHHHHHHHH
Confidence 57 6777666665555443 4899999999999876310 000000111 12222232 23678999999999
Q ss_pred HHHcCCC---CCceEEeeCCCCCC
Q 020476 237 EALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~~~s 257 (325)
.++.... .+.++++.+|..++
T Consensus 250 fL~s~~~~~itG~~i~vdGG~~~~ 273 (277)
T 4fc7_A 250 YLASPLASYVTGAVLVADGGAWLT 273 (277)
T ss_dssp HHHSGGGTTCCSCEEEESTTHHHH
T ss_pred HHcCCccCCcCCCEEEECCCcccC
Confidence 9997532 34488888875443
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=151.84 Aligned_cols=221 Identities=17% Similarity=0.032 Sum_probs=149.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
...++++||||+|.||+++++.|+++|++|++++|+.++....... ........+|+.|.+++.++++
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 3456899999999999999999999999999999986543221110 0001244589999888776654
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|++|||||.... .....+.+...+++|+.++.++++++... ..+..++|++||... +.. .+
T Consensus 86 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~ 154 (265)
T 3lf2_A 86 GCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLA--SQP---------EP 154 (265)
T ss_dssp CSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGG--TSC---------CT
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCccc--CCC---------CC
Confidence 68999999997533 24556778889999999999988877432 134568999999876 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-----------ccchHHHHHHHcCCCCCCCcceee
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-----------LAKMIPLFMMFAGGPLGSGQQWFS 224 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~ 224 (325)
....| .+|...+.....+..+ .|+++..++||.+.++.... ...+..........|+ ..
T Consensus 155 ~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r 228 (265)
T 3lf2_A 155 HMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPL------GR 228 (265)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTT------CS
T ss_pred CchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCc------CC
Confidence 23457 6777666665555543 48999999999998752100 0001111111111222 23
Q ss_pred eccHHHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 225 WIHLDDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+...+|+|++++.++.... .+.++++.+|..
T Consensus 229 ~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 229 LGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred CcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 7789999999999997533 344888887753
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=3.7e-20 Score=156.90 Aligned_cols=221 Identities=16% Similarity=0.086 Sum_probs=148.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCC---ccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKK---TRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~---~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..++++||||+|+||++++++|+++|++|++++|+.++..... .... ......+|+.|++++.++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3468999999999999999999999999999999865432211 1000 11244679999988877664
Q ss_pred -CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceec
Q 020476 86 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
++|+||||||.... .....+.+...+++|+.++.++++++.... .+ +++|++||... +...
T Consensus 85 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~~------ 155 (280)
T 1xkq_A 85 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVA--GPQA------ 155 (280)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--SSSC------
T ss_pred CCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCccc--cCCC------
Confidence 68999999997532 233556788899999999999888775420 23 79999999876 3211
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc---cch----HHHHHHHcCCCCCCCcceee
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL---AKM----IPLFMMFAGGPLGSGQQWFS 224 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~ 224 (325)
.+....| .+|...+.....+.. ..|+++++++||++.++..... ... ........ .......
T Consensus 156 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~-----~~~p~~~ 228 (280)
T 1xkq_A 156 --QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHK-----ECIPIGA 228 (280)
T ss_dssp --CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCT-----TTCTTSS
T ss_pred --CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHH-----cCCCCCC
Confidence 1233457 677766666555543 3589999999999998732111 000 00111110 0111234
Q ss_pred eccHHHHHHHHHHHHcCC---C-CCceEEeeCCCC
Q 020476 225 WIHLDDIVNLIYEALSNP---S-YRGVINGTAPNP 255 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~---~-~~~~~~~~~~~~ 255 (325)
+.+.+|+|++++.++..+ . .+.++++.+|..
T Consensus 229 ~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 229 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 789999999999998754 2 344888888754
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.4e-19 Score=153.26 Aligned_cols=205 Identities=16% Similarity=0.096 Sum_probs=137.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC--CccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|||||+|+||++++++|+++|++|++++|+..+...... .. .......+|+.|++++.++++ +
T Consensus 32 ~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 32 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999999999999999998654322110 00 001134579999988877765 7
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHH----HHHHHHHHhcCCCCC--CCEEEEeeeeeeeecCCCCceecCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRV----TSKVVDLINESPEGV--RPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~----~~~ll~~~~~~~~~~--~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
+|+|||+||.... .....+.+...+++|+.+ ++.+++.+++ .+. +++|++||... +....
T Consensus 112 iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~--~~~~~g~iv~isS~~~--~~~~~------- 180 (279)
T 1xg5_A 112 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKE--RNVDDGHIININSMSG--HRVLP------- 180 (279)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCSCEEEEECCGGG--TSCCS-------
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCCceEEEEcChhh--cccCC-------
Confidence 9999999996532 223566788899999999 7777888877 454 79999999876 43111
Q ss_pred CCCCCch-HHHHHHHHHHHHHhh-----cCCceEEEEEeceEEcCCCC-cccchHHHHHHHcCCCCCCCcceeeeccHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D 230 (325)
.+....| .+|...+.....+.. ..++++++++||.+.++... ........... ......+++++|
T Consensus 181 ~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d 252 (279)
T 1xg5_A 181 LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAA--------TYEQMKCLKPED 252 (279)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHH--------HHC---CBCHHH
T ss_pred CCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHhh--------hcccccCCCHHH
Confidence 1122356 667665544443332 35899999999999876310 00000000000 011234789999
Q ss_pred HHHHHHHHHcCCC
Q 020476 231 IVNLIYEALSNPS 243 (325)
Q Consensus 231 ~a~a~~~~~~~~~ 243 (325)
+|++++.++..+.
T Consensus 253 vA~~i~~l~~~~~ 265 (279)
T 1xg5_A 253 VAEAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHHHSCT
T ss_pred HHHHHHHHhcCCc
Confidence 9999999998765
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.4e-19 Score=148.75 Aligned_cols=217 Identities=14% Similarity=0.050 Sum_probs=141.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
|++++||||+|+||+++++.|+++|++|++++|+.++...... .. .....+...|.+++.++++ ++|+|||
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~-~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~ 78 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FA-ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVS 78 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HH-HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEE
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HH-hcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEE
Confidence 4689999999999999999999999999999998765332211 00 0000111116666655543 7999999
Q ss_pred CCCCC-CC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 93 LAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 93 ~a~~~-~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||.. .. .....+.++..+++|+.++.++++++... ..+.+++|++||... +.. .+....| .
T Consensus 79 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~~ 147 (254)
T 1zmt_A 79 NDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATP--FGP---------WKELSTYTS 147 (254)
T ss_dssp ECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTT--TSC---------CTTCHHHHH
T ss_pred CCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCccc--ccC---------CCCchHHHH
Confidence 99965 22 23456678889999999998888776321 035579999999876 321 1233467 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc--chH---H-HH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KMI---P-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~--~~~---~-~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
+|...+.....+..+ .++++++++||.++|+...... .+. + .. ......+. ..+.+.+|+|+++
T Consensus 148 sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~------~~~~~p~dvA~~v 221 (254)
T 1zmt_A 148 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTAL------QRLGTQKELGELV 221 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSS------SSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCC------CCCcCHHHHHHHH
Confidence 777666655555443 4899999999999877532211 000 0 00 01111121 1367899999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+.++..+. .+.++++.+|..
T Consensus 222 ~~l~s~~~~~~tG~~~~vdgG~~ 244 (254)
T 1zmt_A 222 AFLASGSCDYLTGQVFWLAGGFP 244 (254)
T ss_dssp HHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHhCcccCCccCCEEEECCCch
Confidence 99998654 344888877753
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.3e-19 Score=150.87 Aligned_cols=222 Identities=16% Similarity=0.067 Sum_probs=148.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC---CCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ---GSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~---~~d~ 89 (325)
..++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+.+.++++ ++|+
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 346899999999999999999999999999999987543221110 0001134578888888877765 7999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||||.... .+...+.++..+++|+.++..+.+ .+++ .+.+++|++||... +.. .+...
T Consensus 89 lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~~~~ 155 (267)
T 3t4x_A 89 LINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIE--RKEGRVIFIASEAA--IMP---------SQEMA 155 (267)
T ss_dssp EEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTEEEEEEECCGGG--TSC---------CTTCH
T ss_pred EEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCCEEEEEcchhh--ccC---------CCcch
Confidence 9999997533 233466778889999999666654 4444 45679999999876 321 12345
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc------------ccchHHHHHHHcCCCCCCCcceeeec
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA------------LAKMIPLFMMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (325)
.| .+|...+.....+..+ .++++..++||.+..+.... .......+. .... .......+.
T Consensus 156 ~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~r~~ 231 (267)
T 3t4x_A 156 HYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFM-KENR---PTSIIQRLI 231 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHH-HHHC---TTCSSCSCB
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHh-hccC---CcccccCcc
Confidence 67 7787777666666554 37999999999988752100 000000000 0000 011123588
Q ss_pred cHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
+++|+|++++.++.... .+.++++.+|...+
T Consensus 232 ~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 232 RPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp CTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred CHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 99999999999987532 34489999887655
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.81 E-value=5.6e-19 Score=148.78 Aligned_cols=219 Identities=14% Similarity=0.007 Sum_probs=148.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.+++|||||+|+||++++++|+++|++|++++|+.... ... ...........+|+.|.+++.++++ ++
T Consensus 18 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 97 (270)
T 3is3_A 18 GKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHL 97 (270)
T ss_dssp TCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999999999999988764331 111 0111111245689999988877764 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|++|||||.... .+...+.+...+++|+.++.++++++.......+++|++||......+ .+....|
T Consensus 98 d~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------~~~~~~Y 167 (270)
T 3is3_A 98 DIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS----------VPKHSLY 167 (270)
T ss_dssp CEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC----------CTTCHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC----------CCCCchh
Confidence 999999997533 234677788999999999999999887632334589999997631011 1234467
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---------cchHHHH--HHHcCCCCCCCcceeeeccHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---------AKMIPLF--MMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---------~~~~~~~--~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+|...+.....+..+ .|+++..++||.+.++..... ....... ......|+ ..+.+.+
T Consensus 168 ~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p~ 241 (270)
T 3is3_A 168 SGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPL------HRNGWPQ 241 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTT------CSCBCHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCC------CCCCCHH
Confidence 7787777666655554 489999999999988742100 0000001 11111122 2367899
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
|+|++++.++.... .+.++++.+|.
T Consensus 242 dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 242 DVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 99999999997543 34488888774
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=151.88 Aligned_cols=221 Identities=17% Similarity=0.096 Sum_probs=149.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~------~~d~vi 91 (325)
..++++||||+|+||++++++|+++|++|++++|+.++....... .....+..+|+.|.+++.++++ ++|++|
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 345799999999999999999999999999999987654332111 0111245689999988877664 579999
Q ss_pred EC-CCCCCCC--------CCChhhHHHHHHHhhHHHHHHHHHHhcCC--------CCCCCEEEEeeeeeeeecCCCCcee
Q 020476 92 NL-AGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESP--------EGVRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 92 ~~-a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
|+ |+..... ....+.+...+++|+.++.++++++.... .+.+++|++||... +..
T Consensus 109 ~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~------ 180 (281)
T 3ppi_A 109 VAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVLTASIAG--YEG------ 180 (281)
T ss_dssp ECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEEECCGGG--TSC------
T ss_pred EccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEEEecccc--cCC------
Confidence 99 5432211 34556688999999999999888775210 23458999999876 321
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+....| .+|...+.....+..+ .++++..++||.+..+..... ..... ......+. ...+.+.+
T Consensus 181 ---~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~--~~~~~~~~-----~~~~~~pe 250 (281)
T 3ppi_A 181 ---QIGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALA--KFAANIPF-----PKRLGTPD 250 (281)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHH--HHHHTCCS-----SSSCBCHH
T ss_pred ---CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHH--HHHhcCCC-----CCCCCCHH
Confidence 1234467 6777666555544443 489999999999976521111 11111 12222222 13478999
Q ss_pred HHHHHHHHHHcCCCCCc-eEEeeCCCCCC
Q 020476 230 DIVNLIYEALSNPSYRG-VINGTAPNPVR 257 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~-~~~~~~~~~~s 257 (325)
|+|++++.+++++...| ++++.+|..++
T Consensus 251 dvA~~v~~l~s~~~~tG~~i~vdGG~~~~ 279 (281)
T 3ppi_A 251 EFADAAAFLLTNGYINGEVMRLDGAQRFT 279 (281)
T ss_dssp HHHHHHHHHHHCSSCCSCEEEESTTCCCC
T ss_pred HHHHHHHHHHcCCCcCCcEEEECCCcccC
Confidence 99999999998766555 88888887654
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.2e-19 Score=149.17 Aligned_cols=210 Identities=17% Similarity=0.105 Sum_probs=125.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhh---CCCCEEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI---QGSTAVV 91 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~---~~~d~vi 91 (325)
...++++||||+|+||++++++|++ |+.|++++|+++......... ......+|+.+.+. +.+.+ .++|+||
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~id~lv 80 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAEIE-GVEPIESDIVKEVLEEGGVDKLKNLDHVDTLV 80 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHTST-TEEEEECCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHhhc-CCcceecccchHHHHHHHHHHHHhcCCCCEEE
Confidence 3457899999999999999999987 899999999876544332211 11133456665422 22222 3799999
Q ss_pred ECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 92 NLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 92 ~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|+||..... ....+.+...+++|+.++..+++++... ....+++|++||... +... +....| .+
T Consensus 81 ~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~~~Y~as 149 (245)
T 3e9n_A 81 HAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASGCVIYINSGAG--NGPH---------PGNTIYAAS 149 (245)
T ss_dssp ECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEC---------------------CHHHHHH
T ss_pred ECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEEEEcCccc--ccCC---------CCchHHHHH
Confidence 999975332 2244567788999999977776665321 012278999999876 4321 224467 77
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|...+.....+..+ .++++..++||.+.++..... ... . ........+++++|+|++++.+++.+.
T Consensus 150 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~---~~~----~----~~~~~~~~~~~p~dvA~~i~~l~~~~~ 218 (245)
T 3e9n_A 150 KHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGL---MDS----Q----GTNFRPEIYIEPKEIANAIRFVIDAGE 218 (245)
T ss_dssp HHHHHHHHHHHHHHHGGGTCEEEEEEECCC---------------------------CCGGGSCHHHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhh---hhh----h----hcccccccCCCHHHHHHHHHHHHcCCC
Confidence 87777666655553 589999999999988742111 000 0 011112347899999999999999887
Q ss_pred CCceEEee
Q 020476 244 YRGVINGT 251 (325)
Q Consensus 244 ~~~~~~~~ 251 (325)
...++|+.
T Consensus 219 ~~~~~~i~ 226 (245)
T 3e9n_A 219 TTQITNVD 226 (245)
T ss_dssp TEEEEEEE
T ss_pred ccceeeeE
Confidence 66688765
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=3.2e-19 Score=151.86 Aligned_cols=219 Identities=11% Similarity=0.016 Sum_probs=148.8
Q ss_pred CCeEEEECCCch--HHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGF--IGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~--iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
.++++||||+|+ ||+++++.|+++|++|++++|+........ .......+..+|+.|.+++.++++ ++
T Consensus 31 gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (293)
T 3grk_A 31 GKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWGKL 110 (293)
T ss_dssp TCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 458999999988 999999999999999999999853211110 000011245689999998887764 78
Q ss_pred CEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.+...+++|+.++.++++++........++|++||... +.. .+.
T Consensus 111 D~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~---------~~~ 179 (293)
T 3grk_A 111 DFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA--EKV---------MPN 179 (293)
T ss_dssp SEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG--TSB---------CTT
T ss_pred CEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh--ccC---------CCc
Confidence 999999997531 24557778899999999999999988753233468999999876 321 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.....+..+ .|+++..++||.+..+........-... ......++ ..+...+|+|+++
T Consensus 180 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v 253 (293)
T 3grk_A 180 YNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPL------RRTVTIDEVGDVG 253 (293)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTT------SSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCC------CCCCCHHHHHHHH
Confidence 4567 7787776666555543 4899999999999887432221111111 11112222 2367899999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+.++.... .+.++++.+|..
T Consensus 254 ~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 254 LYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp HHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHcCccccCCcceEEEECCCcc
Confidence 99997532 344888888854
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.81 E-value=1.2e-18 Score=143.27 Aligned_cols=214 Identities=15% Similarity=0.105 Sum_probs=147.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
|.|+||||||++.||+++++.|++.|++|.+.+|+++................+|+.|++++.++++ ++|++|
T Consensus 1 MnK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLV 80 (247)
T 3ged_A 1 MNRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLV 80 (247)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 4578999999999999999999999999999999876654443333222345789999988876653 789999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|.+||... +.. .+....| .+
T Consensus 81 NNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~--~~~---------~~~~~~Y~as 149 (247)
T 3ged_A 81 NNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRA--FQS---------EPDSEAYASA 149 (247)
T ss_dssp ECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGG--TSC---------CTTCHHHHHH
T ss_pred ECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeeccc--ccC---------CCCCHHHHHH
Confidence 99997533 44567789999999999987766655322 013378999999865 221 1223457 66
Q ss_pred HHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCC
Q 020476 167 EVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSY 244 (325)
Q Consensus 167 k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~ 244 (325)
|.....+...+..+ .++++..+.||++-.+..... ... .....|++ -+...+|+|++++.+++....
T Consensus 150 Kaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~---~~~--~~~~~Pl~------R~g~pediA~~v~fL~s~~~i 218 (247)
T 3ged_A 150 KGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEF---TQE--DCAAIPAG------KVGTPKDISNMVLFLCQQDFI 218 (247)
T ss_dssp HHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---C---CHH--HHHTSTTS------SCBCHHHHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHH---HHH--HHhcCCCC------CCcCHHHHHHHHHHHHhCCCC
Confidence 76555444443332 389999999999876542211 111 11222332 256789999999999986554
Q ss_pred Cc-eEEeeCCC
Q 020476 245 RG-VINGTAPN 254 (325)
Q Consensus 245 ~~-~~~~~~~~ 254 (325)
.| ++.+.+|-
T Consensus 219 TG~~i~VDGG~ 229 (247)
T 3ged_A 219 TGETIIVDGGM 229 (247)
T ss_dssp CSCEEEESTTG
T ss_pred CCCeEEECcCH
Confidence 45 88887774
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-19 Score=149.78 Aligned_cols=217 Identities=16% Similarity=0.085 Sum_probs=145.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec-CCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r-~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++||||||+|+||++++++|+++|++|+++++ +........ ..........+|+.|.+++.++++ +
T Consensus 12 ~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 12 SQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp -CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3568999999999999999999999999999884 443322111 011111244678889888877665 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+|||+||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||... +.. .+
T Consensus 92 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~--~~~---------~~ 158 (256)
T 3ezl_A 92 IDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVE--RGWGRIINISSVNG--QKG---------QF 158 (256)
T ss_dssp EEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCCCG--GGS---------CS
T ss_pred CCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEEcchhh--ccC---------CC
Confidence 8999999997533 23456778889999999977776654 44 45678999999876 321 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ .++++..++||.+.++.... ...... ......+. ..+.+.+|+|++
T Consensus 159 ~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~~~------~~~~~~~dva~~ 230 (256)
T 3ezl_A 159 GQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLE--KIVATIPV------RRLGSPDEIGSI 230 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHH--HHHHHSTT------SSCBCHHHHHHH
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHH--HHHhcCCC------CCCcCHHHHHHH
Confidence 34567 7777666655555443 48999999999998763211 111111 11111222 236789999999
Q ss_pred HHHHHcCCC---CCceEEeeCCCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
++.++.... .+.++++.+|..+
T Consensus 231 ~~~l~s~~~~~~tG~~i~vdgG~~~ 255 (256)
T 3ezl_A 231 VAWLASEESGFSTGADFSLNGGLHM 255 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTSCC
T ss_pred HHHHhCCcccCCcCcEEEECCCEeC
Confidence 999986532 3448899888643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.5e-19 Score=148.98 Aligned_cols=225 Identities=16% Similarity=0.057 Sum_probs=149.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc----------------c----cCCCCCccccCceeecCCc
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE----------------L----IFPGKKTRFFPGVMIAEEP 78 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------~----~~~~~~~~~~~~~d~~d~~ 78 (325)
..++++||||+|.||.++++.|+++|++|++++|+..... . ............+|+.|.+
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 3468999999999999999999999999999999742211 0 0011111123467999998
Q ss_pred hhHhhhC-------CCCEEEECCCCCCCC----CCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeee
Q 020476 79 QWRDCIQ-------GSTAVVNLAGTPIGT----RWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALG 144 (325)
Q Consensus 79 ~~~~~~~-------~~d~vi~~a~~~~~~----~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~ 144 (325)
++.++++ ++|++|||||..... ....+.+...+++|+.++.++++++.... ....++|++||...
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~- 168 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGGRGGSIILTSSVGG- 168 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG-
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCcEEEEECchhh-
Confidence 8887764 799999999975332 34567788899999999999888764320 12468999999876
Q ss_pred eecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHH-c-CC----
Q 020476 145 YYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMF-A-GG---- 214 (325)
Q Consensus 145 ~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~-~-~~---- 214 (325)
+.. .+....| .+|...+.....+..+ .++++..++||.+..+....... ...+... . ..
T Consensus 169 -~~~---------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~~~~~ 237 (286)
T 3uve_A 169 -LKA---------YPHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGT-FKMFRPDLENPGPDDM 237 (286)
T ss_dssp -TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHH-HHHHCTTSSSCCHHHH
T ss_pred -ccC---------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccch-hhhccccccccchhhH
Confidence 321 1233457 7777666666555544 58999999999998875321100 0000000 0 00
Q ss_pred ----CCCCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 215 ----PLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 215 ----~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
....... ..+.+.+|+|++++.++.... .+.++++.+|..+
T Consensus 238 ~~~~~~~~~~p-~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~~l 285 (286)
T 3uve_A 238 APICQMFHTLP-IPWVEPIDISNAVLFFASDEARYITGVTLPIDAGSCL 285 (286)
T ss_dssp HHHHHTTCSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHhhhccC-CCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcccc
Confidence 0111111 457899999999999997543 3448888888543
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.80 E-value=8.3e-20 Score=154.34 Aligned_cols=199 Identities=15% Similarity=0.042 Sum_probs=139.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
+++|+||||+|+||++++++|++ .|++|++++|+.+....... ......+..+|+.|.+.+.++++ ++
T Consensus 4 ~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (276)
T 1wma_A 4 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGGL 83 (276)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 56899999999999999999999 99999999998654322110 00111245689999988887775 79
Q ss_pred CEEEECCCCCCCCCC--C-hhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecC-CC----------Cce
Q 020476 88 TAVVNLAGTPIGTRW--S-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGT-SE----------TEV 153 (325)
Q Consensus 88 d~vi~~a~~~~~~~~--~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~-~~----------~~~ 153 (325)
|+||||||....... . .+.....+++|+.++.++++++.......+++|++||... +.. .. ..+
T Consensus 84 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~--~~~~~~~~~~~~~~~~~~~ 161 (276)
T 1wma_A 84 DVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMS--VRALKSCSPELQQKFRSET 161 (276)
T ss_dssp EEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHH--HHHHHTSCHHHHHHHHCSS
T ss_pred CEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhh--hcccccCChhHHhhccccc
Confidence 999999997532211 1 3567888999999999999999873112358999999876 321 00 001
Q ss_pred ecCC---------------------CCCCCch-HHHHHHHHHHHHHhhc-------CCceEEEEEeceEEcCCCCcccch
Q 020476 154 FDES---------------------SPSGNDY-LAEVCREWEGTALKVN-------KDVRLALIRIGIVLGKDGGALAKM 204 (325)
Q Consensus 154 ~~e~---------------------~~~~~~y-~~k~~~~~~~~~~~~~-------~~~~~~ilRp~~i~g~~~~~~~~~ 204 (325)
++|+ ..+...| .+|...+.....+..+ .+++++.++||.+.++....
T Consensus 162 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG~v~t~~~~~---- 237 (276)
T 1wma_A 162 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---- 237 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred cchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCCccccCcCCc----
Confidence 1111 1123567 7787766665555443 58999999999988763211
Q ss_pred HHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 205 IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
..+.+.+|+|++++.++..+
T Consensus 238 ------------------~~~~~~~~~a~~~~~l~~~~ 257 (276)
T 1wma_A 238 ------------------KATKSPEEGAETPVYLALLP 257 (276)
T ss_dssp ------------------TCSBCHHHHTHHHHHHHSCC
T ss_pred ------------------cccCChhHhhhhHhhhhcCc
Confidence 13689999999999999755
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-19 Score=153.32 Aligned_cols=215 Identities=16% Similarity=0.164 Sum_probs=149.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC----
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ---- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~---- 85 (325)
..++++||||+|+||++++++|+++|+ +|++++|+.+........ ........+|+.|.+++.++++
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 457899999999999999999999887 999999987654332110 1111244689999998887765
Q ss_pred ---CCCEEEECCCCCC-C---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCcee
Q 020476 86 ---GSTAVVNLAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 86 ---~~d~vi~~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
++|+||||||... . .....+.++..+++|+.++.++++++ ++ .+.+++|++||... +..
T Consensus 112 ~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~IV~isS~~~--~~~------ 181 (287)
T 3rku_A 112 EFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQA--KNSGDIVNLGSIAG--RDA------ 181 (287)
T ss_dssp GGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSC------
T ss_pred hcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCeEEEECChhh--cCC------
Confidence 5899999999653 1 24467788999999999999988887 34 45679999999876 321
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHH-HHHcCCCCCCCcceeeeccH
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.+....| .+|...+.....+..+ .|+++..++||.|..+... ......... ..... ..++..
T Consensus 182 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~p~~p 249 (287)
T 3rku_A 182 ---YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKD---------TTPLMA 249 (287)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTT---------SCCEEH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcc---------cCCCCH
Confidence 1234467 7787777666666554 5899999999999876310 000000111 11100 123489
Q ss_pred HHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 229 DDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+|+|++++.++..+. .++++.+.++++
T Consensus 250 edvA~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 250 DDVADLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHHHHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred HHHHHHHHHHhCCCCCeEecceEEeeCCCC
Confidence 999999999998765 244787877764
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=5.3e-20 Score=155.27 Aligned_cols=195 Identities=12% Similarity=-0.011 Sum_probs=136.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++|+||||+|+||++++++|+++|++|++++|+++....... ......+..+|+.|.+++.++++ ++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 34689999999999999999999999999999998654322110 01111244679999888877664 78
Q ss_pred CEEEECCCCCCCCC---CChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|+||||||...... ...+.....+++|+.++.++++++ ++ .+.+++|++||... +... +.
T Consensus 110 D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~~---------~~ 176 (272)
T 1yb1_A 110 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK--NNHGHIVTVASAAG--HVSV---------PF 176 (272)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCCC---CCCH---------HH
T ss_pred cEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cCCCEEEEEechhh--cCCC---------CC
Confidence 99999999753322 224456788999999977766554 44 46679999999876 4311 11
Q ss_pred CCch-HHHHHHHHHHHHHhhc------CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN------KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~------~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
...| .+|...+.....+..+ .+++++++|||++.++.... .. .....+++.+|+|+
T Consensus 177 ~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~--~~---------------~~~~~~~~~~dva~ 239 (272)
T 1yb1_A 177 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN--PS---------------TSLGPTLEPEEVVN 239 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC--TH---------------HHHCCCCCHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc--cc---------------ccccCCCCHHHHHH
Confidence 2346 6777666555544443 48999999999998774211 00 01134789999999
Q ss_pred HHHHHHcCCC
Q 020476 234 LIYEALSNPS 243 (325)
Q Consensus 234 a~~~~~~~~~ 243 (325)
+++.++.++.
T Consensus 240 ~i~~~~~~~~ 249 (272)
T 1yb1_A 240 RLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHcCC
Confidence 9999998764
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=1e-19 Score=152.53 Aligned_cols=218 Identities=15% Similarity=0.087 Sum_probs=145.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..|+++||||+|+||++++++|+++|++|++++|++++........ .......+|+.|.+++.++++ ++|+|
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 3468999999999999999999999999999999875433221110 111244679999988877664 57999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|||||.... .....+.++..+++|+.++.++++++.......+++|++||... ++. +....| .+
T Consensus 85 vnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~--~~~----------~~~~~Y~as 152 (263)
T 2a4k_A 85 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAG--LGA----------FGLAHYAAG 152 (263)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTT--CCH----------HHHHHHHHC
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchh--cCC----------CCcHHHHHH
Confidence 999997532 22345667888999999999999988763212468999999876 421 112345 45
Q ss_pred HHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+.. ..|+++++++||.+.++...... .... ......|. ..+.+.+|+|++++.++..+
T Consensus 153 K~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~--~~~~~~p~------~~~~~p~dvA~~v~~l~s~~ 224 (263)
T 2a4k_A 153 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE--QEVGASPL------GRAGRPEEVAQAALFLLSEE 224 (263)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH--HHHHTSTT------CSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHH--HHHhcCCC------CCCcCHHHHHHHHHHHhCcc
Confidence 5544444333332 35899999999999887422211 1111 11122222 23789999999999999754
Q ss_pred C---CCceEEeeCCCCC
Q 020476 243 S---YRGVINGTAPNPV 256 (325)
Q Consensus 243 ~---~~~~~~~~~~~~~ 256 (325)
. .+..+++.++..+
T Consensus 225 ~~~~tG~~i~vdgG~~~ 241 (263)
T 2a4k_A 225 SAYITGQALYVDGGRSI 241 (263)
T ss_dssp GTTCCSCEEEESTTTTT
T ss_pred ccCCcCCEEEECCCccc
Confidence 2 3448888887644
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.80 E-value=2.3e-19 Score=149.60 Aligned_cols=213 Identities=14% Similarity=0.079 Sum_probs=144.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceee--cCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMI--AEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~--~d~~~~~~~~~------ 85 (325)
..++++||||+|+||+++++.|+++|++|++++|+.+........ .....+..+|+ .|.+.+.++++
T Consensus 11 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (252)
T 3f1l_A 11 NDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVNY 90 (252)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHhC
Confidence 346899999999999999999999999999999987553322110 00111345777 77777666554
Q ss_pred -CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|++|||||.... .....+.++..+++|+.++..+++++ ++ .+.+++|++||... +..
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~~g~iv~isS~~~--~~~-------- 158 (252)
T 3f1l_A 91 PRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLK--SDAGSLVFTSSSVG--RQG-------- 158 (252)
T ss_dssp SCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT--SSSCEEEEECCGGG--TSC--------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHH--CCCCEEEEECChhh--ccC--------
Confidence 79999999997421 34556778889999999999888877 44 46679999999875 221
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.+....| .+|...+.....+..+. .+++..+.||.+..+. .... .. ......+...+|+|.
T Consensus 159 -~~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~-------~~~~--~~------~~~~~~~~~p~dva~ 222 (252)
T 3f1l_A 159 -RANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAM-------RASA--FP------TEDPQKLKTPADIMP 222 (252)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHH-------HHHH--CT------TCCGGGSBCTGGGHH
T ss_pred -CCCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCch-------hhhh--CC------ccchhccCCHHHHHH
Confidence 1233467 77877776666665544 3899999999876531 1100 00 011123678899999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCCCHH
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPVRLA 259 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~s~~ 259 (325)
+++.++.... .+.++++.+|...++.
T Consensus 223 ~~~~L~s~~~~~itG~~i~vdgG~~~~~~ 251 (252)
T 3f1l_A 223 LYLWLMGDDSRRKTGMTFDAQPGRKPGIS 251 (252)
T ss_dssp HHHHHHSGGGTTCCSCEEESSCC------
T ss_pred HHHHHcCccccCCCCCEEEeCCCcCCCCC
Confidence 9999997643 3448999888766554
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.80 E-value=7e-19 Score=145.02 Aligned_cols=197 Identities=17% Similarity=0.042 Sum_probs=136.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
+++++||||+|+||++++++|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|++|
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 56899999999999999999999999999999987553322111 0011245689999988877664 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||||.... .....+.++..+++|+.++..+++++... .....++|++||... +... +....| .+
T Consensus 83 nnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~~---------~~~~~Y~as 151 (235)
T 3l6e_A 83 HCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAA--QVGK---------ANESLYCAS 151 (235)
T ss_dssp EECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEEC--CSSC---------SSHHHHHHH
T ss_pred ECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHh--cCCC---------CCCcHHHHH
Confidence 99997532 24467788899999999998887776431 012238999999876 3211 123457 77
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|...+.....+..+ .++++..++||.+..+....... .....+.+.+|+|++++.+++++.
T Consensus 152 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~----------------~~~~~~~~pedvA~~v~~l~~~~~ 215 (235)
T 3l6e_A 152 KWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTDH----------------VDPSGFMTPEDAAAYMLDALEARS 215 (235)
T ss_dssp HHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC---------------------------CBCHHHHHHHHHHHTCCCS
T ss_pred HHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccCC----------------CCCcCCCCHHHHHHHHHHHHhCCC
Confidence 87777666655553 48999999999997653211100 011247899999999999998765
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.6e-19 Score=152.28 Aligned_cols=217 Identities=12% Similarity=-0.025 Sum_probs=147.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC------CC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ------GS 87 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~------~~ 87 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+....... .........+|+.|.+.+.++++ ++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i 110 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV 110 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 345789999999999999999999999999999998765433211 11111244679999988877765 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||... +.. .+.
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~g~Iv~isS~~~--~~~---------~~~ 177 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVA--RKWGRVVSIGSINQ--LRP---------KSV 177 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTT
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCcEEEEECCHHh--CCC---------CCC
Confidence 999999997533 23456778889999999999888876 33 35579999999876 321 112
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-hHHHH-HHHcCC-CCCCCcceeeeccHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-MIPLF-MMFAGG-PLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~~~~~-~~~~~~-~~~~~~~~~~~v~v~D~a~ 233 (325)
...| .+|...+.....+..+ .++++..++||.+..+....... .-... ...... ++ ..+...+|+|+
T Consensus 178 ~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~ 251 (275)
T 4imr_A 178 VTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWM------GRAGRPEEMVG 251 (275)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTT------CSCBCGGGGHH
T ss_pred chhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCcc------CCCcCHHHHHH
Confidence 2347 7777766666555543 38999999999998652110000 00000 111111 22 12567899999
Q ss_pred HHHHHHcCCC---CCceEEeeCC
Q 020476 234 LIYEALSNPS---YRGVINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~ 253 (325)
+++.++.... .+.++++.+|
T Consensus 252 ~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 252 AALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHHHHcCcccCCCCCCEEEeCCC
Confidence 9999997643 3448877765
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.4e-20 Score=157.33 Aligned_cols=213 Identities=11% Similarity=0.028 Sum_probs=138.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||++++++|+++|++|++++|+.+....... ......+..+|+.|.+++.++++ ++|
T Consensus 31 gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 31 GRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 3589999999999999999999999999999998765432211 11111245689999988887765 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+||||||.... .....+.....+++|+.++.++++++.... .+ .+++|++||... +.. .+...
T Consensus 111 ~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 179 (301)
T 3tjr_A 111 VVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAG--LVP---------NAGLG 179 (301)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG--TSC---------CTTBH
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhh--cCC---------CCCch
Confidence 99999997533 234667788899999999999888763210 22 468999999876 321 12334
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~ 235 (325)
.| .+|...+.....+..+ .|++++.++||.+..+..................+ ++.......+++++|+|+++
T Consensus 180 ~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~i 259 (301)
T 3tjr_A 180 TYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDESVSADDVARLT 259 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCCCCHHHHHHHH
Confidence 67 6777666555554443 48999999999998652110000000000000011 12223345689999999999
Q ss_pred HHHHcCCC
Q 020476 236 YEALSNPS 243 (325)
Q Consensus 236 ~~~~~~~~ 243 (325)
+.+++.+.
T Consensus 260 ~~~l~~~~ 267 (301)
T 3tjr_A 260 ADAILANR 267 (301)
T ss_dssp HHHHHHTC
T ss_pred HHHHhcCC
Confidence 99998764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.2e-19 Score=145.44 Aligned_cols=198 Identities=15% Similarity=0.137 Sum_probs=135.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhCC----CCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQG----STAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~~----~d~vi~~a 94 (325)
|++++||||+|+||++++++|+++|++|++++|+.+........ .....+..+|+.|.+++.++++. .|+|||+|
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~A 80 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSA 80 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECC
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeC
Confidence 46899999999999999999999999999999987654332211 11112456799999988888764 39999999
Q ss_pred CCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHH
Q 020476 95 GTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC 169 (325)
Q Consensus 95 ~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~ 169 (325)
|.... .....+.+...+++|+.++.++++++... .....++|++||... +.. .+....| .+|..
T Consensus 81 g~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~--~~~---------~~~~~~Y~asKaa 149 (230)
T 3guy_A 81 GSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAA--QQP---------KAQESTYCAVKWA 149 (230)
T ss_dssp CCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGG--TSC---------CTTCHHHHHHHHH
T ss_pred CcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeeccc--CCC---------CCCCchhHHHHHH
Confidence 97533 23456778889999999999988876542 122238999999876 321 1234467 77877
Q ss_pred HHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 170 REWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.+.....+..+ .++++..++||.+..+...... .......+.+.+|+|++++.++..+.
T Consensus 150 ~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~~~dvA~~i~~l~~~~~ 211 (230)
T 3guy_A 150 VKGLIESVRLELKGKPMKIIAVYPGGMATEFWETSG---------------KSLDTSSFMSAEDAALMIHGALANIG 211 (230)
T ss_dssp HHHHHHHHHHHTTTSSCEEEEEEECCC-------------------------------CCCHHHHHHHHHHHCCEET
T ss_pred HHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhcC---------------CCCCcccCCCHHHHHHHHHHHHhCcC
Confidence 77666666554 3899999999998766321110 01112457899999999999997654
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.80 E-value=5.9e-19 Score=147.76 Aligned_cols=205 Identities=13% Similarity=0.132 Sum_probs=135.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+....... .........+|+.|.+++.++++ ++|
T Consensus 4 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 4 DKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998755332211 01111234579999988877664 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
++|||||.... .....+.+...+++|+.++..+.+++.... .+.+++|++||... +.. .+....
T Consensus 84 ~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~--~~~---------~~~~~~ 152 (264)
T 3tfo_A 84 VLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGA--LSV---------VPTAAV 152 (264)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CTTCHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHH--ccc---------CCCChh
Confidence 99999997533 234567788899999999887776653210 35578999999876 321 122345
Q ss_pred h-HHHHHHHHHHHHHhhcC-CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 164 Y-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
| .+|...+.....+..+. ++++..++||.+..+...... .... .... ......+...+|+|++++.+++.
T Consensus 153 Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~---~~~~----~~~~-~~~~~~~~~pedvA~~v~~l~s~ 224 (264)
T 3tfo_A 153 YCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTIT---HEET----MAAM-DTYRAIALQPADIARAVRQVIEA 224 (264)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC-------------------------------CCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCccccccc---chhH----HHHH-HhhhccCCCHHHHHHHHHHHhcC
Confidence 7 77777666665555443 899999999999876321110 0000 0000 00111257899999999999998
Q ss_pred CC
Q 020476 242 PS 243 (325)
Q Consensus 242 ~~ 243 (325)
+.
T Consensus 225 ~~ 226 (264)
T 3tfo_A 225 PQ 226 (264)
T ss_dssp CT
T ss_pred Cc
Confidence 76
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=143.66 Aligned_cols=210 Identities=14% Similarity=0.031 Sum_probs=140.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEE-e--cCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-T--RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~--r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
++++||||+|+||+++++.|+++|++|+++ + |++++....... ..+.++.|.+++.++++ ++|+|
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~g~iD~l 76 (244)
T 1zmo_A 2 VIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESE-----NPGTIALAEQKPERLVDATLQHGEAIDTI 76 (244)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHH-----STTEEECCCCCGGGHHHHHGGGSSCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHH-----hCCCcccCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999999999999999999 6 876543322111 11345556666655543 68999
Q ss_pred EECCCCCCC------CCCChhhHHHHHHHhhHHHHHHHHHHh----cCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 91 VNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLIN----ESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 91 i~~a~~~~~------~~~~~~~~~~~~~~nv~~~~~ll~~~~----~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|||||.... .+...+.++..+++|+.++.++++++. + .+.+++|++||... +.. .+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~--~~~g~iv~isS~~~--~~~---------~~~ 143 (244)
T 1zmo_A 77 VSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRA--AGGASVIFITSSVG--KKP---------LAY 143 (244)
T ss_dssp EECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCGGG--TSC---------CTT
T ss_pred EECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCcEEEEECChhh--CCC---------CCC
Confidence 999997532 234566788899999999988877764 4 45678999999876 331 123
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchH--HHH-HHHc-CCCCCCCcceeeeccHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMI--PLF-MMFA-GGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~--~~~-~~~~-~~~~~~~~~~~~~v~v~D~a 232 (325)
...| .+|...+.....+..+ .+++++.++||.+..+.......+. ... .... ..|. ..+...+|+|
T Consensus 144 ~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~pe~vA 217 (244)
T 1zmo_A 144 NPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPL------GRLGRPDEMG 217 (244)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTT------CSCBCHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCC------CCCcCHHHHH
Confidence 4567 7777766665554443 4899999999998776420001110 001 1111 1122 1367899999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++++.++.... ..| .+.+.+|.
T Consensus 218 ~~v~~l~s~~~~~~tG~~i~vdgG~ 242 (244)
T 1zmo_A 218 ALITFLASRRAAPIVGQFFAFTGGY 242 (244)
T ss_dssp HHHHHHHTTTTGGGTTCEEEESTTC
T ss_pred HHHHHHcCccccCccCCEEEeCCCC
Confidence 99999998644 334 77776663
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.80 E-value=9.1e-19 Score=151.37 Aligned_cols=217 Identities=12% Similarity=0.046 Sum_probs=145.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEe-cCCCcccccCC-----CCCccccCceeecCCc---------------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP--------------- 78 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~d~~--------------- 78 (325)
.+++|||||+|+||.++++.|+++|++|++++ |+.+....... ......+..+|+.|.+
T Consensus 46 ~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 125 (328)
T 2qhx_A 46 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 125 (328)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCC-------CCBCH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCchhcccccccccccccc
Confidence 46899999999999999999999999999999 87644322110 0011124468999988
Q ss_pred --hhHhhhC-------CCCEEEECCCCCCCC---CCC--------------hhhHHHHHHHhhHHHHHHHHHHhcCC--C
Q 020476 79 --QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINESP--E 130 (325)
Q Consensus 79 --~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~nv~~~~~ll~~~~~~~--~ 130 (325)
++.++++ ++|+||||||..... ... .+.+...+++|+.++..+++++.... .
T Consensus 126 ~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~ 205 (328)
T 2qhx_A 126 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 205 (328)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777665 789999999975322 223 55677889999999988887765310 2
Q ss_pred C------CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc
Q 020476 131 G------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA 200 (325)
Q Consensus 131 ~------~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~ 200 (325)
+ .+++|++||... +.. .+....| .+|...+.....+..+ .+++++.++||.+..+. ..
T Consensus 206 ~~~~~~~~g~IV~isS~~~--~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~~ 273 (328)
T 2qhx_A 206 PAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-DM 273 (328)
T ss_dssp CGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-CS
T ss_pred CCcCCCCCcEEEEECchhh--ccC---------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-cc
Confidence 3 578999999865 321 1233467 6777666655555443 48999999999998876 22
Q ss_pred ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 201 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
...... ......|++ ..+...+|+|++++.++.... .+.++++.+|..
T Consensus 274 ~~~~~~--~~~~~~p~~-----~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 324 (328)
T 2qhx_A 274 PPAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYS 324 (328)
T ss_dssp CHHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred cHHHHH--HHHhhCCCC-----CCCCCHHHHHHHHHHHhCccccCccCcEEEECCCcc
Confidence 211111 112222222 036789999999999996432 344888887754
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.80 E-value=4.9e-19 Score=148.48 Aligned_cols=198 Identities=15% Similarity=0.099 Sum_probs=134.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.+++|||||+|+||++++++|+++|++|++++|+.++...... .........+|+.|.+++.++++ ++|
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 4689999999999999999999999999999998765332211 11111244689999988877664 589
Q ss_pred EEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+||||||.... .....+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+...
T Consensus 109 ~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 177 (262)
T 3rkr_A 109 VLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAG--KNP---------VADGA 177 (262)
T ss_dssp EEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCS--SCC---------CTTCH
T ss_pred EEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhh--cCC---------CCCCc
Confidence 99999997211 33456778889999999988888775321 045679999999876 321 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|...+.....+..+ .++++..++||.+..+...... .......++..+|+|+++..+
T Consensus 178 ~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~---------------~~~~~~~~~~p~dvA~~v~~l 242 (262)
T 3rkr_A 178 AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS---------------AKKSALGAIEPDDIADVVALL 242 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC-------------------------------CCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc---------------cccccccCCCHHHHHHHHHHH
Confidence 57 6777666655555443 5899999999998766321110 011123467999999999999
Q ss_pred HcCCC
Q 020476 239 LSNPS 243 (325)
Q Consensus 239 ~~~~~ 243 (325)
+..+.
T Consensus 243 ~s~~~ 247 (262)
T 3rkr_A 243 ATQAD 247 (262)
T ss_dssp HTCCT
T ss_pred hcCcc
Confidence 98754
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.9e-19 Score=150.36 Aligned_cols=223 Identities=9% Similarity=0.017 Sum_probs=148.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc------------cc----cCCCCCccccCceeecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------------EL----IFPGKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~------------~~----~~~~~~~~~~~~~d~~d~~~~~~~ 83 (325)
.++++||||+|.||.++++.|+++|++|++++|+.... .. ............+|+.|.+++.++
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 107 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQAA 107 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHH
Confidence 36899999999999999999999999999999974311 00 000111112446899999888777
Q ss_pred hC-------CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCC
Q 020476 84 IQ-------GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTS 149 (325)
Q Consensus 84 ~~-------~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~ 149 (325)
++ ++|++|||||.... .+...+.+...+++|+.++..+++++... ..+.+++|++||... +..
T Consensus 108 ~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~Iv~isS~~~--~~~- 184 (299)
T 3t7c_A 108 VDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGSIVFTSSIGG--LRG- 184 (299)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEEEEEECCGGG--TSC-
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhh--ccC-
Confidence 64 79999999997532 23467788899999999999888876431 023568999999876 321
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-----------hHHHHHHHcCC
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-----------MIPLFMMFAGG 214 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-----------~~~~~~~~~~~ 214 (325)
.+....| .+|...+.....+..+ .|+++..++||.|.++....... .........
T Consensus 185 --------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 254 (299)
T 3t7c_A 185 --------AENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVAS-- 254 (299)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHH--
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHh--
Confidence 1234467 7777766666555544 38999999999999875321100 000000000
Q ss_pred CCCCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCCC
Q 020476 215 PLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 215 ~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
....... ..+...+|+|++++.++.... .+.++++.+|..+
T Consensus 255 ~~~~~~p-~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~~l 298 (299)
T 3t7c_A 255 RQMHVLP-IPYVEPADISNAILFLVSDDARYITGVSLPVDGGALL 298 (299)
T ss_dssp HHHSSSS-CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred hhhcccC-cCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCccc
Confidence 0000111 347899999999999997643 3448888887543
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=145.19 Aligned_cols=215 Identities=15% Similarity=0.111 Sum_probs=140.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
|+++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.++++ ++|++||
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvn 80 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVN 80 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEE
Confidence 5899999999999999999999999999999986543322110 0011244679999998887764 6899999
Q ss_pred CCCCCC-C---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 93 LAGTPI-G---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 93 ~a~~~~-~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||... . ...+.+.+...+++|+.++.++++++... ..+.+++|++||... +.. .+....| .
T Consensus 81 nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~---------~~~~~~Y~a 149 (248)
T 3asu_A 81 NAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAG--SWP---------YAGGNVYGA 149 (248)
T ss_dssp CCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred CCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchh--ccC---------CCCCchHHH
Confidence 999642 1 33456778889999999988887776411 035679999999876 321 1234467 7
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEc-CCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLG-KDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
+|...+.....+..+ .+++++.++||.+.| +..... ...... ..........+++.+|+|++++.++..
T Consensus 150 sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~--~~~~~~-----~~~~~~~~~~~~~p~dvA~~v~~l~s~ 222 (248)
T 3asu_A 150 TKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVR--FKGDDG-----KAEKTYQNTVALTPEDVSEAVWWVSTL 222 (248)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC-----------------------------CCBCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhc--ccCchH-----HHHHHHhccCCCCHHHHHHHHHHHhcC
Confidence 777777666555443 489999999999984 421100 000000 000000112357999999999999987
Q ss_pred CC--CCceEEeeCC
Q 020476 242 PS--YRGVINGTAP 253 (325)
Q Consensus 242 ~~--~~~~~~~~~~ 253 (325)
+. ....+.+...
T Consensus 223 ~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 223 PAHVNINTLEMMPV 236 (248)
T ss_dssp CTTCCCCEEEECCT
T ss_pred CccceeeEEEEccc
Confidence 54 2335555543
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.2e-19 Score=152.02 Aligned_cols=224 Identities=8% Similarity=-0.023 Sum_probs=145.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-------cCCCCCccccCceeecCCchhHhhhC-----
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
...++++||||+|.||+++++.|+++|++|++++|....... ............+|+.|.+++.++++
T Consensus 9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 88 (262)
T 3ksu_A 9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE 88 (262)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999886433111 11111112245689999998887765
Q ss_pred --CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 86 --GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 86 --~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
++|++|||||.... .+...+.+...+++|+.++..+++++.....+.+++|++||... +... +.
T Consensus 89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~--~~~~---------~~ 157 (262)
T 3ksu_A 89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLL--AAYT---------GF 157 (262)
T ss_dssp HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHH--HHHH---------CC
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhh--ccCC---------CC
Confidence 68999999997533 23456778889999999999999998763224468999999876 3211 12
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
...| .+|...+.....+..+ .++++..++||.+..+..... ..... ............+...+|+|++++
T Consensus 158 ~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~--~~~~~----~~~~~~~~~~~r~~~pedvA~~v~ 231 (262)
T 3ksu_A 158 YSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQ--ETKES----TAFHKSQAMGNQLTKIEDIAPIIK 231 (262)
T ss_dssp CCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTC--C----------------CCCCSCCGGGTHHHHH
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcccccc--CchHH----HHHHHhcCcccCCCCHHHHHHHHH
Confidence 3457 6776666666655554 389999999998875421000 00000 000111122234678899999999
Q ss_pred HHHcCCC--CCceEEeeCCCCCCH
Q 020476 237 EALSNPS--YRGVINGTAPNPVRL 258 (325)
Q Consensus 237 ~~~~~~~--~~~~~~~~~~~~~s~ 258 (325)
.++.... .+.++++.+|.....
T Consensus 232 ~L~s~~~~itG~~i~vdGg~~~~~ 255 (262)
T 3ksu_A 232 FLTTDGWWINGQTIFANGGYTTRE 255 (262)
T ss_dssp HHHTTTTTCCSCEEEESTTCCCC-
T ss_pred HHcCCCCCccCCEEEECCCccCCC
Confidence 9998632 344888888764443
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.9e-19 Score=153.09 Aligned_cols=224 Identities=14% Similarity=0.129 Sum_probs=147.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc---------c-------CCCCCccccCceeecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL---------I-------FPGKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---------~-------~~~~~~~~~~~~d~~d~~~~~~~ 83 (325)
.+++|||||+|+||+++++.|+++|++|++++|+...... . ...........+|+.|.+++.++
T Consensus 46 gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~ 125 (317)
T 3oec_A 46 GKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAV 125 (317)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 4689999999999999999999999999999886322110 0 00011112345799999888777
Q ss_pred hC-------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCC
Q 020476 84 IQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSE 150 (325)
Q Consensus 84 ~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~ 150 (325)
++ ++|++|||||.... .+...+.+...+++|+.++..+++++.... ...+++|++||... +...
T Consensus 126 ~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~Iv~isS~~~--~~~~- 202 (317)
T 3oec_A 126 VDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGSVIFVSSTVG--LRGA- 202 (317)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEEEEEECCGGG--SSCC-
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCEEEEECcHHh--cCCC-
Confidence 65 79999999997533 344667788899999999998888763210 22467999999876 3211
Q ss_pred CceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC--------C-C
Q 020476 151 TEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--------L-G 217 (325)
Q Consensus 151 ~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~--------~-~ 217 (325)
+....| .+|...+.....+..+ .|+++..++||.|.++..... .....+......+ + .
T Consensus 203 --------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 273 (317)
T 3oec_A 203 --------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNE-KLLKMFLPHLENPTREDAAELFSQ 273 (317)
T ss_dssp --------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCH-HHHHHHCTTCSSCCHHHHHHHHTT
T ss_pred --------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccch-hhhhhhhhhccccchhHHHHHHhh
Confidence 223457 7777776666655554 489999999999987631100 0000000000000 0 0
Q ss_pred CCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 218 SGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 218 ~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
.......+.+++|+|++++.++.... .+.++++.+|..
T Consensus 274 ~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~~ 314 (317)
T 3oec_A 274 LTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQL 314 (317)
T ss_dssp TCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred hccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcchh
Confidence 01111468899999999999986543 344888888753
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=148.14 Aligned_cols=213 Identities=14% Similarity=0.119 Sum_probs=138.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
++++||||+|+||++++++|+++|++|++++|+.++...... .........+|+.|.+++.++++ ++|+|
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 689999999999999999999999999999998654332111 00111244689999998887775 35999
Q ss_pred EECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCC-CEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 91 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVR-PSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 91 i~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~-~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|||||.... .....+.++..+++|+.++.++.+++ ++ .+.+ ++|++||... +.. .+..
T Consensus 102 vnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~--~~~g~~IV~isS~~~--~~~---------~~~~ 168 (272)
T 2nwq_A 102 INNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIA--HGAGASIVNLGSVAG--KWP---------YPGS 168 (272)
T ss_dssp EECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--TSC---------CTTC
T ss_pred EECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCcEEEEeCCchh--ccC---------CCCC
Confidence 999997431 23456778889999999977766554 34 3456 9999999876 321 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|...+.....+..+ .|+++++++||.+.++..... ........ .... ....++..+|+|++++.
T Consensus 169 ~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~--~~~~~~~~--~~~~---~~~~~~~pedvA~~v~~ 241 (272)
T 2nwq_A 169 HVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVR--FGGDQARY--DKTY---AGAHPIQPEDIAETIFW 241 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC---------------------------CCCCBCHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcc--cccchHHH--HHhh---ccCCCCCHHHHHHHHHH
Confidence 457 6777777666655543 489999999999987642110 00000000 0000 01125789999999999
Q ss_pred HHcCCC-CC-ceEEeeCC
Q 020476 238 ALSNPS-YR-GVINGTAP 253 (325)
Q Consensus 238 ~~~~~~-~~-~~~~~~~~ 253 (325)
++..+. .. ..+.+.++
T Consensus 242 l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 242 IMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp HHTSCTTEEEEEEEEEET
T ss_pred HhCCCccCccceEEEeec
Confidence 998754 22 35555544
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.79 E-value=5.8e-19 Score=150.12 Aligned_cols=218 Identities=13% Similarity=0.051 Sum_probs=144.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccCC-----CCCccccCceeecC----CchhHhhhC--
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFP-----GKKTRFFPGVMIAE----EPQWRDCIQ-- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~-----~~~~~~~~~~d~~d----~~~~~~~~~-- 85 (325)
...++++||||+|+||+++++.|+++|++|++++|+. +....... ......+..+|+.| .+++.++++
T Consensus 21 l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 21 MEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 3457899999999999999999999999999999987 43221110 01111244689999 777766654
Q ss_pred -----CCCEEEECCCCCCCCC-------------CChhhHHHHHHHhhHHHHHHHHHHhcCC--CC------CCCEEEEe
Q 020476 86 -----GSTAVVNLAGTPIGTR-------------WSSEIKKEIKESRIRVTSKVVDLINESP--EG------VRPSVLVS 139 (325)
Q Consensus 86 -----~~d~vi~~a~~~~~~~-------------~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~------~~~~v~~S 139 (325)
++|+||||||...... ...+.+...+++|+.++..+++++.... .+ .+++|++|
T Consensus 101 ~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iv~is 180 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNPNCTSSNLSIVNLC 180 (288)
T ss_dssp HHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC--------CCCEEEEEEC
T ss_pred HHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEe
Confidence 7999999999753221 3345667889999999999888775421 12 46899999
Q ss_pred eeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC
Q 020476 140 ATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP 215 (325)
Q Consensus 140 s~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~ 215 (325)
|... +.. .+....| .+|...+.....+..+ .|+++++++||.++++. ....... .......+
T Consensus 181 S~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~~~~--~~~~~~~p 246 (288)
T 2x9g_A 181 DAMV--DQP---------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGEEEK--DKWRRKVP 246 (288)
T ss_dssp CTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCHHHH--HHHHHTCT
T ss_pred cccc--cCC---------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccChHHH--HHHHhhCC
Confidence 9866 321 1233457 6776666555544443 48999999999999886 2111111 11122222
Q ss_pred CCCCcceeee-ccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 216 LGSGQQWFSW-IHLDDIVNLIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 216 ~~~~~~~~~~-v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
.+ .+ ...+|+|++++.++.... ..| .+++.+|..
T Consensus 247 ~~------r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~ 284 (288)
T 2x9g_A 247 LG------RREASAEQIADAVIFLVSGSAQYITGSIIKVDGGLS 284 (288)
T ss_dssp TT------SSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred CC------CCCCCHHHHHHHHHHHhCccccCccCCEEEECcchh
Confidence 22 24 789999999999997532 334 777777743
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.79 E-value=3.8e-18 Score=139.22 Aligned_cols=216 Identities=13% Similarity=0.090 Sum_probs=147.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~~ 96 (325)
.++++||||++.||+++++.|++.|.+|++.+|+.+........ ......+|+.|+++++++++ ++|++|||||.
T Consensus 11 GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~~~--~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi 88 (242)
T 4b79_A 11 GQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPRHP--RIRREELDITDSQRLQRLFEALPRLDVLVNNAGI 88 (242)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCCCT--TEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhhcC--CeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence 57999999999999999999999999999999988765433221 11244689999998887765 78999999997
Q ss_pred CCC-CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHH
Q 020476 97 PIG-TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWE 173 (325)
Q Consensus 97 ~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~ 173 (325)
..+ ...+.+.++..+++|+.++..+.+++..+ ..+..++|.+||.... .+ .+....| .+|.....+
T Consensus 89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~-~~----------~~~~~~Y~asKaav~~l 157 (242)
T 4b79_A 89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST-FG----------SADRPAYSASKGAIVQL 157 (242)
T ss_dssp CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT-SC----------CSSCHHHHHHHHHHHHH
T ss_pred CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc-CC----------CCCCHHHHHHHHHHHHH
Confidence 533 44456788999999999977766654332 0133789999998651 11 1234567 677666555
Q ss_pred HHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC---CCc
Q 020476 174 GTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRG 246 (325)
Q Consensus 174 ~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~ 246 (325)
......+ .|+++..+.||.|..+.......-.... ......|++. +...+|+|.+++.++.+.. .+.
T Consensus 158 tr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR------~g~peeiA~~v~fLaSd~a~~iTG~ 231 (242)
T 4b79_A 158 TRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLAR------WGEAPEVASAAAFLCGPGASFVTGA 231 (242)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCS------CBCHHHHHHHHHHHTSGGGTTCCSC
T ss_pred HHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCC------CcCHHHHHHHHHHHhCchhcCccCc
Confidence 5444443 4899999999999876321111111111 2233344432 6778999999999986543 344
Q ss_pred eEEeeCCC
Q 020476 247 VINGTAPN 254 (325)
Q Consensus 247 ~~~~~~~~ 254 (325)
++.+.+|.
T Consensus 232 ~l~VDGG~ 239 (242)
T 4b79_A 232 VLAVDGGY 239 (242)
T ss_dssp EEEESTTG
T ss_pred eEEECccH
Confidence 77777663
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.1e-17 Score=140.78 Aligned_cols=223 Identities=13% Similarity=0.001 Sum_probs=151.6
Q ss_pred HhhhcCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCCCcc-cccCC-----CCCccccCceeecCCchhHhhhC-
Q 020476 15 LLQASQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ- 85 (325)
Q Consensus 15 ~~~~~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~-----~~~~~~~~~~d~~d~~~~~~~~~- 85 (325)
.+....++++||||+ |+||.+++++|+++|++|++++|+.... ..... ......+..+|+.|.+++.++++
T Consensus 15 ~~~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~ 94 (267)
T 3gdg_A 15 QLSLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKD 94 (267)
T ss_dssp HHCCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHH
T ss_pred ccCcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHH
Confidence 344556799999999 8999999999999999999999876543 11100 01112255689999988877664
Q ss_pred ------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCc
Q 020476 86 ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETE 152 (325)
Q Consensus 86 ------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~ 152 (325)
++|+||||||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||.... ++..
T Consensus 95 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~~-~~~~--- 168 (267)
T 3gdg_A 95 VVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKE--RGTGSLVITASMSGH-IANF--- 168 (267)
T ss_dssp HHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCGGGT-SCCS---
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHH--cCCceEEEEcccccc-ccCC---
Confidence 67999999997533 23356778889999999999988877 44 355799999997651 2210
Q ss_pred eecCCCCCCCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 153 VFDESSPSGNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 153 ~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+....| .+|...+.....+..+. .+++..+.||.+..+......... ........+ ...+.+.+
T Consensus 169 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~-~~~~~~~~~------~~r~~~~~ 236 (267)
T 3gdg_A 169 -----PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKET-QQLWHSMIP------MGRDGLAK 236 (267)
T ss_dssp -----SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHH-HHHHHTTST------TSSCEETH
T ss_pred -----CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHH-HHHHHhcCC------CCCCcCHH
Confidence 0123457 77877776666665543 379999999999876432111110 011122222 23467899
Q ss_pred HHHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 230 DIVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
|+|++++.++.... .+.++++.+|..
T Consensus 237 dva~~~~~l~s~~~~~itG~~i~vdgG~~ 265 (267)
T 3gdg_A 237 ELKGAYVYFASDASTYTTGADLLIDGGYT 265 (267)
T ss_dssp HHHHHHHHHHSTTCTTCCSCEEEESTTGG
T ss_pred HHHhHhheeecCccccccCCEEEECCcee
Confidence 99999999997643 344888888753
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.6e-19 Score=155.58 Aligned_cols=213 Identities=12% Similarity=0.007 Sum_probs=134.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----C--CccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----K--KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~--~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++||||||+|+||.+++++|+++|++|++++|+.++....... . .......+|+.|.+++.++++ +
T Consensus 8 ~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (319)
T 3ioy_A 8 GRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGP 87 (319)
T ss_dssp TCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCC
Confidence 45899999999999999999999999999999987653322110 0 011244679999988877764 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--------CCCCCEEEEeeeeeeeecCCCCceec
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--------EGVRPSVLVSATALGYYGTSETEVFD 155 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--------~~~~~~v~~Ss~~v~~~g~~~~~~~~ 155 (325)
+|+|||+||.... .....+.+...+++|+.++.++++++.... .+.+++|++||... +...
T Consensus 88 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a~--~~~~------ 159 (319)
T 3ioy_A 88 VSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMAA--FLAA------ 159 (319)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGGG--TCCC------
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEeccccc--ccCC------
Confidence 7999999997532 234567788899999999999888765421 13567999999876 3321
Q ss_pred CCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH----HHHcCCCCCCC-cceeeec
Q 020476 156 ESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF----MMFAGGPLGSG-QQWFSWI 226 (325)
Q Consensus 156 e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~v 226 (325)
+....| .+|...+...+.+.. ..|+++++++||.|.++...........+ .......+... ......+
T Consensus 160 ---~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (319)
T 3ioy_A 160 ---GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERLAGVHEFGM 236 (319)
T ss_dssp ---SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------CCGGGSSB
T ss_pred ---CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHHHHhhhcCC
Confidence 223457 677744444433322 24899999999999876422110000000 00000001000 1111227
Q ss_pred cHHHHHHHHHHHHcCCC
Q 020476 227 HLDDIVNLIYEALSNPS 243 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~ 243 (325)
+++|+|++++.+++.+.
T Consensus 237 ~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 237 EPDVIGARVIEAMKANR 253 (319)
T ss_dssp CHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCC
Confidence 99999999999998864
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=2.4e-18 Score=142.97 Aligned_cols=206 Identities=15% Similarity=0.110 Sum_probs=138.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
.++++||||+|+||+++++.|+++|++|++++|+.++...... .........+|+.|++++.++++ ++|
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 86 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD 86 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999998654322111 01111244679999988877664 799
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||||||.... .+...+.++..+++|+.++.++++++... ..+ +++|++||... +.. .+....
T Consensus 87 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~--~~~---------~~~~~~ 154 (247)
T 2jah_A 87 ILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAG--RVN---------VRNAAV 154 (247)
T ss_dssp EEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG--TCC---------CTTCHH
T ss_pred EEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHh--cCC---------CCCCcH
Confidence 99999997532 23456678889999999999888876431 024 79999999865 321 123345
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+.. ..|++++.++||.+.++....... ..........+ + ...+.+.+|+|++++.++
T Consensus 155 Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~-~~~~~~~~~~~-~----~~~~~~pedvA~~v~~l~ 228 (247)
T 2jah_A 155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITH-TATKEMYEQRI-S----QIRKLQAQDIAEAVRYAV 228 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCC-HHHHHHHHHHT-T----TSCCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccc-hhhHHHHHhcc-c----ccCCCCHHHHHHHHHHHh
Confidence 7 667655555444433 248999999999998764211110 00001011011 0 112589999999999999
Q ss_pred cCCC
Q 020476 240 SNPS 243 (325)
Q Consensus 240 ~~~~ 243 (325)
.++.
T Consensus 229 s~~~ 232 (247)
T 2jah_A 229 TAPH 232 (247)
T ss_dssp HSCT
T ss_pred CCCc
Confidence 8764
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.8e-19 Score=146.88 Aligned_cols=213 Identities=15% Similarity=0.104 Sum_probs=145.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
.++++||||+|+||++++++|+++| +.|++++|+.+........ ........+|+.|.+++.++++ ++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 4689999999999999999999885 7899999986553332211 0111244679999988877764 7899
Q ss_pred EEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 90 VVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 90 vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|||||.... ...+.+.++..+++|+.++.++++++ ++ .+ +++|++||... +.. .+..
T Consensus 82 lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~--~~-g~iv~isS~~~--~~~---------~~~~ 147 (254)
T 3kzv_A 82 LVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKK--TN-GNVVFVSSDAC--NMY---------FSSW 147 (254)
T ss_dssp EEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HT-CEEEEECCSCC--CCS---------SCCS
T ss_pred EEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--cC-CeEEEEcCchh--ccC---------CCCc
Confidence 9999997422 24466778889999999999998887 44 34 79999999876 321 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc-CCceEEEEEeceEEcCCCCcc----------cchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 162 NDY-LAEVCREWEGTALKVN-KDVRLALIRIGIVLGKDGGAL----------AKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~-~~~~~~ilRp~~i~g~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
..| .+|...+.....+..+ .++++..++||.+..+..... ......+ ....+ ...+.+.+
T Consensus 148 ~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~r~~~p~ 219 (254)
T 3kzv_A 148 GAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMF--RGLKE------NNQLLDSS 219 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHH--HHHHT------TC----CH
T ss_pred chHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHH--HHHHh------cCCcCCcc
Confidence 467 7787777666665554 489999999999988743211 0111111 11111 23478899
Q ss_pred HHHHHHHHHHcCCC---CCc-eEEeeCCC
Q 020476 230 DIVNLIYEALSNPS---YRG-VINGTAPN 254 (325)
Q Consensus 230 D~a~a~~~~~~~~~---~~~-~~~~~~~~ 254 (325)
|+|++++.++.... ..| .+++.+++
T Consensus 220 dva~~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 220 VPATVYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp HHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred cHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence 99999999997652 344 77776664
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.78 E-value=2e-19 Score=149.74 Aligned_cols=198 Identities=18% Similarity=0.145 Sum_probs=136.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-------CCCccccCceeecCCchhHhhhC-----
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
...++++||||+|+||.++++.|+++|++|++++|+.++...... ......+..+|+.|.+++.++++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 345789999999999999999999999999999998755332211 00111244689999888877664
Q ss_pred --CCCEEEECCCCCCCC--CCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 --GSTAVVNLAGTPIGT--RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 --~~d~vi~~a~~~~~~--~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++|||||..... ....+.+...+++|+.++..+++++ ++ .+.+++|++||.... ++.
T Consensus 85 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~--~~~g~iv~isS~~~~-~~~--------- 152 (250)
T 3nyw_A 85 YGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKV--QKNGYIFNVASRAAK-YGF--------- 152 (250)
T ss_dssp HCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECC-----------------
T ss_pred cCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEEccHHhc-CCC---------
Confidence 689999999975332 3345567888999999988888876 33 355789999998762 211
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
++...| .+|...+.....+..+ .|+++..++||.+..+. .. .. ... .....+++.+|+|+
T Consensus 153 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~-------~~---~~-~~~----~~~~~~~~p~dva~ 216 (250)
T 3nyw_A 153 -ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDM-------AK---KA-GTP----FKDEEMIQPDDLLN 216 (250)
T ss_dssp -CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHH-------HH---HT-TCC----SCGGGSBCHHHHHH
T ss_pred -CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCch-------hh---hc-CCC----cccccCCCHHHHHH
Confidence 124567 7777666655555443 48999999999886541 11 00 011 11234789999999
Q ss_pred HHHHHHcCCC
Q 020476 234 LIYEALSNPS 243 (325)
Q Consensus 234 a~~~~~~~~~ 243 (325)
+++.+++.+.
T Consensus 217 ~v~~l~s~~~ 226 (250)
T 3nyw_A 217 TIRCLLNLSE 226 (250)
T ss_dssp HHHHHHTSCT
T ss_pred HHHHHHcCCC
Confidence 9999998765
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.78 E-value=1.6e-18 Score=146.61 Aligned_cols=212 Identities=13% Similarity=0.031 Sum_probs=140.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..+++|||||+|+||.+++++|+++|++|++++|+.+........ ........+|+.|.+++.++++ +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 111 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR 111 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 346899999999999999999999999999999987543322110 0000245689999988877664 6
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC--CCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESP--EG--VRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~--~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|+||||||.... .+...+.++..+++|+.++..+.+++.... .+ .+++|++||... +.. .
T Consensus 112 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~--~~~---------~ 180 (281)
T 4dry_A 112 LDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISA--QTP---------R 180 (281)
T ss_dssp CSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGG--TCC---------C
T ss_pred CCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHh--CCC---------C
Confidence 8999999997422 235677888899999999777666553310 22 468999999865 221 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
+....| .+|...+.....+..+ .++++..++||.+..+....... .... .........+...+|+|++
T Consensus 181 ~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~-------~~~~-~~~~~~~~~~~~pedvA~~ 252 (281)
T 4dry_A 181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMST-------GVLQ-ANGEVAAEPTIPIEHIAEA 252 (281)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------C-------EEEC-TTSCEEECCCBCHHHHHHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcc-------hhhh-hhhcccccCCCCHHHHHHH
Confidence 234467 6777666665555443 58999999999988763211100 0000 0111122347899999999
Q ss_pred HHHHHcCCCCCceEE
Q 020476 235 IYEALSNPSYRGVIN 249 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~ 249 (325)
++.+++++....+.+
T Consensus 253 v~fL~s~~~~~~i~~ 267 (281)
T 4dry_A 253 VVYMASLPLSANVLT 267 (281)
T ss_dssp HHHHHHSCTTEEEEE
T ss_pred HHHHhCCCccCcccc
Confidence 999999887544443
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.78 E-value=9.8e-19 Score=148.38 Aligned_cols=206 Identities=12% Similarity=0.031 Sum_probs=141.2
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCCccccCceeecCCchhHhh
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~d~~~~~~~ 83 (325)
.|....++++||||+|.||++++++|+++|++|++++|+.++...... ......+..+|+.|.+++.++
T Consensus 4 ~m~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 83 (285)
T 3sc4_A 4 SMSLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAA 83 (285)
T ss_dssp --CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHH
T ss_pred CcCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence 344556789999999999999999999999999999998865332210 011112445799999888777
Q ss_pred hC-------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCC
Q 020476 84 IQ-------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSET 151 (325)
Q Consensus 84 ~~-------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~ 151 (325)
++ ++|++|||||.... .....+.+...+++|+.++.++++++.... .+.+++|++||... +...
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~-- 159 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSPPIR--LEPK-- 159 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCCCCC--CSGG--
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhh--ccCC--
Confidence 65 79999999997533 234567788899999999999999876531 24568999999765 2210
Q ss_pred ceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeecc
Q 020476 152 EVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 152 ~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
.+....| .+|...+.....+..+ .|+++..++||++.... +..... ....+ ...+..
T Consensus 160 ------~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~------~~~~~~-~~~~~------~~r~~~ 220 (285)
T 3sc4_A 160 ------WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATA------AVQNLL-GGDEA------MARSRK 220 (285)
T ss_dssp ------GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCH------HHHHHH-TSCCC------CTTCBC
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccH------HHHhhc-ccccc------ccCCCC
Confidence 0123457 7777777666655554 48999999998433221 111110 11111 123678
Q ss_pred HHHHHHHHHHHHcCCC
Q 020476 228 LDDIVNLIYEALSNPS 243 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~ 243 (325)
.+|+|++++.++.++.
T Consensus 221 pedvA~~~~~l~s~~~ 236 (285)
T 3sc4_A 221 PEVYADAAYVVLNKPS 236 (285)
T ss_dssp THHHHHHHHHHHTSCT
T ss_pred HHHHHHHHHHHhCCcc
Confidence 8999999999998764
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.78 E-value=8.7e-19 Score=146.96 Aligned_cols=218 Identities=14% Similarity=0.062 Sum_probs=141.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||+|+||+++++.|+++|++|++++|+.+...... ..........+|+.|++++.++++ ++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 3468999999999999999999999999999999865432211 111111234579999888776654 78
Q ss_pred CEEEECCCCC-CC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~-~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|+||||||.. .. .....+.+...+++|+.++.++++++.... .+.+++|++||... +... +..
T Consensus 86 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~~---------~~~ 154 (262)
T 1zem_A 86 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKGP---------PNM 154 (262)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSCC---------TTB
T ss_pred CEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhh--ccCC---------CCC
Confidence 9999999964 21 234567788899999999988888765410 24579999999876 3211 223
Q ss_pred Cch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCc-------------ccchHH-HH-HHHcCCCCCCCcce
Q 020476 162 NDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGA-------------LAKMIP-LF-MMFAGGPLGSGQQW 222 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~-------------~~~~~~-~~-~~~~~~~~~~~~~~ 222 (325)
..| .+|...+.....+.. ..++++++++||.+..+.... ...--. .. ......|+
T Consensus 155 ~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------ 228 (262)
T 1zem_A 155 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPM------ 228 (262)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTT------
T ss_pred chHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhcCCC------
Confidence 457 667655555444433 348999999999887652110 000000 01 11111222
Q ss_pred eeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 223 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
..+...+|+|++++.++.... ..| .+.+.+|
T Consensus 229 ~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 229 RRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp SSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 126788999999999987532 334 6666543
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.77 E-value=4.5e-18 Score=142.07 Aligned_cols=219 Identities=15% Similarity=0.078 Sum_probs=145.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC-CCcccccC----CCCCccccCceeecCCchhHhhhC---------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS-RSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~--------- 85 (325)
.++++||||+|+||.+++++|+++|++|+++.++ .+...... ..........+|+.|.+.+.++++
T Consensus 7 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 86 (255)
T 3icc_A 7 GKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQNR 86 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhccc
Confidence 4689999999999999999999999999987544 33222111 111111134578888877766553
Q ss_pred ----CCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 ----GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ----~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++||+||..... ....+..+..+++|+.++.++++++.......+++|++||... +.. .
T Consensus 87 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~--~~~---------~ 155 (255)
T 3icc_A 87 TGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT--RIS---------L 155 (255)
T ss_dssp HSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG--TSC---------C
T ss_pred ccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh--ccC---------C
Confidence 289999999975332 3356667888999999999999998763223458999999876 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|...+.....+..+ .++++..++||.+..+.......-.... ......++ ..+.+++|+|+
T Consensus 156 ~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~dva~ 229 (255)
T 3icc_A 156 PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAF------NRLGEVEDIAD 229 (255)
T ss_dssp TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTT------SSCBCHHHHHH
T ss_pred CCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCc------CCCCCHHHHHH
Confidence 223457 6777666665555443 4899999999999887432211111111 11111222 34678999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+++.++.... .+.++++.+|..
T Consensus 230 ~~~~l~s~~~~~~tG~~i~vdgG~~ 254 (255)
T 3icc_A 230 TAAFLASPDSRWVTGQLIDVSGGSC 254 (255)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSSTT
T ss_pred HHHHHhCcccCCccCCEEEecCCee
Confidence 9999986532 345888888753
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.77 E-value=3.3e-18 Score=144.63 Aligned_cols=222 Identities=14% Similarity=0.046 Sum_probs=146.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-------------cccc----CCCCCccccCceeecCCchhHh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-------------AELI----FPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~----~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
.++++||||+|+||+++++.|+++|++|++++|+... .... ...........+|+.|.+++.+
T Consensus 11 ~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 90 (277)
T 3tsc_A 11 GRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRK 90 (277)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 4689999999999999999999999999999985321 1000 0001111234578889888877
Q ss_pred hhC-------CCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHHhcCC--CC-CCCEEEEeeeeeeeecCC
Q 020476 83 CIQ-------GSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLINESP--EG-VRPSVLVSATALGYYGTS 149 (325)
Q Consensus 83 ~~~-------~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~-~~~~v~~Ss~~v~~~g~~ 149 (325)
+++ ++|++|||||..... +.+.+.++..+++|+.++.++++++.... .+ .+++|++||... +..
T Consensus 91 ~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~--~~~- 167 (277)
T 3tsc_A 91 VVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGSIILISSAAG--MKM- 167 (277)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC-
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCEEEEEccHhh--CCC-
Confidence 664 699999999976432 34667888999999999988887753310 22 468999999876 321
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCC-----CCCCCc
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG-----PLGSGQ 220 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~-----~~~~~~ 220 (325)
.+....| .+|...+.....+..+ .++++..++||.+..+..... ............ .+....
T Consensus 168 --------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 238 (277)
T 3tsc_A 168 --------QPFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGD-MVTAVGQAMETNPQLSHVLTPFL 238 (277)
T ss_dssp --------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHH-HHHHHHHHHHTCGGGTTTTCCSS
T ss_pred --------CCCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccch-hhhhhhhcccccHHHHHHhhhcc
Confidence 1223457 7787776666555544 489999999999987642110 000011110011 111112
Q ss_pred ceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 221 QWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
.. .+.+.+|+|++++.++.++. .+.++++.+|.
T Consensus 239 p~-r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 239 PD-WVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp SC-SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CC-CCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 22 48899999999999997643 34488888774
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=9.7e-18 Score=142.66 Aligned_cols=218 Identities=13% Similarity=0.085 Sum_probs=144.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEe-cCCCcccccCC-----CCCccccCceeecCCc--------------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLT-RSRSKAELIFP-----GKKTRFFPGVMIAEEP-------------- 78 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~~~-----~~~~~~~~~~d~~d~~-------------- 78 (325)
..++++||||+|+||+++++.|+++|++|++++ |+.+....... .........+|+.|.+
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 87 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVT 87 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcccccccccccccccc
Confidence 356899999999999999999999999999999 87644322110 0111124468999988
Q ss_pred ---hhHhhhC-------CCCEEEECCCCCCCC---CCC--------------hhhHHHHHHHhhHHHHHHHHHHhcC--C
Q 020476 79 ---QWRDCIQ-------GSTAVVNLAGTPIGT---RWS--------------SEIKKEIKESRIRVTSKVVDLINES--P 129 (325)
Q Consensus 79 ---~~~~~~~-------~~d~vi~~a~~~~~~---~~~--------------~~~~~~~~~~nv~~~~~ll~~~~~~--~ 129 (325)
++.++++ ++|++|||||..... ... .+.+...+++|+.++..+++++... .
T Consensus 88 ~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~ 167 (291)
T 1e7w_A 88 LFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAG 167 (291)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 7777665 789999999975322 223 5667788999999998888876531 0
Q ss_pred CC------CCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC
Q 020476 130 EG------VRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG 199 (325)
Q Consensus 130 ~~------~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~ 199 (325)
.+ .+++|++||... +.. .+....| .+|...+.....+..+ .+++++.++||.+..+. .
T Consensus 168 ~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~-~ 235 (291)
T 1e7w_A 168 TPAKHRGTNYSIINMVDAMT--NQP---------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D 235 (291)
T ss_dssp SCGGGSCSCEEEEEECCTTT--TSC---------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG-G
T ss_pred cCCCCCCCCcEEEEEechhh--cCC---------CCCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc-c
Confidence 33 478999999876 321 1234467 6777666555544443 48999999999987654 2
Q ss_pred cccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCCC
Q 020476 200 ALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~ 256 (325)
.. -... ......|++. .+...+|+|++++.++.... ..| ++++.+|..+
T Consensus 236 -~~--~~~~~~~~~~~p~~~-----r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~~~ 288 (291)
T 1e7w_A 236 -MP--PAVWEGHRSKVPLYQ-----RDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSL 288 (291)
T ss_dssp -SC--HHHHHHHHTTCTTTT-----SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred -CC--HHHHHHHHhhCCCCC-----CCCCHHHHHHHHHHHhCCcccCccCcEEEECCCccc
Confidence 11 1111 1122222210 26789999999999997532 344 7777777543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.76 E-value=2.2e-18 Score=146.37 Aligned_cols=203 Identities=14% Similarity=0.055 Sum_probs=137.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++|+||||+|+||++++++|+++|++|++++|++++....... .....+..+|+.|.+++.++++ +
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 356899999999999999999999999999999987543322110 0011244578889888776664 7
Q ss_pred CCEEEEC-CCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNL-AGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~-a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|+|||| |+.... .....+.....+++|+.++.++++++... ..+.+++|++||... +.. .+...
T Consensus 107 iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~~~ 175 (286)
T 1xu9_A 107 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAG--KVA---------YPMVA 175 (286)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGG--TSC---------CTTCH
T ss_pred CCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCccc--ccC---------CCCcc
Confidence 9999999 565322 22345667888999999998888876431 012468999999876 321 12344
Q ss_pred ch-HHHHHHHHHHHHHhh-----cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV-----NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~-----~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+.. ..++++++++||.+..+.. .. .. .+......++.+|+|++++
T Consensus 176 ~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~-------~~--~~------~~~~~~~~~~~~~vA~~i~ 240 (286)
T 1xu9_A 176 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETA-------MK--AV------SGIVHMQAAPKEECALEII 240 (286)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHH-------HH--HS------CGGGGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhH-------HH--hc------cccccCCCCCHHHHHHHHH
Confidence 57 677766655544433 3489999999998865421 00 00 0111235789999999999
Q ss_pred HHHcCCCCCceE
Q 020476 237 EALSNPSYRGVI 248 (325)
Q Consensus 237 ~~~~~~~~~~~~ 248 (325)
.++..+. .++|
T Consensus 241 ~~~~~~~-~~~~ 251 (286)
T 1xu9_A 241 KGGALRQ-EEVY 251 (286)
T ss_dssp HHHHTTC-SEEE
T ss_pred HHHhcCC-ceEE
Confidence 9998764 3443
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.1e-17 Score=143.46 Aligned_cols=211 Identities=13% Similarity=0.077 Sum_probs=143.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-----------CCCccccCceeecCCchhHhhhC---
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----------GKKTRFFPGVMIAEEPQWRDCIQ--- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----------~~~~~~~~~~d~~d~~~~~~~~~--- 85 (325)
.++++||||+|.||.+++++|+++|++|++++|+.++...... .........+|+.|.+++.++++
T Consensus 45 gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 45 GCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 3579999999999999999999999999999998875332211 01111234579999998887765
Q ss_pred ----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 ----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 ----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+||||||.... .....+.++..+++|+.++.++++++... ..+..++|++||... +...
T Consensus 125 ~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~~~--~~~~------- 195 (346)
T 3kvo_A 125 KKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISPPLN--LNPV------- 195 (346)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECCCCC--CCGG-------
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECCHHH--cCCC-------
Confidence 79999999997533 33456778889999999999998887321 145679999999875 3211
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
..+....| .+|...+.....+..+ .++++..+.|+.+.... +.. ...+ ......+...+|+|+
T Consensus 196 ~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~------~~~---~~~~-----~~~~~r~~~pedvA~ 261 (346)
T 3kvo_A 196 WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTA------AMD---MLGG-----PGIESQCRKVDIIAD 261 (346)
T ss_dssp GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCH------HHH---HHCC-------CGGGCBCTHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccH------HHH---hhcc-----ccccccCCCHHHHHH
Confidence 01223457 7777766666555554 48999999999644331 111 1111 111223678899999
Q ss_pred HHHHHHcCCC-CCceEEeeCC
Q 020476 234 LIYEALSNPS-YRGVINGTAP 253 (325)
Q Consensus 234 a~~~~~~~~~-~~~~~~~~~~ 253 (325)
+++.++.... ..|.+.+.++
T Consensus 262 ~v~~L~s~~~~itG~~ivdgg 282 (346)
T 3kvo_A 262 AAYSIFQKPKSFTGNFVIDEN 282 (346)
T ss_dssp HHHHHHTSCTTCCSCEEEHHH
T ss_pred HHHHHHhcCCCCCceEEECCc
Confidence 9999998733 4554434443
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.74 E-value=2.7e-17 Score=138.71 Aligned_cols=203 Identities=16% Similarity=0.084 Sum_probs=137.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----------CCccccCceeecCCchhHhhhC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~d~~~~~~~~~ 85 (325)
....++++||||+|.||++++++|+++|++|++++|+.++....... ........+|+.|.+++.++++
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 34457899999999999999999999999999999987653322111 0111234689999988877664
Q ss_pred -------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCce
Q 020476 86 -------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 86 -------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
++|++|||||.... .....+.++..+++|+.++..+.+++... ..+.+++|++||... +....
T Consensus 83 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~--~~~~~--- 157 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAPPPS--LNPAW--- 157 (274)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCCCCC--CCHHH---
T ss_pred HHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECChHh--cCCCC---
Confidence 78999999997533 23456678889999999998888876431 145578999999865 32100
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+....| .+|...+.....+..+ .|+++..++||.+..... . ...... ....+...+
T Consensus 158 ----~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~------~---~~~~~~------~~~~~~~pe 218 (274)
T 3e03_A 158 ----WGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDA------I---NMLPGV------DAAACRRPE 218 (274)
T ss_dssp ----HHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CC------CGGGSBCTH
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccch------h---hhcccc------cccccCCHH
Confidence 0123457 6777666655554443 489999999995443321 0 001111 112267899
Q ss_pred HHHHHHHHHHcCCC
Q 020476 230 DIVNLIYEALSNPS 243 (325)
Q Consensus 230 D~a~a~~~~~~~~~ 243 (325)
|+|++++.++....
T Consensus 219 dvA~~v~~l~s~~~ 232 (274)
T 3e03_A 219 IMADAAHAVLTREA 232 (274)
T ss_dssp HHHHHHHHHHTSCC
T ss_pred HHHHHHHHHhCccc
Confidence 99999999997654
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.74 E-value=5.8e-17 Score=133.73 Aligned_cols=220 Identities=15% Similarity=0.090 Sum_probs=146.9
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
....|+++||||++.||+++++.|++.|.+|++.+|+.+..+... ..........+|+.|+++++++++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 345679999999999999999999999999999999876543221 111122245689999998877664
Q ss_pred CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 ~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|.+||.... .+ .+
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~-~~----------~~ 152 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI-RG----------GF 152 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT-CS----------SS
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc-CC----------CC
Confidence 68999999996422 34567889999999999976665554321 0456799999998651 11 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cc--cch-HHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-AL--AKM-IPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~--~~~-~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
....| .+|.....+...+..+ .|+++..+.||.|-.+... .. ... ..... ....+.+ -+...+|+
T Consensus 153 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~-~~~~~~~------R~g~pedi 225 (254)
T 4fn4_A 153 AGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLT-KLMSLSS------RLAEPEDI 225 (254)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHH-HHHTTCC------CCBCHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHH-hcCCCCC------CCcCHHHH
Confidence 34467 6676655555444443 4899999999999776321 11 111 11111 0001111 25678999
Q ss_pred HHHHHHHHcCCC---CCceEEeeCCC
Q 020476 232 VNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
|.+++.++.+.. .+.++.+.+|-
T Consensus 226 A~~v~fLaSd~a~~iTG~~i~VDGG~ 251 (254)
T 4fn4_A 226 ANVIVFLASDEASFVNGDAVVVDGGL 251 (254)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCchhcCCcCCEEEeCCCc
Confidence 999999997543 34478777774
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=2.9e-18 Score=145.14 Aligned_cols=221 Identities=14% Similarity=0.047 Sum_probs=144.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|.+++.++++ ++|+
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~ 82 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDT 82 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4457899999999999999999999999999999987554332111 1111244679999887776654 6899
Q ss_pred EEECCCCCCCC--------CCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 90 VVNLAGTPIGT--------RWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 90 vi~~a~~~~~~--------~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|||||..... +...+.++..+++|+.++..+++++.... ...+++|++||... +.. .+.
T Consensus 83 lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~--~~~---------~~~ 151 (281)
T 3zv4_A 83 LIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAG--FYP---------NGG 151 (281)
T ss_dssp EECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGG--TSS---------SSS
T ss_pred EEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchh--ccC---------CCC
Confidence 99999974221 11123467788999999988888764320 12368999999876 321 122
Q ss_pred CCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCcccc-h----H---HHH-HHHcCCCCCCCcceeeeccH
Q 020476 161 GNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGALAK-M----I---PLF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~-~----~---~~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
...| .+|...+.....+..+. .+++..+.||.+..+....... . . +.. ......|+ ..+...
T Consensus 152 ~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~------~r~~~p 225 (281)
T 3zv4_A 152 GPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPI------GRMPAL 225 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTT------SSCCCG
T ss_pred CchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCC------CCCCCH
Confidence 3457 77877776666555432 4999999999998763211100 0 0 000 11112222 236788
Q ss_pred HHHHHHHHHHHcCCC----CCceEEeeCCCC
Q 020476 229 DDIVNLIYEALSNPS----YRGVINGTAPNP 255 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~----~~~~~~~~~~~~ 255 (325)
+|+|.+++.++..+. .+.++++.+|..
T Consensus 226 edvA~~v~fL~s~~~~~~itG~~i~vdGG~~ 256 (281)
T 3zv4_A 226 EEYTGAYVFFATRGDSLPATGALLNYDGGMG 256 (281)
T ss_dssp GGGSHHHHHHHSTTTSTTCSSCEEEESSSGG
T ss_pred HHHHHHHHHhhcccccccccCcEEEECCCCc
Confidence 999999999998333 344888888753
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.74 E-value=3.8e-18 Score=141.83 Aligned_cols=196 Identities=13% Similarity=0.084 Sum_probs=133.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC-CccccCceee--cCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK-KTRFFPGVMI--AEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~-~~~~~~~~d~--~d~~~~~~~~~------ 85 (325)
..++++||||+|+||++++++|+++|++|++++|+.++...... .. .......+|+ .|.+++.++++
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~~ 92 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHEF 92 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHhC
Confidence 34689999999999999999999999999999998655332211 00 0011223444 67776665553
Q ss_pred -CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|+||||||.... .....+.+...+++|+.++..+++++ ++ .+.+++|++||... +..
T Consensus 93 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~--~~~~~iv~isS~~~--~~~-------- 160 (247)
T 3i1j_A 93 GRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKR--SEDASIAFTSSSVG--RKG-------- 160 (247)
T ss_dssp SCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTT--SSSEEEEEECCGGG--TSC--------
T ss_pred CCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHh--CCCCeEEEEcchhh--cCC--------
Confidence 79999999997422 23456778889999999999988887 44 45678999999765 221
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
.+....| .+|...+.....+..+ .++++..++||.+..+. ... ... ......+...+|+
T Consensus 161 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~-------~~~--~~~------~~~~~~~~~p~dv 224 (247)
T 3i1j_A 161 -RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGM-------RAQ--AYP------DENPLNNPAPEDI 224 (247)
T ss_dssp -CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHH-------HHH--HST------TSCGGGSCCGGGG
T ss_pred -CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCcc-------chh--ccc------ccCccCCCCHHHH
Confidence 1234467 6777666655554443 58999999999876531 110 000 1111235678999
Q ss_pred HHHHHHHHcCC
Q 020476 232 VNLIYEALSNP 242 (325)
Q Consensus 232 a~a~~~~~~~~ 242 (325)
|++++.++...
T Consensus 225 a~~~~~l~s~~ 235 (247)
T 3i1j_A 225 MPVYLYLMGPD 235 (247)
T ss_dssp THHHHHHHSGG
T ss_pred HHHHHHHhCch
Confidence 99999998653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.73 E-value=3.2e-17 Score=137.92 Aligned_cols=218 Identities=13% Similarity=0.003 Sum_probs=144.5
Q ss_pred CCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCCCcc-cccCCC-CCccccCceeecCCchhHhhhC----------
Q 020476 20 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG-KKTRFFPGVMIAEEPQWRDCIQ---------- 85 (325)
Q Consensus 20 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~d~~d~~~~~~~~~---------- 85 (325)
.++++|||| +|+||+++++.|+++|++|++++|+.++. ...... .....+..+|+.|++++.++++
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~~ 86 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGN 86 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 468999999 99999999999999999999999987542 221111 1111245689999988877765
Q ss_pred CCCEEEECCCCCCC--------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 GSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 ~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++|||||.... .....+.+...+++|+.++..+++++.......+++|++||... ++.
T Consensus 87 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~iss~~~--~~~--------- 155 (269)
T 2h7i_A 87 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMDFDPS--RAM--------- 155 (269)
T ss_dssp CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECCCS--SCC---------
T ss_pred CceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEcCccc--ccc---------
Confidence 78999999997531 23456678889999999999999998752112258999998654 321
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc------ccchHH----HH-HHHcCCCCCCCcce
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA------LAKMIP----LF-MMFAGGPLGSGQQW 222 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~------~~~~~~----~~-~~~~~~~~~~~~~~ 222 (325)
+....| .+|...+.....+..+ .++++..++||.+..+.... ...... .. ......|++
T Consensus 156 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~----- 229 (269)
T 2h7i_A 156 -PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG----- 229 (269)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC-----
T ss_pred -CchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHhhhccCCcc-----
Confidence 223456 6777666555554443 48999999999887542100 000000 00 011111221
Q ss_pred eeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 223 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.+...+|+|++++.++.... ..| ++++.+|.
T Consensus 230 rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 264 (269)
T 2h7i_A 230 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGA 264 (269)
T ss_dssp CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTG
T ss_pred cCCCCHHHHHHHHHHHhCchhccCcceEEEecCCe
Confidence 126678999999999997643 344 77777764
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.73 E-value=5.2e-17 Score=132.81 Aligned_cols=220 Identities=16% Similarity=0.111 Sum_probs=147.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
...++++||||++.||+++++.|++.|.+|++.+|+.... ..............+|+.|++.++++++ ++|++|||
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVNN 86 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVNN 86 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEEC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 3457899999999999999999999999999999986431 1111122222245689999998888775 69999999
Q ss_pred CCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 94 AGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 94 a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||.... .+.+.++++..+++|+.++..+.+++... .....++|.+||... ... .+....| .+
T Consensus 87 AGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~--~~g---------~~~~~~Y~as 155 (247)
T 4hp8_A 87 AGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLS--FQG---------GIRVPSYTAA 155 (247)
T ss_dssp CCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CSSCHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhh--CCC---------CCCChHHHHH
Confidence 997533 45567889999999999987777654321 023468999999865 211 1234467 66
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|.....+......+ .|+++..+.||.|..+.......-.... ......|++ -+-..+|+|.+++.++.+.
T Consensus 156 Kaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~fLaSd~ 229 (247)
T 4hp8_A 156 KHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAG------RWGHSEDIAGAAVFLSSAA 229 (247)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTS------SCBCTHHHHHHHHHHTSGG
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCC------CCcCHHHHHHHHHHHhCch
Confidence 76555555444443 4899999999999765321110000111 222333432 2567899999999998754
Q ss_pred C---CCceEEeeCCC
Q 020476 243 S---YRGVINGTAPN 254 (325)
Q Consensus 243 ~---~~~~~~~~~~~ 254 (325)
. .+.++.+.+|.
T Consensus 230 a~~iTG~~i~VDGG~ 244 (247)
T 4hp8_A 230 ADYVHGAILNVDGGW 244 (247)
T ss_dssp GTTCCSCEEEESTTG
T ss_pred hcCCcCCeEEECccc
Confidence 3 34477777663
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.73 E-value=3.8e-17 Score=148.14 Aligned_cols=218 Identities=15% Similarity=0.130 Sum_probs=148.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCccc---c----cCCCCCccccCceeecCCchhHhhhCCC----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAE---L----IFPGKKTRFFPGVMIAEEPQWRDCIQGS---- 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~---~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~---- 87 (325)
.+++|||||+|+||.+++++|+++|++ |++++|+..... . +........+..+|+.|.+++.++++++
T Consensus 226 ~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~i~~~g 305 (486)
T 2fr1_A 226 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDV 305 (486)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999985 999999864221 1 1111111224568999999998888654
Q ss_pred --CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 88 --TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 88 --d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
|+|||+||.... ...+.+.....+++|+.++.++.++++. .+.++||++||.... +|.. ...
T Consensus 306 ~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~--~~~~~~V~~SS~a~~-~g~~----------g~~ 372 (486)
T 2fr1_A 306 PLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASA-FGAP----------GLG 372 (486)
T ss_dssp CEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TCCT----------TCT
T ss_pred CCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc--CCCCEEEEEcChHhc-CCCC----------CCH
Confidence 999999997533 2345667788889999999999999988 677899999997652 4421 235
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.| .+|...+.....+. ..|+++++++||.+.+.+... ... . ..+ ......+++.+|+++++..++..
T Consensus 373 ~Yaaaka~l~~la~~~~-~~gi~v~~i~pG~~~~~gm~~--~~~--~-----~~~--~~~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 373 GYAPGNAYLDGLAQQRR-SDGLPATAVAWGTWAGSGMAE--GPV--A-----DRF--RRHGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp TTHHHHHHHHHHHHHHH-HTTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH-hcCCeEEEEECCeeCCCcccc--hhH--H-----HHH--HhcCCCCCCHHHHHHHHHHHHhC
Confidence 67 66666655544443 359999999999998764211 000 0 001 11235689999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~ 267 (325)
+.. . +.+. .+.|..+...+..
T Consensus 441 ~~~-~-~~v~---~~d~~~~~~~~~~ 461 (486)
T 2fr1_A 441 AEV-C-PIVI---DVRWDRFLLAYTA 461 (486)
T ss_dssp TCS-S-CEEC---EECHHHHHHHHTS
T ss_pred CCC-e-EEEE---eCCHHHHhhhhcc
Confidence 652 2 2222 2567777665443
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.4e-17 Score=138.71 Aligned_cols=218 Identities=15% Similarity=0.056 Sum_probs=148.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.|.++||||++.||+++++.|++.|.+|++.+|+.+........ ........+|+.|+++++++++ ++|++|
T Consensus 29 gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 108 (273)
T 4fgs_A 29 AKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVLF 108 (273)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46899999999999999999999999999999987654332211 1111245689999988877654 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHH
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAE 167 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k 167 (325)
||||.... .+.+.+.++..+++|+.++..+.+++.......+++|++||.... .+ .+....| .+|
T Consensus 109 NNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~-~~----------~~~~~~Y~asK 177 (273)
T 4fgs_A 109 VNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS-TG----------TPAFSVYAASK 177 (273)
T ss_dssp ECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG-SC----------CTTCHHHHHHH
T ss_pred ECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc-cC----------CCCchHHHHHH
Confidence 99997533 455678899999999999999988887653344689999987651 11 1234467 677
Q ss_pred HHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc--ch---HHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 168 VCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--KM---IPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 168 ~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~--~~---~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.....+...+..+ .|+++..+.||.+..+.-.... .- -... ......|++ -+...+|+|.+++.+
T Consensus 178 aav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g~peeiA~~v~FL 251 (273)
T 4fgs_A 178 AALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMG------RVGRAEEVAAAALFL 251 (273)
T ss_dssp HHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTS------SCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHHH
Confidence 6666555555443 4899999999998776321110 00 0011 122223332 266789999999999
Q ss_pred HcCCC---CCceEEeeCCC
Q 020476 239 LSNPS---YRGVINGTAPN 254 (325)
Q Consensus 239 ~~~~~---~~~~~~~~~~~ 254 (325)
+.+.. .+.++.+.+|.
T Consensus 252 aSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 252 ASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HSGGGTTCCSCEEEESTTT
T ss_pred hCchhcCccCCeEeECcCh
Confidence 97543 34477777764
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.72 E-value=1.8e-17 Score=136.84 Aligned_cols=217 Identities=12% Similarity=0.064 Sum_probs=146.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||++.||+++++.|+++|.+|++.+|+.+...+. ...........+|+.|+++++++++ ++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 457899999999999999999999999999999986543221 1111122355789999998876654 68
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|.+||... ... .+..
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~--~~~---------~~~~ 156 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTS--QAA---------RPTV 156 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSB---------CTTC
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhh--cCC---------CCCc
Confidence 999999997643 44567889999999999987776654221 034578999999875 221 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc---cchHHHHHHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL---AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
..| .+|.....+......+ .|+++..+.||.|..+..... ..+.. ......|++ -+...+|+|.+
T Consensus 157 ~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~--~~~~~~Pl~------R~g~pediA~~ 228 (255)
T 4g81_D 157 APYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDS--WVKSSTPSQ------RWGRPEELIGT 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHH--HHHHHSTTC------SCBCGGGGHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHH--HHHhCCCCC------CCcCHHHHHHH
Confidence 457 6676655555444443 489999999999976631110 01111 112222332 25678999999
Q ss_pred HHHHHcCCC---CCceEEeeCCC
Q 020476 235 IYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 235 ~~~~~~~~~---~~~~~~~~~~~ 254 (325)
++.++.+.. .+.++.+.+|.
T Consensus 229 v~fL~S~~a~~iTG~~i~VDGG~ 251 (255)
T 4g81_D 229 AIFLSSKASDYINGQIIYVDGGW 251 (255)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhCCCcCCEEEECCCe
Confidence 999986543 34477777763
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.72 E-value=4.7e-16 Score=129.33 Aligned_cols=212 Identities=16% Similarity=0.093 Sum_probs=141.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..|+++||||++.||+++++.|+++|++|++.+|+...... .. ....+|+.|++++.++++ ++|++|
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~--~~----~~~~~Dv~~~~~v~~~~~~~~~~~G~iDilV 83 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEGLP--EE----LFVEADLTTKEGCAIVAEATRQRLGGVDVIV 83 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTTSC--TT----TEEECCTTSHHHHHHHHHHHHHHTSSCSEEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhCCC--cE----EEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 34689999999999999999999999999999997643211 11 145689999888776653 689999
Q ss_pred ECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 92 NLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 92 ~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
||||.... .+.+.+.++..+++|+.++..+.++ +++ .+..++|++||.... .+.. ....
T Consensus 84 nnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~--~~~G~Iv~isS~~~~-~~~~---------~~~~ 151 (261)
T 4h15_A 84 HMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVA--RGSGVVVHVTSIQRV-LPLP---------ESTT 151 (261)
T ss_dssp ECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGGT-SCCT---------TTCH
T ss_pred ECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhh--cCCceEEEEEehhhc-cCCC---------CccH
Confidence 99986422 3456778899999999987766554 444 456789999997651 1110 0123
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc------------cchHHHH-HHHcCCCCCCCcceeee
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL------------AKMIPLF-MMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~------------~~~~~~~-~~~~~~~~~~~~~~~~~ 225 (325)
.| .+|............+ .|+++..+.||.|-.+..... ....... ......|++ -+
T Consensus 152 ~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~ 225 (261)
T 4h15_A 152 AYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGGIPLG------RP 225 (261)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCCTTS------SC
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcCCCCC------CC
Confidence 45 5676665555444443 489999999999876521000 0000001 111122222 26
Q ss_pred ccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 226 IHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
...+|+|++++.++.... .+.++.+.+|-
T Consensus 226 g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 226 AKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred cCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 789999999999986543 34488887774
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.72 E-value=5.5e-17 Score=139.43 Aligned_cols=211 Identities=14% Similarity=0.116 Sum_probs=139.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC-CccccCceeecCC-chhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK-KTRFFPGVMIAEE-PQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~-~~~~~~~~d~~d~-~~~~~~~~-------~ 86 (325)
.++|+||||+|+||.+++++|+++|++|++++|+.++..... ... ....+..+|+.|. +.+.++++ +
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~ 91 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGK 91 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCC
Confidence 468999999999999999999999999999999875432211 110 1112446899998 76655543 7
Q ss_pred CCEEEECCCCCCC---------------------------------CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCC
Q 020476 87 STAVVNLAGTPIG---------------------------------TRWSSEIKKEIKESRIRVTSKVVDLINES--PEG 131 (325)
Q Consensus 87 ~d~vi~~a~~~~~---------------------------------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~ 131 (325)
+|+||||||.... .....+.....+++|+.++..+++++... ..+
T Consensus 92 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~ 171 (311)
T 3o26_A 92 LDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSD 171 (311)
T ss_dssp CCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSS
T ss_pred CCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehHHHHHHHhhHhhccCC
Confidence 9999999997521 12245566778999999988877766321 045
Q ss_pred CCCEEEEeeeeeeeecCCCCc-------------------------------eecCCC--CCCCch-HHHHHHHHHHHHH
Q 020476 132 VRPSVLVSATALGYYGTSETE-------------------------------VFDESS--PSGNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 132 ~~~~v~~Ss~~v~~~g~~~~~-------------------------------~~~e~~--~~~~~y-~~k~~~~~~~~~~ 177 (325)
.+++|++||.... ++..... ...... +....| .+|...+.....+
T Consensus 172 ~~~IV~isS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~l 250 (311)
T 3o26_A 172 SPRIVNVSSSTGS-LKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAYTTSKACLNAYTRVL 250 (311)
T ss_dssp SCEEEEECCGGGS-GGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCcc-cccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhhHHHHHHHHHHHHHH
Confidence 6799999998652 2211100 000111 122357 7888777777666
Q ss_pred hhcC-CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCceEEeeCC
Q 020476 178 KVNK-DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAP 253 (325)
Q Consensus 178 ~~~~-~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~~~~~~~~ 253 (325)
..+. ++++..+.||+|..+.... ......++.++.++.++..+. ..+.|...++
T Consensus 251 a~e~~~i~v~~v~PG~v~T~~~~~----------------------~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~s~ 307 (311)
T 3o26_A 251 ANKIPKFQVNCVCPGLVKTEMNYG----------------------IGNYTAEEGAEHVVRIALFPDDGPSGFFYDCSE 307 (311)
T ss_dssp HHHCTTSEEEEECCCSBCSGGGTT----------------------CCSBCHHHHHHHHHHHHTCCSSCCCSCEETC--
T ss_pred HhhcCCceEEEecCCceecCCcCC----------------------CCCCCHHHHHHHHHHHHhCCCCCCCceEecccc
Confidence 6654 6999999999987652110 112578899999999887654 4456655443
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.72 E-value=2e-16 Score=143.95 Aligned_cols=219 Identities=17% Similarity=0.180 Sum_probs=150.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCccc---c----cCCCCCccccCceeecCCchhHhhhCC--CCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAE---L----IFPGKKTRFFPGVMIAEEPQWRDCIQG--STA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~---~----~~~~~~~~~~~~~d~~d~~~~~~~~~~--~d~ 89 (325)
.++||||||+|+||.+++++|+++|+ .|++++|+..... . +........+..+|+.|.+++.+++++ +|+
T Consensus 259 ~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~~~ld~ 338 (511)
T 2z5l_A 259 SGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGCEVVHAACDVAERDALAALVTAYPPNA 338 (511)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTCEEEEEECCSSCHHHHHHHHHHSCCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCCEEEEEEeCCCCHHHHHHHHhcCCCcE
Confidence 46899999999999999999999998 5999999764321 1 111111122456899999999998864 999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||+||.... .....+.....+++|+.++.++.+++... .+.++||++||.... +|.. ....| .
T Consensus 339 VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~-~~~~~~V~~SS~a~~-~g~~----------g~~~Yaa 406 (511)
T 2z5l_A 339 VFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADI-KGLDAFVLFSSVTGT-WGNA----------GQGAYAA 406 (511)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSC-TTCCCEEEEEEGGGT-TCCT----------TBHHHHH
T ss_pred EEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCEEEEEeCHHhc-CCCC----------CCHHHHH
Confidence 9999997533 23455677888999999999999998872 167899999997542 4421 23467 6
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCC
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~ 245 (325)
+|...+.....+. ..|+++++++||.+.+.+.... .....+. .....+++.+|+++++..++..+..
T Consensus 407 aKa~ld~la~~~~-~~gi~v~sv~pG~~~~tgm~~~-~~~~~~~----------~~g~~~l~~e~~a~~l~~al~~~~~- 473 (511)
T 2z5l_A 407 ANAALDALAERRR-AAGLPATSVAWGLWGGGGMAAG-AGEESLS----------RRGLRAMDPDAAVDALLGAMGRNDV- 473 (511)
T ss_dssp HHHHHHHHHHHHH-TTTCCCEEEEECCBCSTTCCCC-HHHHHHH----------HHTBCCBCHHHHHHHHHHHHHHTCS-
T ss_pred HHHHHHHHHHHHH-HcCCcEEEEECCcccCCccccc-ccHHHHH----------hcCCCCCCHHHHHHHHHHHHhCCCC-
Confidence 7776666665543 4599999999998843321111 0011111 1123578999999999999987642
Q ss_pred ceEEeeCCCCCCHHHHHHHHHH
Q 020476 246 GVINGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 246 ~~~~~~~~~~~s~~e~~~~i~~ 267 (325)
.+.+. .+.|..+...+..
T Consensus 474 -~v~v~---~~d~~~~~~~~~~ 491 (511)
T 2z5l_A 474 -CVTVV---DVDWERFAPATNA 491 (511)
T ss_dssp -EEEEC---CBCHHHHHHHHHH
T ss_pred -EEEEE---eCCHHHHHhhhcc
Confidence 23233 3567777766544
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.6e-17 Score=140.69 Aligned_cols=208 Identities=16% Similarity=0.117 Sum_probs=137.1
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC---------CCcccccCCCC-CccccCceeecCCchhHhhh-
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS---------RSKAELIFPGK-KTRFFPGVMIAEEPQWRDCI- 84 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~---------~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~- 84 (325)
|....++++||||+|+||+++++.|+++|++|++.+|. ..+........ .......+|+.+.+.+.+++
T Consensus 5 ~~l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~ 84 (319)
T 1gz6_A 5 LRFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVK 84 (319)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHH
T ss_pred CCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHH
Confidence 33445789999999999999999999999999998653 22211110000 00001236888887665543
Q ss_pred ------CCCCEEEECCCCCCCC---CCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCC
Q 020476 85 ------QGSTAVVNLAGTPIGT---RWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSET 151 (325)
Q Consensus 85 ------~~~d~vi~~a~~~~~~---~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~ 151 (325)
.++|+||||||..... ....+.++..+++|+.++.++++++ ++ .+.+++|++||.... ++.
T Consensus 85 ~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~--~~~grIV~vsS~~~~-~~~--- 158 (319)
T 1gz6_A 85 TALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKK--QNYGRIIMTASASGI-YGN--- 158 (319)
T ss_dssp HHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCEEEEEECCHHHH-HCC---
T ss_pred HHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH--cCCCEEEEECChhhc-cCC---
Confidence 3699999999975332 3456778889999999988887776 43 355799999997542 442
Q ss_pred ceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeecc
Q 020476 152 EVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 152 ~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
+....| .+|...+.....+..+ .|++++.++||.+ .+.. ....+ .....+++
T Consensus 159 -------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~---~~~~~-------------~~~~~~~~ 214 (319)
T 1gz6_A 159 -------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMT---ETVMP-------------EDLVEALK 214 (319)
T ss_dssp -------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTT---GGGSC-------------HHHHHHSC
T ss_pred -------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-cccc---cccCC-------------hhhhccCC
Confidence 123467 7777766665555443 4899999999986 3211 11000 01123568
Q ss_pred HHHHHHHHHHHHcCCC--CCceEEeeCC
Q 020476 228 LDDIVNLIYEALSNPS--YRGVINGTAP 253 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~--~~~~~~~~~~ 253 (325)
.+|+|.+++.++..+. .+..|++.++
T Consensus 215 p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 215 PEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp GGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 8999999999987643 3447777665
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=3.9e-16 Score=133.23 Aligned_cols=218 Identities=11% Similarity=0.007 Sum_probs=139.0
Q ss_pred cCCeEEEECCC--chHHHHHHHHHHhCCCeEEEEecCC-----------CcccccCCC--CC---cccc-----------
Q 020476 19 SQMTVSVTGAT--GFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELIFPG--KK---TRFF----------- 69 (325)
Q Consensus 19 ~~~~ilI~Gat--G~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~~~~--~~---~~~~----------- 69 (325)
..++++||||+ |+||+++++.|+++|++|++++|++ .+....... .. ....
T Consensus 7 ~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (297)
T 1d7o_A 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNPE 86 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSGG
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhhhhhhhhhHhhhhhhhccccccccccccccceeccchh
Confidence 34689999999 9999999999999999999998642 111111000 00 0000
Q ss_pred -CceeecC--------CchhHhhhC-------CCCEEEECCCCCC-----CCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 70 -PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 70 -~~~d~~d--------~~~~~~~~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
...|+.| .+++.++++ ++|++|||||... ......+.+...+++|+.++.++++++...
T Consensus 87 dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 166 (297)
T 1d7o_A 87 DVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPI 166 (297)
T ss_dssp GSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 1122222 555555443 6899999998531 134456778889999999999999998763
Q ss_pred CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC-Cch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCCccc
Q 020476 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGALA 202 (325)
Q Consensus 129 ~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~~~~ 202 (325)
....+++|++||... +.. .+.. ..| .+|...+.....+..+ .|++++.++||.+.++......
T Consensus 167 m~~~g~iv~isS~~~--~~~---------~~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~ 235 (297)
T 1d7o_A 167 MNPGGASISLTYIAS--ERI---------IPGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG 235 (297)
T ss_dssp EEEEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred hccCceEEEEecccc--ccC---------CCCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhcc
Confidence 112268999999765 221 1222 367 7787766665555443 5899999999999988533211
Q ss_pred chHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC---CCceEEeeCCC
Q 020476 203 KMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 203 ~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
..+.. ......|+ ..+.+.+|+|++++.++.... .+..+++.+|.
T Consensus 236 -~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 236 -FIDTMIEYSYNNAPI------QKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp -HHHHHHHHHHHHSSS------CCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred -ccHHHHHHhhccCCC------CCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 11111 11111222 135789999999999987532 33488888774
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.70 E-value=6e-16 Score=128.96 Aligned_cols=219 Identities=11% Similarity=0.005 Sum_probs=144.9
Q ss_pred cCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcccccCC---C--CCccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---G--KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~--~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..|+++||||+| -||.++++.|+++|.+|++.+|+++....... . ........+|+.|++++.++++
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 457899999987 89999999999999999999998755332211 0 1111244689999888776653
Q ss_pred -CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++|||||.... .+...+.+...+++|+.+...+..++........++|++||.... ++
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~-~~---------- 153 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE-FA---------- 153 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT-SC----------
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc-cC----------
Confidence 68999999996422 223345566778899999888888776643445789999997651 11
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
.+....| .+|.........+..+ .|+++..|.||.+..+........-... ......|++ -+...+|+|
T Consensus 154 ~~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~------R~g~peevA 227 (256)
T 4fs3_A 154 VQNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLK------RNVDQVEVG 227 (256)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTS------SCCCHHHHH
T ss_pred cccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCC------CCcCHHHHH
Confidence 1223457 6676655555444443 4899999999998775322111111111 122223332 256789999
Q ss_pred HHHHHHHcCCC---CCceEEeeCCC
Q 020476 233 NLIYEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~---~~~~~~~~~~~ 254 (325)
.+++.++.+.. .+.++.+.+|.
T Consensus 228 ~~v~fL~Sd~a~~iTG~~i~VDGG~ 252 (256)
T 4fs3_A 228 KTAAYLLSDLSSGVTGENIHVDSGF 252 (256)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhcCccCCEEEECcCH
Confidence 99999997543 33477777763
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.70 E-value=5.2e-17 Score=140.32 Aligned_cols=213 Identities=14% Similarity=0.071 Sum_probs=138.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----------CCCccccCceeecCCchhHhhhC-----
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----------GKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----------~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
++|+||||+|+||++++++|+++|++|+++.|+......... .........+|+.|.+++.++++
T Consensus 3 k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~g 82 (327)
T 1jtv_A 3 TVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEG 82 (327)
T ss_dssp EEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhhccCCCCceEEEEecCCCHHHHHHHHHHHhcC
Confidence 589999999999999999999999999998886544322110 00111244679999999888876
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|+||||||.... .....+.+...+++|+.++.++++++ ++ .+.+++|++||... +.. .
T Consensus 83 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~--~~~g~IV~isS~~~--~~~---------~ 149 (327)
T 1jtv_A 83 RVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR--RGSGRVLVTGSVGG--LMG---------L 149 (327)
T ss_dssp CCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEEEEGGG--TSC---------C
T ss_pred CCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--cCCCEEEEECCccc--ccC---------C
Confidence 38999999996432 23356678889999999999998875 33 35679999999876 321 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccch------------HHHHHHHcCCCCCCCcce
Q 020476 159 PSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKM------------IPLFMMFAGGPLGSGQQW 222 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 222 (325)
+....| .+|...+.....+.. ..++++++++||.|..+........ ...+...... ......
T Consensus 150 ~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 227 (327)
T 1jtv_A 150 PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAH--SKQVFR 227 (327)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHH--HHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHH--HHHhhh
Confidence 223467 778777766665555 3589999999999987642111000 0000000000 000000
Q ss_pred eeeccHHHHHHHHHHHHcCCCCCceE
Q 020476 223 FSWIHLDDIVNLIYEALSNPSYRGVI 248 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~~~~~~ 248 (325)
+-..+.+|+|++++.++..+.....|
T Consensus 228 ~~~~~pedvA~~i~~l~~~~~~~~~~ 253 (327)
T 1jtv_A 228 EAAQNPEEVAEVFLTALRAPKPTLRY 253 (327)
T ss_dssp HHCBCHHHHHHHHHHHHHCSSCCSEE
T ss_pred hcCCCHHHHHHHHHHHHcCCCCCeEE
Confidence 11258999999999999876544445
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=9.7e-17 Score=133.01 Aligned_cols=221 Identities=16% Similarity=0.098 Sum_probs=146.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc---CCCCCccccCceeecCCchhHhhhC-------CC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
...++++||||++.||+++++.|++.|.+|++.+|+.+..... ...........+|+.|++++.++++ ++
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~i 84 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRL 84 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3457899999999999999999999999999999987653221 1111112245689999988776653 68
Q ss_pred CEEEECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 88 TAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 88 d~vi~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|++|||||.... .+...+.++..+++|+.++..+.+++... ..+..++|.+||... ... .+....|
T Consensus 85 DiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~--~~~---------~~~~~~Y 153 (258)
T 4gkb_A 85 DGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA--VTG---------QGNTSGY 153 (258)
T ss_dssp CEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH--HHC---------CSSCHHH
T ss_pred CEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh--ccC---------CCCchHH
Confidence 999999997532 34467788999999999977776655321 013378999999875 221 1223457
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccc-h----HHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAK-M----IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
.+|.....+......+ +|+++..+.||.|..+....... . ..........|++ .-+...+|+|.++
T Consensus 154 ~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg-----~R~g~peeiA~~v 228 (258)
T 4gkb_A 154 CASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLG-----RRFTTPDEIADTA 228 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTT-----TSCBCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCC-----CCCcCHHHHHHHH
Confidence 6676665555544443 58999999999998764211100 0 0001122222332 1267789999999
Q ss_pred HHHHcCCC---CCceEEeeCCC
Q 020476 236 YEALSNPS---YRGVINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~ 254 (325)
+.++.... .+.++.+.+|.
T Consensus 229 ~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 229 VFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp HHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHhCchhcCccCCeEEECCCc
Confidence 99987543 34488888775
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=1.3e-17 Score=144.17 Aligned_cols=165 Identities=14% Similarity=0.135 Sum_probs=115.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCC--ccc----ccCCCCCccccCceeecCCchhHhhhCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRS--KAE----LIFPGKKTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~--~~~----~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
+|||+||||+||||++++..|+++|+ +|+++++.+. ... .+..... .+. .|+.+.+.+.+++++
T Consensus 4 ~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~--~~~-~di~~~~~~~~a~~~ 80 (327)
T 1y7t_A 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAF--PLL-AGLEATDDPKVAFKD 80 (327)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC--TTE-EEEEEESCHHHHTTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhcccc--ccc-CCeEeccChHHHhCC
Confidence 46999999999999999999999886 8999998642 111 1111000 022 477777778888999
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCC-CC-CEEEEeeeeeeeecCCCCceec-CC---CCC
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG-VR-PSVLVSATALGYYGTSETEVFD-ES---SPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~-~~-~~v~~Ss~~v~~~g~~~~~~~~-e~---~~~ 160 (325)
+|+|||+||.+.. ...++.++++.|+.++.++++++++ .+ .+ +++++|+.... . .+.. +. .++
T Consensus 81 ~D~Vih~Ag~~~~---~~~~~~~~~~~Nv~~t~~l~~a~~~--~~~~~~~vvv~snp~~~-~-----~~~~~~~~~~~~p 149 (327)
T 1y7t_A 81 ADYALLVGAAPRK---AGMERRDLLQVNGKIFTEQGRALAE--VAKKDVKVLVVGNPANT-N-----ALIAYKNAPGLNP 149 (327)
T ss_dssp CSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HSCTTCEEEECSSSHHH-H-----HHHHHHTCTTSCG
T ss_pred CCEEEECCCcCCC---CCCCHHHHHHHHHHHHHHHHHHHHh--hcCCCeEEEEeCCchhh-h-----HHHHHHHcCCCCh
Confidence 9999999997532 1345678899999999999999998 43 33 56665543210 0 0111 11 123
Q ss_pred CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCC
Q 020476 161 GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~ 198 (325)
...| .+|...+.....+.+..+++.+++|+++|||+.+
T Consensus 150 ~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 150 RNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred hheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 3346 6777777777777777799999999999999865
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=7.4e-17 Score=134.98 Aligned_cols=203 Identities=12% Similarity=0.010 Sum_probs=136.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHh---CCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.++++||||+|+||++++++|++ .|++|++++|+.+........ ........+|+.|++++.++++
T Consensus 6 ~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (259)
T 1oaa_A 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL 85 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred CcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHhc
Confidence 46899999999999999999999 899999999986543221110 0111244579999887776553
Q ss_pred ----CCC--EEEECCCCCCC-----CC-CChhhHHHHHHHhhHHHHHHHHHHhcCC--C--CCCCEEEEeeeeeeeecCC
Q 020476 86 ----GST--AVVNLAGTPIG-----TR-WSSEIKKEIKESRIRVTSKVVDLINESP--E--GVRPSVLVSATALGYYGTS 149 (325)
Q Consensus 86 ----~~d--~vi~~a~~~~~-----~~-~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~--~~~~~v~~Ss~~v~~~g~~ 149 (325)
++| ++|||||.... .+ ...+.+...+++|+.++.++++++.... . +.+++|++||... +..
T Consensus 86 ~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv~isS~~~--~~~- 162 (259)
T 1oaa_A 86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQP- 162 (259)
T ss_dssp CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TSC-
T ss_pred cccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEEEEcCchh--cCC-
Confidence 368 99999997422 11 3567788999999999999999886531 1 2357999999876 321
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhhcC-CceEEEEEeceEEcCCCCcc------cchHHHHHHHcCCCCCCCcc
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKVNK-DVRLALIRIGIVLGKDGGAL------AKMIPLFMMFAGGPLGSGQQ 221 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~-~~~~~ilRp~~i~g~~~~~~------~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+....| .+|...+.....+..+. ++++..++||.+-.+..... ......+ ....|
T Consensus 163 --------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~--~~~~p------ 226 (259)
T 1oaa_A 163 --------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKL--QKLKS------ 226 (259)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHH--HHHHH------
T ss_pred --------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHH--HHhhh------
Confidence 1234467 77877777766665543 58999999998754411000 0000000 00001
Q ss_pred eeeeccHHHHHHHHHHHHcC
Q 020476 222 WFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~ 241 (325)
...+.+.+|+|++++.++..
T Consensus 227 ~~~~~~p~dvA~~v~~l~~~ 246 (259)
T 1oaa_A 227 DGALVDCGTSAQKLLGLLQK 246 (259)
T ss_dssp TTCSBCHHHHHHHHHHHHHH
T ss_pred cCCcCCHHHHHHHHHHHHhh
Confidence 12368899999999999874
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.69 E-value=2.6e-16 Score=141.33 Aligned_cols=216 Identities=14% Similarity=0.061 Sum_probs=143.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc--ccCCCCCccccCceeecCCchhHhhhC-------C-CCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAEEPQWRDCIQ-------G-STA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~-~d~ 89 (325)
.++++||||+|.||.+++++|+++|.+|++++|+..... ...... ......+|+.|.+++.++++ + +|+
T Consensus 213 gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~-~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 213 GKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKV-GGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHH-TCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHc-CCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 468999999999999999999999999999998653211 110000 01145689999998887664 3 999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
||||||.... ...+.+.++..+++|+.++.++.+++.... .+..+||++||.... .+. +....|
T Consensus 292 lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~-~g~----------~g~~~Y 360 (454)
T 3u0b_A 292 LVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGI-AGN----------RGQTNY 360 (454)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHH-HCC----------TTCHHH
T ss_pred EEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhC-CCC----------CCCHHH
Confidence 9999997633 334667788999999999999999887621 256789999998752 221 224467
Q ss_pred -HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|...+.....+.. ..|++++.+.||.+..+........... ......++ ..+...+|+|+++..++.
T Consensus 361 aasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~-~~~~~~~l------~r~g~pedvA~~v~fL~s 433 (454)
T 3u0b_A 361 ATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATRE-VGRRLNSL------FQGGQPVDVAELIAYFAS 433 (454)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CH-HHHHSBTT------SSCBCHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHH-HHHhhccc------cCCCCHHHHHHHHHHHhC
Confidence 677655544444433 3589999999999987642211100000 00111111 224678999999999987
Q ss_pred CCC---CCceEEeeCCC
Q 020476 241 NPS---YRGVINGTAPN 254 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~ 254 (325)
... .+.++++.++.
T Consensus 434 ~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 434 PASNAVTGNTIRVCGQA 450 (454)
T ss_dssp GGGTTCCSCEEEESSSB
T ss_pred CccCCCCCcEEEECCcc
Confidence 533 34488887764
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.65 E-value=2.7e-16 Score=131.57 Aligned_cols=207 Identities=14% Similarity=0.013 Sum_probs=131.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC----CCccccCceeecCCchhHhhh--------CCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----KKTRFFPGVMIAEEPQWRDCI--------QGS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~----~~~~~~~~~d~~d~~~~~~~~--------~~~ 87 (325)
.++++||||+|+||+++++.|+++|++|++++|+.+........ ........+|+.|++++.+++ .++
T Consensus 5 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~i 84 (260)
T 2qq5_A 5 GQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGRL 84 (260)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCc
Confidence 46899999999999999999999999999999986543221110 001124457898888776654 357
Q ss_pred CEEEECCCC--C--------CCCCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCce
Q 020476 88 TAVVNLAGT--P--------IGTRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 88 d~vi~~a~~--~--------~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
|++|||||. . .......+.+...+++|+.++..+.+++ ++ .+.+++|++||... +..
T Consensus 85 d~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~~g~iv~isS~~~--~~~----- 155 (260)
T 2qq5_A 85 DVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVP--AGQGLIVVISSPGS--LQY----- 155 (260)
T ss_dssp CEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGG--GTCCEEEEECCGGG--TSC-----
T ss_pred eEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhh--cCCcEEEEEcChhh--cCC-----
Confidence 999999952 1 1123445667888999998886665544 34 45679999999876 321
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCC-CcceeeeccH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS-GQQWFSWIHL 228 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v 228 (325)
++...| .+|...+.....+.. ..++++++++||.+..+..... .............. ..........
T Consensus 156 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~p 227 (260)
T 2qq5_A 156 -----MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEH---MAKEEVLQDPVLKQFKSAFSSAETT 227 (260)
T ss_dssp -----CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC-------------------------CHHHHH
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHh---hccccccchhHHHHHHhhhccCCCH
Confidence 123457 678777766655543 3589999999999987642111 00000000000000 0001124678
Q ss_pred HHHHHHHHHHHcCCC
Q 020476 229 DDIVNLIYEALSNPS 243 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~ 243 (325)
+|+|++++.++..+.
T Consensus 228 e~va~~v~~l~s~~~ 242 (260)
T 2qq5_A 228 ELSGKCVVALATDPN 242 (260)
T ss_dssp HHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHhcCcc
Confidence 999999999997753
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.64 E-value=3.4e-15 Score=134.89 Aligned_cols=200 Identities=16% Similarity=0.128 Sum_probs=140.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccc---c----CCCCCccccCceeecCCchhHhhhC------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL---I----FPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~---~----~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
.+++|||||+|.||.+++++|+++|. .|++++|+...... . ........+..+|+.|.+++.++++
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~g~~v~~~~~Dvtd~~~v~~~~~~i~~~g 318 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQLGVRVTIAACDAADREALAALLAELPEDA 318 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTCCTTS
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHhC
Confidence 36899999999999999999999998 78888886433211 1 1111112245689999999888775
Q ss_pred CCCEEEECCCCC-CC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 GSTAVVNLAGTP-IG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 ~~d~vi~~a~~~-~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
.+|+|||+||.. .. .....+.....+++|+.++.++.+++.. ....+||++||.... +|. +..
T Consensus 319 ~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~--~~~~~iV~~SS~a~~-~g~----------~g~ 385 (496)
T 3mje_A 319 PLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD--LDLDAFVLFSSGAAV-WGS----------GGQ 385 (496)
T ss_dssp CEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TTC----------TTC
T ss_pred CCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEEEeChHhc-CCC----------CCc
Confidence 479999999975 22 3445667888999999999999999998 677899999997652 332 224
Q ss_pred Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 162 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
..| .+|...+.....+. ..|++++.+.||.+.+.+..........+. ......+..++.+.++..++.
T Consensus 386 ~~YaAaKa~ldala~~~~-~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~----------~~g~~~l~pe~~~~~l~~~l~ 454 (496)
T 3mje_A 386 PGYAAANAYLDALAEHRR-SLGLTASSVAWGTWGEVGMATDPEVHDRLV----------RQGVLAMEPEHALGALDQMLE 454 (496)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCCEEEEECEESSSCC------CHHHH----------HTTEEEECHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCeEEEEECCcccCCccccChHHHHHHH----------hcCCCCCCHHHHHHHHHHHHc
Confidence 467 66766666655444 359999999999987765321111111111 011346788999999999998
Q ss_pred CCC
Q 020476 241 NPS 243 (325)
Q Consensus 241 ~~~ 243 (325)
.+.
T Consensus 455 ~~~ 457 (496)
T 3mje_A 455 NDD 457 (496)
T ss_dssp HTC
T ss_pred CCC
Confidence 765
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-14 Score=122.85 Aligned_cols=219 Identities=14% Similarity=0.038 Sum_probs=135.5
Q ss_pred cCCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCC-----------Ccc---cccCCCCC--cccc-----------
Q 020476 19 SQMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKA---ELIFPGKK--TRFF----------- 69 (325)
Q Consensus 19 ~~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~---~~~~~~~~--~~~~----------- 69 (325)
..++++|||| +|.||.++++.|+++|++|++++|++ ... ........ ....
T Consensus 8 ~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 87 (315)
T 2o2s_A 8 RGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKLPDGSLIEFAGVYPLDAAFDKPE 87 (315)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBCTTSCBCCCSCEEECCTTCSSTT
T ss_pred CCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhhhccccccccccccccccccccc
Confidence 3468999999 89999999999999999999998743 110 01100000 0001
Q ss_pred -CceeecC--------CchhHhhhC-------CCCEEEECCCCCC-----CCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 70 -PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 70 -~~~d~~d--------~~~~~~~~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
..+|+.| .+++.++++ ++|++|||||... ..+...+.+...+++|+.++..+++++...
T Consensus 88 ~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 167 (315)
T 2o2s_A 88 DVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPI 167 (315)
T ss_dssp SSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTT
T ss_pred hhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 1233443 455555443 6899999998542 134456778899999999999999998763
Q ss_pred CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC-Cch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCC---
Q 020476 129 PEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGG--- 199 (325)
Q Consensus 129 ~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~--- 199 (325)
....+++|++||... +... +.. ..| .+|...+.....+..+ .|+++..++||.|..+...
T Consensus 168 m~~~g~Iv~isS~~~--~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~ 236 (315)
T 2o2s_A 168 MNEGGSAVTLSYLAA--ERVV---------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAASAIG 236 (315)
T ss_dssp EEEEEEEEEEEEGGG--TSCC---------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHHHTT
T ss_pred HhcCCEEEEEecccc--cccC---------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhhhcc
Confidence 111268999999865 2211 122 357 6777666555444332 5899999999998754200
Q ss_pred --cccchHHHH-H-HHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 200 --ALAKMIPLF-M-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 200 --~~~~~~~~~-~-~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
....+.... . .....|+ ..+...+|+|++++.++.... ..| .+.+.+|.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~p~------~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 237 KSGEKSFIDYAIDYSYNNAPL------RRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp CSSSSCHHHHHHHHHHHHSSS------CCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred ccccchhHHHHHHHHhccCCC------CCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 000111111 0 0111122 125789999999999987532 344 77777664
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.60 E-value=8.4e-15 Score=126.20 Aligned_cols=224 Identities=14% Similarity=0.003 Sum_probs=121.9
Q ss_pred CCeEEEECC--CchHHHHHHHHHHhCCCeEEEEecCC-----------Cccccc-----------CCCCCc-------cc
Q 020476 20 QMTVSVTGA--TGFIGRRLVQRLQADNHQVRVLTRSR-----------SKAELI-----------FPGKKT-------RF 68 (325)
Q Consensus 20 ~~~ilI~Ga--tG~iG~~l~~~L~~~g~~V~~~~r~~-----------~~~~~~-----------~~~~~~-------~~ 68 (325)
.++++|||| +|.||+++++.|+++|++|++++|++ ...... ...... ..
T Consensus 9 ~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (319)
T 2ptg_A 9 GKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEKPVDLVFDK 88 (319)
T ss_dssp TCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC--------------------------------CCSE
T ss_pred CCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhccccccccc
Confidence 468999999 89999999999999999999998642 111100 000000 00
Q ss_pred c------------CceeecC--------CchhHhhhC-------CCCEEEECCCCCC-----CCCCChhhHHHHHHHhhH
Q 020476 69 F------------PGVMIAE--------EPQWRDCIQ-------GSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIR 116 (325)
Q Consensus 69 ~------------~~~d~~d--------~~~~~~~~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~ 116 (325)
. ..+|+.| .+++.++++ ++|++|||||... ......+.+...+++|+.
T Consensus 89 ~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~ 168 (319)
T 2ptg_A 89 IYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSY 168 (319)
T ss_dssp EEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTH
T ss_pred cccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhH
Confidence 1 1223333 345554443 6899999998531 134456778889999999
Q ss_pred HHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC-Cch-HHHHHHHHHHHHHhhc----CCceEEEEEe
Q 020476 117 VTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRI 190 (325)
Q Consensus 117 ~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp 190 (325)
++..+++++.......+++|++||... +... +.. ..| .+|...+.....+..+ .|++++.++|
T Consensus 169 g~~~l~~~~~~~m~~~g~Iv~isS~~~--~~~~---------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~P 237 (319)
T 2ptg_A 169 SFVSLLQHFLPLMKEGGSALALSYIAS--EKVI---------PGYGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISA 237 (319)
T ss_dssp HHHHHHHHHGGGEEEEEEEEEEEECC-----------------------------THHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred HHHHHHHHHHHHHhcCceEEEEecccc--cccc---------CccchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEee
Confidence 999999988763111268999999865 2211 112 346 5665554444433322 4899999999
Q ss_pred ceEEcCCCCcccc-hHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 191 GIVLGKDGGALAK-MIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 191 ~~i~g~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
|.|..+....... ....+ .... ..+........+...+|+|++++.++.... ..| ++.+.+|..
T Consensus 238 G~v~T~~~~~~~~~~~~~~~~~~~-~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~~ 306 (319)
T 2ptg_A 238 GPLKSRAASAIGKAGDKTFIDLAI-DYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGLH 306 (319)
T ss_dssp CCCC--------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTCT
T ss_pred CCccChhhhhcccccchhhHHHHH-HHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCce
Confidence 9987763211100 00000 0000 000001111236789999999999997532 344 777777753
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.58 E-value=1.9e-14 Score=131.51 Aligned_cols=220 Identities=14% Similarity=0.035 Sum_probs=143.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEE-ecCCCc-------------ccccC----CCCCccccCceeecCCchh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVL-TRSRSK-------------AELIF----PGKKTRFFPGVMIAEEPQW 80 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~-~r~~~~-------------~~~~~----~~~~~~~~~~~d~~d~~~~ 80 (325)
.+++|||||+|.||.+++++|+++|.+ |+++ +|+... ..... .......+..+|+.|.+++
T Consensus 251 ~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvtd~~~v 330 (525)
T 3qp9_A 251 DGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGATATVVTCDLTDAEAA 330 (525)
T ss_dssp TSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTCEEEEEECCTTSHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCCEEEEEECCCCCHHHH
Confidence 358999999999999999999999987 5666 787432 11110 0011122456899999998
Q ss_pred HhhhC------CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCC--C-CCCEEEEeeeeeeeecC
Q 020476 81 RDCIQ------GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPE--G-VRPSVLVSATALGYYGT 148 (325)
Q Consensus 81 ~~~~~------~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~-~~~~v~~Ss~~v~~~g~ 148 (325)
.++++ .+|+||||||.... ...+.+.....+++|+.++.++.+++..... + ..+||++||.... +|.
T Consensus 331 ~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~~iV~~SS~a~~-~g~ 409 (525)
T 3qp9_A 331 ARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPPVLVLFSSVAAI-WGG 409 (525)
T ss_dssp HHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCCEEEEEEEGGGT-TCC
T ss_pred HHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCCEEEEECCHHHc-CCC
Confidence 88875 36999999997533 3445667888999999999999999887311 1 6789999998752 331
Q ss_pred CCCceecCCCCCCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeecc
Q 020476 149 SETEVFDESSPSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 149 ~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
+....| .+|...+.....+ ...|++++.+.||.+ +.+..........+. . .....+.
T Consensus 410 ----------~g~~~YaaaKa~l~~lA~~~-~~~gi~v~sI~pG~~-~tgm~~~~~~~~~~~-~---------~g~~~l~ 467 (525)
T 3qp9_A 410 ----------AGQGAYAAGTAFLDALAGQH-RADGPTVTSVAWSPW-EGSRVTEGATGERLR-R---------LGLRPLA 467 (525)
T ss_dssp ----------TTCHHHHHHHHHHHHHHTSC-CSSCCEEEEEEECCB-TTSGGGSSHHHHHHH-H---------TTBCCBC
T ss_pred ----------CCCHHHHHHHHHHHHHHHHH-HhCCCCEEEEECCcc-ccccccchhhHHHHH-h---------cCCCCCC
Confidence 224467 6666555554333 235999999999998 332110111111111 1 1124688
Q ss_pred HHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHH
Q 020476 228 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGN 267 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~ 267 (325)
.+++++++..++..+.. .+. +. .+.|..+...+..
T Consensus 468 pee~a~~l~~~l~~~~~-~v~-v~---~~dw~~~~~~~~~ 502 (525)
T 3qp9_A 468 PATALTALDTALGHGDT-AVT-IA---DVDWSSFAPGFTT 502 (525)
T ss_dssp HHHHHHHHHHHHHHTCS-EEE-EC---CBCHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCC-eEE-EE---eCCHHHHHhhccc
Confidence 99999999999987642 222 22 3567766665544
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.57 E-value=7.1e-15 Score=137.04 Aligned_cols=225 Identities=16% Similarity=0.103 Sum_probs=139.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec---------CCCcccccCCCC-CccccCceeecCCchhHhhhC--
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR---------SRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r---------~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-- 85 (325)
...++++||||+|.||+++++.|+++|++|++++| +........... .......+|+.|.+++.++++
T Consensus 17 l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~ 96 (613)
T 3oml_A 17 YDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETA 96 (613)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC--
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHH
Confidence 34568999999999999999999999999999988 222221111000 000012367778877776664
Q ss_pred -----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCce
Q 020476 86 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 86 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
++|++|||||.... .....+.++..+++|+.++.++.+++ ++ .+.+++|++||.... ++.
T Consensus 97 ~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~--~~~g~IV~isS~a~~-~~~----- 168 (613)
T 3oml_A 97 IKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKK--QNYGRIIMTSSNSGI-YGN----- 168 (613)
T ss_dssp --------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT--TTCEEEEEECCHHHH-HCC-----
T ss_pred HHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCHHHc-CCC-----
Confidence 58999999997533 24467788899999999998888877 54 456799999997652 332
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|...+.....+..+ .++.+..+.|+.+-....... .......+..+
T Consensus 169 -----~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~~~-----------------~~~~~~~~~pe 226 (613)
T 3oml_A 169 -----FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEGIL-----------------PDILFNELKPK 226 (613)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CCCC-----------------CHHHHTTCCGG
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhhcc-----------------chhhhhcCCHH
Confidence 223457 6777666555554443 489999999985421111000 00112245789
Q ss_pred HHHHHHHHHHcCCC--CCceEEeeCC--------------------CCCCHHHHHHHHHHHhCCC
Q 020476 230 DIVNLIYEALSNPS--YRGVINGTAP--------------------NPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~~~~~~~~--------------------~~~s~~e~~~~i~~~~g~~ 272 (325)
|+|.+++.++.... .+.++++.+| ...+..++.+.+.+..+..
T Consensus 227 dvA~~v~~L~s~~~~~tG~~i~vdGG~~~~~~~~~~~g~~~~~~~~~~~~~e~~~~~w~~i~~~~ 291 (613)
T 3oml_A 227 LIAPVVAYLCHESCEDNGSYIESAAGWATKLHMVRGKGAVLRPSLDDPVTIEYVKDVWSNVTDMS 291 (613)
T ss_dssp GTHHHHHHTTSTTCCCCSCEEEEETTEEEEECCCBCCCCCSSSSTTSCCCHHHHHHTHHHHTCCT
T ss_pred HHHHHHHHhcCCCcCCCceEEEECCCeEEEEEEEecCCEEecCccccCCCHHHHHHHHHHhhccc
Confidence 99999999887643 2336666543 1245556666666665543
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.53 E-value=1.6e-13 Score=118.70 Aligned_cols=166 Identities=10% Similarity=-0.004 Sum_probs=108.6
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCC---------Cc---ccccCCC-CC---ccccCceeecCC--c-
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSR---------SK---AELIFPG-KK---TRFFPGVMIAEE--P- 78 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~---------~~---~~~~~~~-~~---~~~~~~~d~~d~--~- 78 (325)
.++++||||++ .||.+++++|+++|++|++.+|++ ++ ....... .. ......+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~ 81 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAND 81 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHHHHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCccccccccchHHHHHHHHHHHhhcccccccccccccccccchhh
Confidence 46899999875 999999999999999999777553 11 1111110 00 001122344433 3
Q ss_pred -----------------hhHhhhC-------CCCEEEECCCCCC-----CCCCChhhHHHHHHHhhHHHHHHHHHHhcCC
Q 020476 79 -----------------QWRDCIQ-------GSTAVVNLAGTPI-----GTRWSSEIKKEIKESRIRVTSKVVDLINESP 129 (325)
Q Consensus 79 -----------------~~~~~~~-------~~d~vi~~a~~~~-----~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~ 129 (325)
++.++++ ++|++|||||... ......+.+...+++|+.++..+.+++....
T Consensus 82 ~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m 161 (329)
T 3lt0_A 82 IDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIM 161 (329)
T ss_dssp CCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGE
T ss_pred hhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6665543 6899999999631 1344667788999999999999998876531
Q ss_pred CCCCCEEEEeeeeeeeecCCCCceecCCCCCC-Cch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcC
Q 020476 130 EGVRPSVLVSATALGYYGTSETEVFDESSPSG-NDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGK 196 (325)
Q Consensus 130 ~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~-~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~ 196 (325)
...+++|++||... +.. .+.. ..| .+|.........+..+ .++++..+.||.|..+
T Consensus 162 ~~~g~Iv~isS~~~--~~~---------~~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 162 KPQSSIISLTYHAS--QKV---------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp EEEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred hhCCeEEEEeCccc--cCC---------CCcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 12268999999865 221 1223 267 6776665555444332 4899999999988754
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.34 E-value=2.1e-11 Score=113.22 Aligned_cols=225 Identities=11% Similarity=0.072 Sum_probs=137.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc--cccCCCCCccccCceee-cCCchh-Hhh---hCCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA--ELIFPGKKTRFFPGVMI-AEEPQW-RDC---IQGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~--~~~~~~~~~~~~~~~d~-~d~~~~-~~~---~~~~d~vi~ 92 (325)
.+.++||||++.||+++++.|+++|++|++.+|..... ..+...........+|+ .+.+.+ .++ +.++|++||
T Consensus 322 gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiLVn 401 (604)
T 2et6_A 322 DKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIKAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDILVN 401 (604)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHHhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEEEE
Confidence 35799999999999999999999999999988643211 11111110011223455 333332 222 237999999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|||.... ...+.+.++..+++|+.++..+.+++.... .+..++|++||.... ++. +....| .+
T Consensus 402 NAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~-~~~----------~~~~~Y~as 470 (604)
T 2et6_A 402 NAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGI-YGN----------FGQANYSSS 470 (604)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHH-SCC----------TTBHHHHHH
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhc-cCC----------CCChhHHHH
Confidence 9997533 345677889999999999777766543210 345789999997651 221 123457 67
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
|.........+..+ .|+++..|.|+. ... ......+ . ........+|+|.+++.++....
T Consensus 471 Kaal~~lt~~la~El~~~gIrVn~v~PG~--~T~--m~~~~~~-------~------~~~~~~~pe~vA~~v~~L~s~~~ 533 (604)
T 2et6_A 471 KAGILGLSKTMAIEGAKNNIKVNIVAPHA--ETA--MTLSIMR-------E------QDKNLYHADQVAPLLVYLGTDDV 533 (604)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECC--CCC--C----------------------CCSSCGGGTHHHHHHTTSTTC
T ss_pred HHHHHHHHHHHHHHhCccCeEEEEEcCCC--CCc--cccccCc-------h------hhccCCCHHHHHHHHHHHhCCcc
Confidence 76665555444433 589999999983 211 1100000 0 01124578999999998886533
Q ss_pred --CCceEEeeCCC-----------------CCCHHHHHHHHHHHhCCC
Q 020476 244 --YRGVINGTAPN-----------------PVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 244 --~~~~~~~~~~~-----------------~~s~~e~~~~i~~~~g~~ 272 (325)
.+.++.+.+|. .++..++.+.+.+.....
T Consensus 534 ~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 581 (604)
T 2et6_A 534 PVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDFT 581 (604)
T ss_dssp CCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCCS
T ss_pred CCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhccc
Confidence 33367666552 356666666666665543
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=3.3e-11 Score=121.66 Aligned_cols=223 Identities=15% Similarity=0.065 Sum_probs=139.4
Q ss_pred CCeEEEECCCch-HHHHHHHHHHhCCCeEEEEe-cCCCccccc--------CCCCCccccCceeecCCchhHhhhC----
Q 020476 20 QMTVSVTGATGF-IGRRLVQRLQADNHQVRVLT-RSRSKAELI--------FPGKKTRFFPGVMIAEEPQWRDCIQ---- 85 (325)
Q Consensus 20 ~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~~--------~~~~~~~~~~~~d~~d~~~~~~~~~---- 85 (325)
.+++|||||+|. ||.++++.|++.|++|++++ |+....... ........+..+|+.|.+++.++++
T Consensus 675 gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~~~~~g~~v~~v~~DVsd~~sV~alv~~i~~ 754 (1887)
T 2uv8_A 675 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 754 (1887)
T ss_dssp TCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHHhhcCCCeEEEEEecCCCHHHHHHHHHHHHH
Confidence 468999999999 99999999999999999984 554432111 0001111244679999888776552
Q ss_pred ---------CCCEEEECCCCCCCC----CCC--hhhHHHHHHHhhHHHHHHHHHHhcC---C-CCCCCEEEEeeeeeeee
Q 020476 86 ---------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLINES---P-EGVRPSVLVSATALGYY 146 (325)
Q Consensus 86 ---------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~nv~~~~~ll~~~~~~---~-~~~~~~v~~Ss~~v~~~ 146 (325)
++|+||||||..... ... .+.+...+++|+.++..++++++.. . .+.+++|++||.... +
T Consensus 755 ~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~IVnISS~ag~-~ 833 (1887)
T 2uv8_A 755 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-F 833 (1887)
T ss_dssp CTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEEEEECSCTTC-S
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEEEEEcChHhc-c
Confidence 589999999975322 223 4667889999999999999887421 0 122589999997651 2
Q ss_pred cCCCCceecCCCCCCCch-HHHHHHHHH-HHHHhhcC--CceEEEEEeceEEcCCC-CcccchHHHHHHHcCCCCCCCcc
Q 020476 147 GTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDG-GALAKMIPLFMMFAGGPLGSGQQ 221 (325)
Q Consensus 147 g~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~ilRp~~i~g~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
+ ....| .+|...... ...+..+. .++++.+.||++.+.+- .......... ...++
T Consensus 834 g------------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~---~~~pl----- 893 (1887)
T 2uv8_A 834 G------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGI---EKMGV----- 893 (1887)
T ss_dssp S------------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHH---HTTSC-----
T ss_pred C------------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHH---HhcCC-----
Confidence 2 13457 677766665 44444332 29999999999985321 1001111111 11111
Q ss_pred eeeeccHHHHHHHHHHHHcCC-C---CCceEEee--CCC--CCCHHHHHHHH
Q 020476 222 WFSWIHLDDIVNLIYEALSNP-S---YRGVINGT--APN--PVRLAEMCDHL 265 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~-~---~~~~~~~~--~~~--~~s~~e~~~~i 265 (325)
.+...+|+|.+++.++... . .+..+.+. +|. ...+.++...+
T Consensus 894 --r~~sPEEVA~avlfLaSd~~as~iTGq~I~VDVDGG~~~~~~l~el~~~l 943 (1887)
T 2uv8_A 894 --RTFSQKEMAFNLLGLLTPEVVELCQKSPVMADLNGGLQFVPELKEFTAKL 943 (1887)
T ss_dssp --CCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEEESCSTTTSSSHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHhCCCccccccCcEEEEECCCCeeccccHHHHHHHH
Confidence 2458999999999988764 1 22355553 443 23455554443
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.9e-11 Score=110.82 Aligned_cols=224 Identities=13% Similarity=0.049 Sum_probs=138.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC---------CcccccCCCCC-ccccCceeecCCchhHhhh----
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR---------SKAELIFPGKK-TRFFPGVMIAEEPQWRDCI---- 84 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~---------~~~~~~~~~~~-~~~~~~~d~~d~~~~~~~~---- 84 (325)
..+.++||||++.||+++++.|+++|++|++.+|+. +.......... ......+|+.|.++..+++
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 346899999999999999999999999999998764 22111110000 0001124666665444332
Q ss_pred ---CCCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 85 ---QGSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 85 ---~~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
.++|++|||||.... ...+.+.++..+++|+.++..+.+++.... .+..++|++||.... ++.
T Consensus 87 ~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~-~~~-------- 157 (604)
T 2et6_A 87 KNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGL-YGN-------- 157 (604)
T ss_dssp HHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHH-HCC--------
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHc-CCC--------
Confidence 369999999997532 345677889999999999777666543210 345689999997652 331
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
+....| .+|.........+..+ .|+++..|.|+ +.. .+... . . ..........+|++
T Consensus 158 --~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T-------~m~~~---~----~--~~~~~~~~~pe~vA 218 (604)
T 2et6_A 158 --FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARS-------RMTES---I----M--PPPMLEKLGPEKVA 218 (604)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCC-------HHHHT---T----S--CHHHHTTCSHHHHH
T ss_pred --CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcC-------ccccc---c----C--ChhhhccCCHHHHH
Confidence 123457 6776665555444443 58999999996 211 11100 0 0 00011235789999
Q ss_pred HHHHHHHcCCC--CCceEEeeCC------------------CCCCHHHHHHHHHHHhC
Q 020476 233 NLIYEALSNPS--YRGVINGTAP------------------NPVRLAEMCDHLGNVLG 270 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~~~~~~~~------------------~~~s~~e~~~~i~~~~g 270 (325)
.+++.++.... .+.++.+.+| ...+..++.+.+.+...
T Consensus 219 ~~v~~L~s~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 276 (604)
T 2et6_A 219 PLVLYLSSAENELTGQFFEVAAGFYAQIRWERSGGVLFKPDQSFTAEVVAKRFSEILD 276 (604)
T ss_dssp HHHHHHTSSSCCCCSCEEEEETTEEEEEEEEECCCEECCSSTTCCHHHHHHHHHHHTC
T ss_pred HHHHHHhCCcccCCCCEEEECCCeEEEEEEEeccceecCCCCCCCHHHHHHHHHHhhc
Confidence 99999987543 2336665544 24577888877776543
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=6.9e-11 Score=119.18 Aligned_cols=224 Identities=13% Similarity=0.022 Sum_probs=138.1
Q ss_pred cCCeEEEECCCch-HHHHHHHHHHhCCCeEEEEe-cCCCcccc----c----CCCCCccccCceeecCCchhHhhhC---
Q 020476 19 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLT-RSRSKAEL----I----FPGKKTRFFPGVMIAEEPQWRDCIQ--- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~-r~~~~~~~----~----~~~~~~~~~~~~d~~d~~~~~~~~~--- 85 (325)
..+++|||||+|. ||.++++.|++.|++|++++ |+...... + ...........+|+.|.+++.++++
T Consensus 651 ~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~el~~~G~~v~~v~~DVsd~esV~alv~~i~ 730 (1878)
T 2uv9_A 651 QGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYARCGARGSQLVVVPFNQGSKQDVEALVNYIY 730 (1878)
T ss_dssp TTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHH
Confidence 3468999999999 99999999999999999986 44432211 1 1111112244689999988876652
Q ss_pred --------CCCEEEECCCCCCCC----CCC--hhhHHHHHHHhhHHHHHHHHHHh---cCC-CCCCCEEEEeeeeeeeec
Q 020476 86 --------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLIN---ESP-EGVRPSVLVSATALGYYG 147 (325)
Q Consensus 86 --------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~nv~~~~~ll~~~~---~~~-~~~~~~v~~Ss~~v~~~g 147 (325)
++|+||||||..... ... .+.+...+++|+.++..++++++ .+. .+..++|++||.... +|
T Consensus 731 ~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVnISS~ag~-~g 809 (1878)
T 2uv9_A 731 DTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILPLSPNHGT-FG 809 (1878)
T ss_dssp CSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCEECSCSSS-SS
T ss_pred HhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEEEcchhhc-cC
Confidence 489999999975322 223 46678899999999988876632 211 123589999997641 22
Q ss_pred CCCCceecCCCCCCCch-HHHHHHHHHHHHH-hh--cCCceEEEEEeceEE-cCCCCcccchHHHHHHHcCCCCCCCcce
Q 020476 148 TSETEVFDESSPSGNDY-LAEVCREWEGTAL-KV--NKDVRLALIRIGIVL-GKDGGALAKMIPLFMMFAGGPLGSGQQW 222 (325)
Q Consensus 148 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~-~~--~~~~~~~ilRp~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
....| .+|.......... .+ ...++++.+.||++- .+..... ... .......++
T Consensus 810 ------------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~-~~~--~~~~~~~pl------ 868 (1878)
T 2uv9_A 810 ------------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSAN-NLV--AEGVEKLGV------ 868 (1878)
T ss_dssp ------------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHH-HHT--HHHHHTTTC------
T ss_pred ------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccc-hhh--HHHHHhcCC------
Confidence 13467 6777666553322 22 123999999999987 3321110 000 111111111
Q ss_pred eeeccHHHHHHHHHHHHcCCC----CCceEEee--CCC--CCCHHHHHHHH
Q 020476 223 FSWIHLDDIVNLIYEALSNPS----YRGVINGT--APN--PVRLAEMCDHL 265 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~----~~~~~~~~--~~~--~~s~~e~~~~i 265 (325)
.....+|+|.+++.++.... .+..+.+. +|. ...+.++...+
T Consensus 869 -r~~sPeEVA~avlfLaSd~a~s~iTGq~I~VDVDGG~~~~~~l~el~~~l 918 (1878)
T 2uv9_A 869 -RTFSQQEMAFNLLGLMAPAIVNLCQSDPVFADLNGGLQFIPDLKGLMTKL 918 (1878)
T ss_dssp -CCBCHHHHHHHHHHHHSHHHHHHHTTSCEEEEESCSGGGCTTHHHHHHHH
T ss_pred -CCCCHHHHHHHHHHHhCCcccccccCcEEEEEcCCCccccCCHHHHHHHH
Confidence 23489999999998886532 23455552 443 24566665544
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.22 E-value=6.1e-12 Score=91.57 Aligned_cols=93 Identities=18% Similarity=0.169 Sum_probs=70.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
++|+|+|+|+ |++|+.+++.|.+.| ++|++++|++++........ .....+|+.+.+.+.++++++|+|||+++..
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~--~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~ 80 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNRMG--VATKQVDAKDEAGLAKALGGFDAVISAAPFF 80 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHTTT--CEEEECCTTCHHHHHHHTTTCSEEEECSCGG
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhCC--CcEEEecCCCHHHHHHHHcCCCEEEECCCch
Confidence 4579999999 999999999999999 99999999876654433211 0133567778888989999999999998631
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
....+++++.+ .+++++
T Consensus 81 -------------------~~~~~~~~~~~--~g~~~~ 97 (118)
T 3ic5_A 81 -------------------LTPIIAKAAKA--AGAHYF 97 (118)
T ss_dssp -------------------GHHHHHHHHHH--TTCEEE
T ss_pred -------------------hhHHHHHHHHH--hCCCEE
Confidence 13467788887 565543
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-10 Score=101.01 Aligned_cols=233 Identities=9% Similarity=-0.067 Sum_probs=138.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCCcccc----------------cCCCCCccccCceeecCCchhH
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAEL----------------IFPGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~----------------~~~~~~~~~~~~~d~~d~~~~~ 81 (325)
..+++|||||++.||.++++.|++ .|.+|++++|+.+.... ............+|+.|++.+.
T Consensus 46 ~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~G~~a~~i~~Dvtd~~~v~ 125 (405)
T 3zu3_A 46 GPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQKGLYAKSINGDAFSDEIKQ 125 (405)
T ss_dssp CCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 356899999999999999999999 99999999987654221 0111111123457999988777
Q ss_pred hhhC-------CCCEEEECCCCCC---------------C----------------------CCCChhhHHHHHHHhhHH
Q 020476 82 DCIQ-------GSTAVVNLAGTPI---------------G----------------------TRWSSEIKKEIKESRIRV 117 (325)
Q Consensus 82 ~~~~-------~~d~vi~~a~~~~---------------~----------------------~~~~~~~~~~~~~~nv~~ 117 (325)
++++ ++|++||+||... + ...+.+.++..+++|..+
T Consensus 126 ~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t~ee~~~~v~Vn~~~ 205 (405)
T 3zu3_A 126 LTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPATQSEIDSTVAVMGGE 205 (405)
T ss_dssp HHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCCHHHHHHHHHhhchh
Confidence 6653 6899999998630 1 234667788888888876
Q ss_pred HH-HHHHHHhc--CCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHHHHHHhhc---C-CceEEE
Q 020476 118 TS-KVVDLINE--SPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVN---K-DVRLAL 187 (325)
Q Consensus 118 ~~-~ll~~~~~--~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~~---~-~~~~~i 187 (325)
.. .+++++.. +.....++|.+||.+.. .+ .+.. ..| .+|...+.....+..+ . |+++..
T Consensus 206 ~~~~~~~~~~~~~m~~~gG~IVniSSi~~~-~~----------~p~~~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNa 274 (405)
T 3zu3_A 206 DWQMWIDALLDAGVLAEGAQTTAFTYLGEK-IT----------HDIYWNGSIGAAKKDLDQKVLAIRESLAAHGGGDARV 274 (405)
T ss_dssp HHHHHHHHHHHHTCEEEEEEEEEEECCCCG-GG----------TTTTTTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHHHHHHhhhhCCcEEEEEeCchhh-Cc----------CCCccchHHHHHHHHHHHHHHHHHHHhCcccCeEEEE
Confidence 65 44444331 11123589999987651 11 1222 567 6676666555444443 5 899999
Q ss_pred EEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCC--CCCHHHHHHHH
Q 020476 188 IRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPN--PVRLAEMCDHL 265 (325)
Q Consensus 188 lRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~--~~s~~e~~~~i 265 (325)
+.||.+-.+....... .+.+......++ ...-..+|++.++..++.+.-.+....+.++. .+.-+|+-+-+
T Consensus 275 VaPG~i~T~~s~~ip~-~p~y~~~l~~~m------kr~G~~Ed~a~~i~~L~sd~l~~~~~~~D~~~~~r~d~~e~~~~~ 347 (405)
T 3zu3_A 275 SVLKAVVSQASSAIPM-MPLYLSLLFKVM------KEKGTHEGCIEQVYSLYKDSLCGDSPHMDQEGRLRADYKELDPEV 347 (405)
T ss_dssp EECCCCCCHHHHTSTT-HHHHHHHHHHHH------HHHTCCCCHHHHHHHHHHHTTSSSCCCBCTTSCEECCHHHHCHHH
T ss_pred EEeCCCcCchhhcCCC-CcHHHHHHHHHH------hcCCCcHHHHHHHHHHHhccccCCCCCcCCCcCCCCchhhcCHHH
Confidence 9999887652111111 111111000011 11233467888888888764333332233332 34555665555
Q ss_pred HHHh
Q 020476 266 GNVL 269 (325)
Q Consensus 266 ~~~~ 269 (325)
.+..
T Consensus 348 q~~~ 351 (405)
T 3zu3_A 348 QNQV 351 (405)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5443
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.5e-11 Score=115.13 Aligned_cols=199 Identities=16% Similarity=0.133 Sum_probs=134.6
Q ss_pred CCeEEEECCCchHHHHHHHHHH-hCCC-eEEEEecCCCccc---cc----CCCCCccccCceeecCCchhHhhhC-----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQ-ADNH-QVRVLTRSRSKAE---LI----FPGKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~-~~g~-~V~~~~r~~~~~~---~~----~~~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.++++||||+|.||..++++|+ ++|. .|+.++|+..... .. ...........+|+.|.+++.++++
T Consensus 530 ~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~G~~v~~~~~Dvsd~~~v~~~~~~~~~~ 609 (795)
T 3slk_A 530 AGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAYGAEVSLQACDVADRETLAKVLASIPDE 609 (795)
T ss_dssp TSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred ccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHh
Confidence 3579999999999999999999 7898 5999999843321 11 1111112245689999998888775
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
.+|+||||||.... ...+.+.++..+++|+.++.++.+++.. .. +||++||.... .|. +..
T Consensus 610 ~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~---~l-~iV~~SS~ag~-~g~----------~g~ 674 (795)
T 3slk_A 610 HPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP---DV-ALVLFSSVSGV-LGS----------GGQ 674 (795)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT---TS-EEEEEEETHHH-HTC----------SSC
T ss_pred CCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh---CC-EEEEEccHHhc-CCC----------CCC
Confidence 46999999997533 3456678889999999999999999854 33 89999997652 332 234
Q ss_pred Cch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
..| .+|...+.....+. ..|++++.+.||.+-..+- ........ ..... .....+..++....+..++
T Consensus 675 ~~YaAaka~~~alA~~~~-~~Gi~v~sI~pG~v~t~g~--~~~~~~~~~~~~~~-------~g~~~l~~~e~~~~~~~~l 744 (795)
T 3slk_A 675 GNYAAANSFLDALAQQRQ-SRGLPTRSLAWGPWAEHGM--ASTLREAEQDRLAR-------SGLLPISTEEGLSQFDAAC 744 (795)
T ss_dssp HHHHHHHHHHHHHHHHHH-HTTCCEEEEEECCCSCCCH--HHHHHHHHHHHHHH-------TTBCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-HcCCeEEEEECCeECcchh--hccccHHHHHHHHh-------cCCCCCCHHHHHHHHHHHH
Confidence 567 66655555554444 3599999999998875531 11111100 11100 1123577888888888888
Q ss_pred cCCC
Q 020476 240 SNPS 243 (325)
Q Consensus 240 ~~~~ 243 (325)
..+.
T Consensus 745 ~~~~ 748 (795)
T 3slk_A 745 GGAH 748 (795)
T ss_dssp TSSC
T ss_pred hCCC
Confidence 7654
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=8.3e-12 Score=122.33 Aligned_cols=201 Identities=15% Similarity=0.094 Sum_probs=128.1
Q ss_pred CCeEEEECCCch-HHHHHHHHHHhCCCeEEEE-ecCCCcccc----cCCC----CCccccCceeecCCchhHhhhC----
Q 020476 20 QMTVSVTGATGF-IGRRLVQRLQADNHQVRVL-TRSRSKAEL----IFPG----KKTRFFPGVMIAEEPQWRDCIQ---- 85 (325)
Q Consensus 20 ~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~-~r~~~~~~~----~~~~----~~~~~~~~~d~~d~~~~~~~~~---- 85 (325)
.++++||||+|. ||.++++.|++.|++|+++ .|+.+.... +... ........+|+.|.+++.++++
T Consensus 476 GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ael~a~Ga~V~vV~~DVTD~esVeaLVe~I~e 555 (1688)
T 2pff_A 476 DKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAKYGAKGSTLIVVPFNQGSKQDVEALIEFIYD 555 (1688)
T ss_dssp SCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTTTCCTTCEEEEEECCSSSTTHHHHHHHHHHS
T ss_pred CCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCCHHHHHHHHHHHHH
Confidence 357999999998 9999999999999999998 465443321 1111 1111234679999988876652
Q ss_pred ---------CCCEEEECCCCCCCC----CCC--hhhHHHHHHHhhHHHHHHHHHHhc---CC-CCCCCEEEEeeeeeeee
Q 020476 86 ---------GSTAVVNLAGTPIGT----RWS--SEIKKEIKESRIRVTSKVVDLINE---SP-EGVRPSVLVSATALGYY 146 (325)
Q Consensus 86 ---------~~d~vi~~a~~~~~~----~~~--~~~~~~~~~~nv~~~~~ll~~~~~---~~-~~~~~~v~~Ss~~v~~~ 146 (325)
++|+||||||..... ... .+.+...+++|+.++..++++++. +. .+.+++|++||.... +
T Consensus 556 ~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrIVnISSiAG~-~ 634 (1688)
T 2pff_A 556 TEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVILPMSPNHGT-F 634 (1688)
T ss_dssp CTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEECCCCCSCTTT-S
T ss_pred hccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEEEEEEChHhc-c
Confidence 489999999975322 223 566788999999999998887722 11 122579999987541 2
Q ss_pred cCCCCceecCCCCCCCch-HHHHHHHHH-HHHHhhcC--CceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcce
Q 020476 147 GTSETEVFDESSPSGNDY-LAEVCREWE-GTALKVNK--DVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQW 222 (325)
Q Consensus 147 g~~~~~~~~e~~~~~~~y-~~k~~~~~~-~~~~~~~~--~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (325)
+ ....| .+|...+.. ......+. .++++.+.||++.+.+........ .... ... .
T Consensus 635 G------------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~e~~-------~~~l-~~i-p 693 (1688)
T 2pff_A 635 G------------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNII-------AEGI-EKM-G 693 (1688)
T ss_dssp S------------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTTTTC-------STTT-SSS-S
T ss_pred C------------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCchHH-------HHHH-HhC-C
Confidence 2 13457 677766665 34333332 388899999998853210000000 0000 000 1
Q ss_pred eeeccHHHHHHHHHHHHcCC
Q 020476 223 FSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~ 242 (325)
......+|+|.+++.++...
T Consensus 694 lR~~sPEEVA~aIlFLaSd~ 713 (1688)
T 2pff_A 694 VRTFSQKEMAFNLLGLLTPE 713 (1688)
T ss_dssp CCCCCCCTTHHHHHHHTSTT
T ss_pred CCCCCHHHHHHHHHHHhCCC
Confidence 12347899999999998765
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.16 E-value=4.8e-11 Score=102.47 Aligned_cols=115 Identities=15% Similarity=0.161 Sum_probs=81.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccc--cCCCCCccccCcee-ecCCchhHhhhCCCCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL--IFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d-~~d~~~~~~~~~~~d~vi~~ 93 (325)
++|||+|+||+|++|..++..|+++| ++|+++++++..... +..... ...+. +.+.+++.++++++|+|||+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~~~~~~dL~~~~~---~~~v~~~~~t~d~~~al~gaDvVi~~ 83 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDT---GAVVRGFLGQQQLEAALTGMDLIIVP 83 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSHHHHHHHHHTSCS---SCEEEEEESHHHHHHHHTTCSEEEEC
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCcHhHHHHhhcccc---cceEEEEeCCCCHHHHcCCCCEEEEc
Confidence 45799999999999999999999988 799999987641110 111100 00111 12345777889999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
|+.+.... ....++...|+..++++++++.+ .+.+.+++++|-
T Consensus 84 ag~~~~~g---~~r~dl~~~N~~~~~~i~~~i~~--~~p~~~viv~SN 126 (326)
T 1smk_A 84 AGVPRKPG---MTRDDLFKINAGIVKTLCEGIAK--CCPRAIVNLISN 126 (326)
T ss_dssp CCCCCCSS---CCCSHHHHHHHHHHHHHHHHHHH--HCTTSEEEECCS
T ss_pred CCcCCCCC---CCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEECC
Confidence 99653221 12346688999999999999998 566778888763
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.15 E-value=6e-11 Score=102.11 Aligned_cols=116 Identities=16% Similarity=0.157 Sum_probs=82.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecC----CCcccc----cCCCCCccccCceeecCCchhHhh
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRS----RSKAEL----IFPGKKTRFFPGVMIAEEPQWRDC 83 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~----~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~ 83 (325)
.+|||+||||+||+|++++..|+..|. +|.+++++ .++... +..... .+ ..++...+.+.++
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~--~~-~~~i~~~~~~~~a 80 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAF--PL-LAGMTAHADPMTA 80 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTC--TT-EEEEEEESSHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcc--cc-cCcEEEecCcHHH
Confidence 457999999999999999999998875 79999887 321211 111100 01 2466666778888
Q ss_pred hCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 84 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
++++|+|||+||.+.. ......++...|+..++++++++++.+....+++++|.
T Consensus 81 l~~aD~Vi~~ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 81 FKDADVALLVGARPRG---PGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp TTTCSEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred hCCCCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 9999999999997532 22345678899999999999999983102236777764
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=1.9e-10 Score=98.28 Aligned_cols=113 Identities=20% Similarity=0.251 Sum_probs=80.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEec--CCCcccc----cCCCCCcccc-CceeecCCc-hhHhhhCCCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAEL----IFPGKKTRFF-PGVMIAEEP-QWRDCIQGSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~----~~~~~~~~~~-~~~d~~d~~-~~~~~~~~~d~v 90 (325)
|||+||||+|++|++++..|+..+. ++.++++ +..+... +..... .. ..+++.+.+ .+.++++++|+|
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~--~~~~~~~i~~~~d~l~~al~gaD~V 78 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA--GTRSDANIYVESDENLRIIDESDVV 78 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT--TSCCCCEEEEEETTCGGGGTTCSEE
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhHH--hcCCCeEEEeCCcchHHHhCCCCEE
Confidence 6999999999999999999998874 6888887 4321110 000000 01 234555533 467889999999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
||+||.+.. ......++...|+..++++++++++ .+ +++++++|-
T Consensus 79 i~~Ag~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~--~~-~~~vlv~SN 123 (313)
T 1hye_A 79 IITSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE--IC-DTKIFVITN 123 (313)
T ss_dssp EECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HC-CCEEEECSS
T ss_pred EECCCCCCC---CCCcHHHHHHHHHHHHHHHHHHHHH--hC-CeEEEEecC
Confidence 999997522 1234567889999999999999999 56 778888763
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.11 E-value=2.7e-10 Score=99.73 Aligned_cols=208 Identities=11% Similarity=-0.067 Sum_probs=125.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCCccccc----------------CCCCCccccCceeecCCchhH
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELI----------------FPGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~----------------~~~~~~~~~~~~d~~d~~~~~ 81 (325)
..+++|||||++.||.++++.|++ .|.+|++++|+.+..... ...........+|+.|++.+.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvtd~~~v~ 139 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAFSDAARA 139 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTSHHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCCCHHHHH
Confidence 356899999999999999999999 999999999976543211 111111123457999888766
Q ss_pred hhh--------CCCCEEEECCCCC---------------CCC----------------------CCChhhHHHHHHHhhH
Q 020476 82 DCI--------QGSTAVVNLAGTP---------------IGT----------------------RWSSEIKKEIKESRIR 116 (325)
Q Consensus 82 ~~~--------~~~d~vi~~a~~~---------------~~~----------------------~~~~~~~~~~~~~nv~ 116 (325)
+++ -++|++|||||.. .+. ..+.+.++..+++|..
T Consensus 140 ~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~v~Vn~~ 219 (422)
T 3s8m_A 140 QVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPASAQEIEDTITVMGG 219 (422)
T ss_dssp HHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCCHHHHHHHHHHHSS
T ss_pred HHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCCHHHHHHHHHhhch
Confidence 544 3589999999862 011 2456677777778777
Q ss_pred HHH-HHHHHHhc--CCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEE
Q 020476 117 VTS-KVVDLINE--SPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIR 189 (325)
Q Consensus 117 ~~~-~ll~~~~~--~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilR 189 (325)
+.. .+++++.. +..+..++|.+||.+. .- ..+. .....| .+|.........+..+ .|+++..+.
T Consensus 220 ~~~~~~~~a~~~~~m~~~gG~IVniSSi~g--~~---~~p~----~~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVa 290 (422)
T 3s8m_A 220 QDWELWIDALEGAGVLADGARSVAFSYIGT--EI---TWPI----YWHGALGKAKVDLDRTAQRLNARLAKHGGGANVAV 290 (422)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEEEEECCC--GG---GHHH----HTSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhCCCEEEEEeCchh--hc---cCCC----ccchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEE
Confidence 654 55555432 1012357999998764 11 0000 001356 6676665555544443 589999999
Q ss_pred eceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 190 IGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 190 p~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
||.|-.+....... .+.+......++. ..-..+|++.++..++.+.
T Consensus 291 PG~i~T~~~~~ip~-~~~~~~~~~~~m~------r~G~pEdva~~v~~L~sd~ 336 (422)
T 3s8m_A 291 LKSVVTQASAAIPV-MPLYISMVYKIMK------EKGLHEGTIEQLDRLFRER 336 (422)
T ss_dssp ECCCCCTTGGGSTH-HHHHHHHHHHHHH------HTTCCCCHHHHHHHHHHHT
T ss_pred cCCCcChhhhcCCC-ChHHHHHHHhhhc------CCcChHHHHHHHHHHhcch
Confidence 99998764322211 1111100000110 1222367888888888664
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=9.8e-10 Score=96.84 Aligned_cols=209 Identities=10% Similarity=-0.054 Sum_probs=123.7
Q ss_pred CCeEEEECCCchHHHH--HHHHHHhCCCeEEEEecCCCcccc------------c----CCCCCccccCceeecCCchhH
Q 020476 20 QMTVSVTGATGFIGRR--LVQRLQADNHQVRVLTRSRSKAEL------------I----FPGKKTRFFPGVMIAEEPQWR 81 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~--l~~~L~~~g~~V~~~~r~~~~~~~------------~----~~~~~~~~~~~~d~~d~~~~~ 81 (325)
.+++|||||++.||.+ +++.|++.|++|++++|+...... . ...........+|+.|.+++.
T Consensus 60 gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd~~~v~ 139 (418)
T 4eue_A 60 PKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFSNETKD 139 (418)
T ss_dssp CSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCCHHHHH
Confidence 5689999999999999 999999999999999997644211 0 001111123467999988777
Q ss_pred hhhC-------CCCEEEECCCCC-------------CC------------------------CCCChhhHHHHHHHhhHH
Q 020476 82 DCIQ-------GSTAVVNLAGTP-------------IG------------------------TRWSSEIKKEIKESRIRV 117 (325)
Q Consensus 82 ~~~~-------~~d~vi~~a~~~-------------~~------------------------~~~~~~~~~~~~~~nv~~ 117 (325)
++++ ++|++||+||.. .. .....+.+...+++|..+
T Consensus 140 ~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t~e~~~~~~~vn~~~ 219 (418)
T 4eue_A 140 KVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSASIEEIEETRKVMGGE 219 (418)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBCCHHHHHHHHHHHSSH
T ss_pred HHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhhHH
Confidence 6553 589999999863 00 123556667777777665
Q ss_pred HH-HHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-HHHHHHHHHHHHHhhc----CCceEEE
Q 020476 118 TS-KVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVN----KDVRLAL 187 (325)
Q Consensus 118 ~~-~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~~k~~~~~~~~~~~~~----~~~~~~i 187 (325)
.. .++.++... .....++|.+||.+. .- ..|.. ..| .+|...+.....+..+ .|+++..
T Consensus 220 ~~~~~~~~l~~~~~~~~gg~IV~iSSi~~--~~---------~~p~~~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~ 288 (418)
T 4eue_A 220 DWQEWCEELLYEDCFSDKATTIAYSYIGS--PR---------TYKIYREGTIGIAKKDLEDKAKLINEKLNRVIGGRAFV 288 (418)
T ss_dssp HHHHHHHHHHHTTCEEEEEEEEEEECCCC--GG---------GTTTTTTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEE
T ss_pred HHHHHHHHHHHHhhhcCCcEEEEEeCchh--cC---------CCCccccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEE
Confidence 44 445554321 012357888888754 11 11223 567 6676655544444432 4899999
Q ss_pred EEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCc
Q 020476 188 IRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246 (325)
Q Consensus 188 lRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~ 246 (325)
+.||.|-.+....... .+.+......++. ..-..+|++.++..++.+.-..|
T Consensus 289 V~PG~v~T~~s~~ip~-~p~y~~~~~~~mk------~~G~~E~v~e~~~~L~sd~~~~g 340 (418)
T 4eue_A 289 SVNKALVTKASAYIPT-FPLYAAILYKVMK------EKNIHENCIMQIERMFSEKIYSN 340 (418)
T ss_dssp EECCCCCCHHHHTSTT-HHHHHHHHHHHHH------HTTCCCCHHHHHHHHHHHTTSSS
T ss_pred EECCcCcChhhhcCCC-CcHHHHHHHHHHh------hcCChHHHHHHHHHHhhccccCC
Confidence 9999887652111111 1111000000100 01224678888888887654444
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=99.05 E-value=4.1e-10 Score=95.69 Aligned_cols=114 Identities=15% Similarity=0.174 Sum_probs=76.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEec--CCCcccccCCCC-Cc-cccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTR--SRSKAELIFPGK-KT-RFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r--~~~~~~~~~~~~-~~-~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||+||||+|++|+.++..|+..+. ++.++++ ++++........ .. .....+.+.. +. .++++++|+|||+|
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~~~~~~~v~~-~~-~~a~~~aDvVi~~a 78 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIAYDSNTRVRQ-GG-YEDTAGSDVVVITA 78 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHTTTCCCEEEE-CC-GGGGTTCSEEEECC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHhhCCCcEEEe-CC-HHHhCCCCEEEEcC
Confidence 6999999999999999999998875 6888887 443211100000 00 0001122221 12 56789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
+.+.. ......++...|+..++++++++++ .+.+.+++++|-
T Consensus 79 g~~~~---~g~~r~dl~~~N~~i~~~i~~~i~~--~~p~~~viv~SN 120 (303)
T 1o6z_A 79 GIPRQ---PGQTRIDLAGDNAPIMEDIQSSLDE--HNDDYISLTTSN 120 (303)
T ss_dssp CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHT--TCSCCEEEECCS
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--HCCCcEEEEeCC
Confidence 96522 1224557788999999999999999 566778887763
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=98.89 E-value=2.4e-09 Score=113.44 Aligned_cols=165 Identities=16% Similarity=0.138 Sum_probs=108.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccc-------cCCCCCccccCceeecCCchhHhhhC------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAEL-------IFPGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~-------~~~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
.++++||||+|.||.+++++|+++|.+ |++++|+..+... +...........+|+.|.+++.++++
T Consensus 1884 ~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dvsd~~~v~~~~~~~~~~g 1963 (2512)
T 2vz8_A 1884 HKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQGVQVLVSTSNASSLDGARSLITEATQLG 1963 (2512)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHTTCEEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhCCCEEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 468999999999999999999999987 8888888654311 11111112244689999888776653
Q ss_pred CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 86 GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 86 ~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
.+|+|||+||.... ...+.+.+...+++|+.++.++.+++........+||++||.... .|. +...
T Consensus 1964 ~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~-~g~----------~g~~ 2032 (2512)
T 2vz8_A 1964 PVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCG-RGN----------AGQA 2032 (2512)
T ss_dssp CEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHH-TTC----------TTCH
T ss_pred CCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhc-CCC----------CCcH
Confidence 58999999997432 233455677788999999999987776422234789999997651 221 2234
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcC
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~ 196 (325)
.| .+|.........+..+ |++...+..+.+-+.
T Consensus 2033 ~Y~aaKaal~~l~~~rr~~-Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A 2033 NYGFANSAMERICEKRRHD-GLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp HHHHHHHHHHHHHHHHHHT-TSCCCEEEECCBCTT
T ss_pred HHHHHHHHHHHHHHHHHHC-CCcEEEEEccCcCCc
Confidence 67 6777666666655554 899888888765443
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.81 E-value=4.9e-09 Score=91.69 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=59.5
Q ss_pred HHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCE
Q 020476 10 LTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 10 ~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
.++...|+...|||+|+|| |++|+.+++.|.+ .++|++.+|+.++......... ...+|+.|.+++.++++++|+
T Consensus 6 ~~~~~~~~g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~~~~~---~~~~d~~d~~~l~~~~~~~Dv 80 (365)
T 3abi_A 6 HHHHHHIEGRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVKEFAT---PLKVDASNFDKLVEVMKEFEL 80 (365)
T ss_dssp ----------CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHTTTSE---EEECCTTCHHHHHHHHTTCSE
T ss_pred ccccccccCCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHhccCC---cEEEecCCHHHHHHHHhCCCE
Confidence 3456678888899999998 9999999998865 5899999998776655544322 345788899999999999999
Q ss_pred EEECCCC
Q 020476 90 VVNLAGT 96 (325)
Q Consensus 90 vi~~a~~ 96 (325)
||++++.
T Consensus 81 Vi~~~p~ 87 (365)
T 3abi_A 81 VIGALPG 87 (365)
T ss_dssp EEECCCG
T ss_pred EEEecCC
Confidence 9999863
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.76 E-value=2.1e-08 Score=75.27 Aligned_cols=73 Identities=19% Similarity=0.173 Sum_probs=54.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
+++|+|+|+ |.+|+.+++.|.+.|++|++++|+++.......... .....|..+.+.+.++ +.++|+||++++
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~--~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 79 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIG 79 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCS--EEEECCTTCHHHHHTTTGGGCSEEEECCC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCC--EEEEeCCCCHHHHHhcCCCCCCEEEECCC
Confidence 458999997 999999999999999999999997755443332211 1223455566666665 678999999986
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.73 E-value=1.4e-08 Score=90.96 Aligned_cols=106 Identities=14% Similarity=0.202 Sum_probs=73.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
+++|+|+| +|++|+++++.|++.|++|++++|+.++...............+|+.|.+.+.++++++|+||||++...
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~- 80 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTF- 80 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--C-
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCcccc-
Confidence 56899998 7999999999999999999999998766544433211011234577788888888999999999998531
Q ss_pred CCCChhhHHHHHH--Hh-------hHHHHHHHHHHhcCCCCC
Q 020476 100 TRWSSEIKKEIKE--SR-------IRVTSKVVDLINESPEGV 132 (325)
Q Consensus 100 ~~~~~~~~~~~~~--~n-------v~~~~~ll~~~~~~~~~~ 132 (325)
.........+ .| ...+.++++++++ .++
T Consensus 81 ---~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~--aGv 117 (450)
T 1ff9_A 81 ---HATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKD--AGI 117 (450)
T ss_dssp ---HHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHH--TTC
T ss_pred ---chHHHHHHHhCCCeEEEeecccHHHHHHHHHHHH--CCC
Confidence 1111122222 22 2367889999998 554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.66 E-value=6.4e-08 Score=82.47 Aligned_cols=109 Identities=17% Similarity=0.217 Sum_probs=75.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCccc--ccCCCCCccccCceeecC---CchhHhhhCCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAE--LIFPGKKTRFFPGVMIAE---EPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~--~~~~~~~~~~~~~~d~~d---~~~~~~~~~~~d~vi~~ 93 (325)
|||.|+||+|++|..++..|++.| ++|.++++++.... .+.... . ..++.. .+++.++++++|+||++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~~~~~a~dL~~~~----~-~~~l~~~~~t~d~~~a~~~aDvVvi~ 75 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIE----T-RATVKGYLGPEQLPDCLKGCDVVVIP 75 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSS----S-SCEEEEEESGGGHHHHHTTCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCccHHHHHHHhccC----c-CceEEEecCCCCHHHHhCCCCEEEEC
Confidence 699999999999999999999888 79999999872211 111111 1 123332 25677889999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
||.+.... ....++...|+..++.+++.+.+.. ...+++++
T Consensus 76 ag~~~~~g---~~r~dl~~~n~~i~~~i~~~i~~~~-p~a~viv~ 116 (314)
T 1mld_A 76 AGVPRKPG---MTRDDLFNTNATIVATLTAACAQHC-PDAMICII 116 (314)
T ss_dssp CSCCCCTT---CCGGGGHHHHHHHHHHHHHHHHHHC-TTSEEEEC
T ss_pred CCcCCCCC---CcHHHHHHHHHHHHHHHHHHHHhhC-CCeEEEEE
Confidence 99753222 2233567899999999999998842 22345554
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=98.65 E-value=1.2e-08 Score=86.13 Aligned_cols=78 Identities=17% Similarity=0.167 Sum_probs=60.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++++||||+|.+|+++++.|++.|.+|++++|+.++........ .......+|+.+.+++.++++++|+|||+|+
T Consensus 118 ~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~ag 197 (287)
T 1lu9_A 118 KGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAGA 197 (287)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECCC
Confidence 4568999999999999999999999999999999865433221100 0011345788888999999999999999997
Q ss_pred C
Q 020476 96 T 96 (325)
Q Consensus 96 ~ 96 (325)
.
T Consensus 198 ~ 198 (287)
T 1lu9_A 198 I 198 (287)
T ss_dssp T
T ss_pred c
Confidence 5
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=2.7e-07 Score=98.25 Aligned_cols=229 Identities=13% Similarity=0.069 Sum_probs=130.4
Q ss_pred cCCeEEEECCCch-HHHHHHHHHHhCCCeEEEEecCCCc-----cccc----CCCCCccccCceeecCCchhHhhh----
Q 020476 19 SQMTVSVTGATGF-IGRRLVQRLQADNHQVRVLTRSRSK-----AELI----FPGKKTRFFPGVMIAEEPQWRDCI---- 84 (325)
Q Consensus 19 ~~~~ilI~GatG~-iG~~l~~~L~~~g~~V~~~~r~~~~-----~~~~----~~~~~~~~~~~~d~~d~~~~~~~~---- 84 (325)
..++++||||++. ||.++++.|++.|.+|++.+|+.+. .... ...........+|+.|.+++.+++
T Consensus 2135 ~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i~ 2214 (3089)
T 3zen_D 2135 XDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWVG 2214 (3089)
T ss_dssp CCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHHT
T ss_pred CCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHHH
Confidence 4568999999999 9999999999999999999998765 2111 111111123457999988777653
Q ss_pred C-------CCCEEEECCCCC----C----CCCCCh----hhHHHHHHHhhHHHHHHHHHHhcCC--CCCC-CEEEEeeee
Q 020476 85 Q-------GSTAVVNLAGTP----I----GTRWSS----EIKKEIKESRIRVTSKVVDLINESP--EGVR-PSVLVSATA 142 (325)
Q Consensus 85 ~-------~~d~vi~~a~~~----~----~~~~~~----~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~-~~v~~Ss~~ 142 (325)
+ ++|++|||||.. . ...... ...+...++|+.++..++.++.... .+.. +...+...+
T Consensus 2215 ~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s 2294 (3089)
T 3zen_D 2215 TEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAERDIASRLHVVLPGS 2294 (3089)
T ss_dssp SCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCCEEEEEEEC
T ss_pred hhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCceeEEEEECC
Confidence 2 479999999971 0 011111 1234457788888777666553210 1211 111111111
Q ss_pred eeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCC
Q 020476 143 LGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPL 216 (325)
Q Consensus 143 v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~ 216 (325)
.. .+. .+....| .+|.....+...+..+ .++.++.+.||++-+.+... .......... .+
T Consensus 2295 s~-~g~---------~g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~~~~~~~~~~---~~- 2360 (3089)
T 3zen_D 2295 PN-RGM---------FGGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQNDAIVSAVEE---AG- 2360 (3089)
T ss_dssp SS-TTS---------CSSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTTTTTHHHHGG---GS-
T ss_pred cc-ccc---------CCCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccchhHHHHHHh---cC-
Confidence 10 110 0112357 6777666666555555 36889999999998543211 1111111110 01
Q ss_pred CCCcceeeeccHHHHHHHHHHHHcCCC---CCc---eEEeeCCC---CCCHHHHHHHHHH
Q 020476 217 GSGQQWFSWIHLDDIVNLIYEALSNPS---YRG---VINGTAPN---PVRLAEMCDHLGN 267 (325)
Q Consensus 217 ~~~~~~~~~v~v~D~a~a~~~~~~~~~---~~~---~~~~~~~~---~~s~~e~~~~i~~ 267 (325)
......+|+|.+++.++.... ..+ ...+.+|- ...+.++...+.+
T Consensus 2361 ------~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~~~~ 2414 (3089)
T 3zen_D 2361 ------VTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAKARE 2414 (3089)
T ss_dssp ------CBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHHHHH
T ss_pred ------CCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHHHHH
Confidence 112378999999999886432 111 23344543 3578888776543
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.59 E-value=3.3e-08 Score=84.79 Aligned_cols=103 Identities=14% Similarity=0.240 Sum_probs=71.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+|||.|+|++|++|+.++..++..| .+|.+++++..+... +.... ++..++.-.+...++++++|+||.
T Consensus 7 ~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~~----~~~~~i~~t~d~~~al~dADvVvi 82 (343)
T 3fi9_A 7 TEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHCG----FEGLNLTFTSDIKEALTDAKYIVS 82 (343)
T ss_dssp CSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHHC----CTTCCCEEESCHHHHHTTEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhCc----CCCCceEEcCCHHHHhCCCCEEEE
Confidence 45799999999999999999999888 589999987643221 11100 111222223456677899999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+||.+.. ......+....|+...+.+.+.+.+.
T Consensus 83 taG~p~k---pG~~R~dLl~~N~~I~~~i~~~i~~~ 115 (343)
T 3fi9_A 83 SGGAPRK---EGMTREDLLKGNAEIAAQLGKDIKSY 115 (343)
T ss_dssp CCC----------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9996522 23346678889999999999999884
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=70.67 Aligned_cols=74 Identities=14% Similarity=0.235 Sum_probs=51.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
.|+|+|+|+ |++|..+++.|.+.|++|++++|+++.......... ......|..+.+.+.+. ++++|+||++.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~-~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID-ALVINGDCTKIKTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS-SEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcC-cEEEEcCCCCHHHHHHcCcccCCEEEEeeC
Confidence 479999996 999999999999999999999997755433221100 00112344455555544 678999999975
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.58 E-value=1e-07 Score=71.34 Aligned_cols=73 Identities=23% Similarity=0.231 Sum_probs=56.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|++|+|+|+ |++|+++++.|.+.|++|++++++++.......... ....+|..+++.+.++ ++++|+||.+.+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~--~~~~gd~~~~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGF--DAVIADPTDESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEECCTTCHHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCC--cEEECCCCCHHHHHhCCcccCCEEEEecC
Confidence 568999997 999999999999999999999998766443322211 1334677788877765 468999999875
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.52 E-value=2.5e-07 Score=74.29 Aligned_cols=71 Identities=20% Similarity=0.288 Sum_probs=51.3
Q ss_pred cCCeEEEECC----------------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchh--
Q 020476 19 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQW-- 80 (325)
Q Consensus 19 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~-- 80 (325)
..|+|||||| ||.+|.+++++|+++|++|+.+.|+....... ..++++.+.+..
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~--------~~~~~~~~v~s~~e 73 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP--------HPNLSIREITNTKD 73 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC--------CTTEEEEECCSHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC--------CCCeEEEEHhHHHH
Confidence 3579999999 99999999999999999999999976422110 113454444333
Q ss_pred -H----hhhCCCCEEEECCCCC
Q 020476 81 -R----DCIQGSTAVVNLAGTP 97 (325)
Q Consensus 81 -~----~~~~~~d~vi~~a~~~ 97 (325)
. +.+.++|++||+||..
T Consensus 74 m~~~v~~~~~~~Dili~aAAvs 95 (232)
T 2gk4_A 74 LLIEMQERVQDYQVLIHSMAVS 95 (232)
T ss_dssp HHHHHHHHGGGCSEEEECSBCC
T ss_pred HHHHHHHhcCCCCEEEEcCccc
Confidence 2 2334799999999964
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.50 E-value=6.5e-08 Score=82.83 Aligned_cols=112 Identities=11% Similarity=0.109 Sum_probs=75.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--e-----EEEEecCCC--cc----cccCCCCCccccCceeecCCchhHhhhCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--Q-----VRVLTRSRS--KA----ELIFPGKKTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~-----V~~~~r~~~--~~----~~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
.|||+||||+|+||++++..|+..+. + +.++++++. .. ..+..... . +. -++...+...+.+++
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~~~-~-~~-~~~~~~~~~~~~~~d 79 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCAL-P-LL-KDVIATDKEEIAFKD 79 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCC-T-TE-EEEEEESCHHHHTTT
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhhhh-c-cc-CCEEEcCCcHHHhCC
Confidence 46999999999999999999988764 4 889988642 11 11111000 0 11 133333456677899
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC--CEEEEe
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR--PSVLVS 139 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~--~~v~~S 139 (325)
+|+||++||.+.. ...+..+.++.|+..++++++++++ .+.+ +++.+|
T Consensus 80 aDvVvitAg~prk---pG~tR~dll~~N~~i~~~i~~~i~~--~~~~~~~vivvs 129 (333)
T 5mdh_A 80 LDVAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDK--YAKKSVKVIVVG 129 (333)
T ss_dssp CSEEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHH--HSCTTCEEEECS
T ss_pred CCEEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH--hCCCCeEEEEcC
Confidence 9999999986522 2234567788999999999999998 4443 354444
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=2.3e-06 Score=64.98 Aligned_cols=73 Identities=15% Similarity=0.200 Sum_probs=53.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
.++|+|+|+ |.+|..+++.|.+.|++|++++|+++...... .... .....|..+.+.+.++ ++++|+||.+.+
T Consensus 19 ~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~--~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 19 SKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSG--FTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCS--EEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCC--cEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 469999995 99999999999999999999999887655544 2111 0112344455556554 678999999976
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.40 E-value=5.2e-08 Score=86.21 Aligned_cols=76 Identities=20% Similarity=0.191 Sum_probs=57.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCC-----ccccCceeecCCchhHhhhCC--CCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKK-----TRFFPGVMIAEEPQWRDCIQG--STA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~-----~~~~~~~d~~d~~~~~~~~~~--~d~ 89 (325)
||||+|+|| |++|+.+++.|++.|. +|++.+|+.++......... ......+|+.|.+++.+++++ +|+
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~Dv 79 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQI 79 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCE
Confidence 479999998 9999999999999883 89999998766443221100 011335788888999998886 999
Q ss_pred EEECCCC
Q 020476 90 VVNLAGT 96 (325)
Q Consensus 90 vi~~a~~ 96 (325)
||||++.
T Consensus 80 Vin~ag~ 86 (405)
T 4ina_A 80 VLNIALP 86 (405)
T ss_dssp EEECSCG
T ss_pred EEECCCc
Confidence 9999974
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.33 E-value=1.2e-06 Score=70.22 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=51.7
Q ss_pred cCCeEEEECC----------------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh
Q 020476 19 SQMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 19 ~~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~ 82 (325)
..++|||||| ||.+|.++++.|+++|++|++++|+..- . . ... ...+|+.+.+.+.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~-~-~~g----~~~~dv~~~~~~~~ 79 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P-T-PPF----VKRVDVMTALEMEA 79 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C-C-CTT----EEEEECCSHHHHHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c-c-CCC----CeEEccCcHHHHHH
Confidence 3579999999 7999999999999999999999886521 1 0 100 12345555544433
Q ss_pred h----hCCCCEEEECCCCC
Q 020476 83 C----IQGSTAVVNLAGTP 97 (325)
Q Consensus 83 ~----~~~~d~vi~~a~~~ 97 (325)
. +.++|++||+||..
T Consensus 80 ~v~~~~~~~Dili~~Aav~ 98 (226)
T 1u7z_A 80 AVNASVQQQNIFIGCAAVA 98 (226)
T ss_dssp HHHHHGGGCSEEEECCBCC
T ss_pred HHHHhcCCCCEEEECCccc
Confidence 3 34799999999974
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=1.4e-06 Score=74.18 Aligned_cols=115 Identities=13% Similarity=0.153 Sum_probs=71.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|+|||.|+|| |.+|..++..|+..|+ +|.++++++++........... ......+....+. +.++++|+||.++
T Consensus 1 M~~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 1 MRKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEECCCH-HHHCCCCEEEEcC
Confidence 3579999998 9999999999999997 8999998875443211000000 0011222222334 6689999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
+.+... .....++...|+...+.+.+.+.+ .....++.+.|
T Consensus 79 g~p~~~---g~~r~dl~~~n~~i~~~i~~~i~~--~~p~a~vi~~t 119 (309)
T 1ur5_A 79 GAPRKP---GMSREDLIKVNADITRACISQAAP--LSPNAVIIMVN 119 (309)
T ss_dssp CC-----------CHHHHHHHHHHHHHHHHHGG--GCTTCEEEECC
T ss_pred CCCCCC---CCCHHHHHHHHHHHHHHHHHHHHh--hCCCeEEEEcC
Confidence 865221 112345567888899999999988 34445555543
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.31 E-value=1.8e-07 Score=83.94 Aligned_cols=76 Identities=16% Similarity=0.265 Sum_probs=57.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.+++|+|+|+ |++|+.+++.|++. +++|++++|+.++...+..... .....+|+.|.+.+.++++++|+||||++.
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~-~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~ 98 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSG-SKAISLDVTDDSALDKVLADNDVVISLIPY 98 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGT-CEEEECCTTCHHHHHHHHHTSSEEEECSCG
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcC-CcEEEEecCCHHHHHHHHcCCCEEEECCch
Confidence 3568999997 99999999999998 7899999998766443322100 012246777777888888999999999874
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=98.30 E-value=8.6e-07 Score=76.37 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=59.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-----C-eEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhCCCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-----H-QVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-----~-~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
+||||+|+||||++|+.|++.|++++ + +++++.++.+..+... .... ....+++.+.+ .+.+.++|+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~~~~l~--~~~~~~~~~~~--~~~~~~~Dv 83 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEHHPHLT--PLAHRVVEPTE--AAVLGGHDA 83 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGTCTTCG--GGTTCBCEECC--HHHHTTCSE
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhhccccc--ccceeeeccCC--HHHhcCCCE
Confidence 35799999999999999999999887 4 7888765433222111 1100 00112222322 233568999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeee
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~ 142 (325)
||.|++... +..+++.+ + .+ .++|-+|+..
T Consensus 84 Vf~alg~~~-------------------s~~~~~~~-~--~G-~~vIDlSa~~ 113 (352)
T 2nqt_A 84 VFLALPHGH-------------------SAVLAQQL-S--PE-TLIIDCGADF 113 (352)
T ss_dssp EEECCTTSC-------------------CHHHHHHS-C--TT-SEEEECSSTT
T ss_pred EEECCCCcc-------------------hHHHHHHH-h--CC-CEEEEECCCc
Confidence 999987421 23556666 6 55 4688888764
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.28 E-value=2.1e-06 Score=73.26 Aligned_cols=104 Identities=21% Similarity=0.254 Sum_probs=72.4
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCcccc-CceeecCCchhHhhhCCCCE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFF-PGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~-~~~d~~d~~~~~~~~~~~d~ 89 (325)
+..+|||.|+|+ |++|..++..|+..|. +|+++++++++... +..... .. ..+.+.. +. .+.++++|+
T Consensus 2 ~~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~--~~~~~v~i~~-~~-~~a~~~aDv 76 (326)
T 3pqe_A 2 NKHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHGKA--FAPQPVKTSY-GT-YEDCKDADI 76 (326)
T ss_dssp CCSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHTGG--GSSSCCEEEE-EC-GGGGTTCSE
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhccc--cccCCeEEEe-Cc-HHHhCCCCE
Confidence 344679999996 9999999999998886 89999997654322 111100 01 1223321 12 356889999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||.+||.+.. ...+..+....|+...+.+.+.+.+.
T Consensus 77 Vvi~ag~p~k---pG~~R~dL~~~N~~Iv~~i~~~I~~~ 112 (326)
T 3pqe_A 77 VCICAGANQK---PGETRLELVEKNLKIFKGIVSEVMAS 112 (326)
T ss_dssp EEECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEecccCCC---CCccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999986522 22346678889999999999999984
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=3.9e-07 Score=73.24 Aligned_cols=73 Identities=25% Similarity=0.264 Sum_probs=51.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||+|+||+|++|+.+++.|++.|++|++++|++++.......... .....++. .+++.++++++|+||++..
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~D~Vi~~~~ 73 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRR-IAGDASIT-GMKNEDAAEACDIAVLTIP 73 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHH-HHSSCCEE-EEEHHHHHHHCSEEEECSC
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcc-ccccCCCC-hhhHHHHHhcCCEEEEeCC
Confidence 6899999999999999999999999999999986554332211000 00001232 3566677889999999974
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=98.22 E-value=2.2e-06 Score=71.26 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=46.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEec-CCCcc--cccCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTR-SRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r-~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+.+|||+|+|++|.+|+.+++.+.+ .+++++++.+ +++.. ........ ....++...+++.++++++|+||+
T Consensus 2 ~~~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~d~~~~~g---~~~~~v~~~~dl~~~l~~~DvVID 78 (273)
T 1dih_A 2 HDANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELAG---AGKTGVTVQSSLDAVKDDFDVFID 78 (273)
T ss_dssp CCCBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSSS---SSCCSCCEESCSTTTTTSCSEEEE
T ss_pred CCCCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhhhHHHHcC---CCcCCceecCCHHHHhcCCCEEEE
Confidence 33457999999999999999998875 4788885544 33221 11111000 111122223445566678999998
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
++.
T Consensus 79 ft~ 81 (273)
T 1dih_A 79 FTR 81 (273)
T ss_dssp CSC
T ss_pred cCC
Confidence 874
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-06 Score=69.86 Aligned_cols=112 Identities=18% Similarity=0.245 Sum_probs=71.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+|||.|+|+ |++|..++..|+..+. +|.+++.++++... +.... .....+.+.. +. .+.++++|+||.
T Consensus 6 ~~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~~~--~~~~~~~i~~-~~-~~a~~~aDvVii 80 (318)
T 1y6j_A 6 SRSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGL--PFMGQMSLYA-GD-YSDVKDCDVIVV 80 (318)
T ss_dssp -CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSC--CCTTCEEEC---C-GGGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHhH--HhcCCeEEEE-CC-HHHhCCCCEEEE
Confidence 4579999998 9999999999999886 89999998754332 11110 0112334443 22 456899999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
+++.+.. ......++...|+...+.+++.+.+. ...-++.+.|
T Consensus 81 ~~g~p~k---~g~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~t 123 (318)
T 1y6j_A 81 TAGANRK---PGETRLDLAKKNVMIAKEVTQNIMKY--YNHGVILVVS 123 (318)
T ss_dssp CCCC---------CHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEECS
T ss_pred cCCCCCC---CCcCHHHHHHhhHHHHHHHHHHHHHh--CCCcEEEEec
Confidence 9986521 12234567789999999999999884 3334444443
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.19 E-value=2.2e-06 Score=65.03 Aligned_cols=73 Identities=11% Similarity=0.144 Sum_probs=54.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC-ccccc---CCCCCccccCceeecCCchhHhh-hCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS-KAELI---FPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~-~~~~~---~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a 94 (325)
.++|+|+|+ |.+|+.+++.|.+.|++|++++|++. ..... .... ......|..+++.+.++ ++++|+||-+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~--~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN--ADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT--CEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCC--CeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 458999995 99999999999999999999999752 11111 1110 01334677788888776 78999999987
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
+
T Consensus 80 ~ 80 (153)
T 1id1_A 80 D 80 (153)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=98.15 E-value=7e-06 Score=70.59 Aligned_cols=93 Identities=17% Similarity=0.195 Sum_probs=54.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+|||+|+||||++|+.+++.|.++++ +++++....+........ ...+++.+.+ . +.++++|+||.|.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~~~~~-----g~~i~~~~~~-~-~~~~~~DvV~~a~g~ 78 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-----ESSLRVGDVD-S-FDFSSVGLAFFAAAA 78 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-----TEEEECEEGG-G-CCGGGCSEEEECSCH
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCccccC-----CcceEEecCC-H-HHhcCCCEEEEcCCc
Confidence 47999999999999999999997654 556654222111111000 0012222221 1 224689999999862
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
.....+++.+.+ .+.+ +|.+|+.
T Consensus 79 -------------------~~s~~~a~~~~~--aG~k-vId~Sa~ 101 (340)
T 2hjs_A 79 -------------------EVSRAHAERARA--AGCS-VIDLSGA 101 (340)
T ss_dssp -------------------HHHHHHHHHHHH--TTCE-EEETTCT
T ss_pred -------------------HHHHHHHHHHHH--CCCE-EEEeCCC
Confidence 123455666666 5654 6666655
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=98.14 E-value=3.8e-06 Score=71.48 Aligned_cols=104 Identities=16% Similarity=0.214 Sum_probs=61.5
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
...+|||.|+|+ |.+|..++..|+..|. +|.++++++++... +..... ....+.+.. ...+.++++|+|
T Consensus 6 ~~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~--~~~~~~i~~--~~~~a~~~aDiV 80 (326)
T 3vku_A 6 DKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDALP--FTSPKKIYS--AEYSDAKDADLV 80 (326)
T ss_dssp -CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--GSCCCEEEE--CCGGGGTTCSEE
T ss_pred cCCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhhh--hcCCcEEEE--CcHHHhcCCCEE
Confidence 445679999996 9999999999998876 89999987654321 111110 011222221 123568899999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|.+||.+. -......+.++.|+.-.+.+.+.+.+.
T Consensus 81 vi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~ 115 (326)
T 3vku_A 81 VITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp EECCCCC-------------------CHHHHHHHHHTT
T ss_pred EECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999642 123346677889999999999999984
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.13 E-value=1e-05 Score=69.67 Aligned_cols=94 Identities=17% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcccc---CceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFF---PGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~---~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|.||||++|+.+++.|.+++. +++++.+..+.......... .+ ....+.+.+ + +.++|+||.|++
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~~~--~~~g~~~~~~~~~~---~-~~~vDvV~~a~g 77 (345)
T 2ozp_A 4 KKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFVHP--NLRGRTNLKFVPPE---K-LEPADILVLALP 77 (345)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGTCG--GGTTTCCCBCBCGG---G-CCCCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHhCc--hhcCcccccccchh---H-hcCCCEEEEcCC
Confidence 46999999999999999999988764 88888765433322221100 01 112222322 3 478999999987
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
.. ....++..+.+ .+. ++|-+|+.
T Consensus 78 ~~-------------------~s~~~a~~~~~--aG~-~VId~Sa~ 101 (345)
T 2ozp_A 78 HG-------------------VFAREFDRYSA--LAP-VLVDLSAD 101 (345)
T ss_dssp TT-------------------HHHHTHHHHHT--TCS-EEEECSST
T ss_pred cH-------------------HHHHHHHHHHH--CCC-EEEEcCcc
Confidence 42 12344555555 454 57777764
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=98.13 E-value=5.1e-06 Score=69.92 Aligned_cols=70 Identities=17% Similarity=0.266 Sum_probs=52.2
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|..|||||.|+|+||.+|..+++.|.+.|++|++++|++++....... +++.. ...++++++|+||-+..
T Consensus 7 ~~~mmm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~aDvVi~av~ 76 (286)
T 3c24_A 7 NDVGPKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQGM-------GIPLT---DGDGWIDEADVVVLALP 76 (286)
T ss_dssp CSCCCCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHHT-------TCCCC---CSSGGGGTCSEEEECSC
T ss_pred ccccCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHhc-------CCCcC---CHHHHhcCCCEEEEcCC
Confidence 444568999999889999999999999999999999987654433221 12222 23456778999999864
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=98.11 E-value=8e-06 Score=69.17 Aligned_cols=100 Identities=17% Similarity=0.203 Sum_probs=70.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-C--CeEEEEecCCCcc---cccCCCCCccccCceeec--CCchhHhhhCCCCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-N--HQVRVLTRSRSKA---ELIFPGKKTRFFPGVMIA--EEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g--~~V~~~~r~~~~~---~~~~~~~~~~~~~~~d~~--d~~~~~~~~~~~d~vi~ 92 (325)
|||.|+||+|++|..++..|.++ + .++.++++++... ..+... . . ...+. ..+...+.++++|+||.
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~~G~a~Dl~~~-~---~-~~~v~~~~~~~~~~~~~~aDivii 75 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHI-P---T-AVKIKGFSGEDATPALEGADVVLI 75 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTHHHHHHHHHTS-C---S-SEEEEEECSSCCHHHHTTCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCchhHHHHhhCC-C---C-CceEEEecCCCcHHHhCCCCEEEE
Confidence 69999999999999999988775 4 5899999876211 111110 0 1 12222 11234567899999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+||.+.. ...+..+++..|+...+.+.+.+.+.
T Consensus 76 ~ag~~rk---pG~~R~dll~~N~~I~~~i~~~i~~~ 108 (312)
T 3hhp_A 76 SAGVARK---PGMDRSDLFNVNAGIVKNLVQQVAKT 108 (312)
T ss_dssp CCSCSCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9996522 23456788899999999999999884
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.11 E-value=5.9e-06 Score=64.58 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=54.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh--hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~--~~~~d~vi~~a~ 95 (325)
.++|+|+| .|.+|..+++.|.+. |++|++++|+++.......... .....|..+.+.+.++ ++++|+||.+.+
T Consensus 39 ~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~--~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~ 114 (183)
T 3c85_A 39 HAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRSEGR--NVISGDATDPDFWERILDTGHVKLVLLAMP 114 (183)
T ss_dssp TCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTC--CEEECCTTCHHHHHTBCSCCCCCEEEECCS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCC--CEEEcCCCCHHHHHhccCCCCCCEEEEeCC
Confidence 46899999 599999999999999 9999999998866544322111 0122455666777776 788999999865
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=5.5e-06 Score=70.55 Aligned_cols=105 Identities=14% Similarity=0.168 Sum_probs=69.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.+|||.|+|| |.+|..++..|+..|+ +|+++++++++........... ......+.-.+.. ++++++|+||.++
T Consensus 6 ~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~t~d~-~a~~~aDiVIiaa 83 (324)
T 3gvi_A 6 ARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFTGANDY-AAIEGADVVIVTA 83 (324)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESSG-GGGTTCSEEEECC
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEEEeCCH-HHHCCCCEEEEcc
Confidence 3579999997 9999999999999998 9999999886542110000000 0001222211223 6789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|.+.. ......+.+..|+...+.+.+.+.+.
T Consensus 84 g~p~k---~G~~R~dl~~~N~~i~~~i~~~i~~~ 114 (324)
T 3gvi_A 84 GVPRK---PGMSRDDLLGINLKVMEQVGAGIKKY 114 (324)
T ss_dssp SCCCC--------CHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCC---CCCCHHHHHHhhHHHHHHHHHHHHHH
Confidence 86522 22244567778999999999999884
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.08 E-value=4.7e-06 Score=67.18 Aligned_cols=73 Identities=18% Similarity=0.140 Sum_probs=55.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|||+|+|+ |.+|+++++.|.+.|++|++++++++....+..... ......|..+++.+.++ ++++|+||-+.+
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLK-ATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSS-SEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcC-CeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 68999996 999999999999999999999998876544321100 01334577788888776 689999998865
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=98.08 E-value=7.8e-06 Score=69.39 Aligned_cols=109 Identities=16% Similarity=0.129 Sum_probs=71.5
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC--CcccccCCC-CCcccc--CceeecCCchhHhhhCCCC
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPG-KKTRFF--PGVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~-~~~~~~--~~~d~~d~~~~~~~~~~~d 88 (325)
.|.+.++||.|+|+ |.+|..++..|+..|+ +|+++++++ ......... ...... ....+.-.+. .+.++++|
T Consensus 3 ~m~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t~d-~~a~~~aD 80 (315)
T 3tl2_A 3 AMTIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGTSD-YADTADSD 80 (315)
T ss_dssp -CCCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEESC-GGGGTTCS
T ss_pred CcccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEcCC-HHHhCCCC
Confidence 34444579999996 9999999999999999 999999983 222111000 000000 0111211112 35678999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+||.++|.+.. ......+++..|+...+.+.+.+.+.
T Consensus 81 vVIiaag~p~k---pg~~R~dl~~~N~~i~~~i~~~i~~~ 117 (315)
T 3tl2_A 81 VVVITAGIARK---PGMSRDDLVATNSKIMKSITRDIAKH 117 (315)
T ss_dssp EEEECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999997522 22345778889999999999999884
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=98.06 E-value=5.3e-06 Score=69.70 Aligned_cols=102 Identities=14% Similarity=0.138 Sum_probs=71.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|+ |.+|..++..|+..|+ +|.+++++++.... +..... ......++.-.++ .++++++|+||.++
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~-~~~~~~~i~~t~d-~~a~~~aDiVViaa 77 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGAD-YSLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-TTTCCCEEEEESC-GGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhh-hcCCCCEEEEeCC-HHHhCCCCEEEECC
Confidence 69999998 9999999999998887 99999998755321 000000 0001122331122 56789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|.+.. ......++...|+...+.+.+.+.+.
T Consensus 78 g~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~~ 108 (294)
T 1oju_A 78 GLARK---PGMTRLDLAHKNAGIIKDIAKKIVEN 108 (294)
T ss_dssp CCCCC---SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCC---CCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 86522 22345677889999999999999984
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.02 E-value=2.9e-06 Score=67.30 Aligned_cols=73 Identities=16% Similarity=-0.003 Sum_probs=51.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---h--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~--~~~d~vi~~a 94 (325)
.++|+|+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+....+ . .++|+||+++
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 115 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNSL 115 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEECC
T ss_pred CCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEeeCCcHHHHHHHHHHhCCCCCeEEEECC
Confidence 4689999999999999999999889999999997655433222111 112455555433322 2 2599999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 116 g 116 (198)
T 1pqw_A 116 A 116 (198)
T ss_dssp C
T ss_pred c
Confidence 6
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=98.00 E-value=2.2e-05 Score=64.99 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=47.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEE-ecCCCcc--cccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKA--ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~--~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.||||.|+|++|.+|+.+++.+.+. ++++.++ +|+.+.. ........ ... .+.-.+++.+++.++|+||+++
T Consensus 6 ~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~d~gel~g---~~~-gv~v~~dl~~ll~~~DVVIDfT 81 (272)
T 4f3y_A 6 SSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQDAGAFLG---KQT-GVALTDDIERVCAEADYLIDFT 81 (272)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTSBTTTTTT---CCC-SCBCBCCHHHHHHHCSEEEECS
T ss_pred cccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccccHHHHhC---CCC-CceecCCHHHHhcCCCEEEEcC
Confidence 3579999999999999999999876 5677774 6654321 11111000 011 2223456677777899999996
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 82 ~ 82 (272)
T 4f3y_A 82 L 82 (272)
T ss_dssp C
T ss_pred C
Confidence 3
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.00 E-value=7.3e-06 Score=73.29 Aligned_cols=77 Identities=19% Similarity=0.367 Sum_probs=53.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCce-----------eecCCchhHhhhCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~d~~~~~~~~~~~d 88 (325)
+|||.|+| .|++|..++..|++.|++|++++|++++...+.........++. .+.-.+++.++++++|
T Consensus 2 ~mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t~d~~ea~~~aD 80 (450)
T 3gg2_A 2 SLDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFGTEIEQAVPEAD 80 (450)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEESCHHHHGGGCS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEECCHHHHHhcCC
Confidence 47999999 59999999999999999999999988765443321100001111 1222345666788999
Q ss_pred EEEECCCCC
Q 020476 89 AVVNLAGTP 97 (325)
Q Consensus 89 ~vi~~a~~~ 97 (325)
+||-+.+.+
T Consensus 81 vViiaVptp 89 (450)
T 3gg2_A 81 IIFIAVGTP 89 (450)
T ss_dssp EEEECCCCC
T ss_pred EEEEEcCCC
Confidence 999998644
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.99 E-value=1.9e-05 Score=67.29 Aligned_cols=103 Identities=16% Similarity=0.167 Sum_probs=71.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+|||.|+|+ |.+|..++..|+..+. +|.++++++++... +..... .......+.-.+. .+.++++|+||.++
T Consensus 5 ~~kI~iiGa-G~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~-~~~~~~~v~~t~d-~~a~~~aDvVIi~a 81 (321)
T 3p7m_A 5 RKKITLVGA-GNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCP-IEGVDFKVRGTND-YKDLENSDVVIVTA 81 (321)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHH-HHTCCCCEEEESC-GGGGTTCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhh-hcCCCcEEEEcCC-HHHHCCCCEEEEcC
Confidence 579999995 9999999999999887 99999998865421 111100 0001122321112 36789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|.+.. ......+.+..|+...+.+.+.+.+.
T Consensus 82 g~p~k---~G~~R~dl~~~N~~i~~~i~~~i~~~ 112 (321)
T 3p7m_A 82 GVPRK---PGMSRDDLLGINIKVMQTVGEGIKHN 112 (321)
T ss_dssp SCCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCC---CCCCHHHHHHHhHHHHHHHHHHHHHH
Confidence 86522 22345677889999999999999884
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=97.97 E-value=2.6e-05 Score=67.35 Aligned_cols=70 Identities=26% Similarity=0.376 Sum_probs=42.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|++||.|+||||++|..|++.|.++++ ++..+..+.+..+..... .....+.+.+ .+.++++|+||.|++
T Consensus 1 m~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~~~~-----~~~~~~~~~~--~~~~~~~Dvvf~a~~ 73 (366)
T 3pwk_A 1 MGYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----DQDITIEETT--ETAFEGVDIALFSAG 73 (366)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEEEET-----TEEEEEEECC--TTTTTTCSEEEECSC
T ss_pred CCcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcceec-----CCCceEeeCC--HHHhcCCCEEEECCC
Confidence 357999999999999999999988766 345444322222221100 0011222222 123578999999986
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=3.1e-05 Score=66.37 Aligned_cols=110 Identities=14% Similarity=0.134 Sum_probs=71.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCC-CC-cc-ccCceeecCCchhHhhhCCCCEEEEC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG-KK-TR-FFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~-~~-~~-~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
.++|||.|+|| |.+|..++..|+..|+ +|.+++++++........ .. .. ......+.-..++.+.++++|+||.+
T Consensus 7 ~~~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~ea~~~aDiVi~a 85 (331)
T 1pzg_A 7 QRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVT 85 (331)
T ss_dssp SCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEEC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEeCCHHHHhCCCCEEEEc
Confidence 34579999997 9999999999999998 999999987654331100 00 00 00111222224566678999999999
Q ss_pred CCCCCCCCCCh--hhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 94 AGTPIGTRWSS--EIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 94 a~~~~~~~~~~--~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
++.+....... ....+....|+...+.+.+.+.+.
T Consensus 86 ~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~ 122 (331)
T 1pzg_A 86 AGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKY 122 (331)
T ss_dssp CSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 98653221100 012344667888888888888873
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.95 E-value=1.4e-05 Score=69.25 Aligned_cols=36 Identities=36% Similarity=0.543 Sum_probs=30.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~ 54 (325)
|++||.|.||+|++|+.+++.|.+++ .+|+++.++.
T Consensus 7 M~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~ 43 (354)
T 1ys4_A 7 MKIKVGVLGATGSVGQRFVQLLADHPMFELTALAASE 43 (354)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECT
T ss_pred ccceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEccc
Confidence 44699999999999999999998775 5888887643
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.94 E-value=1.8e-05 Score=67.79 Aligned_cols=101 Identities=20% Similarity=0.193 Sum_probs=69.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCcc--c----ccCCCCCccccCceeecCCchhHhhhCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKA--E----LIFPGKKTRFFPGVMIAEEPQWRDCIQGS 87 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~--~----~~~~~~~~~~~~~~d~~d~~~~~~~~~~~ 87 (325)
.||.|+||+|.||+.|+-.|.+... ++.+++..+... + .+.... ......+.-.+...+.++++
T Consensus 25 vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~~---~~~~~~~~~~~~~~~a~~~a 101 (345)
T 4h7p_A 25 VKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDCA---FPLLDKVVVTADPRVAFDGV 101 (345)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTT---CTTEEEEEEESCHHHHTTTC
T ss_pred CEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhcC---ccCCCcEEEcCChHHHhCCC
Confidence 3999999999999999988876532 688888755321 1 011100 01111222233456788999
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
|+||-+||.+.. ......++++.|..-.+.+.+.+.+
T Consensus 102 dvVvi~aG~prk---pGmtR~DLl~~Na~I~~~~~~~i~~ 138 (345)
T 4h7p_A 102 AIAIMCGAFPRK---AGMERKDLLEMNARIFKEQGEAIAA 138 (345)
T ss_dssp SEEEECCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCCCCCC---CCCCHHHHHHHhHHHHHHHHHHHHh
Confidence 999999997622 3345678899999999999999887
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.92 E-value=6e-06 Score=61.52 Aligned_cols=74 Identities=15% Similarity=0.058 Sum_probs=55.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
++++|+|+|+ |.+|..+++.|.+.|++|++++++++.......... .....|..+++.+.++ ++++|+||-+.+
T Consensus 6 ~~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~--~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 6 ICNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRERGV--RAVLGNAANEEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CCSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC--EEEESCTTSHHHHHHTTGGGCSEEEECCS
T ss_pred CCCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC--CEEECCCCCHHHHHhcCcccCCEEEEECC
Confidence 3468999995 999999999999999999999999876544332211 1233566677777664 568999998875
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.89 E-value=2.7e-05 Score=66.01 Aligned_cols=103 Identities=14% Similarity=0.138 Sum_probs=68.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCC-ccc--cCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK-TRF--FPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~--~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|+ |.+|..++..|+..|. +|+++++++.+......... ... .....+.-. ...+.++++|+||.+||
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~~a~~~aDvVii~ag 78 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDYGPTEDSDVCIITAG 78 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSSGGGTTCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCHHHhCCCCEEEECCC
Confidence 69999996 9999999999998886 99999998865321100000 000 001222211 22467889999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ......++...|+.-.+.+.+.+.+.
T Consensus 79 ~~~k---pG~~R~dl~~~N~~i~~~i~~~i~~~ 108 (314)
T 3nep_X 79 LPRS---PGMSRDDLLAKNTEIVGGVTEQFVEG 108 (314)
T ss_dssp C----------CHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCCC---CCCCHHHHHHhhHHHHHHHHHHHHHh
Confidence 6521 22345678889999999999999984
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=1.7e-05 Score=63.72 Aligned_cols=66 Identities=18% Similarity=0.303 Sum_probs=50.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++|||.|+| +|.+|+.+++.|.+.|++|++++|++++....... ++... .+.++++++|+||.+..
T Consensus 27 ~~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~~-------g~~~~---~~~~~~~~~DvVi~av~ 92 (215)
T 2vns_A 27 EAPKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFPS-------AAQVT---FQEEAVSSPEVIFVAVF 92 (215)
T ss_dssp --CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSBT-------TSEEE---EHHHHTTSCSEEEECSC
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCcee---cHHHHHhCCCEEEECCC
Confidence 567999999 89999999999999999999999987654443321 12222 45667789999999875
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=3.4e-05 Score=64.64 Aligned_cols=110 Identities=15% Similarity=0.177 Sum_probs=71.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|| |.||+.++-.|+.++ .++.+++..+..... +..... .......+.-.+.. +.++++|+||-.|
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~~~~~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGTCCCEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCCCCCeEecCCCH-HHhCCCCEEEEec
Confidence 79999995 999999999888776 489999986533211 100000 00001111111122 4678999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
|.+.. ...+..+.+..|..-.+.+.+.+.+. ...-++.+
T Consensus 78 G~prk---pGmtR~dLl~~Na~I~~~i~~~i~~~--~p~aivlv 116 (294)
T 2x0j_A 78 GLARK---PGMTRLDLAHKNAGIIKDIAKKIVEN--APESKILV 116 (294)
T ss_dssp CCCCC---SSSCHHHHHHHHHHHHHHHHHHHHTT--STTCEEEE
T ss_pred CCCCC---CCCchHHHHHHHHHHHHHHHHHHHhc--CCceEEEE
Confidence 97632 33457788999999999999999984 33444433
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.86 E-value=3.2e-06 Score=63.38 Aligned_cols=71 Identities=8% Similarity=0.101 Sum_probs=54.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|+|+|+ |.+|+.+++.|.+.|++|++++|++++...+... .+++....+.+.++++++|+||.+.+..
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~------~~~~~~~~~~~~~~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEK------YEYEYVLINDIDSLIKNNDVIITATSSK 91 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHH------HTCEEEECSCHHHHHHTCSEEEECSCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHH------hCCceEeecCHHHHhcCCCEEEEeCCCC
Confidence 579999995 9999999999999999999999987665433221 1134445566777888999999998753
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.85 E-value=2.6e-05 Score=67.50 Aligned_cols=73 Identities=22% Similarity=0.180 Sum_probs=52.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~~a 94 (325)
..+|||+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+++.+.++ ++|+||+++
T Consensus 170 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 246 (347)
T 2hcy_A 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRSIGG---EVFIDFTKEKDIVGAVLKATDGGAHGVINVS 246 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHTTC---CEEEETTTCSCHHHHHHHHHTSCEEEEEECS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHHcCC---ceEEecCccHhHHHHHHHHhCCCCCEEEECC
Confidence 3589999999999999999999999999999998766433222111 11245554444444332 699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 247 g 247 (347)
T 2hcy_A 247 V 247 (347)
T ss_dssp S
T ss_pred C
Confidence 7
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=97.83 E-value=4.3e-05 Score=65.52 Aligned_cols=93 Identities=20% Similarity=0.225 Sum_probs=55.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC---CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN---HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g---~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
||||.|.||+|++|+.+++.|.+++ .+++++....+......-. ...+.+.+.+. +.++++|+||.|.+.
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~~~~~-----~~~i~~~~~~~--~~~~~vDvVf~a~g~ 75 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKTYRFN-----GKTVRVQNVEE--FDWSQVHIALFSAGG 75 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCEEEET-----TEEEEEEEGGG--CCGGGCSEEEECSCH
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCceeec-----CceeEEecCCh--HHhcCCCEEEECCCc
Confidence 5799999999999999999999874 4677776322211111100 01122222211 233689999999862
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
..+...+..+.+ .+. ++|-.|+.
T Consensus 76 -------------------~~s~~~a~~~~~--~G~-~vId~s~~ 98 (336)
T 2r00_A 76 -------------------ELSAKWAPIAAE--AGV-VVIDNTSH 98 (336)
T ss_dssp -------------------HHHHHHHHHHHH--TTC-EEEECSST
T ss_pred -------------------hHHHHHHHHHHH--cCC-EEEEcCCc
Confidence 123345555656 454 56666665
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.83 E-value=1.9e-05 Score=68.43 Aligned_cols=73 Identities=18% Similarity=0.246 Sum_probs=45.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCc---eeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPG---VMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~---~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|.||+|++|+.+++.|.+++. +++++.+..+.......... .+.+ .|+.-.+ .+.++++|+||.|++
T Consensus 16 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~--~~~~~v~~dl~~~~--~~~~~~vDvVf~atp 91 (359)
T 1xyg_A 16 DIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFP--HLRAQKLPTLVSVK--DADFSTVDAVFCCLP 91 (359)
T ss_dssp CEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCG--GGTTSCCCCCBCGG--GCCGGGCSEEEECCC
T ss_pred CcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCc--hhcCcccccceecc--hhHhcCCCEEEEcCC
Confidence 35999999999999999999998764 88888765433221110000 0111 1222111 344568999999986
Q ss_pred C
Q 020476 96 T 96 (325)
Q Consensus 96 ~ 96 (325)
.
T Consensus 92 ~ 92 (359)
T 1xyg_A 92 H 92 (359)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=3.3e-05 Score=65.81 Aligned_cols=112 Identities=14% Similarity=0.152 Sum_probs=73.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCccccc----CCCCCcccc-CceeecCCchhHhhhCCCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELI----FPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~----~~~~~~~~~-~~~d~~d~~~~~~~~~~~d~vi 91 (325)
++|||.|+|| |.+|..++..|+..+ .+|.++++++++.... ..... .. ..+.+.. + -.++++++|+||
T Consensus 5 ~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~--~~~~~~~v~~-~-~~~a~~~aDvVv 79 (317)
T 3d0o_A 5 KGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHATP--YSPTTVRVKA-G-EYSDCHDADLVV 79 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHHGG--GSSSCCEEEE-C-CGGGGTTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhhhh--hcCCCeEEEe-C-CHHHhCCCCEEE
Confidence 4579999998 999999999998887 4899999875432210 00000 01 1223322 2 256689999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
.+++.+... .....+....|+...+.+.+.+.+. ...-++.+.|
T Consensus 80 i~ag~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~--~p~a~viv~t 123 (317)
T 3d0o_A 80 ICAGAAQKP---GETRLDLVSKNLKIFKSIVGEVMAS--KFDGIFLVAT 123 (317)
T ss_dssp ECCCCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHT--TCCSEEEECS
T ss_pred ECCCCCCCC---CCcHHHHHHHHHHHHHHHHHHHHHh--CCCcEEEEec
Confidence 999875221 2334567788999999999999984 3334444433
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=97.83 E-value=3e-05 Score=66.82 Aligned_cols=78 Identities=10% Similarity=-0.037 Sum_probs=57.2
Q ss_pred CCeEEEECCCchHHHHHHHHHH-hCCCeEEEEecCCCcccccC----------------CCCCccccCceeecCCchhHh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQ-ADNHQVRVLTRSRSKAELIF----------------PGKKTRFFPGVMIAEEPQWRD 82 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~~~~----------------~~~~~~~~~~~d~~d~~~~~~ 82 (325)
.|++|||||+..+|.+.+..|+ +.|..|+++.+..+...... ..+.......+|+.+.+.+.+
T Consensus 50 pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~G~~a~~i~~Dv~d~e~i~~ 129 (401)
T 4ggo_A 50 PKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKREGLYSVTIDGDAFSDEIKAQ 129 (401)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHH
T ss_pred CCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHcCCCceeEeCCCCCHHHHHH
Confidence 5789999999999999998887 56889999988665432211 111112245689998887776
Q ss_pred hhC-------CCCEEEECCCCC
Q 020476 83 CIQ-------GSTAVVNLAGTP 97 (325)
Q Consensus 83 ~~~-------~~d~vi~~a~~~ 97 (325)
+++ ++|++||+++.+
T Consensus 130 vi~~i~~~~G~IDiLVhS~A~~ 151 (401)
T 4ggo_A 130 VIEEAKKKGIKFDLIVYSLASP 151 (401)
T ss_dssp HHHHHHHTTCCEEEEEECCCCS
T ss_pred HHHHHHHhcCCCCEEEEecccc
Confidence 653 689999999965
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=7.7e-05 Score=63.39 Aligned_cols=103 Identities=17% Similarity=0.201 Sum_probs=68.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|+ |.+|..++..|++. |++|++++++++....... ..........++...+++.+ ++++|+||-+++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~~~-l~~aDvViiav~ 78 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSNDYAD-TANSDIVIITAG 78 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESCGGG-GTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEECCCHHH-HCCCCEEEEeCC
Confidence 69999998 99999999999885 7999999998765432210 00000001112222233444 789999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+.. ......++...|+.....+.+.+.+.
T Consensus 79 ~p~~---~g~~r~dl~~~n~~i~~~i~~~i~~~ 108 (310)
T 1guz_A 79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMKH 108 (310)
T ss_dssp CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5421 11224567778888898999888873
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.79 E-value=2.3e-05 Score=66.83 Aligned_cols=76 Identities=17% Similarity=0.215 Sum_probs=48.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc------cCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF------FPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~------~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
+||||.|+|+ |.+|..++..|.+.|++|++++|+++............. ...++..+.+.+.+.++++|+||-
T Consensus 2 ~~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 2 NAMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDHQNEQVDLIIA 80 (316)
T ss_dssp --CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCTTSCCCSEEEE
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcccCCCCCEEEE
Confidence 4579999995 999999999999999999999998755433221110000 001122233333334458999999
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
+..
T Consensus 81 ~v~ 83 (316)
T 2ew2_A 81 LTK 83 (316)
T ss_dssp CSC
T ss_pred Eec
Confidence 864
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.78 E-value=6.2e-06 Score=66.53 Aligned_cols=72 Identities=18% Similarity=0.163 Sum_probs=50.5
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEE-EecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
.+.++||||.|+| +|.+|..+++.|.+.|++|++ .+|++++...+.... ++... ....+.++++|+||-+
T Consensus 18 ~~~m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~~~------g~~~~--~~~~~~~~~aDvVila 88 (220)
T 4huj_A 18 LYFQSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTDRF------GASVK--AVELKDALQADVVILA 88 (220)
T ss_dssp TTGGGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHHHH------TTTEE--ECCHHHHTTSSEEEEE
T ss_pred hhhhcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHHHh------CCCcc--cChHHHHhcCCEEEEe
Confidence 3455678999999 799999999999999999999 888776654432210 11111 1223446789999988
Q ss_pred CC
Q 020476 94 AG 95 (325)
Q Consensus 94 a~ 95 (325)
..
T Consensus 89 vp 90 (220)
T 4huj_A 89 VP 90 (220)
T ss_dssp SC
T ss_pred CC
Confidence 63
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.78 E-value=1.3e-05 Score=69.99 Aligned_cols=75 Identities=15% Similarity=0.143 Sum_probs=55.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|+|+|+ |.+|..+++.|...|.+|++++|++++......... ....+|..+.+.+.++++++|+||++++..
T Consensus 166 ~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g--~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 166 PASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFG--GRVITLTATEANIKKSVQHADLLIGAVLVP 240 (369)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--TSEEEEECCHHHHHHHHHHCSEEEECCC--
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcC--ceEEEecCCHHHHHHHHhCCCEEEECCCCC
Confidence 469999998 999999999999999999999998765432221000 012245567778888888999999999853
|
| >4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00018 Score=64.03 Aligned_cols=76 Identities=21% Similarity=0.364 Sum_probs=55.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCcee-----------ecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM-----------IAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d-----------~~d~~~~~~~~~~~d~ 89 (325)
.+|.|+| .|++|..++..|++.||+|++++|++++...+.........++++ +.-.+++.++++++|+
T Consensus 9 ~~~~vIG-lG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~ea~~~aDv 87 (446)
T 4a7p_A 9 VRIAMIG-TGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAEGVKDADA 87 (446)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHTTCSE
T ss_pred eEEEEEc-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHHHHhcCCE
Confidence 4899999 799999999999999999999999998876665432111111111 1122456677889999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
||-|.+.+
T Consensus 88 vii~Vptp 95 (446)
T 4a7p_A 88 VFIAVGTP 95 (446)
T ss_dssp EEECCCCC
T ss_pred EEEEcCCC
Confidence 99997643
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=2.1e-05 Score=67.64 Aligned_cols=73 Identities=16% Similarity=0.087 Sum_probs=51.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a 94 (325)
.++|+|+||+|.||..+++.+...|.+|++++|++++......... ...+|..+.+.+.+.+ .++|+||+++
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 222 (333)
T 1v3u_A 146 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDNV 222 (333)
T ss_dssp SCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---cEEEecCCHHHHHHHHHHHhCCCCeEEEECC
Confidence 4589999999999999999999999999999987655433321111 1224555533333332 2699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 223 g 223 (333)
T 1v3u_A 223 G 223 (333)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00016 Score=60.09 Aligned_cols=73 Identities=15% Similarity=0.188 Sum_probs=46.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEE-ecCCCc-c-cccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSK-A-ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~-~-~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|.|++|.+|+.+++.+.+. +.++.++ +|+.+. . ........ .....+.-.+++.+++.++|+||.+..
T Consensus 21 ~irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~d~gel~G---~~~~gv~v~~dl~~ll~~aDVvIDFT~ 97 (288)
T 3ijp_A 21 SMRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDKDASILIG---SDFLGVRITDDPESAFSNTEGILDFSQ 97 (288)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTSBGGGGTT---CSCCSCBCBSCHHHHTTSCSEEEECSC
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccccchHHhhc---cCcCCceeeCCHHHHhcCCCEEEEcCC
Confidence 459999999999999999998865 5677766 454322 1 10000000 111222333567777889999999863
|
| >2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00016 Score=61.14 Aligned_cols=55 Identities=15% Similarity=0.220 Sum_probs=45.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+++||.|+||.|.+|..+++.|.+.|++|++++|++.. ...++++++|+||-+..
T Consensus 20 ~~~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~~~----------------------~~~~~~~~aDvVilavp 74 (298)
T 2pv7_A 20 DIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA----------------------VAESILANADVVIVSVP 74 (298)
T ss_dssp TCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG----------------------GHHHHHTTCSEEEECSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCccc----------------------CHHHHhcCCCEEEEeCC
Confidence 45699999999999999999999999999999886531 24456678888888764
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=6.5e-05 Score=64.16 Aligned_cols=105 Identities=16% Similarity=0.220 Sum_probs=69.8
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCE
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
....+|||.|+|| |.+|..++..|+..+. +|.++++++++... +..... ....+.+.. + -.+.++++|+
T Consensus 5 ~~~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~~--~~~~~~i~~-~-~~~a~~~aDv 79 (326)
T 2zqz_A 5 TDKDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNALP--FTSPKKIYS-A-EYSDAKDADL 79 (326)
T ss_dssp -CCCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTGG--GSCCCEEEE-C-CGGGGGGCSE
T ss_pred ccCCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHHH--hcCCeEEEE-C-CHHHhCCCCE
Confidence 3445689999998 9999999999988775 89999986544322 111100 012233332 2 2456889999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||..++.+.. ......++...|+...+.+.+.+.+.
T Consensus 80 Vii~ag~~~k---~g~~R~dl~~~n~~i~~~i~~~i~~~ 115 (326)
T 2zqz_A 80 VVITAGAPQK---PGETRLDLVNKNLKILKSIVDPIVDS 115 (326)
T ss_dssp EEECCCCC--------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999986522 12334567788999999999998884
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.72 E-value=9.2e-05 Score=63.24 Aligned_cols=102 Identities=17% Similarity=0.281 Sum_probs=66.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccc--cc--CCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAE--LI--FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~--~~--~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
++|||.|+|+ |.+|..++..|++.|+ +|++++|++.... .. ..... ......+...+.. +.++++|+||-
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~-~~~~~aD~Vii 81 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FYPTVSIDGSDDP-EICRDADMVVI 81 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GSTTCEEEEESCG-GGGTTCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHhhhh--hcCCeEEEeCCCH-HHhCCCCEEEE
Confidence 4579999997 9999999999999998 9999999864432 11 11000 0011222211122 45689999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+++.+.. ......+....|+.....+++.+++
T Consensus 82 ~v~~~~~---~g~~r~~~~~~n~~~~~~~~~~i~~ 113 (319)
T 1lld_A 82 TAGPRQK---PGQSRLELVGATVNILKAIMPNLVK 113 (319)
T ss_dssp CCCCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCC---CCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9975421 1223456677888888888888876
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.71 E-value=8.3e-05 Score=62.78 Aligned_cols=65 Identities=14% Similarity=0.100 Sum_probs=50.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+| .|.+|..+++.|++.|++|++++|++++....... ++. -.+++.++++ +|+||-+..
T Consensus 15 ~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~--~~~~~~~~~~-aDvvi~~vp 79 (296)
T 3qha_A 15 QLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAEA-------GAT--LADSVADVAA-ADLIHITVL 79 (296)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHHT-------TCE--ECSSHHHHTT-SSEEEECCS
T ss_pred CCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCE--EcCCHHHHHh-CCEEEEECC
Confidence 46999999 69999999999999999999999998775544322 122 2345667778 999998864
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.71 E-value=3.4e-05 Score=64.29 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=51.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++++|+|+ |.+|+.+++.|++.|.+|++++|+.++...+...... ...++..+.+.+.+ .++|+||++++..
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~--~~~~~~~~~~~~~~--~~~DivVn~t~~~ 191 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAH--TGSIQALSMDELEG--HEFDLIINATSSG 191 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGG--GSSEEECCSGGGTT--CCCSEEEECCSCG
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhc--cCCeeEecHHHhcc--CCCCEEEECCCCC
Confidence 3579999998 7899999999999999999999987654433221100 11244444444433 5899999999853
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=4.3e-05 Score=68.26 Aligned_cols=76 Identities=28% Similarity=0.417 Sum_probs=52.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| +|++|..++..|++.|++|++++|++++...+.........+. ..+.-.+++.++++++|+
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~~~~~~aDv 79 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHHHHhccCCE
Confidence 6899999 7999999999999999999999998776544433210000000 112223345566789999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
||-|...+
T Consensus 80 viiaVptp 87 (436)
T 1mv8_A 80 SFICVGTP 87 (436)
T ss_dssp EEECCCCC
T ss_pred EEEEcCCC
Confidence 99998643
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=97.70 E-value=4.2e-05 Score=62.22 Aligned_cols=71 Identities=11% Similarity=0.099 Sum_probs=54.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
.++|+|+|+ |.+|+.+++.|.+.|+ |++++|+++......... .....|..+++.+.++ ++++|.||.+.+
T Consensus 9 ~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~~~~---~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 9 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLRSGA---NFVHGDPTRVSDLEKANVRGARAVIVDLE 80 (234)
T ss_dssp -CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHHTTC---EEEESCTTCHHHHHHTTCTTCSEEEECCS
T ss_pred CCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHhcCC---eEEEcCCCCHHHHHhcCcchhcEEEEcCC
Confidence 468999996 9999999999999999 999999877644332111 1345677788888776 789999998865
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=62.70 Aligned_cols=35 Identities=26% Similarity=0.465 Sum_probs=29.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~ 54 (325)
|+||.|+||||++|..+++.|.++ ++++..+.++.
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~ 39 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSA 39 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEET
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecC
Confidence 479999999999999999999885 46888876554
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.68 E-value=4e-05 Score=65.36 Aligned_cols=103 Identities=14% Similarity=0.208 Sum_probs=70.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
..+||.|+|+ |.+|..++..|+..|. +|.+++++..+... +..... ......+....+.. .++++|+||.
T Consensus 18 ~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~~~d~~-~~~~aDiVvi 93 (331)
T 4aj2_A 18 PQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGSL--FLKTPKIVSSKDYS-VTANSKLVII 93 (331)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--GCSCCEEEECSSGG-GGTTEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhhh--ccCCCeEEEcCCHH-HhCCCCEEEE
Confidence 4579999997 9999999999999886 89999987643322 111100 00011222122343 5899999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+||.+.. ......+.+..|+.-.+.+.+.+.+.
T Consensus 94 ~aG~~~k---pG~tR~dL~~~N~~I~~~i~~~i~~~ 126 (331)
T 4aj2_A 94 TAGARQQ---EGESRLNLVQRNVNIFKFIIPNVVKY 126 (331)
T ss_dssp CCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCC---CCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9997522 22345678889999999999999884
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00011 Score=62.31 Aligned_cols=100 Identities=19% Similarity=0.277 Sum_probs=62.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|| |.+|..++..|+..|+ +|+++++++.+... +..... ......+.. +.. +.++++|+||.++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~--~~~~~~i~~-~~~-~a~~~aDvVIi~~ 75 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAHAAP--VSHGTRVWH-GGH-SELADAQVVILTA 75 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTTSCC--TTSCCEEEE-ECG-GGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhhhhh--hcCCeEEEE-CCH-HHhCCCCEEEEcC
Confidence 69999998 9999999999999998 99999998653221 111100 011222221 223 5688999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+.. ......+....|+...+.+++.+.+.
T Consensus 76 ~~~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (304)
T 2v6b_A 76 GANQK---PGESRLDLLEKNADIFRELVPQITRA 106 (304)
T ss_dssp ---------------CHHHHHHHHHHHHHHHHHH
T ss_pred CCCCC---CCCcHHHHHHhHHHHHHHHHHHHHHh
Confidence 75421 12233456678888888998888873
|
| >3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.66 E-value=7e-05 Score=64.83 Aligned_cols=78 Identities=13% Similarity=0.273 Sum_probs=51.7
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCceee----cCCchhHhhhCCCCEE
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVMI----AEEPQWRDCIQGSTAV 90 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~----~d~~~~~~~~~~~d~v 90 (325)
|.+++|||.|+| .|.+|..++..|++.|++|++++|+++............ ..++..+ .-.+++.++++++|+|
T Consensus 25 m~~~~mkI~VIG-aG~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvV 103 (356)
T 3k96_A 25 MEPFKHPIAILG-AGSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDLKASLEGVTDI 103 (356)
T ss_dssp --CCCSCEEEEC-CSHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCHHHHHTTCCEE
T ss_pred ccccCCeEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCHHHHHhcCCEE
Confidence 445568999999 599999999999999999999999866543322111000 0112221 1123566778899999
Q ss_pred EECC
Q 020476 91 VNLA 94 (325)
Q Consensus 91 i~~a 94 (325)
|-+.
T Consensus 104 ilaV 107 (356)
T 3k96_A 104 LIVV 107 (356)
T ss_dssp EECC
T ss_pred EECC
Confidence 9885
|
| >3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.0002 Score=64.20 Aligned_cols=75 Identities=19% Similarity=0.160 Sum_probs=52.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CC-eEEEEecCCC----cccccCCCCCcc--cc-------------CceeecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NH-QVRVLTRSRS----KAELIFPGKKTR--FF-------------PGVMIAEE 77 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~-~V~~~~r~~~----~~~~~~~~~~~~--~~-------------~~~d~~d~ 77 (325)
.+|||.|+| .|++|..++..|++. |+ +|++++|+++ +...+....... .. ..+...+
T Consensus 17 ~~mkIaVIG-lG~mG~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~tt- 94 (478)
T 3g79_A 17 PIKKIGVLG-MGYVGIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFECTP- 94 (478)
T ss_dssp SCCEEEEEC-CSTTHHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEES-
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEEeC-
Confidence 357999999 699999999999999 99 9999999998 555444321100 00 0112211
Q ss_pred chhHhhhCCCCEEEECCCCC
Q 020476 78 PQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 78 ~~~~~~~~~~d~vi~~a~~~ 97 (325)
. .++++++|+||-+.+.+
T Consensus 95 -d-~ea~~~aDvViiaVptp 112 (478)
T 3g79_A 95 -D-FSRISELDAVTLAIQTP 112 (478)
T ss_dssp -C-GGGGGGCSEEEECCCCC
T ss_pred -c-HHHHhcCCEEEEecCCc
Confidence 2 35678899999998644
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=5.5e-05 Score=68.16 Aligned_cols=77 Identities=19% Similarity=0.277 Sum_probs=53.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCce-----------eecCCchhHhhhCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~d~~~~~~~~~~~d 88 (325)
.|||.|+| .|++|..++..|++.|++|++++|++++...+.........+++ .+.-.+++.++++++|
T Consensus 8 ~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~aD 86 (478)
T 2y0c_A 8 SMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFSTDIEAAVAHGD 86 (478)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEECCHHHHHHHCS
T ss_pred CceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEECCHHHHhhcCC
Confidence 47999999 69999999999999999999999987765554432110001111 1111224445677899
Q ss_pred EEEECCCCC
Q 020476 89 AVVNLAGTP 97 (325)
Q Consensus 89 ~vi~~a~~~ 97 (325)
+||-|...+
T Consensus 87 vviiaVptp 95 (478)
T 2y0c_A 87 VQFIAVGTP 95 (478)
T ss_dssp EEEECCCCC
T ss_pred EEEEEeCCC
Confidence 999997643
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00012 Score=62.69 Aligned_cols=105 Identities=16% Similarity=0.205 Sum_probs=67.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCC---CCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~---~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
++|||.|+|| |.+|..++..|+..|+ +|++++++++........ ..........+.-..++ +.++++|+||-++
T Consensus 13 ~~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 13 MRKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEEEECCCH-HHHCCCCEEEEcC
Confidence 3469999997 9999999999999998 999999987654321100 00000001122221334 6789999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+...... ..+....|+...+.+.+.+.+.
T Consensus 91 g~p~k~g~t---r~dl~~~n~~i~~~i~~~i~~~ 121 (328)
T 2hjr_A 91 GVPRKPNMT---RSDLLTVNAKIVGSVAENVGKY 121 (328)
T ss_dssp SCCCCTTCC---SGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCc---hhhHHhhhHHHHHHHHHHHHHH
Confidence 865321111 1234456778888888888773
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=9.3e-05 Score=63.11 Aligned_cols=107 Identities=12% Similarity=0.176 Sum_probs=67.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+|| |.+|..++..|+..|+ +|.++++++++...... ...........+....++ +.++++|+||.+++
T Consensus 4 ~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~t~d~-~al~~aD~Vi~a~g 81 (322)
T 1t2d_A 4 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY-DDLAGADVVIVTAG 81 (322)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG-GGGTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 469999998 9999999999999998 99999988765432110 000000011222222345 67899999999998
Q ss_pred CCCCCCCC--hhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWS--SEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~--~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+...... +....+....|+...+.+.+.+.+.
T Consensus 82 ~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~ 116 (322)
T 1t2d_A 82 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKN 116 (322)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 65221111 0002344557777888888888774
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=7.2e-05 Score=64.39 Aligned_cols=73 Identities=16% Similarity=0.096 Sum_probs=52.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc-CCCCCccccCceeecCCchhHhhh----CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI-FPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~~~d~~d~~~~~~~~----~~~d~vi~~a 94 (325)
..+|||+||+|-+|..+++.+...|.+|++++|++++.... ..... ...+|..+.+....+. .++|+||+++
T Consensus 150 g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 226 (336)
T 4b7c_A 150 GETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGF---DGAIDYKNEDLAAGLKRECPKGIDVFFDNV 226 (336)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCC---SEEEETTTSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---CEEEECCCHHHHHHHHHhcCCCceEEEECC
Confidence 45899999999999999999999999999999987665444 22221 1124444544333322 3699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 227 g 227 (336)
T 4b7c_A 227 G 227 (336)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans} | Back alignment and structure |
|---|
Probab=97.61 E-value=3.4e-05 Score=69.70 Aligned_cols=80 Identities=16% Similarity=0.202 Sum_probs=53.6
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCce----------eecCCchhHhhh
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGV----------MIAEEPQWRDCI 84 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~----------d~~d~~~~~~~~ 84 (325)
++++|||.|+| .|++|..++..|++. |++|++++|++++...+.........+.+ .+.-.+++.+++
T Consensus 6 ~~~~mkI~VIG-~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~~~~~~~~~l~~t~~~~~~~ 84 (481)
T 2o3j_A 6 FGKVSKVVCVG-AGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAEWNSDKLPIYEPGLDEIVFAARGRNLFFSSDIPKAI 84 (481)
T ss_dssp SCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHHTSSSCSSCCTTHHHHHHHHBTTTEEEESCHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhhcCCEEEECCHHHHh
Confidence 34568999999 699999999999998 79999999988776555432110000110 011112344566
Q ss_pred CCCCEEEECCCCC
Q 020476 85 QGSTAVVNLAGTP 97 (325)
Q Consensus 85 ~~~d~vi~~a~~~ 97 (325)
+++|+||-|.+.+
T Consensus 85 ~~aDvvii~Vptp 97 (481)
T 2o3j_A 85 AEADLIFISVNTP 97 (481)
T ss_dssp HHCSEEEECCCCC
T ss_pred hcCCEEEEecCCc
Confidence 7899999997644
|
| >3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00013 Score=59.24 Aligned_cols=35 Identities=14% Similarity=0.348 Sum_probs=29.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEE-EecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~ 55 (325)
||||.|+|+ |.+|+.+++.+.+.++++.+ ++|+..
T Consensus 3 MmkI~ViGa-GrMG~~i~~~l~~~~~eLva~~d~~~~ 38 (243)
T 3qy9_A 3 SMKILLIGY-GAMNQRVARLAEEKGHEIVGVIENTPK 38 (243)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEECSSCC
T ss_pred ceEEEEECc-CHHHHHHHHHHHhCCCEEEEEEecCcc
Confidence 689999999 99999999999988777766 455543
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.60 E-value=2.1e-05 Score=67.45 Aligned_cols=73 Identities=15% Similarity=0.069 Sum_probs=51.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---h--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~--~~~d~vi~~a 94 (325)
..+|+|+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+...++ . .++|+||+++
T Consensus 141 g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~~ 217 (327)
T 1qor_A 141 DEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDSV 217 (327)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEECS
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCccHHHHHHHHhCCCCceEEEECC
Confidence 3589999999999999999999999999999997654333222111 112455555443333 2 2689999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 218 g 218 (327)
T 1qor_A 218 G 218 (327)
T ss_dssp C
T ss_pred c
Confidence 7
|
| >3pzr_A Aspartate-semialdehyde dehydrogenase; NADP, oxidoreductase-oxidoreductase inhibitor complex; HET: NAP; 1.75A {Vibrio cholerae} PDB: 1mc4_A 1mb4_A* 3q0e_A | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00072 Score=58.42 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=41.6
Q ss_pred CeEEEECCCchHHHHHHH-HHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+||||++|..|++ .|.++.+ ++..++-+. ......... .....+.+.+... .++++|+||.|++
T Consensus 1 ~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~~-aG~~~~~~~----~~~~~~~~~~~~~-~~~~~Dvvf~a~~ 73 (370)
T 3pzr_A 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQ-IGVPAPNFG----KDAGMLHDAFDIE-SLKQLDAVITCQG 73 (370)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCCSS----SCCCBCEETTCHH-HHTTCSEEEECSC
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCCCceEEEEEeccc-cCcCHHHhC----CCceEEEecCChh-HhccCCEEEECCC
Confidence 689999999999999999 7777663 566554332 222221110 0011222222222 2578999999986
|
| >1t4b_A Aspartate-semialdehyde dehydrogenase; asadh, HOSR, lysine biosynthesis, NADP+ oxidoreductase (phosphorylating), domain movement; 1.60A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1t4d_A 1brm_A 1gl3_A* 1nwc_A 1ta4_A 1tb4_A 1ps8_A 1pr3_A 1oza_A 1pqu_A* 1pqp_A 1nwh_A* 1nx6_A* 1pu2_A* 1q2x_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00045 Score=59.83 Aligned_cols=70 Identities=13% Similarity=0.158 Sum_probs=40.9
Q ss_pred CCeEEEECCCchHHHHHHH-HHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|.||+|++|+.+++ .|.++++ .++.+..+. ....... .. ...+.+.+.+...+ ++++|+||.|.+
T Consensus 1 m~kVaIvGAtG~vG~~llr~ll~~~~~~~v~i~~~~~~s-~G~~v~~-~~---g~~i~~~~~~~~~~-~~~~DvVf~a~g 74 (367)
T 1t4b_A 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQ-LGQAAPS-FG---GTTGTLQDAFDLEA-LKALDIIVTCQG 74 (367)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSS-TTSBCCG-GG---TCCCBCEETTCHHH-HHTCSEEEECSC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhcCCCCeEEEEEEEeCC-CCCCccc-cC---CCceEEEecCChHH-hcCCCEEEECCC
Confidence 4799999999999999999 5555554 455555542 2222110 00 00122222222222 368999999986
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.59 E-value=3.7e-05 Score=66.63 Aligned_cols=73 Identities=14% Similarity=0.133 Sum_probs=51.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh---hhC--CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CIQ--GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---~~~--~~d~vi~~a 94 (325)
..+|+|+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+...+ ... ++|+||+++
T Consensus 171 g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~ 247 (351)
T 1yb5_A 171 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEML 247 (351)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred cCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHcCC---CEEEeCCCchHHHHHHHHcCCCCcEEEEECC
Confidence 3589999999999999999999999999999998765433222111 11244444443332 222 699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 248 G 248 (351)
T 1yb5_A 248 A 248 (351)
T ss_dssp H
T ss_pred C
Confidence 7
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=4.2e-05 Score=66.11 Aligned_cols=73 Identities=21% Similarity=0.128 Sum_probs=51.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCCchhHhhh-----CCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~ 93 (325)
..+|||+||+|.+|..+++.+...|.+|++++|++++..... .... ...+|..+.+.+.+.+ .++|+||++
T Consensus 156 g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~ 232 (345)
T 2j3h_A 156 GETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGF---DDAFNYKEESDLTAALKRCFPNGIDIYFEN 232 (345)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCC---SEEEETTSCSCSHHHHHHHCTTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCC---ceEEecCCHHHHHHHHHHHhCCCCcEEEEC
Confidence 358999999999999999999999999999999876544332 2111 1124544443333322 269999999
Q ss_pred CC
Q 020476 94 AG 95 (325)
Q Consensus 94 a~ 95 (325)
+|
T Consensus 233 ~g 234 (345)
T 2j3h_A 233 VG 234 (345)
T ss_dssp SC
T ss_pred CC
Confidence 87
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=97.59 E-value=7.9e-05 Score=63.39 Aligned_cols=69 Identities=12% Similarity=0.064 Sum_probs=49.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHh-hhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~-~~~~~d~vi~~a~ 95 (325)
++|||.|+| .|.+|..+++.|.+.|+ +|++++|+++.......... ++-. .+++.+ +++++|+||-+..
T Consensus 32 ~~~kI~IIG-~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~------~~~~-~~~~~~~~~~~aDvVilavp 103 (314)
T 3ggo_A 32 SMQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------IDEG-TTSIAKVEDFSPDFVMLSSP 103 (314)
T ss_dssp SCSEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------CSEE-ESCTTGGGGGCCSEEEECSC
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCC------cchh-cCCHHHHhhccCCEEEEeCC
Confidence 457999999 79999999999999999 99999998765443322111 1100 123445 6789999999864
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00018 Score=60.90 Aligned_cols=44 Identities=20% Similarity=0.302 Sum_probs=35.4
Q ss_pred HHhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc
Q 020476 14 RLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58 (325)
Q Consensus 14 ~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 58 (325)
+.|...++||.|+|+ |.+|..++..|++.|++|++++|+++...
T Consensus 9 ~~~~~~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~ 52 (302)
T 1f0y_A 9 SAKKIIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILA 52 (302)
T ss_dssp ---CCCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHH
T ss_pred ccccccCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHH
Confidence 334445679999996 99999999999999999999999876543
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00019 Score=61.94 Aligned_cols=32 Identities=25% Similarity=0.549 Sum_probs=27.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEe
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT 51 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~ 51 (325)
|+||.|.||+|++|+.+++.|.++. .+++++.
T Consensus 4 ~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~ 36 (350)
T 2ep5_A 4 KIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVS 36 (350)
T ss_dssp CEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEe
Confidence 4699999999999999999998765 4788885
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=97.57 E-value=5.1e-05 Score=63.82 Aligned_cols=66 Identities=15% Similarity=0.230 Sum_probs=50.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|+| .|.+|..+++.|++.|++|++++|++++....... ++. -.++..++++++|+||-+..
T Consensus 1 M~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~--~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 1 MTTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------GAR--QASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------TCE--ECSCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCe--ecCCHHHHHHcCCEEEEEcC
Confidence 57999999 79999999999999999999999988765543321 112 22356667778999998864
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00012 Score=60.87 Aligned_cols=69 Identities=12% Similarity=0.087 Sum_probs=53.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++++|+|+ |..|+.++..|.+.|. +|+++.|+.++...+... +.....+++.++++++|+||++...
T Consensus 116 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~--------~~~~~~~~~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 116 EDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWSLN--------INKINLSHAESHLDEFDIIINTTPA 185 (277)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCSC--------CEEECHHHHHHTGGGCSEEEECCC-
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHh--------cccccHhhHHHHhcCCCEEEECccC
Confidence 4579999996 8999999999999998 899999998776554432 2333445566777899999999753
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.56 E-value=3.8e-05 Score=65.11 Aligned_cols=69 Identities=12% Similarity=0.057 Sum_probs=49.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|||.|+| .|.+|..+++.|++.|++|++++|++++........ ... -.+++.++++++|+||-+..
T Consensus 5 ~~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~g-------~~~-~~~~~~e~~~~aDvvi~~vp 73 (303)
T 3g0o_A 5 GTDFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLLAEG-------ACG-AAASAREFAGVVDALVILVV 73 (303)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CSE-EESSSTTTTTTCSEEEECCS
T ss_pred CCCCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcC-------Ccc-ccCCHHHHHhcCCEEEEECC
Confidence 4567999998 699999999999999999999999887654433221 111 02344556678898888864
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.55 E-value=3e-05 Score=66.71 Aligned_cols=73 Identities=16% Similarity=0.065 Sum_probs=51.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhH---hhh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~---~~~--~~~d~vi~~a 94 (325)
..+|+|+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+... +.. .++|+||+++
T Consensus 146 g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~i~~~~~~~~~d~vi~~~ 222 (333)
T 1wly_A 146 GDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARKLGC---HHTINYSTQDFAEVVREITGGKGVDVVYDSI 222 (333)
T ss_dssp TCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHTTCCEEEEEECS
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCCHHHHHHHHHHhCCCCCeEEEECC
Confidence 3589999999999999999999999999999998754333221111 1124544544333 222 2699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 223 g 223 (333)
T 1wly_A 223 G 223 (333)
T ss_dssp C
T ss_pred c
Confidence 8
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00013 Score=62.21 Aligned_cols=70 Identities=17% Similarity=0.153 Sum_probs=48.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCccc---ccCCCCCccccCceeecCCc-hhHhhhCCCCEEEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAE---LIFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVN 92 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d~~d~~-~~~~~~~~~d~vi~ 92 (325)
.|+|||.|+| .|.+|..+++.|++.| ++|++++|+++... ....... ..++ .+ +..++++++|+||-
T Consensus 22 ~M~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~---~~g~----~~~s~~e~~~~aDvVi~ 93 (317)
T 4ezb_A 22 SMMTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAA---ELGV----EPLDDVAGIACADVVLS 93 (317)
T ss_dssp TSCCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHH---HTTC----EEESSGGGGGGCSEEEE
T ss_pred ccCCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHH---HCCC----CCCCHHHHHhcCCEEEE
Confidence 4668999999 7999999999999999 99999999863111 1100000 0112 33 45567788999998
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
+..
T Consensus 94 avp 96 (317)
T 4ezb_A 94 LVV 96 (317)
T ss_dssp CCC
T ss_pred ecC
Confidence 864
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.54 E-value=5.7e-05 Score=64.54 Aligned_cols=67 Identities=19% Similarity=0.243 Sum_probs=52.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|||.|+| .|.+|..+++.|++.|++|++++|++++...+.... +. -.+++.++++++|+||-+..
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~~g-------~~--~~~~~~e~~~~aDvVi~~vp 96 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAALG-------AT--IHEQARAAARDADIVVSMLE 96 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CE--EESSHHHHHTTCSEEEECCS
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHCC-------CE--eeCCHHHHHhcCCEEEEECC
Confidence 457999998 699999999999999999999999887655443321 22 22456677889999998864
|
| >3uw3_A Aspartate-semialdehyde dehydrogenase; structural genomics, seattle structural genomics center for infectious disease (ssgcid); 1.55A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00082 Score=58.19 Aligned_cols=70 Identities=13% Similarity=0.189 Sum_probs=42.0
Q ss_pred CCeEEEECCCchHHHHHHH-HHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQ-RLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~-~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.|||.|+||||++|..|++ .|.++.+ ++..++-+ +......... .....+.+.+... .++++|+||.|++
T Consensus 4 ~~~VaIvGATG~vG~ellr~lL~~hp~~~~~l~~~ss~-~aG~~~~~~~----~~~~~v~~~~~~~-~~~~vDvvf~a~~ 77 (377)
T 3uw3_A 4 SMNVGLVGWRGMVGSVLMQRMQEEGDFDLIEPVFFSTS-NAGGKAPSFA----KNETTLKDATSID-DLKKCDVIITCQG 77 (377)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESS-CTTSBCCTTC----CSCCBCEETTCHH-HHHTCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhhCCCCceEEEEEech-hcCCCHHHcC----CCceEEEeCCChh-HhcCCCEEEECCC
Confidence 4799999999999999999 7777663 56655443 2222221110 0011122222222 2468999999986
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.53 E-value=6e-05 Score=63.59 Aligned_cols=75 Identities=15% Similarity=0.109 Sum_probs=53.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++++|+|+ |.+|+.++..|++.|. +|+++.|+.++...+...... ... ++.+.+.+.+.+.++|+||++++..
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~--~~~-~~~~~~~~~~~~~~aDivIn~t~~~ 215 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDE--RRS-AYFSLAEAETRLAEYDIIINTTSVG 215 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCS--SSC-CEECHHHHHHTGGGCSEEEECSCTT
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhh--ccC-ceeeHHHHHhhhccCCEEEECCCCC
Confidence 4579999996 8899999999999997 999999987665443221100 000 2333346667778999999999754
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.53 E-value=9.5e-05 Score=62.92 Aligned_cols=100 Identities=15% Similarity=0.185 Sum_probs=65.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|| |.+|..++..|+..+. +|.++++++++.... .... .....+.+.. + -.+.++++|+||.++
T Consensus 6 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~--~~~~~~~v~~-~-~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ--AFTAPKKIYS-G-EYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG--GGSCCCEEEE-C-CGGGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH--HhcCCeEEEE-C-CHHHhCCCCEEEECC
Confidence 79999998 9999999999988775 899999875443211 0100 0011223332 2 245689999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+.. ......++...|+...+.+.+.+.+.
T Consensus 81 g~~~~---~g~~R~dl~~~n~~i~~~i~~~i~~~ 111 (318)
T 1ez4_A 81 GAPQK---PGESRLDLVNKNLNILSSIVKPVVDS 111 (318)
T ss_dssp CC-------------CHHHHHHHHHHHHHHHHHT
T ss_pred CCCCC---CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 86421 12234566778999999999999984
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=97.53 E-value=6e-05 Score=64.11 Aligned_cols=68 Identities=19% Similarity=0.293 Sum_probs=52.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..||||.|+| .|.+|..+++.|++.|++|++++|++++...+... ++. -.++..++++++|+||-+..
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~~~-------g~~--~~~~~~~~~~~aDvvi~~vp 86 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELVEH-------GAS--VCESPAEVIKKCKYTIAMLS 86 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------TCE--ECSSHHHHHHHCSEEEECCS
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCe--EcCCHHHHHHhCCEEEEEcC
Confidence 4568999999 69999999999999999999999988765544321 122 23455667778999998864
|
| >3tz6_A Aspartate-semialdehyde dehydrogenase; asadh, ASD, ASA, amino-acid biosynthesis, diaminopimelate biosynthesis, lysine biosynthesis; HET: SO4; 1.95A {Mycobacterium tuberculosis} PDB: 3vos_A* 3kub_A 3llg_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00033 Score=59.96 Aligned_cols=66 Identities=24% Similarity=0.400 Sum_probs=42.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceee--cCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+||||++|..|++.|.++.+ ++..+....+..+... +.+.|+ .+.+. +.++++|+||.|++
T Consensus 2 ~~VaIvGatG~vG~el~~lL~~h~fp~~el~~~~s~~~aG~~~~-------~~~~~~~~~~~~~--~~~~~~Dvvf~a~~ 72 (344)
T 3tz6_A 2 LSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKLA-------FRGQEIEVEDAET--ADPSGLDIALFSAG 72 (344)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTSSCEEE-------ETTEEEEEEETTT--SCCTTCSEEEECSC
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCceEEEEEECcccCCCcee-------ecCCceEEEeCCH--HHhccCCEEEECCC
Confidence 5899999999999999999988854 4555553333222221 111122 12221 23478999999986
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.52 E-value=5.5e-05 Score=65.72 Aligned_cols=72 Identities=17% Similarity=0.069 Sum_probs=50.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCC-CCCccccCceeecCCchhHh---hhC-CCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWRD---CIQ-GSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~~---~~~-~~d~vi~~a 94 (325)
.+|+|+||+|.+|..+++.+...|. +|++++|++++...... ... ...+|..+.+.... ... ++|+||+|+
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~---~~~~d~~~~~~~~~~~~~~~~~~d~vi~~~ 238 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGF---DAAINYKKDNVAEQLRESCPAGVDVYFDNV 238 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCC---SEEEETTTSCHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCC---ceEEecCchHHHHHHHHhcCCCCCEEEECC
Confidence 6899999999999999999999999 99999997655333221 111 11245545433222 222 699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 239 G 239 (357)
T 2zb4_A 239 G 239 (357)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00014 Score=61.37 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=47.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|.+||.++| .|..|..+++.|++.||+|++++|++++...+.... +. -.++..++++++|+||-|..
T Consensus 4 Ms~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~G-------~~--~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 4 MSEKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTKLG-------AT--VVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTTTT-------CE--ECSSGGGGCCTTCEEEECCS
T ss_pred CCCcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcC-------Ce--EeCCHHHHHhcCCceeeecc
Confidence 345899999 799999999999999999999999998876655432 22 23456677889999998864
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00034 Score=59.59 Aligned_cols=104 Identities=17% Similarity=0.194 Sum_probs=65.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccC-CCCCc-c-ccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF-PGKKT-R-FFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~-~~~~~-~-~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+|+ |.+|..++..|++.|+ +|++++++++...... ..... . ......+...+++ +.++++|+||-+++
T Consensus 4 ~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t~d~-~a~~~aDiVi~avg 81 (317)
T 2ewd_A 4 RRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGTDDY-ADISGSDVVIITAS 81 (317)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEECCCH-HHhCCCCEEEEeCC
Confidence 479999997 9999999999999998 9999999876543310 00000 0 0001122211234 56789999999998
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.+...... ..+....|....+.+++.+.+.
T Consensus 82 ~p~~~g~~---r~d~~~~~~~i~~~i~~~i~~~ 111 (317)
T 2ewd_A 82 IPGRPKDD---RSELLFGNARILDSVAEGVKKY 111 (317)
T ss_dssp CSSCCSSC---GGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCc---HHHHHHhhHHHHHHHHHHHHHH
Confidence 65332222 2233445677777788877763
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00018 Score=61.38 Aligned_cols=102 Identities=19% Similarity=0.242 Sum_probs=66.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCC--CccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGK--KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~--~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
|||.|+|+ |.+|..++..|++.|+ +|++++|+++......... .........+... . .+.++++|+||.+++.
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~~-d-~~~~~~aDvViiav~~ 77 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYAG-D-YADLKGSDVVIVAAGV 77 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEEC-C-GGGGTTCSEEEECCCC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEeC-C-HHHhCCCCEEEEccCC
Confidence 68999997 9999999999999998 9999999865433211000 0000011122211 2 2457899999999986
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.. ......++...|+.....+++.+.+.
T Consensus 78 ~~~---~g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (319)
T 1a5z_A 78 PQK---PGETRLQLLGRNARVMKEIARNVSKY 106 (319)
T ss_dssp CCC---SSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 421 11124456678888888998888873
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=9.7e-05 Score=62.91 Aligned_cols=103 Identities=23% Similarity=0.177 Sum_probs=66.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
++|||.|+|+ |.+|..++..|+..+. +|++++++++...... .... .......+.. + ..+.++++|+||.
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~-~~~~~~~i~~-~-~~~al~~aDvVii 80 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV-FAPKPVDIWH-G-DYDDCRDADLVVI 80 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT-SSSSCCEEEE-C-CGGGTTTCSEEEE
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHHhh-hcCCCeEEEc-C-cHHHhCCCCEEEE
Confidence 3579999998 9999999999987764 8999999764322110 0000 0000122221 1 2356889999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+++.+..... ...+....|....+.+.+.+.+.
T Consensus 81 a~~~~~~~g~---~r~dl~~~n~~i~~~i~~~i~~~ 113 (316)
T 1ldn_A 81 CAGANQKPGE---TRLDLVDKNIAIFRSIVESVMAS 113 (316)
T ss_dssp CCSCCCCTTT---CSGGGHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCC---CHHHHHHcChHHHHHHHHHHHHH
Confidence 9987533221 22345567888888888888874
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=4.7e-05 Score=66.06 Aligned_cols=73 Identities=14% Similarity=0.059 Sum_probs=51.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh---hh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---~~--~~~d~vi~~a 94 (325)
..+|+|+||+|-+|..+++.+...|.+|++++|++++......... ...+|..+.+...+ .. .++|+||+|+
T Consensus 163 g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 239 (354)
T 2j8z_A 163 GDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAEKLGA---AAGFNYKKEDFSEATLKFTKGAGVNLILDCI 239 (354)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCC---cEEEecCChHHHHHHHHHhcCCCceEEEECC
Confidence 3589999999999999999999999999999998755433221111 11244445443333 22 2699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 240 G 240 (354)
T 2j8z_A 240 G 240 (354)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00019 Score=63.31 Aligned_cols=73 Identities=14% Similarity=0.037 Sum_probs=57.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
.|+|+|+|. |.+|+.+++.|.+.|++|++++++++.......... ....+|..+++.+.++ ++++|+||-+..
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~g~--~vi~GDat~~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKFGM--KVFYGDATRMDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHTTC--CCEESCTTCHHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhCCC--eEEEcCCCCHHHHHhcCCCccCEEEECCC
Confidence 468999995 999999999999999999999999876554332211 1334688888888776 689999998865
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00022 Score=60.42 Aligned_cols=100 Identities=23% Similarity=0.306 Sum_probs=69.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|| |.+|..++..|+..+ .+|.++++++++... +..... ....+.+.. +. .+.++++|+||.++
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~~--~~~~~~v~~-~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHATP--FAHPVWVWA-GS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTGG--GSCCCEEEE-CC-GGGGTTEEEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhHh--hcCCeEEEE-CC-HHHhCCCCEEEECC
Confidence 69999998 999999999998886 589999997644322 111100 011223332 22 45689999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+... .....++...|+...+.+.+.+.+.
T Consensus 76 g~~~~~---g~~r~dl~~~n~~i~~~i~~~i~~~ 106 (310)
T 2xxj_A 76 GVAQRP---GETRLQLLDRNAQVFAQVVPRVLEA 106 (310)
T ss_dssp CCCCCT---TCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCC---CcCHHHHHHhhHHHHHHHHHHHHHH
Confidence 875222 2234567788999999999998884
|
| >3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=97.47 E-value=9.1e-05 Score=61.48 Aligned_cols=67 Identities=13% Similarity=0.151 Sum_probs=48.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+|+ |.+|+.+++.|.+.|++ |.+++|++++....... .++.. .+++.++++++|+||-+..
T Consensus 10 ~m~i~iiG~-G~mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~------~g~~~--~~~~~~~~~~~Dvvi~av~ 77 (266)
T 3d1l_A 10 DTPIVLIGA-GNLATNLAKALYRKGFRIVQVYSRTEESARELAQK------VEAEY--TTDLAEVNPYAKLYIVSLK 77 (266)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHH------TTCEE--ESCGGGSCSCCSEEEECCC
T ss_pred CCeEEEEcC-CHHHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHH------cCCce--eCCHHHHhcCCCEEEEecC
Confidence 579999995 99999999999999998 88899887654433221 01222 2244556778999999864
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.47 E-value=5.3e-05 Score=64.38 Aligned_cols=103 Identities=17% Similarity=0.169 Sum_probs=68.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
..|||.|+|+ |.+|..++..|+..|. +|.++++++++.... ..... ......+.-..++.+ ++++|+||-
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~--~~~~~~i~~t~d~~~-~~daDiVIi 95 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL--FLHTAKIVSGKDYSV-SAGSKLVVI 95 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG--GSCCSEEEEESSSCS-CSSCSEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh--cccCCeEEEcCCHHH-hCCCCEEEE
Confidence 3579999998 9999999999998886 899999876533211 00000 001112222223433 789999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+||.+... .....+....|+.-.+.+.+.+.+.
T Consensus 96 taG~p~kp---G~tR~dll~~N~~I~k~i~~~I~k~ 128 (330)
T 3ldh_A 96 TAGARQQE---GESRLNLVQRNVNIFKFIIPNIVKH 128 (330)
T ss_dssp CCSCCCCS---SCCTTGGGHHHHHHHHHHHHHHHHH
T ss_pred eCCCCCCC---CCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 99975322 2234466778898899999988884
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.001 Score=48.99 Aligned_cols=62 Identities=13% Similarity=0.179 Sum_probs=44.6
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.|+|+| |.+|..+++.|++.|++|+.++++.... .+... ..++.++.+.+|+++-+..
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------~G~~~--~~s~~el~~~vDlvii~vp 78 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------EGLKC--YRSVRELPKDVDVIVFVVP 78 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------TTEEC--BSSGGGSCTTCCEEEECSC
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------CCeee--cCCHHHhCCCCCEEEEEeC
Confidence 4689999997 8999999999999999988777654221 11222 2344455568999998853
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.45 E-value=8.3e-05 Score=64.71 Aligned_cols=73 Identities=21% Similarity=0.125 Sum_probs=49.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhh-CCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI-QGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~-~~~d~vi~~a~ 95 (325)
..+|||+||+|.+|..+++.+...|.+|++++|++++......... ...+|..+.+. +.+.. .++|+||+++|
T Consensus 164 g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g 240 (362)
T 2c0c_A 164 GKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGC---DRPINYKTEPVGTVLKQEYPEGVDVVYESVG 240 (362)
T ss_dssp TCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHCTTCEEEEEECSC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCC---cEEEecCChhHHHHHHHhcCCCCCEEEECCC
Confidence 3589999999999999999999999999999998655433322111 11133333322 22222 36999999987
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.0002 Score=61.97 Aligned_cols=66 Identities=15% Similarity=0.231 Sum_probs=48.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC---CCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG---STAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~---~d~vi~~a~ 95 (325)
+|||.|+| .|.+|..+++.|++.|++|++++|++++...+.... +. ..+++.+++++ +|+||-+..
T Consensus 22 ~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~~g-------~~--~~~s~~e~~~~a~~~DvVi~~vp 90 (358)
T 4e21_A 22 SMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALEREG-------IA--GARSIEEFCAKLVKPRVVWLMVP 90 (358)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTT-------CB--CCSSHHHHHHHSCSSCEEEECSC
T ss_pred CCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHCC-------CE--EeCCHHHHHhcCCCCCEEEEeCC
Confidence 47999999 799999999999999999999999887655544321 11 22344444444 499998864
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00071 Score=55.03 Aligned_cols=72 Identities=22% Similarity=0.261 Sum_probs=47.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a 94 (325)
|||+|+|++|.+|+.+++.+.+. ++++.++....+......... .-.-+|+..++...+.+ .+.++|+-..
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~~~---~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTT 77 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTDGN---TEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTT 77 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHHTT---CCEEEECSCTTTHHHHHHHHHHTTCEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhccC---CcEEEEccChHHHHHHHHHHHHcCCCEEEcCC
Confidence 58999999999999999998866 899887765443222111100 02236777777665443 2678888665
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 78 G 78 (245)
T 1p9l_A 78 G 78 (245)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0001 Score=61.90 Aligned_cols=65 Identities=17% Similarity=0.256 Sum_probs=50.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|..+++.|++.|++|++++|++++....... ++. -.+++.++++++|+||-+..
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~--~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL-------GAE--RAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT-------TCE--ECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------CCe--ecCCHHHHHhcCCEEEEEcC
Confidence 7999999 69999999999999999999999988775544322 122 23456677788999998864
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=97.41 E-value=6.5e-05 Score=62.10 Aligned_cols=68 Identities=15% Similarity=0.214 Sum_probs=49.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.||||.|+| .|.+|+.+++.|.+.|++|.+++|++++....... + ++. -.+++.++++++|+||-+..
T Consensus 2 ~~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~-----~-g~~--~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 2 NAMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQ-----L-ALP--YAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp -CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHH-----H-TCC--BCSSHHHHHHTCSEEEECSC
T ss_pred CccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHH-----c-CCE--eeCCHHHHHhcCCEEEEEeC
Confidence 457999999 79999999999999999999999987654433211 0 111 12345566778999999874
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00013 Score=62.09 Aligned_cols=68 Identities=12% Similarity=0.111 Sum_probs=48.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC--CcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
..+|||.|+| .|.+|..+++.|++.|+ +|++++|++ +........ ++.. .++..++++++|+||-+.
T Consensus 22 ~~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~~-------g~~~--~~~~~e~~~~aDvVi~~v 91 (312)
T 3qsg_A 22 SNAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEEL-------GVSC--KASVAEVAGECDVIFSLV 91 (312)
T ss_dssp ---CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHHT-------TCEE--CSCHHHHHHHCSEEEECS
T ss_pred CCCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHHC-------CCEE--eCCHHHHHhcCCEEEEec
Confidence 3467999999 69999999999999999 999999974 333222211 1222 235566778899999987
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 92 p 92 (312)
T 3qsg_A 92 T 92 (312)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.0002 Score=60.04 Aligned_cols=75 Identities=12% Similarity=0.098 Sum_probs=50.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc--------c-ccC--ce-----eecCCchhHhh
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT--------R-FFP--GV-----MIAEEPQWRDC 83 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~--------~-~~~--~~-----d~~d~~~~~~~ 83 (325)
++||.|+| .|.+|+.+++.|++.|++|++++|+++........... . ... .. .+.-.+++.++
T Consensus 4 ~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 4 ITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 46999999 59999999999999999999999987654332211000 0 000 00 01123456677
Q ss_pred hCCCCEEEECCC
Q 020476 84 IQGSTAVVNLAG 95 (325)
Q Consensus 84 ~~~~d~vi~~a~ 95 (325)
++++|+||.+..
T Consensus 83 ~~~aDlVi~av~ 94 (283)
T 4e12_A 83 VKDADLVIEAVP 94 (283)
T ss_dssp TTTCSEEEECCC
T ss_pred hccCCEEEEecc
Confidence 889999999975
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00016 Score=61.37 Aligned_cols=106 Identities=12% Similarity=0.095 Sum_probs=65.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
||||.|+| .|.+|..++..|++.| ++|++++|+++......... .......+.+.. .+. +.++++|+||-++
T Consensus 1 m~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~d~-~~~~~aDvViiav 77 (309)
T 1hyh_A 1 ARKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-NDW-AALADADVVISTL 77 (309)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-SCG-GGGTTCSEEEECC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe-CCH-HHhCCCCEEEEec
Confidence 47999999 7999999999999988 89999999865433221100 000001123311 234 5678999999998
Q ss_pred CCCCC-CCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 95 GTPIG-TRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 95 ~~~~~-~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
+.+.. .+.......++...|+.....+++.+.+.
T Consensus 78 ~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~ 112 (309)
T 1hyh_A 78 GNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKES 112 (309)
T ss_dssp SCGGGTC-------CTTHHHHHHHHHHHHHHHHHT
T ss_pred CCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 75321 00011122344557788888888888773
|
| >1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00031 Score=61.44 Aligned_cols=79 Identities=15% Similarity=0.321 Sum_probs=51.3
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCC-------CeEEEEecCCC-----cccccCCCCCcc-ccCcee----ecCCc
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRS-----KAELIFPGKKTR-FFPGVM----IAEEP 78 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~-----~~~~~~~~~~~~-~~~~~d----~~d~~ 78 (325)
++.|||||.|+| +|.+|..++..|++.| ++|++++|+++ ....+....... ..++.. +.-.+
T Consensus 17 ~~~~~~kI~iIG-aG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~ 95 (375)
T 1yj8_A 17 LKDGPLKISILG-SGNWASAISKVVGTNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNIVAHS 95 (375)
T ss_dssp HHHSCBCEEEEC-CSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTEEEES
T ss_pred CccCCCEEEEEC-cCHHHHHHHHHHHHcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCeEEEC
Confidence 456678999999 5999999999999999 99999999876 332221100000 001111 11122
Q ss_pred hhHhhhCCCCEEEECCC
Q 020476 79 QWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 79 ~~~~~~~~~d~vi~~a~ 95 (325)
+..++++++|+||-+..
T Consensus 96 ~~~ea~~~aDvVilav~ 112 (375)
T 1yj8_A 96 DLASVINDADLLIFIVP 112 (375)
T ss_dssp STHHHHTTCSEEEECCC
T ss_pred CHHHHHcCCCEEEEcCC
Confidence 34566789999999853
|
| >1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00085 Score=56.22 Aligned_cols=72 Identities=15% Similarity=0.139 Sum_probs=47.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|+ |.+|..++..|.+.|++|++++|++++...+............++.. +. .+.++++|+||-+..
T Consensus 1 m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~-~~-~~~~~~~d~vi~~v~ 72 (291)
T 1ks9_A 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTA-ND-PDFLATSDLLLVTLK 72 (291)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEE-SC-HHHHHTCSEEEECSC
T ss_pred CeEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCccceeeEEEEcCCCceeeeeeee-cC-ccccCCCCEEEEEec
Confidence 68999996 99999999999999999999999886654332111000000011111 11 245678999999875
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00021 Score=61.84 Aligned_cols=72 Identities=6% Similarity=-0.003 Sum_probs=50.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhH---hhh--CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~---~~~--~~~d~vi~~a~ 95 (325)
.+++|+||+|-+|...++.+...|.+|+++++++++.+....... ...+|..+.+... ++. +++|+||+++|
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g 242 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKDIGA---AHVLNEKAPDFEATLREVMKAEQPRIFLDAVT 242 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHTC---SEEEETTSTTHHHHHHHHHHHHCCCEEEESSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEECCcHHHHHHHHHHhcCCCCcEEEECCC
Confidence 589999999999999999888889999999988766443332111 1123333333222 222 27999999987
|
| >2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00019 Score=60.31 Aligned_cols=64 Identities=16% Similarity=0.030 Sum_probs=46.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||||.|+| .|.+|..+++.|.+ |++|++++|++++....... ++...+ ..++++++|+||.+..
T Consensus 1 M~~i~iiG-~G~~G~~~a~~l~~-g~~V~~~~~~~~~~~~~~~~-------g~~~~~---~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 1 MEKVAFIG-LGAMGYPMAGHLAR-RFPTLVWNRTFEKALRHQEE-------FGSEAV---PLERVAEARVIFTCLP 64 (289)
T ss_dssp -CCEEEEC-CSTTHHHHHHHHHT-TSCEEEECSSTHHHHHHHHH-------HCCEEC---CGGGGGGCSEEEECCS
T ss_pred CCeEEEEc-ccHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHHC-------CCcccC---HHHHHhCCCEEEEeCC
Confidence 46999999 59999999999999 99999999987654433221 111222 4456678999999875
|
| >3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579} | Back alignment and structure |
|---|
Probab=97.35 E-value=5.6e-05 Score=62.05 Aligned_cols=67 Identities=9% Similarity=0.114 Sum_probs=50.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC----eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~----~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|+|||.|+| .|.+|..+++.|++.|+ +|++++|++++....... .++.. .++..++++++|+||-+.
T Consensus 1 M~~~i~iIG-~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~------~g~~~--~~~~~e~~~~aDvVilav 71 (247)
T 3gt0_A 1 MDKQIGFIG-CGNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEK------YGLTT--TTDNNEVAKNADILILSI 71 (247)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHH------HCCEE--CSCHHHHHHHCSEEEECS
T ss_pred CCCeEEEEC-ccHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHH------hCCEE--eCChHHHHHhCCEEEEEe
Confidence 357999999 79999999999999998 999999987665443221 01222 234556677899999987
|
| >3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum} | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00053 Score=60.62 Aligned_cols=78 Identities=21% Similarity=0.290 Sum_probs=53.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCce-----------eecCCchhHhhhCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGV-----------MIAEEPQWRDCIQGS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~-----------d~~d~~~~~~~~~~~ 87 (325)
.|.+|.|+| .||+|..++..|++.||+|++++.++++...+........-+++ .+.=..+..++++++
T Consensus 20 ~m~~IaViG-lGYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~tt~~~~ai~~a 98 (444)
T 3vtf_A 20 HMASLSVLG-LGYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFAESAEEAVAAT 98 (444)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEECSSHHHHHHTS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEEcCHHHHHhcC
Confidence 356899999 79999999999999999999999988776555432110001111 111123445667789
Q ss_pred CEEEECCCCC
Q 020476 88 TAVVNLAGTP 97 (325)
Q Consensus 88 d~vi~~a~~~ 97 (325)
|++|-|.+-+
T Consensus 99 d~~~I~VpTP 108 (444)
T 3vtf_A 99 DATFIAVGTP 108 (444)
T ss_dssp SEEEECCCCC
T ss_pred CceEEEecCC
Confidence 9999998754
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.35 E-value=7.4e-05 Score=63.15 Aligned_cols=66 Identities=14% Similarity=0.254 Sum_probs=48.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+| .|.+|..+++.|.+.|++|++++|++++....... ++.. .+++.++++++|+||.+..
T Consensus 5 ~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~--~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 5 TMKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAA-------GAET--ASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp -CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT-------TCEE--CSSHHHHHHHCSEEEECCS
T ss_pred cceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHC-------CCee--cCCHHHHHhCCCEEEEECC
Confidence 47999999 69999999999999999999999987654433221 1221 2345566678999999875
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.34 E-value=9.3e-05 Score=64.17 Aligned_cols=73 Identities=22% Similarity=0.146 Sum_probs=51.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh----CCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI----QGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~----~~~d~vi~~a~ 95 (325)
..+|||+||+|-+|...++.+...|.+|++++|++++......... ...+|..+.+....+. .++|+||+++|
T Consensus 168 g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g 244 (353)
T 4dup_A 168 GESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACERLGA---KRGINYRSEDFAAVIKAETGQGVDIILDMIG 244 (353)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHHSSCEEEEEESCC
T ss_pred CCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---CEEEeCCchHHHHHHHHHhCCCceEEEECCC
Confidence 3589999999999999999999999999999998765443322111 1123444444333222 37999999997
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00011 Score=60.23 Aligned_cols=79 Identities=25% Similarity=0.323 Sum_probs=48.9
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc--ccccCCCCC----ccccCceeecCCchhHhhhCCCCE
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKK----TRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
.....|||.|+| .|.+|..+++.|++.|++|++.+|++++ ......... .............+..++++++|+
T Consensus 15 ~~~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aDv 93 (245)
T 3dtt_A 15 LYFQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVHLAAFADVAAGAEL 93 (245)
T ss_dssp ----CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCEEEEHHHHHHHCSE
T ss_pred cccCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCceeccCHHHHHhcCCE
Confidence 344568999998 7999999999999999999999998765 111000000 000000001123455667788999
Q ss_pred EEECCC
Q 020476 90 VVNLAG 95 (325)
Q Consensus 90 vi~~a~ 95 (325)
||-+..
T Consensus 94 Vilavp 99 (245)
T 3dtt_A 94 VVNATE 99 (245)
T ss_dssp EEECSC
T ss_pred EEEccC
Confidence 999874
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.0002 Score=61.90 Aligned_cols=74 Identities=20% Similarity=0.139 Sum_probs=51.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhh--CCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~--~~~d~vi~~ 93 (325)
..+|+|+||+|-+|..+++.+... |.+|+++++++++......... ...+|..+.+. +.++. .++|+||++
T Consensus 171 g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 247 (347)
T 1jvb_A 171 TKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVIDL 247 (347)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEES
T ss_pred CCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCC---CEEecCCCccHHHHHHHHhcCCCceEEEEC
Confidence 358999999989999999999988 9999999987755433221111 11234445443 34444 369999999
Q ss_pred CCC
Q 020476 94 AGT 96 (325)
Q Consensus 94 a~~ 96 (325)
+|.
T Consensus 248 ~g~ 250 (347)
T 1jvb_A 248 NNS 250 (347)
T ss_dssp CCC
T ss_pred CCC
Confidence 983
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.32 E-value=4.7e-05 Score=64.63 Aligned_cols=67 Identities=24% Similarity=0.291 Sum_probs=51.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++|||.|+| .|.+|..+++.|++.|++|++++|++++...+... ++. ..+++.++++++|+||-+..
T Consensus 8 ~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~--~~~~~~e~~~~aDvVi~~vp 74 (306)
T 3l6d_A 8 FEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALVAA-------GAH--LCESVKAALSASPATIFVLL 74 (306)
T ss_dssp CSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH-------TCE--ECSSHHHHHHHSSEEEECCS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHC-------CCe--ecCCHHHHHhcCCEEEEEeC
Confidence 457999999 79999999999999999999999988765443221 111 23456677788999999864
|
| >4dpk_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; 2.05A {Sulfolobus tokodaii} PDB: 4dpm_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0002 Score=61.82 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=28.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 55 (325)
++||.|+||||++|..|++.|.++. .++..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s 43 (359)
T 4dpk_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS 43 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence 4689999999999999999887765 37776654433
|
| >4dpl_A Malonyl-COA/succinyl-COA reductase; dinucleotide binding, dimerization domain, NADP, oxidoreductase; HET: NAP; 1.90A {Sulfolobus tokodaii} PDB: 4dpk_A* 4dpm_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0002 Score=61.82 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=28.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 55 (325)
++||.|+||||++|..|++.|.++. .++..+..+.+
T Consensus 7 ~~kVaIvGATGyvG~eLlrlL~~hP~~el~~l~S~~s 43 (359)
T 4dpl_A 7 TLKAAILGATGLVGIEYVRMLSNHPYIKPAYLAGKGS 43 (359)
T ss_dssp CEEEEETTTTSTTHHHHHHHHTTCSSEEEEEEEESTT
T ss_pred CCeEEEECCCCHHHHHHHHHHHhCCCceEEEEECchh
Confidence 4689999999999999999887765 37776654433
|
| >1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00023 Score=59.98 Aligned_cols=66 Identities=18% Similarity=0.273 Sum_probs=47.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+||||.|+| .|.+|+.+++.|.+.|++|++++ ++++....... ++. -.+++.++++++|+||-+..
T Consensus 2 ~~m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~-~~~~~~~~~~~-------g~~--~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 2 NAMKLGFIG-LGIMGSPMAINLARAGHQLHVTT-IGPVADELLSL-------GAV--NVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp --CEEEECC-CSTTHHHHHHHHHHTTCEEEECC-SSCCCHHHHTT-------TCB--CCSSHHHHHHTCSEEEECCS
T ss_pred CCCEEEEEc-cCHHHHHHHHHHHhCCCEEEEEc-CHHHHHHHHHc-------CCc--ccCCHHHHHhcCCEEEEECC
Confidence 357999999 69999999999999999999888 66554433321 111 22345666778999998864
|
| >3hsk_A Aspartate-semialdehyde dehydrogenase; candida albicans NADP complex, amino-acid biosynthesis; HET: NAP; 2.20A {Candida albicans} | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00043 Score=60.05 Aligned_cols=34 Identities=29% Similarity=0.446 Sum_probs=27.0
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEe
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLT 51 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~ 51 (325)
|+++||.|+||||++|..|++.|.++. .++..+.
T Consensus 17 M~~~kVaIvGAtG~vG~ell~lL~~hp~~el~~l~ 51 (381)
T 3hsk_A 17 MSVKKAGVLGATGSVGQRFILLLSKHPEFEIHALG 51 (381)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEE
T ss_pred CCccEEEEECCCChHHHHHHHHHHcCCCceEEEee
Confidence 345689999999999999999888775 3676553
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00022 Score=61.86 Aligned_cols=74 Identities=12% Similarity=0.073 Sum_probs=49.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc------eee-cCCchhHhhhCCCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG------VMI-AEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~------~d~-~d~~~~~~~~~~~d~vi~ 92 (325)
+|||.|+|+ |.+|..++..|.+.|++|++++|+++........... .... ..+ ...+++.++++++|+||-
T Consensus 4 ~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~ 81 (359)
T 1bg6_A 4 SKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAI-IAEGPGLAGTAHPDLLTSDIGLAVKDADVILI 81 (359)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSE-EEESSSCCEEECCSEEESCHHHHHTTCSEEEE
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCe-EEeccccccccccceecCCHHHHHhcCCEEEE
Confidence 479999995 9999999999999999999999986554332211000 0000 001 012345566788999999
Q ss_pred CCC
Q 020476 93 LAG 95 (325)
Q Consensus 93 ~a~ 95 (325)
+..
T Consensus 82 ~v~ 84 (359)
T 1bg6_A 82 VVP 84 (359)
T ss_dssp CSC
T ss_pred eCC
Confidence 875
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00051 Score=59.81 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=53.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+|||+|+ |-+|...++.+...|.+|+++++++++..... .... ...+|..+.+.+.++..++|+||+++|.
T Consensus 188 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 188 GKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGA---DSFLVSRDQEQMQAAAGTLDGIIDTVSA 261 (366)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCC---SEEEETTCHHHHHHTTTCEEEEEECCSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCC---ceEEeccCHHHHHHhhCCCCEEEECCCc
Confidence 358999996 99999999999889999999999876644322 2111 1123444555666666789999999984
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00018 Score=60.83 Aligned_cols=72 Identities=22% Similarity=0.155 Sum_probs=50.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..+|+|+||+|-+|...++.+...|.+|++++|++++......... ...+|..+.+.+.+.++++|+||+ +|
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~d~vid-~g 197 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLE-VR 197 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEE-CS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEECCcchhHHHHhcCceEEEE-CC
Confidence 3589999999999999999998899999999998766443322111 111333330234444478999999 87
|
| >2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00052 Score=57.30 Aligned_cols=66 Identities=20% Similarity=0.225 Sum_probs=47.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|..+++.|.+.|++|++++|++++........ .. ... .+.+.++ +++|+||.+..
T Consensus 1 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~g----~~-~~~--~~~~~~~-~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQ----LV-DEA--GQDLSLL-QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT----SC-SEE--ESCGGGG-TTCSEEEECSC
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhCC----CC-ccc--cCCHHHh-CCCCEEEEECC
Confidence 6899999 699999999999999999999999876544332211 00 011 1234455 78999999864
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00011 Score=63.43 Aligned_cols=73 Identities=18% Similarity=0.037 Sum_probs=50.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCc---hhHhhh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~---~~~~~~--~~~d~vi~~a 94 (325)
.++|||+||+|-+|..+++.+...|.+|++++|++++......... ...+|..+.+ .+.++. .++|+||+++
T Consensus 167 g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~~ga---~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~ 243 (343)
T 2eih_A 167 GDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKALGA---DETVNYTHPDWPKEVRRLTGGKGADKVVDHT 243 (343)
T ss_dssp TCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHTC---SEEEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhcCC---CEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence 3589999999999999999999999999999997665433321111 1124444443 233333 2699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 244 g 244 (343)
T 2eih_A 244 G 244 (343)
T ss_dssp C
T ss_pred C
Confidence 8
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0002 Score=62.54 Aligned_cols=75 Identities=16% Similarity=0.065 Sum_probs=54.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|+|+|+ |-+|..+++.+...|.+|++++|++.+......... .....+..+.+.+.++++++|+||.+++.+
T Consensus 168 g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g--~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 168 PADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFC--GRIHTRYSSAYELEGAVKRADLVIGAVLVP 242 (377)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTT--TSSEEEECCHHHHHHHHHHCSEEEECCCCT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcC--CeeEeccCCHHHHHHHHcCCCEEEECCCcC
Confidence 468999997 999999999999999999999998765332221000 011133335556778888999999998754
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00015 Score=62.35 Aligned_cols=73 Identities=18% Similarity=0.100 Sum_probs=50.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh---hh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---~~--~~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.+...|.+|+++++++++......... ...+|..+.+...+ .. +++|+||+++
T Consensus 149 g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~ 225 (334)
T 3qwb_A 149 GDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKEYGA---EYLINASKEDILRQVLKFTNGKGVDASFDSV 225 (334)
T ss_dssp TCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---cEEEeCCCchHHHHHHHHhCCCCceEEEECC
Confidence 3589999999999999999999999999999997765443322211 11234444443332 22 2699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 226 g 226 (334)
T 3qwb_A 226 G 226 (334)
T ss_dssp G
T ss_pred C
Confidence 7
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00016 Score=62.82 Aligned_cols=75 Identities=9% Similarity=0.116 Sum_probs=53.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|+|+|+ |-+|..+++.|...|.+|++++|++++......... ........+.+.+.+.++++|+||++++.+
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELLYSNSAEIETAVAEADLLIGAVLVP 241 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC--ceeEeeeCCHHHHHHHHcCCCEEEECCCcC
Confidence 368999998 999999999999999999999998765443322110 011112224456777778999999999754
|
| >1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=97.26 E-value=8.7e-05 Score=66.42 Aligned_cols=126 Identities=10% Similarity=0.083 Sum_probs=69.7
Q ss_pred HHHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhC-----CCeEEEEecCCCcccccCCCCC---ccccCceeecCCchh
Q 020476 9 LLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQAD-----NHQVRVLTRSRSKAELIFPGKK---TRFFPGVMIAEEPQW 80 (325)
Q Consensus 9 ~~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~-----g~~V~~~~r~~~~~~~~~~~~~---~~~~~~~d~~d~~~~ 80 (325)
..+++++|.+.+|||.|+||.+..|..++..|+.+ +++|.+++++++.......... ........+.-..++
T Consensus 17 ~~~~~~~m~m~~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~~~~~~~~~~~l~~~~~~~~I~~t~D~ 96 (472)
T 1u8x_X 17 NLYFQSNMKKKSFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDP 96 (472)
T ss_dssp ---------CCCEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCH
T ss_pred ceeeccccccCCCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHhccCCCCCEEEEECCH
Confidence 45667776433469999998666588888888887 6789999998765332110000 000011233333467
Q ss_pred HhhhCCCCEEEECCCCCCCCCCChhhHH--------------------HHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 81 RDCIQGSTAVVNLAGTPIGTRWSSEIKK--------------------EIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 81 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~--------------------~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
.++++++|+||..++.... .....+ ....-|+...+.+++.+++. ....++...
T Consensus 97 ~eal~~AD~VViaag~~~~---~g~~rd~~ip~k~g~~~~eT~G~ggl~~~~rni~i~~~i~~~i~~~--~P~A~ii~~ 170 (472)
T 1u8x_X 97 EEAFTDVDFVMAHIRVGKY---AMRALDEQIPLKYGVVGQETCGPGGIAYGMRSIGGVLEILDYMEKY--SPDAWMLNY 170 (472)
T ss_dssp HHHHSSCSEEEECCCTTHH---HHHHHHHHHHHTTTCCCCSSSHHHHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEEC
T ss_pred HHHHcCCCEEEEcCCCccc---cccchhhhhhhhcCcccccccCchhHHHHhhhHHHHHHHHHHHHHH--CCCeEEEEe
Confidence 7788999999999985311 111111 11345677788888888884 333444443
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00011 Score=61.46 Aligned_cols=77 Identities=19% Similarity=0.163 Sum_probs=55.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc-ccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR-FFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~-~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++++|+|+ |.+|+.++..|.+.|. +|++++|+.++...+....... ....+...+.+++.+.++++|+||++...
T Consensus 126 ~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNATPM 204 (283)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECSST
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECCCC
Confidence 4569999997 8999999999999998 7999999877654432211000 00123344556777888899999999864
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0001 Score=63.07 Aligned_cols=73 Identities=15% Similarity=0.038 Sum_probs=50.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh---hh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---~~--~~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.+...|.+|+++++++++......... ...+|..+.+...+ .. +++|+||+++
T Consensus 141 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 217 (325)
T 3jyn_A 141 GEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKALGA---WETIDYSHEDVAKRVLELTDGKKCPVVYDGV 217 (325)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCC---CEEEeCCCccHHHHHHHHhCCCCceEEEECC
Confidence 3589999999999999999998889999999997765443322111 11234444443333 22 2699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 218 g 218 (325)
T 3jyn_A 218 G 218 (325)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00018 Score=62.02 Aligned_cols=73 Identities=18% Similarity=0.181 Sum_probs=51.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHh---hh--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD---CI--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~---~~--~~~d~vi~~a 94 (325)
..+|+|+||+|-+|...++.+...|.+|+++++++++......... ...+|..+.+...+ .. .++|+||+|+
T Consensus 145 g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lga---~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~ 221 (340)
T 3gms_A 145 NDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLRLGA---AYVIDTSTAPLYETVMELTNGIGADAAIDSI 221 (340)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEESS
T ss_pred CCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhCCC---cEEEeCCcccHHHHHHHHhCCCCCcEEEECC
Confidence 3589999999999999999888889999999998876544332211 11234444443332 22 2699999999
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 222 g 222 (340)
T 3gms_A 222 G 222 (340)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00019 Score=63.36 Aligned_cols=75 Identities=16% Similarity=0.223 Sum_probs=51.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc---------eeecCCchhHhhhCCCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG---------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~---------~d~~d~~~~~~~~~~~d~ 89 (325)
.+|||.|+| +|++|..++..|++ |++|++++|++++...+.........+. ..+.-.+++.++++++|+
T Consensus 35 ~~mkIaVIG-lG~mG~~lA~~La~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~ea~~~aDv 112 (432)
T 3pid_A 35 EFMKITISG-TGYVGLSNGVLIAQ-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKHDAYRNADY 112 (432)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHT-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHHHTTCSE
T ss_pred CCCEEEEEC-cCHHHHHHHHHHHc-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHHHHHhCCCE
Confidence 457999999 69999999999887 9999999998876554433210000000 012222355677889999
Q ss_pred EEECCC
Q 020476 90 VVNLAG 95 (325)
Q Consensus 90 vi~~a~ 95 (325)
||-+..
T Consensus 113 ViiaVP 118 (432)
T 3pid_A 113 VIIATP 118 (432)
T ss_dssp EEECCC
T ss_pred EEEeCC
Confidence 999865
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00038 Score=57.11 Aligned_cols=66 Identities=20% Similarity=0.210 Sum_probs=51.5
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
+++|+|+ |..|++++..|++.|. +|+++.|+.++...+.... .....+++.+.++++|+||++...
T Consensus 110 ~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~--------~~~~~~~~~~~~~~aDiVInatp~ 176 (253)
T 3u62_A 110 PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPV--------KIFSLDQLDEVVKKAKSLFNTTSV 176 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSC--------EEEEGGGHHHHHHTCSEEEECSST
T ss_pred eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc--------ccCCHHHHHhhhcCCCEEEECCCC
Confidence 8999995 9999999999999998 8999999887766554431 112334566777899999998753
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0012 Score=57.09 Aligned_cols=102 Identities=11% Similarity=0.133 Sum_probs=66.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-----eEEEEecCCCcc--------cccCCCCCccccCceeecCCchhHhhhCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-----QVRVLTRSRSKA--------ELIFPGKKTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-----~V~~~~r~~~~~--------~~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
++||.|+||+|.||.+++-.|+..+. .+.....+.+.. -.+..... .....+.+. +...+.+++
T Consensus 32 ~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h~~~-p~~~~v~i~--~~~y~~~~d 108 (375)
T 7mdh_A 32 LVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSLY-PLLREVSIG--IDPYEVFED 108 (375)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTC-TTEEEEEEE--SCHHHHTTT
T ss_pred CCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHhhhh-hhcCCcEEe--cCCHHHhCC
Confidence 35899999999999999999988753 266554433221 01111100 001123332 233567899
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+|+||-.||.+. -......++.+.|+.-.+.+.+.+.+
T Consensus 109 aDvVVitag~pr---kpG~tR~DLl~~N~~I~k~i~~~i~~ 146 (375)
T 7mdh_A 109 VDWALLIGAKPR---GPGMERAALLDINGQIFADQGKALNA 146 (375)
T ss_dssp CSEEEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEcCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998652 23345678889999999999998887
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00017 Score=60.88 Aligned_cols=67 Identities=16% Similarity=0.280 Sum_probs=52.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.|+||-++| .|..|..+++.|++.||+|++++|++++...+.... +. -.++..++++++|+||-|-.
T Consensus 2 ~M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~~G-------a~--~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 2 HMKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG-------AS--AARSARDAVQGADVVISMLP 68 (300)
T ss_dssp -CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT-------CE--ECSSHHHHHTTCSEEEECCS
T ss_pred CcCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHHcC-------CE--EcCCHHHHHhcCCceeecCC
Confidence 467999999 899999999999999999999999987766544321 11 23456677888999998864
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00035 Score=58.23 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=53.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |.+|+.+++.|.+.|.+|++++|++++...+.... +++..+ .+.++++++|+||++....
T Consensus 128 ~~~~v~iiGa-G~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~------g~~~~~--~~~~~~~~aDiVi~atp~~ 197 (275)
T 2hk9_A 128 KEKSILVLGA-GGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKF------PLEVVN--SPEEVIDKVQVIVNTTSVG 197 (275)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTS------CEEECS--CGGGTGGGCSEEEECSSTT
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHc------CCeeeh--hHHhhhcCCCEEEEeCCCC
Confidence 4579999995 99999999999999999999999876655444321 234332 4556778999999998753
|
| >2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00049 Score=57.49 Aligned_cols=68 Identities=10% Similarity=0.060 Sum_probs=48.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-CCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a~ 95 (325)
||||.|+| .|.+|..+++.|.+.|+ +|++++|++++......... . ... .+++.++++ ++|+||-+..
T Consensus 1 m~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---~--~~~--~~~~~~~~~~~aDvVilavp 71 (281)
T 2g5c_A 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI---I--DEG--TTSIAKVEDFSPDFVMLSSP 71 (281)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS---C--SEE--ESCGGGGGGTCCSEEEECSC
T ss_pred CcEEEEEe-cCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHCCC---c--ccc--cCCHHHHhcCCCCEEEEcCC
Confidence 47999999 79999999999999998 99999988755433221110 0 001 123445677 9999999864
|
| >3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00022 Score=59.63 Aligned_cols=67 Identities=22% Similarity=0.261 Sum_probs=51.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
++|||.|+|+ |.+|..+++.|++.|+ +|++.+|++++........ ++.. .++..++++++|+||-+.
T Consensus 2 ~~~~I~iIG~-G~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~~------gi~~--~~~~~~~~~~aDvVilav 71 (280)
T 3tri_A 2 NTSNITFIGG-GNMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEKC------GVHT--TQDNRQGALNADVVVLAV 71 (280)
T ss_dssp CCSCEEEESC-SHHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHTT------CCEE--ESCHHHHHSSCSEEEECS
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHHc------CCEE--eCChHHHHhcCCeEEEEe
Confidence 3579999995 9999999999999998 9999999887655443321 1222 234556778999999986
|
| >1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00037 Score=59.86 Aligned_cols=74 Identities=26% Similarity=0.354 Sum_probs=51.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEec--CCCcccccCCCCCcccc----CceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR--SRSKAELIFPGKKTRFF----PGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r--~~~~~~~~~~~~~~~~~----~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|+ |.+|..++..|.+.|++|++++| +++.............. ..+...+.++..++++++|+||-+.
T Consensus 1 m~I~iiG~-G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~D~vi~~v 79 (335)
T 1txg_A 1 MIVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (335)
T ss_dssp CEEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHHHhcCCEEEEcC
Confidence 68999995 99999999999999999999999 76554433322110000 1123334335666778999999987
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 80 ~ 80 (335)
T 1txg_A 80 S 80 (335)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2yv3_A Aspartate-semialdehyde dehydrogenase; aspartate pathway, structural genomics; 2.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00048 Score=58.84 Aligned_cols=27 Identities=44% Similarity=0.738 Sum_probs=24.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQV 47 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V 47 (325)
|||.|.||+|++|+.+++.|.++++++
T Consensus 1 mkVaI~GAtG~iG~~llr~L~~~~~~~ 27 (331)
T 2yv3_A 1 MRVAVVGATGAVGREILKVLEARNFPL 27 (331)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCc
Confidence 589999999999999999999777654
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0012 Score=55.68 Aligned_cols=101 Identities=16% Similarity=0.151 Sum_probs=66.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++||.|+|| |.+|..++..|+..|. +|.+++++++.......... .....+... .++ +.++++|+||.+++.
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~~~g~a~dl~~-~~~~~i~~t--~d~-~~l~~aD~Vi~aag~ 87 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEGTKGATMDLEI-FNLPNVEIS--KDL-SASAHSKVVIFTVNS 87 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC-----CHHHHHH-HTCTTEEEE--SCG-GGGTTCSEEEECCCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcchHHHHHHHhh-hcCCCeEEe--CCH-HHHCCCCEEEEcCCC
Confidence 3579999996 9999999999999888 99999997741101000000 001123332 234 668999999999986
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
.. ......++...|+...+.+++.+.+.
T Consensus 88 ~~----pG~tR~dl~~~n~~i~~~i~~~i~~~ 115 (303)
T 2i6t_A 88 LG----SSQSYLDVVQSNVDMFRALVPALGHY 115 (303)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 41 22345667778999999999988874
|
| >2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00086 Score=53.37 Aligned_cols=53 Identities=15% Similarity=0.223 Sum_probs=41.3
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+....+|+|.|+| .|.+|+.+++.|.+.|++|++++|+++ .++++|+||-+.
T Consensus 14 ~~~~~~~~I~iiG-~G~mG~~la~~l~~~g~~V~~~~~~~~---------------------------~~~~aD~vi~av 65 (209)
T 2raf_A 14 NLYFQGMEITIFG-KGNMGQAIGHNFEIAGHEVTYYGSKDQ---------------------------ATTLGEIVIMAV 65 (209)
T ss_dssp ------CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECTTCC---------------------------CSSCCSEEEECS
T ss_pred ccccCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEcCCHH---------------------------HhccCCEEEEcC
Confidence 3455678999999 799999999999999999999988653 456899999886
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 66 ~ 66 (209)
T 2raf_A 66 P 66 (209)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00012 Score=60.86 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=49.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-CCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-~~~d~vi~~a~~~ 97 (325)
..++++|+|+ |.+|+.++..|++.|.+|+++.|+.++...+...... ...++..+.+ ++. .++|+||++++..
T Consensus 118 ~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~--~~~~~~~~~~---~~~~~~~DivIn~t~~~ 191 (272)
T 1p77_A 118 PNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQP--YGNIQAVSMD---SIPLQTYDLVINATSAG 191 (272)
T ss_dssp TTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGG--GSCEEEEEGG---GCCCSCCSEEEECCCC-
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccc--cCCeEEeeHH---HhccCCCCEEEECCCCC
Confidence 3579999997 7899999999999999999999987655443221100 0012222222 222 3899999999853
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0001 Score=61.91 Aligned_cols=74 Identities=20% Similarity=0.251 Sum_probs=50.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCc----cccCceeecCCchhHhhhCCCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKT----RFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~----~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
..++++|+|+ |.+|+++++.|++.| +|++.+|+.++...+...... .....+|+.+ +.+.+.++|+||+++
T Consensus 127 ~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a 201 (287)
T 1nvt_A 127 KDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT 201 (287)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence 4578999997 599999999999999 999999986554333211000 0001245544 245567899999999
Q ss_pred CCC
Q 020476 95 GTP 97 (325)
Q Consensus 95 ~~~ 97 (325)
+..
T Consensus 202 g~~ 204 (287)
T 1nvt_A 202 PIG 204 (287)
T ss_dssp CTT
T ss_pred CCC
Confidence 864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.00011 Score=65.87 Aligned_cols=75 Identities=13% Similarity=0.244 Sum_probs=57.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
..|||+|.|+ |-+|+++++.|.+.||+|++++++++....+...... ....+|-.+++.+.++ ++++|.+|-+.+
T Consensus 2 ~~M~iiI~G~-G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~-~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~ 77 (461)
T 4g65_A 2 NAMKIIILGA-GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDL-RVVNGHASHPDVLHEAGAQDADMLVAVTN 77 (461)
T ss_dssp CCEEEEEECC-SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSC-EEEESCTTCHHHHHHHTTTTCSEEEECCS
T ss_pred CcCEEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCc-EEEEEcCCCHHHHHhcCCCcCCEEEEEcC
Confidence 4589999995 9999999999999999999999988765544322110 1334677788888876 578999997654
|
| >2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.15 E-value=0.00022 Score=60.79 Aligned_cols=66 Identities=18% Similarity=0.326 Sum_probs=49.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+| .|.+|..+++.|.+.|++|++++|++++....... ++... ++..++++++|+||-+..
T Consensus 30 ~~~I~iIG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~~--~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 30 DKKIGFLG-LGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLFIQE-------GARLG--RTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSGGGGHHHHHT-------TCEEC--SCHHHHHHHCSEEEECCS
T ss_pred CCeEEEEc-ccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHc-------CCEEc--CCHHHHHhcCCEEEEeCC
Confidence 47999999 59999999999999999999999987665433221 11221 234556678999998864
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.00019 Score=60.75 Aligned_cols=77 Identities=18% Similarity=0.204 Sum_probs=52.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC---CCcccccCCCCCccc---cCceeecCCchhHhhhCCCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS---RSKAELIFPGKKTRF---FPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~---~~~~~~~~~~~~~~~---~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
..++++|+|+ |.+|+.++..|.+.|. +|+++.|+ .++...+........ ...+++.+.+.+.+.+.++|+||
T Consensus 153 ~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~~aDiII 231 (315)
T 3tnl_A 153 IGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFT 231 (315)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEEE
T ss_pred cCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhcCCCEEE
Confidence 4569999997 8999999999999998 89999998 333332211100000 01123334456777788999999
Q ss_pred ECCCC
Q 020476 92 NLAGT 96 (325)
Q Consensus 92 ~~a~~ 96 (325)
++...
T Consensus 232 NaTp~ 236 (315)
T 3tnl_A 232 NATGV 236 (315)
T ss_dssp ECSST
T ss_pred ECccC
Confidence 99864
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.13 E-value=0.00025 Score=62.60 Aligned_cols=72 Identities=25% Similarity=0.270 Sum_probs=53.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|+|+|+ |.+|..+++.|...|. +|++++|+..+...+... .+++..+.+.+.+++.++|+||.+.+..
T Consensus 166 ~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~------~g~~~~~~~~l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 166 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD------LGGEAVRFDELVDHLARSDVVVSATAAP 238 (404)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH------HTCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred cCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHH------cCCceecHHhHHHHhcCCCEEEEccCCC
Confidence 4579999997 9999999999999898 999999987654222111 1133444456777788999999998743
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00065 Score=57.49 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=67.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcc---ccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTR---FFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~---~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
||.|+|| |.+|..++..|+..+. +|.++++++++........... ......+....+. +.++++|+||.+++.+
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t~d~-~a~~~aD~Vi~~ag~~ 78 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGSNSY-EDMRGSDIVLVTAGIG 78 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEESCG-GGGTTCSEEEECCSCC
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEECCCH-HHhCCCCEEEEeCCCC
Confidence 6899998 9999999999888777 7999999876543211000000 0001222221233 5789999999999875
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
... .....++...|+...+.+++.+.+.
T Consensus 79 ~k~---G~~r~dl~~~n~~i~~~i~~~i~~~ 106 (308)
T 2d4a_B 79 RKP---GMTREQLLEANANTMADLAEKIKAY 106 (308)
T ss_dssp CCS---SCCTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCC---CCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 322 2234566778999999999998874
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00048 Score=58.19 Aligned_cols=70 Identities=19% Similarity=0.224 Sum_probs=52.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|+|+|+ |.+|+.+++.|...|.+|++++|++++....... +++..+.+.+.++++++|+|+.+...
T Consensus 156 ~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 156 HGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARITEM-------GLVPFHTDELKEHVKDIDICINTIPS 225 (300)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TCEEEEGGGHHHHSTTCSEEEECCSS
T ss_pred CCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHC-------CCeEEchhhHHHHhhCCCEEEECCCh
Confidence 3579999995 9999999999999999999999987543321111 12333345678888999999999763
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00033 Score=60.42 Aligned_cols=73 Identities=23% Similarity=0.200 Sum_probs=49.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCc---hhHhhhC--CCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~---~~~~~~~--~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.+...|.+|+++++++++......... ...+|.. .+ .+.++.. ++|+||+++
T Consensus 160 g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~ga---~~v~~~~-~~~~~~v~~~~~~~g~Dvvid~~ 235 (342)
T 4eye_A 160 GETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKSVGA---DIVLPLE-EGWAKAVREATGGAGVDMVVDPI 235 (342)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEESS-TTHHHHHHHHTTTSCEEEEEESC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC---cEEecCc-hhHHHHHHHHhCCCCceEEEECC
Confidence 3589999999999999999999999999999998766443322111 1112222 22 2222222 699999999
Q ss_pred CC
Q 020476 95 GT 96 (325)
Q Consensus 95 ~~ 96 (325)
|.
T Consensus 236 g~ 237 (342)
T 4eye_A 236 GG 237 (342)
T ss_dssp C-
T ss_pred ch
Confidence 83
|
| >4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00092 Score=60.03 Aligned_cols=72 Identities=14% Similarity=0.279 Sum_probs=49.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee---cCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI---AEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~---~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|+|.|+| .|.+|..+++.|++.|++|++.+|++++...+..... ....+ .+.+.+.+.++++|+||-+..
T Consensus 3 ~~~kIgiIG-lG~MG~~lA~~L~~~G~~V~v~dr~~~~~~~l~~~g~----~g~~i~~~~s~~e~v~~l~~aDvVil~Vp 77 (484)
T 4gwg_A 3 AQADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEA----KGTKVVGAQSLKEMVSKLKKPRRIILLVK 77 (484)
T ss_dssp CCBSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTT----TTSSCEECSSHHHHHHTBCSSCEEEECSC
T ss_pred CCCEEEEEC-hhHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhccc----CCCceeccCCHHHHHhhccCCCEEEEecC
Confidence 457999999 6999999999999999999999999877655432210 01112 133333333346898888764
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.09 E-value=0.00068 Score=58.32 Aligned_cols=73 Identities=23% Similarity=0.093 Sum_probs=49.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~~~~d~vi~~a~~ 96 (325)
..+|||+|| |-+|..+++.+...|.+|++++|++++......... ...+|..+.+. +.++..++|+||+++|.
T Consensus 165 g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~lGa---~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~ 240 (339)
T 1rjw_A 165 GEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAVS 240 (339)
T ss_dssp TCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSCC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCC---CEEecCCCccHHHHHHHHhCCCCEEEECCCC
Confidence 458999999 669999999999899999999998765443322111 11134433332 22222579999999873
|
| >2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0035 Score=46.53 Aligned_cols=61 Identities=15% Similarity=0.050 Sum_probs=42.1
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.++|+|+|++ |.+|..+++.|.+.|++|+.+..+. .. ..+.... .++.++...+|.++-+.
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~---~~---------i~G~~~y--~sl~~l~~~vDlvvi~v 85 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKY---EE---------VLGRKCY--PSVLDIPDKIEVVDLFV 85 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTC---SE---------ETTEECB--SSGGGCSSCCSEEEECS
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCC---Ce---------ECCeecc--CCHHHcCCCCCEEEEEe
Confidence 4689999998 8999999999999999866664332 11 1122222 23444455799999875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.07 E-value=0.00029 Score=60.95 Aligned_cols=72 Identities=24% Similarity=0.142 Sum_probs=48.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCch---hHhhh--CCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ---WRDCI--QGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~---~~~~~--~~~d~vi~~ 93 (325)
..+|||+|+ |-+|...++.+...|. +|++++|++++......... ...+|..+.+. +.++. +++|+||++
T Consensus 168 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~~Ga---~~~~~~~~~~~~~~v~~~~~g~g~D~vid~ 243 (348)
T 2d8a_A 168 GKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGA---DYVINPFEEDVVKEVMDITDGNGVDVFLEF 243 (348)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHTC---SEEECTTTSCHHHHHHHHTTTSCEEEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCC---CEEECCCCcCHHHHHHHHcCCCCCCEEEEC
Confidence 358999999 9999999999988998 99999998655433222111 11133333332 22222 269999999
Q ss_pred CC
Q 020476 94 AG 95 (325)
Q Consensus 94 a~ 95 (325)
++
T Consensus 244 ~g 245 (348)
T 2d8a_A 244 SG 245 (348)
T ss_dssp SC
T ss_pred CC
Confidence 87
|
| >1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00083 Score=57.54 Aligned_cols=74 Identities=14% Similarity=0.153 Sum_probs=44.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCcccc-CceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFF-PGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~-~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
|.||.|+||||++|..|++.|.++.+ ++..+.-..+..+....... .+ ....+.+.+ ..++.+++|+||.|++.
T Consensus 13 ~~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG~~~~~~~p--~~~~~l~~~~~~-~~~~~~~~Dvvf~alp~ 88 (351)
T 1vkn_A 13 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFP--STLENSILSEFD-PEKVSKNCDVLFTALPA 88 (351)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCG--GGCCCCBCBCCC-HHHHHHHCSEEEECCST
T ss_pred eeEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCcccccCChHHhCh--hhccCceEEeCC-HHHhhcCCCEEEECCCc
Confidence 45999999999999999999998864 77776643322222211000 00 112222222 22334679999999863
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00077 Score=58.51 Aligned_cols=73 Identities=21% Similarity=0.079 Sum_probs=50.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~~~~d~vi~~a~~ 96 (325)
..+|||+|+ |-+|...++.+...|.+|+++++++.+.+....... ...+|..+. +...++..++|+||++++.
T Consensus 180 g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~lGa---~~v~~~~~~~~~~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 180 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS 253 (360)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHcCC---CEEEcCcCchHHHHHhhcCCCEEEECCCC
Confidence 358999999 999999999888889999999998876543322111 112344344 3333333589999999974
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.00031 Score=59.39 Aligned_cols=66 Identities=11% Similarity=0.177 Sum_probs=49.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+| .|.+|..+++.|.+.|++|++++|++++....... ++.. .++..++++++|+||.+..
T Consensus 4 ~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~--~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 4 SIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVAQ-------GAQA--CENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHTT-------TCEE--CSSHHHHHHHCSEEEECCS
T ss_pred CCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHC-------CCee--cCCHHHHHhCCCEEEEECC
Confidence 47999999 69999999999999999999999987654443322 1221 2345566678999998864
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.00062 Score=57.27 Aligned_cols=69 Identities=17% Similarity=0.164 Sum_probs=52.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++|+|+| .|.+|+.+++.|...|.+|++++|++.+....... +++..+.+.+.++++++|+|+.+..
T Consensus 154 ~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------g~~~~~~~~l~~~l~~aDvVi~~~p 222 (293)
T 3d4o_A 154 HGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAEM-------GMEPFHISKAAQELRDVDVCINTIP 222 (293)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT-------TSEEEEGGGHHHHTTTCSEEEECCS
T ss_pred CCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHC-------CCeecChhhHHHHhcCCCEEEECCC
Confidence 357999999 69999999999999999999999987543221111 1233344567788899999999875
|
| >3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0009 Score=56.16 Aligned_cols=69 Identities=13% Similarity=0.218 Sum_probs=47.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|||.|+| .|.+|..+++.|.+. +++|++++|++++......... .. .. ..++.++++++|+||-+..
T Consensus 5 ~~~~I~iIG-~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~---~~--~~--~~~~~~~~~~aDvVilavp 75 (290)
T 3b1f_A 5 EEKTIYIAG-LGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGI---VD--EA--TADFKVFAALADVIILAVP 75 (290)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTS---CS--EE--ESCTTTTGGGCSEEEECSC
T ss_pred ccceEEEEe-eCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCC---cc--cc--cCCHHHhhcCCCEEEEcCC
Confidence 357999999 799999999999987 6799999998765433222110 00 11 1123445678999999864
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00078 Score=55.55 Aligned_cols=65 Identities=22% Similarity=0.199 Sum_probs=48.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++++|+|+ |..|+.++..|.+.|.+|+++.|+.++...+. ... +.....+++ .++|+||++...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~------~~~~~~~~l----~~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLG------CDCFMEPPK----SAFDLIINATSA 182 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHT------CEEESSCCS----SCCSEEEECCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCC------CeEecHHHh----ccCCEEEEcccC
Confidence 579999995 99999999999999999999999988765543 110 222222222 289999999764
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.00058 Score=56.61 Aligned_cols=72 Identities=18% Similarity=0.122 Sum_probs=50.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++++|+|+ |.+|+.++..|.+.|. +|+++.|+.++...+..... ...+...+.+++.. .++|+||++...
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~---~~~~~~~~~~~l~~--~~~DivInaTp~ 191 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD---HSRLRISRYEALEG--QSFDIVVNATSA 191 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC---CTTEEEECSGGGTT--CCCSEEEECSSG
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc---cCCeeEeeHHHhcc--cCCCEEEECCCC
Confidence 3568999996 8899999999999995 99999998776544332111 01133334444432 689999999764
|
| >1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.99 E-value=0.0015 Score=56.02 Aligned_cols=67 Identities=21% Similarity=0.205 Sum_probs=48.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|+|.|+| .|.+|..+++.|.+.|++|++.+|+++....... ..+++.. ++.++++++|+||-+..
T Consensus 15 ~~~~I~IIG-~G~mG~alA~~L~~~G~~V~~~~~~~~~~~~~a~------~~G~~~~---~~~e~~~~aDvVilavp 81 (338)
T 1np3_A 15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE------AHGLKVA---DVKTAVAAADVVMILTP 81 (338)
T ss_dssp HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH------HTTCEEE---CHHHHHHTCSEEEECSC
T ss_pred cCCEEEEEC-chHHHHHHHHHHHHCcCEEEEEECChHHHHHHHH------HCCCEEc---cHHHHHhcCCEEEEeCC
Confidence 357999999 6999999999999999999999998754221111 0122332 45567789999999864
|
| >3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A | Back alignment and structure |
|---|
Probab=96.99 E-value=0.00043 Score=60.51 Aligned_cols=69 Identities=19% Similarity=0.144 Sum_probs=51.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+++|+|+| .|.+|+.+++.+.+.|++|++++..+......... .....+..|.+.+.++++++|+|..
T Consensus 11 ~~~~IlIlG-~G~lg~~la~aa~~lG~~viv~d~~~~~p~~~~ad----~~~~~~~~d~~~l~~~~~~~dvi~~ 79 (377)
T 3orq_A 11 FGATIGIIG-GGQLGKMMAQSAQKMGYKVVVLDPSEDCPCRYVAH----EFIQAKYDDEKALNQLGQKCDVITY 79 (377)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCTTCTTGGGSS----EEEECCTTCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCCCChhhhhCC----EEEECCCCCHHHHHHHHHhCCccee
Confidence 356899999 59999999999999999999998766532211111 1233566788888888888998854
|
| >2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.00042 Score=58.39 Aligned_cols=65 Identities=12% Similarity=0.198 Sum_probs=48.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|..+++.|.+.|++|++++|++++....... ++... ++..++++++|+||-+..
T Consensus 1 m~i~iiG-~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~-------g~~~~--~~~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIG-LGNMGNPMAKNLMKHGYPLIIYDVFPDACKEFQDA-------GEQVV--SSPADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHTTCCEEEECSSTHHHHHHHTT-------TCEEC--SSHHHHHHHCSEEEECCS
T ss_pred CeEEEEe-ccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc-------CCeec--CCHHHHHhcCCEEEEeCC
Confidence 5899999 69999999999999999999999987665443322 12221 234556678899998863
|
| >2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0018 Score=48.23 Aligned_cols=62 Identities=15% Similarity=0.079 Sum_probs=43.6
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCC--CcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSR--SKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~--~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+++|.|+|++ |.+|..+++.|++.|++|+.+.++. ... .+.... .++.++...+|+++-+.
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L~~~G~~v~~vnp~~~g~~i------------~G~~~~--~sl~el~~~~Dlvii~v 78 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYLLDQGYHVIPVSPKVAGKTL------------LGQQGY--ATLADVPEKVDMVDVFR 78 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHHHHHTCCEEEECSSSTTSEE------------TTEECC--SSTTTCSSCCSEEECCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHHHHCCCEEEEeCCccccccc------------CCeecc--CCHHHcCCCCCEEEEEe
Confidence 4689999998 8999999999999999987776654 221 112222 23334446899999875
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 79 p 79 (145)
T 2duw_A 79 N 79 (145)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.00019 Score=62.53 Aligned_cols=73 Identities=19% Similarity=0.281 Sum_probs=47.9
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCcee----ecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGVM----IAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~d----~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+|+ |.+|..++..|++.|++|++++|+++....+....... ...+.. +.-.++..++++++|+||-+..
T Consensus 17 kI~iIG~-G~mG~~la~~L~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav~ 94 (366)
T 1evy_A 17 KAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIP 94 (366)
T ss_dssp EEEEECC-SHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECCC
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCcccccccccccccceeeeCCHHHHHcCCCEEEECCC
Confidence 9999995 99999999999999999999999865543322110000 001111 1111345566788999998863
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0017 Score=56.30 Aligned_cols=73 Identities=18% Similarity=0.158 Sum_probs=52.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+|+|+|+ |-+|...++.+...|.+|+++++++++..... .... ...+|..+.+.+.++..++|+||+++|.
T Consensus 181 g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa---~~vi~~~~~~~~~~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 181 GLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGA---DDYVIGSDQAKMSELADSLDYVIDTVPV 254 (357)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCC---SCEEETTCHHHHHHSTTTEEEEEECCCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCC---ceeeccccHHHHHHhcCCCCEEEECCCC
Confidence 358999995 99999999988888999999999887654333 2211 1123444445555555689999999984
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0054 Score=50.15 Aligned_cols=34 Identities=21% Similarity=0.237 Sum_probs=30.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
.++|+|+|+ |-+|+++++.|++.|. +|++++++.
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 469999995 8999999999999996 899999876
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 325 | ||||
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-20 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 2e-19 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-18 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 5e-18 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-16 | |
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 4e-16 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 4e-15 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 1e-13 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 9e-13 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 1e-12 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-12 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 1e-12 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 2e-11 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-10 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 8e-10 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 2e-09 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 2e-09 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 6e-09 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 8e-08 | |
| d2blla1 | 342 | c.2.1.2 (A:316-657) Polymyxin resistance protein A | 4e-07 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 4e-07 | |
| d1vl0a_ | 281 | c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD | 8e-07 | |
| d1n2sa_ | 298 | c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reduct | 3e-06 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 4e-06 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 4e-06 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 7e-06 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 9e-06 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 2e-05 | |
| d1gy8a_ | 383 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 3e-05 | |
| d2hjsa1 | 144 | c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog | 3e-04 | |
| d1eq2a_ | 307 | c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimer | 3e-04 | |
| d1e5qa1 | 182 | c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase | 3e-04 | |
| d1mb4a1 | 147 | c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semiald | 5e-04 | |
| d2ag5a1 | 245 | c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR fami | 8e-04 | |
| d1jaya_ | 212 | c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase | 0.001 | |
| d1yo6a1 | 250 | c.2.1.2 (A:1-250) Putative carbonyl reductase snif | 0.003 |
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 86.8 bits (214), Expect = 5e-20
Identities = 54/270 (20%), Positives = 96/270 (35%), Gaps = 24/270 (8%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRV---------LTRSRSKAELIFPGKKTRF-FP 70
M + VTG GFIG V++L A + LT + ++A L R F
Sbjct: 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFV 60
Query: 71 GVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 130
I + ++G A+V+ A R + + + + + ++
Sbjct: 61 HGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVG 120
Query: 131 GVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLAL 187
+V + YG+ ++ + ESSP + Y ++ + A + + +
Sbjct: 121 -----RVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRI 175
Query: 188 IRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 242
R G K+IPLF+ + GG L G G W+H DD I L+
Sbjct: 176 TRCCNNYGP-YQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234
Query: 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRP 272
+ + + E+ L + LG
Sbjct: 235 RAGEIYHIGGGLELTNRELTGILLDSLGAD 264
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 83.7 bits (205), Expect = 2e-19
Identities = 38/259 (14%), Positives = 78/259 (30%), Gaps = 13/259 (5%)
Query: 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 77
A+ TV VTGA+G G+ + ++L+ + + RS G + F G + +
Sbjct: 1 ANLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDAD 60
Query: 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
QG A+V L + + K + I + + ++ + +
Sbjct: 61 SINPAF-QGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAA 119
Query: 138 VSATALGYYGTSETEVFDESSPSGNDYL-AEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
A + P + + + + +IR G +L K
Sbjct: 120 KVAGVKHIVVVGSMGGTNPDHPLNKLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDK 179
Query: 197 DGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG----VINGTA 252
+GG + + G Q + D+ + +AL + + +
Sbjct: 180 EGG-------VRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 232
Query: 253 PNPVRLAEMCDHLGNVLGR 271
+ V R
Sbjct: 233 GTSTPTKDFKALFSQVTSR 251
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 82.0 bits (202), Expect = 2e-18
Identities = 48/264 (18%), Positives = 92/264 (34%), Gaps = 25/264 (9%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTR-SRSKAELIFPGKKTRFFPGVMIAEEPQWRDC 83
+TG GF+G L +L D H+V V+ + + +
Sbjct: 6 ITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIG---HENFELINHDVVEPL 62
Query: 84 IQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143
+ +LA P + ++ T ++ L G R +L+++T+
Sbjct: 63 YIEVDQIYHLAS-PASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV--GAR--LLLASTS- 116
Query: 144 GYYGTSETEVFDESSPSGNDYL--------AEVCREWEGTALKVNKDVRLALIRIGIVLG 195
YG E E + + + E A + V + + RI G
Sbjct: 117 EVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFG 176
Query: 196 -KDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVIN 249
+ +++ F+ G PL GSG Q ++ ++ D+VN + + N + +N
Sbjct: 177 PRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALM-NSNVSSPVN 235
Query: 250 GTAPNPVRLAEMCDHLGNVLGRPS 273
P + E + N++G S
Sbjct: 236 LGNPEEHTILEFAQLIKNLVGSGS 259
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 81.2 bits (199), Expect = 5e-18
Identities = 44/296 (14%), Positives = 82/296 (27%), Gaps = 27/296 (9%)
Query: 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKKTRFFPGVMIAEE 77
+ T++V GATG G L++ A H VR S AE + F G ++
Sbjct: 3 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNV 62
Query: 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137
P +G+ + G + R ++ +
Sbjct: 63 PLMDTLFEGAHLAFINTTSQAGDEIAIGKDLADAAKRAGT--------------IQHYIY 108
Query: 138 VSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKD 197
S YG + +Y+ ++ V +
Sbjct: 109 SSMPDHSLYGPWPAVPMWAPKFTVENYVRQLGLPST--------FVYAGIYNNNFTSLPY 160
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRGVINGTAPNP 255
+++P P D+ + + + + G
Sbjct: 161 PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRIALTFET 220
Query: 256 VRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFP 310
+ ++C L R +++ VP+ +K + G LE VV K FP
Sbjct: 221 LSPVQVCAAFSRALNRRVTYVQVPKVEIKVNIPVGYREQLEAIEVVFGEHKAPYFP 276
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 76.7 bits (188), Expect = 2e-16
Identities = 44/278 (15%), Positives = 88/278 (31%), Gaps = 38/278 (13%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA------ELIFPGKKTRFFPGVMI 74
M + +TG GFIG +V+ + + V + A I + F I
Sbjct: 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHA-DI 59
Query: 75 AEEPQWRDCIQGS--TAVVNLAGTP-----------------IGTRWSSEIKKEIKESRI 115
+ + + AV++LA +GT E+ ++ +
Sbjct: 60 CDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALG 119
Query: 116 RVTSKVVDLINESPE---GVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREW 172
+ S + G P ++ +ET + SSP ++ +
Sbjct: 120 EDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYS---ASKASSDH 176
Query: 173 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFM--MFAGGPL---GSGQQWFSWIH 227
A + + + G K+IPL + G PL G G Q W++
Sbjct: 177 LVRAWRRTYGLPTIVTNCSNNYGP-YHFPEKLIPLVILNALEGKPLPIYGKGDQIRDWLY 235
Query: 228 LDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHL 265
++D ++ ++ N N + ++ +
Sbjct: 236 VEDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTI 273
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 73.5 bits (179), Expect = 4e-16
Identities = 29/228 (12%), Positives = 61/228 (26%), Gaps = 33/228 (14%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
+ +++ GATG G + + ++V VL R S+ P V+ A
Sbjct: 2 AVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAA-- 59
Query: 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138
+ G AV+ L GT + ++ + + + GV V
Sbjct: 60 DVDKTVAGQDAVIVLLGT----------RNDLSPTTVMSEGARNIVAAMKAHGVDKVVAC 109
Query: 139 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGKDG 198
++ + + + G + + +
Sbjct: 110 TSA--FLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVA--------VMPPHIGDQPL 159
Query: 199 GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG 246
+ G+ I D+ + + L+ Y G
Sbjct: 160 TGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDG 196
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 72.5 bits (176), Expect = 4e-15
Identities = 34/283 (12%), Positives = 81/283 (28%), Gaps = 36/283 (12%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGKKTRFFPGVM 73
V + G TG+IG+R+V + H VL R + + F +
Sbjct: 4 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEA-S 62
Query: 74 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
+ + + D ++ V++ + + E K ++ + K
Sbjct: 63 LDDHQRLVDALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAGNIKRF----------- 111
Query: 134 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIV 193
+ D + + + + + +
Sbjct: 112 ------------LPSEFGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMF 159
Query: 194 LGKDGGALAKMIPLFMMFAGGPL--GSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VIN 249
G G+LA++ M L G G W+ DD+ +++ +P +
Sbjct: 160 AGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYI 219
Query: 250 GTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 291
N + E+ + + + + A + + ++
Sbjct: 220 RPPMNILSQKEVIQIWERLSEQNLDKIYISSQDFLADMKDKSY 262
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 67.9 bits (164), Expect = 1e-13
Identities = 36/279 (12%), Positives = 77/279 (27%), Gaps = 29/279 (10%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFF--PGVMIAE 76
S+ + + GATG+IGR + + H +L R + + + F G I
Sbjct: 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVH 61
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
E + I ++ V +
Sbjct: 62 GSIDDHASLVEAVKNVDVVISTVGSLQIESQVNIIKAIKEVGTVK--------------- 106
Query: 137 LVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
+ SE ++ + + + + + + + G
Sbjct: 107 --------RFFPSEFGNDVDNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGY 158
Query: 197 DGGALAKMIPLFM-MFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG--VINGTAP 253
+LA+ LG G ++ +DI +A+ +P +
Sbjct: 159 FLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPA 218
Query: 254 NPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAF 291
N + L E+ + + VPE + ++ + F
Sbjct: 219 NTLSLNELVALWEKKIDKTLEKAYVPEEEVLKLIADTPF 257
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 66.0 bits (160), Expect = 9e-13
Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 27/326 (8%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS----------KAELIFPGKKTRFFPG 71
+TG TG G L + L ++V + R S + K G
Sbjct: 3 VALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYG 62
Query: 72 VMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEG 131
+ R + V G S E + + T ++++ I
Sbjct: 63 DLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLE 122
Query: 132 VRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALI 188
+ ++T+ YG + E++P + Y +A++ W + + +
Sbjct: 123 KKTRFYQASTS-ELYGLVQEIPQKETTPFYPRSPYAVAKLYAYWITVNYRESYGMYACNG 181
Query: 189 RIGIVLGKDGG---ALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALS 240
+ G K+ A G LG+ W H D V + + L
Sbjct: 182 ILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQ 241
Query: 241 NPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL----PVPEFALKAVLGEGAFVVLEG 296
+ T + + + LG + + +V G A V G
Sbjct: 242 QEQPEDFVIAT-GVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPG 300
Query: 297 QRVVPARAKELGFPFKYRYVKDALKA 322
++ + + D KA
Sbjct: 301 DVIIAVDPRYFRPAEVETLLGDPTKA 326
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.0 bits (157), Expect = 1e-12
Identities = 35/246 (14%), Positives = 69/246 (28%), Gaps = 19/246 (7%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTR-----SRSKAELIFPGKKTRFFPGVMIAE 76
+ VTG TG G L + L ++V L +R + + ++ G M
Sbjct: 2 SALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADA 61
Query: 77 EPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136
R I+ V S + +++ I + R
Sbjct: 62 CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQ 121
Query: 137 LVSATALGYYGTSETEVFDESSPSGND---YLAEVCREWEGTALKVNKDVRLALIRIGIV 193
++ +G + E DE++P +A++ W + + + + +
Sbjct: 122 ASTSE---MFGLIQAERQDENTPFYPRSPYGVAKLYGHWITVNYRESFGLHASSGILFNH 178
Query: 194 LG---KDGGALAKMIPLFMMFAGG-----PLGSGQQWFSWIHLDDIVNLIYEALSNPSYR 245
K+ G LG+ W D V ++ L
Sbjct: 179 ESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQDKAD 238
Query: 246 GVINGT 251
+ T
Sbjct: 239 DYVVAT 244
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 65.0 bits (157), Expect = 1e-12
Identities = 41/277 (14%), Positives = 74/277 (26%), Gaps = 25/277 (9%)
Query: 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKA-----ELIFPGKKTR 67
L A +TG GFIG L++ L + +V + L+ + +
Sbjct: 12 LPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN 71
Query: 68 FFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127
F + V S + I ++ +
Sbjct: 72 FKFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD 131
Query: 128 SPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDYLAEVCR-EWEGTALKVNKDVR 184
+ A + YG E + + Y E
Sbjct: 132 ----AKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFS 187
Query: 185 LALIRIGIVLGKDG---GALAKMIPLFM--MFAGGPL---GSGQQWFSWIHLDDIVNLIY 236
+R V G+ GA A +IP + M G + G G+ + ++++ V
Sbjct: 188 TIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANL 247
Query: 237 EALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGR 271
A + V N L ++ L + L
Sbjct: 248 LAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAE 284
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 65.2 bits (157), Expect = 1e-12
Identities = 44/334 (13%), Positives = 82/334 (24%), Gaps = 42/334 (12%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR 81
V VTGA GF+ +V++L ++VR RS SK + ++ A
Sbjct: 13 LVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDML 72
Query: 82 D--CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139
S E+ I T + +P R + S
Sbjct: 73 KQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132
Query: 140 ATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALK------VNKDVRLALIR---- 189
+ + ++ + + + + E K +K
Sbjct: 133 TVSALIPKPNVEGIYLDEKSWNLESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMD 192
Query: 190 ----------------IGIVLGKDGGALAKMIPLFMMFAGG--PLGSGQQWFSWIHLDDI 231
IG + + + + + +F G P + ++ DI
Sbjct: 193 ENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQYYVSAVDI 252
Query: 232 VNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAF 291
L L P + + P A +
Sbjct: 253 GLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLY--------PSKTFPADFPDQGQ 304
Query: 292 VVLEGQRVVPARA-KELGFPFKY---RYVKDALK 321
+ + K LG P +KD +
Sbjct: 305 DLSKFDTAPSLEILKSLGRPGWRSIEESIKDLVG 338
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 61.9 bits (149), Expect = 2e-11
Identities = 39/292 (13%), Positives = 80/292 (27%), Gaps = 23/292 (7%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRS-----------KAELIFPGKKTRFFPGVM 73
+TG TG G L + L ++V + R S K + G +
Sbjct: 6 ITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDL 65
Query: 74 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
+ + + G + S ++ + + T +++D +
Sbjct: 66 TDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINS 125
Query: 134 PSVLVSATALGYYGTSETEVFDESSPSG--NDY-LAEVCREWEGTALKVNKDVRLALIRI 190
++T+ YG + E++P + Y A++ W + ++ +
Sbjct: 126 VKFYQASTS-ELYGKVQEIPQKETTPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGIL 184
Query: 191 GIVLG---KDGGALAKMIPLFMMFAGGP-----LGSGQQWFSWIHLDDIVNLIYEALSNP 242
K+ G LG+ W H D V ++ L N
Sbjct: 185 FNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND 244
Query: 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVL 294
+ T + ++ W E + G V
Sbjct: 245 EPEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVT 296
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 59.6 bits (143), Expect = 1e-10
Identities = 49/288 (17%), Positives = 93/288 (32%), Gaps = 41/288 (14%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL------TRSRSKAELIFPGKKTRFFPG-VM 73
M V VTG +G+IG +L + H V +L RS GK F G +
Sbjct: 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIR 60
Query: 74 IAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR 133
V++ AG S + E ++ + T +++ + +
Sbjct: 61 NEALMTEILHDHAIDTVIHFAG-LKAVGESVQKPLEYYDNNVNGTLRLISAMRAA----N 115
Query: 134 PSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVN-----KDVRLALI 188
+ +++ YG + ES P+G + + + D +AL+
Sbjct: 116 VKNFIFSSSATVYGDQPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALL 175
Query: 189 RIGIVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFSWIH 227
R +G G ++P A G P G +IH
Sbjct: 176 RYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235
Query: 228 LDDIVNLIYEALSNPSYR---GVINGTAPNPVRLAEMCDHLGNVLGRP 272
+ D+ + A+ + + + N A + ++ + G+P
Sbjct: 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 56.9 bits (136), Expect = 8e-10
Identities = 38/278 (13%), Positives = 73/278 (26%), Gaps = 38/278 (13%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG----------------K 64
+ +S+TGA GFI + +RL+ + H V +++ K
Sbjct: 16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLK 75
Query: 65 KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDL 124
T V S V + + + E + R S
Sbjct: 76 VTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIY 135
Query: 125 INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVR 184
S+ + G L ++ E + +
Sbjct: 136 PEFKQLETTNV---------SLKESDAWPAEPQDAFG---LEKLATEELCKHYNKDFGIE 183
Query: 185 LALIRIGIVLGKDG---------GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235
+ R + G G A G G Q S+ +D+ V +
Sbjct: 184 CRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGV 243
Query: 236 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPS 273
+ +R +N + V + EM + + + +
Sbjct: 244 LRLTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKL 280
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 55.7 bits (133), Expect = 2e-09
Identities = 37/279 (13%), Positives = 79/279 (28%), Gaps = 48/279 (17%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI 84
+ G G +G + ++L+ VL R+R + L+ FF I
Sbjct: 7 IAGHRGMVGSAIRRQLEQRGDVELVL-RTRDELNLLDSRAVHDFFASERI---------- 55
Query: 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALG 144
V A G ++ + + + S ++ +++ V + + ++
Sbjct: 56 ---DQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQN--DVNKLLFLGSSC-- 108
Query: 145 YYGTSETEVFDESS-------PSGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGK 196
Y + ES P+ Y +A++ + + + G
Sbjct: 109 IYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGP 168
Query: 197 DGG----------ALAKMIPLFMMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPS 243
AL + + GSG ++H+DD+ +
Sbjct: 169 HDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASIHVMELAH 228
Query: 244 YR---------GVINGTAPNPVRLAEMCDHLGNVLGRPS 273
IN + E+ + V+G
Sbjct: 229 EVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 267
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 55.4 bits (132), Expect = 2e-09
Identities = 52/323 (16%), Positives = 94/323 (29%), Gaps = 33/323 (10%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRV-----LTRSRSKAEL-IFPGKKTRFFPGVMI 74
+ VTG GFIG V + ++ V V LT + +KA L G + G I
Sbjct: 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVG-DI 61
Query: 75 AEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP 134
A+ + A+V+ A S + T L +R
Sbjct: 62 ADAELVDKLAAKADAIVHYA-AESHNDNSLNDPSPFIHTNFIGT--YTLLEAARKYDIRF 118
Query: 135 SVLVSATALGYYGTSET---------EVFDESSPSG--NDY-LAEVCREWEGTALKVNKD 182
+ + G E E F + + Y + + A +
Sbjct: 119 HHVSTDEVYGDLPLREDLPGHGEGPGEKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFG 178
Query: 183 VRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHLDDIVNLIYEA 238
V+ + G + G G G+ WIH +D ++
Sbjct: 179 VKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAI 238
Query: 239 LSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQR 298
L+ A E+ + + +G+P + G ++ +
Sbjct: 239 LTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDH---VTDRAGHDLRYAIDASK 295
Query: 299 VVPARAKELGFPFKYRYVKDALK 321
R ELG+ ++ + L+
Sbjct: 296 ---LR-DELGWTPQFTDFSEGLE 314
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 53.2 bits (126), Expect = 6e-09
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56
+ V + GATG G L+ R+ ++ +V+ +R
Sbjct: 1 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKA 38
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 50.2 bits (118), Expect = 8e-08
Identities = 27/230 (11%), Positives = 59/230 (25%), Gaps = 25/230 (10%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
+V + GA+G GR L++ + +V R K K V +
Sbjct: 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLD 72
Query: 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138
+ QG GT G + + ++ ++
Sbjct: 73 DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAK---------------- 116
Query: 139 SATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTALKVNKDVRLALI-RIGIVLGKD 197
G + + + + E A + R G++L
Sbjct: 117 ------AGGCKHFNLLSSKGADKSSNFLYLQVKGEVEAKVEELKFDRYSVFRPGVLLCD- 169
Query: 198 GGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRGV 247
++ + G L + + +V + + P + +
Sbjct: 170 -RQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPRDKQM 218
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Score = 48.8 bits (114), Expect = 4e-07
Identities = 15/52 (28%), Positives = 20/52 (38%), Gaps = 1/52 (1%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPG 71
M V + G GFIG L +RL ++H +V L F G
Sbjct: 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEG 52
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.5 bits (114), Expect = 4e-07
Identities = 39/291 (13%), Positives = 74/291 (25%), Gaps = 39/291 (13%)
Query: 21 MT--VSVTGATGFIGRRLVQRLQADNHQVRVL-------TRSRSKAELI-----FPGKKT 66
M V VTG G+IG V L + V+ S E + G+
Sbjct: 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV 60
Query: 67 RFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLIN 126
F ++ + R + S V S + + + T ++++++
Sbjct: 61 EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMK 120
Query: 127 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTAL-KVNKDVRL 185
+ E + ++ E L + +K
Sbjct: 121 AHGVKNLVFSSSATVYGNPQYLPLDEAHPTGGCTNPYGKSKFFIEEMIRDLCQADKTWNA 180
Query: 186 ALIRIGIVLG---------KDGGALAKMIPLFMMFAGG------------PLGSGQQWFS 224
L+R G G ++P A G G
Sbjct: 181 VLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRD 240
Query: 225 WIHLDDIVN---LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP 272
+IH+ D+ L + N + +M + G+
Sbjct: 241 YIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKK 291
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} Length = 281 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Score = 47.5 bits (111), Expect = 8e-07
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53
M + +TGA G +GR + ++L+ N +V
Sbjct: 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Score = 45.7 bits (106), Expect = 3e-06
Identities = 8/35 (22%), Positives = 16/35 (45%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55
M + + G TG +G L + L + + + S+
Sbjct: 1 MNILLFGKTGQVGWELQRSLAPVGNLIALDVHSKE 35
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 45.5 bits (106), Expect = 4e-06
Identities = 46/286 (16%), Positives = 80/286 (27%), Gaps = 37/286 (12%)
Query: 25 VTGATGFIGRRLVQRLQADNHQVRV---LTRSRSKAELIFPGKKTRF-FPGVMIAEEPQW 80
+TG GF+G L + + V L+R + L + F F I +
Sbjct: 5 ITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDV 64
Query: 81 RDCIQGS--TAVVNLAGTPIGTRWSSEIKKEIK------------ESRIRVTSKVVDLIN 126
I + +LAG T + + + ++
Sbjct: 65 TRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSST 124
Query: 127 ESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG-------NDYLAEVCREWEGTALKV 179
G + T Y + +DES+ + A+ +
Sbjct: 125 NKVYGDLEQYKYNETETRYTCVDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGL 184
Query: 180 NKDVRLALIRIGIVLGKDGGALAKMIPLFMMF-----AGGPL---GSGQQWFSWIHLDDI 231
N V G P G+G+Q +H +D+
Sbjct: 185 NTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDM 244
Query: 232 VNLIYEALSNPS----YRGVINGTAPNPVRLAEMCDHLGNVLGRPS 273
++L + AL+N S I GT N + L E+ L +
Sbjct: 245 ISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 290
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 45.6 bits (106), Expect = 4e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 61
V VTG TGF G L LQ V+ + + +F
Sbjct: 10 RVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLF 49
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 45.0 bits (104), Expect = 7e-06
Identities = 8/30 (26%), Positives = 13/30 (43%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL 50
V V G G+ G L N++V ++
Sbjct: 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIV 31
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 44.3 bits (103), Expect = 9e-06
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55
+TG TG G L + L ++V L R S
Sbjct: 3 IALITGITGQDGSYLTEFLLGKGYEVHGLIRRSS 36
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 43.5 bits (101), Expect = 2e-05
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVL 50
V VTG G+IG V L + + V
Sbjct: 3 IVLVTGGAGYIGSHTVVELIENGYDCVVA 31
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} Length = 383 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Score = 42.9 bits (99), Expect = 3e-05
Identities = 19/68 (27%), Positives = 28/68 (41%), Gaps = 4/68 (5%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRV---LTRSRSKAELIFPGKKTRFFPGVMI 74
S M V V G G+IG V+ L D NH V + L + K++ + +
Sbjct: 1 SHMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSD 60
Query: 75 AEEPQWRD 82
+P W D
Sbjct: 61 GPKPPWAD 68
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} Length = 144 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.3 bits (88), Expect = 3e-04
Identities = 13/67 (19%), Positives = 26/67 (38%), Gaps = 3/67 (4%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE 77
+ V+V GATG +G LV L + ++ +L + S + + + + V +
Sbjct: 3 LNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFAESSLRVGDVDSFDF 62
Query: 78 PQWRDCI 84
Sbjct: 63 SSVGLAF 69
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Score = 39.6 bits (90), Expect = 3e-04
Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
Query: 25 VTGATGFIGRRLVQRLQADN-HQVRVL 50
VTG GFIG +V+ L + V+
Sbjct: 4 VTGGAGFIGSNIVKALNDKGITDILVV 30
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Score = 38.5 bits (88), Expect = 3e-04
Identities = 20/112 (17%), Positives = 40/112 (35%), Gaps = 9/112 (8%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP 78
+ +V + G+ GF+ R + L +V V R+ A+ + G + + + ++
Sbjct: 1 ATKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDA 59
Query: 79 QWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPE 130
+ V++L + +S IR VV SP
Sbjct: 60 ALDAEVAKHDLVISL--------IPYTFHATVIKSAIRQKKHVVTTSYVSPA 103
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} Length = 147 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Score = 37.3 bits (86), Expect = 5e-04
Identities = 11/50 (22%), Positives = 19/50 (38%), Gaps = 4/50 (8%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNH----QVRVLTRSRSKAELIFPGKKT 66
M V + G G +G L+QR+ + + + S+ GK
Sbjct: 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAPNFGKDA 50
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} Length = 245 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.1 bits (88), Expect = 8e-04
Identities = 15/78 (19%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Query: 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI--FPGKKTRFFPGVMIAEEPQ 79
+ +T A IG+ + +V + SK + + +PG +TR + Q
Sbjct: 8 VIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQ 67
Query: 80 WRDCIQGSTAVVNLAGTP 97
+ + ++ + N+AG
Sbjct: 68 FANEVERLDVLFNVAGFV 85
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 37.3 bits (85), Expect = 0.001
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58
M V++ G TG +G+ L RL H++ V +R KAE
Sbjct: 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAE 38
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Length = 250 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Score = 36.4 bits (83), Expect = 0.003
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL 59
S +V VTGA IG LVQ+L D + ++ +R +
Sbjct: 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKA 42
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 325 | |||
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 100.0 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 100.0 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 100.0 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 100.0 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 100.0 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 100.0 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 100.0 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 100.0 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 100.0 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 100.0 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 100.0 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 100.0 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 100.0 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 100.0 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 100.0 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 100.0 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 100.0 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.98 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.98 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.96 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.96 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.96 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.95 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.94 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.92 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.89 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.79 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.78 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.77 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.77 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.76 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.75 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.75 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.75 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.74 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.74 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.74 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.74 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.73 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.73 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.73 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.73 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.73 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.72 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.71 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.7 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.7 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.7 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.7 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.69 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.69 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.69 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.69 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.68 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.68 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.68 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.68 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.67 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.67 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.67 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.67 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.67 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.66 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.66 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.65 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.64 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.64 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.64 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.63 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.63 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.62 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.62 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.62 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.61 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.61 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.59 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.57 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.56 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.56 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.52 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.51 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.51 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.5 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.47 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.44 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.42 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.41 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.4 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.28 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.27 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.24 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.2 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.08 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.74 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.56 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 98.55 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.52 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.41 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.39 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 98.33 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 98.33 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 98.33 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 98.32 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 98.31 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.29 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 98.27 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 98.24 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 98.24 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 98.16 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.15 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 98.14 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 98.11 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 98.09 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 98.08 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 98.07 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.06 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.05 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.03 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 98.02 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 98.0 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 97.96 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.95 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 97.92 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 97.91 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.91 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 97.9 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 97.88 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 97.83 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 97.83 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.82 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.82 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.8 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.78 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.73 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 97.71 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.71 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 97.67 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.67 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.65 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.6 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.59 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.51 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 97.51 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.45 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 97.43 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.43 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 97.41 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.36 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 97.36 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 97.27 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.25 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.25 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.25 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 97.23 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.23 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.22 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.16 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 97.09 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 97.09 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.08 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 97.07 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 97.03 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 96.94 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.86 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 96.84 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 96.82 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 96.81 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.81 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 96.79 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.75 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.72 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.7 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.66 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 96.66 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 96.65 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.63 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 96.61 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 96.61 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 96.6 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 96.59 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 96.55 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.53 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.53 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 96.49 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 96.45 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.44 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 96.43 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 96.42 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 96.41 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 96.38 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 96.37 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 96.36 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 96.35 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 96.33 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 96.32 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 96.31 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 96.31 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 96.3 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 96.29 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 96.25 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.24 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 96.24 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 96.22 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.14 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 96.1 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.1 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 96.08 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.08 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 96.06 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 96.0 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.93 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.86 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 95.8 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 95.68 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.66 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 95.66 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 95.64 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 95.63 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 95.62 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.61 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.58 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.49 | |
| d2gv8a2 | 107 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 95.49 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 95.48 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.46 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 95.44 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 95.39 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 95.36 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.34 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 95.33 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.28 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 95.26 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 95.21 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.19 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 95.18 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 95.13 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.08 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 95.0 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 94.99 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.91 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 94.86 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 94.78 | |
| d1vkza2 | 90 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 94.76 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 94.64 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.64 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 94.63 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 94.63 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 94.56 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 94.55 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 94.53 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 94.33 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.3 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 94.25 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 93.84 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 93.64 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 93.59 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 93.58 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 93.52 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 93.37 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 93.34 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 93.31 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 93.29 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 93.19 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 93.1 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.04 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 93.0 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 92.98 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 92.95 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 92.91 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 92.83 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 92.79 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 92.76 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 92.75 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 92.67 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 92.64 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 92.54 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 92.37 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 92.34 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 92.22 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 91.94 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 91.92 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 91.82 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 91.8 | |
| d2bw0a2 | 203 | 10-formyltetrahydrofolate dehydrogenase domain 1 { | 91.79 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 91.78 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 91.75 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 91.04 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 90.8 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 90.68 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 90.61 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 90.54 | |
| d1gtma1 | 239 | Glutamate dehydrogenase {Archaeon Pyrococcus furio | 90.49 | |
| d1w4xa1 | 298 | Phenylacetone monooxygenase {Thermobifida fusca [T | 90.36 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 89.35 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 89.23 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 89.07 | |
| d1np3a2 | 182 | Class I ketol-acid reductoisomerase (KARI) {Pseudo | 89.02 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 88.47 | |
| d1lc0a1 | 172 | Biliverdin reductase {Rat (Rattus norvegicus) [Tax | 88.4 | |
| d1cjca2 | 230 | Adrenodoxin reductase of mitochondrial p450 system | 87.18 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.15 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 87.05 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 86.92 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 86.81 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 86.79 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 86.65 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 86.59 | |
| d2nu7a1 | 119 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 86.46 | |
| d1ofua1 | 198 | Cell-division protein FtsZ {Pseudomonas aeruginosa | 86.18 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 86.03 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 85.88 | |
| d1pn0a1 | 360 | Phenol hydroxylase {Soil-living yeast (Trichosporo | 84.63 | |
| d2nvwa1 | 237 | Galactose/lactose metabolism regulatory protein GA | 84.05 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 83.89 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 83.52 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 83.32 | |
| d3coxa1 | 370 | Cholesterol oxidase of GMC family {Brevibacterium | 83.17 | |
| d1rp0a1 | 278 | Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara | 82.61 | |
| d2f5va1 | 379 | Pyranose 2-oxidase {White-rot fungus (Peniophora s | 82.34 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 82.06 | |
| d1y0pa2 | 308 | Flavocytochrome c3 (respiratory fumarate reductase | 81.74 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.66 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 81.46 | |
| d1vdca1 | 192 | Thioredoxin reductase {Mouse-ear cress (Arabidopsi | 81.14 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 80.95 | |
| d2ax3a2 | 211 | Hypothetical protein TM0922, N-terminal domain {Th | 80.44 | |
| d1lqta2 | 239 | Ferredoxin:NADP reductase FprA {Mycobacterium tube | 80.08 |
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.6e-44 Score=304.89 Aligned_cols=287 Identities=18% Similarity=0.192 Sum_probs=222.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
++||||||||||||++|+++|+++|++|++++|........... .....++|+.+.+.+..++.++|+|||+|+....
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~d~VihlAa~~~~ 78 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEH--WIGHENFELINHDVVEPLYIEVDQIYHLASPASP 78 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGG--GTTCTTEEEEECCTTSCCCCCCSEEEECCSCCSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHHH--hcCCCceEEEehHHHHHHHcCCCEEEECcccCCc
Confidence 47999999999999999999999999999998754332221111 0115568998988888888899999999996532
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC-----C--CCCch-HHHHHHH
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS-----P--SGNDY-LAEVCRE 171 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~-----~--~~~~y-~~k~~~~ 171 (325)
.....++...+++|+.++.+|+++|++ .++ ++||+||+++ ||.....+.+|+. | |...| .+|...|
T Consensus 79 -~~~~~~~~~~~~~Nv~g~~~ll~~~~~--~~~-k~I~~SS~~v--y~~~~~~~~~e~~~~~~~~~~p~~~Y~~sK~~~E 152 (312)
T d2b69a1 79 -PNYMYNPIKTLKTNTIGTLNMLGLAKR--VGA-RLLLASTSEV--YGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAE 152 (312)
T ss_dssp -HHHTTCHHHHHHHHHHHHHHHHHHHHH--HTC-EEEEEEEGGG--GBSCSSSSBCTTCCCBCCSSSTTHHHHHHHHHHH
T ss_pred -hhHHhCHHHHHHHHHHHHHHHHHHHHH--cCC-cEEEEEChhe--ecCCCCCCCCccccCCCCCCCCccHHHHHHHHHH
Confidence 112345678889999999999999998 554 7999999999 9987777766643 3 23357 7899999
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCCc-ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCCC
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGGA-LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYR 245 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~~ 245 (325)
.+...+.+..+++++++||+.||||+... ...+++.+ +...++++ +++.+.++++|++|+++++..+++.. ..
T Consensus 153 ~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~-~~ 231 (312)
T d2b69a1 153 TMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN-VS 231 (312)
T ss_dssp HHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS-CC
T ss_pred HHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc-cC
Confidence 88888888889999999999999997533 23344444 55667764 78899999999999999999999776 57
Q ss_pred ceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHHHHHh
Q 020476 246 GVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 246 ~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l~~~~ 324 (325)
++||++++.++++.++++.+++.+|.+..+...... .+ ......++++|++ .|||+|++ +++++|++++
T Consensus 232 ~~~n~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~----~~-----~~~~~~~d~~k~~~~lgw~p~~-~l~~~I~~~i 301 (312)
T d2b69a1 232 SPVNLGNPEEHTILEFAQLIKNLVGSGSEIQFLSEA----QD-----DPQKRKPDIKKAKLMLGWEPVV-PLEEGLNKAI 301 (312)
T ss_dssp SCEEESCCCEEEHHHHHHHHHHHHTCCCCEEEECCC----TT-----CCCCCCBCCHHHHHHHCCCCCS-CHHHHHHHHH
T ss_pred CceEecCCcccchhhHHHHHHHHhCCCCceEECCCC----CC-----CCCeeeECHHHHHHHHCCCCCC-CHHHHHHHHH
Confidence 899999999999999999999999987443221110 11 1223566788885 58999999 5999999986
Q ss_pred C
Q 020476 325 S 325 (325)
Q Consensus 325 ~ 325 (325)
+
T Consensus 302 ~ 302 (312)
T d2b69a1 302 H 302 (312)
T ss_dssp H
T ss_pred H
Confidence 3
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=4.6e-43 Score=306.22 Aligned_cols=300 Identities=16% Similarity=0.117 Sum_probs=219.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-----ccCC----CCCccccCceeecCCchhHhhhC--CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFP----GKKTRFFPGVMIAEEPQWRDCIQ--GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~----~~~~~~~~~~d~~d~~~~~~~~~--~~d~ 89 (325)
|++||||||||||++|+++|++.|++|++++|..+... .... ......+..+|+.|.+.+.++++ ++|+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~ 81 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE 81 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence 57899999999999999999999999999999653211 1100 00111245689999999999997 5699
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCC--Cch-H
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG--NDY-L 165 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~~y-~ 165 (325)
|||+|+..+ ......++..++++|+.+|.+|+++|++.+ .+..||||+||+.+ ||.....+++|+++.. +.| .
T Consensus 82 v~h~aa~~~-~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~v--YG~~~~~~~~E~~~~~P~~~Y~~ 158 (357)
T d1db3a_ 82 VYNLGAMSH-VAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSEL--YGLVQEIPQKETTPFYPRSPYAV 158 (357)
T ss_dssp EEECCCCCT-TTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--GTTCCSSSBCTTSCCCCCSHHHH
T ss_pred EEEeecccc-cchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhh--hCCCCCCCcCCCCCCCCCChHHH
Confidence 999999753 334456678899999999999999999831 23346999999998 9988888999998754 467 8
Q ss_pred HHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH-HHHcCCC----CCCCcceeeeccHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGGP----LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~-~~~~~~~----~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+|...|.....+.+..+++++++||+++|||..+.. ..+...+ ....+.+ .+++.+.++++|++|+|+++..
T Consensus 159 sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~ 238 (357)
T d1db3a_ 159 AKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWM 238 (357)
T ss_dssp HHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHH
Confidence 899999888888888899999999999999964321 2222333 3333433 2788999999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHH------------HhCc---------cceeecc
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKA------------VLGE---------GAFVVLE 295 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~------------~~~~---------~~~~~~~ 295 (325)
+++++ ..++||+++++++|+.|+++.+.+.+|....+ ..+...... ..+. ..+....
T Consensus 239 ~~~~~-~~~~yni~sg~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ 317 (357)
T d1db3a_ 239 MLQQE-QPEDFVIATGVQYSVRQFVEMAAAQLGIKLRFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRPAEVE 317 (357)
T ss_dssp TTSSS-SCCCEEECCCCCEEHHHHHHHHHHTTTEEEEEESCGGGCEEEEEEECSSSCTTCCTTCEEEEECGGGCCCCC-C
T ss_pred HHhCC-CCCeEEECCCCceehHHHHHHHHHHhCCccccccccccccchhhhhhcccccccccCceeEeeccccCCCcccc
Confidence 99875 46899999999999999999999999854221 111000000 0000 0011123
Q ss_pred CcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 296 GQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 296 ~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
...+|++|+++ |||+|++ +++|+|+++++
T Consensus 318 ~~~~d~skakk~LGw~P~~-sl~egI~~~I~ 347 (357)
T d1db3a_ 318 TLLGDPTKAHEKLGWKPEI-TLREMVSEMVA 347 (357)
T ss_dssp CCCBCCHHHHHHHCCCCCS-CHHHHHHHHHH
T ss_pred ccccCHHHHHHHHCCCcCC-CHHHHHHHHHH
Confidence 34568889965 8999999 59999999863
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=100.00 E-value=2.1e-43 Score=304.33 Aligned_cols=289 Identities=21% Similarity=0.239 Sum_probs=221.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeE------EEEecCCCcccc--c--CCCCCccccCceeecCCchhHhhhCCCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQV------RVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V------~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
|||||||||||||++|+++|+++|++| +.+++....... . ........+...|..+.........++|.|
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~d~v 80 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELRGVDAI 80 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTTTCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHhhhhhcCCCeEEEEeccccchhhhccccccceE
Confidence 799999999999999999999999854 444432211111 1 111111113346666777777778899999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHH
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAE 167 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k 167 (325)
+|+|+... .........+.+++|+.++.+++++|++ .+++++||+||..+ ||.....+++|+++..+ .| .+|
T Consensus 81 i~~a~~~~-~~~~~~~~~~~~~~N~~gt~~ll~~~~~--~~~~~~I~~Ss~~~--yg~~~~~~~~E~~~~~p~~~Y~~sK 155 (322)
T d1r6da_ 81 VHFAAESH-VDRSIAGASVFTETNVQGTQTLLQCAVD--AGVGRVVHVSTNQV--YGSIDSGSWTESSPLEPNSPYAASK 155 (322)
T ss_dssp EECCSCCC-HHHHHHCCHHHHHHHTHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCCCSSSCBCTTSCCCCCSHHHHHH
T ss_pred Eeeccccc-ccccccchHHHhhhhHHHHHHHHHHHHH--cCCceEEEeeccee--ecCCCCCCCCCCCCCCCCCHHHHHH
Confidence 99998642 2333445677888999999999999999 78899999999999 99988889999988654 67 788
Q ss_pred HHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 168 VCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
...|.....+.++.+++++++||+.+|||++... .+++.+ +...++++ +++.+.++|+|++|+|+++..+++++
T Consensus 156 ~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~ 234 (322)
T d1r6da_ 156 AGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPE-KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG 234 (322)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT-SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcC-cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCC
Confidence 8899888888888899999999999999976432 344443 45666764 78899999999999999999999998
Q ss_pred CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcccccHHHHH
Q 020476 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFKYRYVKDAL 320 (325)
Q Consensus 243 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~~~~~~~~l 320 (325)
..+++||+++++++|+.|+++.+.+.+|.+.. +.... ..+.......++++|++ .|||+|++ +++|+|
T Consensus 235 ~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~d~~k~~~~lg~~p~~-~~eegI 304 (322)
T d1r6da_ 235 RAGEIYHIGGGLELTNRELTGILLDSLGADWSSVRKVA---------DRKGHDLRYSLDGGKIERELGYRPQV-SFADGL 304 (322)
T ss_dssp CTTCEEEECCCCEEEHHHHHHHHHHHHTCCGGGEEEEC---------CCTTCCCBCCBCCHHHHHHHCCCCCS-CHHHHH
T ss_pred CCCCeeEEeecccchhHHHHHHHHHHhCCCccceeecC---------CCCCCCceeeeCHHHHHHHHCCCCCC-CHHHHH
Confidence 87789999999999999999999999997632 11110 00011122456788886 59999999 599999
Q ss_pred HHHhC
Q 020476 321 KAIMS 325 (325)
Q Consensus 321 ~~~~~ 325 (325)
+++++
T Consensus 305 ~~~i~ 309 (322)
T d1r6da_ 305 ARTVR 309 (322)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99874
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=1.7e-41 Score=294.79 Aligned_cols=301 Identities=17% Similarity=0.145 Sum_probs=228.2
Q ss_pred HHhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-------cCCCC--CccccCceeecCCchhHhhh
Q 020476 14 RLLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-------IFPGK--KTRFFPGVMIAEEPQWRDCI 84 (325)
Q Consensus 14 ~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-------~~~~~--~~~~~~~~d~~d~~~~~~~~ 84 (325)
...+.++|+|||||||||||++|+++|++.|++|++++|....... ..... ....+...|..|...+....
T Consensus 10 ~~~~~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~ 89 (341)
T d1sb8a_ 10 KELPAQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNAC 89 (341)
T ss_dssp HHHHHSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHH
T ss_pred HhCCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhhcccCCeeEEeecccccccccccc
Confidence 3455667899999999999999999999999999999974432111 00000 00113346777777877778
Q ss_pred CCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC--C
Q 020476 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG--N 162 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~ 162 (325)
.++++|+|+++... ......++...+++|+.++.+++++|++ .+++++||+||..+ ||.....+++|+++.. +
T Consensus 90 ~~~~~v~~~~a~~~-~~~~~~~~~~~~~~Nv~gt~~ll~~~~~--~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~p~~ 164 (341)
T d1sb8a_ 90 AGVDYVLHQAALGS-VPRSINDPITSNATNIDGFLNMLIAARD--AKVQSFTYAASSST--YGDHPGLPKVEDTIGKPLS 164 (341)
T ss_dssp TTCSEEEECCSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--TTCSEEEEEEEGGG--GTTCCCSSBCTTCCCCCCS
T ss_pred cccccccccccccc-ccccccCccchhheeehhHHHHHHHHHh--cCCceEEEccccee--eCCCCCCCccCCCCCCCCC
Confidence 89999999998542 2224556778899999999999999999 78899999999999 9998888999988865 4
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCC---cccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG---ALAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~---~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...|.....+.+..+++++++||+.+||++.. ....+++.+ ....+.++ +++.+.++++|++|++.
T Consensus 165 ~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~ 244 (341)
T d1sb8a_ 165 PYAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQ 244 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccch
Confidence 67 78888898888888888999999999999999643 223444443 56667765 78899999999999999
Q ss_pred HHHHHHcCCC--CCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHHH-cCC
Q 020476 234 LIYEALSNPS--YRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGF 309 (325)
Q Consensus 234 a~~~~~~~~~--~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~ 309 (325)
++..++..+. .+++||++++..+|+.|+++.+.+.++.+.. +...........+ ......++++|+++ |||
T Consensus 245 a~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~k~~~~LGw 319 (341)
T d1sb8a_ 245 ANLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYHREPVYRDFREG-----DVRHSLADISKAAKLLGY 319 (341)
T ss_dssp HHHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCCCCCEEECCCTT-----CCSBCCBCCHHHHHHTCC
T ss_pred hhhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccccccccccccCCCCC-----CcCeeeeCHHHHHHHHCC
Confidence 9999997754 4569999999999999999999999986532 1111000000011 12234567788865 999
Q ss_pred CcccccHHHHHHHHhC
Q 020476 310 PFKYRYVKDALKAIMS 325 (325)
Q Consensus 310 ~p~~~~~~~~l~~~~~ 325 (325)
+|++ +++++|+++++
T Consensus 320 ~p~~-sl~~gi~~ti~ 334 (341)
T d1sb8a_ 320 APKY-DVSAGVALAMP 334 (341)
T ss_dssp CCCC-CHHHHHHHHHH
T ss_pred CcCC-CHHHHHHHHHH
Confidence 9999 59999999874
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.3e-41 Score=296.38 Aligned_cols=289 Identities=17% Similarity=0.174 Sum_probs=217.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-cCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
++.|||||||||||||++|+++|+++||+|++++|....... ..... .+..+|+.+.+.+.++++++|+|||+|+.
T Consensus 13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~---~~~~~D~~~~~~~~~~~~~~d~Vih~a~~ 89 (363)
T d2c5aa1 13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCD---EFHLVDLRVMENCLKVTEGVDHVFNLAAD 89 (363)
T ss_dssp TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCS---EEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhcccC---cEEEeechhHHHHHHHhhcCCeEeecccc
Confidence 357899999999999999999999999999999886544221 11111 13446777788888888999999999987
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceec-------CCCC--CCCch-HH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD-------ESSP--SGNDY-LA 166 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~-------e~~~--~~~~y-~~ 166 (325)
.................|+.++.++++++++ .+++++|++||..+ |+.....+.+ |..+ +...| .+
T Consensus 90 ~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~--~~vk~~i~~SS~~~--~~~~~~~~~~~~~~~~~e~~~~~p~~~Yg~s 165 (363)
T d2c5aa1 90 MGGMGFIQSNHSVIMYNNTMISFNMIEAARI--NGIKRFFYASSACI--YPEFKQLETTNVSLKESDAWPAEPQDAFGLE 165 (363)
T ss_dssp CCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH--TTCSEEEEEEEGGG--SCGGGSSSSSSCEECGGGGSSBCCSSHHHHH
T ss_pred cccccccccccccccccccchhhHHHHhHHh--hCcccccccccccc--ccccccccccccccccccCCcCCCCCHHHHH
Confidence 5443333456778889999999999999999 79999999999998 8865544333 2233 34567 78
Q ss_pred HHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchH-HHH--HHHcCCC---CCCCcceeeeccHHHHHHHHHH
Q 020476 167 EVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMI-PLF--MMFAGGP---LGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 167 k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~-~~~--~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
|...|.....+.+..+++++++||+.+||+++... .... ... ......+ .+++.+.++|+|++|+++++..
T Consensus 166 K~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~~~~~~~ 245 (363)
T d2c5aa1 166 KLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLR 245 (363)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCEEHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEEEeehhHHHHHHHH
Confidence 88888888888888899999999999999865321 1111 111 2222222 2788899999999999999999
Q ss_pred HHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccH
Q 020476 238 ALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYV 316 (325)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~ 316 (325)
+++.+ .+++||++++.++|+.|+++.+.+.+|++..+..... .. ......+|++|+++ |||+|++ ++
T Consensus 246 ~~~~~-~~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i~~~~~-----~~-----~~~~~~~d~ska~~~LGw~p~~-sl 313 (363)
T d2c5aa1 246 LTKSD-FREPVNIGSDEMVSMNEMAEMVLSFEEKKLPIHHIPG-----PE-----GVRGRNSDNNLIKEKLGWAPNM-RL 313 (363)
T ss_dssp HHHSS-CCSCEEECCCCCEEHHHHHHHHHHTTTCCCCEEEECC-----CC-----CCSBCEECCHHHHHHHSCCCCC-CH
T ss_pred HHhCC-CCCeEEEecCCcccHHHHHHHHHHHhCCCCceEeCCC-----CC-----CccccccCHHHHHHHhCCCCCC-CH
Confidence 99875 5789999999999999999999999998744321110 01 12234467788865 8999999 59
Q ss_pred HHHHHHHhC
Q 020476 317 KDALKAIMS 325 (325)
Q Consensus 317 ~~~l~~~~~ 325 (325)
+|+|+++++
T Consensus 314 eegi~~ti~ 322 (363)
T d2c5aa1 314 KEGLRITYF 322 (363)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999863
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.4e-41 Score=295.54 Aligned_cols=298 Identities=15% Similarity=0.144 Sum_probs=216.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEE-EecCCCcc--cccCCCC--CccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRV-LTRSRSKA--ELIFPGK--KTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~-~~r~~~~~--~~~~~~~--~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
|||||||||||||++|+++|++.|++|++ +++..... ....... ....+..+|+.|.+.+.++++ ++|+||||
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~Vihl 80 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSAEITRIFEQYQPDAVMHL 80 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHHHHHHHHHhCCCCEEEEC
Confidence 69999999999999999999999997544 44432221 1111111 111234578889999988886 68999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-------CCCCCEEEEeeeeeeeecCCCCceec----------C
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATALGYYGTSETEVFD----------E 156 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-------~~~~~~v~~Ss~~v~~~g~~~~~~~~----------e 156 (325)
|+... ......++...+++|+.++.+++++|++.. .+++++||+||..+ ||.....+.. |
T Consensus 81 Aa~~~-~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~~~~~~~~~~~e 157 (361)
T d1kewa_ 81 AAESH-VDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEV--YGDLPHPDEVENSVTLPLFTE 157 (361)
T ss_dssp CSCCC-HHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGG--GCCCCCGGGSCTTSCCCCBCT
T ss_pred ccccc-hhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEecccee--eCCCccCCccccccCCCCccc
Confidence 99642 222344567789999999999999998621 13458999999999 9866543322 3
Q ss_pred CCCC--CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCC---CCCcceeeeccH
Q 020476 157 SSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPL---GSGQQWFSWIHL 228 (325)
Q Consensus 157 ~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v 228 (325)
.++. .+.| .+|...|.....+....+++++++||+.||||++... .+++.+ +...++++ +++.+.|+|+|+
T Consensus 158 ~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~-~~i~~~i~~~~~g~~~~v~g~g~~~r~~i~v 236 (361)
T d1kewa_ 158 TTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPE-KLIPLVILNALEGKPLPIYGKGDQIRDWLYV 236 (361)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-SHHHHHHHHHHHTCCEEEETTSCCEEEEEEH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcC-cHHHHHHHHHHcCCCcEEeCCCCeEEeCEEH
Confidence 3332 3458 8899999999888888899999999999999976442 344443 55677775 789999999999
Q ss_pred HHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCC-ccHHHHHHHhCccceeeccCcccChhHHH-H
Q 020476 229 DDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLP-VPEFALKAVLGEGAFVVLEGQRVVPARAK-E 306 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~ 306 (325)
+|+|+++..+++++..+++||++++++.+..|+++.+.+.++...... ....... .....+.......++++|++ +
T Consensus 237 ~D~a~ai~~~~~~~~~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~~k~~~~ 314 (361)
T d1kewa_ 237 EDHARALHMVVTEGKAGETYNIGGHNEKKNLDVVFTICDLLDEIVPKATSYREQIT--YVADRPGHDRRYAIDAGKISRE 314 (361)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEECCCCEEEHHHHHHHHHHHHHHHSCCSSCGGGGEE--EECCCTTCCCBCCBCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCeEEECCCCCcchHHHHhHhhhhcccccccccCccccee--ecCCCCCCCceeeeCHHHHHHH
Confidence 999999999999887778999999999999999999999886432111 1100000 00011112234567888886 5
Q ss_pred cCCCcccccHHHHHHHHhC
Q 020476 307 LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 307 lg~~p~~~~~~~~l~~~~~ 325 (325)
|||+|++ +++|+|+++++
T Consensus 315 lgw~P~~-~l~e~i~~ti~ 332 (361)
T d1kewa_ 315 LGWKPLE-TFESGIRKTVE 332 (361)
T ss_dssp HCCCCSC-CHHHHHHHHHH
T ss_pred HCCCCCC-CHHHHHHHHHH
Confidence 8999999 59999999874
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=100.00 E-value=2.7e-40 Score=287.62 Aligned_cols=292 Identities=15% Similarity=0.124 Sum_probs=216.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc--cc-cc-CC-CCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AE-LI-FP-GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~-~~-~~-~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
+||||||||||||||++|+++|++.|++|.++.++..+ .. .. .. ......+..+|+.|.+.+.++++++|.|+|+
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~~~~~~~~~~~~v~~~ 80 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKLAAKADAIVHY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHHHHHHHHhhhhhhhhh
Confidence 47899999999999999999999999877666654211 11 00 00 0011124457888999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC------------CceecCCCCC-
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE------------TEVFDESSPS- 160 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~------------~~~~~e~~~~- 160 (325)
|+.... .....++.+.+++|+.++.+++++++. .+ .++|++||+.+ ||... ....+|+++.
T Consensus 81 a~~~~~-~~~~~~~~~~~~~N~~g~~nll~~~~~--~~-~k~i~~ss~~v--yg~~~~~~~~~~~~~~~~~~~~e~~~~~ 154 (346)
T d1oc2a_ 81 AAESHN-DNSLNDPSPFIHTNFIGTYTLLEAARK--YD-IRFHHVSTDEV--YGDLPLREDLPGHGEGPGEKFTAETNYN 154 (346)
T ss_dssp CSCCCH-HHHHHCCHHHHHHHTHHHHHHHHHHHH--HT-CEEEEEEEGGG--GCCBCCGGGSTTTTCSTTSSBCTTSCCC
T ss_pred hhcccc-cchhhCcccceeeehHhHHhhhhhhcc--cc-ccccccccceE--ecccCccccccccccCcccccccCCCCC
Confidence 986522 223345678889999999999999998 44 58999999988 87421 1234454443
Q ss_pred -CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCC---CCCcceeeeccHHHHHHH
Q 020476 161 -GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPL---GSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 161 -~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~v~v~D~a~a 234 (325)
.+.| .+|...|.....+.+..+++++++||+.+|||.......+...+ ....+.++ +++.+.++++|++|+|++
T Consensus 155 p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~v~D~a~a 234 (346)
T d1oc2a_ 155 PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTG 234 (346)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccchhhHHHH
Confidence 3457 78888888888887778999999999999998754333333333 44455553 789999999999999999
Q ss_pred HHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHHHHHhCccceeeccCcccChhHHH-HcCCCcc
Q 020476 235 IYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGFPFK 312 (325)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~~p~ 312 (325)
++.++.++..++.||++++++.++.++++.+.+.++++.. +...... .+. .....++++|++ .|||+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~----~~~-----~~~~~~d~~k~~~~LGw~P~ 305 (346)
T d1oc2a_ 235 VWAILTKGRMGETYLIGADGEKNNKEVLELILEKMGQPKDAYDHVTDR----AGH-----DLRYAIDASKLRDELGWTPQ 305 (346)
T ss_dssp HHHHHHHCCTTCEEEECCSCEEEHHHHHHHHHHHTTCCTTCSEEECCC----TTC-----CCBCCBCCHHHHHHHCCCCS
T ss_pred HHHHHhhcccCccccccccccccchHHHHHHHHHhCCCCcceEECCCC----CCC-----CceeeeCHHHHHHHHCCCCc
Confidence 9999999888889999999999999999999999997632 2111100 111 112345778885 5999999
Q ss_pred cccHHHHHHHHhC
Q 020476 313 YRYVKDALKAIMS 325 (325)
Q Consensus 313 ~~~~~~~l~~~~~ 325 (325)
+++++++|+++++
T Consensus 306 ~t~l~e~i~~ti~ 318 (346)
T d1oc2a_ 306 FTDFSEGLEETIQ 318 (346)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 8679999999873
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=6.9e-40 Score=284.08 Aligned_cols=290 Identities=19% Similarity=0.260 Sum_probs=212.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
|||||||||||||++|++.|+++|++|++++|.......... ......+..+|+.|.+.+.++++ ++|+|||+
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHl 80 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHF 80 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEEC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEEC
Confidence 799999999999999999999999999999874433211000 00011255689999999999987 79999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC---CCch-HHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS---GNDY-LAEVC 169 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~---~~~y-~~k~~ 169 (325)
|+.. .......++..++++|+.++.+++++|++ .+++++|++||..+ |+.....+..|..+. ...| .+|..
T Consensus 81 Aa~~-~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~--~~v~~~i~~Ss~~v--y~~~~~~~~~e~~~~~~p~~~Y~~sK~~ 155 (338)
T d1udca_ 81 AGLK-AVGESVQKPLEYYDNNVNGTLRLISAMRA--ANVKNFIFSSSATV--YGDQPKIPYVESFPTGTPQSPYGKSKLM 155 (338)
T ss_dssp CSCC-CHHHHHHCHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCSCCSSSBCTTSCCCCCSSHHHHHHHH
T ss_pred CCcc-chhhHHhCHHHHHHhHHHHHHHHHHHHHH--hCCCEEEecCcceE--EccccccccccccccCCCcchHHHHHhh
Confidence 9964 22233446778999999999999999999 78999999999998 887766666555542 4456 77777
Q ss_pred HHHHHHH-HhhcCCceEEEEEeceEEcCCCCc---------ccchHHHH-HHHcC--CCC---------CCCcceeeecc
Q 020476 170 REWEGTA-LKVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMFAG--GPL---------GSGQQWFSWIH 227 (325)
Q Consensus 170 ~~~~~~~-~~~~~~~~~~ilRp~~i~g~~~~~---------~~~~~~~~-~~~~~--~~~---------~~~~~~~~~v~ 227 (325)
.|..... ..+..+++++++||+++||+.... ...+++.+ ....+ .++ .++.+.++|+|
T Consensus 156 ~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~ 235 (338)
T d1udca_ 156 VEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIH 235 (338)
T ss_dssp HHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEE
T ss_pred hhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEE
Confidence 7766654 444468999999999999985321 12344444 22211 121 45788999999
Q ss_pred HHHHHHHHHHHHcC---CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHH
Q 020476 228 LDDIVNLIYEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARA 304 (325)
Q Consensus 228 v~D~a~a~~~~~~~---~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 304 (325)
++|++.++..+... ....++||+++++++|+.|+++.+.+.+|.+..+..... ..+. .....++++|+
T Consensus 236 v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~~~~~~~----~~~~-----~~~~~~d~~k~ 306 (338)
T d1udca_ 236 VMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPR----REGD-----LPAYWADASKA 306 (338)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCCEEEECC----CTTC-----CSBCCBCCHHH
T ss_pred EeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCceEECCC----CCCC-----CCEeeECHHHH
Confidence 99999888776653 224459999999999999999999999997643222111 0111 22345678888
Q ss_pred HH-cCCCcccccHHHHHHHHhC
Q 020476 305 KE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 305 ~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
+. |||+|++ +++|+|+++++
T Consensus 307 ~~~lgwkp~~-~l~egi~~ti~ 327 (338)
T d1udca_ 307 DRELNWRVTR-TLDEMAQDTWH 327 (338)
T ss_dssp HHHHCCCCCC-CHHHHHHHHHH
T ss_pred HHHHCCCcCC-CHHHHHHHHHH
Confidence 74 9999999 59999999873
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=100.00 E-value=5e-39 Score=276.81 Aligned_cols=291 Identities=16% Similarity=0.130 Sum_probs=216.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc--c--CCCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--I--FPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~--~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
++|||||||||||++|++.|+++||+|++++|....... + ........+..+|+.|.+.+.+.+. ..++++|+|
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~a 80 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNLA 80 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHHHhcccCCcEEEEccccChHHhhhhhcccccccccccc
Confidence 589999999999999999999999999999997654221 1 0100011245678889998888775 578999998
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCC-CEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHH
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVR-PSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR 170 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~-~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~ 170 (325)
+... ......+...++..|+.++.+++++|++ .+.+ ++++.||..+ ||.....+.+|+++. ...| .+|...
T Consensus 81 ~~~~-~~~~~~~~~~~~~~n~~g~~~~l~~~~~--~~~~~~~i~~Ss~~~--~~~~~~~~~~E~~~~~p~~~Y~~sK~~~ 155 (321)
T d1rpna_ 81 AQSF-VGASWNQPVTTGVVDGLGVTHLLEAIRQ--FSPETRFYQASTSEM--FGLIQAERQDENTPFYPRSPYGVAKLYG 155 (321)
T ss_dssp SCCC-HHHHTTSHHHHHHHHTHHHHHHHHHHHH--HCTTSEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSHHHHHHHHH
T ss_pred cccc-ccccccchHHHHhhhhhchHHHHHHHHH--hCCCcccccccchhh--cCcccCCCCCCCCCccccChhHHHHHHH
Confidence 7542 2223345678889999999999999998 4544 5666677666 888877788888875 4467 788888
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH-HHHcCC-C---CCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGG-P---LGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~-~~~~~~-~---~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|.....+....+++++++||+++|||..+.. ..+...+ +...+. + ++++++.++|+|++|+|+++..+++++
T Consensus 156 E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~ 235 (321)
T d1rpna_ 156 HWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD 235 (321)
T ss_dssp HHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC
Confidence 8888888888899999999999999964221 1223333 333333 2 278999999999999999999999987
Q ss_pred CCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHH
Q 020476 243 SYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDA 319 (325)
Q Consensus 243 ~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~ 319 (325)
. .+.||+++++..|+.++++.+.+.+|.+.. ........ .+.......++++|+++ |||+|++ +++|+
T Consensus 236 ~-~~~~ni~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-------rp~~~~~~~~d~~k~~k~lG~~P~~-~l~e~ 306 (321)
T d1rpna_ 236 K-ADDYVVATGVTTTVRDMCQIAFEHVGLDYRDFLKIDPAFF-------RPAEVDVLLGNPAKAQRVLGWKPRT-SLDEL 306 (321)
T ss_dssp S-CCCEEECCSCEEEHHHHHHHHHHTTTCCGGGTEEECGGGC-------CSSCCCBCCBCTHHHHHHHCCCCCS-CHHHH
T ss_pred C-cCCceecccccceehhhhHHHHHHhCCCccceeecCCCCC-------CCCccCCccCCHHHHHHHHCCCcCC-CHHHH
Confidence 5 689999999999999999999999997622 11111110 01112234557788875 8999999 59999
Q ss_pred HHHHhC
Q 020476 320 LKAIMS 325 (325)
Q Consensus 320 l~~~~~ 325 (325)
|+++++
T Consensus 307 i~~tv~ 312 (321)
T d1rpna_ 307 IRMMVE 312 (321)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999873
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.1e-38 Score=273.83 Aligned_cols=276 Identities=13% Similarity=0.160 Sum_probs=213.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~ 97 (325)
++||||||||||||++|+++|+++|+.|+++++.. .+|+.+.+.+.++++ ++|+|+|+|+..
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~----------------~~~~~~~~~~~~~~~~~~~d~v~~~a~~~ 65 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD----------------ELNLLDSRAVHDFFASERIDQVYLAAAKV 65 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT----------------TCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCch----------------hccccCHHHHHHHHhhcCCCEEEEcchhc
Confidence 46999999999999999999999999988765432 368888888888875 699999999865
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC-------CCch-HHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS-------GNDY-LAEVC 169 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~-------~~~y-~~k~~ 169 (325)
...........++++.|+.++.+++++|++ .+++++||+||.++ ||.....+++|+.+. ...| .+|..
T Consensus 66 ~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~v~~~i~~SS~~v--yg~~~~~~~~E~~~~~~~~~~~~~~Y~~sK~~ 141 (315)
T d1e6ua_ 66 GGIVANNTYPADFIYQNMMIESNIIHAAHQ--NDVNKLLFLGSSCI--YPKLAKQPMAESELLQGTLEPTNEPYAIAKIA 141 (315)
T ss_dssp CCHHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEECCGGG--SCTTCCSSBCGGGTTSSCCCGGGHHHHHHHHH
T ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHH--cCCCEEEEECCceE--cCCCCCCCccCCccccCCCCCCCCHHHHHHHH
Confidence 433333455677788999999999999999 78999999999999 998777777775542 2247 88888
Q ss_pred HHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHH-------HHHHcCCCC---CCCcceeeeccHHHHHHHHH
Q 020476 170 REWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPL-------FMMFAGGPL---GSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~-------~~~~~~~~~---~~~~~~~~~v~v~D~a~a~~ 236 (325)
.|.....+.++.+++++++||++||||++... ..+... .....+.++ +++.+.++++|++|++.++.
T Consensus 142 ~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~v~d~~~~~~ 221 (315)
T d1e6ua_ 142 GIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMREFLHVDDMAAASI 221 (315)
T ss_dssp HHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEECEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEEEEEEeehhHHHHH
Confidence 88888888888899999999999999965321 111111 123334443 67888999999999999999
Q ss_pred HHHcCCC---------CCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHHc
Q 020476 237 EALSNPS---------YRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKEL 307 (325)
Q Consensus 237 ~~~~~~~---------~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~l 307 (325)
.++.... ..+.++++.+.+.+..++++.+.+.+|.+..+..... .+.......++++|+++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~i~~~~~---------~~~~~~~~~~d~sk~k~L 292 (315)
T d1e6ua_ 222 HVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGRVVFDAS---------KPDGTPRKLLDVTRLHQL 292 (315)
T ss_dssp HHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSEEEEETT---------SCCCCSBCCBCCHHHHHT
T ss_pred HhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcceEECCC---------CCCCCceeccCHHHHHHc
Confidence 9986542 3458999999999999999999999997743321110 011122345788889999
Q ss_pred CCCcccccHHHHHHHHhC
Q 020476 308 GFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 308 g~~p~~~~~~~~l~~~~~ 325 (325)
||+|++ +++|+|+++++
T Consensus 293 g~~p~~-~l~e~i~~ti~ 309 (315)
T d1e6ua_ 293 GWYHEI-SLEAGLASTYQ 309 (315)
T ss_dssp TCCCCC-CHHHHHHHHHH
T ss_pred CCCCCC-CHHHHHHHHHH
Confidence 999999 59999999863
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.4e-38 Score=274.95 Aligned_cols=296 Identities=18% Similarity=0.256 Sum_probs=212.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHh-hhCCCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRD-CIQGSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~-~~~~~d~vi~~a~~~~ 98 (325)
|||||||||||||++|+++|+++|+ +|+++++............. ..+..+|+.+.+.+.+ +.+++|+|||+|+...
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~-~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~~~ 79 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPH-FHFVEGDISIHSEWIEYHVKKCDVVLPLVAIAT 79 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTT-EEEEECCTTTCSHHHHHHHHHCSEEEECBCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCC-eEEEECccCChHHHHHHHHhCCCcccccccccc
Confidence 6999999999999999999999984 89999987655444433211 1245678877766655 6678999999999652
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC---------CCCch-HHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---------SGNDY-LAEV 168 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~---------~~~~y-~~k~ 168 (325)
. ......+...+..|+.++.++++++.+ .+ .+++|+||+.+ |+.......+|..+ +...| .+|.
T Consensus 80 ~-~~~~~~~~~~~~~nv~gt~~ll~~~~~--~~-~~~~~~ss~~~--~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~ 153 (342)
T d2blla1 80 P-IEYTRNPLRVFELDFEENLRIIRYCVK--YR-KRIIFPSTSEV--YGMCSDKYFDEDHSNLIVGPVNKPRWIYSVSKQ 153 (342)
T ss_dssp H-HHHHHSHHHHHHHHTHHHHHHHHHHHH--TT-CEEEEECCGGG--GBTCCCSSBCTTTCCCBCCCTTCGGGHHHHHHH
T ss_pred c-cccccCCcccccccccccccccccccc--cc-ccccccccccc--cccccccccccccccccccccCCCcchhhhccc
Confidence 2 223445667899999999999999998 45 46778999888 88666554444322 12346 7898
Q ss_pred HHHHHHHHHhhcCCceEEEEEeceEEcCCCCc-------ccchHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHH
Q 020476 169 CREWEGTALKVNKDVRLALIRIGIVLGKDGGA-------LAKMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~-------~~~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~ 236 (325)
..|.....+.+..+++++++||+.+||+.... .......+ +...++++ +++.+.++++|++|+|+++.
T Consensus 154 ~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~ 233 (342)
T d2blla1 154 LLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALY 233 (342)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHH
T ss_pred chhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceee
Confidence 89988888888889999999999999985321 11222222 55667764 78899999999999999999
Q ss_pred HHHcCCC---CCceEEeeCCC-CCCHHHHHHHHHHHhCCCCC-CCccHHH------HHHHhCccceeeccCcccChhHHH
Q 020476 237 EALSNPS---YRGVINGTAPN-PVRLAEMCDHLGNVLGRPSW-LPVPEFA------LKAVLGEGAFVVLEGQRVVPARAK 305 (325)
Q Consensus 237 ~~~~~~~---~~~~~~~~~~~-~~s~~e~~~~i~~~~g~~~~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~k~~ 305 (325)
.+++++. .+++||+++++ .+|+.|+++.+.+.+|.... ...|... .....+... ......+++++|++
T Consensus 234 ~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~k~~ 312 (342)
T d2blla1 234 RIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLRHHFPPFAGFRVVESSSYYGKGY-QDVEHRKPSIRNAH 312 (342)
T ss_dssp HHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTGGGSCCCCCEEEC-------------CCCCCBCCHHHH
T ss_pred eehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccccccCcccccceecccccccccc-ccccccccCHHHHH
Confidence 9998753 34599998765 58999999999999987532 1222110 000011100 01233456888886
Q ss_pred H-cCCCcccccHHHHHHHHhC
Q 020476 306 E-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 306 ~-lg~~p~~~~~~~~l~~~~~ 325 (325)
+ |||+|++ +++|+|+++++
T Consensus 313 ~~lgw~P~~-sleegl~~ti~ 332 (342)
T d2blla1 313 RCLDWEPKI-DMQETIDETLD 332 (342)
T ss_dssp HHHCCCCCC-CHHHHHHHHHH
T ss_pred HHHCCCcCC-CHHHHHHHHHH
Confidence 4 9999999 59999999873
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.9e-38 Score=274.92 Aligned_cols=300 Identities=15% Similarity=0.104 Sum_probs=218.4
Q ss_pred CeE-EEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-----cCCC-----CCccccCceeecCCchhHhhhC--CC
Q 020476 21 MTV-SVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GS 87 (325)
Q Consensus 21 ~~i-lI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~-----~~~~~~~~~d~~d~~~~~~~~~--~~ 87 (325)
+|| ||||||||||++|+++|+++||+|++++|..+.... +... .....+..+|+.|.+.+.+++. ++
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~ 80 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQAHIEGNMKLHYGDLTDSTCLVKIINEVKP 80 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------CEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhchhhhccCCcEEEEeecCCchhhHHHHhhccc
Confidence 588 999999999999999999999999999997643211 1110 0011244578889999998885 68
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY 164 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y 164 (325)
++|+|+++.. .......+....+++|+.++.++++++++++ .+.+++||+||..+ ||.....+++|+++..| .|
T Consensus 81 ~~v~~~~a~~-~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~v--yg~~~~~~~~E~~~~~P~~~Y 157 (347)
T d1t2aa_ 81 TEIYNLGAQS-HVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSEL--YGKVQEIPQKETTPFYPRSPY 157 (347)
T ss_dssp SEEEECCSCC-CHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGG--TCSCSSSSBCTTSCCCCCSHH
T ss_pred ceeeeeeecc-ccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchhe--ecCCCCCCCCCCCCCCCCCHH
Confidence 8999999854 2333345667778999999999999999842 12347999999998 99888888999988644 57
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH-HH-HcCCC---CCCCcceeeeccHHHHHHHH
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MM-FAGGP---LGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~-~~-~~~~~---~~~~~~~~~~v~v~D~a~a~ 235 (325)
.+|...|.....+.+..+++++++||+.+|||..... ..+...+ .. ....+ ++++.+.++++|++|++.++
T Consensus 158 g~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~ 237 (347)
T d1t2aa_ 158 GAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAM 237 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHH
Confidence 8888888888887777899999999999999864321 1122222 22 22333 27889999999999999999
Q ss_pred HHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCC-CccHHHHHHH--hCc---------cceeeccCcccChhH
Q 020476 236 YEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWL-PVPEFALKAV--LGE---------GAFVVLEGQRVVPAR 303 (325)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~k 303 (325)
..++++.. .+.|++..+...++.++.+.+...+++.... ..+....... ... ..+.......+|++|
T Consensus 238 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~~~~~d~sk 316 (347)
T d1t2aa_ 238 WLMLQNDE-PEDFVIATGEVHSVREFVEKSFLHIGKTIVWEGKNENEVGRCKETGKVHVTVDLKYYRPTEVDFLQGDCTK 316 (347)
T ss_dssp HHHHHSSS-CCCEEECCSCCEEHHHHHHHHHHHTTCCEEEESCGGGCEEEETTTCCEEEEECGGGSCSSCCCBCCBCCHH
T ss_pred HHHhhcCC-CccceeccccccccchhhhhhhhhhcceeeecccchhhhhhhhhcCCceeeecccCCCCCCcCEeeECHHH
Confidence 99999875 5788899999999999999999999975221 1111100000 000 001112234568889
Q ss_pred HHH-cCCCcccccHHHHHHHHhC
Q 020476 304 AKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 304 ~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
+++ |||+|++ +++|+|+++++
T Consensus 317 ak~~Lgw~P~~-sl~e~i~~~I~ 338 (347)
T d1t2aa_ 317 AKQKLNWKPRV-AFDELVREMVH 338 (347)
T ss_dssp HHHHHCCCCCS-CHHHHHHHHHH
T ss_pred HHHHHCCCcCC-CHHHHHHHHHH
Confidence 965 8999999 59999999873
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-37 Score=268.57 Aligned_cols=292 Identities=18% Similarity=0.170 Sum_probs=208.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----------CCccccCceeecCCchhHhhhC--
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----------KKTRFFPGVMIAEEPQWRDCIQ-- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----------~~~~~~~~~d~~d~~~~~~~~~-- 85 (325)
|.+||||||||||||++|+++|+++|++|++++|........... .....+..+|+.|.+.+.+++.
T Consensus 1 M~kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~ 80 (346)
T d1ek6a_ 1 MAEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY 80 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC
T ss_pred CCCeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHhcCCCcEEEEeecccccccccccccc
Confidence 446999999999999999999999999999998643322111100 0001245679999999988875
Q ss_pred CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC---CCC
Q 020476 86 GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP---SGN 162 (325)
Q Consensus 86 ~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~---~~~ 162 (325)
++++++|+|+... ......++.+.++.|+.++.++++++++ .++++++|+||+.+ |+........+..+ +..
T Consensus 81 ~~~~i~h~Aa~~~-~~~~~~~p~~~~~~Nv~gt~~l~~~~~~--~~v~~~i~~ss~~~--~~~~~~~~~~~~~~~~~~~~ 155 (346)
T d1ek6a_ 81 SFMAVIHFAGLKA-VGESVQKPLDYYRVNLTGTIQLLEIMKA--HGVKNLVFSSSATV--YGNPQYLPLDEAHPTGGCTN 155 (346)
T ss_dssp CEEEEEECCSCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--GCSCSSSSBCTTSCCCCCSS
T ss_pred ccccccccccccC-cHhhHhCHHHHHHhhhcccccccchhhh--cCccccccccccee--eeccccccccccccccccCC
Confidence 5778999999653 3334556778899999999999999999 78999999999998 77665443333222 344
Q ss_pred ch-HHHHHHHHHHHHHhh-cCCceEEEEEeceEEcCCCCc---------ccchHHHH-HHH--cCCC---------CCCC
Q 020476 163 DY-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGGA---------LAKMIPLF-MMF--AGGP---------LGSG 219 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~-~~~~~~~ilRp~~i~g~~~~~---------~~~~~~~~-~~~--~~~~---------~~~~ 219 (325)
.| .+|...|.....+.+ ..+++++++||+.+||+.... ...+++.+ ... .+.+ ..++
T Consensus 156 ~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g 235 (346)
T d1ek6a_ 156 PYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDG 235 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSS
T ss_pred hHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCC
Confidence 56 677777766555444 459999999999999985321 12334433 222 2222 2467
Q ss_pred cceeeeccHHHHHHHHHHHHcC---CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccC
Q 020476 220 QQWFSWIHLDDIVNLIYEALSN---PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEG 296 (325)
Q Consensus 220 ~~~~~~v~v~D~a~a~~~~~~~---~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (325)
.+.++|+|++|+|.++..++.. ....++||+++++.+|+.|+++.+.+.+|.+..+...+. ..++...
T Consensus 236 ~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~~~~~~~----~~~e~~~----- 306 (346)
T d1ek6a_ 236 TGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIPYKVVAR----REGDVAA----- 306 (346)
T ss_dssp SCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCCEEEECC----CTTCCSE-----
T ss_pred CeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCCeEECCC----CCCCCCE-----
Confidence 7889999999999998887543 224459999999999999999999999998643221111 1122222
Q ss_pred cccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 297 QRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 297 ~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
..++++|+++ |||+|++ +++|+|+++++
T Consensus 307 ~~~d~~k~~~~lgw~p~~-slee~I~~~i~ 335 (346)
T d1ek6a_ 307 CYANPSLAQEELGWTAAL-GLDRMCEDLWR 335 (346)
T ss_dssp ECBCCHHHHHTTCCCCCC-CHHHHHHHHHH
T ss_pred eeECHHHHHHHHCCCcCC-CHHHHHHHHHH
Confidence 3356777865 8999999 59999999874
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=1.8e-36 Score=263.50 Aligned_cols=287 Identities=20% Similarity=0.201 Sum_probs=209.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc--------cCCCCCccccCceeecCCchhHhhhC--CCCEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--------IFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAV 90 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~v 90 (325)
|.|||||||||||++|+++|+++|++|++++|....... ..... .+..+|+.|.+.+.++++ ++|+|
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v---~~~~~Dl~d~~~l~~~~~~~~~d~V 78 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHI---PFYEVDLCDRKGLEKVFKEYKIDSV 78 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCC---CEEECCTTCHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCC---eEEEeecCCHHHHHHHHhccCCCEE
Confidence 469999999999999999999999999999874432111 01111 245689999999998876 89999
Q ss_pred EECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCC----ceecCCCCCC--Cch
Q 020476 91 VNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSET----EVFDESSPSG--NDY 164 (325)
Q Consensus 91 i~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~----~~~~e~~~~~--~~y 164 (325)
||+|+... .......+..+..+|+.++.+++++|++ .+++++|++||..+ ||.... .+++|+.+.. ..|
T Consensus 79 ihlAa~~~-~~~~~~~~~~~~~~N~~~t~~ll~~~~~--~~i~~~i~~SS~~v--yg~~~~~~~~~~~~e~~~~~p~~~Y 153 (347)
T d1z45a2 79 IHFAGLKA-VGESTQIPLRYYHNNILGTVVLLELMQQ--YNVSKFVFSSSATV--YGDATRFPNMIPIPEECPLGPTNPY 153 (347)
T ss_dssp EECCSCCC-HHHHHHSHHHHHHHHHHHHHHHHHHHHH--HTCCEEEEEEEGGG--GCCGGGSTTCCSBCTTSCCCCCSHH
T ss_pred EEcccccc-ccccccCcccccccchhhhHHHHHHHHh--cccceEEeecceee--ecCcccCCCCCccccccCCCCCChh
Confidence 99999752 2233455678899999999999999999 78999999999999 886543 3567766643 457
Q ss_pred -HHHHHHHHHHHHHhh--cCCceEEEEEeceEEcCCCC---------cccchHHHH-HHHc--CCCC---------CCCc
Q 020476 165 -LAEVCREWEGTALKV--NKDVRLALIRIGIVLGKDGG---------ALAKMIPLF-MMFA--GGPL---------GSGQ 220 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~--~~~~~~~ilRp~~i~g~~~~---------~~~~~~~~~-~~~~--~~~~---------~~~~ 220 (325)
.+|...|.....+.+ ..+++++++||+.+||+... ....+++.+ .... ..++ .++.
T Consensus 154 ~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~~~ 233 (347)
T d1z45a2 154 GHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGT 233 (347)
T ss_dssp HHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSS
T ss_pred HhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCccccCCc
Confidence 778888876666544 35899999999999997431 112344443 2222 2232 3456
Q ss_pred ceeeeccHHHHHHHHHHHHcC-------CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceee
Q 020476 221 QWFSWIHLDDIVNLIYEALSN-------PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVV 293 (325)
Q Consensus 221 ~~~~~v~v~D~a~a~~~~~~~-------~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 293 (325)
..++++++.|.+.+++.++.. ....++||+++++++|+.|+++.+.+.+|.+..+...... .++
T Consensus 234 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~~----~~~----- 304 (347)
T d1z45a2 234 PIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPYKVTGRR----AGD----- 304 (347)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC------------------
T ss_pred eeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCceEeCCCC----CCC-----
Confidence 778899999999998888753 1134699999999999999999999999987543322211 121
Q ss_pred ccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 294 LEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 294 ~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
.....++++|+++ |||+|++ +++|+|+++++
T Consensus 305 ~~~~~~d~sk~~~~lGw~p~~-~lee~i~~ti~ 336 (347)
T d1z45a2 305 VLNLTAKPDRAKRELKWQTEL-QVEDSCKDLWK 336 (347)
T ss_dssp CCCCCBCCHHHHHHTCCCCCC-CHHHHHHHHHH
T ss_pred CCEeeECHHHHHHHHCCCCCC-CHHHHHHHHHH
Confidence 2234567788864 9999999 59999999874
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=2.9e-36 Score=266.57 Aligned_cols=294 Identities=17% Similarity=0.167 Sum_probs=203.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC----------CcccccCC-----------CCCccccCceeecCCch
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR----------SKAELIFP-----------GKKTRFFPGVMIAEEPQ 79 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~----------~~~~~~~~-----------~~~~~~~~~~d~~d~~~ 79 (325)
|||||||||||||++|+++|++.||+|++++.-. ........ ......+..+|+.|.+.
T Consensus 2 ~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~ 81 (393)
T d1i24a_ 2 SRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTGKSIELYVGDICDFEF 81 (393)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHCCCCEEEESCTTSHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhhcCCCcEEEEccCCCHHH
Confidence 7999999999999999999999999999996210 00000000 00001144679999999
Q ss_pred hHhhhC--CCCEEEECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCC-EEEEeeeeeeeecCCCCc--
Q 020476 80 WRDCIQ--GSTAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRP-SVLVSATALGYYGTSETE-- 152 (325)
Q Consensus 80 ~~~~~~--~~d~vi~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~-~v~~Ss~~v~~~g~~~~~-- 152 (325)
+.++++ ++|+|||+|+.... .......+..++.+|+.++.+++++|++ .+.++ +++.||..+ |+.....
T Consensus 82 l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~~i~~ss~~~--~~~~~~~~~ 157 (393)
T d1i24a_ 82 LAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKE--FGEECHLVKLGTMGE--YGTPNIDIE 157 (393)
T ss_dssp HHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEECCGGG--GCCCSSCBC
T ss_pred HHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHH--hccccceeecccccc--ccccccccc
Confidence 999987 67999999986532 2234455677889999999999999998 45554 555565555 6543211
Q ss_pred ----eecCC-------CC--CCCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc----------------c
Q 020476 153 ----VFDES-------SP--SGNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL----------------A 202 (325)
Q Consensus 153 ----~~~e~-------~~--~~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~----------------~ 202 (325)
..++. .+ +.+.| .+|...|.....+.+..+++++++||+.+||++.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~ 237 (393)
T d1i24a_ 158 EGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFG 237 (393)
T ss_dssp SSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTC
T ss_pred cccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCccccccccccccccccccccc
Confidence 11111 12 33468 8899999988888888899999999999999864321 1
Q ss_pred chHHHH--HHHcCCCC---CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEe--eCCCCCCHHHHHHHHHHHhCCCC-C
Q 020476 203 KMIPLF--MMFAGGPL---GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVING--TAPNPVRLAEMCDHLGNVLGRPS-W 274 (325)
Q Consensus 203 ~~~~~~--~~~~~~~~---~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~--~~~~~~s~~e~~~~i~~~~g~~~-~ 274 (325)
.++..+ +...+.++ +++.+.++|+|++|+++++..+++++...|.|++ .+++.+|+.|+++++.+..+... .
T Consensus 238 ~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~~g~~~~~~~~~~~~si~el~~~i~~~~~~~~~~ 317 (393)
T d1i24a_ 238 TALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAKAGEFRVFNQFTEQFSVNELASLVTKAGSKLGLD 317 (393)
T ss_dssp CHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCCTTCEEEEEECSEEEEHHHHHHHHHHHHHTTTCC
T ss_pred cchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcccceeeeecCCCCeeEHHHHHHHHHHHHHhhCCC
Confidence 223333 45566664 7899999999999999999999998877776554 44567999999999988865321 1
Q ss_pred CCccHHHHHHHhCccceeeccCcccChhHHHHcCCCcccccHHHHHHHHh
Q 020476 275 LPVPEFALKAVLGEGAFVVLEGQRVVPARAKELGFPFKYRYVKDALKAIM 324 (325)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~lg~~p~~~~~~~~l~~~~ 324 (325)
+...... .............+++|+++|||+|++ +++++|++++
T Consensus 318 ~~~~~~~-----~~~~~~~~~~~~~d~~k~~~LGw~P~~-~~~~~i~~~~ 361 (393)
T d1i24a_ 318 VKKMTVP-----NPRVEAEEHYYNAKHTKLMELGLEPHY-LSDSLLDSLL 361 (393)
T ss_dssp CCEEEEC-----CSSCSCSSCCCCBCCCHHHHTTCCCCC-CCHHHHHHHH
T ss_pred cceeecc-----CCCCCCCccEecCCHHHHHHcCCcccc-CHHHHHHHHH
Confidence 1111000 000011122345567778889999999 5999999876
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=1.7e-36 Score=262.89 Aligned_cols=293 Identities=16% Similarity=0.126 Sum_probs=206.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc-----ccCCC-----CCccccCceeecCCchhHhhhC--CC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE-----LIFPG-----KKTRFFPGVMIAEEPQWRDCIQ--GS 87 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----~~~~~-----~~~~~~~~~d~~d~~~~~~~~~--~~ 87 (325)
++++||||||||||++|+++|+++||+|++++|..+... .+... .....+..+|+.+.+.+.+.++ ++
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~ 80 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKP 80 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCC
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhcc
Confidence 368999999999999999999999999999999654211 11100 0001123467778888888775 78
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC---CCCCCEEEEeeeeeeeecCCCCceecCCCCCC--C
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP---EGVRPSVLVSATALGYYGTSETEVFDESSPSG--N 162 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~---~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~--~ 162 (325)
|+|||+|+... .....+++...+..|+.++.+++++++... ....++++.||+.+ |+.. ..+++|+++.. .
T Consensus 81 D~Vih~Aa~~~-~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~--~~~~-~~~~~E~~~~~p~~ 156 (339)
T d1n7ha_ 81 DEVYNLAAQSH-VAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEM--FGST-PPPQSETTPFHPRS 156 (339)
T ss_dssp SEEEECCSCCC-HHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGG--GTTS-CSSBCTTSCCCCCS
T ss_pred chhhhcccccc-ccccccCccccccccccccchhhhhhhhcccccccceeeeeccccee--cccC-CCCCCCCCCCCCcc
Confidence 99999999642 222345677888999999999999886520 12334566666655 5543 45678888754 4
Q ss_pred ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH-HHHcCC-C---CCCCcceeeeccHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF-MMFAGG-P---LGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~-~~~~~~-~---~~~~~~~~~~v~v~D~a~ 233 (325)
.| .+|...|.....+.+.++++++++||++||||..+.. ..+.... ....+. + .+++.+.++++|++|+|+
T Consensus 157 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~ 236 (339)
T d1n7ha_ 157 PYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVE 236 (339)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHH
Confidence 67 7888888888888888899999999999999964321 1122222 222232 2 278899999999999999
Q ss_pred HHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCC
Q 020476 234 LIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFP 310 (325)
Q Consensus 234 a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~ 310 (325)
++..+++++. .+.+++..+...+..++++.+.+.++.... +.+.... ..+.......++++|+++ |||+
T Consensus 237 ~~~~~~~~~~-~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-------~r~~~~~~~~~d~~Kak~~LGw~ 308 (339)
T d1n7ha_ 237 AMWLMLQQEK-PDDYVVATEEGHTVEEFLDVSFGYLGLNWKDYVEIDQRY-------FRPAEVDNLQGDASKAKEVLGWK 308 (339)
T ss_dssp HHHHHHTSSS-CCEEEECCSCEEEHHHHHHHHHHHTTCCGGGTEEECGGG-------SCSSCCCBCCBCCHHHHHHHCCC
T ss_pred HHHHHHhcCC-CCccccccccccccchhhhhhhhhhhcccCceeeeccCC-------CCCCCCCeeeECHHHHHHHHCCC
Confidence 9999999875 456667778889999999999999997532 1111100 011112234557888865 8999
Q ss_pred cccccHHHHHHHHhC
Q 020476 311 FKYRYVKDALKAIMS 325 (325)
Q Consensus 311 p~~~~~~~~l~~~~~ 325 (325)
|++ +++++|+++++
T Consensus 309 P~~-~le~gi~~ti~ 322 (339)
T d1n7ha_ 309 PQV-GFEKLVKMMVD 322 (339)
T ss_dssp CCS-CHHHHHHHHHH
T ss_pred cCC-CHHHHHHHHHH
Confidence 999 59999999873
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=100.00 E-value=1e-35 Score=262.00 Aligned_cols=289 Identities=16% Similarity=0.162 Sum_probs=206.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCCccccc---C----------------C--CCCccccCceeecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRSKAELI---F----------------P--GKKTRFFPGVMIAEE 77 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~~~~~~---~----------------~--~~~~~~~~~~d~~d~ 77 (325)
.|||||||||||||++|+++|++ .|++|+++++-....... . . ......+..+|+.|.
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d~ 81 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNE 81 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCH
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhhccccccccccceEEEECcccCH
Confidence 47999999999999999999986 689999997511110000 0 0 000011345788899
Q ss_pred chhHhhhC---CCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCc--
Q 020476 78 PQWRDCIQ---GSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE-- 152 (325)
Q Consensus 78 ~~~~~~~~---~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~-- 152 (325)
+.+.++++ ++|+|||+|+... ...........+..|+.++.++++++++ .++++++++||..+ |+.....
T Consensus 82 ~~l~~~~~~~~~~d~ViH~Aa~~~-~~~~~~~~~~~~~~N~~~t~~~l~~~~~--~~~~~~~~~~s~~~--~~~~~~~~~ 156 (383)
T d1gy8a_ 82 DFLNGVFTRHGPIDAVVHMCAFLA-VGESVRDPLKYYDNNVVGILRLLQAMLL--HKCDKIIFSSSAAI--FGNPTMGSV 156 (383)
T ss_dssp HHHHHHHHHSCCCCEEEECCCCCC-HHHHHHCHHHHHHHHHHHHHHHHHHHHH--TTCCEEEEEEEGGG--TBSCCC---
T ss_pred HHhhhhhhccceeehhhccccccc-ccccccccccccccccccccccchhhhc--cCCccccccccccc--ccccccccc
Confidence 88888874 6799999999652 2233445677888999999999999999 78899999999988 6644332
Q ss_pred -----eecCCCCC--CCch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcc--------cchHHHH--HHH---
Q 020476 153 -----VFDESSPS--GNDY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGAL--------AKMIPLF--MMF--- 211 (325)
Q Consensus 153 -----~~~e~~~~--~~~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~--------~~~~~~~--~~~--- 211 (325)
++.|+++. ...| .+|...|.....+.+.++++++++||+.+||++.... ..+++.+ +..
T Consensus 157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~ 236 (383)
T d1gy8a_ 157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI 236 (383)
T ss_dssp --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence 34455543 4567 7888888888888888899999999999999975321 1222222 110
Q ss_pred -------------cCCC---------CCCCcceeeeccHHHHHHHHHHHHcCC---------CCCceEEeeCCCCCCHHH
Q 020476 212 -------------AGGP---------LGSGQQWFSWIHLDDIVNLIYEALSNP---------SYRGVINGTAPNPVRLAE 260 (325)
Q Consensus 212 -------------~~~~---------~~~~~~~~~~v~v~D~a~a~~~~~~~~---------~~~~~~~~~~~~~~s~~e 260 (325)
.+.+ .+++.+.|+|+|++|+|+++..+++.. ...++||+++++++|+.|
T Consensus 237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e 316 (383)
T d1gy8a_ 237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE 316 (383)
T ss_dssp SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence 1111 145788899999999999999988631 134599999999999999
Q ss_pred HHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHH
Q 020476 261 MCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAI 323 (325)
Q Consensus 261 ~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~ 323 (325)
+++.+.+.+|.+..+..... ..++. .....+++|+++ |||+|++ +++|+|.++
T Consensus 317 l~~~i~~~~~~~~~~~~~~~----~~~d~-----~~~~~d~~k~~k~LGw~P~~-~l~e~i~~t 370 (383)
T d1gy8a_ 317 VIEVARKTTGHPIPVRECGR----REGDP-----AYLVAASDKAREVLGWKPKY-DTLEAIMET 370 (383)
T ss_dssp HHHHHHHHHCCCCCEEEECC----CTTCC-----SEECBCCHHHHHHTCCCCSC-CSHHHHHHH
T ss_pred HHHHHHHHhCCCCceEECCC----CCCCc-----CEeeeCHHHHHHHHCCccCC-CHHHHHHHH
Confidence 99999999997643322110 01221 223446778865 9999999 599999886
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=100.00 E-value=1.2e-36 Score=256.94 Aligned_cols=270 Identities=14% Similarity=0.085 Sum_probs=204.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|||||||||||||++|+++|.++||+|++++|+. +|+.|.+.+.++++ ++|+|||+|+..
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~-----------------~D~~d~~~~~~~l~~~~~d~vih~a~~~- 63 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD-----------------LDITNVLAVNKFFNEKKPNVVINCAAHT- 63 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT-----------------CCTTCHHHHHHHHHHHCCSEEEECCCCC-
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh-----------------ccCCCHHHHHHHHHHcCCCEEEeecccc-
Confidence 7999999999999999999999999999998854 57888999988886 789999999864
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTAL 177 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~ 177 (325)
........+......|+.....+++.+.. ....++++||+.+ |+.....+.+|.+++.+.. +.+.+...+. +
T Consensus 64 ~~~~~~~~~~~~~~~n~~~~~~~~~~~~~---~~~~~~~~ss~~v--~~~~~~~~~~e~~~~~~~~~~~~~k~~~e~--~ 136 (281)
T d1vl0a_ 64 AVDKCEEQYDLAYKINAIGPKNLAAAAYS---VGAEIVQISTDYV--FDGEAKEPITEFDEVNPQSAYGKTKLEGEN--F 136 (281)
T ss_dssp CHHHHHHCHHHHHHHHTHHHHHHHHHHHH---HTCEEEEEEEGGG--SCSCCSSCBCTTSCCCCCSHHHHHHHHHHH--H
T ss_pred ccccccccchhhccccccccccccccccc---cccccccccccee--eeccccccccccccccchhhhhhhhhHHHH--H
Confidence 22334455677788999999999998887 4567888999888 8888888888888765543 3333232222 2
Q ss_pred hhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEeeCCCCC
Q 020476 178 KVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGTAPNPV 256 (325)
Q Consensus 178 ~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
....+.+++++||+++||++......++. ....+.++ ..++..++++|++|+++++..+++++. .|+||+++++.+
T Consensus 137 ~~~~~~~~~i~R~~~vyG~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~v~D~~~~~~~~~~~~~-~g~~~~~~~~~~ 213 (281)
T d1vl0a_ 137 VKALNPKYYIVRTAWLYGDGNNFVKTMIN--LGKTHDELKVVHDQVGTPTSTVDLARVVLKVIDEKN-YGTFHCTCKGIC 213 (281)
T ss_dssp HHHHCSSEEEEEECSEESSSSCHHHHHHH--HHHHCSEEEEESSCEECCEEHHHHHHHHHHHHHHTC-CEEEECCCBSCE
T ss_pred HHHhCCCccccceeEEeCCCcccccchhh--hhccCCceeecCCceeccchhhhhhhhhhhhhhhcc-cCceeEeCCCcc
Confidence 23357899999999999998654322222 23334433 345688999999999999999998875 689999999999
Q ss_pred CHHHHHHHHHHHhCCCCCC-CccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 257 RLAEMCDHLGNVLGRPSWL-PVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 257 s~~e~~~~i~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
|+.|+++.+++.+|++..+ +++... ++.... ......++++|+++ +||+|+ +|+++|+++++
T Consensus 214 s~~e~~~~i~~~~g~~~~i~~i~~~~----~~~~a~-rp~~~~ld~~k~~~~~g~~~~--~~~~~l~~~l~ 277 (281)
T d1vl0a_ 214 SWYDFAVEIFRLTGIDVKVTPCTTEE----FPRPAK-RPKYSVLRNYMLELTTGDITR--EWKESLKEYID 277 (281)
T ss_dssp EHHHHHHHHHHHHCCCCEEEEECSTT----SCCSSC-CCSBCCBCCHHHHHTTCCCCC--BHHHHHHHHHH
T ss_pred chHHHHHHHHHHhCCCceEEeccHHH----cCCcCC-CccccccCHHHHHHHhCCCCC--CHHHHHHHHHH
Confidence 9999999999999987432 333221 111111 11234578899965 899998 69999999874
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=100.00 E-value=1.4e-34 Score=250.80 Aligned_cols=292 Identities=17% Similarity=0.108 Sum_probs=202.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC------CCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF------PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~------~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
.++|||||||||||++|+++|+++|++|++++|+.++..... ...........|+.|.+.+.+++.++|+|+|+
T Consensus 11 gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~v~~~ 90 (342)
T d1y1pa1 11 GSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVAHI 90 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEEEC
T ss_pred cCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccchhhhhh
Confidence 369999999999999999999999999999999765433211 01100012346888999999999999999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCC--CceecCCC-------------
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSE--TEVFDESS------------- 158 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~--~~~~~e~~------------- 158 (325)
|+.... ...+...+..|+.++.+++++|++. .+++++||+||..+..++... +...+|+.
T Consensus 91 a~~~~~----~~~~~~~~~~nv~gt~~ll~~~~~~-~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~ 165 (342)
T d1y1pa1 91 ASVVSF----SNKYDEVVTPAIGGTLNALRAAAAT-PSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNLESIDKAKTLP 165 (342)
T ss_dssp CCCCSC----CSCHHHHHHHHHHHHHHHHHHHHTC-TTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCHHHHHHHHHSC
T ss_pred cccccc----cccccccccchhhhHHHHHHhhhcc-cccccccccccceeeccCCCCCCCcccccccccccccccccccc
Confidence 986422 2335667789999999999999884 468999999998753222221 12233332
Q ss_pred ---CC--CCch-HHHHHHHHHHHHHhhcC--CceEEEEEeceEEcCCCCc--cc-chHHHH-HHHcCCCC--CCCcceee
Q 020476 159 ---PS--GNDY-LAEVCREWEGTALKVNK--DVRLALIRIGIVLGKDGGA--LA-KMIPLF-MMFAGGPL--GSGQQWFS 224 (325)
Q Consensus 159 ---~~--~~~y-~~k~~~~~~~~~~~~~~--~~~~~ilRp~~i~g~~~~~--~~-~~~~~~-~~~~~~~~--~~~~~~~~ 224 (325)
+. ...| .+|...|...+.+.++. +++++++||+.+||+...+ .. ...... ....+... ..+...++
T Consensus 166 e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~ 245 (342)
T d1y1pa1 166 ESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVSPALALMPPQY 245 (342)
T ss_dssp TTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCCHHHHTCCSEE
T ss_pred ccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcCcccCCcccee
Confidence 21 1246 77888887776665543 6788999999999985321 11 122222 33444432 34556689
Q ss_pred eccHHHHHHHHHHHHcCCCCCceEEeeCCCCCCHHHHHHHHHHHhCCC-CCCCccHHHHHHHhCccceeeccCcccChhH
Q 020476 225 WIHLDDIVNLIYEALSNPSYRGVINGTAPNPVRLAEMCDHLGNVLGRP-SWLPVPEFALKAVLGEGAFVVLEGQRVVPAR 303 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k 303 (325)
++|++|+|++++.+++++...|.|++++++.+|+.|+++.+.+.+... .....+. .......-......++
T Consensus 246 ~v~v~Dva~~~i~~l~~~~~~g~~~~~~~~~~t~~eia~~i~k~~p~~~~~~~~~~--------~~~~~~~~~~~~s~~~ 317 (342)
T d1y1pa1 246 YVSAVDIGLLHLGCLVLPQIERRRVYGTAGTFDWNTVLATFRKLYPSKTFPADFPD--------QGQDLSKFDTAPSLEI 317 (342)
T ss_dssp EEEHHHHHHHHHHHHHCTTCCSCEEEECCEEECHHHHHHHHHHHCTTSCCCCCCCC--------CCCCCCEECCHHHHHH
T ss_pred eeeHHHHHHHHHHhhcCccccceEEEEcCCceEHHHHHHHHHHHcCCCcCCccCCc--------cCcccccccchHHHHH
Confidence 999999999999999998888888899999999999999999988432 1111111 1111111112223455
Q ss_pred HHHcCCCcccccHHHHHHHHhC
Q 020476 304 AKELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 304 ~~~lg~~p~~~~~~~~l~~~~~ 325 (325)
++.+||.|.+ +++++|+++++
T Consensus 318 ~k~lg~~~~~-~lee~i~d~I~ 338 (342)
T d1y1pa1 318 LKSLGRPGWR-SIEESIKDLVG 338 (342)
T ss_dssp HHHTTCCSCC-CHHHHHHHHHC
T ss_pred HHHcCCCCCc-CHHHHHHHHHH
Confidence 5789999988 59999999985
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=100.00 E-value=3.4e-34 Score=249.86 Aligned_cols=294 Identities=17% Similarity=0.178 Sum_probs=205.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
..|||||||||||||++|+++|++.|++|++++|+.++...... ......+..+|+.|++.+.++++ .+|+|+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~ 86 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM 86 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence 35799999999999999999999999999999998765443211 11111245678999999988876 68999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC--CCch-HHHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS--GNDY-LAEVCR 170 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~--~~~y-~~k~~~ 170 (325)
|+... .......+...+.+|+.++.++++++++ .+..++++.+|+++..++.....+.+|+.+. ...| ..|...
T Consensus 87 aa~~~-~~~~~~~~~~~~~~Nv~g~~n~l~~~~~--~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~y~~~k~~~ 163 (356)
T d1rkxa_ 87 AAQPL-VRLSYSEPVETYSTNVMGTVYLLEAIRH--VGGVKAVVNITSDKCYDNKEWIWGYRENEAMGGYDPYSNSKGCA 163 (356)
T ss_dssp CSCCC-HHHHHHCHHHHHHHHTHHHHHHHHHHHH--HCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCCSSHHHHHHHHH
T ss_pred hcccc-ccccccCCccccccccccchhhhhhhhc--cccccccccccccccccccccccccccccccCCCCccccccccc
Confidence 98642 2223456788899999999999999998 4555555666655533444444566666553 3445 555555
Q ss_pred HHHHHHHhh---------cCCceEEEEEeceEEcCCCCcccchHHHH-HHHcC-CCC--CCCcceeeeccHHHHHHHHHH
Q 020476 171 EWEGTALKV---------NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAG-GPL--GSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 171 ~~~~~~~~~---------~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~-~~~--~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+.....+.. ..++.++++||+.+||+++.....+.+.+ +...+ .++ +.+.+.++++|++|++.++..
T Consensus 164 e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~ 243 (356)
T d1rkxa_ 164 ELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLL 243 (356)
T ss_dssp HHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHH
T ss_pred hhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeeccccccccccccccchhhh
Confidence 544443332 24789999999999999875555555544 33333 332 778899999999999999999
Q ss_pred HHcCCCC-----CceE--EeeCCCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCcccChhHHH-HcCC
Q 020476 238 ALSNPSY-----RGVI--NGTAPNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRVVPARAK-ELGF 309 (325)
Q Consensus 238 ~~~~~~~-----~~~~--~~~~~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~-~lg~ 309 (325)
++.++.. .... +...+..+++.++++.+.+.++....+....... .. ......+|++|++ +|||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~---~~-----~~~~~~~d~skak~~LGw 315 (356)
T d1rkxa_ 244 LAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGASWQLDGNAH---PH-----EAHYLKLDCSKAKMQLGW 315 (356)
T ss_dssp HHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCCEEC---------------CCCCCCBCCHHHHHHHCC
T ss_pred hhhhhcccccccccccccccccccccccchhhhhhHHHhCCCccEEEcCCCC---CC-----CcCeeeEcHHHHHHHHCC
Confidence 8876431 2223 3334567899999999999999775443322111 11 1233457788886 4999
Q ss_pred CcccccHHHHHHHHh
Q 020476 310 PFKYRYVKDALKAIM 324 (325)
Q Consensus 310 ~p~~~~~~~~l~~~~ 324 (325)
+|++ +++++|++++
T Consensus 316 ~P~~-~l~egi~~ti 329 (356)
T d1rkxa_ 316 HPRW-NLNTTLEYIV 329 (356)
T ss_dssp CCCC-CHHHHHHHHH
T ss_pred CcCC-CHHHHHHHHH
Confidence 9999 5999999986
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=100.00 E-value=5.1e-34 Score=246.89 Aligned_cols=289 Identities=16% Similarity=0.129 Sum_probs=200.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-----cCCCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-----IFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-----~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
||||||||||||++|+++|+++|++|+++++-...... .... ....+..+|+.|.+.+.++++ ++|+|||+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~~~-~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a 80 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSSL-GNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA 80 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhhcc-CCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence 89999999999999999999999999999753222111 1111 011245679999999999886 479999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceec----------------CCC
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFD----------------ESS 158 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~----------------e~~ 158 (325)
+.... .....++...+++|+.+|.+|++++.+ .+++++++.||+++. ++.....+.. +..
T Consensus 81 a~~~~-~~~~~~~~~~~~~Nv~gt~nll~~~~~--~~~~~~i~~sS~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (338)
T d1orra_ 81 GQVAM-TTSIDNPCMDFEINVGGTLNLLEAVRQ--YNSNCNIIYSSTNKV-YGDLEQYKYNETETRYTCVDKPNGYDEST 156 (338)
T ss_dssp CCCCH-HHHHHCHHHHHHHHHHHHHHHHHHHHH--HCTTCEEEEEEEGGG-GTTCTTSCEEECSSCEEETTCTTCBCTTS
T ss_pred ccccc-cccccChHHHHHHHHHHHHHHHHhhhc--ccccccccccccccc-cccccccccccccccccccccccCcccCC
Confidence 97522 223345678899999999999999999 788888888887762 4433322211 111
Q ss_pred CCCC--ch-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCC--cccchHHHH-----HHH--cCCCC---CCCccee
Q 020476 159 PSGN--DY-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGG--ALAKMIPLF-----MMF--AGGPL---GSGQQWF 223 (325)
Q Consensus 159 ~~~~--~y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~--~~~~~~~~~-----~~~--~~~~~---~~~~~~~ 223 (325)
+..+ .| ..|...+..........+....++|++.+|++... ........+ ... .+.++ +++.+.+
T Consensus 157 ~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r 236 (338)
T d1orra_ 157 QLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVR 236 (338)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEE
T ss_pred ccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCceEEeCCCceeE
Confidence 2222 34 55666666666666677999999999999977532 111222221 111 23443 7888999
Q ss_pred eeccHHHHHHHHHHHHcCCC--CCceEEeeC--CCCCCHHHHHHHHHHHhCCCCCCCccHHHHHHHhCccceeeccCccc
Q 020476 224 SWIHLDDIVNLIYEALSNPS--YRGVINGTA--PNPVRLAEMCDHLGNVLGRPSWLPVPEFALKAVLGEGAFVVLEGQRV 299 (325)
Q Consensus 224 ~~v~v~D~a~a~~~~~~~~~--~~~~~~~~~--~~~~s~~e~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
+++|++|++++++.+++++. .+++|++.. +..+++.|+++.+.+..|.+..+..... ..++. ....+
T Consensus 237 ~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~~~~~~~----~~~~~-----~~~~~ 307 (338)
T d1orra_ 237 DVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMRFTNLPV----RESDQ-----RVFVA 307 (338)
T ss_dssp ECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCCEEEECC----CSSCC-----SEECB
T ss_pred eeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCceeEeCCC----CCCCc-----CeeeE
Confidence 99999999999999998754 456899855 4578999999999999997643211100 01111 12345
Q ss_pred ChhHHH-HcCCCcccccHHHHHHHHhC
Q 020476 300 VPARAK-ELGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 300 ~~~k~~-~lg~~p~~~~~~~~l~~~~~ 325 (325)
+++|++ .|||+|++ +++|+|+++++
T Consensus 308 d~~k~~~~Lg~~p~~-sl~e~i~~ti~ 333 (338)
T d1orra_ 308 DIKKITNAIDWSPKV-SAKDGVQKMYD 333 (338)
T ss_dssp CCHHHHHHHCCCCCS-CHHHHHHHHHH
T ss_pred CHHHHHHHHCCCcCC-CHHHHHHHHHH
Confidence 778886 59999999 59999999874
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=2.4e-31 Score=226.71 Aligned_cols=279 Identities=14% Similarity=0.134 Sum_probs=184.2
Q ss_pred EEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccc--cCCCCCccccCceeecCCchhH-h-----hhCCCCEEEEC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWR-D-----CIQGSTAVVNL 93 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~d~~~~~-~-----~~~~~d~vi~~ 93 (325)
|||||||||||++|+++|+++|+ +|+++++-...... ... ....|..+.+.+. . .+..+++|+|+
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 75 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVD------LNIADYMDKEDFLIQIMAGEEFGDVEAIFHE 75 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHHT------SCCSEEEEHHHHHHHHHTTCCCSSCCEEEEC
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhcccc------cchhhhccchHHHHHHhhhhcccchhhhhhh
Confidence 89999999999999999999995 79998753332211 111 2223444333222 2 22468999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC--CCCCCch-HHHHHH
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES--SPSGNDY-LAEVCR 170 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~--~~~~~~y-~~k~~~ 170 (325)
|+... ....+.......|+.++.+++++++. .++ ++++.||+.+ ++.......+++ .++...| .+|...
T Consensus 76 aa~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~--~~i-~~v~~ss~~~--~~~~~~~~~~~~~~~~~~~~Y~~~K~~~ 147 (307)
T d1eq2a_ 76 GACSS---TTEWDGKYMMDNNYQYSKELLHYCLE--REI-PFLYASSAAT--YGGRTSDFIESREYEKPLNVYGYSKFLF 147 (307)
T ss_dssp CSCCC---TTCCCHHHHHHHTHHHHHHHHHHHHH--HTC-CEEEEEEGGG--GTTCCSCBCSSGGGCCCSSHHHHHHHHH
T ss_pred ccccc---cccccccccccccccccccccccccc--ccc-cccccccccc--cccccccccccccccccccccccccchh
Confidence 98542 23345567788999999999999998 555 5778888877 554444433333 3455677 889889
Q ss_pred HHHHHHHhhcCCceEEEEEeceEEcCCCCcc---cchHHHH--HHHcCCCC----CCCcceeeeccHHHHHHHHHHHHcC
Q 020476 171 EWEGTALKVNKDVRLALIRIGIVLGKDGGAL---AKMIPLF--MMFAGGPL----GSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~---~~~~~~~--~~~~~~~~----~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
|.....+.++.+++++++||+.+|||..... ..+...+ ....+... +++...++++|++|++.++..++++
T Consensus 148 e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~ 227 (307)
T d1eq2a_ 148 DEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLEN 227 (307)
T ss_dssp HHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHH
T ss_pred hhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHHHHhhh
Confidence 9999999888999999999999999975322 2233322 23333332 6777889999999999999999987
Q ss_pred CCCCceEEeeCCCCCCHHHHHHHHHHHhCCCCC--CCccHHHHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHH
Q 020476 242 PSYRGVINGTAPNPVRLAEMCDHLGNVLGRPSW--LPVPEFALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKD 318 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~s~~e~~~~i~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~ 318 (325)
+. .+.||++++++.|++|+++.+.+..++... ++.+..... ........+++|+++ +||+|++ +++|
T Consensus 228 ~~-~~~~~~~~~~~~si~~i~~~i~~~~~~~~i~~~~~~~~~~~--------~~~~~~~~d~~k~~~~~~~~p~~-sl~e 297 (307)
T d1eq2a_ 228 GV-SGIFNLGTGRAESFQAVADATLAYHKKGQIEYIPFPDKLKG--------RYQAFTQADLTNLRAAGYDKPFK-TVAE 297 (307)
T ss_dssp CC-CEEEEESCSCCBCHHHHHHHC-----------------------------CCCSCCBCCHHHHHTTCCCCCC-CHHH
T ss_pred cc-ccccccccccchhHHHHHHHHHHhcCCCCeeEeeCCccCCC--------CCceeeecCHHHHHHHHCCCCCC-CHHH
Confidence 64 689999999999999999999887764321 222221111 112223457788865 7999999 5999
Q ss_pred HHHHHhC
Q 020476 319 ALKAIMS 325 (325)
Q Consensus 319 ~l~~~~~ 325 (325)
+|+++++
T Consensus 298 gi~~~i~ 304 (307)
T d1eq2a_ 298 GVTEYMA 304 (307)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.98 E-value=3e-32 Score=231.46 Aligned_cols=277 Identities=13% Similarity=0.102 Sum_probs=187.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAGTPI 98 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~~~~ 98 (325)
|||||||||||||++|++.|.+.|+.| ++++... ....|+.|.+.+.++++ ++|+||||||...
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~-------------~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~~ 66 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSK-------------EFCGDFSNPKGVAETVRKLRPDVIVNAAAHTA 66 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCS-------------SSCCCTTCHHHHHHHHHHHCCSEEEECCCCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCc-------------cccCcCCCHHHHHHHHHHcCCCEEEEeccccc
Confidence 799999999999999999999988654 4444332 12368889999998886 6799999999652
Q ss_pred CCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC--ch-HHHHHHHHHHH
Q 020476 99 GTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN--DY-LAEVCREWEGT 175 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~--~y-~~k~~~~~~~~ 175 (325)
.......+...+..|+.++.++++++++ .+ .+++++||+.+ |+.....+.+|++++.+ .| ..|...|...
T Consensus 67 -~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~-~~~~~~ss~~~--~~~~~~~~~~E~~~~~p~~~y~~~k~~~e~~~- 139 (298)
T d1n2sa_ 67 -VDKAESEPELAQLLNATSVEAIAKAANE--TG-AWVVHYSTDYV--FPGTGDIPWQETDATSPLNVYGKTKLAGEKAL- 139 (298)
T ss_dssp -HHHHTTCHHHHHHHHTHHHHHHHHHHTT--TT-CEEEEEEEGGG--SCCCTTCCBCTTSCCCCSSHHHHHHHHHHHHH-
T ss_pred -ccccccCccccccccccccccchhhhhc--cc-ccccccccccc--ccCCCCCCCccccccCCCchHhhhhhhhhhhH-
Confidence 2234556778889999999999999998 44 57889999988 77777788899888655 34 3443333332
Q ss_pred HHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHHHc----CCCCCceEEe
Q 020476 176 ALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALS----NPSYRGVING 250 (325)
Q Consensus 176 ~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~----~~~~~~~~~~ 250 (325)
.. ......++|++..++..+......+.. ......++ ..+...++++++.|+++++..++. .+...++||+
T Consensus 140 -~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~~~~~~~n~ 215 (298)
T d1n2sa_ 140 -QD--NCPKHLIFRTSWVYAGKGNNFAKTMLR-LAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKPEVAGLYHL 215 (298)
T ss_dssp -HH--HCSSEEEEEECSEECSSSCCHHHHHHH-HHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCGGGCEEEEC
T ss_pred -Hh--hhcccccccccceeeccCCccchhhhh-hhcccceeecccceeecccccchHHHHHHHHHhhhhccccccccccc
Confidence 22 233456666666665433322221111 22233333 345567889999999999888775 4446789999
Q ss_pred eCCCCCCHHHHHHHHHHHhCCCCC-CCccHH--HHHHHhCccceeeccCcccChhHHHH-cCCCcccccHHHHHHHHhC
Q 020476 251 TAPNPVRLAEMCDHLGNVLGRPSW-LPVPEF--ALKAVLGEGAFVVLEGQRVVPARAKE-LGFPFKYRYVKDALKAIMS 325 (325)
Q Consensus 251 ~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~-lg~~p~~~~~~~~l~~~~~ 325 (325)
++++.+++.++++.+.+..+.... ...+.. .....+..... ......+|++|+++ +||+|+ +|+++|+++++
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~i~~~~~~~~a~-RP~~~~ld~~K~~~~~~~~~~--~~~~gl~~~i~ 291 (298)
T d1n2sa_ 216 VAGGTTTWHDYAALVFDEARKAGITLALTELNAVPTSAYPTPAS-RPGNSRLNTEKFQRNFDLILP--QWELGVKRMLT 291 (298)
T ss_dssp CCBSCEEHHHHHHHHHHHHHHHTCCCCCCEEEEECSTTSCCSSC-CCSBCCBCCHHHHHHHTCCCC--BHHHHHHHHHH
T ss_pred cCCCceecHHHHHHHHhhhhccCccccccceeeeehhhcCccCC-CccccccCHHHHHHHHCCCCC--cHHHHHHHHHH
Confidence 999999999999999887754311 111100 00000000000 11234678899965 899998 69999999873
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.96 E-value=3.7e-29 Score=213.49 Aligned_cols=240 Identities=15% Similarity=0.135 Sum_probs=164.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC------CCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.++||||||||||||++|+++|+++||+|++++|++........ .........+|+.|.+.+.+++++++++++
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~ 81 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVIS 81 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhh
Confidence 35789999999999999999999999999999997654321100 000011445788899999999999999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHH
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREW 172 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~ 172 (325)
+++.... ..|..++.++++++++ .+..++++.||.++ ++.... .+. .....+...+.
T Consensus 82 ~~~~~~~------------~~~~~~~~~~l~~a~~--~~~~~~v~~Ss~g~--~~~~~~------~~~-~~~~~~~~~~~ 138 (312)
T d1qyda_ 82 ALAGGVL------------SHHILEQLKLVEAIKE--AGNIKRFLPSEFGM--DPDIME------HAL-QPGSITFIDKR 138 (312)
T ss_dssp CCCCSSS------------STTTTTHHHHHHHHHH--SCCCSEEECSCCSS--CTTSCC------CCC-SSTTHHHHHHH
T ss_pred hhhhccc------------ccchhhhhHHHHHHHH--hcCCcEEEEeeccc--cCCCcc------ccc-chhhhhhHHHH
Confidence 9875321 2456667788888888 67788888887655 332211 111 11112222333
Q ss_pred HHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC--CCCCcceeeeccHHHHHHHHHHHHcCCCC-Cc-eE
Q 020476 173 EGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP--LGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG-VI 248 (325)
Q Consensus 173 ~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~-~~ 248 (325)
....+....+++++++||+.+||+.......+........... ++++++.++++|++|+|++++.++.++.. ++ +|
T Consensus 139 ~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~ 218 (312)
T d1qyda_ 139 KVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMY 218 (312)
T ss_dssp HHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGGSSSEEE
T ss_pred HHHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCccccCceEE
Confidence 3334445568999999999999975433222211111111111 37888999999999999999999988774 34 46
Q ss_pred EeeCCCCCCHHHHHHHHHHHhCCCC-CCCccHHH
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLGRPS-WLPVPEFA 281 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g~~~-~~~~~~~~ 281 (325)
++++++.+|++|+++.+++.+|++. ...+|...
T Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~~i~~~~ 252 (312)
T d1qyda_ 219 IRPPMNILSQKEVIQIWERLSEQNLDKIYISSQD 252 (312)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHTCCCEECCBCSHH
T ss_pred EeCCCcCCCHHHHHHHHHHHHCCCCeEEECCHHH
Confidence 6666778999999999999999873 34555443
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.5e-28 Score=196.58 Aligned_cols=216 Identities=15% Similarity=0.105 Sum_probs=153.1
Q ss_pred HHHHHHHhhhcCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCC
Q 020476 9 LLTFCRLLQASQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQG 86 (325)
Q Consensus 9 ~~~~~~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~ 86 (325)
.+.+.....+++++|||||||||||++|+++|+++|. +|++++|++.+........ .....+|+.+.+.+.+++++
T Consensus 3 ~~~~~~~~~m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~~~~--i~~~~~D~~~~~~~~~~~~~ 80 (232)
T d2bkaa1 3 LSKLREDFRMQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEAYKN--VNQEVVDFEKLDDYASAFQG 80 (232)
T ss_dssp HHHHHHHHHHTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGGGGG--CEEEECCGGGGGGGGGGGSS
T ss_pred hHHHHHHhCCCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccccce--eeeeeecccccccccccccc
Confidence 4566667777788999999999999999999999984 8999999875533222110 01223567778888888999
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
+|+||||+|.. ........++++|+.++.+++++|++ .++++|||+||.++ ++.. ...| .
T Consensus 81 ~d~vi~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~fi~~Ss~~~--~~~~-----------~~~Y~~ 141 (232)
T d2bkaa1 81 HDVGFCCLGTT----RGKAGAEGFVRVDRDYVLKSAELAKA--GGCKHFNLLSSKGA--DKSS-----------NFLYLQ 141 (232)
T ss_dssp CSEEEECCCCC----HHHHHHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTTC-----------SSHHHH
T ss_pred ccccccccccc----ccccchhhhhhhcccccceeeecccc--cCccccccCCcccc--ccCc-----------cchhHH
Confidence 99999999853 23445677889999999999999999 78999999999887 4322 2334 4
Q ss_pred HHHHHHHHHHHHhhcCCc-eEEEEEeceEEcCCCCcccchHHH-HHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 166 AEVCREWEGTALKVNKDV-RLALIRIGIVLGKDGGALAKMIPL-FMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~~~~-~~~ilRp~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
.|. +.|.... +.+. +++|+||+.+||+..... .... ..... ..+.........++++|+|++++.++.++.
T Consensus 142 ~K~--~~E~~l~--~~~~~~~~IlRP~~i~G~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~ 214 (232)
T d2bkaa1 142 VKG--EVEAKVE--ELKFDRYSVFRPGVLLCDRQESR--PGEWLVRKFF-GSLPDSWASGHSVPVVTVVRAMLNNVVRPR 214 (232)
T ss_dssp HHH--HHHHHHH--TTCCSEEEEEECCEEECTTGGGS--HHHHHHHHHH-CSCCTTGGGGTEEEHHHHHHHHHHHHTSCC
T ss_pred HHH--Hhhhccc--cccccceEEecCceeecCCCcCc--HHHHHHHHHh-hccCCcccCCCeEEHHHHHHHHHHHHhcCc
Confidence 444 3333322 2455 599999999999865432 1211 11111 122333344557999999999999998887
Q ss_pred CCceEEeeC
Q 020476 244 YRGVINGTA 252 (325)
Q Consensus 244 ~~~~~~~~~ 252 (325)
..+++.+.+
T Consensus 215 ~~~~~i~~~ 223 (232)
T d2bkaa1 215 DKQMELLEN 223 (232)
T ss_dssp CSSEEEEEH
T ss_pred cCCeEEEcH
Confidence 777776653
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1.4e-27 Score=191.18 Aligned_cols=201 Identities=14% Similarity=0.111 Sum_probs=143.9
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|.|+||+||||||+||++++++|+++||+|++++|++++........ ..+..+|+.|.+++.++++++|+|||++|..
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~~~~--~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~ 78 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRP--AHVVVGDVLQAADVDKTVAGQDAVIVLLGTR 78 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSSCCC--SEEEESCTTSHHHHHHHHTTCSEEEECCCCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccccccc--cccccccccchhhHHHHhcCCCEEEEEeccC
Confidence 34679999999999999999999999999999999887754433221 1255689999999999999999999999854
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHH
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTA 176 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~ 176 (325)
.... . ...+..++.++++++++ .+++|+|++||.++ ++.....+ +....| ..+... +.
T Consensus 79 ~~~~--~------~~~~~~~~~~l~~aa~~--~~v~r~i~~ss~~~--~~~~~~~~-----~~~~~~~~~~~~~----e~ 137 (205)
T d1hdoa_ 79 NDLS--P------TTVMSEGARNIVAAMKA--HGVDKVVACTSAFL--LWDPTKVP-----PRLQAVTDDHIRM----HK 137 (205)
T ss_dssp TCCS--C------CCHHHHHHHHHHHHHHH--HTCCEEEEECCGGG--TSCTTCSC-----GGGHHHHHHHHHH----HH
T ss_pred Cchh--h------hhhhHHHHHHHHHHHHh--cCCCeEEEEeeeec--cCCCcccc-----ccccccchHHHHH----HH
Confidence 2211 1 13567889999999999 89999999999887 55432211 011122 222222 22
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCCCCc-eEEeeC
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPSYRG-VINGTA 252 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~-~~~~~~ 252 (325)
+.++.+++|+++||+.+++........+ ..++.....+++.+|+|++++.++++++..| .+.++.
T Consensus 138 ~l~~~~~~~tiirp~~~~~~~~~~~~~~-----------~~~~~~~~~~i~~~DvA~~~~~~l~~~~~~g~~~~~s~ 203 (205)
T d1hdoa_ 138 VLRESGLKYVAVMPPHIGDQPLTGAYTV-----------TLDGRGPSRVISKHDLGHFMLRCLTTDEYDGHSTYPSH 203 (205)
T ss_dssp HHHHTCSEEEEECCSEEECCCCCSCCEE-----------ESSSCSSCSEEEHHHHHHHHHHTTSCSTTTTCEEEEEC
T ss_pred HHHhcCCceEEEecceecCCCCcccEEE-----------eeCCCCCCCcCCHHHHHHHHHHHhCCCCCCCEEEecCC
Confidence 3344699999999999987543111010 1345556679999999999999999888544 565654
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.95 E-value=2.7e-29 Score=213.57 Aligned_cols=234 Identities=15% Similarity=0.143 Sum_probs=160.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-------CCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-------GKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
++|||||||||||||++++++|+++|++|++++|++........ ..........|+.+...+.+.+++++.|+
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi 81 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVI 81 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeee
Confidence 57899999999999999999999999999999998655322110 00001133457778888888889999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHH
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCRE 171 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~ 171 (325)
|+++. .+..++.+++++++. .+.+++++.|+.+. .. ++... ...........
T Consensus 82 ~~~~~----------------~~~~~~~~~~~a~~~--~~~~~~~~~s~~~~--~~-------~~~~~-~~~~~~~~~~~ 133 (307)
T d1qyca_ 82 STVGS----------------LQIESQVNIIKAIKE--VGTVKRFFPSEFGN--DV-------DNVHA-VEPAKSVFEVK 133 (307)
T ss_dssp ECCCG----------------GGSGGGHHHHHHHHH--HCCCSEEECSCCSS--CT-------TSCCC-CTTHHHHHHHH
T ss_pred ecccc----------------cccchhhHHHHHHHH--hccccceeeecccc--cc-------ccccc-ccccccccccc
Confidence 99874 245556678888888 67888888777543 21 11111 11111222222
Q ss_pred HHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCC---CCCCcceeeeccHHHHHHHHHHHHcCCCC-Cc-
Q 020476 172 WEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGP---LGSGQQWFSWIHLDDIVNLIYEALSNPSY-RG- 246 (325)
Q Consensus 172 ~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~v~v~D~a~a~~~~~~~~~~-~~- 246 (325)
.....+..+.+++++++||+.+||+.......+.. ....+.. ++.+++.++++|++|+|++++.+++++.. ++
T Consensus 134 ~~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~ 211 (307)
T d1qyca_ 134 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGL--TAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKT 211 (307)
T ss_dssp HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTC--SSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEE
T ss_pred ccccchhhccCCCceecccceecCCCccchhhhhh--hhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCce
Confidence 23333334468999999999999986433222111 1112222 37788999999999999999999988763 34
Q ss_pred eEEeeCCCCCCHHHHHHHHHHHhCCCCC-CCccHHHH
Q 020476 247 VINGTAPNPVRLAEMCDHLGNVLGRPSW-LPVPEFAL 282 (325)
Q Consensus 247 ~~~~~~~~~~s~~e~~~~i~~~~g~~~~-~~~~~~~~ 282 (325)
+|++++++.+|+.|+++.+.+.+|++.. ..+|.+..
T Consensus 212 ~~~~~~~~~~s~~ei~~~~~~~~G~~~~~~~~~~~~~ 248 (307)
T d1qyca_ 212 LYLRLPANTLSLNELVALWEKKIDKTLEKAYVPEEEV 248 (307)
T ss_dssp EECCCGGGEEEHHHHHHHHHHHTTSCCEEEEECHHHH
T ss_pred eEEeCCCCccCHHHHHHHHHHHHCCCCcEEECCHHHH
Confidence 5667778899999999999999998743 34454433
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=3e-27 Score=194.67 Aligned_cols=230 Identities=17% Similarity=0.127 Sum_probs=158.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCe--EEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQ--VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~--V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.|++|||||||||||+++++.|+++|++ |++++|++++......... +..+|+.+.+.+.++++++|+|||+|+.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~~~~~---~~~~d~~~~~~~~~~~~~~d~vi~~a~~ 78 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEAD---VFIGDITDADSINPAFQGIDALVILTSA 78 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTTCCTT---EEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhccCCcE---EEEeeeccccccccccccceeeEEEEee
Confidence 4789999999999999999999999975 6777887766544443322 5568888999999999999999999986
Q ss_pred CCCCC------------CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 97 PIGTR------------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 97 ~~~~~------------~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
..... ...........+|+.++++++..+.. ...+...+.|+... +.... +....+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~s~~~~--~~~~~--------~~~~~~ 146 (252)
T d2q46a1 79 VPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKV--AGVKHIVVVGSMGG--TNPDH--------PLNKLG 146 (252)
T ss_dssp CCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHH--HTCSEEEEEEETTT--TCTTC--------GGGGGG
T ss_pred ccccccccchhhhhhcccccccchhhhccccccceeecccccc--cccccccccccccc--CCCCc--------cccccc
Confidence 42110 01112344567899999999999988 67778888877654 22111 111111
Q ss_pred -HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC
Q 020476 165 -LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
..+...+.....+....+++++++||+++||+.......+. +..........+++|++|+|++++.+++++.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~~~~~-------~~~~~~~~~~~~~i~~~Dva~a~~~~l~~~~ 219 (252)
T d2q46a1 147 NGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVRELLV-------GKDDELLQTDTKTVPRADVAEVCIQALLFEE 219 (252)
T ss_dssp GCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSSCEEE-------ESTTGGGGSSCCEEEHHHHHHHHHHHTTCGG
T ss_pred ccchhhhhhhhhhhhhcccccceeecceEEECCCcchhhhhh-------ccCcccccCCCCeEEHHHHHHHHHHHhCCcc
Confidence 11222333344445557999999999999999754332211 1111112334579999999999999999887
Q ss_pred CC-ceEEeeCCC---CCCHHHHHHHHHHHhC
Q 020476 244 YR-GVINGTAPN---PVRLAEMCDHLGNVLG 270 (325)
Q Consensus 244 ~~-~~~~~~~~~---~~s~~e~~~~i~~~~g 270 (325)
.. ++||++++. ..++.|+.+++.+..+
T Consensus 220 ~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~ 250 (252)
T d2q46a1 220 AKNKAFDLGSKPEGTSTPTKDFKALFSQVTS 250 (252)
T ss_dssp GTTEEEEEEECCTTTSCCCCCHHHHHTTCCC
T ss_pred ccCcEEEEeeCCCCCChhHHHHHHHHHHHHh
Confidence 44 499998743 4678888887776654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.92 E-value=2.4e-24 Score=173.22 Aligned_cols=194 Identities=16% Similarity=0.138 Sum_probs=130.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-CCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-~~~d~vi~~a~~ 96 (325)
++||||||||||||++|+++|+++|+ +|++++|++...... ...+..|..++.+.+ ..+|+||||+|.
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~---------~~~~~~d~~~~~~~~~~~~d~vi~~~g~ 72 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPR---------LDNPVGPLAELLPQLDGSIDTAFCCLGT 72 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTT---------EECCBSCHHHHGGGCCSCCSEEEECCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhccc---------ccccccchhhhhhccccchheeeeeeee
Confidence 57999999999999999999999997 677777765432111 112233434444433 468999999985
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGT 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~ 175 (325)
.. ........+.+.|+.++.+++++|++ .++++++++||.++ ++.. ...| .+|...|. .
T Consensus 73 ~~---~~~~~~~~~~~~~~~~~~~~~~~a~~--~~v~~~i~~Ss~~~--~~~~-----------~~~y~~~K~~~E~--~ 132 (212)
T d2a35a1 73 TI---KEAGSEEAFRAVDFDLPLAVGKRALE--MGARHYLVVSALGA--DAKS-----------SIFYNRVKGELEQ--A 132 (212)
T ss_dssp CH---HHHSSHHHHHHHHTHHHHHHHHHHHH--TTCCEEEEECCTTC--CTTC-----------SSHHHHHHHHHHH--H
T ss_pred ec---cccccccccccchhhhhhhccccccc--cccccccccccccc--cccc-----------ccchhHHHHHHhh--h
Confidence 41 12334567889999999999999999 89999999999887 5421 2345 44544433 2
Q ss_pred HHhhcCCc-eEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-CCCcceeeeccHHHHHHHHHHHHcCCCCCceEEee
Q 020476 176 ALKVNKDV-RLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-GSGQQWFSWIHLDDIVNLIYEALSNPSYRGVINGT 251 (325)
Q Consensus 176 ~~~~~~~~-~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~v~D~a~a~~~~~~~~~~~~~~~~~ 251 (325)
. .+.+. +++|+||+.|||+..... +.. ....++ ......+.++|++|+|++++.+++++. .|++++.
T Consensus 133 l--~~~~~~~~~I~Rp~~v~G~~~~~~--~~~----~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~-~g~~~~~ 201 (212)
T d2a35a1 133 L--QEQGWPQLTIARPSLLFGPREEFR--LAE----ILAAPIARILPGKYHGIEACDLARALWRLALEEG-KGVRFVE 201 (212)
T ss_dssp H--TTSCCSEEEEEECCSEESTTSCEE--GGG----GTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC-SEEEEEE
T ss_pred c--cccccccceeeCCcceeCCccccc--HHH----HHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC-CCCEEEE
Confidence 2 22355 699999999999975432 110 111121 111123567999999999999998875 5655544
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.89 E-value=1.2e-22 Score=175.72 Aligned_cols=226 Identities=13% Similarity=0.101 Sum_probs=150.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC-CCCCccccCceeecCCc-hhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF-PGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~~~d~~d~~-~~~~~~~~~d~vi~~a~~ 96 (325)
.+|+|+|||||||||++|+++|+++||+|++++|++++..... ..........+|+.|.. .+..++.++|+++++...
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~~~ 81 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS 81 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhhcccCCCEEEEeeCCCcHHHHHHHhcCCceEEeeccc
Confidence 3579999999999999999999999999999999876643211 11001113456777755 466788899999988642
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCchHHHHHHHHHHHH
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDYLAEVCREWEGTA 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y~~k~~~~~~~~~ 176 (325)
.. ..++..+.++++++++ .+++++++.||... ..... ..+..+.+..|... ..
T Consensus 82 ~~-------------~~~~~~~~~~~~aa~~--agv~~~v~~Ss~~~--~~~~~------~~~~~~~~~~k~~~----~~ 134 (350)
T d1xgka_ 82 QA-------------GDEIAIGKDLADAAKR--AGTIQHYIYSSMPD--HSLYG------PWPAVPMWAPKFTV----EN 134 (350)
T ss_dssp TT-------------SCHHHHHHHHHHHHHH--HSCCSEEEEEECCC--GGGTS------SCCCCTTTHHHHHH----HH
T ss_pred cc-------------chhhhhhhHHHHHHHH--hCCCceEEEeeccc--cccCC------cccchhhhhhHHHH----HH
Confidence 10 1356677899999998 78889999988754 22111 11112222444322 22
Q ss_pred HhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCC----CCCCCcceeeeccH-HHHHHHHHHHHcCCC---CCceE
Q 020476 177 LKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGG----PLGSGQQWFSWIHL-DDIVNLIYEALSNPS---YRGVI 248 (325)
Q Consensus 177 ~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~v~v-~D~a~a~~~~~~~~~---~~~~~ 248 (325)
+....+++++++||+.+++.................+. ...+++..++++++ +|+++++..++.++. .+..|
T Consensus 135 ~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G~~~ 214 (350)
T d1xgka_ 135 YVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNGHRI 214 (350)
T ss_dssp HHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTTCEE
T ss_pred HHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCCeEE
Confidence 33446899999999998875321111110000011111 12456677888876 799999999997643 34478
Q ss_pred EeeCCCCCCHHHHHHHHHHHhCCC
Q 020476 249 NGTAPNPVRLAEMCDHLGNVLGRP 272 (325)
Q Consensus 249 ~~~~~~~~s~~e~~~~i~~~~g~~ 272 (325)
+++++ .+|+.|+++.+.+.+|++
T Consensus 215 ~~~g~-~~T~~eia~~l~~~~G~~ 237 (350)
T d1xgka_ 215 ALTFE-TLSPVQVCAAFSRALNRR 237 (350)
T ss_dssp EECSE-EECHHHHHHHHHHHHTSC
T ss_pred EEeCC-cCCHHHHHHHHHHHHCCc
Confidence 88764 699999999999999987
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.79 E-value=1.3e-18 Score=140.96 Aligned_cols=210 Identities=17% Similarity=0.146 Sum_probs=144.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.+.+++|||||++.||+++++.|++.|++|++.+|+.+...... ...+|+.|+++++++++ ++|++
T Consensus 5 l~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-------~~~~Dv~~~~~v~~~~~~~~~~~g~iDiL 77 (237)
T d1uzma1 5 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-------GVEVDVTDSDAVDRAFTAVEEHQGPVEVL 77 (237)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-------EEECCTTCHHHHHHHHHHHHHHHSSCSEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-------EEEEecCCHHHHHHHHHHHHHhcCCceEE
Confidence 35679999999999999999999999999999999876544321 44689999988776653 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .+.+.+.++..+++|+.++..+.+ .+++ .+.+++|++||.... .+ .+....
T Consensus 78 VnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~--~~~g~Iv~isS~~~~-~~----------~~~~~~ 144 (237)
T d1uzma1 78 VSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQR--NKFGRMIFIGSVSGL-WG----------IGNQAN 144 (237)
T ss_dssp EEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCCCC----------------CCHH
T ss_pred EeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccc--cCCCceEEEcchhhc-cC----------CcccHH
Confidence 999997543 445677889999999998766544 4555 566799999998761 22 122445
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.....+..+ .|+++..+.||.+..+.......... -......|++ -+...+|+|+++..++
T Consensus 145 Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedvA~~v~fL~ 217 (237)
T d1uzma1 145 YAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQ-QGALQFIPAK------RVGTPAEVAGVVSFLA 217 (237)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHH-HHHGGGCTTC------SCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHH-HHHHhcCCCC------CCcCHHHHHHHHHHHh
Confidence 7 6777666555554443 48999999999987542111100000 0112222222 2678999999999998
Q ss_pred cCCC--CCc-eEEeeCCC
Q 020476 240 SNPS--YRG-VINGTAPN 254 (325)
Q Consensus 240 ~~~~--~~~-~~~~~~~~ 254 (325)
.+.. ..| ++.+.+|-
T Consensus 218 S~~s~~itG~~i~vdGG~ 235 (237)
T d1uzma1 218 SEDASYISGAVIPVDGGM 235 (237)
T ss_dssp SGGGTTCCSCEEEESTTT
T ss_pred CchhcCCcCCeEEECCCC
Confidence 6543 344 78787763
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.78 E-value=9.2e-19 Score=142.68 Aligned_cols=219 Identities=18% Similarity=0.148 Sum_probs=149.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
..+++|||||++.||+++++.|+++|++|++.+|+.++...............+|+.|.+.++++++ ++|++||+||
T Consensus 6 ~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnAg 85 (244)
T d1pr9a_ 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA 85 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEeccc
Confidence 4579999999999999999999999999999999876644332221112245689999999888775 6899999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhc-C--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
.... .+.+.+.++..+++|+.++..+.+++.. + ..+..++|++||... ... .+....| .+|.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~---------~~~~~~Y~asKa 154 (244)
T d1pr9a_ 86 VALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCS--QRA---------VTNHSVYCSTKG 154 (244)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred cccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccc--ccc---------ccchhhhhhhHH
Confidence 8644 3456788899999999987776665432 1 134578999999865 221 1223457 6676
Q ss_pred HHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC-
Q 020476 169 CREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS- 243 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~- 243 (325)
..+.....+..+ .++++..+.||.+..+... ...............|++ -+...+|+|+++..++.+..
T Consensus 155 al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peevA~~v~fL~S~~a~ 228 (244)
T d1pr9a_ 155 ALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLG------KFAEVEHVVNAILFLLSDRSG 228 (244)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTC------SCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhCchhC
Confidence 666555555443 4899999999998765211 111111111222223332 26789999999999986533
Q ss_pred -CCc-eEEeeCCC
Q 020476 244 -YRG-VINGTAPN 254 (325)
Q Consensus 244 -~~~-~~~~~~~~ 254 (325)
..| ++.+.+|.
T Consensus 229 ~itG~~i~vDGG~ 241 (244)
T d1pr9a_ 229 MTTGSTLPVEGGF 241 (244)
T ss_dssp TCCSCEEEESTTG
T ss_pred CcCCcEEEECccH
Confidence 344 77777764
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.77 E-value=6.6e-18 Score=137.28 Aligned_cols=219 Identities=14% Similarity=0.088 Sum_probs=148.1
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
....++++||||++.||+++++.|++.|++|++.+|+.++.+....... .....+|+.|+++++++++ ++|+
T Consensus 2 ~L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~-~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi 80 (242)
T d1ulsa_ 2 RLKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG-AHPVVMDVADPASVERGFAEALAHLGRLDG 80 (242)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT-CEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC-CeEEEEecCCHHHHHHHHHHHHHhcCCceE
Confidence 3445789999999999999999999999999999998766444332211 1245689999998876653 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-C-CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-P-EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
+|||||.... .+.+.+.++..+++|+.++..+.+++... . .+...++++||... .+ .+....|
T Consensus 81 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~--~~----------~~~~~~Y 148 (242)
T d1ulsa_ 81 VVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVY--LG----------NLGQANY 148 (242)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGG--GC----------CTTCHHH
T ss_pred EEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccc--cC----------CCCCcch
Confidence 9999997533 34567788999999999987777655432 1 34455666665432 22 1234467
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
.+|.........+..+ .|+++..+.||.+-.+.......... -......|++ -+...+|+|+++..++.
T Consensus 149 ~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~-~~~~~~~pl~------R~~~pedia~~v~fL~S 221 (242)
T d1ulsa_ 149 AASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVR-EKAIAATPLG------RAGKPLEVAYAALFLLS 221 (242)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHH-HHHHHTCTTC------SCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHH-HHHHhcCCCC------CCCCHHHHHHHHHHHhc
Confidence 6776666555554443 48999999999998764322211111 1222333332 26688999999999996
Q ss_pred CCC--CCc-eEEeeCCCC
Q 020476 241 NPS--YRG-VINGTAPNP 255 (325)
Q Consensus 241 ~~~--~~~-~~~~~~~~~ 255 (325)
+.. ..| ++.+.+|..
T Consensus 222 ~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 222 DESSFITGQVLFVDGGRT 239 (242)
T ss_dssp GGGTTCCSCEEEESTTTT
T ss_pred hhhCCCCCcEEEECCCcc
Confidence 533 344 888877754
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.77 E-value=1.2e-18 Score=141.82 Aligned_cols=217 Identities=21% Similarity=0.135 Sum_probs=147.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC---CCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ---GSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~---~~d~vi~~a~ 95 (325)
..|++|||||++.||+++++.|+++|++|++.+|+.++...............+|+.|.+.++++++ ++|++|||||
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg 83 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA 83 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence 4579999999999999999999999999999999876543332221112245689999999988876 6899999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEV 168 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~ 168 (325)
.... ...+.+.++..+++|+.++..+.+++... .....++|++||... +.. .+....| .+|.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~--~~~---------~~~~~~Y~asKa 152 (242)
T d1cyda_ 84 LVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVA--HVT---------FPNLITYSSTKG 152 (242)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSC---------CTTBHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhc--ccc---------CCccccccchHH
Confidence 7543 44567788899999999988877654321 034468999998765 221 1223457 6676
Q ss_pred HHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 169 CREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 169 ~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
....+...+..+ +|+++..+.||.+..+.... ...... ......|++ -+...+|+|+++..++.+.
T Consensus 153 al~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~--~~~~~~pl~------R~~~peeva~~v~fL~S~~ 224 (242)
T d1cyda_ 153 AMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFAR--KLKERHPLR------KFAEVEDVVNSILFLLSDR 224 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHH--HHHHHSTTS------SCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHH--HHHhcCCCC------CCcCHHHHHHHHHHHhCch
Confidence 666555555443 48999999999886542100 011111 111222322 2678999999999998653
Q ss_pred C--CCc-eEEeeCCC
Q 020476 243 S--YRG-VINGTAPN 254 (325)
Q Consensus 243 ~--~~~-~~~~~~~~ 254 (325)
. ..| ++.+.+|.
T Consensus 225 s~~itG~~i~vDGG~ 239 (242)
T d1cyda_ 225 SASTSGGGILVDAGY 239 (242)
T ss_dssp GTTCCSSEEEESTTG
T ss_pred hcCcCCceEEeCcch
Confidence 3 344 78787764
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.76 E-value=2.3e-18 Score=140.57 Aligned_cols=221 Identities=16% Similarity=0.088 Sum_probs=148.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
..|+++||||++.||+++++.|+++|++|++.+|+++..+.............+|+.|+++++++++ ++|++|
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 3578999999999999999999999999999999876654433222222355689999988877654 689999
Q ss_pred ECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|+||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|++||.... .+ .+....| .
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~-~~----------~~~~~~Y~a 153 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGA-IG----------QAQAVPYVA 153 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHH-HC----------CTTCHHHHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCccccccccc-cc----------ccCcchhHH
Confidence 99996422 24466778999999999977776654322 1123689999998762 11 1234467 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC----CcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG----GALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~----~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
+|.........+..+ .++++..+.||.|..+.. .........+ ......|++ -+...+|+|++++.
T Consensus 154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~p~eva~~v~f 227 (250)
T d1ydea1 154 TKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLG------RMGQPAEVGAAAVF 227 (250)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTS------SCBCHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCC------CCCCHHHHHHHHHH
Confidence 776666555554443 489999999999864410 0000011111 222223332 26789999999999
Q ss_pred HHcCCC-CCc-eEEeeCCCCC
Q 020476 238 ALSNPS-YRG-VINGTAPNPV 256 (325)
Q Consensus 238 ~~~~~~-~~~-~~~~~~~~~~ 256 (325)
++.+.. ..| ++.+.+|..+
T Consensus 228 L~Sda~~itG~~i~vDGG~~l 248 (250)
T d1ydea1 228 LASEANFCTGIELLVTGGAEL 248 (250)
T ss_dssp HHHHCTTCCSCEEEESTTTTS
T ss_pred HhCccCCCcCCeEEECCCccc
Confidence 886432 344 8888877544
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=4.4e-18 Score=138.78 Aligned_cols=217 Identities=13% Similarity=0.040 Sum_probs=145.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~ 92 (325)
.+++|||||++.||+++++.|+++|++|++.+|+++..+...... .....+|+.|.++++++++ ++|++||
T Consensus 5 GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~--~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLVn 82 (248)
T d2d1ya1 5 GKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAEAIG--GAFFQVDLEDERERVRFVEEAAYALGRVDVLVN 82 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHHHHT--CEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcC--CeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 478999999999999999999999999999999876532211100 1144689999887776653 6899999
Q ss_pred CCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 93 LAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 93 ~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
|||.... .+.+.++++..+++|+.++..+.+++... ..+..++|++||... +.. .+....| .+
T Consensus 83 nAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~--~~~---------~~~~~~Y~as 151 (248)
T d2d1ya1 83 NAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQG--LFA---------EQENAAYNAS 151 (248)
T ss_dssp CCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSB---------CTTBHHHHHH
T ss_pred eCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccc--ccc---------ccccchhHHH
Confidence 9997544 44467788899999999987776655322 145678999999876 211 1223457 67
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-------cccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-------ALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
|.....+...+..+ .|+++..+.||.+-.+... ....... ......|+ .-+...+|+|+++.
T Consensus 152 Kaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~--~~~~~~pl------~R~~~pedia~~v~ 223 (248)
T d2d1ya1 152 KGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRR--DWEDLHAL------RRLGKPEEVAEAVL 223 (248)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CH--HHHTTSTT------SSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHH--HHHhcCCC------CCCcCHHHHHHHHH
Confidence 76666555544443 4899999999988654100 0000000 01111122 23678999999999
Q ss_pred HHHcCCC--CCc-eEEeeCCCCCC
Q 020476 237 EALSNPS--YRG-VINGTAPNPVR 257 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~~~s 257 (325)
.++.+.. ..| ++.+.+|-+.|
T Consensus 224 fL~S~~s~~itG~~i~vDGG~tas 247 (248)
T d2d1ya1 224 FLASEKASFITGAILPVDGGMTAS 247 (248)
T ss_dssp HHHSGGGTTCCSCEEEESTTGGGB
T ss_pred HHhCchhcCCCCcEEEcCcCcccc
Confidence 9986433 344 88888875443
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.75 E-value=6.2e-18 Score=137.38 Aligned_cols=211 Identities=13% Similarity=0.109 Sum_probs=146.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||++.||+++++.|+++|++|++.+|++++.+...... .......+|+.|+++++++++ .+|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence 3578999999999999999999999999999999876544332211 112245689999988876653 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
|||||.... .+.+.+.++..+++|+.++..+.+++ ++ .+..++|++||... +.. .+....
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~--~~~G~Ii~isS~~~--~~~---------~~~~~~ 151 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKE--AGRGSIINISSIEG--LAG---------TVACHG 151 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTBHH
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHh--cCcceEEecccccc--ccc---------cccccc
Confidence 999998643 34457788999999999977776644 33 45578999999875 221 122345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEAL 239 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~ 239 (325)
| .+|...+.+...+..+ .|+++..+.||.+..+....... .....|+ .-+...+|+|+++..++
T Consensus 152 Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~------~~~~~pl------~R~~~p~diA~~v~fL~ 219 (244)
T d1nffa_ 152 YTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPE------DIFQTAL------GRAAEPVEVSNLVVYLA 219 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCT------TCSCCSS------SSCBCHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhH------HHHhccc------cCCCCHHHHHHHHHHHh
Confidence 7 6777666655555543 48999999999887653111100 0011111 23678999999999998
Q ss_pred cCCC--CCc-eEEeeCCC
Q 020476 240 SNPS--YRG-VINGTAPN 254 (325)
Q Consensus 240 ~~~~--~~~-~~~~~~~~ 254 (325)
.... ..| ++.+.+|.
T Consensus 220 s~~s~~itG~~i~vDGG~ 237 (244)
T d1nffa_ 220 SDESSYSTGAEFVVDGGT 237 (244)
T ss_dssp SGGGTTCCSCEEEESTTG
T ss_pred ChhhCCCcCCEEEECCCe
Confidence 6432 344 78887775
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.75 E-value=4.5e-18 Score=138.39 Aligned_cols=216 Identities=14% Similarity=0.073 Sum_probs=147.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||++.||+++++.|+++|++|++.+|+++..+...... .......+|+.|+++++++++ ++|++|
T Consensus 4 gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 83 (243)
T d1q7ba_ 4 GKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDILV 83 (243)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCcceeh
Confidence 478999999999999999999999999999999876544332211 111234689999888776654 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|+||.... .+...+.++..+++|+.++..+.+++.... .+..++|++||... +... +....| .
T Consensus 84 nnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~~---------~~~~~Y~a 152 (243)
T d1q7ba_ 84 NNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG--TMGN---------GGQANYAA 152 (243)
T ss_dssp ECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HHCC---------TTCHHHHH
T ss_pred hhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh--cCCC---------CCCHHHHH
Confidence 99987643 344677888999999999777766553210 45578999999876 2111 224467 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+.+...+..+ .|+++..+.||.+-.+.. ..+.+.. ......|++ -+...+|+|.++..++.
T Consensus 153 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~---~~~~~~~~~~~~~~~pl~------R~~~pedvA~~v~fL~S 223 (243)
T d1q7ba_ 153 AKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMT---RALSDDQRAGILAQVPAG------RLGGAQEIANAVAFLAS 223 (243)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHH---HTSCHHHHHHHHTTCTTS------SCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhCccCeEEEEEecceEechhh---hhhhhhHHHHHHhcCCCC------CCCCHHHHHHHHHHHhC
Confidence 777666655555443 489999999998865421 1111111 222222332 26789999999999996
Q ss_pred CCC---CCceEEeeCCCC
Q 020476 241 NPS---YRGVINGTAPNP 255 (325)
Q Consensus 241 ~~~---~~~~~~~~~~~~ 255 (325)
+.. .+.++++.+|-.
T Consensus 224 ~~s~~itGq~i~vdGG~~ 241 (243)
T d1q7ba_ 224 DEAAYITGETLHVNGGMY 241 (243)
T ss_dssp GGGTTCCSCEEEESTTSS
T ss_pred chhcCCcCCeEEECCCeE
Confidence 533 344888877743
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.74 E-value=3.5e-18 Score=140.27 Aligned_cols=220 Identities=12% Similarity=0.040 Sum_probs=148.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
...++++||||++.||+++++.|+++|++|++.+|+.++.+..... ........+|+.|++++.++++ ++|+
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDi 82 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDI 82 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccE
Confidence 3457899999999999999999999999999999987654332211 1111244689999998887664 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhc-C--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINE-S--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~-~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+||+||.... .+.+.+.++..+++|+.++..+.+++.. + .....++|++||... +-. .+....
T Consensus 83 lVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~--~~~---------~~~~~~ 151 (256)
T d1k2wa_ 83 LVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAG--RRG---------EALVGV 151 (256)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTCHH
T ss_pred EEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhh--ccc---------cccccc
Confidence 9999997533 4446778899999999998777765322 1 033468999999865 211 122345
Q ss_pred h-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH-------------HHHcCCCCCCCcceeeec
Q 020476 164 Y-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-------------MMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~v 226 (325)
| .+|...+.....+.. ..|+++..+.||.+-.+... .+.... ......|+ .-+.
T Consensus 152 Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~Pl------gR~~ 222 (256)
T d1k2wa_ 152 YCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWD---GVDAKFADYENLPRGEKKRQVGAAVPF------GRMG 222 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHH---HHHHHHHHHHTCCTTHHHHHHHHHSTT------SSCB
T ss_pred hhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhh---hhhhhhhhhccCChHHHHHHHHhcCCC------CCCc
Confidence 7 667666655554444 34899999999988776311 111111 11111122 2267
Q ss_pred cHHHHHHHHHHHHcCCC---CCceEEeeCCCCCC
Q 020476 227 HLDDIVNLIYEALSNPS---YRGVINGTAPNPVR 257 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~---~~~~~~~~~~~~~s 257 (325)
..+|+|.+++.++.... .+.++.+.+|..+|
T Consensus 223 ~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ms 256 (256)
T d1k2wa_ 223 RAEDLTGMAIFLATPEADYIVAQTYNVDGGNWMS 256 (256)
T ss_dssp CHHHHHHHHHHTTSGGGTTCCSCEEEESTTSSCC
T ss_pred CHHHHHHHHHHHhCchhCCccCceEEECcchhhC
Confidence 89999999999886433 34488888887654
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.74 E-value=8.6e-18 Score=137.70 Aligned_cols=221 Identities=15% Similarity=0.098 Sum_probs=149.0
Q ss_pred HhhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-----
Q 020476 15 LLQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 15 ~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.|....++++||||++.||+++++.|++.|++|++.+|++++..... ..........+|+.|++++.++++
T Consensus 6 ~m~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~ 85 (255)
T d1fmca_ 6 NLRLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISK 85 (255)
T ss_dssp GGCCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 35455689999999999999999999999999999999876543221 111112245689999988776653
Q ss_pred --CCCEEEECCCCCCC--CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 --GSTAVVNLAGTPIG--TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 --~~d~vi~~a~~~~~--~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|++|||||.... .+.+.++++..+++|+.++..+.+++... ..+..++|++||... +.. .+
T Consensus 86 ~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~--~~~---------~~ 154 (255)
T d1fmca_ 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAA--ENK---------NI 154 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TCC---------CT
T ss_pred cCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccch--hcc---------cc
Confidence 68999999997643 34467788999999999877766544321 044567899998765 221 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC--CcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG--GALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
....| .+|.........+..+ .|+++..|.||.|..+.. ........ ......|++ -+...+|+|+
T Consensus 155 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~--~~~~~~pl~------R~g~pedvA~ 226 (255)
T d1fmca_ 155 NMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQ--KMLQHTPIR------RLGQPQDIAN 226 (255)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHH--HHHHTCSSC------SCBCHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHH--HHHhcCCCC------CCcCHHHHHH
Confidence 34467 6777666555555443 589999999999875421 11111111 222333332 2677899999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
++..++.... ..| ++.+.+|.
T Consensus 227 ~v~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 227 AALFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHhCchhcCCcCCEEEECcCc
Confidence 9999986533 344 88888875
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.74 E-value=1.4e-17 Score=136.03 Aligned_cols=220 Identities=16% Similarity=0.064 Sum_probs=146.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||++.||+++++.|+++|++|++.+|+.++....... ........+|+.|++++.++++ +
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 357899999999999999999999999999999987653321110 1111234689999988776653 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|+++|......+ .+..
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~----------~~~~ 153 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVT----------MPNI 153 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCC----------SSSC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhcccc----------Cccc
Confidence 8999999997533 34467788999999999977776654322 1556799999986541111 1123
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
..| .+|...+.....+..+ .|+++..+.||.+-.+.......--... ......|++ -+...+|+|++++
T Consensus 154 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~v~ 227 (251)
T d1vl8a_ 154 SAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLG------RTGVPEDLKGVAV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTS------SCBCGGGGHHHHH
T ss_pred cchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCC------CCCCHHHHHHHHH
Confidence 457 6676666555555443 4899999999999766421110000111 222333432 2567899999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.... ..| ++.+.+|.
T Consensus 228 fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 228 FLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCchhCCCcCcEEEeCcCe
Confidence 9886533 344 78777764
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.74 E-value=2.7e-17 Score=134.13 Aligned_cols=218 Identities=13% Similarity=0.044 Sum_probs=141.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc--cCCCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL--IFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
..+.++||||++.||+++++.|+++|++|++.+|++.+... ............+|+.|++++.++++ ++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 35789999999999999999999999999999998754211 11111112245689999998877653 6999
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||||.... .+.+.+.++..+++|+.++..+.+++ ++ .+..++|++||... ... .+...
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~--~~~G~Iv~isS~~~--~~~---------~~~~~ 150 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKR--NGWGRIINLTSTTY--WLK---------IEAYT 150 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--GSC---------CSSCH
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHh--cCCCCccccccchh--ccc---------Ccccc
Confidence 9999998643 34567789999999999977766654 44 45578999999865 211 12344
Q ss_pred ch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
.| .+|.....+...+.. ..|+++..+.||.+..+....... -........ ......-+...+|+|.+++.+
T Consensus 151 ~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~-~~~~~~~~~----~~~~l~r~~~pedvA~~v~fL 225 (247)
T d2ew8a1 151 HYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASAL-SAMFDVLPN----MLQAIPRLQVPLDLTGAAAFL 225 (247)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC-------------------C----TTSSSCSCCCTHHHHHHHHHH
T ss_pred cchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCcccccccc-chhHHHHHH----HhccCCCCCCHHHHHHHHHHH
Confidence 67 677666655555444 348999999999987653211000 000000000 000111256789999999999
Q ss_pred HcCCC--CCc-eEEeeCCC
Q 020476 239 LSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 239 ~~~~~--~~~-~~~~~~~~ 254 (325)
+.... ..| ++.+.+|.
T Consensus 226 ~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 226 ASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp TSGGGTTCCSCEEEESSSC
T ss_pred hCchhcCCcCCeEEECCCE
Confidence 86433 344 78887774
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.73 E-value=2.4e-17 Score=135.41 Aligned_cols=219 Identities=13% Similarity=0.029 Sum_probs=144.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-cccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||++.||+++++.|+++|++|++.+|+.+. .+.. ...........+|+.|++++.++++ +
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 45789999999999999999999999999999998643 2111 1111112245689999988877664 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCC-CEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVR-PSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~-~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++ .+ .+.+ .+|++||... .. ..
T Consensus 86 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~--~~~g~~Iv~isS~~~--~~---------~~ 152 (261)
T d1geea_ 86 LDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVE--NDIKGTVINMSSVHE--KI---------PW 152 (261)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCCCEEEEECCGGG--TS---------CC
T ss_pred CCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhcc--ccccccccccccchh--cc---------cC
Confidence 8999999997543 44567788999999999877765543 33 3333 4778888765 21 11
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
+....| .+|.........+..+ .|+++..|.||.+..+.......--... ......|++ -+...+|+|+
T Consensus 153 ~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~ 226 (261)
T d1geea_ 153 PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMG------YIGEPEEIAA 226 (261)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTS------SCBCHHHHHH
T ss_pred ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCC------CCCCHHHHHH
Confidence 224457 6776666555544443 4899999999998755311000000011 122222332 2678899999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCC
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPV 256 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~ 256 (325)
+++.++.... .+.++.+.+|..+
T Consensus 227 ~v~fL~S~~s~~itG~~i~vDGG~sl 252 (261)
T d1geea_ 227 VAAWLASSEASYVTGITLFADGGMTL 252 (261)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHhCchhcCCcCCeEEECCCeeC
Confidence 9999986533 3448888887543
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.73 E-value=2.7e-17 Score=134.47 Aligned_cols=219 Identities=15% Similarity=0.091 Sum_probs=143.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..++++||||++.||+++++.|+++|++|++.+|+.+..+... ..........+|+.|++++.++++ ++|
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 84 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCce
Confidence 3579999999999999999999999999999999875533221 111112245689999988776654 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCC-CCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGV-RPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~-~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+. .++|++||... +- ..+...
T Consensus 85 iLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~--~~---------~~~~~~ 153 (251)
T d1zk4a1 85 TLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEG--FV---------GDPSLG 153 (251)
T ss_dssp EEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGG--TS---------CCTTCH
T ss_pred EEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccce--ec---------cCCCch
Confidence 99999998643 44567788899999999987777664321 0333 37899998765 21 112344
Q ss_pred ch-HHHHHHHHHHHHHh-----hcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~-----~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|.....+...+. ...|+++..|.||.+..+.......--.........|+ .-+...+|+|++++
T Consensus 154 ~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl------~R~~~pedvA~~v~ 227 (251)
T d1zk4a1 154 AYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPM------GHIGEPNDIAYICV 227 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTT------SSCBCHHHHHHHHH
T ss_pred hHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCC------CCCcCHHHHHHHHH
Confidence 67 67766555444332 24589999999999875421000000000111111122 22678999999999
Q ss_pred HHHcCCC--CCc-eEEeeCCC
Q 020476 237 EALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 237 ~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++.+.. ..| ++.+.+|.
T Consensus 228 fL~S~~s~~itG~~i~vDGG~ 248 (251)
T d1zk4a1 228 YLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCchhCCCcCcEEEECccc
Confidence 9986533 344 78777763
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.73 E-value=3.1e-17 Score=134.02 Aligned_cols=218 Identities=14% Similarity=0.067 Sum_probs=145.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~vi 91 (325)
.++++||||++.||.++++.|+++|++|++.+|+.++........ .......+|+.|+++++++++ ++|++|
T Consensus 5 gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilV 84 (254)
T d1hdca_ 5 GKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGLV 84 (254)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEEE
Confidence 478999999999999999999999999999999876644332221 122345789999988877653 689999
Q ss_pred ECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 92 NLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 92 ~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
||||.... .+...+.++..+++|+.++..+.+++... ..+..++|++||... +.. .+....| .
T Consensus 85 nnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~--~~~---------~~~~~~Y~a 153 (254)
T d1hdca_ 85 NNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAG--LMG---------LALTSSYGA 153 (254)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CTTCHHHHH
T ss_pred ecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchh--ccc---------ccchhhHHH
Confidence 99998644 34566788899999999987776655321 045679999999875 221 1224467 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeee-ccHHHHHHHHHHHHcC
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW-IHLDDIVNLIYEALSN 241 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~D~a~a~~~~~~~ 241 (325)
+|.....+...+..+ .++++..+.||.+..+. ...................-+ +..+|+|.+++.++.+
T Consensus 154 sKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~-------~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~ 226 (254)
T d1hdca_ 154 SKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPM-------TAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSD 226 (254)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHH-------HHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCcc-------chhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhch
Confidence 777666665555543 48999999999886431 111100000001000001112 3579999999999865
Q ss_pred CC---CCceEEeeCCCC
Q 020476 242 PS---YRGVINGTAPNP 255 (325)
Q Consensus 242 ~~---~~~~~~~~~~~~ 255 (325)
.. .+.++.+.+|.+
T Consensus 227 ~a~~itG~~i~vDGG~t 243 (254)
T d1hdca_ 227 TSSYVTGAELAVDGGWT 243 (254)
T ss_dssp GGTTCCSCEEEESTTTT
T ss_pred hhCCCCCceEEeCCCcc
Confidence 33 344888888753
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.73 E-value=4.7e-17 Score=131.70 Aligned_cols=211 Identities=14% Similarity=0.042 Sum_probs=139.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhhCCCCEEEECCCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCIQGSTAVVNLAGTPI 98 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~~~~d~vi~~a~~~~ 98 (325)
.|++|||||++.||+++++.|+++|++|++.+|+++..+..... +..+|+.+. +.+.+.+.++|++||+||...
T Consensus 4 gK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~~~~~-----~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~~ 78 (234)
T d1o5ia_ 4 DKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHR-----YVVCDLRKDLDLLFEKVKEVDILVLNAGGPK 78 (234)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHTCSE-----EEECCTTTCHHHHHHHSCCCSEEEECCCCCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHhcCCc-----EEEcchHHHHHHHHHHhCCCcEEEecccccC
Confidence 47899999999999999999999999999999987654433221 334676542 344455568999999999753
Q ss_pred C---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHH
Q 020476 99 G---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCR 170 (325)
Q Consensus 99 ~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~ 170 (325)
. .+.+.+.++..+++|+.++..+.+++ ++ .+..++|+++|... ... .+....| .+|...
T Consensus 79 ~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~--~~~G~ii~i~S~~~--~~~---------~~~~~~Y~asKaal 145 (234)
T d1o5ia_ 79 AGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKE--KGWGRIVAITSFSV--ISP---------IENLYTSNSARMAL 145 (234)
T ss_dssp CBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGG--TSC---------CTTBHHHHHHHHHH
T ss_pred CcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccc--cccccccccccccc--ccc---------ccccccchhHHHHH
Confidence 3 34567778889999998876665544 44 45568999998765 221 1123345 566655
Q ss_pred HHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC---C
Q 020476 171 EWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS---Y 244 (325)
Q Consensus 171 ~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~---~ 244 (325)
..+...+.. ..|+++..+.||.+..+.......-...-......|++ -+...+|+|.++..++.+.. .
T Consensus 146 ~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~v~fL~S~~s~~it 219 (234)
T d1o5ia_ 146 TGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMR------RMAKPEEIASVVAFLCSEKASYLT 219 (234)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTS------SCBCHHHHHHHHHHHHSGGGTTCC
T ss_pred HHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhChhhcCCc
Confidence 544444443 34899999999998766321100000011222222332 26789999999999986433 3
Q ss_pred CceEEeeCCC
Q 020476 245 RGVINGTAPN 254 (325)
Q Consensus 245 ~~~~~~~~~~ 254 (325)
+.++.+.+|-
T Consensus 220 G~~i~vDGG~ 229 (234)
T d1o5ia_ 220 GQTIVVDGGL 229 (234)
T ss_dssp SCEEEESTTC
T ss_pred CcEEEECccc
Confidence 4478787774
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.73 E-value=3.3e-17 Score=133.94 Aligned_cols=215 Identities=14% Similarity=0.119 Sum_probs=146.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..|.++||||++.||+++++.|+++|++|++.+|+.+...... ..........+|+.|++++.++++ ++
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i 88 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 88 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence 4578999999999999999999999999999999876533221 111112245689999988876654 78
Q ss_pred CEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++||+|+.... .+...+.++..+++|+.++..+.+++ ++ .+.+++|++||... ... .+.
T Consensus 89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~--~~~G~IVnisS~~~--~~~---------~~~ 155 (251)
T d2c07a1 89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMIN--NRYGRIINISSIVG--LTG---------NVG 155 (251)
T ss_dssp CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH--HTCEEEEEECCTHH--HHC---------CTT
T ss_pred eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCccccc--CCCeEEEEECCHHh--cCC---------CCC
Confidence 999999997544 34456788999999999877766643 44 45679999999865 211 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|...+.+...+..+ .|+++..|.||.+..+..... ..... ......|++ -+...+|+|.++
T Consensus 156 ~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~--~~~~~~pl~------R~~~pedvA~~v 227 (251)
T d2c07a1 156 QANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKK--NIISNIPAG------RMGTPEEVANLA 227 (251)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHH--HHHTTCTTS------SCBCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHH--HHHhcCCCC------CCcCHHHHHHHH
Confidence 4467 6776666555555443 589999999999987642211 11111 222223332 267899999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
..++.+.. ..| ++.+.+|-
T Consensus 228 ~fL~S~~s~~itG~~i~vDGG~ 249 (251)
T d2c07a1 228 CFLSSDKSGYINGRVFVIDGGL 249 (251)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCchhCCCcCcEEEECCCc
Confidence 99986543 344 77777763
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.72 E-value=3e-17 Score=134.64 Aligned_cols=220 Identities=16% Similarity=0.079 Sum_probs=142.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
.++||||++.||+++++.|+++|++|++.+|++++..... ..........+|+.|++++.++++ ++|++
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI 82 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 3599999999999999999999999999999876543321 111112244689999988876653 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY 164 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y 164 (325)
|||||.... .+.+.+.++..+++|+.++..+.+++... .....+++++||... +.. .+....|
T Consensus 83 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~--~~~---------~~~~~~Y 151 (255)
T d1gega_ 83 VNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAG--HVG---------NPELAVY 151 (255)
T ss_dssp EECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGG--TSC---------CTTBHHH
T ss_pred EecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhh--ccc---------Ccccccc
Confidence 999997533 34567788999999999988877654221 123456888888765 211 1223457
Q ss_pred -HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCC-------CCCcceeeeccHHHHHH
Q 020476 165 -LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPL-------GSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 165 -~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~v~D~a~ 233 (325)
.+|.....+...+..+ .|+++..+.||.+-.+. +..+........+.+. .......-+...+|+|+
T Consensus 152 ~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~ 228 (255)
T d1gega_ 152 SSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPM---WAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLSEPEDVAA 228 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHH---HHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred hhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChH---HhhhhhhhHhhhcccchhHHHHHHhcCCCCCCcCHHHHHH
Confidence 6676666555544443 48999999999885441 1111111111111110 01111122678999999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
+++.++.... ..| ++.+.+|-.
T Consensus 229 ~v~fL~S~~a~~itG~~i~vDGG~~ 253 (255)
T d1gega_ 229 CVSYLASPDSDYMTGQSLLIDGGMV 253 (255)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSSSS
T ss_pred HHHHHhCchhCCccCcEEEecCCEE
Confidence 9999996533 344 787877753
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.71 E-value=9.8e-17 Score=131.54 Aligned_cols=220 Identities=14% Similarity=0.075 Sum_probs=146.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC------CCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP------GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.++++||||++.||+++++.|+++|++|.+.+|+.++...... .........+|+.|++++.++++ +
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 83 (258)
T d1iy8a_ 4 DRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGR 83 (258)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhCC
Confidence 4789999999999999999999999999999998765332111 01111234679999998876653 6
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|++||.... .+ .+.
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~-~~----------~~~ 152 (258)
T d1iy8a_ 84 IDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI-RG----------IGN 152 (258)
T ss_dssp CSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT-SB----------CSS
T ss_pred CCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc-cC----------CCC
Confidence 8999999996422 24467789999999999988777654221 1456789999998651 11 122
Q ss_pred CCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-c-----cchHHHH-HHHcCCCCCCCcceeeeccHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L-----AKMIPLF-MMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~-----~~~~~~~-~~~~~~~~~~~~~~~~~v~v~ 229 (325)
...| .+|.....+...+..+ .|+++..+.||.+..+.... . ....... ......|++ -+...+
T Consensus 153 ~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~~p~ 226 (258)
T d1iy8a_ 153 QSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSK------RYGEAP 226 (258)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTC------SCBCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCC------CCcCHH
Confidence 4467 6776666555555443 48999999999987542100 0 0000111 122222222 267899
Q ss_pred HHHHHHHHHHcCCC--CCc-eEEeeCCCCC
Q 020476 230 DIVNLIYEALSNPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~-~~~~~~~~~~ 256 (325)
|+|++++.++.... ..| ++.+.+|.+-
T Consensus 227 dvA~~v~fL~S~~s~~itG~~i~VDGG~sa 256 (258)
T d1iy8a_ 227 EIAAVVAFLLSDDASYVNATVVPIDGGQSA 256 (258)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTTTT
T ss_pred HHHHHHHHHhCchhcCCcCceEEcCcchhc
Confidence 99999999996533 344 8888888653
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.70 E-value=3.5e-16 Score=129.20 Aligned_cols=224 Identities=11% Similarity=0.023 Sum_probs=146.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
..|++|||||++.||.++++.|+++|++|++.+|+.++.+.... ......+..+|+.|+++++++++ ++|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 35789999999999999999999999999999998765432211 11111234689999988877664 689
Q ss_pred EEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++||+||.... .....+.++..+++|+.++..+.+++... ..+..++|++||... +.... +..
T Consensus 85 ~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~--~~~~~--------~~~ 154 (268)
T d2bgka1 85 IMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISS--FTAGE--------GVS 154 (268)
T ss_dssp EEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGG--TCCCT--------TSC
T ss_pred eeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccc--ccccc--------ccc
Confidence 99999996432 23356678899999999977766654321 145568999998765 21110 112
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHHH---HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLF---MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
..| .+|.....+...+..+ .|+++..+.||.+..+.... ...-.... ......+. .-+...+|+|+
T Consensus 155 ~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~------gr~~~pedvA~ 228 (268)
T d2bgka1 155 HVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLK------GTLLRAEDVAD 228 (268)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSC------SCCCCHHHHHH
T ss_pred cccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccC------CCCcCHHHHHH
Confidence 246 5676666555554443 48999999999998764211 11111111 11111111 12678999999
Q ss_pred HHHHHHcCCC---CCceEEeeCCCCCCH
Q 020476 234 LIYEALSNPS---YRGVINGTAPNPVRL 258 (325)
Q Consensus 234 a~~~~~~~~~---~~~~~~~~~~~~~s~ 258 (325)
+++.++.+.. .+.++.+.+|.+.+.
T Consensus 229 ~v~fL~S~~s~~itGq~i~VDGG~t~~~ 256 (268)
T d2bgka1 229 AVAYLAGDESKYVSGLNLVIDGGYTRTN 256 (268)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHhChhhCCccCceEEECcCcccCC
Confidence 9999996533 344888888864443
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.70 E-value=1.4e-16 Score=130.80 Aligned_cols=217 Identities=13% Similarity=0.072 Sum_probs=145.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC--------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~--------~ 86 (325)
..++++||||++.||+++++.|+++|++|++.+|++++.+.... .........+|+.|++++.++++ .
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 45789999999999999999999999999999998765433211 11111234589998887765542 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++||+||.... .+.+.+.++..+++|+.++..+.+++ ++ .+..++|++||... .. ..+
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~--~~~G~Ii~isS~~~--~~---------~~~ 153 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKA--SERGNVVFISSVSG--AL---------AVP 153 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TSSEEEEEECCGGG--TS---------CCT
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhh--hccccccccccccc--cc---------ccc
Confidence 8999999997533 44567788899999999877766654 44 45678999999865 21 112
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-c--cchHHHH-HHHcCCCCCCCcceeeeccHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-L--AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~--~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
....| .+|.....+...+..+ .++++..|.||.|..+.... . ....... +.....|++ -+...+|+
T Consensus 154 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~pedv 227 (259)
T d2ae2a_ 154 YEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALR------RMGEPKEL 227 (259)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTC------SCBCHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCC------CCcCHHHH
Confidence 23457 6776666655555543 48999999999987542100 0 0001111 222233332 26778999
Q ss_pred HHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 232 VNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
|++++.++.... ..| ++.+.+|-
T Consensus 228 A~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 228 AAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCchhCCCcCcEEEECCCe
Confidence 999999986533 344 77777764
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.70 E-value=5.3e-17 Score=133.59 Aligned_cols=222 Identities=13% Similarity=0.067 Sum_probs=141.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc-ccccC----C-CCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK-AELIF----P-GKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~-~~~~~----~-~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+++|||||++.||+++++.|+++|++|++.+|+... .+... . .........+|+.|++++.++++ +
T Consensus 4 gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 83 (260)
T d1x1ta1 4 GKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGR 83 (260)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSC
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999999999997532 21111 0 01111245689999998877664 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.++ +++ .+..++|++||.... .+ .+
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~--~~~G~Iv~isS~~~~-~~----------~~ 150 (260)
T d1x1ta1 84 IDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKK--QGFGRIINIASAHGL-VA----------SA 150 (260)
T ss_dssp CSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEECCGGGT-SC----------CT
T ss_pred CcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhh--cCCceEeecccccce-ec----------cC
Confidence 8999999997644 3456778899999999887666554 444 455799999998761 11 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHHHHHH----cCCCCCCCcceeeeccHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPLFMMF----AGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~v~v~D 230 (325)
....| .+|.........+..+ .|+++..+.||.+-.+.... ........... ....+.......-+...+|
T Consensus 151 ~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~g~ped 230 (260)
T d1x1ta1 151 NKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSLQFVTPEQ 230 (260)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTCCCBCHHH
T ss_pred CcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCCCCCcCHHH
Confidence 33457 6776666555555443 58999999999987653110 00000000000 0000000011123678999
Q ss_pred HHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 231 IVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 231 ~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+|++++.++.... ..| ++.+.+|-
T Consensus 231 iA~~v~fL~S~~a~~itG~~i~vDGG~ 257 (260)
T d1x1ta1 231 LGGTAVFLASDAAAQITGTTVSVDGGW 257 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhChhhCCCcCCEEEECcch
Confidence 9999999986533 344 77777763
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.70 E-value=2.1e-16 Score=129.28 Aligned_cols=213 Identities=14% Similarity=0.062 Sum_probs=145.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-------CCCEEEECC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-------GSTAVVNLA 94 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~vi~~a 94 (325)
+++||||++.||..+++.|++.|++|.+.+|+.+..+...... ..+..+|+.+.+++.++++ ++|++||||
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~--~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNA 79 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFA--ETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSND 79 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHH--HHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhh--CcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 6899999999999999999999999999999876544332211 1255689998887776653 689999999
Q ss_pred CCCCC----CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 95 GTPIG----TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 95 ~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|.... .+...++++..+++|+.++..+.++ +++ .+..++|++||... +... +....| .
T Consensus 80 g~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~--~~~G~IV~isS~~~--~~~~---------~~~~~Y~a 146 (252)
T d1zmta1 80 IFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKK--RKSGHIIFITSATP--FGPW---------KELSTYTS 146 (252)
T ss_dssp CCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCCEEEEECCSTT--TSCC---------TTCHHHHH
T ss_pred cCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcc--cccceeeccccccc--cccc---------cccccccc
Confidence 86422 3445677888999999887766655 444 45678999999865 3211 223457 6
Q ss_pred HHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccch-----HH-HH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKM-----IP-LF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~-----~~-~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
+|.....+...+..+ +++++..+.||.+-.+........ .+ .. ......|++ -+...+|+|.++
T Consensus 147 sKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~------R~g~pedvA~~v 220 (252)
T d1zmta1 147 ARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQ------RLGTQKELGELV 220 (252)
T ss_dssp HHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSS------SCBCHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCC------CCcCHHHHHHHH
Confidence 776666555554443 489999999999987642211000 00 11 112222332 267899999999
Q ss_pred HHHHcCCC---CCceEEeeCCCC
Q 020476 236 YEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 236 ~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+.++.+.. .+.++.+.+|-+
T Consensus 221 ~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 221 AFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp HHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHhCchhcCCcCCeEEECCCce
Confidence 99997654 344888888753
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.69 E-value=9.1e-17 Score=131.74 Aligned_cols=219 Identities=15% Similarity=0.111 Sum_probs=144.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC--------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ--------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~--------~ 86 (325)
..+++|||||++.||++++++|+++|++|++.+|++++.+... ..........+|+.+.++++++++ .
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999875533221 111112234689999887765542 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|+++|+||.... .+...+.+...+++|+.++..+.+++... ..+..++|++||... ... .+..
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~--~~~---------~~~~ 153 (258)
T d1ae1a_ 85 LNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAG--FSA---------LPSV 153 (258)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGG--TSC---------CTTC
T ss_pred cEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccccccccccccccccccccc--ccc---------cccc
Confidence 8999999998644 44467789999999999987776654321 146678999999876 221 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-c---chHHHH-HHHcCCCCCCCcceeeeccHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-A---KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~---~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
..| .+|...+.....+..+ .++++..+.||.+..+..... . ..-... ......|++ -+...+|+|
T Consensus 154 ~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg------R~~~pediA 227 (258)
T d1ae1a_ 154 SLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMG------RAGKPQEVS 227 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTC------SCBCHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHH
Confidence 456 6676666655555443 489999999999987632111 0 001111 111222222 278999999
Q ss_pred HHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 233 NLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 233 ~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
.++..++.+.. ..| .+.+.+|-
T Consensus 228 ~~v~fL~S~~s~~itG~~i~vDGG~ 252 (258)
T d1ae1a_ 228 ALIAFLCFPAASYITGQIIWADGGF 252 (258)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhChhhCCCcCcEEEeCCCe
Confidence 99999996433 345 77777764
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.69 E-value=4.4e-17 Score=133.75 Aligned_cols=220 Identities=13% Similarity=0.066 Sum_probs=133.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC--------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ--------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~--------~ 86 (325)
..++++||||++.||.++++.|++.|++|++.+|++++...... .........+|+.+++++.++++ .
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999999999999999998765433211 11111244578888887665542 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++|||||.... .+.+.++++..+++|+.++..+.+++... ..+..++|++||.... .+ .+..
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~-~~----------~~~~ 155 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGV-VS----------ASVG 155 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC---------------------C
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccc-cc----------cccc
Confidence 8999999997533 44567788999999999977776654321 0456799999998651 11 1234
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
..| .+|.....+...+..+ .|+++..|.||.+-.+..... ...... ..+.......-+...+|+|.+++.
T Consensus 156 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~--~~~~~~----~~~~~~~pl~R~~~pedvA~~v~f 229 (259)
T d1xq1a_ 156 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAV--YDDEFK----KVVISRKPLGRFGEPEEVSSLVAF 229 (259)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------------CCGGGGHHHHHH
T ss_pred ccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhh--chHHHH----HHHHhCCCCCCCcCHHHHHHHHHH
Confidence 567 6776666555544443 489999999999876532110 000000 000111111236678999999999
Q ss_pred HHcCCC--CCc-eEEeeCCCC
Q 020476 238 ALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 238 ~~~~~~--~~~-~~~~~~~~~ 255 (325)
++.+.. ..| ++.+.+|..
T Consensus 230 L~S~~s~~iTG~~i~vDGG~s 250 (259)
T d1xq1a_ 230 LCMPAASYITGQTICVDGGLT 250 (259)
T ss_dssp HTSGGGTTCCSCEEECCCCEE
T ss_pred HhCchhcCCcCcEEEeCCCEE
Confidence 886432 334 777777643
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.69 E-value=2.1e-16 Score=129.89 Aligned_cols=218 Identities=14% Similarity=0.078 Sum_probs=144.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..++++||||++.||+++++.|++.|++|++.+|+++..+... ..........+|+.|++++.++++ ++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999999999999999999875543221 111112244689999887776653 68
Q ss_pred CEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 88 TAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 88 d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
|++||+||.... .+.+.+.+...+++|+.++..+.+++... ..+..++|++||... +.. .+..
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~--~~~---------~~~~ 152 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG--VKG---------PPNM 152 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH--HSC---------CTTB
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh--ccC---------Ccch
Confidence 999999996422 34567789999999999977776654321 145579999999875 221 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC-------------CcccchHH-HH-HHHcCCCCCCCcce
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG-------------GALAKMIP-LF-MMFAGGPLGSGQQW 222 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~-------------~~~~~~~~-~~-~~~~~~~~~~~~~~ 222 (325)
..| .+|.....+...+..+ .|+++..+.||.|-.+.. ......-. .. ......|++
T Consensus 153 ~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~----- 227 (260)
T d1zema1 153 AAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGSVPMR----- 227 (260)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHTSTTS-----
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhcCCCC-----
Confidence 457 6676666555544443 489999999999876520 00000000 00 111222222
Q ss_pred eeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 223 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
-+...+|+|.+++.++.+.. ..| ++.+.+|
T Consensus 228 -R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 228 -RYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp -SCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred -CCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 25678999999999997533 334 6666554
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.69 E-value=1.4e-16 Score=129.57 Aligned_cols=214 Identities=15% Similarity=0.086 Sum_probs=141.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC-CcccccCC----CCCccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR-SKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~-~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
+-||||||++.||+++++.|+++|++|++.+++. +..+.... .........+|+.|+++++++++ ++|
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 81 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999998876543 32222111 11111244689999988876653 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
++|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|++||.... .+ .+....
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~-~~----------~~~~~~ 150 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGL-IG----------NIGQAN 150 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHH-HC----------CTTCHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhc-CC----------CCCCHH
Confidence 99999997643 44567788999999999977766554321 0456799999998751 22 122346
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH--HHHcCCCCCCCcceeeeccHHHHHHHHHH
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDDIVNLIYE 237 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D~a~a~~~ 237 (325)
| .+|.....+...+..+ .|+++..+.||.+-.+.. ..+.... ......|++ -+...+|+|+++..
T Consensus 151 Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~---~~~~~~~~~~~~~~~pl~------R~~~p~dvA~~v~f 221 (244)
T d1edoa_ 151 YAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMT---AKLGEDMEKKILGTIPLG------RTGQPENVAGLVEF 221 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHH---HTTCHHHHHHHHTSCTTC------SCBCHHHHHHHHHH
T ss_pred HHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHH---HHhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHH
Confidence 7 6777666655555553 489999999998865421 1111111 122222332 26789999999998
Q ss_pred HHcCCC----CCceEEeeCCC
Q 020476 238 ALSNPS----YRGVINGTAPN 254 (325)
Q Consensus 238 ~~~~~~----~~~~~~~~~~~ 254 (325)
++..+. .+.++.+.+|-
T Consensus 222 La~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 222 LALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHCSGGGGCCSCEEEESTTT
T ss_pred HHCCchhcCCcCCeEEeCCCe
Confidence 863332 33477777764
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.68 E-value=1.7e-16 Score=130.27 Aligned_cols=216 Identities=16% Similarity=0.167 Sum_probs=145.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------CCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------GSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~~d~ 89 (325)
|.+|||||++.||+++++.|+++|++|++.+|+++..+... ..........+|+.|+++++++++ ++|+
T Consensus 3 KValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDi 82 (257)
T d2rhca1 3 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVDV 82 (257)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCSE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCCE
Confidence 46799999999999999999999999999999865543321 111112245689999998876654 6899
Q ss_pred EEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC----CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 90 VVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES----PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 90 vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~----~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
+|||||.... .+.+.+.++..+++|+.++..+.+++... ..+..++|++||... +.. .+...
T Consensus 83 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~--~~~---------~~~~~ 151 (257)
T d2rhca1 83 LVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGG--KQG---------VVHAA 151 (257)
T ss_dssp EEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGG--TSC---------CTTCH
T ss_pred EEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccc--ccc---------cccch
Confidence 9999997643 34567788999999999999998877541 024457888888765 211 12244
Q ss_pred ch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc--------chHH-HH-HHHcCCCCCCCcceeeeccH
Q 020476 163 DY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA--------KMIP-LF-MMFAGGPLGSGQQWFSWIHL 228 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~--------~~~~-~~-~~~~~~~~~~~~~~~~~v~v 228 (325)
.| .+|.....+...+..+ .|+++..+.||.+-.+...... ...+ .. ......|++ -+...
T Consensus 152 ~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~Plg------R~~~p 225 (257)
T d2rhca1 152 PYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG------RYVQP 225 (257)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTS------SCBCH
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCC------CCcCH
Confidence 57 6777666666555554 4799999999988654210000 0000 00 112222222 26789
Q ss_pred HHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 229 DDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 229 ~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+|+|++++.++.... ..| ++.+.+|
T Consensus 226 edia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 226 SEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp HHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 999999999996432 344 7777776
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.68 E-value=9.9e-17 Score=130.22 Aligned_cols=217 Identities=15% Similarity=0.132 Sum_probs=142.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||++.||+++++.|+++|++|++.+|+.++........ .......+|+.++++++++++ ++|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 3579999999999999999999999999999999887643332221 112245689999988876654 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||+|+.... .+.+.+.+...+++|+.+...+.+++.......+. +.++|+... .+ .+....| .+
T Consensus 84 innAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~-i~~~ss~a~-~~----------~~~~~~Y~~s 151 (241)
T d2a4ka1 84 AHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGS-LVLTGSVAG-LG----------AFGLAHYAAG 151 (241)
T ss_dssp EEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCE-EEEECCCTT-CC----------HHHHHHHHHC
T ss_pred ccccccccccchhhhhccccccccccccccccccccccccccccccc-eeecccccc-cc----------ccCccccchh
Confidence 999987533 34456778899999999999988877654334344 444444331 11 0112345 55
Q ss_pred HHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 167 EVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 167 k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
|...+.....+..+ .|+++..+.||.+-.+..... ..... ......|++ -+...+|+|+++..++.+.
T Consensus 152 K~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~--~~~~~~p~~------r~~~p~dva~~v~fL~S~~ 223 (241)
T d2a4ka1 152 KLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWE--QEVGASPLG------RAGRPEEVAQAALFLLSEE 223 (241)
T ss_dssp SSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHH--HHHHTSTTC------SCBCHHHHHHHHHHHHSGG
T ss_pred hHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHH--HHHhCCCCC------CCcCHHHHHHHHHHHhcch
Confidence 66666555555443 479999999999865421111 11111 222223332 2678999999999999753
Q ss_pred C--CCc-eEEeeCCCC
Q 020476 243 S--YRG-VINGTAPNP 255 (325)
Q Consensus 243 ~--~~~-~~~~~~~~~ 255 (325)
. ..| ++.+.+|.+
T Consensus 224 s~~itG~~i~vDGG~s 239 (241)
T d2a4ka1 224 SAYITGQALYVDGGRS 239 (241)
T ss_dssp GTTCCSCEEEESTTTT
T ss_pred hCCCcCceEEeCCCcc
Confidence 2 344 777877754
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.68 E-value=2.3e-16 Score=128.96 Aligned_cols=220 Identities=13% Similarity=0.061 Sum_probs=142.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCCEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GSTAV 90 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d~v 90 (325)
..++++||||++.||+++++.|+++|++|++.+|++++....... ........+|+.|.++++++++ ++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDil 84 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCeE
Confidence 357899999999999999999999999999999987654332211 1111244689998887776653 68999
Q ss_pred EECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 91 VNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 91 i~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||||.... .+.+.+.++..+++|+.++..+.+++... .....++|++||... .-. .+....| .
T Consensus 85 VnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a 153 (253)
T d1hxha_ 85 VNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSS--WLP---------IEQYAGYSA 153 (253)
T ss_dssp EECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGG--TSC---------CTTBHHHHH
T ss_pred EecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhh--hcC---------ccccccccc
Confidence 999997643 34457788999999998877766654332 123478999999865 211 1223457 6
Q ss_pred HHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCC-cc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHH
Q 020476 166 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGG-AL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEA 238 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~ 238 (325)
+|............+ +++++..+.||.+..+... .. ..... ......+ .......+...+|+|++++.+
T Consensus 154 sKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~--~~~~~~~--~~~~~gr~~~pedvA~~v~fL 229 (253)
T d1hxha_ 154 SKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSK--EMVLHDP--KLNRAGRAYMPERIAQLVLFL 229 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCH--HHHBCBT--TTBTTCCEECHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhH--HHHHhCc--cccccCCCCCHHHHHHHHHHH
Confidence 676655554443332 3599999999998754100 00 00000 0000000 011112367889999999999
Q ss_pred HcCCC--CCc-eEEeeCC
Q 020476 239 LSNPS--YRG-VINGTAP 253 (325)
Q Consensus 239 ~~~~~--~~~-~~~~~~~ 253 (325)
+.+.. ..| ++++.+|
T Consensus 230 ~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 230 ASDESSVMSGSELHADNS 247 (253)
T ss_dssp HSGGGTTCCSCEEEESSS
T ss_pred hChhhCCCcCcEEEECcc
Confidence 86533 344 7777766
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.68 E-value=9.8e-16 Score=126.85 Aligned_cols=220 Identities=15% Similarity=0.035 Sum_probs=145.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cc----cCCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-EL----IFPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~----~~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||++-||+++++.|+++|++|++.+|+.++. +. ............+|+.|++++.+.++ +
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 347999999999999999999999999999998875432 11 11111112244678889887776654 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|++||+++.... .....+.+...+++|+.++..+.+++.......+++++++|.... .+ ..+....
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~-~~---------~~~~~~~ 166 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQ-AK---------AVPKHAV 166 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGT-CS---------SCSSCHH
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccccccccccccccccccc-cc---------cccchhh
Confidence 8999999997644 345677788899999999998888776543445678888776431 11 1122345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCC------------CCcccchHHHHHHHcCCCCCCCcceeeecc
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD------------GGALAKMIPLFMMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 227 (325)
| .+|...+.....+..+ .|+++..|.||.+-.+. .................|++ -+..
T Consensus 167 Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~~~ 240 (272)
T d1g0oa_ 167 YSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLR------RVGL 240 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTC------SCBC
T ss_pred HHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCCC------CCcC
Confidence 6 6776665555444443 58999999999986531 00000111111222233332 2788
Q ss_pred HHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
.+|+|.++..++.... .+| ++.+.+|.
T Consensus 241 peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 241 PIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 9999999999997543 344 77777774
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.67 E-value=2.4e-16 Score=129.48 Aligned_cols=220 Identities=15% Similarity=0.057 Sum_probs=141.2
Q ss_pred cCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCccccc---CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELI---FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..++++||||+| -||++++++|+++|++|++..|++...... ...........+|+.|+++++++++ +
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence 457899999998 799999999999999999888875432211 1111111234689999888776653 6
Q ss_pred CCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++||+|+.... .+...+++...+++|+.++..+.+++.......+++|++||... ... .+
T Consensus 87 iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~--~~~---------~~ 155 (256)
T d1ulua_ 87 LDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS--EKV---------VP 155 (256)
T ss_dssp EEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG--TSB---------CT
T ss_pred ceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh--cCC---------CC
Confidence 8999999986421 23445667788999999999988887653223467999998765 211 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.....+..+ +|+++..+.||.+..+........-... ......|++ -+...+|+|++
T Consensus 156 ~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedvA~~ 229 (256)
T d1ulua_ 156 KYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLR------RNITQEEVGNL 229 (256)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTS------SCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCC------CCcCHHHHHHH
Confidence 23457 6776666555554443 4899999999998876432211111111 122222332 26678999999
Q ss_pred HHHHHcCCC--CCc-eEEeeCCCC
Q 020476 235 IYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 235 ~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
++.++.+.. ..| ++.+.+|.+
T Consensus 230 v~fL~S~~s~~itG~~i~VDGG~~ 253 (256)
T d1ulua_ 230 GLFLLSPLASGITGEVVYVDAGYH 253 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHhCchhCCccCCeEEECcCEe
Confidence 999997533 344 787877753
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.1e-17 Score=135.49 Aligned_cols=217 Identities=16% Similarity=0.098 Sum_probs=140.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc----CCC--CCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI----FPG--KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~----~~~--~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.|++|||||++.||+++++.|+++|++|++.+|+.++.... ... ........+|+.|+++++++++ +
T Consensus 3 GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~ 82 (254)
T d2gdza1 3 GKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFGR 82 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999987553221 111 1111234689999988877663 6
Q ss_pred CCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHH----hcCC-CCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 87 STAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLI----NESP-EGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~-~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
+|++||+||.. ...+++..+++|+.++..+..++ .+.. ....++|++||... +-. .+..
T Consensus 83 iDilVnnAg~~-----~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~--~~~---------~~~~ 146 (254)
T d2gdza1 83 LDILVNNAGVN-----NEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG--LMP---------VAQQ 146 (254)
T ss_dssp CCEEEECCCCC-----CSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CTTC
T ss_pred cCeeccccccc-----ccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhh--ccC---------CCCc
Confidence 89999999975 23456788889998766554444 3311 11246999999865 211 1223
Q ss_pred Cch-HHHHHHHHHHHH--H---hhcCCceEEEEEeceEEcCCCCc---------ccchHHHHHHHcCCCCCCCcceeeec
Q 020476 162 NDY-LAEVCREWEGTA--L---KVNKDVRLALIRIGIVLGKDGGA---------LAKMIPLFMMFAGGPLGSGQQWFSWI 226 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~--~---~~~~~~~~~ilRp~~i~g~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~v 226 (325)
..| .+|.....+.+. + ....|+++..+.||.|-.+.... .......+ .. .....-+.
T Consensus 147 ~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~------~~p~~r~~ 218 (254)
T d2gdza1 147 PVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHI--KD------MIKYYGIL 218 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHH--HH------HHHHHCCB
T ss_pred cchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHH--Hh------cCCCCCCc
Confidence 457 667655554432 1 12468999999999886431000 00000101 00 00111256
Q ss_pred cHHHHHHHHHHHHcCCCCCc-eEEeeCCCCCCHHH
Q 020476 227 HLDDIVNLIYEALSNPSYRG-VINGTAPNPVRLAE 260 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~~~~~-~~~~~~~~~~s~~e 260 (325)
..+|+|++++.+++++...| ++.+.+|..+.++|
T Consensus 219 ~pedvA~~v~fL~s~~~itG~~i~VdGG~~~~~~~ 253 (254)
T d2gdza1 219 DPPLIANGLITLIEDDALNGAIMKITTSKGIHFQD 253 (254)
T ss_dssp CHHHHHHHHHHHHHCTTCSSCEEEEETTTEEEECC
T ss_pred CHHHHHHHHHHHHcCCCCCCCEEEECCCCeeeccc
Confidence 78999999999998766455 88898887665543
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.67 E-value=3.3e-16 Score=126.97 Aligned_cols=194 Identities=15% Similarity=0.106 Sum_probs=134.0
Q ss_pred EEEECCCchHHHHHHHHHHhCCCe-------EEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC------
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQ-------VRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~-------V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
||||||++.||+++++.|+++|++ |+..+|+.+...... ..........+|+.|++++.++++
T Consensus 4 vlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (240)
T d2bd0a1 4 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVERY 83 (240)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHHT
T ss_pred EEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 799999999999999999999986 888899876543321 111112244689999988776653
Q ss_pred -CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCC--CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 86 -GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESP--EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 86 -~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~--~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++|++|||||.... .+.+.+.++..+++|+.++..+.+++.... .+.+++|++||... +.. .+
T Consensus 84 g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~--~~~---------~~ 152 (240)
T d2bd0a1 84 GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA--TKA---------FR 152 (240)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG--TSC---------CT
T ss_pred CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhh--cCC---------CC
Confidence 68999999997643 345677889999999999777655543210 45578999999876 221 12
Q ss_pred CCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
....| .+|.........+.. ..|+++..+.||.+-.+..... . ......+...+|+|+++
T Consensus 153 ~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~~---------------~-~~~~~~~~~PedvA~~v 216 (240)
T d2bd0a1 153 HSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKV---------------D-DEMQALMMMPEDIAAPV 216 (240)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCC---------------C-STTGGGSBCHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhhc---------------C-HhhHhcCCCHHHHHHHH
Confidence 24467 667665555544443 3589999999999876531111 0 01112256789999999
Q ss_pred HHHHcCCC
Q 020476 236 YEALSNPS 243 (325)
Q Consensus 236 ~~~~~~~~ 243 (325)
+.++.++.
T Consensus 217 ~~l~s~~~ 224 (240)
T d2bd0a1 217 VQAYLQPS 224 (240)
T ss_dssp HHHHTSCT
T ss_pred HHHHcCCc
Confidence 99998765
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=2.6e-16 Score=131.53 Aligned_cols=219 Identities=15% Similarity=0.085 Sum_probs=143.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC---------CCCCccccCceeecCCchhHhhhC----
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF---------PGKKTRFFPGVMIAEEPQWRDCIQ---- 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---------~~~~~~~~~~~d~~d~~~~~~~~~---- 85 (325)
..++++||||++.||+++++.|++.|++|++.+|+.++..... ..........+|+.|++++.++++
T Consensus 11 ~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~ 90 (297)
T d1yxma1 11 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 90 (297)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHHH
Confidence 4578999999999999999999999999999999865432211 001111234689999988776653
Q ss_pred ---CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 ---GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 ---~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
++|++|||||.... .....+.++..+++|+.++..+.+++... ..+..++|.+|+... .+
T Consensus 91 ~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~--~~---------- 158 (297)
T d1yxma1 91 TFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AG---------- 158 (297)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TC----------
T ss_pred HhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhcccccccccccccccc--cc----------
Confidence 68999999997533 44567788999999999988877665321 134456777765432 11
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCC-cccchHHHH--HHHcCCCCCCCcceeeeccHHH
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGG-ALAKMIPLF--MMFAGGPLGSGQQWFSWIHLDD 230 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~v~v~D 230 (325)
.+....| .+|.....+......+ .|+++..|.||.|..+... ......... ......|+ .-+...+|
T Consensus 159 ~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~pl------gR~g~ped 232 (297)
T d1yxma1 159 FPLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPA------KRIGVPEE 232 (297)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTT------SSCBCTHH
T ss_pred ccccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCC------CCCcCHHH
Confidence 1223456 6677666655555543 4899999999999765311 111100000 01111122 22667899
Q ss_pred HHHHHHHHHcCCC---CCceEEeeCCCC
Q 020476 231 IVNLIYEALSNPS---YRGVINGTAPNP 255 (325)
Q Consensus 231 ~a~a~~~~~~~~~---~~~~~~~~~~~~ 255 (325)
+|.+++.++.+.. .+.++.+.+|.+
T Consensus 233 vA~~v~fL~Sd~s~~iTG~~i~VDGG~s 260 (297)
T d1yxma1 233 VSSVVCFLLSPAASFITGQSVDVDGGRS 260 (297)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhcCcCCcEEEeCcChh
Confidence 9999999996533 344888887753
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.67 E-value=4.2e-16 Score=126.78 Aligned_cols=220 Identities=11% Similarity=-0.007 Sum_probs=143.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---hCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~~~~d~vi~~a~ 95 (325)
..+++|||||++.||+++++.|+++|++|++.+|++++.+....... .....+|+.+.+.++.. +.++|++||+||
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag 83 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPG-IQTRVLDVTKKKQIDQFANEVERLDVLFNVAG 83 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTT-EEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccC-CceeeeeccccccccccccccccceeEEeccc
Confidence 34689999999999999999999999999999998766554433221 01122344444444333 347999999999
Q ss_pred CCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHH
Q 020476 96 TPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVC 169 (325)
Q Consensus 96 ~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~ 169 (325)
.... ...+.+.++..+++|+.++..+.+++... ..+..++|++||......+ .+....| .+|..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~----------~~~~~~Y~~sKaa 153 (245)
T d2ag5a1 84 FVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG----------VVNRCVYSTTKAA 153 (245)
T ss_dssp CCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----------CTTBHHHHHHHHH
T ss_pred ccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC----------ccchhHHHHHHHH
Confidence 8644 44467788999999999988876655421 1455689999986531011 1223456 67776
Q ss_pred HHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc----cchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 170 REWEGTALKVN---KDVRLALIRIGIVLGKDGGAL----AKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 170 ~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
.+...+.+..+ .|+++..|.||.+-.+..... ....... ......|++ -+...+|+|+++..++.+
T Consensus 154 l~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pedva~~v~fL~s~ 227 (245)
T d2ag5a1 154 VIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTG------RFATAEEIAMLCVYLASD 227 (245)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTS------SCEEHHHHHHHHHHHHSG
T ss_pred HHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCC------CCcCHHHHHHHHHHHhCh
Confidence 66665555553 489999999999986531100 0000011 112222322 267889999999999975
Q ss_pred CC---CCceEEeeCCCC
Q 020476 242 PS---YRGVINGTAPNP 255 (325)
Q Consensus 242 ~~---~~~~~~~~~~~~ 255 (325)
.. .+.++.+.+|.+
T Consensus 228 ~s~~iTG~~i~VDGG~s 244 (245)
T d2ag5a1 228 ESAYVTGNPVIIDGGWS 244 (245)
T ss_dssp GGTTCCSCEEEECTTGG
T ss_pred hhCCCcCceEEeCCCcC
Confidence 43 344787877743
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.66 E-value=2.8e-16 Score=129.18 Aligned_cols=224 Identities=14% Similarity=0.076 Sum_probs=143.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
+.|++|||||++.||+++++.|++.|++|++.+|+.++....... ........+|+.|++++.++++ +
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 87 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 457899999999999999999999999999999988764332110 1111245689999998876663 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC---CCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES---PEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~---~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
+|++|||||.... .+.+.+.++..+++|+.++..+.+++... ....+.++..++... ...... .....+.
T Consensus 88 iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~--~~~~~~--~~~~~~~ 163 (260)
T d1h5qa_ 88 ISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSS--QIINQS--SLNGSLT 163 (260)
T ss_dssp EEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGG--TSCCEE--ETTEECS
T ss_pred CcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeecccc--cccccc--ccccCcc
Confidence 8999999997533 34567788899999999877766544221 034445555555443 211110 0011123
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcc-cchHHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGAL-AKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|.........+.. ..|+++..+.||.+-.+..... ..... ......|++ -+...+|+|+++
T Consensus 164 ~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~------R~g~pedvA~~v 235 (260)
T d1h5qa_ 164 QVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRD--HQASNIPLN------RFAQPEEMTGQA 235 (260)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHH--HHHHTCTTS------SCBCGGGGHHHH
T ss_pred ccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHH--HHHhcCCCC------CCcCHHHHHHHH
Confidence 4457 677666655555444 3589999999999876532111 11111 222333332 267789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
+.++.+.. ..| ++.+.+|.
T Consensus 236 ~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 236 ILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp HHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHhcchhCCCcCceEEECCCe
Confidence 99886543 344 78787774
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.66 E-value=2.5e-16 Score=129.74 Aligned_cols=221 Identities=18% Similarity=0.147 Sum_probs=138.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----C---CCccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G---KKTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~---~~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..|.++||||++.||++++++|+++|++|++.+|+.++.+.... . ........+|+.|.++++++++
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 35689999999999999999999999999999998765432211 0 0111234679999888877664
Q ss_pred -CCCEEEECCCCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|++|||||.... .....+.++..+++|+.++..+.+++... ..+..++|.++|+.....+
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~~~--------- 154 (264)
T d1spxa_ 84 GKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGLHA--------- 154 (264)
T ss_dssp SCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSSSC---------
T ss_pred CCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccccc---------
Confidence 68999999986422 12245678889999999877666554322 1133567777775432111
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-------cchHHHH-HHHcCCCCCCCcceee
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-------AKMIPLF-MMFAGGPLGSGQQWFS 224 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~ 224 (325)
.+..+.| .+|.....+...+..+ +|+++..+.||.|-.+..... ....... ......|++ -
T Consensus 155 -~~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~------R 227 (264)
T d1spxa_ 155 -TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAG------V 227 (264)
T ss_dssp -CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTS------S
T ss_pred -CCCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCC------C
Confidence 1223457 6777666555554443 489999999999876531110 0111111 111222322 2
Q ss_pred eccHHHHHHHHHHHHcCC--C-CCc-eEEeeCCCC
Q 020476 225 WIHLDDIVNLIYEALSNP--S-YRG-VINGTAPNP 255 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~--~-~~~-~~~~~~~~~ 255 (325)
+...+|+|++++.++.++ . ..| ++.+.+|.+
T Consensus 228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~s 262 (264)
T d1spxa_ 228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSS 262 (264)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CcCHHHHHHHHHHHhCCcccCCccCceEEeCCChh
Confidence 677899999999998643 2 344 788877753
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.65 E-value=2.5e-16 Score=128.77 Aligned_cols=212 Identities=10% Similarity=-0.031 Sum_probs=136.2
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC-----CCCccccCceeec-CCchhHhhh-------
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP-----GKKTRFFPGVMIA-EEPQWRDCI------- 84 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-----~~~~~~~~~~d~~-d~~~~~~~~------- 84 (325)
...++|+||||++.||.+++++|+++|.+|+++.|+.++...... ......+..+|+. +.+++.+++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 82 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL 82 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc
Confidence 346799999999999999999999999999999988765432211 1111123346766 434454433
Q ss_pred CCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCC-----CCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 85 QGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESP-----EGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 85 ~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~-----~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
.++|++|||||.. ..+.++..+++|+.++.++..++.... ....++|++||... +.. .+
T Consensus 83 g~iDilvnnAG~~-----~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~--~~~---------~~ 146 (254)
T d1sbya1 83 KTVDILINGAGIL-----DDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG--FNA---------IH 146 (254)
T ss_dssp SCCCEEEECCCCC-----CTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG--TSC---------CT
T ss_pred CCCCEEEeCCCCC-----CHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhh--ccC---------CC
Confidence 3799999999964 456678999999998777766543320 12357999998865 221 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCC---CCcccchHHHH-HHHcCCCCCCCcceeeeccHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD---GGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDI 231 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~---~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~ 231 (325)
....| .+|.........+..+ .++++..+.||+|..+- ..........+ ... ..+.....+++
T Consensus 147 ~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~e~v 217 (254)
T d1sbya1 147 QVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELL---------LSHPTQTSEQC 217 (254)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHH---------TTSCCEEHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhcc---------ccCCCCCHHHH
Confidence 23457 6666555544444443 48999999999998651 01110100000 000 11234578999
Q ss_pred HHHHHHHHcCCCCCceEEeeCCC
Q 020476 232 VNLIYEALSNPSYRGVINGTAPN 254 (325)
Q Consensus 232 a~a~~~~~~~~~~~~~~~~~~~~ 254 (325)
|++++.+++....+.++.+.+|.
T Consensus 218 a~~~~~~~~~~~tG~vi~vdgG~ 240 (254)
T d1sbya1 218 GQNFVKAIEANKNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHHHHHCCTTCEEEEETTE
T ss_pred HHHHHHhhhCCCCCCEEEECCCE
Confidence 99999999876544588887773
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.64 E-value=1.1e-15 Score=127.95 Aligned_cols=206 Identities=15% Similarity=0.072 Sum_probs=135.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC----------CccccCceeecCCchhHhhhC--
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK----------KTRFFPGVMIAEEPQWRDCIQ-- 85 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~----------~~~~~~~~d~~d~~~~~~~~~-- 85 (325)
...++++||||++.||+++++.|+++|++|++.+|+.+......... .......+|+.|.+..+++++
T Consensus 5 l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~ 84 (302)
T d1gz6a_ 5 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTA 84 (302)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHH
Confidence 34578999999999999999999999999999988754322111100 000122467777766655442
Q ss_pred -----CCCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCce
Q 020476 86 -----GSTAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEV 153 (325)
Q Consensus 86 -----~~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~ 153 (325)
++|++|||||.... .+.+.+.++..+++|+.++..+.++ +++ .+.+++|++||.... ++.
T Consensus 85 ~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~--~~~G~IV~isS~~~~-~~~----- 156 (302)
T d1gz6a_ 85 LDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKK--QNYGRIIMTASASGI-YGN----- 156 (302)
T ss_dssp HHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HTCEEEEEECCHHHH-HCC-----
T ss_pred HHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHh--CCCcEEEEeCChhhc-CCC-----
Confidence 69999999998644 4446678899999999997777665 444 455799999998752 331
Q ss_pred ecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 154 FDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 154 ~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
+....| .+|.........+..+ .|+++..+.||.+-........ ......+..+
T Consensus 157 -----~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~-----------------~~~~~~~~Pe 214 (302)
T d1gz6a_ 157 -----FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP-----------------EDLVEALKPE 214 (302)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC-----------------HHHHHHSCGG
T ss_pred -----CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc-----------------HhhHhcCCHH
Confidence 224567 6777666655555543 4899999999976322111110 0111234568
Q ss_pred HHHHHHHHHHcCCC--CCceEEeeCC
Q 020476 230 DIVNLIYEALSNPS--YRGVINGTAP 253 (325)
Q Consensus 230 D~a~a~~~~~~~~~--~~~~~~~~~~ 253 (325)
|+|.+++.++.... .+.++.+.+|
T Consensus 215 dvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 215 YVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp GTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 99999999886432 3336666554
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.64 E-value=1.2e-15 Score=125.28 Aligned_cols=220 Identities=20% Similarity=0.065 Sum_probs=140.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-ccc----CCCCCccccCceeecCCchhHhhhC-------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELI----FPGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~----~~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
..+++|||||++.||.++++.|++.|++|++..|+..+. +.. ...........+|+.|.+++.++++ +
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (259)
T d1ja9a_ 5 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 84 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcCC
Confidence 457899999999999999999999999999877655432 211 1111112245688888887776654 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
+|++||+||.... .....+.++..+++|+.+...+++++.......+++++++|.... +.. .+....
T Consensus 85 idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~-~~~---------~~~~~~ 154 (259)
T d1ja9a_ 85 LDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAV-MTG---------IPNHAL 154 (259)
T ss_dssp EEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGT-CCS---------CCSCHH
T ss_pred CcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCccccccccccc-ccC---------CCCchh
Confidence 8999999998644 334577788899999998877777665431223467677665431 211 122345
Q ss_pred h-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCC----------CCcccchHHHH--HHHcCCCCCCCcceeeecc
Q 020476 164 Y-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKD----------GGALAKMIPLF--MMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~----------~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~ 227 (325)
| .+|...+.....+..+ .|+++..|.||++-.+. ..........+ ......|++ -+..
T Consensus 155 Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~------R~g~ 228 (259)
T d1ja9a_ 155 YAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK------RIGY 228 (259)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS------SCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC------CCcC
Confidence 6 6676665555444443 48999999999986431 00000001111 112222322 3678
Q ss_pred HHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 228 LDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
.+|+|++++.++.+.. ..| ++.+.+|.
T Consensus 229 p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 229 PADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp HHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 9999999999997644 344 77777663
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.64 E-value=1.2e-16 Score=129.58 Aligned_cols=195 Identities=12% Similarity=-0.012 Sum_probs=133.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CCCccccCceeecCCchhHhhhC-------CC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GKKTRFFPGVMIAEEPQWRDCIQ-------GS 87 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~d~~d~~~~~~~~~-------~~ 87 (325)
..+.++||||++.||++++++|+++|++|++.+|+.++...... .........+|+.|.+.+.++++ ++
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 35689999999999999999999999999999998765432211 11111245689999988776653 68
Q ss_pred CEEEECCCCCCCCC---CChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIGTR---WSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~~~---~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++|||||...... ...+.++..+++|+.++..+.++ +++ .+.+++|++||... +-. .+.
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~--~~~G~Iv~isS~~~--~~~---------~~~ 152 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTK--NNHGHIVTVASAAG--HVS---------VPF 152 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHH--TTCEEEEEECCCC---CCC---------HHH
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHh--cCCceEEEeecchh--cCC---------CCC
Confidence 99999999864422 23445678899999987766554 445 56678999999876 211 111
Q ss_pred CCch-HHHHHHHHHHHHHhhc------CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKVN------KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~~------~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
.+.| .+|.......+.+..+ .|+.++.+.||+|-.+.... .. ......+..+|+|+
T Consensus 153 ~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~---~~--------------~~~~~~~~pe~va~ 215 (244)
T d1yb1a_ 153 LLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN---PS--------------TSLGPTLEPEEVVN 215 (244)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC---TH--------------HHHCCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC---cC--------------ccccCCCCHHHHHH
Confidence 3456 6777666555555442 48999999999885542111 00 01113457899999
Q ss_pred HHHHHHcCCC
Q 020476 234 LIYEALSNPS 243 (325)
Q Consensus 234 a~~~~~~~~~ 243 (325)
.++..+..+.
T Consensus 216 ~i~~~~~~~~ 225 (244)
T d1yb1a_ 216 RLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHhcCC
Confidence 9998887753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.63 E-value=5.4e-15 Score=120.78 Aligned_cols=214 Identities=16% Similarity=0.143 Sum_probs=131.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCC-ccccCceeecCCchhHhhhC---------C
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKK-TRFFPGVMIAEEPQWRDCIQ---------G 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~-~~~~~~~d~~d~~~~~~~~~---------~ 86 (325)
++++||||||++.||.+++++|+++|+ .|++..|+.++...+..... ......+|+.|.++++++++ +
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~ 81 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCC
Confidence 347899999999999999999999995 68888998876554433211 12245688888887765542 3
Q ss_pred CCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-------------CCCCCCEEEEeeeeeeeecCC
Q 020476 87 STAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYGTS 149 (325)
Q Consensus 87 ~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-------------~~~~~~~v~~Ss~~v~~~g~~ 149 (325)
+|++|||||.... .....+.++..+++|+.++..+.+++... .....+++.+|+.... ....
T Consensus 82 idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~-~~~~ 160 (250)
T d1yo6a1 82 LSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRAAVITISSGLGS-ITDN 160 (250)
T ss_dssp CCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTCEEEEECCGGGC-STTC
T ss_pred eEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceecccccccccccc-ccCC
Confidence 8999999997432 33445677889999999988876665311 0112345666654331 1111
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeee
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (325)
.. .....+...| .+|.........+..+ .|+++..+.||+|-.+-.. ....
T Consensus 161 ~~---~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~----------------------~~~~ 215 (250)
T d1yo6a1 161 TS---GSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG----------------------KNAA 215 (250)
T ss_dssp CS---TTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------------------
T ss_pred cc---cccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC----------------------CCCC
Confidence 00 0011122347 6776666555554443 4899999999987643110 0113
Q ss_pred ccHHHHHHHHHHHHcCCC--CCceEEeeCCCCCCH
Q 020476 226 IHLDDIVNLIYEALSNPS--YRGVINGTAPNPVRL 258 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~--~~~~~~~~~~~~~s~ 258 (325)
+..++.++.++..+.... ..|.|...++.|+.|
T Consensus 216 ~~~e~~a~~~~~~~~~~~~~~sG~f~~~~g~p~~w 250 (250)
T d1yo6a1 216 LTVEQSTAELISSFNKLDNSHNGRFFMRNLKPYEF 250 (250)
T ss_dssp ---HHHHHHHHHHHTTCCGGGTTCEEETTEEECCC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCeEEECCCCeeCCC
Confidence 567888998888887644 456665555656543
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.63 E-value=1.2e-15 Score=126.20 Aligned_cols=219 Identities=17% Similarity=0.114 Sum_probs=139.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----C---CCccccCceeecCCchhHhhhC-------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----G---KKTRFFPGVMIAEEPQWRDCIQ------- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~---~~~~~~~~~d~~d~~~~~~~~~------- 85 (325)
.++++||||++.||+++++.|++.|++|++.+|+.++.+.... . ........+|+.|++++.++++
T Consensus 4 gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 83 (274)
T d1xhla_ 4 GKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKFG 83 (274)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999999999998755332211 1 0111234579999988776653
Q ss_pred CCCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcC--CCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 86 GSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINES--PEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 86 ~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
++|++|||||.... ...+.+.++..+++|+.++..+.+++... ..+..+++++||... ... .
T Consensus 84 ~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~--~~~---------~ 152 (274)
T d1xhla_ 84 KIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAG--PQA---------H 152 (274)
T ss_dssp CCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGS--SSC---------C
T ss_pred CceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhc--ccc---------C
Confidence 68999999986422 22245678889999999877766655322 034456666665443 111 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---c----cchHHHHHH-HcCCCCCCCcceeeec
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---L----AKMIPLFMM-FAGGPLGSGQQWFSWI 226 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~----~~~~~~~~~-~~~~~~~~~~~~~~~v 226 (325)
+....| .+|............+ .|+++..+.||.|-.+.... . ......... ....|++ -+.
T Consensus 153 ~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlg------R~g 226 (274)
T d1xhla_ 153 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVG------HCG 226 (274)
T ss_dssp TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS------SCB
T ss_pred CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCC------CCc
Confidence 223457 6676665555444433 48999999999997652100 0 000111111 1111222 267
Q ss_pred cHHHHHHHHHHHHcCC---CCCc-eEEeeCCCC
Q 020476 227 HLDDIVNLIYEALSNP---SYRG-VINGTAPNP 255 (325)
Q Consensus 227 ~v~D~a~a~~~~~~~~---~~~~-~~~~~~~~~ 255 (325)
..+|+|++++.++..+ ...| ++.+.+|..
T Consensus 227 ~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 227 KPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp CHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 8999999999988632 2344 888888754
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.62 E-value=2.4e-15 Score=123.17 Aligned_cols=207 Identities=15% Similarity=0.068 Sum_probs=134.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCC----CC--CccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFP----GK--KTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.+.+|||||++.||.++++.|+++|++|++.+|+.++.+.... .. .......+|+.+++++.++++ +
T Consensus 10 ~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g~ 89 (257)
T d1xg5a_ 10 DRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 89 (257)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999999999999999999999999998765433211 11 111234689999987776653 6
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|++|||||.... .+.+.+.++..+++|+.+...+.+++ ++......++|++||... +...+. +
T Consensus 90 iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~--~~~~p~-------~ 160 (257)
T d1xg5a_ 90 VDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSG--HRVLPL-------S 160 (257)
T ss_dssp CSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGG--TSCCSC-------G
T ss_pred CCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHh--cCCCCC-------c
Confidence 8999999997533 44567888999999998877765544 332223578999999865 211100 1
Q ss_pred CCCch-HHHHHHHHHHHHHh-----hcCCceEEEEEeceEEcCCCCc-ccchHHHHHHHcCCCCCCCcceeeeccHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALK-----VNKDVRLALIRIGIVLGKDGGA-LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIV 232 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~-----~~~~~~~~ilRp~~i~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a 232 (325)
....| .+|.........+. ...++++..+.||.+-.+.... ........... .....+...+|+|
T Consensus 161 ~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~--------~~~~r~~~pedvA 232 (257)
T d1xg5a_ 161 VTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAAT--------YEQMKCLKPEDVA 232 (257)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHH--------HC---CBCHHHHH
T ss_pred ccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhc--------CCCCCCcCHHHHH
Confidence 12346 66666655554443 2358999999998775442100 00111111100 1112367899999
Q ss_pred HHHHHHHcCCC
Q 020476 233 NLIYEALSNPS 243 (325)
Q Consensus 233 ~a~~~~~~~~~ 243 (325)
++++.+++++.
T Consensus 233 ~~v~fL~s~~a 243 (257)
T d1xg5a_ 233 EAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHSCT
T ss_pred HHHHHHhCChh
Confidence 99999998764
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.62 E-value=2.8e-16 Score=130.19 Aligned_cols=221 Identities=15% Similarity=0.067 Sum_probs=137.6
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-CCccccCceeecCCchhHhhhC-------CCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
....++++||||++.||+++++.|+++|++|++.+|+.++....... ........+|+.+.+++.++++ .+|
T Consensus 2 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 81 (276)
T d1bdba_ 2 KLKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKID 81 (276)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcc
Confidence 34457899999999999999999999999999999987654332211 1111244678888887776653 789
Q ss_pred EEEECCCCCCCCC--------CChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 89 AVVNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 89 ~vi~~a~~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
++||+||...... ...+.++..+++|+.++..+.+++... .....++|+++|.... .+ .+
T Consensus 82 ilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~g~iI~i~S~~~~-~~----------~~ 150 (276)
T d1bdba_ 82 TLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASRGNVIFTISNAGF-YP----------NG 150 (276)
T ss_dssp EEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT-ST----------TS
T ss_pred cccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcCCCceeeeechhc-cC----------CC
Confidence 9999999642211 112347888999998877766554321 0123678898887541 22 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc--CCceEEEEEeceEEcCCCCccc-chH-------HHH-HHHcCCCCCCCcceeeecc
Q 020476 160 SGNDY-LAEVCREWEGTALKVN--KDVRLALIRIGIVLGKDGGALA-KMI-------PLF-MMFAGGPLGSGQQWFSWIH 227 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~--~~~~~~ilRp~~i~g~~~~~~~-~~~-------~~~-~~~~~~~~~~~~~~~~~v~ 227 (325)
....| .+|............+ .++++..+.||.|-.+-..... ... ... ......|++ -+..
T Consensus 151 ~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R~g~ 224 (276)
T d1bdba_ 151 GGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPIG------RMPE 224 (276)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTTS------SCCC
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCCC------CCcC
Confidence 23457 6676555444444332 2599999999998655211110 000 001 111112222 2567
Q ss_pred HHHHHHHHHHHHcCC---C-CCceEEeeCCC
Q 020476 228 LDDIVNLIYEALSNP---S-YRGVINGTAPN 254 (325)
Q Consensus 228 v~D~a~a~~~~~~~~---~-~~~~~~~~~~~ 254 (325)
.+|+|.+++.++..+ . .+.++++.+|-
T Consensus 225 peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 225 VEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp GGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred HHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 899999998887532 2 34488887773
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.62 E-value=7.9e-16 Score=127.25 Aligned_cols=222 Identities=18% Similarity=0.130 Sum_probs=140.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC----CCC---CccccCceeecCCchhHhhhC------
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF----PGK---KTRFFPGVMIAEEPQWRDCIQ------ 85 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----~~~---~~~~~~~~d~~d~~~~~~~~~------ 85 (325)
..++++||||++.||+++++.|+++|++|++.+|+.++..... ... .......+|+.|+++++++++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999999999999999999999999999999876533221 110 111234689999988776654
Q ss_pred -CCCEEEECCCCCCCC-------CCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecC
Q 020476 86 -GSTAVVNLAGTPIGT-------RWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDE 156 (325)
Q Consensus 86 -~~d~vi~~a~~~~~~-------~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e 156 (325)
++|++|||||..... +...+.+...+++|+.++..+.+++... ..+...+|+++|+..+..+
T Consensus 84 g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~~~~--------- 154 (272)
T d1xkqa_ 84 GKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAGPQA--------- 154 (272)
T ss_dssp SCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSSC---------
T ss_pred CCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhccccC---------
Confidence 689999999975432 1234457888999999877776654332 0123456666665321111
Q ss_pred CCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc---ccchH----HHH-HHHcCCCCCCCcceee
Q 020476 157 SSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA---LAKMI----PLF-MMFAGGPLGSGQQWFS 224 (325)
Q Consensus 157 ~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~---~~~~~----~~~-~~~~~~~~~~~~~~~~ 224 (325)
.+....| .+|.....+...+..+ .|+++..+.||.|-.+.... ..... ... ......|++ -
T Consensus 155 -~~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg------R 227 (272)
T d1xkqa_ 155 -QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG------A 227 (272)
T ss_dssp -CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS------S
T ss_pred -CCCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC------C
Confidence 1223457 6676666555555443 58999999999987552100 00001 111 111111222 2
Q ss_pred eccHHHHHHHHHHHHcCC---CCCc-eEEeeCCCCC
Q 020476 225 WIHLDDIVNLIYEALSNP---SYRG-VINGTAPNPV 256 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~---~~~~-~~~~~~~~~~ 256 (325)
+...+|+|++++.++..+ ...| ++.+.+|..+
T Consensus 228 ~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~l 263 (272)
T d1xkqa_ 228 AGKPEHIANIILFLADRNLSFYILGQSIVADGGTSL 263 (272)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGG
T ss_pred CcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHHH
Confidence 678999999999998632 2344 8888887544
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.61 E-value=9.3e-15 Score=120.11 Aligned_cols=202 Identities=15% Similarity=0.141 Sum_probs=137.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCccccc-------CCCCCccccCceeecCCchhHhhhC------C
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ------G 86 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~-------~~~~~~~~~~~~d~~d~~~~~~~~~------~ 86 (325)
.++|||||+|.||.+++++|+++|+ .|+.+.|+....+.. ........+..+|+.|.+++.++++ +
T Consensus 10 gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i~~~~~ 89 (259)
T d2fr1a1 10 GTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGIGDDVP 89 (259)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTSCTTSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhcccccccc
Confidence 4899999999999999999999998 588888864332111 1111112245689999988887764 4
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCc
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGND 163 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~ 163 (325)
.|.|+|++|.... .+...+.....+++|+.++.++.++++. ....++|++||.... +|. +....
T Consensus 90 i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~--~~~~~iv~~SS~a~~-~g~----------~~~~~ 156 (259)
T d2fr1a1 90 LSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE--LDLTAFVLFSSFASA-FGA----------PGLGG 156 (259)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT--SCCSEEEEEEEHHHH-TCC----------TTCTT
T ss_pred ccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc--cCCceEeeecchhhc-cCC----------cccHH
Confidence 7999999997644 3334556677889999999999998887 667789999998762 332 23456
Q ss_pred h-HHHHHHHHHHHHHhhcCCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCC
Q 020476 164 Y-LAEVCREWEGTALKVNKDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNP 242 (325)
Q Consensus 164 y-~~k~~~~~~~~~~~~~~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~ 242 (325)
| .+|...+.....+.. .|++++.|.||.+.+.+-... .... .+ .......+..+++++++..++..+
T Consensus 157 YaAaka~l~~la~~~~~-~Gi~v~~I~pg~~~~~g~~~~-~~~~--------~~--~~~G~~~~~~~~~~~~l~~~l~~~ 224 (259)
T d2fr1a1 157 YAPGNAYLDGLAQQRRS-DGLPATAVAWGTWAGSGMAEG-PVAD--------RF--RRHGVIEMPPETACRALQNALDRA 224 (259)
T ss_dssp THHHHHHHHHHHHHHHH-TTCCCEEEEECCBC---------------------C--TTTTEECBCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhHHHHHHHHHh-CCCCEEECCCCcccCCccccc-hHHH--------HH--HhcCCCCCCHHHHHHHHHHHHhCC
Confidence 7 677666666555544 599999999998877642110 0000 00 011134678999999999999887
Q ss_pred CCCce
Q 020476 243 SYRGV 247 (325)
Q Consensus 243 ~~~~~ 247 (325)
.....
T Consensus 225 ~~~~~ 229 (259)
T d2fr1a1 225 EVCPI 229 (259)
T ss_dssp CSSCE
T ss_pred CceEE
Confidence 64443
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.61 E-value=2.8e-15 Score=121.34 Aligned_cols=199 Identities=16% Similarity=0.081 Sum_probs=129.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhH-------hhhC--CCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR-------DCIQ--GSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~-------~~~~--~~d~v 90 (325)
.|+||||||+|.||+++++.|+++|++|.+++|+......... ...++..+.+... +.+. ++|++
T Consensus 2 gK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~l 75 (236)
T d1dhra_ 2 ARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEASASV------IVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 75 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSSEEE------ECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccccccc------eeecccCcHHHHHHHHHHHHHHhCCCCceEE
Confidence 4799999999999999999999999999999987654321111 1122332222221 2222 48999
Q ss_pred EECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-H
Q 020476 91 VNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-L 165 (325)
Q Consensus 91 i~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~ 165 (325)
|||||.... .....+.++..+++|+.++..+.+++........++|++||... ... .+....| .
T Consensus 76 InnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~--~~~---------~~~~~~Y~a 144 (236)
T d1dhra_ 76 LCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAA--LDG---------TPGMIGYGM 144 (236)
T ss_dssp EECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSC---------CTTBHHHHH
T ss_pred EECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHH--cCC---------ccCCcccHH
Confidence 999985322 12224567778999999988877766543223468999999865 221 1223467 7
Q ss_pred HHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHc
Q 020476 166 AEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALS 240 (325)
Q Consensus 166 ~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~ 240 (325)
+|...+...+.+..+ .++++..+.||.+..+. . +... + . ...-.++..+++++.+..+++
T Consensus 145 sKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~-------~---~~~~--~--~-~~~~~~~~pe~va~~~~~l~s 209 (236)
T d1dhra_ 145 AKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPM-------N---RKSM--P--E-ADFSSWTPLEFLVETFHDWIT 209 (236)
T ss_dssp HHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHH-------H---HHHS--T--T-SCGGGSEEHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCc-------c---hhhC--c--c-chhhcCCCHHHHHHHHHHHhC
Confidence 788777777776654 47999999999987541 1 1110 1 0 111236778999999999987
Q ss_pred CCC---CCceEEe
Q 020476 241 NPS---YRGVING 250 (325)
Q Consensus 241 ~~~---~~~~~~~ 250 (325)
... .++.+.+
T Consensus 210 ~~~~~i~G~~i~v 222 (236)
T d1dhra_ 210 GNKRPNSGSLIQV 222 (236)
T ss_dssp TTTCCCTTCEEEE
T ss_pred CCccCCCCCeEEE
Confidence 643 3345544
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.59 E-value=1.5e-14 Score=117.96 Aligned_cols=169 Identities=14% Similarity=0.090 Sum_probs=114.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHh---CCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhC--------
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQ-------- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~-------- 85 (325)
|++||||||++.||.+++++|++ +|++|++.+|++++...+.. .........+|+.|+++++++++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~ 81 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKD 81 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhc
Confidence 67899999999999999999974 68999999999876543321 11112245689999887765432
Q ss_pred -CCCEEEECCCCCCC----CCCChhhHHHHHHHhhHHHHHHHHHHhcC-------------CCCCCCEEEEeeeeeeeec
Q 020476 86 -GSTAVVNLAGTPIG----TRWSSEIKKEIKESRIRVTSKVVDLINES-------------PEGVRPSVLVSATALGYYG 147 (325)
Q Consensus 86 -~~d~vi~~a~~~~~----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-------------~~~~~~~v~~Ss~~v~~~g 147 (325)
++|++|||||.... .+...+..+..+++|+.++..+.+++... ..+..++|.+||.... .+
T Consensus 82 ~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~-~~ 160 (248)
T d1snya_ 82 QGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGS-IQ 160 (248)
T ss_dssp GCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGC-ST
T ss_pred CCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccc-cC
Confidence 58999999997432 23455667889999999988776664321 0234678999886531 11
Q ss_pred CCCCceecCCCCCCCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcC
Q 020476 148 TSETEVFDESSPSGNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGK 196 (325)
Q Consensus 148 ~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~ 196 (325)
.. ..+....| .+|.........+.. ..++++..+.||++-.+
T Consensus 161 ~~-------~~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 161 GN-------TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp TC-------CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred CC-------CCCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 10 11123357 677666555444433 34899999999988655
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.57 E-value=1.1e-14 Score=122.06 Aligned_cols=216 Identities=15% Similarity=0.047 Sum_probs=134.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhhhC-------CCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDCIQ-------GST 88 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~~~-------~~d 88 (325)
++++||||+|.||+++++.|++.|++|++.+|+..+....... ........+|+.+.+.+.++++ ++|
T Consensus 26 K~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD 105 (294)
T d1w6ua_ 26 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGHPN 105 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccccc
Confidence 6899999999999999999999999999999987553322110 1111234578888887765542 689
Q ss_pred EEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHH----hcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCC
Q 020476 89 AVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLI----NESPEGVRPSVLVSATALGYYGTSETEVFDESSPSG 161 (325)
Q Consensus 89 ~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~----~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~ 161 (325)
++||+||.... ...........+.+|......+...+ .. ......++.+|+... ... .+..
T Consensus 106 ilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~-~~~~~~i~~~ss~~~--~~~---------~~~~ 173 (294)
T d1w6ua_ 106 IVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIK-AQKGAAFLSITTIYA--ETG---------SGFV 173 (294)
T ss_dssp EEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEECCTHH--HHC---------CTTC
T ss_pred hhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhccccc-ccccccccccccchh--hhc---------cccc
Confidence 99999997533 23334556677778877755554332 22 133345555555443 111 1223
Q ss_pred Cch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcc-cch-HHHHHHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 162 NDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGAL-AKM-IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 162 ~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
..| .+|...+.....+..+ .|+++..|.||.|..+..... ... ..........|++ -+...+|+|.++
T Consensus 174 ~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~------R~~~pediA~~v 247 (294)
T d1w6ua_ 174 VPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCG------RLGTVEELANLA 247 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTS------SCBCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCC------CCCCHHHHHHHH
Confidence 457 6676666555544443 489999999999976632111 000 1111222223332 266789999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
..++.+.. ..| ++.+.+|.
T Consensus 248 ~fL~sd~s~~itG~~i~vDGG~ 269 (294)
T d1w6ua_ 248 AFLCSDYASWINGAVIKFDGGE 269 (294)
T ss_dssp HHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHhCchhcCCCCcEEEECCCh
Confidence 99997533 344 88888775
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.56 E-value=1.2e-14 Score=120.83 Aligned_cols=217 Identities=16% Similarity=0.086 Sum_probs=132.8
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEe---cCCCccccc-------CCCCCccccCceeecCCchhHhhhC-----C
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLT---RSRSKAELI-------FPGKKTRFFPGVMIAEEPQWRDCIQ-----G 86 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~---r~~~~~~~~-------~~~~~~~~~~~~d~~d~~~~~~~~~-----~ 86 (325)
-||||||++.||+++++.|++.|.+|+.+. |+.+....+ ...........+|+.|.+++.++++ .
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 468999999999999999999998765554 433322111 1111112234689999998877653 5
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHH----HhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDL----INESPEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~----~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+|+++|+|+.... ...+.+.+...+++|+.++.++.++ +++ .+.+++|++||.... .+ .+
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~--~~~G~Iv~isS~~g~-~~----------~~ 150 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKR--RGSGRVLVTGSVGGL-MG----------LP 150 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHH--HTCEEEEEEEEGGGT-SC----------CT
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHH--cCCCceEEEechhhc-CC----------CC
Confidence 8999999997644 3345678888999999987766554 454 456799999998651 11 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc-ccchHHH--------H-HHHcCCCCCCCcceeee
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA-LAKMIPL--------F-MMFAGGPLGSGQQWFSW 225 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~-~~~~~~~--------~-~~~~~~~~~~~~~~~~~ 225 (325)
....| .+|...+.....+..+ .|+++..+.||.|-.+-... ....... . +................
T Consensus 151 ~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (285)
T d1jtva_ 151 FNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAA 230 (285)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhhhcccC
Confidence 34457 6777666655555443 48999999999986542110 0000000 0 00000000000001125
Q ss_pred ccHHHHHHHHHHHHcCCCCCceEEeeC
Q 020476 226 IHLDDIVNLIYEALSNPSYRGVINGTA 252 (325)
Q Consensus 226 v~v~D~a~a~~~~~~~~~~~~~~~~~~ 252 (325)
...+|+|++++.+++.+.+.-.| +.+
T Consensus 231 ~~PeeVA~~v~~~~~~~~p~~ry-~~g 256 (285)
T d1jtva_ 231 QNPEEVAEVFLTALRAPKPTLRY-FTT 256 (285)
T ss_dssp BCHHHHHHHHHHHHHCSSCCSEE-ESC
T ss_pred CCHHHHHHHHHHHHhCCCCCeEE-ecH
Confidence 67899999999999887533344 443
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.56 E-value=7.6e-15 Score=118.75 Aligned_cols=198 Identities=15% Similarity=0.097 Sum_probs=123.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCc-------hhHhhh--CCCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-------QWRDCI--QGSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~-------~~~~~~--~~~d~vi 91 (325)
.|||||||+|.||.+++++|+++|++|++++|++........ ....+..+.+ .+...+ .++|++|
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~li 76 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNI------LVDGNKNWTEQEQSILEQTASSLQGSQVDGVF 76 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSSEEE------ECCTTSCHHHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcccccc------eeccccCchhHHHHHHHHHHHHhcCCCeeEEE
Confidence 489999999999999999999999999999998754221111 1112222111 222222 2589999
Q ss_pred ECCCCCCC---CCCC-hhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HH
Q 020476 92 NLAGTPIG---TRWS-SEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LA 166 (325)
Q Consensus 92 ~~a~~~~~---~~~~-~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~ 166 (325)
||||.... .... .+.++..+++|+.++..+.+++........++|++||... +... +....| .+
T Consensus 77 nnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~--~~~~---------~~~~~Y~as 145 (235)
T d1ooea_ 77 CVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA--MGPT---------PSMIGYGMA 145 (235)
T ss_dssp ECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG--GSCC---------TTBHHHHHH
T ss_pred ECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHh--cCCc---------ccccchHHH
Confidence 99996322 1222 3456678899999887776665543123368999998765 2211 223457 77
Q ss_pred HHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 167 EVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 167 k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
|...+.....+..+ .++++..+.|+.+-.+ +. +... .+ .....++..+|+++.++..+..
T Consensus 146 Kaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~-------~~---~~~~----~~-~~~~~~~~~~~va~~~~~~l~~ 210 (235)
T d1ooea_ 146 KAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTP-------MN---RKWM----PN-ADHSSWTPLSFISEHLLKWTTE 210 (235)
T ss_dssp HHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCH-------HH---HHHS----TT-CCGGGCBCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCc-------ch---hhhC----cC-CccccCCCHHHHHHHHHHHhcC
Confidence 87777777666543 3678888999987533 11 1110 01 1122467899999998866654
Q ss_pred CC---CCc-eEEe
Q 020476 242 PS---YRG-VING 250 (325)
Q Consensus 242 ~~---~~~-~~~~ 250 (325)
+. ..| .+.+
T Consensus 211 ~~~~~~tG~~i~v 223 (235)
T d1ooea_ 211 TSSRPSSGALLKI 223 (235)
T ss_dssp GGGCCCTTCEEEE
T ss_pred ccccCCCceEEEE
Confidence 32 344 4555
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.52 E-value=5.3e-14 Score=115.42 Aligned_cols=205 Identities=12% Similarity=0.013 Sum_probs=132.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHh---CCCeEEEEecCCCcccccCCC------CCccccCceeecCCchhHhhhC-----
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRSKAELIFPG------KKTRFFPGVMIAEEPQWRDCIQ----- 85 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~d~~d~~~~~~~~~----- 85 (325)
.+.++||||++.||.+++++|++ +|++|++.+|+.++....... ........+|+.+++++.++++
T Consensus 6 gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~~ 85 (259)
T d1oaaa_ 6 CAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVREL 85 (259)
T ss_dssp SEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHh
Confidence 35689999999999999999986 699999999987654332210 1111244689999887776642
Q ss_pred ------CCCEEEECCCCCCC------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCC--C--CCCEEEEeeeeeeeecCC
Q 020476 86 ------GSTAVVNLAGTPIG------TRWSSEIKKEIKESRIRVTSKVVDLINESPE--G--VRPSVLVSATALGYYGTS 149 (325)
Q Consensus 86 ------~~d~vi~~a~~~~~------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~--~--~~~~v~~Ss~~v~~~g~~ 149 (325)
..|+++|+||.... ...+.+.++..+++|+.++..+.+++..... + ..++|++||... +..
T Consensus 86 ~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~Iv~isS~~~--~~~- 162 (259)
T d1oaaa_ 86 PRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVVNISSLCA--LQP- 162 (259)
T ss_dssp CCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEEEECCGGG--TSC-
T ss_pred hhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccccccccccc--cCC-
Confidence 35799999986422 2334567888999999999998887765421 1 247899998765 211
Q ss_pred CCceecCCCCCCCch-HHHHHHHHHHHHHhh-cCCceEEEEEeceEEcCCCC------cccchHHHHHHHcCCCCCCCcc
Q 020476 150 ETEVFDESSPSGNDY-LAEVCREWEGTALKV-NKDVRLALIRIGIVLGKDGG------ALAKMIPLFMMFAGGPLGSGQQ 221 (325)
Q Consensus 150 ~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~-~~~~~~~ilRp~~i~g~~~~------~~~~~~~~~~~~~~~~~~~~~~ 221 (325)
.+....| .+|.........+.. ..++++..+.||.|..+... ........+... .+.
T Consensus 163 --------~~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~----- 227 (259)
T d1oaaa_ 163 --------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKL--KSD----- 227 (259)
T ss_dssp --------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHH--HHT-----
T ss_pred --------CccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhc--CCC-----
Confidence 1234557 667666554444433 45899999999988765210 000111111000 011
Q ss_pred eeeeccHHHHHHHHHHHHcCCC
Q 020476 222 WFSWIHLDDIVNLIYEALSNPS 243 (325)
Q Consensus 222 ~~~~v~v~D~a~a~~~~~~~~~ 243 (325)
..+...+|+|++++.++++..
T Consensus 228 -~r~~~p~evA~~i~~ll~~~s 248 (259)
T d1oaaa_ 228 -GALVDCGTSAQKLLGLLQKDT 248 (259)
T ss_dssp -TCSBCHHHHHHHHHHHHHHCC
T ss_pred -CCCCCHHHHHHHHHHHhhhcc
Confidence 125678999999999887543
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.8e-13 Score=111.51 Aligned_cols=212 Identities=15% Similarity=0.137 Sum_probs=132.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC-CccccCceeecCCchhHhh-------hCCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK-KTRFFPGVMIAEEPQWRDC-------IQGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~~~d~~d~~~~~~~-------~~~~d~vi 91 (325)
.+.++||||++.||.+++++|+++|++|++.+|+.+......... .......+++.+.+..++. ....|.++
T Consensus 5 GKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (248)
T d2o23a1 5 GLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVAV 84 (248)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCCcccccccccccccccccccccccccccccccc
Confidence 468999999999999999999999999999999887654332211 0001223444454433322 23679988
Q ss_pred ECCCCCCC---------CCCChhhHHHHHHHhhHHHHHHHHHHhcC--------CCCCCCEEEEeeeeeeeecCCCCcee
Q 020476 92 NLAGTPIG---------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETEVF 154 (325)
Q Consensus 92 ~~a~~~~~---------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~~v~~Ss~~v~~~g~~~~~~~ 154 (325)
++++.... .....+.++..+++|+.++..+.+++... ..+..++|++||... +..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~--~~~------ 156 (248)
T d2o23a1 85 NCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVIINTASVAA--FEG------ 156 (248)
T ss_dssp ECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEECCTHH--HHC------
T ss_pred cccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEEEEecchhh--ccC------
Confidence 88765322 22245678889999999988888776331 013347999999876 221
Q ss_pred cCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCccc-chHHHHHHHcCCCCCCCcceeeeccHH
Q 020476 155 DESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALA-KMIPLFMMFAGGPLGSGQQWFSWIHLD 229 (325)
Q Consensus 155 ~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~v~ 229 (325)
.+....| .+|...+.+...+..+ .|+++..+.||.+..+...... .... ......|+. .-+...+
T Consensus 157 ---~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~--~~~~~~pl~-----~R~g~pe 226 (248)
T d2o23a1 157 ---QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCN--FLASQVPFP-----SRLGDPA 226 (248)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------C--HHHHTCSSS-----CSCBCHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHH--HHHhcCCCC-----CCCcCHH
Confidence 1234567 7777776666555553 4899999999998765321110 1110 111222221 1256889
Q ss_pred HHHHHHHHHHcCCCCCc-eEE
Q 020476 230 DIVNLIYEALSNPSYRG-VIN 249 (325)
Q Consensus 230 D~a~a~~~~~~~~~~~~-~~~ 249 (325)
|+|+++..+++.+-..| +.+
T Consensus 227 evA~~v~fL~s~~~itGq~I~ 247 (248)
T d2o23a1 227 EYAHLVQAIIENPFLNGEVIR 247 (248)
T ss_dssp HHHHHHHHHHHCTTCCSCEEE
T ss_pred HHHHHHHHHHhCCCCCceEeE
Confidence 99999999987654334 443
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.51 E-value=1.3e-14 Score=120.12 Aligned_cols=199 Identities=15% Similarity=0.030 Sum_probs=127.5
Q ss_pred CCeE-EEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhC-------C
Q 020476 20 QMTV-SVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQ-------G 86 (325)
Q Consensus 20 ~~~i-lI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~-------~ 86 (325)
.|+| |||||++.||.+++++|++. |++|++.+|+.++.+... ..........+|+.|.++++++++ +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~ 81 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 81 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence 3566 89999999999999999975 899999999876643221 111112245689999888776543 6
Q ss_pred CCEEEECCCCCCCCCC---ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCc-----------
Q 020476 87 STAVVNLAGTPIGTRW---SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETE----------- 152 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~~---~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~----------- 152 (325)
+|++|||||....... ..+.++..+++|+.++..+.+++........++|.+||.... .+.....
T Consensus 82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~-~~~~~~~~y~~~k~~~~~ 160 (275)
T d1wmaa1 82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSV-RALKSCSPELQQKFRSET 160 (275)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHH-HHHHTSCHHHHHHHHCSS
T ss_pred cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccee-ccccccchhhhhhhcccc
Confidence 8999999998644222 234566788999999999988876532233689999996541 1100000
Q ss_pred --------------------eecCCCCCCCch-HHHHHHHHHHHHHhh-------cCCceEEEEEeceEEcCCCCcccch
Q 020476 153 --------------------VFDESSPSGNDY-LAEVCREWEGTALKV-------NKDVRLALIRIGIVLGKDGGALAKM 204 (325)
Q Consensus 153 --------------------~~~e~~~~~~~y-~~k~~~~~~~~~~~~-------~~~~~~~ilRp~~i~g~~~~~~~~~ 204 (325)
......++...| .+|.........+.. ..++.+..+.||+|-.+-...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v~T~m~~~---- 236 (275)
T d1wmaa1 161 ITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMAGP---- 236 (275)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSBCSTTTCT----
T ss_pred cchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccccCCcccC----
Confidence 001111233457 666655443332221 248999999999886542111
Q ss_pred HHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcC
Q 020476 205 IPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSN 241 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~ 241 (325)
. -....+|.|+.++.+...
T Consensus 237 ---------------~---~~~~pee~A~~~~~~a~~ 255 (275)
T d1wmaa1 237 ---------------K---ATKSPEEGAETPVYLALL 255 (275)
T ss_dssp ---------------T---CSBCHHHHTHHHHHHHSC
T ss_pred ---------------c---ccCCHHHHHHHHHHHHcC
Confidence 0 123578899988887643
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=1.1e-13 Score=113.60 Aligned_cols=220 Identities=14% Similarity=0.070 Sum_probs=135.8
Q ss_pred cCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhh-------CC
Q 020476 19 SQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCI-------QG 86 (325)
Q Consensus 19 ~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~-------~~ 86 (325)
..+++|||||+| .||+++++.|+++|++|++.+|++.......+ ..........|..+..+..+.+ ..
T Consensus 4 ~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (258)
T d1qsga_ 4 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 83 (258)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhcccc
Confidence 357999999998 79999999999999999999998653322111 0000112234444544443332 25
Q ss_pred CCEEEECCCCCCCCC--------CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCC
Q 020476 87 STAVVNLAGTPIGTR--------WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESS 158 (325)
Q Consensus 87 ~d~vi~~a~~~~~~~--------~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~ 158 (325)
.|++||+|+...... ...+........|+.+...+..++.......+.++++||.... .+ .
T Consensus 84 ~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~~-~~----------~ 152 (258)
T d1qsga_ 84 FDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGAE-RA----------I 152 (258)
T ss_dssp EEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT-SB----------C
T ss_pred cceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhhc-cC----------C
Confidence 799999998753322 1223345566788888888888776532333457777876541 11 1
Q ss_pred CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHH
Q 020476 159 PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVN 233 (325)
Q Consensus 159 ~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~ 233 (325)
|....| .+|...+........+ .++++..++||.|..+............ ......|++ -+...+|+|+
T Consensus 153 ~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~------R~~~peeia~ 226 (258)
T d1qsga_ 153 PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIR------RTVTIEDVGN 226 (258)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTS------SCCCHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCC------CCcCHHHHHH
Confidence 234557 6777766555555443 4899999999999876432211111111 222222332 2678999999
Q ss_pred HHHHHHcCCC--CCc-eEEeeCCCC
Q 020476 234 LIYEALSNPS--YRG-VINGTAPNP 255 (325)
Q Consensus 234 a~~~~~~~~~--~~~-~~~~~~~~~ 255 (325)
++..++.+.. .+| ++.+.+|.+
T Consensus 227 ~v~fL~s~~s~~itG~~i~vDGG~~ 251 (258)
T d1qsga_ 227 SAAFLCSDLSAGISGEVVHVDGGFS 251 (258)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHhCchhcCccCceEEECcCHH
Confidence 9999996532 445 787877754
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.47 E-value=5.8e-13 Score=107.99 Aligned_cols=209 Identities=19% Similarity=0.113 Sum_probs=131.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh------CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI------QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~------~~~d~vi~~a 94 (325)
|++|||||++.||+++++.|+++|++|++.+|+.+..+.. ...+|+.+......+. ...+.+++++
T Consensus 2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~--------~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (241)
T d1uaya_ 2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGEDLI--------YVEGDVTREEDVRRAVARAQEEAPLFAVVSAA 73 (241)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSSSSE--------EEECCTTCHHHHHHHHHHHHHHSCEEEEEECC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccccce--------EeeccccchhhhHHHHHhhhccccccchhhhh
Confidence 6899999999999999999999999999999987643321 2234555444333322 2445555555
Q ss_pred CCCCC-------CCCChhhHHHHHHHhhHHHHHHHHHHhcC--------CCCCCCEEEEeeeeeeeecCCCCceecCCCC
Q 020476 95 GTPIG-------TRWSSEIKKEIKESRIRVTSKVVDLINES--------PEGVRPSVLVSATALGYYGTSETEVFDESSP 159 (325)
Q Consensus 95 ~~~~~-------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~--------~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~ 159 (325)
+.... .....+.++..+++|+.+...+...+... ..+..++|++||.... .+ .+
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~-~~----------~~ 142 (241)
T d1uaya_ 74 GVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAF-EG----------QI 142 (241)
T ss_dssp CCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHH-HC----------CT
T ss_pred hccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhc-cC----------CC
Confidence 43211 22345567788899998877766654221 1234589999998651 22 12
Q ss_pred CCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHH
Q 020476 160 SGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNL 234 (325)
Q Consensus 160 ~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a 234 (325)
....| .+|...+.+...+..+ +|+++..+.||.+..+..... ..... ......++. .-+...+|+|.+
T Consensus 143 ~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~--~~~~~~~~~~~~~~~-----~R~g~pedvA~~ 215 (241)
T d1uaya_ 143 GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGL--PEKAKASLAAQVPFP-----PRLGRPEEYAAL 215 (241)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTS--CHHHHHHHHTTCCSS-----CSCCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchh--hhhHHHHHHhcCCCC-----CCCcCHHHHHHH
Confidence 34467 6776666555555543 589999999999875421111 01111 122222221 125678999999
Q ss_pred HHHHHcCCCCCc-eEEeeCCCC
Q 020476 235 IYEALSNPSYRG-VINGTAPNP 255 (325)
Q Consensus 235 ~~~~~~~~~~~~-~~~~~~~~~ 255 (325)
+..+++.....| ++.+.+|-.
T Consensus 216 v~fL~s~~~iTG~~i~VDGG~~ 237 (241)
T d1uaya_ 216 VLHILENPMLNGEVVRLDGALR 237 (241)
T ss_dssp HHHHHHCTTCCSCEEEESTTCC
T ss_pred HHHHHhCCCCCCCEEEECCccc
Confidence 999998655455 788877754
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.44 E-value=2.5e-12 Score=107.53 Aligned_cols=221 Identities=11% Similarity=0.006 Sum_probs=129.8
Q ss_pred hcCCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCc-------------ccccCCCCCc---------------c
Q 020476 18 ASQMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSK-------------AELIFPGKKT---------------R 67 (325)
Q Consensus 18 ~~~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~-------------~~~~~~~~~~---------------~ 67 (325)
...|++|||||+| -||.++++.|+++|.+|++..|++.. .......... .
T Consensus 6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (297)
T d1d7oa_ 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDNP 85 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCSG
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHHHHHhhhhhhhhhhhhhhhhhhhhhhhhhhcccc
Confidence 3457999999987 79999999999999999999885321 0000000000 0
Q ss_pred ccCcee--------ecCCchhHhh-------hCCCCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 68 FFPGVM--------IAEEPQWRDC-------IQGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 68 ~~~~~d--------~~d~~~~~~~-------~~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
.....| ..+.+..+++ +.++|++||+||.... .+.+.+.+...+++|+.+...+.+++..
T Consensus 86 ~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 165 (297)
T d1d7oa_ 86 EDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLP 165 (297)
T ss_dssp GGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred ccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHH
Confidence 000011 1233333322 2378999999986321 3446677889999999999999888765
Q ss_pred CCCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHH----HhhcCCceEEEEEeceEEcCCCCccc
Q 020476 128 SPEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTA----LKVNKDVRLALIRIGIVLGKDGGALA 202 (325)
Q Consensus 128 ~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~----~~~~~~~~~~ilRp~~i~g~~~~~~~ 202 (325)
.....++.+.+++.+. .... .+....| .+|......... +..+.++++..+.||.+..+......
T Consensus 166 ~~~~~g~~~~~~~~~~--~~~~--------~~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~ 235 (297)
T d1d7oa_ 166 IMNPGGASISLTYIAS--ERII--------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIG 235 (297)
T ss_dssp GEEEEEEEEEEECGGG--TSCC--------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCS
T ss_pred HhhcCCcceeeeehhh--cccc--------cccccceecccccccccccccchhccccceEEecccccccccchhhhhcc
Confidence 3222234556665543 1100 1223345 455444333222 22235899999999999877543221
Q ss_pred chHHHH-HHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCC
Q 020476 203 KMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~ 254 (325)
..-... ......|++ .+...+|+|.+++.++.... ..| ++.+.+|.
T Consensus 236 ~~~~~~~~~~~~~Plg------R~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 236 FIDTMIEYSYNNAPIQ------KTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHHHHHHHHSSSC------CCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred CCHHHHHHHHhCCCCC------CCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 111111 122222333 26789999999999996533 344 77777774
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.42 E-value=3.7e-13 Score=110.84 Aligned_cols=199 Identities=14% Similarity=0.060 Sum_probs=126.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC-----CCccccCceeecCCchhHhh-------hCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG-----KKTRFFPGVMIAEEPQWRDC-------IQG 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-----~~~~~~~~~d~~d~~~~~~~-------~~~ 86 (325)
..++++||||++.||.+++++|+++|++|++++|+.++....... ........+|..+.+..... ...
T Consensus 13 ~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~ 92 (269)
T d1xu9a_ 13 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 92 (269)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhCC
Confidence 347999999999999999999999999999999987654332211 00011222344444444332 236
Q ss_pred CCEEEECCCCCCC---CCCChhhHHHHHHHhhHHHHHHHHHHhcC-CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCC
Q 020476 87 STAVVNLAGTPIG---TRWSSEIKKEIKESRIRVTSKVVDLINES-PEGVRPSVLVSATALGYYGTSETEVFDESSPSGN 162 (325)
Q Consensus 87 ~d~vi~~a~~~~~---~~~~~~~~~~~~~~nv~~~~~ll~~~~~~-~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~ 162 (325)
.|+++++|+.... .....+.....+++|+.++..+.+++... ..+.+++|++||.... .+ .|...
T Consensus 93 ~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~-~~----------~p~~~ 161 (269)
T d1xu9a_ 93 LDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK-VA----------YPMVA 161 (269)
T ss_dssp CSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT-SC----------CTTCH
T ss_pred ccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc-CC----------CCCch
Confidence 8999999987544 33456677788999998876665554321 1134689999998751 22 12344
Q ss_pred ch-HHHHHHHHHHHHHhhc-----CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHH
Q 020476 163 DY-LAEVCREWEGTALKVN-----KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIY 236 (325)
Q Consensus 163 ~y-~~k~~~~~~~~~~~~~-----~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~ 236 (325)
.| .+|...+.....+..+ .++++..+.||.|-.+ +.. +.. .+.........+++|+.++
T Consensus 162 ~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~-------~~~--~~~------~~~~~~~~~~~e~~a~~i~ 226 (269)
T d1xu9a_ 162 AYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTE-------TAM--KAV------SGIVHMQAAPKEECALEII 226 (269)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCH-------HHH--HHS------CGGGGGGCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCc-------HHH--Hhc------cCCccccCCCHHHHHHHHH
Confidence 67 6777666555544432 4688999999987543 111 111 1111223566889999998
Q ss_pred HHHcCCC
Q 020476 237 EALSNPS 243 (325)
Q Consensus 237 ~~~~~~~ 243 (325)
..+....
T Consensus 227 ~~~~~~~ 233 (269)
T d1xu9a_ 227 KGGALRQ 233 (269)
T ss_dssp HHHHTTC
T ss_pred HHhhcCC
Confidence 8776554
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.41 E-value=1.3e-12 Score=108.09 Aligned_cols=218 Identities=14% Similarity=0.055 Sum_probs=122.5
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcccccC---CCCCccccCceeecCCchhHhhh-------CCC
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKAELIF---PGKKTRFFPGVMIAEEPQWRDCI-------QGS 87 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~---~~~~~~~~~~~d~~d~~~~~~~~-------~~~ 87 (325)
.|++|||||+| .||.++++.|+++|++|++.+|++...+... ..........+|+.+.+.+.+++ ..+
T Consensus 5 gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g~i 84 (274)
T d2pd4a1 5 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGSL 84 (274)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSCE
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcCCC
Confidence 57999999987 7999999999999999999999864332221 11111123456777766655544 378
Q ss_pred CEEEECCCCCCCC----CCChhhHHH---HHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCCCCC
Q 020476 88 TAVVNLAGTPIGT----RWSSEIKKE---IKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDESSPS 160 (325)
Q Consensus 88 d~vi~~a~~~~~~----~~~~~~~~~---~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~ 160 (325)
|++||+++..... ......... ....+.............. .+....|+++|+... .+. .+.
T Consensus 85 d~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~~-~~~---------~~~ 153 (274)
T d2pd4a1 85 DFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPL-LNNGASVLTLSYLGS-TKY---------MAH 153 (274)
T ss_dssp EEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECGGG-TSB---------CTT
T ss_pred CeEEeecccccccccccccccccchhhhhhhccccccccccccccccc-cccCcceeeeccccc-ccc---------ccc
Confidence 9999999975331 111112222 2223333444444444332 222333443333221 111 112
Q ss_pred CCch-HHHHHHHHHHHHHhh---cCCceEEEEEeceEEcCCCCcccchHHHH-HHHcCCCCCCCcceeeeccHHHHHHHH
Q 020476 161 GNDY-LAEVCREWEGTALKV---NKDVRLALIRIGIVLGKDGGALAKMIPLF-MMFAGGPLGSGQQWFSWIHLDDIVNLI 235 (325)
Q Consensus 161 ~~~y-~~k~~~~~~~~~~~~---~~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~v~D~a~a~ 235 (325)
...| .+|............ ..|+++..+.||.+..+........-... ......|. .-+...+|+|.++
T Consensus 154 ~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~------~r~~~pedIA~~v 227 (274)
T d2pd4a1 154 YNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPL------RKNVSLEEVGNAG 227 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTT------SSCCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhc------cCCcCHHHHHHHH
Confidence 2345 456555444433333 35899999999998876432211111111 11111222 2367899999999
Q ss_pred HHHHcCCC--CCc-eEEeeCCC
Q 020476 236 YEALSNPS--YRG-VINGTAPN 254 (325)
Q Consensus 236 ~~~~~~~~--~~~-~~~~~~~~ 254 (325)
..++.+.. .+| ++.+.+|.
T Consensus 228 ~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 228 MYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp HHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhChhhCCCcCceEEECCCh
Confidence 99997543 344 88888875
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.40 E-value=9.5e-12 Score=103.23 Aligned_cols=219 Identities=11% Similarity=0.033 Sum_probs=127.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc-cccC-------CC---------------CCccccCceeecC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA-ELIF-------PG---------------KKTRFFPGVMIAE 76 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~-------~~---------------~~~~~~~~~d~~d 76 (325)
++-++||||++.||+++++.|++.|++|++.+|+.... ..+. .. ........+|+.+
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 45789999999999999999999999999988764321 1100 00 0000012356667
Q ss_pred CchhHhhh-------CCCCEEEECCCCCCCCCCCh-----------------hhHHHHHHHhhHHHHHHHHHHhcC----
Q 020476 77 EPQWRDCI-------QGSTAVVNLAGTPIGTRWSS-----------------EIKKEIKESRIRVTSKVVDLINES---- 128 (325)
Q Consensus 77 ~~~~~~~~-------~~~d~vi~~a~~~~~~~~~~-----------------~~~~~~~~~nv~~~~~ll~~~~~~---- 128 (325)
.+++.+++ .++|++|||||......... ......+.+|+.+...+.+++.+.
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 77666654 37999999999754322211 112235778888887777654320
Q ss_pred ----CCCCCCEEEEeeeeeeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCc
Q 020476 129 ----PEGVRPSVLVSATALGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGA 200 (325)
Q Consensus 129 ----~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~ 200 (325)
..+..+++.++|... .. ..+....| .+|.........+..+ .|+++..+.||.+-......
T Consensus 162 ~~~~~~~~~~ii~~~s~~~--~~---------~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~ 230 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMT--NQ---------PLLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMP 230 (284)
T ss_dssp CGGGSCSCEEEEEECCTTT--TS---------CCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSC
T ss_pred HHHhcCCCCcccccccccc--cC---------CccceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCC
Confidence 022234555555433 11 11223457 6676666555555443 48999999999643221111
Q ss_pred ccchHHHHHHHcCCCCCCCcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCCCC
Q 020476 201 LAKMIPLFMMFAGGPLGSGQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPVR 257 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~s 257 (325)
..... ......|+. .-+...+|+|++++.++.... ..| ++.+.+|.+++
T Consensus 231 -~~~~~--~~~~~~pl~-----~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~sl~ 282 (284)
T d1e7wa_ 231 -PAVWE--GHRSKVPLY-----QRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGYSLT 282 (284)
T ss_dssp -HHHHH--HHHTTCTTT-----TSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGGC
T ss_pred -HHHHH--HHHhcCCCC-----CCCCCHHHHHHHHHHHhCchhcCccCCeEEECcChhcc
Confidence 11111 222222221 125689999999999986543 344 88888886554
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.28 E-value=2.1e-11 Score=100.16 Aligned_cols=220 Identities=13% Similarity=0.016 Sum_probs=128.5
Q ss_pred CCeEEEECCCc--hHHHHHHHHHHhCCCeEEEEecCCCcc-cccCCC-CCccccCceeecCCchhHhhh----------C
Q 020476 20 QMTVSVTGATG--FIGRRLVQRLQADNHQVRVLTRSRSKA-ELIFPG-KKTRFFPGVMIAEEPQWRDCI----------Q 85 (325)
Q Consensus 20 ~~~ilI~GatG--~iG~~l~~~L~~~g~~V~~~~r~~~~~-~~~~~~-~~~~~~~~~d~~d~~~~~~~~----------~ 85 (325)
.|++|||||+| .||.+++++|++.|.+|++..|+..+. +...+. ........+|+.+.++..+++ .
T Consensus 6 gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~~~ 85 (268)
T d2h7ma1 6 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAGN 85 (268)
T ss_dssp TCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTTC
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccccCC
Confidence 46899999765 599999999999999999999987553 212111 111123457888776444332 2
Q ss_pred CCCEEEECCCCCCC--------CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeeeeeecCCCCceecCC
Q 020476 86 GSTAVVNLAGTPIG--------TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATALGYYGTSETEVFDES 157 (325)
Q Consensus 86 ~~d~vi~~a~~~~~--------~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~~~e~ 157 (325)
..|+++|+|+.... .+.........+..|.............. ......++++|... ...
T Consensus 86 ~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~~~--~~~--------- 153 (268)
T d2h7ma1 86 KLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPI-MNPGGSIVGMDFDP--SRA--------- 153 (268)
T ss_dssp CEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG-EEEEEEEEEEECCC--SSC---------
T ss_pred CcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhh-cccccccccccccc--ccc---------
Confidence 47999999986422 12233455566677777777776666553 12223444444332 111
Q ss_pred CCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCC------Ccc---cchHHHH--HHHcCCCCCCCcce
Q 020476 158 SPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDG------GAL---AKMIPLF--MMFAGGPLGSGQQW 222 (325)
Q Consensus 158 ~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~------~~~---~~~~~~~--~~~~~~~~~~~~~~ 222 (325)
.|....| .+|...+.....+..+ .++++..|.||.+-.+.. ... ....... ......|++
T Consensus 154 ~p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~----- 228 (268)
T d2h7ma1 154 MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGWDQRAPIG----- 228 (268)
T ss_dssp CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHHHHHCTTC-----
T ss_pred CcccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHHHhcCCCC-----
Confidence 1223346 5666555554444442 489999999998875410 000 0001111 111111221
Q ss_pred eeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCCC
Q 020476 223 FSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 223 ~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~ 256 (325)
+.+...+|+|+++..++.+.. ..| ++.+.+|...
T Consensus 229 rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~~ 265 (268)
T d2h7ma1 229 WNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAHT 265 (268)
T ss_dssp CCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGGG
T ss_pred CCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCccc
Confidence 236778999999999996533 344 7888877543
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.27 E-value=1.3e-10 Score=95.29 Aligned_cols=217 Identities=15% Similarity=0.067 Sum_probs=122.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-cCC----C-CCccccCceeecC----CchhHhh-------
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFP----G-KKTRFFPGVMIAE----EPQWRDC------- 83 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~----~-~~~~~~~~~d~~d----~~~~~~~------- 83 (325)
+..|||||++.||.++++.|+++|++|++.+|+.++..+ +.. . .........+..+ .+.+.++
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRA 81 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHH
Confidence 468999999999999999999999999999998754311 110 0 0000011122222 2222222
Q ss_pred hCCCCEEEECCCCCCCCCC--------------ChhhHHHHHHHhhHHHHHHHHHHhcCC-------CCCCCEEEEeeee
Q 020476 84 IQGSTAVVNLAGTPIGTRW--------------SSEIKKEIKESRIRVTSKVVDLINESP-------EGVRPSVLVSATA 142 (325)
Q Consensus 84 ~~~~d~vi~~a~~~~~~~~--------------~~~~~~~~~~~nv~~~~~ll~~~~~~~-------~~~~~~v~~Ss~~ 142 (325)
+.++|++||+||....... ...........|+.............. .....++.+|+..
T Consensus 82 ~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (266)
T d1mxha_ 82 FGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRSRNLSVVNLCDAM 161 (266)
T ss_dssp HSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------CCCEEEEEECCGG
T ss_pred hCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhccccccccccccccccchhhhhcc
Confidence 2379999999997533221 122334455566666555544443310 1112233333332
Q ss_pred eeeecCCCCceecCCCCCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHHHHHcCCCCCC
Q 020476 143 LGYYGTSETEVFDESSPSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLFMMFAGGPLGS 218 (325)
Q Consensus 143 v~~~g~~~~~~~~e~~~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~~~~~~~~~~~ 218 (325)
. . ...+....| .+|...+........+ .|+++..+.||.+..+.... ..... ......|++
T Consensus 162 ~--~---------~~~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~-~~~~~--~~~~~~pl~- 226 (266)
T d1mxha_ 162 T--D---------LPLPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMP-QETQE--EYRRKVPLG- 226 (266)
T ss_dssp G--G---------SCCTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSC-HHHHH--HHHTTCTTT-
T ss_pred c--c---------ccCcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCC-HHHHH--HHHhcCCCC-
Confidence 2 1 112233456 5777666555555443 58999999999987653221 11111 222223332
Q ss_pred CcceeeeccHHHHHHHHHHHHcCCC--CCc-eEEeeCCCCC
Q 020476 219 GQQWFSWIHLDDIVNLIYEALSNPS--YRG-VINGTAPNPV 256 (325)
Q Consensus 219 ~~~~~~~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~~~~ 256 (325)
+-+...+|+|++++.++.+.. ..| ++.+.+|..+
T Consensus 227 ----r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~~l 263 (266)
T d1mxha_ 227 ----QSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGLIL 263 (266)
T ss_dssp ----SCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred ----CCCCCHHHHHHHHHHHhCchhCCccCCeEEECccHhh
Confidence 224679999999999997643 345 8888887544
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.24 E-value=5.5e-11 Score=97.03 Aligned_cols=209 Identities=14% Similarity=0.087 Sum_probs=112.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhH--------hhhCCCCEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR--------DCIQGSTAVV 91 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~--------~~~~~~d~vi 91 (325)
||.|+||||++.||++++++|++.|++|++++|+..+.. .|+.+.+... +.....|+++
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~~~-------------~d~~~~~~~~~~~~~~~~~~~~~id~lv 67 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-------------ADLSTAEGRKQAIADVLAKCSKGMDGLV 67 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-------------CCTTSHHHHHHHHHHHHTTCTTCCSEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHHHH-------------HHhcCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 567899999999999999999999999999999764322 2333222211 1223689999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHH----HHhcCCCCCCCEEEEeeeeeeeecCCCCce--------------
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVD----LINESPEGVRPSVLVSATALGYYGTSETEV-------------- 153 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~----~~~~~~~~~~~~v~~Ss~~v~~~g~~~~~~-------------- 153 (325)
++|+.... .+.......+|..+...+.+ ...+ ........+++.............
T Consensus 68 ~~Ag~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~s 141 (257)
T d1fjha_ 68 LCAGLGPQ----TKVLGNVVSVNYFGATELMDAFLPALKK--GHQPAAVVISSVASAHLAFDKNPLALALEAGEEAKARA 141 (257)
T ss_dssp ECCCCCTT----CSSHHHHHHHHTHHHHHHHHHHHHHHHT--SSSCEEEEECCGGGGSSCGGGCTTHHHHHHTCHHHHHH
T ss_pred EcCCCCCc----HHHHHHHHHHHHHHHHHHHHHhhhhhhh--hccCcceeeeeccccchhhhhhhhhhhccCCcEEEEee
Confidence 99986422 22344555667766555544 3344 333445555543321010000000
Q ss_pred ecCCC---CCCCch-HHHHHHHHHHHHHhhc---CCceEEEEEeceEEcCCCCcccchHHHH-HHHc-CCCCCCCcceee
Q 020476 154 FDESS---PSGNDY-LAEVCREWEGTALKVN---KDVRLALIRIGIVLGKDGGALAKMIPLF-MMFA-GGPLGSGQQWFS 224 (325)
Q Consensus 154 ~~e~~---~~~~~y-~~k~~~~~~~~~~~~~---~~~~~~ilRp~~i~g~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~ 224 (325)
..... +....| .+|...+.+...+..+ .|+++..+.||.+-.+.......--... ...+ ..|+ .-
T Consensus 142 ~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~Pl------gR 215 (257)
T d1fjha_ 142 IVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM------GR 215 (257)
T ss_dssp HHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST------TS
T ss_pred ehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhcCCCC------CC
Confidence 00000 011246 6676666555555443 5899999999999765311100000000 0011 0122 12
Q ss_pred eccHHHHHHHHHHHHcCCC--CCc-eEEeeCC
Q 020476 225 WIHLDDIVNLIYEALSNPS--YRG-VINGTAP 253 (325)
Q Consensus 225 ~v~v~D~a~a~~~~~~~~~--~~~-~~~~~~~ 253 (325)
+...+|+|+++..++.... ..| ++.+.+|
T Consensus 216 ~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 216 RAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp CCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 5678999999999986543 344 7777766
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.20 E-value=3.6e-10 Score=95.35 Aligned_cols=164 Identities=12% Similarity=0.022 Sum_probs=105.1
Q ss_pred CeEEEEC--CCchHHHHHHHHHHhCCCeEEEEecCCCccc------------c-cCCCCC---c----------------
Q 020476 21 MTVSVTG--ATGFIGRRLVQRLQADNHQVRVLTRSRSKAE------------L-IFPGKK---T---------------- 66 (325)
Q Consensus 21 ~~ilI~G--atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~------------~-~~~~~~---~---------------- 66 (325)
+..|||| ++.-||.++++.|+++|.+|++..++..... . ...... .
T Consensus 3 kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (329)
T d1uh5a_ 3 DICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTANDI 82 (329)
T ss_dssp CEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHTTTTTGGGEETTTEECCEEEEEECCTTCSSGGGC
T ss_pred cEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHHHHHhhhhHHHHHHHhhhhhhhcccccceehhhccc
Confidence 5689999 5569999999999999999999876543110 0 000000 0
Q ss_pred ----cccCceeecCCchhHhhh-------CCCCEEEECCCCCCC-----CCCChhhHHHHHHHhhHHHHHHHHHHhcCCC
Q 020476 67 ----RFFPGVMIAEEPQWRDCI-------QGSTAVVNLAGTPIG-----TRWSSEIKKEIKESRIRVTSKVVDLINESPE 130 (325)
Q Consensus 67 ----~~~~~~d~~d~~~~~~~~-------~~~d~vi~~a~~~~~-----~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~ 130 (325)
.....+|+.+.+.+++++ .++|++||+||.... .+...+.+...+++|+.++..+.+++..+..
T Consensus 83 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~ 162 (329)
T d1uh5a_ 83 DEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMK 162 (329)
T ss_dssp CHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEE
T ss_pred chhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcc
Confidence 000112444555554443 378999999986432 3345677888999999998888888766433
Q ss_pred CCCCEEEEeeeeeeeecCCCCceecCCCCC-CCch-HHHHHHHHHHHHHhhc----CCceEEEEEeceEEc
Q 020476 131 GVRPSVLVSATALGYYGTSETEVFDESSPS-GNDY-LAEVCREWEGTALKVN----KDVRLALIRIGIVLG 195 (325)
Q Consensus 131 ~~~~~v~~Ss~~v~~~g~~~~~~~~e~~~~-~~~y-~~k~~~~~~~~~~~~~----~~~~~~ilRp~~i~g 195 (325)
..+++|.+||.+. ... .|. ...| .+|...+.+...+..+ +|+++..|.||.|-.
T Consensus 163 ~~GsIv~iss~~~--~~~---------~p~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T 222 (329)
T d1uh5a_ 163 PQSSIISLTYHAS--QKV---------VPGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKS 222 (329)
T ss_dssp EEEEEEEEECGGG--TSC---------CTTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCC
T ss_pred cccccccceeehh--ccc---------ccccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccc
Confidence 3467888887665 111 111 2345 5676666555544432 489999999998754
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.08 E-value=1.6e-11 Score=95.43 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=63.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCC---CccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGK---KTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
...++|+||||+|.||+.+++.|+++|.+|++++|+.++........ .......+|+.|.+++.+++.++|+|||+|
T Consensus 21 l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDilin~A 100 (191)
T d1luaa1 21 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG 100 (191)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeeeecC
Confidence 34679999999999999999999999999999999976643322110 000133578889999999999999999999
Q ss_pred CCC
Q 020476 95 GTP 97 (325)
Q Consensus 95 ~~~ 97 (325)
|..
T Consensus 101 g~g 103 (191)
T d1luaa1 101 AIG 103 (191)
T ss_dssp CTT
T ss_pred ccc
Confidence 864
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.74 E-value=1.9e-08 Score=73.29 Aligned_cols=114 Identities=16% Similarity=0.179 Sum_probs=78.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTPIG 99 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~~~ 99 (325)
||.|+||+|.+|+.++..|..+|. ++..++.++.+.....-.-.......-.........+.++++|+||..||.+..
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~aDivVitag~~~~ 81 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLPDCLKGCDVVVIPAGVPRK 81 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHHHHHTTCSEEEECCSCCCC
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHHHhhhhhhcCCCeEEcCCChHHHhCCCCEEEECCCcCCC
Confidence 899999999999999999988874 799998865443221110000001112234566777888999999999996522
Q ss_pred CCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEee
Q 020476 100 TRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSA 140 (325)
Q Consensus 100 ~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss 140 (325)
...+..+....|+...+.+++.+.+ .+...++.+-|
T Consensus 82 ---~g~sR~~ll~~N~~i~~~i~~~i~~--~~p~~iiivvt 117 (144)
T d1mlda1 82 ---PGMTRDDLFNTNATIVATLTAACAQ--HCPDAMICIIS 117 (144)
T ss_dssp ---TTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEECS
T ss_pred ---CCCCcchHHHHHHHHHHHHHHHHHh--cCCCeEEEEec
Confidence 2234567788999999999999999 45455555543
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.56 E-value=3.2e-07 Score=66.72 Aligned_cols=103 Identities=20% Similarity=0.267 Sum_probs=70.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcc--cc----cCCCCCccccCceeec-CCchhHhhhCCCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKA--EL----IFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~--~~----~~~~~~~~~~~~~d~~-d~~~~~~~~~~~d~vi 91 (325)
|||.|+||+|.+|+.++..|+.++ .++..+++++... +. +..... ......++. ..+...+.++++|+||
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~~-~~~~~~~~~~~~~~d~~~l~~aDvVV 79 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDALA-GTRSDANIYVESDENLRIIDESDVVI 79 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHHT-TSCCCCEEEEEETTCGGGGTTCSEEE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhccc-ccccCCccccCCcchHHHhccceEEE
Confidence 799999999999999999999888 4899999875321 10 110000 001112221 1122235678999999
Q ss_pred ECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 92 NLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 92 ~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
-+||.+.. ...+..+....|..-.+.+.+.+.+
T Consensus 80 itAG~~~~---~g~sR~dl~~~Na~iv~~i~~~i~~ 112 (145)
T d1hyea1 80 ITSGVPRK---EGMSRMDLAKTNAKIVGKYAKKIAE 112 (145)
T ss_dssp ECCSCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccC---CCCChhhhhhhhHHHHHHHHHHHhc
Confidence 99997522 2335678888999999999999988
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.55 E-value=3.7e-07 Score=66.32 Aligned_cols=70 Identities=16% Similarity=0.210 Sum_probs=43.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-C---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-H---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+||.|+||||++|+.+++.|+++. + +++++.++.......... .......+.... ..++++|++|.+++
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~-----~~~~~~~~~~~~-~~~~~~DivF~a~~ 74 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFG-----GTTGTLQDAFDL-EALKALDIIVTCQG 74 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGG-----TCCCBCEETTCH-HHHHTCSEEEECSC
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccccc-----CCceeeecccch-hhhhcCcEEEEecC
Confidence 5699999999999999999888763 3 677776655443222111 001111111111 23578999999985
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.52 E-value=1.3e-07 Score=68.91 Aligned_cols=101 Identities=16% Similarity=0.177 Sum_probs=67.9
Q ss_pred CeEEEECCCchHHHHHHHHHH-hC--CCeEEEEecCCCccc---ccCCCCCccccCcee-ecCCchhHhhhCCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQ-AD--NHQVRVLTRSRSKAE---LIFPGKKTRFFPGVM-IAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~-~~--g~~V~~~~r~~~~~~---~~~~~~~~~~~~~~d-~~d~~~~~~~~~~~d~vi~~ 93 (325)
|||.|+|++|.+|++++-.|. +. ..++..++..+.... .+..... ..... +...+.. +.++++|+||.+
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~Dl~h~~~---~~~~~~~~~~~~~-~~~~~aDvvvit 76 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAVDLSHIPT---AVKIKGFSGEDAT-PALEGADVVLIS 76 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHHHHHTSCS---SCEEEEECSSCCH-HHHTTCSEEEEC
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHHHHHCCcc---ccCCcEEEcCCCc-cccCCCCEEEEC
Confidence 799999999999999998775 33 368999987542211 1111110 11112 2233344 468899999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||.+.. ...+..+....|..-.+.+.+.+.+.
T Consensus 77 aG~~~k---~g~~R~dl~~~N~~i~~~v~~~i~~~ 108 (145)
T d2cmda1 77 AGVRRK---PGMDRSDLFNVNAGIVKNLVQQVAKT 108 (145)
T ss_dssp CSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHHH
T ss_pred CCccCC---CCcchhhHHHHHHHHHHHHHHHHHhh
Confidence 997532 22345577789999999999999984
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.41 E-value=1.5e-07 Score=68.66 Aligned_cols=110 Identities=15% Similarity=0.241 Sum_probs=68.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
.|||.|+|+ |++|..++..|+.+| .+|.++++++...+... .... ..... .+. ..+. +.++++|+|+.+
T Consensus 5 ~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~-~~~~~-~~~-~~d~-~~~~~adivvit 79 (146)
T d1ez4a1 5 HQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA-FTAPK-KIY-SGEY-SDCKDADLVVIT 79 (146)
T ss_dssp BCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG-GSCCC-EEE-ECCG-GGGTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc-ccCCc-eEe-eccH-HHhccccEEEEe
Confidence 579999995 999999999999887 58999998764322110 0000 00111 111 1122 346899999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
||.+.. ......+....|+...+.+.+.+.+ .+.+.++.+-
T Consensus 80 ag~~~~---~g~~r~~l~~~N~~i~~~~~~~i~~--~~p~aivivv 120 (146)
T d1ez4a1 80 AGAPQK---PGESRLDLVNKNLNILSSIVKPVVD--SGFDGIFLVA 120 (146)
T ss_dssp CCC-------------CHHHHHHHHHHHHHHHHH--TTCCSEEEEC
T ss_pred cccccC---CCCCHHHHHHHHHHHHHHHHHHHhh--cCCCcEEEEe
Confidence 986522 2344567778999999999999998 4555555543
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.39 E-value=2.9e-07 Score=66.26 Aligned_cols=73 Identities=14% Similarity=0.242 Sum_probs=56.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|+|+|+|+ |.+|+.+++.|.+.|++|++++++++.......... ......|..|++.+.++ ++++|+++-+..
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~-~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~ 74 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEID-ALVINGDCTKIKTLEDAGIEDADMYIAVTG 74 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCS-SEEEESCTTSHHHHHHTTTTTCSEEEECCS
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhh-hhhccCcccchhhhhhcChhhhhhhcccCC
Confidence 79999996 999999999999999999999998876544322111 01334577888888877 578999998754
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=98.33 E-value=1.2e-06 Score=65.50 Aligned_cols=72 Identities=15% Similarity=0.074 Sum_probs=49.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||+|+|+ |.+|+.++..|++.|++|++++|++............ .......-.....+...++|+||.+.-
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~D~iii~vk 72 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVNLVETD--GSIFNESLTANDPDFLATSDLLLVTLK 72 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEEEECTT--SCEEEEEEEESCHHHHHTCSEEEECSC
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhccccCC--ccccccccccchhhhhcccceEEEeec
Confidence 79999997 9999999999999999999999988765443321110 111111111223345568999999864
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.33 E-value=6.9e-07 Score=66.86 Aligned_cols=65 Identities=25% Similarity=0.265 Sum_probs=47.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+| .|.+|+.+++.|.+.|++|++++|+++..+....... +|.. ....+.++++|+||-+.
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~~~~~------~~~~--~~~~~~~~~~DiIilav 65 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQL------VDEA--GQDLSLLQTAKIIFLCT 65 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTS------CSEE--ESCGGGGTTCSEEEECS
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHhhc------ccee--eeecccccccccccccC
Confidence 7999998 5999999999999999999999998765443332211 2211 11224678999999765
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=98.33 E-value=4.2e-06 Score=60.48 Aligned_cols=68 Identities=19% Similarity=0.206 Sum_probs=41.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-C---eEEEEecCCCcccccCCCCCccccCceeecCCc-hhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-H---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP-QWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~-~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|||||+|+.+++.|+++. | ++..++.+....+. .. +..-+....+ .-.+.++++|+||.|..
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~-~~------~~~~~~~~~~~~~~~~~~~~DvvF~alp 73 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPA-PN------FGKDAGMLHDAFDIESLKQLDAVITCQG 73 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBC-CC------SSSCCCBCEETTCHHHHTTCSEEEECSC
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEeccccccccc-cc------cCCcceeeecccchhhhccccEEEEecC
Confidence 799999999999999999888753 3 56655544322221 11 1111111111 11234678999999975
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=98.32 E-value=1.9e-06 Score=64.57 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=68.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCC---C----eEEEEecCCCcc--ccc----CCCCCccccCc-eeecCCchhHhhhCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADN---H----QVRVLTRSRSKA--ELI----FPGKKTRFFPG-VMIAEEPQWRDCIQGS 87 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g---~----~V~~~~r~~~~~--~~~----~~~~~~~~~~~-~d~~d~~~~~~~~~~~ 87 (325)
||.|+||+|.||.+++-.|++.+ . .+..++.+.... ... .... +.. -...-.+...+.++++
T Consensus 26 kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~a----~~~~~~~~~~~~~~~~~~~a 101 (175)
T d7mdha1 26 NIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDSL----YPLLREVSIGIDPYEVFEDV 101 (175)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTT----CTTEEEEEEESCHHHHTTTC
T ss_pred EEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhcccc----cccccCccccccchhhccCC
Confidence 79999999999999999888752 1 455555544321 110 1110 111 1222344566788999
Q ss_pred CEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 88 TAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 88 d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
|+||-.+|.+ +-......+....|..-.+.+.+++.++
T Consensus 102 DvVvi~ag~~---rkpg~tR~Dll~~N~~I~k~~~~~i~~~ 139 (175)
T d7mdha1 102 DWALLIGAKP---RGPGMERAALLDINGQIFADQGKALNAV 139 (175)
T ss_dssp SEEEECCCCC---CCTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEeeccC---CCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999975 3344456788889999999999999884
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=98.31 E-value=1.5e-06 Score=62.86 Aligned_cols=107 Identities=17% Similarity=0.209 Sum_probs=68.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
+||.|+|+ |.+|+.++-.|+.++. ++.+++++++..... ..... ......+.. ...+.++++|+|+.+|
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~--~~~~~~~~~--~~~~~~~~adivvita 76 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLP--FMGQMSLYA--GDYSDVKDCDVIVVTA 76 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCC--CTTCEEEC----CGGGGTTCSEEEECC
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcc--cCCCeeEee--CcHHHhCCCceEEEec
Confidence 58999997 9999999999998874 899999887653221 11110 011222222 2234678999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEE
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~ 137 (325)
|.. ....+...+....|+.-.+.+++.+.+ ...+.++.
T Consensus 77 g~~---~~~~~~r~~l~~~N~~i~~~i~~~i~~--~~p~ai~i 114 (142)
T d1y6ja1 77 GAN---RKPGETRLDLAKKNVMIAKEVTQNIMK--YYNHGVIL 114 (142)
T ss_dssp CC---------CHHHHHHHHHHHHHHHHHHHHH--HCCSCEEE
T ss_pred ccc---cCcCcchhHHhhHHHHHHHHHHHHhhc--cCCCceEE
Confidence 964 223445677888999999999999998 34344433
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.29 E-value=2.9e-07 Score=70.01 Aligned_cols=75 Identities=17% Similarity=0.237 Sum_probs=54.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|+|+|| |++|+++++.|.+.||+|++++|+.++...+............+..+.....+.+...|.++.+..
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIP 76 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeecc
Confidence 479999996 999999999999999999999999988766554422111111222244455666788899987753
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=98.27 E-value=1.8e-06 Score=62.60 Aligned_cols=111 Identities=17% Similarity=0.196 Sum_probs=73.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccC-C--CCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF-P--GKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~-~--~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+|| |.+|+.++..|+.++ .++.++++++....... . ...........+...+. .+.++++|+|+.+||
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~~~~~~~~i~~~~~-~~~~~dadvvvitag 78 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTGSND-YADTANSDIVIITAG 78 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEEESC-GGGGTTCSEEEECCS
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccchhcccceEEecCC-HHHhcCCeEEEEEEe
Confidence 79999996 999999999999887 59999998876532211 0 00000011222322222 356789999999999
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
.+.. ......+....|..-.+.+.+.+.+. ..+-++.+
T Consensus 79 ~~~~---~g~~r~~l~~~N~~i~~~i~~~i~~~--~p~aiviv 116 (142)
T d1guza1 79 LPRK---PGMTREDLLMKNAGIVKEVTDNIMKH--SKNPIIIV 116 (142)
T ss_dssp CCCC---TTCCHHHHHHHHHHHHHHHHHHHHHH--CSSCEEEE
T ss_pred cCCC---CCCchHHHHHHHHHHHHHHHHHhhcc--CCCeEEEE
Confidence 7532 22345677889999999999999883 33444443
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.24 E-value=2.6e-06 Score=61.81 Aligned_cols=69 Identities=19% Similarity=0.158 Sum_probs=44.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.|||.|+||||++|..+++.|.+++| ++..+..+.+..+..... .-++.-.+.-...+.++|++|.+++
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~~~-------~~~~~~~~~~~~~~~~~d~vf~a~p 73 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMGFA-------ESSLRVGDVDSFDFSSVGLAFFAAA 73 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEEET-------TEEEECEEGGGCCGGGCSEEEECSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcceeec-------cccchhccchhhhhccceEEEecCC
Confidence 58999999999999999999987654 677766554443332211 1122212222233568999998875
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=98.24 E-value=4.1e-07 Score=67.15 Aligned_cols=106 Identities=17% Similarity=0.214 Sum_probs=66.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC----e---EEEEecCC--CcccccCCCCCccccC-ceeecCCchhHhhhCCCCE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH----Q---VRVLTRSR--SKAELIFPGKKTRFFP-GVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~----~---V~~~~r~~--~~~~~~~~~~~~~~~~-~~d~~d~~~~~~~~~~~d~ 89 (325)
+|||.|+||+|++|++++..|+..+. + ...+.-.. ................ .-.+...+...+.++++|+
T Consensus 4 p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~adv 83 (154)
T d1y7ta1 4 PVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLLAGLEATDDPKVAFKDADY 83 (154)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTEEEEEEESCHHHHTTTCSE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhccccccccccccCCchhhhcccccE
Confidence 46999999999999999999987642 1 12222211 1111100000000011 1123334555678899999
Q ss_pred EEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 90 VVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||.+||.+. ....+..+....|+.-.+.+.+.+.+.
T Consensus 84 ViitaG~~~---~pg~~r~dl~~~N~~i~~~~~~~i~k~ 119 (154)
T d1y7ta1 84 ALLVGAAPR---KAGMERRDLLQVNGKIFTEQGRALAEV 119 (154)
T ss_dssp EEECCCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeecCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999752 234456778889999999999999883
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.16 E-value=1.1e-06 Score=63.59 Aligned_cols=110 Identities=19% Similarity=0.244 Sum_probs=71.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCC-C-CccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPG-K-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
|||.|+|+ |.+|+.++..|+.++ .++..++++++........ . .........+.. +. .+.++++|+|+.+||.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~~~-~~-~~~~~~adivvitag~ 77 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA-GD-YADLKGSDVVIVAAGV 77 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE-CC-GGGGTTCSEEEECCCC
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccccC-Cc-HHHhcCCCEEEEeccc
Confidence 79999996 999999998888776 4899999876543211100 0 000011122221 22 2457899999999997
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
+.. ......+....|..-.+.+.+.+.+. ....++++
T Consensus 78 ~~~---~g~~r~dl~~~N~~I~~~i~~~i~~~--~p~aiviv 114 (140)
T d1a5za1 78 PQK---PGETRLQLLGRNARVMKEIARNVSKY--APDSIVIV 114 (140)
T ss_dssp CCC---SSCCHHHHHHHHHHHHHHHHHHHHHH--CTTCEEEE
T ss_pred ccC---CCcchhhhhccccchHHHHHHHHHhc--CCCcEEEE
Confidence 533 23345677788999999999999984 44445444
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.15 E-value=2.9e-06 Score=62.31 Aligned_cols=117 Identities=14% Similarity=0.128 Sum_probs=74.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCC-cc--ccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKK-TR--FFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~-~~--~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|+|+ |.+|+.++..|...+. ++.+++.+++.......... .. .............++.++++|+|+.+||
T Consensus 7 ~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~~~~~~~adiVvitag 85 (154)
T d1pzga1 7 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSYEAALTGADCVIVTAG 85 (154)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSHHHHHTTCSEEEECCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCchhhhhcCCCeEEEecc
Confidence 469999997 9999999988877774 89999887754322110000 00 0001112233455677899999999998
Q ss_pred CCCCCCC--ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 96 TPIGTRW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 96 ~~~~~~~--~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
....... ......+....|+...+.+++.+.+ .+..-++.+-
T Consensus 86 ~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~--~~p~aiviiv 129 (154)
T d1pzga1 86 LTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKK--YCPKTFIIVV 129 (154)
T ss_dssp CSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEEEEC
T ss_pred cccCCCCCCcccchhhhhhhhHHHHHHHHHHHHh--cCCCcEEEEe
Confidence 6522111 1124456777899999999999998 4444554443
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.14 E-value=3.3e-06 Score=61.01 Aligned_cols=111 Identities=14% Similarity=0.155 Sum_probs=73.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|+ |.+|..++-.|+.+| .++.+++++++...... .... .......+....+. +.++++|+|+-.|
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~-~~~~~~~i~~~~d~-~~~~~adiVvita 77 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKYPKIVGGADY-SLLKGSEIIVVTA 77 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-TTTCCCEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhcc-ccCCCCccccCCCH-HHhccccEEEEec
Confidence 79999996 999999999888777 48999998765532110 0000 00011122222233 5778999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
|.+.. ......+....|..-...+.+.+.+ .+...++++-
T Consensus 78 g~~~~---~g~~r~~l~~~n~~i~~~i~~~i~~--~~p~aivivv 117 (142)
T d1ojua1 78 GLARK---PGMTRLDLAHKNAGIIKDIAKKIVE--NAPESKILVV 117 (142)
T ss_dssp CCCCC---SSCCHHHHHHHHHHHHHHHHHHHHT--TSTTCEEEEC
T ss_pred cccCC---CCCchHHHHHHhhHHHHHHHHHHHh--hCCCcEEEEe
Confidence 96532 2334667778899999999999998 4444444433
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=98.11 E-value=8.3e-06 Score=59.84 Aligned_cols=41 Identities=17% Similarity=0.335 Sum_probs=36.3
Q ss_pred hhhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 16 LQASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 16 ~~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
|...++||.|+||.|.+|+.+++.|.+.||+|.+++|+...
T Consensus 5 ~~~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 5 INSDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 45 (152)
T ss_dssp SCTTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred cCCCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence 45567899999999999999999999999999999987643
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.09 E-value=5.2e-06 Score=64.09 Aligned_cols=76 Identities=28% Similarity=0.417 Sum_probs=52.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCc-----------eeecCCchhHhhhCCCCE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPG-----------VMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~-----------~d~~d~~~~~~~~~~~d~ 89 (325)
|||.|+| .||+|..++..|++.|++|++++.+++....+.........+. ..+.-.+++.++++++|+
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~ 79 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV 79 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence 7999998 7999999999999999999999987765444332211000000 111123456677789999
Q ss_pred EEECCCCC
Q 020476 90 VVNLAGTP 97 (325)
Q Consensus 90 vi~~a~~~ 97 (325)
++.|.+-+
T Consensus 80 i~i~VpTP 87 (202)
T d1mv8a2 80 SFICVGTP 87 (202)
T ss_dssp EEECCCCC
T ss_pred EEEecCcc
Confidence 99998754
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=98.08 E-value=7.3e-06 Score=59.15 Aligned_cols=108 Identities=16% Similarity=0.231 Sum_probs=73.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
.||.|+|+ |++|++++..|+.++. ++.++++++...+.. ..... ......+...+.+ +.++++|+||.+|
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~--~~~~~~i~~~~~~-~~~~daDvVVita 77 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSS--FYPTVSIDGSDDP-EICRDADMVVITA 77 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGG--GSTTCEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccc--cCCCceeecCCCH-HHhhCCcEEEEec
Confidence 48999996 9999999999998874 899999877543211 11100 0112233333344 4578999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEE
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVL 137 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~ 137 (325)
|.+.. ......+....|+.-.+.+...+.+ .+.+.++.
T Consensus 78 G~~~~---~g~~R~dl~~~N~~i~~~i~~~i~~--~~p~ai~i 115 (143)
T d1llda1 78 GPRQK---PGQSRLELVGATVNILKAIMPNLVK--VAPNAIYM 115 (143)
T ss_dssp CCCCC---TTCCHHHHHHHHHHHHHHHHHHHHH--HCTTSEEE
T ss_pred ccccC---CCCchhhhhhhhHHHHHHHHHHHHh--hCCCeEEE
Confidence 97532 2344567888999999999999988 44444443
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=98.07 E-value=9e-06 Score=58.50 Aligned_cols=100 Identities=17% Similarity=0.231 Sum_probs=67.5
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCc--cc----ccCCCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSK--AE----LIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~--~~----~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
||.|+||+|.+|+.++-.|..++. ++..++..... .. .+..... ......+.. ... +.++++|+|+.+
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~~--~~~~~~i~~-~~~-~~~~~aDiVvit 77 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA--YDSNTRVRQ-GGY-EDTAGSDVVVIT 77 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT--TTCCCEEEE-CCG-GGGTTCSEEEEC
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhccc--ccCCceEee-CCH-HHhhhcCEEEEe
Confidence 899999999999999999998874 78888864321 11 0100000 011112221 122 345799999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||.+. ....+..+....|..-.+.+.+.+++.
T Consensus 78 aG~~~---~~g~~R~dl~~~N~~I~~~i~~~i~~~ 109 (142)
T d1o6za1 78 AGIPR---QPGQTRIDLAGDNAPIMEDIQSSLDEH 109 (142)
T ss_dssp CCCCC---CTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ccccc---ccCCchhhHHHHHHHHHHHHHHHHHhc
Confidence 99652 233457788899999999999999994
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.06 E-value=9.7e-07 Score=68.14 Aligned_cols=40 Identities=38% Similarity=0.514 Sum_probs=36.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccccc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELI 60 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~ 60 (325)
|||.|+||+|.+|++|++.|++.||+|++.+|++++.+..
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l 40 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAK 40 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH
Confidence 7999999999999999999999999999999988765443
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.05 E-value=5.6e-06 Score=60.33 Aligned_cols=102 Identities=25% Similarity=0.229 Sum_probs=67.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~ 93 (325)
..||.|+|| |++|+.++..|+..+. ++..++++++...... .... .......+.. .. .+.++++|+||.+
T Consensus 6 ~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~-~~~~~~~~~~-~d-~~~l~daDvvvit 81 (148)
T d1ldna1 6 GARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKV-FAPKPVDIWH-GD-YDDCRDADLVVIC 81 (148)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTT-SSSSCCEEEE-CC-GGGTTTCSEEEEC
T ss_pred CCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCcc-ccCCCeEEEE-CC-HHHhccceeEEEe
Confidence 458999997 9999999999998774 8999998765421110 0000 0011122221 12 2567899999999
Q ss_pred CCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcC
Q 020476 94 AGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 94 a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||.+.. ......+....|+.-.+.+.+.+.++
T Consensus 82 ag~~~~---~~~~R~dl~~~N~~i~~~i~~~i~~~ 113 (148)
T d1ldna1 82 AGANQK---PGETRLDLVDKNIAIFRSIVESVMAS 113 (148)
T ss_dssp CSCCCC---TTTCSGGGHHHHHHHHHHHHHHHHHH
T ss_pred cccccc---cCcchhHHHHHHHHHHHHHHHHHHhh
Confidence 997532 23334566778999999999998884
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.03 E-value=3.7e-06 Score=61.87 Aligned_cols=106 Identities=11% Similarity=0.114 Sum_probs=65.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-------eEEEEecCCCccc--ccCCCCCccccC-ceeecCCchhHhhhCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-------QVRVLTRSRSKAE--LIFPGKKTRFFP-GVMIAEEPQWRDCIQGST 88 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-------~V~~~~r~~~~~~--~~~~~~~~~~~~-~~d~~d~~~~~~~~~~~d 88 (325)
.+|||.|+||+|.+|++++-.|++.+. ++..++.+..... .+.......... ...+.-.+...+.++++|
T Consensus 2 ~p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 81 (154)
T d5mdha1 2 EPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEEIAFKDLD 81 (154)
T ss_dssp CCEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHTCCTTEEEEEEESCHHHHTTTCS
T ss_pred CceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhcccccccccccccCcccccccCCce
Confidence 467999999999999999998886531 3555554433221 110000000011 112222344557789999
Q ss_pred EEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 89 AVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 89 ~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+||-++|.+.. ...+..+.+..|..-.+.+.+.+.+
T Consensus 82 vVVitag~~~~---~g~sr~dll~~N~~i~k~~~~~i~k 117 (154)
T d5mdha1 82 VAILVGSMPRR---DGMERKDLLKANVKIFKCQGAALDK 117 (154)
T ss_dssp EEEECCSCCCC---TTCCTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccCCC---CCCchhHHHHHhHHHHHHHHHHHHh
Confidence 99999997633 2223445678899999999988876
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=98.02 E-value=6.5e-06 Score=61.71 Aligned_cols=69 Identities=10% Similarity=0.035 Sum_probs=46.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+||+|+| .|.+|..+++.|.+.|+ +|++++|+++..+....... .|....+.-.....++|.||.+..
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~~~~~------~~~~~~~~~~~~~~~~dlIila~p 71 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGI------IDEGTTSIAKVEDFSPDFVMLSSP 71 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTS------CSEEESCGGGGGGTCCSEEEECSC
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHHHhhc------chhhhhhhhhhhccccccccccCC
Confidence 56899998 69999999999999985 78889988765444333211 222212222223357899998864
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=98.00 E-value=1.4e-05 Score=57.62 Aligned_cols=111 Identities=14% Similarity=0.180 Sum_probs=67.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccC----CCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIF----PGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~----~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
++||.|+|+ |.+|..++-.|+.++. ++.+++.+++...... .... .......+...... +.++++|+||-+|
T Consensus 1 r~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~-~~~~~~~i~~~~d~-~~~~~advvvita 77 (142)
T d1uxja1 1 RKKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASP-IEGFDVRVTGTNNY-ADTANSDVIVVTS 77 (142)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHH-HHTCCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhcccc-ccCCCCEEEecCcH-HHhcCCCEEEEee
Confidence 369999996 9999999988887764 8999998776432211 0000 00001112212233 3468999999999
Q ss_pred CCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 95 GTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
|.+.. ......+....|+.-.+.+++.+.+ ...+-++.+
T Consensus 78 g~~~~---~~~~r~dl~~~N~~i~~~i~~~i~k--~~p~aiviv 116 (142)
T d1uxja1 78 GAPRK---PGMSREDLIKVNADITRACISQAAP--LSPNAVIIM 116 (142)
T ss_dssp SCC------------CHHHHHHHHHHHHHHHGG--GCTTCEEEE
T ss_pred eccCC---cCcchhHHHhHHHHHHHHHHHHHhc--cCCCceEEE
Confidence 97522 2334556677899999999999998 444444444
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=97.96 E-value=1.4e-05 Score=57.20 Aligned_cols=72 Identities=19% Similarity=0.172 Sum_probs=57.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
|+++|+|+ |.+|+++++.|.+.|++|++++.+++.......... ....+|..+++.+.++ ++++|.||-+.+
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~~~~--~~~~gd~~~~~~l~~a~i~~a~~vi~~~~ 73 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASYAT--HAVIANATEENELLSLGIRNFEYVIVAIG 73 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTTTCS--EEEECCTTCTTHHHHHTGGGCSEEEECCC
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHHhCC--cceeeecccchhhhccCCccccEEEEEcC
Confidence 47899985 999999999999999999999999887666554432 1223577888888876 678999887764
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=97.95 E-value=5.2e-06 Score=62.09 Aligned_cols=74 Identities=14% Similarity=0.151 Sum_probs=44.7
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+||.|+||||++|..|++.|.++. .++..+..+....+....... ......+ .......+..+++|+||.+..
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~~~~p-~~~~~~~-~~~~~~~~~~~~~dvvf~a~p 75 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLEEIFP-STLENSI-LSEFDPEKVSKNCDVLFTALP 75 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHHHHCG-GGCCCCB-CBCCCHHHHHHHCSEEEECCS
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCcccccCc-hhhcccc-ccccCHhHhccccceEEEccc
Confidence 6799999999999999999998875 477776544433322211000 0001111 122233344568999998875
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.92 E-value=4.6e-05 Score=57.40 Aligned_cols=74 Identities=24% Similarity=0.333 Sum_probs=52.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc--ccccCCCCC----ccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK--AELIFPGKK----TRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~--~~~~~~~~~----~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+| +|..|.+++..|.+.|++|+..+|..+. ......... .......++.-.+++.++++++|+||.+.
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ad~Ii~av 79 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKCLENAEVVLLGV 79 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHHHTTCSEEEECS
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHhhhhhhhhhcchhccccccccccHHHHHhccchhhccc
Confidence 7999999 5999999999999999999999986443 111111100 00112234445678888999999999876
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 80 p 80 (180)
T d1txga2 80 S 80 (180)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=97.91 E-value=8.9e-06 Score=61.39 Aligned_cols=76 Identities=20% Similarity=0.228 Sum_probs=43.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCC-C--cccccCCCC-CccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSR-S--KAELIFPGK-KTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~-~--~~~~~~~~~-~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
||||.|+|||||+|..|++.|.++. .++..+.-+. . ..+...... .............+.......++|++|.+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvvf~al 80 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDVRDFSADVDVVFLAT 80 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCGGGTCTTCCEEEECS
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhhhhhhcccceeeccc
Confidence 6799999999999999999999874 5776554322 1 111110000 000001111122333444456899999997
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
+
T Consensus 81 p 81 (179)
T d2g17a1 81 A 81 (179)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.91 E-value=3.9e-06 Score=61.97 Aligned_cols=72 Identities=25% Similarity=0.290 Sum_probs=57.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|||+|+ |-+|..+++.|...|. ++++..|+.++...+... + ++...+.+++.+.+.++|+||.+.+.+
T Consensus 23 ~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~-----~-~~~~~~~~~~~~~l~~~Divi~atss~ 95 (159)
T d1gpja2 23 HDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARD-----L-GGEAVRFDELVDHLARSDVVVSATAAP 95 (159)
T ss_dssp TTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHH-----H-TCEECCGGGHHHHHHTCSEEEECCSSS
T ss_pred ccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHh-----h-hcccccchhHHHHhccCCEEEEecCCC
Confidence 4579999997 9999999999999997 699999987766554432 1 245567778888899999999998754
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=97.90 E-value=1.2e-05 Score=59.02 Aligned_cols=109 Identities=15% Similarity=0.179 Sum_probs=71.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCccccc----CCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAELI----FPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~~----~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
..+||.|+|+ |.+|+.++-.|..+|. ++..++++++..... ..... ............. +.++++|+|+.
T Consensus 19 ~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~--~~~~~~~~~~~d~-~~~~~adiVVi 94 (160)
T d1i0za1 19 PNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSL--FLQTPKIVADKDY-SVTANSKIVVV 94 (160)
T ss_dssp CSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGG--GCCCSEEEECSSG-GGGTTCSEEEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhcccc--ccCCCeEEeccch-hhcccccEEEE
Confidence 3469999996 9999999999999985 899999875443211 11000 0011111122233 45789999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEE
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSV 136 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v 136 (325)
.||.+.. ...+..+....|+...+.+...+++ .+.+-++
T Consensus 95 tAg~~~~---~g~tR~~l~~~N~~i~~~i~~~i~~--~~p~aii 133 (160)
T d1i0za1 95 TAGVRQQ---EGESRLNLVQRNVNVFKFIIPQIVK--YSPDCII 133 (160)
T ss_dssp CCSCCCC---TTCCGGGGHHHHHHHHHHHHHHHHH--HCTTCEE
T ss_pred ecCCccc---cCcchHHHHHHHHHHHHHHHHHHHh--cCCCcEE
Confidence 9997533 2233456777899999999999988 3434443
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=97.88 E-value=8.1e-06 Score=59.16 Aligned_cols=113 Identities=12% Similarity=0.105 Sum_probs=68.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCC-CCCccccC--ceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFP-GKKTRFFP--GVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~-~~~~~~~~--~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+||.|+|+ |++|+.++..|+.+| .++..+++++.+...... ........ ...+.. ... +.++++|+||.+||
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~-~d~-~~l~~adiVVitaG 78 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI-NDW-AALADADVVISTLG 78 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE-SCG-GGGTTCSEEEECCS
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceec-cCH-HHhccccEEEEecc
Confidence 69999995 999999999998876 489999987654321110 00000011 111111 122 45689999999999
Q ss_pred CCCCCC-CChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 96 TPIGTR-WSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 96 ~~~~~~-~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
.+.... .......+....|+.-.+.+.+.+++ .....++.+
T Consensus 79 ~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~--~~p~aiviv 120 (146)
T d1hyha1 79 NIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKE--SGFHGVLVV 120 (146)
T ss_dssp CGGGTC-------CTTHHHHHHHHHHHHHHHHH--TTCCSEEEE
T ss_pred ccccccccCCccHHHHHHHHHHHHHHHHHHHhh--cCCCeEEEE
Confidence 642111 11223345667899999999999998 444455443
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=97.83 E-value=2.5e-05 Score=57.50 Aligned_cols=99 Identities=15% Similarity=0.138 Sum_probs=58.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhC-CCeEEEEe-cCCCcc-cccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLT-RSRSKA-ELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~-r~~~~~-~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+.+||+|.|++|.+|+.+++.+.+. +.++.+.. |...+. ........ .....++.-.+.+..+++.+|+||.+.-
T Consensus 3 s~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~d~~~~~--~~~~~~~~~~~~~~~~~~~~DViIDFs~ 80 (162)
T d1diha1 3 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGSDAGELA--GAGKTGVTVQSSLDAVKDDFDVFIDFTR 80 (162)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSCCTTCSS--SSSCCSCCEESCSTTTTTSCSEEEECSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccchhhhhh--ccccCCceeeccHHHHhcccceEEEecc
Confidence 3579999999999999999988876 55665544 433221 11111100 0111122223345566778999999853
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeee
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATA 142 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~ 142 (325)
..++...++.|.+ .+ .++ .+.|++
T Consensus 81 -------------------p~~~~~~~~~a~~--~~-~~~-ViGTTG 104 (162)
T d1diha1 81 -------------------PEGTLNHLAFCRQ--HG-KGM-VIGTTG 104 (162)
T ss_dssp -------------------HHHHHHHHHHHHH--TT-CEE-EECCCC
T ss_pred -------------------HHHHHHHHHHHHh--cc-cee-EEecCC
Confidence 3445577888888 44 344 444443
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=97.83 E-value=1.1e-05 Score=61.09 Aligned_cols=76 Identities=17% Similarity=0.198 Sum_probs=44.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++||.|+|||||.|+.|++.|.++. .++..+..+............ .....-+..........+.++|+||.+..
T Consensus 4 ~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~Dvvf~alp 80 (183)
T d2cvoa1 4 EEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFP-HLITQDLPNLVAVKDADFSNVDAVFCCLP 80 (183)
T ss_dssp SCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCG-GGTTSCCCCCBCGGGCCGGGCSEEEECCS
T ss_pred CccEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccc-cccccccccchhhhhhhhcccceeeeccc
Confidence 45699999999999999999998875 477666543333222211000 00011111122223344568999998875
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.82 E-value=2.9e-05 Score=56.36 Aligned_cols=115 Identities=12% Similarity=0.160 Sum_probs=71.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCC-CccccC--ceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGK-KTRFFP--GVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~-~~~~~~--~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|+|+ |.+|+.++..|..++ .++.+++++++......... ...... ...+.. ....+.++++|+|+.+|+
T Consensus 3 ~~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~-~~~~~~~~~advvvitag 80 (150)
T d1t2da1 3 KAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG-SNTYDDLAGADVVIVTAG 80 (150)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE-ECCGGGGTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEe-cccccccCCCcEEEEecc
Confidence 459999995 999999998777776 48999998776532211000 000001 111111 223356689999999999
Q ss_pred CCCCCCC--ChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEE
Q 020476 96 TPIGTRW--SSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLV 138 (325)
Q Consensus 96 ~~~~~~~--~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~ 138 (325)
....... ......+....|+...+.+.+.+++ .....++.+
T Consensus 81 ~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~--~~p~aiviv 123 (150)
T d1t2da1 81 FTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKK--NCPNAFIIV 123 (150)
T ss_dssp CSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHH--HCTTSEEEE
T ss_pred cccCCCCCccccchhHHHHHHHHHHHHHHHHHHh--cCCCeEEEE
Confidence 6532111 1223556778999999999999998 344445444
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.82 E-value=1.5e-05 Score=59.69 Aligned_cols=72 Identities=24% Similarity=0.200 Sum_probs=50.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|+|+||+|-+|...++.+...|.+|+++++++++.+....... -..+|..+........+++|+||++.|
T Consensus 29 ~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~lGa---~~~i~~~~~~~~~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 29 EKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLALGA---EEAATYAEVPERAKAWGGLDLVLEVRG 100 (171)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHHTTC---SEEEEGGGHHHHHHHTTSEEEEEECSC
T ss_pred CEEEEEeccccchhhhhhhhccccccccccccccccccccccccc---ceeeehhhhhhhhhccccccccccccc
Confidence 489999999999999999998899999999998766544433221 112232222222223358999999876
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.80 E-value=1.6e-05 Score=60.16 Aligned_cols=74 Identities=12% Similarity=0.025 Sum_probs=50.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cC--cee---ecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FP--GVM---IAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~--~~d---~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|+ |.+|..++..|.++||+|++++|+++............. .+ ... .....++.+.++++|+||-+.
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v 80 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV 80 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence 69999996 999999999999999999999998654333221100000 00 000 111235678889999999985
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
.
T Consensus 81 ~ 81 (184)
T d1bg6a2 81 P 81 (184)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.78 E-value=1.7e-05 Score=58.13 Aligned_cols=65 Identities=17% Similarity=0.211 Sum_probs=48.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|+.+++.|+++|++|++.+|+.++....... .+.+ .+...++++++|+||-|..
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~-------~~~~--~~~~~e~~~~~diIi~~v~ 65 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR-------TVGV--TETSEEDVYSCPVVISAVT 65 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH-------HHTC--EECCHHHHHTSSEEEECSC
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh-------cccc--cccHHHHHhhcCeEEEEec
Confidence 7999998 79999999999999999999998877654332211 1222 1245677889999998864
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.73 E-value=8.6e-06 Score=60.44 Aligned_cols=66 Identities=17% Similarity=0.293 Sum_probs=51.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|+||.++| .|.+|+.+++.|++.||+|++++|++.+........ ........++++.+|+|+-|..
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~~---------~~~~~~~~e~~~~~diii~~v~ 66 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAAG---------ASAARSARDAVQGADVVISMLP 66 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHTT---------CEECSSHHHHHTSCSEEEECCS
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhhh---------ccccchhhhhccccCeeeeccc
Confidence 57999999 799999999999999999999999876654433221 1123456677889999999864
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.71 E-value=6.7e-06 Score=60.33 Aligned_cols=65 Identities=15% Similarity=0.215 Sum_probs=49.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+| +|.+|+++++.|++.|++|++..|+.++...+.... ++.. ..+..++++++|+||-+.
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------g~~~--~~~~~~~~~~~dvIilav 65 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------ALPY--AMSHQDLIDQVDLVILGI 65 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------TCCB--CSSHHHHHHTCSEEEECS
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------ceee--echhhhhhhccceeeeec
Confidence 7999999 799999999999999999999999877655443211 1222 235667788999999875
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.71 E-value=6e-06 Score=61.27 Aligned_cols=65 Identities=12% Similarity=0.221 Sum_probs=51.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|..+++.|++.||+|++++|++++...+.... .. -.+...++++++|+||-|..
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~-------~~--~~~~~~e~~~~~d~ii~~v~ 65 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIAAG-------AE--TASTAKAIAEQCDVIITMLP 65 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTT-------CE--ECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHHhh-------hh--hcccHHHHHhCCCeEEEEcC
Confidence 7999999 799999999999999999999999887655544321 12 12355677788999999864
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.67 E-value=1.1e-05 Score=59.17 Aligned_cols=102 Identities=14% Similarity=0.227 Sum_probs=65.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCCCcccc----cCCCCCccccCceeecCCchhHhhhCCCCEEEE
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSRSKAEL----IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVN 92 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~~~~~~----~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~ 92 (325)
.+.||.|+|+ |.+|..++..|..+|. ++..++++++.... +..... ....-........ +.++++|+||.
T Consensus 18 ~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~--~~~~~~~~~~~d~-~~~~~adivvi 93 (159)
T d2ldxa1 18 SRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSL--FLSTPKIVFGKDY-NVSANSKLVII 93 (159)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTT--TCSCCEEEEESSG-GGGTTEEEEEE
T ss_pred CCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcch--hcCCCeEEeccch-hhhccccEEEE
Confidence 3458999996 9999999999998874 89999987654321 111000 0110011111223 45689999999
Q ss_pred CCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 93 LAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 93 ~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+||.+... .....+....|+...+.++..+.+
T Consensus 94 tag~~~~~---~~~R~dll~~N~~i~~~i~~~i~~ 125 (159)
T d2ldxa1 94 TAGARMVS---GQTRLDLLQRNVAIMKAIVPGVIQ 125 (159)
T ss_dssp CCSCCCCT---TTCSSCTTHHHHHHHHHHTTTHHH
T ss_pred ecccccCC---CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 99975332 223345567888888888888887
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.67 E-value=1.2e-05 Score=60.88 Aligned_cols=73 Identities=16% Similarity=0.087 Sum_probs=53.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.....|.+|++++|++++.+....... ...+|..+.+..++.. +++|+||++.
T Consensus 30 G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~~~~~~~~~Gvd~v~D~v 106 (182)
T d1v3va2 30 GETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQIGF---DAAFNYKTVNSLEEALKKASPDGYDCYFDNV 106 (182)
T ss_dssp SCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSCSCHHHHHHHHCTTCEEEEEESS
T ss_pred CCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHhhhh---hhhcccccccHHHHHHHHhhcCCCceeEEec
Confidence 3589999999999999999998899999999998776544443322 2224444554444332 3799999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 107 G 107 (182)
T d1v3va2 107 G 107 (182)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.65 E-value=3.2e-05 Score=58.91 Aligned_cols=106 Identities=17% Similarity=0.255 Sum_probs=65.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCC--------ccccCc------------eeecCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKK--------TRFFPG------------VMIAEE 77 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------~~~~~~------------~d~~d~ 77 (325)
++-+||.|+|| |.+|+.++..++..|++|++++++++.......... ...... ..+.-.
T Consensus 2 ~~IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~l~~i~~~ 80 (192)
T d1f0ya2 2 IIVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEESLRKVAKKKFAENPKAGDEFVEKTLSTIATS 80 (192)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred ceeEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHHHHHHHHhhhhccchhhHHHHHHHHhhcccc
Confidence 34469999996 999999999999999999999998754321110000 000000 011123
Q ss_pred chhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeeeee
Q 020476 78 PQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSATAL 143 (325)
Q Consensus 78 ~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~~v 143 (325)
.++.++++++|.|+-++.- |...=+.++..+.+ .-....|+.|+++.
T Consensus 81 ~d~~~a~~~ad~ViEav~E-----------------~l~~K~~v~~~l~~--~~~~~~ilasnTS~ 127 (192)
T d1f0ya2 81 TDAASVVHSTDLVVEAIVE-----------------NLKVKNELFKRLDK--FAAEHTIFASNTSS 127 (192)
T ss_dssp SCHHHHTTSCSEEEECCCS-----------------CHHHHHHHHHHHTT--TSCTTCEEEECCSS
T ss_pred chhHhhhcccceehhhccc-----------------chhHHHHHHHHHhh--hcccCceeeccCcc
Confidence 3556778899999999742 13333455666666 23345667766654
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.60 E-value=1.8e-05 Score=59.44 Aligned_cols=73 Identities=14% Similarity=0.142 Sum_probs=51.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---h--CCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~--~~~d~vi~~a 94 (325)
..+|||+||+|-+|...++.+...|.+|+++++++++.+....... ...+|..+.+..+++ . +++|+|+++.
T Consensus 29 g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~~Ga---~~vi~~~~~~~~~~i~~~t~~~g~d~v~d~~ 105 (174)
T d1yb5a2 29 GESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQNGA---HEVFNHREVNYIDKIKKYVGEKGIDIIIEML 105 (174)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTC---SEEEETTSTTHHHHHHHHHCTTCEEEEEESC
T ss_pred CCEEEEEeccccccccccccccccCcccccccccccccccccccCc---ccccccccccHHHHhhhhhccCCceEEeecc
Confidence 3489999999999999999998899999999987765443333221 122454455433333 2 2589999997
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 106 g 106 (174)
T d1yb5a2 106 A 106 (174)
T ss_dssp H
T ss_pred c
Confidence 6
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.59 E-value=1.1e-05 Score=61.28 Aligned_cols=74 Identities=19% Similarity=0.263 Sum_probs=50.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCcc-ccCce----eecCCchhHhhhCCCCEEEECC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTR-FFPGV----MIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~~----d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|+||.|+| +|..|.+++..|.+.||+|++.+|+++............ ..+++ ++.-..++.++++++|+||.+.
T Consensus 7 m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiav 85 (189)
T d1n1ea2 7 LNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 85 (189)
T ss_dssp EEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECS
T ss_pred eceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhcccccccccccccccccccchhhhhccCCCCEEEEcC
Confidence 34799999 599999999999999999999999865443222110000 01111 2223346788899999999875
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.51 E-value=2.6e-05 Score=58.95 Aligned_cols=72 Identities=17% Similarity=0.017 Sum_probs=51.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a~ 95 (325)
.+|||+||+|-+|...++.+...|.+|+++++++++.+....... ...+|..+++..+++. +++|+||++.|
T Consensus 27 ~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~~Ga---~~vi~~~~~~~~~~v~~~t~~~g~d~v~d~~g 103 (183)
T d1pqwa_ 27 ERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSRLGV---EYVGDSRSVDFADEILELTDGYGVDVVLNSLA 103 (183)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHTTCC---SEEEETTCSTHHHHHHHHTTTCCEEEEEECCC
T ss_pred CEEEEECCCCCcccccchhhccccccceeeecccccccccccccc---cccccCCccCHHHHHHHHhCCCCEEEEEeccc
Confidence 589999999999999999888889999999998766554444321 1123444544333332 36999999987
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=97.51 E-value=0.00019 Score=52.26 Aligned_cols=67 Identities=27% Similarity=0.341 Sum_probs=39.3
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.|+|||||+|..|++.|.++++ ++..+..+.+........ . -+....+.....+.+.|.++.+++
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~~~~-----~--~~~~~~~~~~~~~~~~d~~f~~~~ 72 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSLKFK-----D--QDITIEETTETAFEGVDIALFSAG 72 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEEEET-----T--EEEEEEECCTTTTTTCSEEEECSC
T ss_pred EEEEECCCcHHHHHHHHHHHcCCCCceEEEEeccccccccccccc-----C--CcccccccchhhhhhhhhhhhccC
Confidence 799999999999999999988864 344443322222211111 1 111111222234567899998875
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.45 E-value=2.2e-05 Score=59.22 Aligned_cols=72 Identities=15% Similarity=0.065 Sum_probs=53.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---h--CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---I--QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~--~~~d~vi~~a~ 95 (325)
.+|+|+||+|-+|...++.+...|.+|+++++++++.+.....+. ...+|..+++..+++ . +++|+|+++.+
T Consensus 30 ~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~lGa---~~vi~~~~~d~~~~v~~~t~g~g~d~v~d~~g 106 (179)
T d1qora2 30 EQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALKAGA---WQVINYREEDLVERLKEITGGKKVRVVYDSVG 106 (179)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTCCEEEEEECSC
T ss_pred CEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHhcCC---eEEEECCCCCHHHHHHHHhCCCCeEEEEeCcc
Confidence 489999999999999999888889999999999877655443322 223555565544433 2 25899999986
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=97.43 E-value=0.00017 Score=53.94 Aligned_cols=73 Identities=11% Similarity=0.177 Sum_probs=54.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.+|.|+| .|.+|..+++.|++.||+|++++|++++...+....... ....-....+.+.+.+.++|.++-+..
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~~~~~~-~~~~~a~~~~~~~~~~~~~~~ii~~~~ 75 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLANEAKG-TKVLGAHSLEEMVSKLKKPRRIILLVK 75 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHHTTTTT-SSCEECSSHHHHHHHBCSSCEEEECSC
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHhcccc-ccccchhhhhhhhhhhcccceEEEecC
Confidence 4799999 699999999999999999999999998766554322100 011123355677778889999998864
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.43 E-value=0.0001 Score=54.71 Aligned_cols=73 Identities=18% Similarity=0.097 Sum_probs=52.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+|+|+|+ |-+|...++.+...|.+++++++++++.+....... ...+|..+.+......+++|++|.+.+.
T Consensus 31 G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~lGa---d~~i~~~~~~~~~~~~~~~D~vid~~g~ 103 (168)
T d1uufa2 31 GKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKALGA---DEVVNSRNADEMAAHLKSFDFILNTVAA 103 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHTC---SEEEETTCHHHHHTTTTCEEEEEECCSS
T ss_pred CCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhccCC---cEEEECchhhHHHHhcCCCceeeeeeec
Confidence 358999996 889999999888889999999987766443322211 1124444555555566789999999874
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00017 Score=49.20 Aligned_cols=68 Identities=13% Similarity=0.153 Sum_probs=52.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVN 92 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~ 92 (325)
..||.|+| .|.+|+-++....+.|++|++++.+++........ .+...++.|.+.+.+... ++|+|-.
T Consensus 11 ~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~va~----~~i~~~~~d~~~l~~~~~~~~~DviT~ 80 (111)
T d1kjqa2 11 ATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMHVAH----RSHVINMLDGDALRRVVELEKPHYIVP 80 (111)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGGGSS----EEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred CCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhhcCC----eEEECCCCCHHHHHHHHHhhCCceEEE
Confidence 45899999 59999999999999999999999987654332221 134467788888887764 6899964
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.0001 Score=46.50 Aligned_cols=40 Identities=30% Similarity=0.312 Sum_probs=35.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCccc
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAE 58 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 58 (325)
..++|+|+||+|-+|...++.+...|.+|+++++++++.+
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~ 70 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHE 70 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHH
Confidence 3458999999999999999988888999999999887644
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=97.36 E-value=4.4e-05 Score=55.79 Aligned_cols=64 Identities=16% Similarity=0.198 Sum_probs=46.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.++|+ |.+|.++++.|++.| ++|++.+|++++...+.... ++...+. . +.++++|+||-+.
T Consensus 1 MkI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~------~~~~~~~--~-~~v~~~Div~lav 65 (152)
T d1yqga2 1 MNVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKEL------GVETSAT--L-PELHSDDVLILAV 65 (152)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHT------CCEEESS--C-CCCCTTSEEEECS
T ss_pred CEEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhc------ccccccc--c-ccccccceEEEec
Confidence 79999995 999999999998877 89999999987655544321 1232222 1 1246789999774
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.27 E-value=0.00038 Score=48.77 Aligned_cols=68 Identities=10% Similarity=0.155 Sum_probs=46.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~~a 94 (325)
|||.|.|++|..|+.+.+.+.++|+++.+. +++.. ..... . -.-+|+..++.+.+.++ +..+|+=..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~--~~~~~-~----DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTT 73 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV--EELDS-P----DVVIDFSSPEALPKTVDLCKKYRAGLVLGTT 73 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE--EECSC-C----SEEEECSCGGGHHHHHHHHHHHTCEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH--HHhcc-C----CEEEEecCHHHHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999999999999987754 33221 11111 1 12478888887766554 667777555
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 74 G 74 (128)
T d1vm6a3 74 A 74 (128)
T ss_dssp S
T ss_pred C
Confidence 5
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.25 E-value=0.00039 Score=51.45 Aligned_cols=73 Identities=19% Similarity=0.058 Sum_probs=51.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec-CCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA-EEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~-d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..+|+|+|+ |-+|...++.+...|.+|+++++++++.+....... ...++.. +.+..++..+++|+++.+.+.
T Consensus 28 g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~lGa---~~~i~~~~~~~~~~~~~~~~d~vi~~~~~ 101 (168)
T d1piwa2 28 GKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMKMGA---DHYIATLEEGDWGEKYFDTFDLIVVCASS 101 (168)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHHHTC---SEEEEGGGTSCHHHHSCSCEEEEEECCSC
T ss_pred CCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhccCC---cEEeeccchHHHHHhhhcccceEEEEecC
Confidence 358999996 999999998887889999999998876554433221 1123333 334444555689999999774
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=5.4e-05 Score=56.74 Aligned_cols=72 Identities=21% Similarity=0.117 Sum_probs=50.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-CCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a~ 95 (325)
.+|||+||+|-+|...++.....|.+|++++|++++......... -..+|..+.+..+.+.+ ..|.++++.+
T Consensus 33 ~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~~lGa---d~vi~~~~~~~~~~l~~~~~~~vvD~Vg 105 (177)
T d1o89a2 33 GEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLKSLGA---SRVLPRDEFAESRPLEKQVWAGAIDTVG 105 (177)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHHHTE---EEEEEGGGSSSCCSSCCCCEEEEEESSC
T ss_pred CcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHHhhcc---ccccccccHHHHHHHHhhcCCeeEEEcc
Confidence 389999999999999999998899999999998887654443221 11123223322222222 4699999976
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.25 E-value=0.00036 Score=54.08 Aligned_cols=71 Identities=13% Similarity=0.185 Sum_probs=50.0
Q ss_pred CCeEEEECC----------------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhH--
Q 020476 20 QMTVSVTGA----------------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR-- 81 (325)
Q Consensus 20 ~~~ilI~Ga----------------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~-- 81 (325)
.|+||||+| ||..|.+|++++..+|++|+++......... .. ...+.+...+++.
T Consensus 6 g~~vlITaG~T~E~ID~VR~ItN~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~~~p--~~-----~~~~~~~t~~~m~~~ 78 (223)
T d1u7za_ 6 HLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSLPTP--PF-----VKRVDVMTALEMEAA 78 (223)
T ss_dssp TCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCCCCC--TT-----EEEEECCSHHHHHHH
T ss_pred CCEEEEECCCCcccCCCcceeccCCcHHHHHHHHHHHHHcCCchhhhhcccccCcc--cc-----cccceehhhHHHHHH
Confidence 468888875 8999999999999999999999876543211 00 1223344444444
Q ss_pred --hhhCCCCEEEECCCCC
Q 020476 82 --DCIQGSTAVVNLAGTP 97 (325)
Q Consensus 82 --~~~~~~d~vi~~a~~~ 97 (325)
+.++++|++|++|+..
T Consensus 79 ~~~~~~~~D~~i~aAAvs 96 (223)
T d1u7za_ 79 VNASVQQQNIFIGCAAVA 96 (223)
T ss_dssp HHHHGGGCSEEEECCBCC
T ss_pred HHhhhccceeEeeeechh
Confidence 3346899999999975
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=97.23 E-value=0.00081 Score=44.20 Aligned_cols=70 Identities=17% Similarity=0.200 Sum_probs=47.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccc-cCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAEL-IFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~-~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.+||+|+|. |-.|.++++.|.++|++|++.+.+...... .... .....+...+ ...+.++|.||-.-|.+
T Consensus 5 ~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~d~vi~SPGi~ 75 (93)
T d2jfga1 5 GKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKLPE-----AVERHTGSLN--DEWLMAADLIVASPGIA 75 (93)
T ss_dssp TCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGSCT-----TSCEEESBCC--HHHHHHCSEEEECTTSC
T ss_pred CCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHHhh-----ccceeecccc--hhhhccCCEEEECCCCC
Confidence 468999996 999999999999999999999986653322 1111 1112222211 23456889999987764
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.23 E-value=4.9e-05 Score=56.39 Aligned_cols=72 Identities=24% Similarity=0.148 Sum_probs=49.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec--CCchhHhhh-CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCI-QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--d~~~~~~~~-~~~d~vi~~a~ 95 (325)
.+|||+||+|-+|...++.....|.+|+++++++++.+....... -..+|.. +.+.+...- +++|+|+++.+
T Consensus 25 ~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~lGa---d~vi~~~~~~~~~~~~~~~~gvd~vid~vg 99 (167)
T d1tt7a2 25 GSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQLGA---SEVISREDVYDGTLKALSKQQWQGAVDPVG 99 (167)
T ss_dssp CCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHHHTC---SEEEEHHHHCSSCCCSSCCCCEEEEEESCC
T ss_pred CEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhcc---cceEeccchhchhhhcccCCCceEEEecCc
Confidence 379999999999999999888889999999999887665544322 1111111 111111111 36899999987
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.22 E-value=0.00011 Score=54.80 Aligned_cols=73 Identities=22% Similarity=0.117 Sum_probs=49.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhh--CCCCEEEECCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI--QGSTAVVNLAGT 96 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~--~~~d~vi~~a~~ 96 (325)
.+|||+||+|-+|...++.+...|.+|++.++++++......... -..+|..+. +...+.. +++|+||++.|-
T Consensus 33 ~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~~lGa---~~vi~~~~~~~~~~~~~~~~gvD~vid~vgg 108 (176)
T d1xa0a2 33 GPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLRVLGA---KEVLAREDVMAERIRPLDKQRWAAAVDPVGG 108 (176)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHHHTTC---SEEEECC---------CCSCCEEEEEECSTT
T ss_pred CEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHHhccc---ceeeecchhHHHHHHHhhccCcCEEEEcCCc
Confidence 479999999999999999888899999999999887655544332 111221111 1111122 379999999873
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.16 E-value=8.8e-05 Score=56.07 Aligned_cols=35 Identities=14% Similarity=0.245 Sum_probs=32.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
+||.|+|| |.+|+.++..++..|++|++++++++.
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~ 39 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHG 39 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHH
Confidence 58999996 999999999999999999999998754
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=97.09 E-value=0.0039 Score=43.48 Aligned_cols=87 Identities=17% Similarity=0.230 Sum_probs=58.8
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.|+||| |..|..+.+.|.+.| .+|+.+..+..... +.. -..++.++-..+|.++-+..
T Consensus 8 PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i~------------G~~--~y~sl~dlp~~vDlvvi~vp 73 (129)
T d2csua1 8 PKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEVQ------------GVK--AYKSVKDIPDEIDLAIIVVP 73 (129)
T ss_dssp CSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEET------------TEE--CBSSTTSCSSCCSEEEECSC
T ss_pred CCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCccccC------------CeE--eecchhhcCCCCceEEEecC
Confidence 4689999999 999999999998766 68998875543211 111 22234444457999998864
Q ss_pred CCCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 96 TPIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
...+..+++.|.+ .+++.++.+|+.
T Consensus 74 -------------------~~~~~~~~~~~~~--~g~~~~vi~s~G 98 (129)
T d2csua1 74 -------------------KRFVKDTLIQCGE--KGVKGVVIITAG 98 (129)
T ss_dssp -------------------HHHHHHHHHHHHH--HTCCEEEECCCS
T ss_pred -------------------hHHhHHHHHHHHH--cCCCEEEEeccc
Confidence 2233456677776 588888777765
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=97.09 E-value=0.00023 Score=52.79 Aligned_cols=73 Identities=19% Similarity=0.130 Sum_probs=49.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a 94 (325)
.+|+|+|++|-+|...++.+...| .+|+++++++.+.+....... ...++..+.+..++.. .++|+||.|+
T Consensus 29 ~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~~d~vid~~ 105 (170)
T d1jvba2 29 KTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKRAGA---DYVINASMQDPLAEIRRITESKGVDAVIDLN 105 (170)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTTSCEEEEEESC
T ss_pred CEEEEEeccccceeeeeecccccccccccccccchhhHHHHHHcCC---ceeeccCCcCHHHHHHHHhhcccchhhhccc
Confidence 489999999999999999888888 589999988765443332211 1123444444444433 2589999998
Q ss_pred CC
Q 020476 95 GT 96 (325)
Q Consensus 95 ~~ 96 (325)
+.
T Consensus 106 g~ 107 (170)
T d1jvba2 106 NS 107 (170)
T ss_dssp CC
T ss_pred cc
Confidence 73
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.08 E-value=0.0014 Score=44.73 Aligned_cols=72 Identities=10% Similarity=0.060 Sum_probs=48.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
...++|+|+| .|.+|..-++.|++.|.+|++++............ ..++.+....--.+.+.+++.|+.+.+
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-----~~~i~~~~~~~~~~dl~~~~lv~~at~ 81 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-----EGMLTLVEGPFDETLLDSCWLAIAATD 81 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-----TTSCEEEESSCCGGGGTTCSEEEECCS
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-----cCCceeeccCCCHHHhCCCcEEeecCC
Confidence 3457999999 59999999999999999999998766543221111 112333322222344678999997754
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=97.07 E-value=0.0012 Score=49.22 Aligned_cols=62 Identities=24% Similarity=0.233 Sum_probs=48.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|.|+| .|.||+.+++.|..-|.+|++++|++.... ..-.+.+.++++.+|+|+.+...
T Consensus 41 ~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~~~---------------~~~~~~l~ell~~sDiv~~~~pl 102 (181)
T d1qp8a1 41 QGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKEGP---------------WRFTNSLEEALREARAAVCALPL 102 (181)
T ss_dssp TTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCCSS---------------SCCBSCSHHHHTTCSEEEECCCC
T ss_pred cCceEEEec-cccccccceeeeeccccccccccccccccc---------------eeeeechhhhhhccchhhccccc
Confidence 346899999 699999999999999999999998764311 11123678899999999987754
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=97.03 E-value=0.00018 Score=54.81 Aligned_cols=39 Identities=28% Similarity=0.438 Sum_probs=31.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIF 61 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~ 61 (325)
|||.|+| .||+|..++..| +.|++|++++-++.....+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence 7999998 799999998655 57999999998876654443
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=96.94 E-value=0.0013 Score=48.49 Aligned_cols=64 Identities=11% Similarity=0.187 Sum_probs=42.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
++||.|+| +|++|+.+++.|.+. +.+++++......... . ......++...+..++|+|+.+..
T Consensus 3 kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~~---------~--~~~~~~~~~~~~~~~~D~Vvi~tp 67 (170)
T d1f06a1 3 NIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLDT---------K--TPVFDVADVDKHADDVDVLFLCMG 67 (170)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCSS---------S--SCEEEGGGGGGTTTTCSEEEECSC
T ss_pred cceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEeccccccc---------c--cccccchhhhhhccccceEEEeCC
Confidence 46899999 699999999999875 4677766543322111 0 112223344555678999999875
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.86 E-value=0.00089 Score=49.25 Aligned_cols=72 Identities=24% Similarity=0.146 Sum_probs=48.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh---hCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~~~~d~vi~~a~ 95 (325)
..+|+|+|+ |-+|...++.+...|.+|+++++++.+.+....... ...+|..+.+..+++ ..+.+.+|.+++
T Consensus 28 g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~g~~~~i~~~~ 102 (166)
T d1llua2 28 GQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELARKLGA---SLTVNARQEDPVEAIQRDIGGAHGVLVTAV 102 (166)
T ss_dssp TCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHSSEEEEEECCS
T ss_pred CCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhhccCc---cccccccchhHHHHHHHhhcCCcccccccc
Confidence 358999986 999999999888889999999998766544333221 112444455444433 346677777765
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=96.84 E-value=0.00069 Score=51.29 Aligned_cols=64 Identities=17% Similarity=0.091 Sum_probs=48.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|.|+| .|.||+.+++.|..-|.+|+++++........ +....+.+.++++.+|+|+.+...
T Consensus 43 gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~------------~~~~~~~l~~~l~~sDii~~~~pl 106 (197)
T d1j4aa1 43 DQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELEK------------KGYYVDSLDDLYKQADVISLHVPD 106 (197)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH------------TTCBCSCHHHHHHHCSEEEECSCC
T ss_pred CCeEEEec-ccccchhHHHhHhhhcccccccCccccccccc------------ceeeeccccccccccccccccCCc
Confidence 46899999 79999999999998899999998765432211 112345678888889988877654
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=96.82 E-value=0.00066 Score=50.19 Aligned_cols=73 Identities=23% Similarity=0.179 Sum_probs=47.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeec----CCchhHhhh-----CCCCEE
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIA----EEPQWRDCI-----QGSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~----d~~~~~~~~-----~~~d~v 90 (325)
..+|+|+| +|-+|...++.+...|.+|+++++++.+.+....... ...+... +.+.+.+.+ .++|+|
T Consensus 27 g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~~~ga---~~~~~~~~~~~~~~~~~~~~~~~~g~g~D~v 102 (170)
T d1e3ja2 27 GTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKNCGA---DVTLVVDPAKEEESSIIERIRSAIGDLPNVT 102 (170)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTC---SEEEECCTTTSCHHHHHHHHHHHSSSCCSEE
T ss_pred CCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHHHHcCC---cEEEeccccccccchhhhhhhcccccCCcee
Confidence 34899998 6999999999998899999999998876543332211 0001111 112222222 369999
Q ss_pred EECCCC
Q 020476 91 VNLAGT 96 (325)
Q Consensus 91 i~~a~~ 96 (325)
|.++|.
T Consensus 103 id~~g~ 108 (170)
T d1e3ja2 103 IDCSGN 108 (170)
T ss_dssp EECSCC
T ss_pred eecCCC
Confidence 999873
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=96.81 E-value=0.001 Score=45.76 Aligned_cols=37 Identities=22% Similarity=0.327 Sum_probs=32.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..+++++|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 20 ~~p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 20 EVPKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred hcCCeEEEECC-CccceeeeeeecccccEEEEEEecce
Confidence 34579999995 99999999999999999999998774
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.81 E-value=0.00026 Score=52.94 Aligned_cols=74 Identities=19% Similarity=0.288 Sum_probs=50.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cCcee-ecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVM-IAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~d-~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||-|+| .|.+|..+++.|++.||+|++++|++++...+.+...... ..... ..+.+.+...+...+.++-+..
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQ 77 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCC
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeec
Confidence 6999999 8999999999999999999999998877655433221000 11122 1234455555667777776654
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=96.79 E-value=0.00052 Score=50.85 Aligned_cols=74 Identities=15% Similarity=0.108 Sum_probs=50.5
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...++|+|+|+ |..+++++..|.+.|.+|+++.|+.++...+..... ....+...+.+.. ...++|+|||+...
T Consensus 16 ~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~--~~~~~~~~~~~~~--~~~~~dliIN~Tp~ 89 (170)
T d1nyta1 16 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFA--HTGSIQALSMDEL--EGHEFDLIINATSS 89 (170)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTG--GGSSEEECCSGGG--TTCCCSEEEECCSC
T ss_pred CCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHh--hcccccccccccc--cccccceeeccccc
Confidence 34579999995 888999999999999999999998877554433211 0111222333322 23578999999764
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.75 E-value=0.00063 Score=50.58 Aligned_cols=72 Identities=13% Similarity=-0.009 Sum_probs=47.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhH---hhh--CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWR---DCI--QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~---~~~--~~~d~vi~~a 94 (325)
.+|+|+|+ |-+|...++.+...|. +|+++++++.+......... ...+|..+.+..+ ++. +++|+||.++
T Consensus 29 ~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~lGa---~~~i~~~~~~~~~~v~~~t~g~G~D~vid~~ 104 (174)
T d1jqba2 29 SSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGA---TDILNYKNGHIEDQVMKLTNGKGVDRVIMAG 104 (174)
T ss_dssp CCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHHHTC---SEEECGGGSCHHHHHHHHTTTSCEEEEEECS
T ss_pred CEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHhhCc---cccccccchhHHHHHHHHhhccCcceEEEcc
Confidence 48999986 9999999998888886 79999987765443332211 1123444433333 332 2599999999
Q ss_pred CC
Q 020476 95 GT 96 (325)
Q Consensus 95 ~~ 96 (325)
|.
T Consensus 105 g~ 106 (174)
T d1jqba2 105 GG 106 (174)
T ss_dssp SC
T ss_pred CC
Confidence 84
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.72 E-value=0.0014 Score=48.74 Aligned_cols=72 Identities=11% Similarity=0.097 Sum_probs=49.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCch----hHhhh--CCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ----WRDCI--QGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~----~~~~~--~~~d~vi~~ 93 (325)
.+|+|+|+ |-+|...++.+...| .+|+++++++++.+...+... ...+|..+.+. +.+.. .++|++|.+
T Consensus 31 ~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak~~GA---~~~in~~~~~~~~~~~~~~~~g~G~d~vi~~ 106 (176)
T d1d1ta2 31 STCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMAVGA---TECISPKDSTKPISEVLSEMTGNNVGYTFEV 106 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHHTSCCCEEEEC
T ss_pred CEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHHhcCC---cEEECccccchHHHHHHHHhccccceEEEEe
Confidence 47999985 999999999999998 589999998877544333222 11233333332 22222 379999999
Q ss_pred CCC
Q 020476 94 AGT 96 (325)
Q Consensus 94 a~~ 96 (325)
.+.
T Consensus 107 ~g~ 109 (176)
T d1d1ta2 107 IGH 109 (176)
T ss_dssp SCC
T ss_pred CCc
Confidence 874
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.70 E-value=0.0008 Score=50.38 Aligned_cols=78 Identities=9% Similarity=0.108 Sum_probs=54.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCC------CccccCceeecCCchhHhhhCCCCEE
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGK------KTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~------~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
...++|+|+|+ |..|++++..|.+.|. .++++.|+++...+..... ........++.+.+.+.+.+.++|+|
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dii 94 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALASADIL 94 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHTCSEE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhccccee
Confidence 34579999995 8899999999999885 7999999877544321100 00001124555677777778899999
Q ss_pred EECCCC
Q 020476 91 VNLAGT 96 (325)
Q Consensus 91 i~~a~~ 96 (325)
||+...
T Consensus 95 IN~Tp~ 100 (182)
T d1vi2a1 95 TNGTKV 100 (182)
T ss_dssp EECSST
T ss_pred ccccCC
Confidence 999864
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.66 E-value=0.001 Score=48.95 Aligned_cols=67 Identities=15% Similarity=0.254 Sum_probs=46.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|+|+|+ |..|++++..|.+.|. +|+++.|+.++...+... +....+ +. + ...++|+|||+...
T Consensus 16 ~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~-----~~~~~~-~~--~--~~~~~DliINaTpi 83 (167)
T d1npya1 16 KNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL-----YGYAYI-NS--L--ENQQADILVNVTSI 83 (167)
T ss_dssp TTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH-----HTCEEE-SC--C--TTCCCSEEEECSST
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh-----hhhhhh-hc--c--cccchhhheecccc
Confidence 3468999995 9999999999999995 899999988765544321 111111 11 1 12468999998764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=96.66 E-value=0.0021 Score=47.62 Aligned_cols=91 Identities=13% Similarity=0.034 Sum_probs=55.6
Q ss_pred chhhhHHHHHHHHHhh-hcCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCch
Q 020476 2 DLAASEILLTFCRLLQ-ASQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ 79 (325)
Q Consensus 2 ~~~~~~~~~~~~~~~~-~~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~ 79 (325)
+|+..+.+....+... ....+|+|+|+ |-+|...++.+...|. +|+++++++++.+....... ...+|..+.+.
T Consensus 9 gCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~~lGa---~~~i~~~~~d~ 84 (174)
T d1p0fa2 9 GCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIELGA---TECLNPKDYDK 84 (174)
T ss_dssp GTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSS
T ss_pred hhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHHHcCC---cEEEcCCCchh
Confidence 4444444444333221 22348999995 9999999999988885 79999998877544443322 22234333332
Q ss_pred -hHhhh-----CCCCEEEECCCC
Q 020476 80 -WRDCI-----QGSTAVVNLAGT 96 (325)
Q Consensus 80 -~~~~~-----~~~d~vi~~a~~ 96 (325)
+.+.. .++|++|.+++.
T Consensus 85 ~~~~~~~~~~~~G~d~vid~~g~ 107 (174)
T d1p0fa2 85 PIYEVICEKTNGGVDYAVECAGR 107 (174)
T ss_dssp CHHHHHHHHTTSCBSEEEECSCC
T ss_pred HHHHHHHHhcCCCCcEEEEcCCC
Confidence 22222 379999999873
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=96.65 E-value=0.0016 Score=45.03 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=31.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
.++|+|+| .|++|..++..|.+.|.+|+.+.|++.
T Consensus 30 ~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 30 QSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence 46899999 499999999999999999999999774
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.63 E-value=0.00034 Score=51.91 Aligned_cols=74 Identities=15% Similarity=0.132 Sum_probs=49.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...++|+|+|+ |..+++++..|.+.+.+|+++.|+.++...+..... ....+...+.+ ...+.++|+||++...
T Consensus 16 ~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~--~~~~~~~~~~~--~~~~~~~diiIN~tp~ 89 (171)
T d1p77a1 16 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQ--PYGNIQAVSMD--SIPLQTYDLVINATSA 89 (171)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHG--GGSCEEEEEGG--GCCCSCCSEEEECCCC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHh--hccccchhhhc--cccccccceeeecccc
Confidence 34568999995 888999999999888899999999866554433210 01111111111 1235689999999864
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=96.61 E-value=0.0016 Score=44.76 Aligned_cols=35 Identities=14% Similarity=0.387 Sum_probs=31.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
.++|+|+|| |++|..++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 56 (117)
T d1onfa2 22 SKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGNR 56 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSS
T ss_pred CCEEEEECC-chHHHHHHHHHHhccccceeeehhcc
Confidence 568999995 99999999999999999999998764
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=96.61 E-value=0.00091 Score=50.06 Aligned_cols=72 Identities=21% Similarity=0.151 Sum_probs=48.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCc--h----hHhhh--CCCCEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP--Q----WRDCI--QGSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~--~----~~~~~--~~~d~vi 91 (325)
.+|+|+|+ |-+|...++.+...|. +|+++++++++.+...+.+. ...+|..+.+ . +.+.. +++|+||
T Consensus 30 ~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~~lGa---~~vi~~~~~~~~~~~~~i~~~~~~~g~Dvvi 105 (182)
T d1vj0a2 30 KTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGA---DLTLNRRETSVEERRKAIMDITHGRGADFIL 105 (182)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHHTTC---SEEEETTTSCHHHHHHHHHHHTTTSCEEEEE
T ss_pred CEEEEECC-Cccchhheecccccccccccccccccccccccccccc---eEEEeccccchHHHHHHHHHhhCCCCceEEe
Confidence 58999996 8999999999988896 89999998876544332221 1123333332 1 22222 2689999
Q ss_pred ECCCC
Q 020476 92 NLAGT 96 (325)
Q Consensus 92 ~~a~~ 96 (325)
.+.|.
T Consensus 106 d~vG~ 110 (182)
T d1vj0a2 106 EATGD 110 (182)
T ss_dssp ECSSC
T ss_pred ecCCc
Confidence 99874
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.60 E-value=0.014 Score=39.66 Aligned_cols=80 Identities=15% Similarity=0.193 Sum_probs=53.3
Q ss_pred CeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 21 MTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
++|.|+|+| +..|..+++.|++.||+|+.+..+... ..+.. -..++.++-..+|.++-+..
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~------------i~G~~--~y~sl~~lp~~~D~vvi~vp-- 65 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDE------------IEGLK--CYRSVRELPKDVDVIVFVVP-- 65 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE------------ETTEE--CBSSGGGSCTTCCEEEECSC--
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEcccccc------------ccCcc--ccccchhccccceEEEEEeC--
Confidence 589999998 679999999999999999887543322 11122 22345555557899987753
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCE
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPS 135 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~ 135 (325)
...+..+++.|.+ .+.+.+
T Consensus 66 -----------------~~~~~~~l~~~~~--~g~k~v 84 (116)
T d1y81a1 66 -----------------PKVGLQVAKEAVE--AGFKKL 84 (116)
T ss_dssp -----------------HHHHHHHHHHHHH--TTCCEE
T ss_pred -----------------HHHHHHHHHHHHh--cCCceE
Confidence 2233456666766 576654
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.59 E-value=0.0018 Score=47.76 Aligned_cols=72 Identities=19% Similarity=0.075 Sum_probs=46.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeec--CCchhHhhh-----CCCCEEEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIA--EEPQWRDCI-----QGSTAVVN 92 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~--d~~~~~~~~-----~~~d~vi~ 92 (325)
.+|+|+|+ |-+|...++.+...|. +|+++++++.+.....+... ....+.. +.....+.+ .++|+||.
T Consensus 28 d~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~~~~~~~~~g~g~Dvvid 103 (171)
T d1pl8a2 28 HKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKEIGA---DLVLQISKESPQEIARKVEGQLGCKPEVTIE 103 (171)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---SEEEECSSCCHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHHhCC---cccccccccccccccccccccCCCCceEEEe
Confidence 48999986 9999999999988897 79999988766443322211 0111211 222222222 26899999
Q ss_pred CCCC
Q 020476 93 LAGT 96 (325)
Q Consensus 93 ~a~~ 96 (325)
+.|.
T Consensus 104 ~~G~ 107 (171)
T d1pl8a2 104 CTGA 107 (171)
T ss_dssp CSCC
T ss_pred ccCC
Confidence 9873
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=96.55 E-value=0.0019 Score=44.28 Aligned_cols=37 Identities=22% Similarity=0.300 Sum_probs=32.8
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..++||+|+| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 19 ~~p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 55 (116)
T d1gesa2 19 ALPERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFDA 55 (116)
T ss_dssp SCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred hCCCEEEEEC-CChhhHHHHHHhhccccEEEEEeecch
Confidence 3457999999 499999999999999999999999764
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.53 E-value=0.00085 Score=48.80 Aligned_cols=74 Identities=9% Similarity=0.119 Sum_probs=56.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
-|++|+|+ |-.|..-++...+.|-+|++++.+.+..+.+..... .....-..+.+.+.+.++++|+||.++-.+
T Consensus 33 a~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~--~~~~~~~~~~~~l~~~~~~aDivI~aalip 106 (168)
T d1pjca1 33 GKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG--SRVELLYSNSAEIETAVAEADLLIGAVLVP 106 (168)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG--GGSEEEECCHHHHHHHHHTCSEEEECCCCT
T ss_pred cEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc--ccceeehhhhhhHHHhhccCcEEEEeeecC
Confidence 48999995 999999999999999999999998776544332210 012233447778889999999999999765
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.53 E-value=0.0037 Score=46.16 Aligned_cols=91 Identities=15% Similarity=0.044 Sum_probs=53.5
Q ss_pred chhhhHHHHHHHHHhhh-cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCc-
Q 020476 2 DLAASEILLTFCRLLQA-SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP- 78 (325)
Q Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~- 78 (325)
+|+..+.+......... ...+|+|+| .|-+|...++.+...|. .|++.++++.+.....+... ...++....+
T Consensus 10 ~Ca~~T~~~a~~~~a~v~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~~~Ga---~~~i~~~~~~~ 85 (174)
T d1e3ia2 10 GCGFSSGYGAAINTAKVTPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGA---TDCLNPRELDK 85 (174)
T ss_dssp GTHHHHHHHHHHTTSCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSS
T ss_pred hhHHHHHHHHHHHhhCCCCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHHHHHhCC---CcccCCccchh
Confidence 34444444433332222 234899998 59999999999998897 68888887766433332221 1112322222
Q ss_pred hhHhhh-----CCCCEEEECCCC
Q 020476 79 QWRDCI-----QGSTAVVNLAGT 96 (325)
Q Consensus 79 ~~~~~~-----~~~d~vi~~a~~ 96 (325)
...+.. .++|+||.|+|.
T Consensus 86 ~~~~~~~~~~~~G~d~vie~~G~ 108 (174)
T d1e3ia2 86 PVQDVITELTAGGVDYSLDCAGT 108 (174)
T ss_dssp CHHHHHHHHHTSCBSEEEESSCC
T ss_pred hhhhhHhhhhcCCCcEEEEeccc
Confidence 222222 379999999984
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=96.49 E-value=0.0018 Score=48.76 Aligned_cols=66 Identities=18% Similarity=0.155 Sum_probs=48.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|.|+| .|.||+.+++.|..-|.+|.+.++........ ...+...+++.++++.+|+|+.+...
T Consensus 49 gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~----------~~~~~~~~~l~~ll~~sD~i~~~~pl 114 (193)
T d1mx3a1 49 GETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVER----------ALGLQRVSTLQDLLFHSDCVTLHCGL 114 (193)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHH----------HHTCEECSSHHHHHHHCSEEEECCCC
T ss_pred CceEEEec-cccccccceeeeeccccceeeccCcccccchh----------hhccccccchhhccccCCEEEEeecc
Confidence 46899999 79999999999998899999999865432110 01222345677778888888776654
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=96.45 E-value=0.002 Score=44.65 Aligned_cols=35 Identities=23% Similarity=0.216 Sum_probs=31.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
..+++++|+|| |+||..++..|.+.|.+|+++.|+
T Consensus 18 ~~P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 18 YCPGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp SCCCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred cCCCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 34568999995 999999999999999999999875
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.44 E-value=0.0012 Score=49.04 Aligned_cols=72 Identities=13% Similarity=0.068 Sum_probs=44.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccccCCCCCccccCceeecCCchhHhh---hC-CCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC---IQ-GSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~---~~-~~d~vi~~a~ 95 (325)
.+|+|+|+ |-+|...++.+...|.. |++.++++.+.+...+... ..-+|..+.+..+++ .. ++|+||.|.|
T Consensus 30 ~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~i~~~t~gg~D~vid~~G 105 (174)
T d1f8fa2 30 SSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQLGA---THVINSKTQDPVAAIKEITDGGVNFALESTG 105 (174)
T ss_dssp CEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHTC---SEEEETTTSCHHHHHHHHTTSCEEEEEECSC
T ss_pred CEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHHcCC---eEEEeCCCcCHHHHHHHHcCCCCcEEEEcCC
Confidence 48999997 99999999888777875 4555666554333222111 112344444433332 22 5999999987
Q ss_pred C
Q 020476 96 T 96 (325)
Q Consensus 96 ~ 96 (325)
.
T Consensus 106 ~ 106 (174)
T d1f8fa2 106 S 106 (174)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=96.43 E-value=0.0038 Score=43.18 Aligned_cols=36 Identities=22% Similarity=0.359 Sum_probs=31.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..++|+|+| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~~ 64 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILDR 64 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecCc
Confidence 356899999 599999999999999999999988763
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.42 E-value=0.0019 Score=44.18 Aligned_cols=37 Identities=27% Similarity=0.311 Sum_probs=32.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..+++++|+| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 19 ~~p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~~ 55 (115)
T d1lvla2 19 ALPQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARER 55 (115)
T ss_dssp SCCSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeecc
Confidence 3457999999 499999999999999999999988764
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=96.41 E-value=0.0027 Score=43.68 Aligned_cols=38 Identities=26% Similarity=0.252 Sum_probs=33.3
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
...+++++|+| .|+||..++..|.+.|.+|+++.|...
T Consensus 19 ~~~p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 19 QNVPGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp SSCCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred ccCCCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence 33457999999 599999999999999999999998764
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.38 E-value=0.0026 Score=44.02 Aligned_cols=38 Identities=16% Similarity=0.205 Sum_probs=33.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
..+++++|+|| |+||..++..|.+.|.+|+.+.|.+.-
T Consensus 21 ~~p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~~~ 58 (122)
T d1v59a2 21 EIPKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQPQI 58 (122)
T ss_dssp SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred cCCCeEEEECC-CchHHHHHHHHHhhCcceeEEEecccc
Confidence 34579999994 999999999999999999999987643
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=96.37 E-value=0.016 Score=40.70 Aligned_cols=84 Identities=14% Similarity=0.096 Sum_probs=55.8
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|+|+||| +-.|..+++.|.+.||+|+.+...... ..+.. -..++.++-..+|.|+-+..
T Consensus 19 ~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~------------i~G~~--~~~sl~dlp~~iD~v~i~vp- 83 (139)
T d2d59a1 19 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEE------------VLGRK--CYPSVLDIPDKIEVVDLFVK- 83 (139)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSE------------ETTEE--CBSSGGGCSSCCSEEEECSC-
T ss_pred CCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCcccc------------cCCCc--ccccccccCccceEEEEEeC-
Confidence 4689999998 789999999999999999888644322 11112 12344555557899888754
Q ss_pred CCCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEe
Q 020476 97 PIGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVS 139 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~S 139 (325)
...+..+++.|.+ .+++ .+++.
T Consensus 84 ------------------~~~~~~~~~e~~~--~g~k-~v~~~ 105 (139)
T d2d59a1 84 ------------------PKLTMEYVEQAIK--KGAK-VVWFQ 105 (139)
T ss_dssp ------------------HHHHHHHHHHHHH--HTCS-EEEEC
T ss_pred ------------------HHHHHHHHHHHHH--hCCC-EEEEe
Confidence 2233466677766 5665 44444
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.36 E-value=0.0028 Score=44.02 Aligned_cols=36 Identities=19% Similarity=0.285 Sum_probs=32.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
.+++++|+|| |++|..++..|.+.|.+|+.+.|++.
T Consensus 21 ~pk~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~~ 56 (125)
T d3grsa2 21 LPGRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHDK 56 (125)
T ss_dssp CCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEEcC-CccHHHHHHHHhcCCcEEEEEeeccc
Confidence 3579999995 99999999999999999999999764
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=96.35 E-value=0.0036 Score=47.35 Aligned_cols=63 Identities=22% Similarity=0.207 Sum_probs=47.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|.|+| .|.||+.+++.|..-|.+|+++++....... ...+ ...+.++++.+|+|+.+...
T Consensus 45 ~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~----------~~~~---~~~l~~l~~~~D~v~~~~pl 107 (199)
T d1dxya1 45 QQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGDH----------PDFD---YVSLEDLFKQSDVIDLHVPG 107 (199)
T ss_dssp GSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSCC----------TTCE---ECCHHHHHHHCSEEEECCCC
T ss_pred ceeeeeee-cccccccccccccccceeeeccCCccchhhh----------cchh---HHHHHHHHHhcccceeeecc
Confidence 46899999 7999999999999889999999986543211 1122 23577778889988877654
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=96.33 E-value=0.0025 Score=44.06 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=30.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
++++|+|| |++|-.++..|.+.|.+|+++.|.+.
T Consensus 33 ~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEECC-cHHHHHHHHHhhcccceEEEEecccc
Confidence 58999995 99999999999999999999998653
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=96.32 E-value=0.0097 Score=38.28 Aligned_cols=70 Identities=11% Similarity=0.072 Sum_probs=45.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
|||-++|-.|-==+.|++.|+++|++|.+-++..+.....+.. .++.+.-... .+.++++|.||...+.+
T Consensus 2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~------~Gi~i~~gh~-~~~i~~~d~vV~SsAI~ 71 (89)
T d1j6ua1 2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRK------LGIPIFVPHS-ADNWYDPDLVIKTPAVR 71 (89)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH------TTCCEESSCC-TTSCCCCSEEEECTTCC
T ss_pred cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHH------CCCeEEeeec-ccccCCCCEEEEecCcC
Confidence 7999999655333478899999999999999987553332221 1233321111 12246899999998864
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=96.31 E-value=0.0012 Score=48.73 Aligned_cols=77 Identities=17% Similarity=0.175 Sum_probs=49.3
Q ss_pred CCeEEEECCCchHHHH--HHHHHHhC----CCeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEE
Q 020476 20 QMTVSVTGATGFIGRR--LVQRLQAD----NHQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAV 90 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~--l~~~L~~~----g~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~v 90 (325)
.|||.|+|| |.+|.. ++..|+.. +.++..+++++++.+.... ...........+...++..++++++|+|
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~i~~~td~~eaL~dad~V 80 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEVGADLKFEKTMNLDDVIIDADFV 80 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSEE
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCCeEEEEeCChhhcccCCCeE
Confidence 479999996 888865 34445443 3599999998765332110 0000001234555666788899999999
Q ss_pred EECCCCC
Q 020476 91 VNLAGTP 97 (325)
Q Consensus 91 i~~a~~~ 97 (325)
+..++..
T Consensus 81 v~~~~~g 87 (171)
T d1obba1 81 INTAMVG 87 (171)
T ss_dssp EECCCTT
T ss_pred eeecccc
Confidence 9998753
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=96.31 E-value=0.0027 Score=47.66 Aligned_cols=67 Identities=16% Similarity=0.129 Sum_probs=48.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.++|.|+| .|.||+.+++.|..-|.+|..++|......... ...+.....+.++++++|+|+-+...
T Consensus 44 ~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------~~~~~~~~~l~~~l~~sD~v~~~~pl 110 (188)
T d2naca1 44 AMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK---------ELNLTWHATREDMYPVCDVVTLNCPL 110 (188)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH---------HHTCEECSSHHHHGGGCSEEEECSCC
T ss_pred ccceeecc-ccccchhhhhhhhccCceEEEEeeccccccccc---------cccccccCCHHHHHHhccchhhcccc
Confidence 46899999 799999999999888999999998754322211 11233455677778888888766654
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=96.30 E-value=0.0058 Score=42.40 Aligned_cols=91 Identities=13% Similarity=0.151 Sum_probs=58.7
Q ss_pred CeEEEECCCchHHHHHHHHHHh-CCCeEEEEecCCC-cccccCCCCCccccCceeecCCchhHhhhC-CCCEEEECCCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRSRS-KAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-GSTAVVNLAGTP 97 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~~~-~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-~~d~vi~~a~~~ 97 (325)
.+|+|.|| |.+|+.|++.+.. .+++++++.-+.. ..... ..++.+...+.+.+..+ .+++++-+..
T Consensus 4 ~~v~I~Ga-G~~G~~l~~~l~~~~~~~iv~fiDdd~~k~G~~--------I~Gi~V~~~~~l~~~~~~~i~iai~~i~-- 72 (126)
T d2dt5a2 4 WGLCIVGM-GRLGSALADYPGFGESFELRGFFDVDPEKVGRP--------VRGGVIEHVDLLPQRVPGRIEIALLTVP-- 72 (126)
T ss_dssp EEEEEECC-SHHHHHHHHCSCCCSSEEEEEEEESCTTTTTCE--------ETTEEEEEGGGHHHHSTTTCCEEEECSC--
T ss_pred ceEEEEcC-CHHHHHHHHhHhhcCCcEEEEEEeCchHhcCCE--------ECCEEEecHHHHHHHHhhcccEEEEeCC--
Confidence 38999995 9999999997754 3678888865432 22111 34566777788887765 5677666643
Q ss_pred CCCCCChhhHHHHHHHhhHHHHHHHHHHhcCCCCCCCEEEEeee
Q 020476 98 IGTRWSSEIKKEIKESRIRVTSKVVDLINESPEGVRPSVLVSAT 141 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~~~~~~~~~v~~Ss~ 141 (325)
-...+.+++.|.+ .+++.+.-++..
T Consensus 73 -----------------~~~~~~I~d~l~~--~gIk~I~~f~~~ 97 (126)
T d2dt5a2 73 -----------------REAAQKAADLLVA--AGIKGILNFAPV 97 (126)
T ss_dssp -----------------HHHHHHHHHHHHH--HTCCEEEECSSS
T ss_pred -----------------HHHHHHHHHHHHH--cCCCEEeecCce
Confidence 1223456777777 577755544443
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.29 E-value=0.007 Score=44.43 Aligned_cols=77 Identities=13% Similarity=0.078 Sum_probs=45.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC-CeEEEEec-CCCcccc-cCCC-CCcc--ccCc------eeecCCchhHhhhCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR-SRSKAEL-IFPG-KKTR--FFPG------VMIAEEPQWRDCIQG 86 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r-~~~~~~~-~~~~-~~~~--~~~~------~d~~d~~~~~~~~~~ 86 (325)
|++||.|-| .|-||+.+++.|.+++ .+|+++.- ++..... +... .... .... ..+.....+..+..+
T Consensus 1 M~irIaING-fGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (172)
T d2czca2 1 MKVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAKELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEK 79 (172)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTT
T ss_pred CcEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhhhcCceeecccccceeeecccCccccchhhhhhcc
Confidence 567999999 7999999999998765 57776653 2222111 1100 0000 0000 001122355566679
Q ss_pred CCEEEECCCC
Q 020476 87 STAVVNLAGT 96 (325)
Q Consensus 87 ~d~vi~~a~~ 96 (325)
+|+|+-|.|.
T Consensus 80 vDvViEcTG~ 89 (172)
T d2czca2 80 VDIIVDATPG 89 (172)
T ss_dssp CSEEEECCST
T ss_pred CCEEEECCCC
Confidence 9999999985
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=96.25 E-value=0.0032 Score=45.44 Aligned_cols=73 Identities=11% Similarity=0.107 Sum_probs=52.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCC--CCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPG--KKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~--~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
+|+|+|. |-+|..+++.|.+.|++|+++..+++........ ........+|..|++.+.++ ++++|+||-+..
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~ 80 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSD 80 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSS
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccc
Confidence 5899995 9999999999999999999999877542211110 00011345677888888765 478999998864
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.24 E-value=0.0041 Score=46.02 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=47.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCC-chhHhhh-----CCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEE-PQWRDCI-----QGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~-~~~~~~~-----~~~d~vi~~ 93 (325)
.+|+|+|+ |-+|...+..+...| .+|+++++++.+......... ...++..+. +.+.+.. .++|++|.+
T Consensus 30 dtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~~~Ga---~~~i~~~~~~~~~~~~~~~~~~~G~D~vid~ 105 (176)
T d2jhfa2 30 STCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGA---TECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 105 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHHHhCC---eeEEecCCchhHHHHHHHHHhcCCCCEEEec
Confidence 48999998 558988888888887 589999998877554443322 112333232 2233222 379999999
Q ss_pred CCC
Q 020476 94 AGT 96 (325)
Q Consensus 94 a~~ 96 (325)
.|.
T Consensus 106 ~G~ 108 (176)
T d2jhfa2 106 IGR 108 (176)
T ss_dssp SCC
T ss_pred CCc
Confidence 874
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.24 E-value=0.0057 Score=42.87 Aligned_cols=71 Identities=21% Similarity=0.259 Sum_probs=43.4
Q ss_pred eEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC-----CCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ-----GSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~-----~~d~vi~~a~ 95 (325)
||.|.|++|..|+.+++.+.+. ++++.+..-..+.......... -.-+|+..|+.+.+.++ +...|+=..|
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~~~~~---DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG 77 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLTDGNT---EVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTG 77 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHHTTTC---SEEEECCCTTTHHHHHHHHHHTTCEEEECCCC
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhccccC---CEEEEcccHHHHHHHHHHHHhcCCCEEEeccc
Confidence 7999999999999999988765 5676654322222111111100 22467778876665443 6677774444
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=96.22 E-value=0.0058 Score=45.69 Aligned_cols=65 Identities=14% Similarity=0.032 Sum_probs=48.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
..++|.|+| .|.||+.+++.|..-|.+|+..++....... .....+.+.++++.+|+|+.++...
T Consensus 43 ~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~-------------~~~~~~~l~ell~~sDii~i~~plt 107 (188)
T d1sc6a1 43 RGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPLG-------------NATQVQHLSDLLNMSDVVSLHVPEN 107 (188)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCCT-------------TCEECSCHHHHHHHCSEEEECCCSS
T ss_pred cceEEEEee-cccchhhhhhhcccccceEeeccccccchhh-------------hhhhhhhHHHHHhhccceeecccCC
Confidence 346899998 7999999999999889999999986532211 1112246778888899998777643
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.14 E-value=0.0075 Score=44.43 Aligned_cols=72 Identities=10% Similarity=0.070 Sum_probs=45.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecC-CchhHhhh-----CCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAE-EPQWRDCI-----QGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d-~~~~~~~~-----~~~d~vi~~ 93 (325)
.+|+|.|+ |.+|...++.+...|. .|++.++++.+.+...+... ...+|..+ .+.+.+.+ .++|+||.+
T Consensus 30 ~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak~lGa---~~~i~~~~~~~~~~~~~~~~~~~g~D~vid~ 105 (176)
T d2fzwa2 30 SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGA---TECINPQDFSKPIQEVLIEMTDGGVDYSFEC 105 (176)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHHHTC---SEEECGGGCSSCHHHHHHHHTTSCBSEEEEC
T ss_pred CEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHHHhCC---cEEEeCCchhhHHHHHHHHHcCCCCcEeeec
Confidence 48999997 5689999988888885 67777776665443332221 11233332 23333332 379999999
Q ss_pred CCC
Q 020476 94 AGT 96 (325)
Q Consensus 94 a~~ 96 (325)
.|.
T Consensus 106 ~G~ 108 (176)
T d2fzwa2 106 IGN 108 (176)
T ss_dssp SCC
T ss_pred CCC
Confidence 873
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.10 E-value=0.007 Score=44.20 Aligned_cols=81 Identities=15% Similarity=0.061 Sum_probs=52.8
Q ss_pred hhcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceee--cCCchhHhhhCCCCEEEECC
Q 020476 17 QASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMI--AEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 17 ~~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~--~d~~~~~~~~~~~d~vi~~a 94 (325)
....++++|+|-|.-+|+.++..|+++|..|+........................++ ...+.+++....+|+||..+
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsav 105 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGV 105 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECC
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEcc
Confidence 3446799999999999999999999999999877654322111111100000111122 24566788888999999999
Q ss_pred CCC
Q 020476 95 GTP 97 (325)
Q Consensus 95 ~~~ 97 (325)
|.+
T Consensus 106 G~p 108 (171)
T d1edza1 106 PSE 108 (171)
T ss_dssp CCT
T ss_pred CCC
Confidence 865
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.10 E-value=0.001 Score=50.05 Aligned_cols=72 Identities=17% Similarity=0.049 Sum_probs=45.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCe-EEEEecCCCcccccCC-CCCccccCceeecCCchhH---hhh-CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQ-VRVLTRSRSKAELIFP-GKKTRFFPGVMIAEEPQWR---DCI-QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~-V~~~~r~~~~~~~~~~-~~~~~~~~~~d~~d~~~~~---~~~-~~~d~vi~~a 94 (325)
.+|||+||+|-+|...++.+...|.. |+++++++++...+.. ... ...+|..+++..+ ++. +++|+||++.
T Consensus 32 etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~ga---d~vi~~~~~~~~~~~~~~~~~GvDvv~D~v 108 (187)
T d1vj1a2 32 QTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGF---DAAVNYKTGNVAEQLREACPGGVDVYFDNV 108 (187)
T ss_dssp CEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCC---SEEEETTSSCHHHHHHHHCTTCEEEEEESS
T ss_pred CEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccc---eEEeeccchhHHHHHHHHhccCceEEEecC
Confidence 47999999999999999988778875 5555555444332221 111 1224444443332 222 3699999998
Q ss_pred C
Q 020476 95 G 95 (325)
Q Consensus 95 ~ 95 (325)
|
T Consensus 109 G 109 (187)
T d1vj1a2 109 G 109 (187)
T ss_dssp C
T ss_pred C
Confidence 7
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=96.08 E-value=0.0037 Score=49.08 Aligned_cols=34 Identities=32% Similarity=0.384 Sum_probs=31.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
.+||+|+|| |..|...+..|.++|++|+++.|..
T Consensus 6 ~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 6 QKRVVVLGS-GVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp SCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 458999995 9999999999999999999999864
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.08 E-value=0.0028 Score=45.81 Aligned_cols=67 Identities=18% Similarity=0.122 Sum_probs=50.9
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++++|+| .|.+|+.+++.|...|.+|++..+++...-+.. .|-.....+.+++...|+||-+.|-
T Consensus 23 ~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~----------~dG~~v~~~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 23 AGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA----------MEGYEVTTMDEACQEGNIFVTTTGC 89 (163)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----------HTTCEECCHHHHTTTCSEEEECSSC
T ss_pred cCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh----------cCceEeeehhhhhhhccEEEecCCC
Confidence 346899999 899999999999999999999999774422111 2222334577888899999999874
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=96.06 E-value=0.0028 Score=43.91 Aligned_cols=38 Identities=21% Similarity=0.242 Sum_probs=33.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
..+++++|+|| |++|-.++..|.+.|.+|+++.|++.-
T Consensus 23 ~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~~ 60 (123)
T d1dxla2 23 EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASEI 60 (123)
T ss_dssp SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEcccc
Confidence 34568999994 999999999999999999999997754
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=96.00 E-value=0.0039 Score=46.80 Aligned_cols=67 Identities=16% Similarity=0.117 Sum_probs=48.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.+++.|+| .|.||+.+++.|..-|.+|.++++.......... ......+++.++++.+|+|+.+...
T Consensus 47 g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~---------~~~~~~~~l~~ll~~sD~v~l~~pl 113 (191)
T d1gdha1 47 NKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS---------YQATFHDSLDSLLSVSQFFSLNAPS 113 (191)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH---------HTCEECSSHHHHHHHCSEEEECCCC
T ss_pred ccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc---------ccccccCCHHHHHhhCCeEEecCCC
Confidence 36899999 7999999999998889999999876543221110 1122345677888888988766654
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=95.93 E-value=0.0076 Score=44.48 Aligned_cols=76 Identities=18% Similarity=0.197 Sum_probs=44.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCc-cccc-CCCCC--ccccCc------eeecCCchhHhhhCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSK-AELI-FPGKK--TRFFPG------VMIAEEPQWRDCIQGST 88 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~-~~~~-~~~~~--~~~~~~------~d~~d~~~~~~~~~~~d 88 (325)
|-||.|-| .|.||+.++|.|.+++ .+|+++....+. .... ..... ...... ..+.-...+..+..++|
T Consensus 1 MIKVaING-fGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vD 79 (178)
T d1b7go1 1 MVNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSD 79 (178)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCS
T ss_pred CeEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCC
Confidence 44899999 8999999999999875 588887543322 1110 00000 000000 01111224455566899
Q ss_pred EEEECCCC
Q 020476 89 AVVNLAGT 96 (325)
Q Consensus 89 ~vi~~a~~ 96 (325)
+|+.|.|.
T Consensus 80 iViecTG~ 87 (178)
T d1b7go1 80 IVVDTTPN 87 (178)
T ss_dssp EEEECCST
T ss_pred EEEECCCC
Confidence 99999984
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=95.86 E-value=0.0098 Score=43.01 Aligned_cols=57 Identities=19% Similarity=0.330 Sum_probs=44.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
...++|+|+|-+..+|+.++..|.++|.+|+...... ..+.+.++++|+||.++|.+
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t-----------------------~~l~~~~~~ADivI~a~G~p 91 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT-----------------------KNLRHHVENADLLIVAVGKP 91 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC-----------------------SCHHHHHHHCSEEEECSCCT
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcccccccccc-----------------------chhHHHHhhhhHhhhhccCc
Confidence 4467999999999999999999999999998765322 13445567788888888765
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.80 E-value=0.018 Score=41.89 Aligned_cols=57 Identities=16% Similarity=0.235 Sum_probs=44.3
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
...++|+|+|-+..+|+.|+..|+++|.+|+....... .+.+.++++|+||.++|.+
T Consensus 37 l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~-----------------------~l~~~~~~aDivi~a~G~~ 93 (170)
T d1a4ia1 37 IAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA-----------------------HLDEEVNKGDILVVATGQP 93 (170)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS-----------------------SHHHHHTTCSEEEECCCCT
T ss_pred cccceEEEEecCCccchHHHHHHHhccCceEEEecccc-----------------------cHHHHHhhccchhhccccc
Confidence 35679999999999999999999999999998765332 2334566777777777754
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=95.68 E-value=0.00087 Score=48.56 Aligned_cols=63 Identities=16% Similarity=0.109 Sum_probs=37.8
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|-++| +|.+|+++++.|.+.++.+.+.+|++++...+..... ... ....++++.+|+||-|..
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~------~~~---~~~~~~~~~~DiVil~v~ 64 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYG------GKA---ATLEKHPELNGVVFVIVP 64 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTC------CCC---CSSCCCCC---CEEECSC
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccc------ccc---cchhhhhccCcEEEEecc
Confidence 45778 7999999999886644444678888877666544221 111 234466788999998864
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.66 E-value=0.0064 Score=45.29 Aligned_cols=65 Identities=25% Similarity=0.177 Sum_probs=46.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.+++.|+| .|.||+.+++.+..-|.+|.+.++...+...... .+ ....+.++++++|+|+.+...
T Consensus 44 ~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~~--------~~---~~~~l~ell~~sDiv~~~~Pl 108 (184)
T d1ygya1 44 GKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQL--------GI---ELLSLDDLLARADFISVHLPK 108 (184)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHHH--------TC---EECCHHHHHHHCSEEEECCCC
T ss_pred ceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhhc--------Cc---eeccHHHHHhhCCEEEEcCCC
Confidence 35889988 7999999999998889999999987654322111 01 223567778888888877654
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=95.64 E-value=0.0067 Score=37.82 Aligned_cols=37 Identities=27% Similarity=0.207 Sum_probs=32.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
||+|.|+| +|.+|+-++..-.+-|++|.+++-+++..
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~p 37 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEPA 37 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence 46899999 69999999999999999999999766543
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=95.63 E-value=0.0091 Score=41.80 Aligned_cols=36 Identities=22% Similarity=0.343 Sum_probs=32.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
.++|+|+| .|++|..++..|.+.|.+|+.+.+.+.-
T Consensus 35 ~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~~ 70 (133)
T d1q1ra2 35 DNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAARV 70 (133)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCEEEEEC-CchHHHHHHHHHHhhCcceeeeeecccc
Confidence 46899999 5999999999999999999999987643
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.62 E-value=0.05 Score=39.55 Aligned_cols=109 Identities=9% Similarity=0.025 Sum_probs=58.9
Q ss_pred CCeEEEECC-CchHHHHHHHHHHhCC----CeEEEEecCCCcc--cccCCC---CCccccCceeecCCchhHhhhCCCCE
Q 020476 20 QMTVSVTGA-TGFIGRRLVQRLQADN----HQVRVLTRSRSKA--ELIFPG---KKTRFFPGVMIAEEPQWRDCIQGSTA 89 (325)
Q Consensus 20 ~~~ilI~Ga-tG~iG~~l~~~L~~~g----~~V~~~~r~~~~~--~~~~~~---~~~~~~~~~d~~d~~~~~~~~~~~d~ 89 (325)
+|||.|+|| +.+.+..++..++... .++..++.+++.. +..... ..........+...++..+.++++|+
T Consensus 1 k~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~~~~~~~~~~~~~~td~~~al~gaDv 80 (169)
T d1s6ya1 1 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRMVEKAGVPIEIHLTLDRRRALDGADF 80 (169)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCCEEEEESCHHHHHTTCSE
T ss_pred CcEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHHHHhcCCCceeeecCCchhhcCCCCE
Confidence 479999997 3344555555444332 3888888876542 111100 00000112344455566778899999
Q ss_pred EEECCCCCCCCCCChh-----------------hHHHHHHHhhHHHHHHHHHHhcC
Q 020476 90 VVNLAGTPIGTRWSSE-----------------IKKEIKESRIRVTSKVVDLINES 128 (325)
Q Consensus 90 vi~~a~~~~~~~~~~~-----------------~~~~~~~~nv~~~~~ll~~~~~~ 128 (325)
||..|+......+..+ .......-|+...+.+++.+.+.
T Consensus 81 Vv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~ 136 (169)
T d1s6ya1 81 VTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEEL 136 (169)
T ss_dssp EEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhc
Confidence 9999986421100000 00011235777788888888883
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.61 E-value=0.028 Score=36.62 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=45.8
Q ss_pred CCeEEEECCCchHH-HHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIG-RRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG-~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++|.++|..| +| +.|++.|.++|++|.+.++..+........ .++.+.....- +.++++|.||...+.+
T Consensus 8 ~~~ihfiGigG-~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~------~Gi~v~~g~~~-~~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 8 VQQIHFIGIGG-AGMSGIAEILLNEGYQISGSDIADGVVTQRLAQ------AGAKIYIGHAE-EHIEGASVVVVSSAIK 78 (96)
T ss_dssp CCEEEEETTTS-TTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHH------TTCEEEESCCG-GGGTTCSEEEECTTSC
T ss_pred CCEEEEEEECH-HHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHH------CCCeEEECCcc-ccCCCCCEEEECCCcC
Confidence 46899998544 44 778999999999999999976543322221 12333322222 2347899999988764
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.58 E-value=0.0081 Score=45.26 Aligned_cols=67 Identities=16% Similarity=0.144 Sum_probs=47.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-CCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-QGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-~~~d~vi~~a~~ 96 (325)
..+||+|-| .|.+|+++++.|.+.|.+|++.+.+......... .+.+..+.+. ++ .++|+++-||..
T Consensus 26 ~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~~-------~g~~~~~~~~---~~~~~~DI~iPcA~~ 93 (201)
T d1c1da1 26 DGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAHAVA-------LGHTAVALED---VLSTPCDVFAPCAMG 93 (201)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------TTCEECCGGG---GGGCCCSEEEECSCS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHHHHh-------hcccccCccc---cccccceeeeccccc
Confidence 347899998 8999999999999999999988876544322211 1234444443 34 389999999853
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.49 E-value=0.014 Score=42.84 Aligned_cols=73 Identities=15% Similarity=0.061 Sum_probs=52.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCcee----------------------ecCCch
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVM----------------------IAEEPQ 79 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d----------------------~~d~~~ 79 (325)
+|+|+|| |-.|.+-++.....|.+|++++.++...+.+...... +...+ ....+.
T Consensus 31 ~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~l~~~--~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~~ 107 (183)
T d1l7da1 31 RVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVESLGGK--FITVDDEAMKTAETAGGYAKEMGEEFRKKQAEA 107 (183)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHHTTCE--ECCC-----------------------CCHHHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhhcc--eEEEeccccccccccccchhhcCHHHHHHHHHH
Confidence 8999995 9999999999999999999999988765554432110 11000 012345
Q ss_pred hHhhhCCCCEEEECCCCC
Q 020476 80 WRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 80 ~~~~~~~~d~vi~~a~~~ 97 (325)
+.+.++++|+||-.+-.+
T Consensus 108 l~~~l~~aDlVI~talip 125 (183)
T d1l7da1 108 VLKELVKTDIAITTALIP 125 (183)
T ss_dssp HHHHHTTCSEEEECCCCT
T ss_pred HHHHHHhhhhheeeeecC
Confidence 666778999999998765
|
| >d2gv8a2 c.3.1.5 (A:181-287) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=95.49 E-value=0.0086 Score=40.14 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=29.4
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..++|+|+| +|.-|..++..|+....+|+...|+..
T Consensus 31 ~gK~VlVVG-~g~Sa~dia~~l~~~ak~v~~~~~r~~ 66 (107)
T d2gv8a2 31 VGESVLVVG-GASSANDLVRHLTPVAKHPIYQSLLGG 66 (107)
T ss_dssp TTCCEEEEC-SSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCCeEEEEC-CCCCHHHHHHHHHHhcCEEEEEEecCc
Confidence 457999999 699999999999888777766666554
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=95.48 E-value=0.042 Score=42.72 Aligned_cols=34 Identities=21% Similarity=0.236 Sum_probs=29.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
..||+|+| .|-+|++++..|+..|. ++++++.+.
T Consensus 30 ~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~ 64 (247)
T d1jw9b_ 30 DSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDT 64 (247)
T ss_dssp HCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcc
Confidence 45999999 58899999999999996 788887653
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.46 E-value=0.019 Score=38.84 Aligned_cols=73 Identities=8% Similarity=0.027 Sum_probs=50.1
Q ss_pred CCeEEEECC----------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CC
Q 020476 20 QMTVSVTGA----------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GS 87 (325)
Q Consensus 20 ~~~ilI~Ga----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~ 87 (325)
.+||||+|+ .-|.+.+.++.|.+.|++++.+..++........... ..-++-...+.+.++++ ++
T Consensus 4 ~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVstd~d~aD---~lYfeplt~e~v~~Ii~~E~p 80 (121)
T d1a9xa4 4 REKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVSTDYDTSD---RLYFEPVTLEDVLEIVRIEKP 80 (121)
T ss_dssp SCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTTSTTSSS---EEECCCCSHHHHHHHHHHHCC
T ss_pred CCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhcChhhcC---ceEEccCCHHHHHHHHHHhCC
Confidence 469999997 3378999999999999999999998877554333211 00112224556666653 79
Q ss_pred CEEEECCC
Q 020476 88 TAVVNLAG 95 (325)
Q Consensus 88 d~vi~~a~ 95 (325)
|.|+-..|
T Consensus 81 ~~ii~~~G 88 (121)
T d1a9xa4 81 KGVIVQYG 88 (121)
T ss_dssp SEEECSSS
T ss_pred CEEEeehh
Confidence 98886554
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=95.44 E-value=0.0051 Score=47.38 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=48.8
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
..++|+|-| .|.+|+++++.|.+.|.+|++.+.+......... ..+.+..+++.+-. .+||+++=||-.
T Consensus 38 ~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~------~~g~~~~~~~~~~~--~~cDIl~PcA~~ 106 (230)
T d1leha1 38 EGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVA------EEGADAVAPNAIYG--VTCDIFAPCALG 106 (230)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH------HHCCEECCGGGTTT--CCCSEEEECSCS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHH------hcCCcccCCccccc--ccccEecccccc
Confidence 356899999 7999999999999999999988765543322221 22344445544322 389999999964
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=95.39 E-value=0.0083 Score=44.85 Aligned_cols=36 Identities=19% Similarity=0.165 Sum_probs=30.7
Q ss_pred eEEE-ECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 22 TVSV-TGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 22 ~ilI-~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
+++| .||+|-+|...++.....|.+|++++|+.+..
T Consensus 31 ~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~ 67 (189)
T d1gu7a2 31 DWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNL 67 (189)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTH
T ss_pred EEEEEeCCCchHHHHHHHHHhhcCCeEEEEEeccccc
Confidence 6777 48999999999998888899999999877653
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=95.36 E-value=0.012 Score=43.94 Aligned_cols=36 Identities=11% Similarity=0.135 Sum_probs=31.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 55 (325)
..+||+|+|| |..|-..+..|.+.|+ +|+++.|++.
T Consensus 3 ~~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 3 YSAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GGCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 3579999995 9999999999999998 5999998653
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.34 E-value=0.0078 Score=43.91 Aligned_cols=76 Identities=9% Similarity=0.111 Sum_probs=45.0
Q ss_pred CeEEEECCCchHHHH-HHHHHHhC-C----CeEEEEecCCCcccccCC---CCCccccCceeecCCchhHhhhCCCCEEE
Q 020476 21 MTVSVTGATGFIGRR-LVQRLQAD-N----HQVRVLTRSRSKAELIFP---GKKTRFFPGVMIAEEPQWRDCIQGSTAVV 91 (325)
Q Consensus 21 ~~ilI~GatG~iG~~-l~~~L~~~-g----~~V~~~~r~~~~~~~~~~---~~~~~~~~~~d~~d~~~~~~~~~~~d~vi 91 (325)
.||.|+||.+ +|.. ++..|+.+ . .+++.++.++++...... ...........+.-..+..++++++|+||
T Consensus 4 ~KI~iIGaGs-v~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~eal~~AD~Vv 82 (167)
T d1u8xx1 4 FSIVIAGGGS-TFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATTDPEEAFTDVDFVM 82 (167)
T ss_dssp EEEEEECTTS-SSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEESCHHHHHSSCSEEE
T ss_pred ceEEEECCCh-hhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecCChhhccCCCCEEE
Confidence 4899999844 4543 44455543 1 389999988765432111 00000011223334456778899999999
Q ss_pred ECCCCC
Q 020476 92 NLAGTP 97 (325)
Q Consensus 92 ~~a~~~ 97 (325)
..|+..
T Consensus 83 itag~~ 88 (167)
T d1u8xx1 83 AHIRVG 88 (167)
T ss_dssp ECCCTT
T ss_pred ECCCcC
Confidence 999864
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=95.33 E-value=0.0012 Score=49.08 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=49.1
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccc-cCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRF-FPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~-~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
...++|+|+| +|..+++++..|.+.| +|+++.|+.++...+........ .......+.+.+.....++|++|++...
T Consensus 16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~dliIn~tp~ 93 (177)
T d1nvta1 16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSGLDVDLDGVDIIINATPI 93 (177)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEECTTCCCTTCCEEEECSCT
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhhhhhccchhhhhccCCcc
Confidence 3567999999 5889999999997766 99999998776544322100000 0001112233444455689999999764
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.28 E-value=0.0089 Score=43.59 Aligned_cols=71 Identities=24% Similarity=0.082 Sum_probs=46.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCc---hhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~---~~~~~~~~~d~vi~~a~ 95 (325)
.+|+|.|+ |-+|...++.+...|.+|+++++++++.......+. ...++..+.+ .+.+..++.|.+|.+++
T Consensus 29 ~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k~~Ga---~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 102 (168)
T d1rjwa2 29 EWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKELGA---DLVVNPLKEDAAKFMKEKVGGVHAAVVTAV 102 (168)
T ss_dssp CEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTTC---SEEECTTTSCHHHHHHHHHSSEEEEEESSC
T ss_pred CEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhhhcCc---ceecccccchhhhhcccccCCCceEEeecC
Confidence 48999975 889999999998889999999988776544433221 1112333333 23333456777777765
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=95.26 E-value=0.011 Score=40.93 Aligned_cols=36 Identities=14% Similarity=0.194 Sum_probs=32.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..++++|+|| |+||..++..|.+.|.+|+.+.|.+.
T Consensus 25 ~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~~ 60 (125)
T d1ojta2 25 VPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMDG 60 (125)
T ss_dssp CCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred cCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeecc
Confidence 3568999994 99999999999999999999998764
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=95.21 E-value=0.016 Score=42.53 Aligned_cols=72 Identities=14% Similarity=0.061 Sum_probs=44.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCch-hHhh---h--CCCCEEEEC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQ-WRDC---I--QGSTAVVNL 93 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~-~~~~---~--~~~d~vi~~ 93 (325)
.+|+|+|+. -+|...+..+...+ ..|+++++++++.+...+... -..+|..+.+. ..+. . .++|+++.+
T Consensus 30 ~~VlI~G~G-g~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~~~GA---d~~in~~~~~~~~~~~~~~~~~~G~d~vid~ 105 (175)
T d1cdoa2 30 STCAVFGLG-AVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFGA---TDFVNPNDHSEPISQVLSKMTNGGVDFSLEC 105 (175)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHHTTC---CEEECGGGCSSCHHHHHHHHHTSCBSEEEEC
T ss_pred CEEEEEecC-CccchHHHHHHHHhhchheeecchHHHHHHHHHcCC---cEEEcCCCcchhHHHHHHhhccCCcceeeee
Confidence 489999974 46766666676665 589999988877554443322 12233333322 2222 2 379999999
Q ss_pred CCC
Q 020476 94 AGT 96 (325)
Q Consensus 94 a~~ 96 (325)
.|.
T Consensus 106 ~G~ 108 (175)
T d1cdoa2 106 VGN 108 (175)
T ss_dssp SCC
T ss_pred cCC
Confidence 883
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.19 E-value=0.02 Score=41.92 Aligned_cols=71 Identities=20% Similarity=0.195 Sum_probs=44.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhh-----CCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCI-----QGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~-----~~~d~vi~~a 94 (325)
.+|+|.|+ |.+|...++.+...| ..|++.++++.+.+....... ...+|. +.+.+.+.. +++|+||.++
T Consensus 34 ~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~~ga---~~~i~~-~~~~~~~~~~~~~~~g~d~vid~~ 108 (172)
T d1h2ba2 34 AYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAERLGA---DHVVDA-RRDPVKQVMELTRGRGVNVAMDFV 108 (172)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHHTTC---SEEEET-TSCHHHHHHHHTTTCCEEEEEESS
T ss_pred CEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhhccc---ceeecC-cccHHHHHHHhhCCCCceEEEEec
Confidence 47999985 999999998887777 477777877665444333221 111222 233333332 2699999999
Q ss_pred CC
Q 020476 95 GT 96 (325)
Q Consensus 95 ~~ 96 (325)
|.
T Consensus 109 g~ 110 (172)
T d1h2ba2 109 GS 110 (172)
T ss_dssp CC
T ss_pred Cc
Confidence 83
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=95.18 E-value=0.016 Score=39.61 Aligned_cols=35 Identities=20% Similarity=0.155 Sum_probs=31.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
.++|+|+| .|++|..++..|.+.|.+|+.+.|.+.
T Consensus 22 ~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 22 GSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence 36899999 599999999999999999999999764
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=95.13 E-value=0.015 Score=39.88 Aligned_cols=73 Identities=14% Similarity=0.077 Sum_probs=51.5
Q ss_pred CCeEEEECC----------CchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CC
Q 020476 20 QMTVSVTGA----------TGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GS 87 (325)
Q Consensus 20 ~~~ilI~Ga----------tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~ 87 (325)
.+||||+|+ .-|.+.+.+++|.+.|++++.+..++........... ..-.+-...+.+.++++ ++
T Consensus 7 ~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd~d~aD---~lYfePlt~e~v~~Ii~~E~p 83 (127)
T d1a9xa3 7 IKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTDPEMAD---ATYIEPIHWEVVRKIIEKERP 83 (127)
T ss_dssp CCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGCGGGSS---EEECSCCCHHHHHHHHHHHCC
T ss_pred CCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcChhhcc---eeeeecCCHHHHHHHHHHhCc
Confidence 469999998 4478899999999999999999998877543332211 01122235667777774 89
Q ss_pred CEEEECCC
Q 020476 88 TAVVNLAG 95 (325)
Q Consensus 88 d~vi~~a~ 95 (325)
|.|+-..|
T Consensus 84 d~il~~~G 91 (127)
T d1a9xa3 84 DAVLPTMG 91 (127)
T ss_dssp SEEECSSS
T ss_pred CCeEEEee
Confidence 99986655
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=95.08 E-value=0.033 Score=40.58 Aligned_cols=32 Identities=19% Similarity=0.460 Sum_probs=26.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEec
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR 52 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r 52 (325)
|+||.|-| .|.||+.+++.|.+++ .+|+++.-
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd 33 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK 33 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence 56899998 8999999999998876 47776654
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=95.00 E-value=0.013 Score=41.75 Aligned_cols=35 Identities=20% Similarity=0.378 Sum_probs=29.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~ 54 (325)
|++|.|+|+||-||...+.-+.+. .++|.+++-..
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 568999999999999999988776 36888887543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=94.99 E-value=0.016 Score=45.37 Aligned_cols=36 Identities=22% Similarity=0.253 Sum_probs=32.3
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
.+||+|+|| |..|..++..|.++|++|+++.|++..
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~~~ 39 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSPQP 39 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCCC
Confidence 469999995 999999999999999999999987643
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.91 E-value=0.022 Score=41.92 Aligned_cols=37 Identities=22% Similarity=0.312 Sum_probs=33.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
..+||+|+| +|..|-..+..|.++||+|+++.+.+.-
T Consensus 42 ~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~~~ 78 (179)
T d1ps9a3 42 QKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHSEI 78 (179)
T ss_dssp SCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccCcc
Confidence 457999999 5999999999999999999999997644
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=94.86 E-value=0.018 Score=46.74 Aligned_cols=35 Identities=23% Similarity=0.502 Sum_probs=31.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
++||+|+| +|.-|...+..|.+.|++|.++-++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 57999999 599999999999999999999998774
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=94.78 E-value=0.015 Score=45.92 Aligned_cols=31 Identities=23% Similarity=0.432 Sum_probs=29.1
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
|+|+|| |..|..++.+|+++|++|+++.+..
T Consensus 7 vvIIGa-Gi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIGG-GIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 999995 9999999999999999999999864
|
| >d1vkza2 c.30.1.1 (A:4-93) Glycinamide ribonucleotide synthetase (GAR-syn), N-domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide synthetase (GAR-syn), N-domain species: Thermotoga maritima [TaxId: 2336]
Probab=94.76 E-value=0.077 Score=33.77 Aligned_cols=32 Identities=13% Similarity=0.160 Sum_probs=27.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
|||||+| +|-=-.+|+..|.++.++|+++--+
T Consensus 1 MkVLviG-sGgREHAia~~l~~s~~~v~~~pGN 32 (90)
T d1vkza2 1 VRVHILG-SGGREHAIGWAFAKQGYEVHFYPGN 32 (90)
T ss_dssp CEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEEC-CCHHHHHHHHHHhcCCCeEEEecCC
Confidence 7999999 6777889999999989999988543
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=94.64 E-value=0.0086 Score=41.63 Aligned_cols=70 Identities=14% Similarity=0.119 Sum_probs=50.2
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhh-hCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDC-IQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~-~~~~d~vi~~a~ 95 (325)
+.|+|+| .|-+|..+++.|. ++.|.++..++........... .+..+|..+++.+.++ +++++.++-+..
T Consensus 1 kHivI~G-~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~~~~~--~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~ 71 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLRELR--GSEVFVLAEDENVRKKVLRSGA--NFVHGDPTRVSDLEKANVRGARAVIVNLE 71 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTSC--GGGEEEEESCTTHHHHHHHTTC--EEEESCTTSHHHHHHTTCTTCSEEEECCS
T ss_pred CEEEEEC-CCHHHHHHHHHHc--CCCCEEEEcchHHHHHHHhcCc--cccccccCCHHHHHHhhhhcCcEEEEecc
Confidence 3688888 5999999999984 6778888888776544332211 1345688888888765 468999998753
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.64 E-value=0.018 Score=43.18 Aligned_cols=33 Identities=21% Similarity=0.274 Sum_probs=28.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR 54 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~ 54 (325)
|||+|+|| |++|-.++..|.+. +.+|+.+.|.+
T Consensus 1 ~KVvIIGg-G~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLGS-SHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEECS-SHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEECC-cHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 79999995 99999999999876 45899888765
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=94.63 E-value=0.0061 Score=44.03 Aligned_cols=71 Identities=13% Similarity=0.106 Sum_probs=38.1
Q ss_pred CCeEEEECCCchHHHHHH-HHHHhCC-CeEEEE-ecCCCccc-ccCCCCCccccCceeecCCchhHhh--hCCCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRRLV-QRLQADN-HQVRVL-TRSRSKAE-LIFPGKKTRFFPGVMIAEEPQWRDC--IQGSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~-~~L~~~g-~~V~~~-~r~~~~~~-~~~~~~~~~~~~~~d~~d~~~~~~~--~~~~d~vi~~ 93 (325)
++||.|+| +|.+|+.+. +.|.+.. .+++++ +|++.... ...... .........+.+.+. +.++|+||.+
T Consensus 4 kirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~~~----~i~~~~~~~d~l~~~~~~~~iDiVf~A 78 (157)
T d1nvmb1 4 KLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRM----GVTTTYAGVEGLIKLPEFADIDFVFDA 78 (157)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHT----TCCEESSHHHHHHHSGGGGGEEEEEEC
T ss_pred CcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhhhc----CCcccccceeeeeecccccccCEEEEc
Confidence 35899999 899998754 5554443 477776 45544321 111110 001111123344333 2479999998
Q ss_pred CC
Q 020476 94 AG 95 (325)
Q Consensus 94 a~ 95 (325)
..
T Consensus 79 Tp 80 (157)
T d1nvmb1 79 TS 80 (157)
T ss_dssp SC
T ss_pred CC
Confidence 53
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=94.63 E-value=0.024 Score=42.48 Aligned_cols=73 Identities=18% Similarity=0.070 Sum_probs=45.6
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCCcccccCCCCCccccCceeecCCc---hhHhhhC--CCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEP---QWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~---~~~~~~~--~~d~vi~~a 94 (325)
.+|+|+|+ |-+|...++.+...|. .|+++++++++.+....... ...++-.+.+ .+.++.. ++|++|.+.
T Consensus 27 ~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~~Ga---~~~~~~~~~~~~~~i~~~t~g~g~D~vid~v 102 (195)
T d1kola2 27 STVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKAQGF---EIADLSLDTPLHEQIAALLGEPEVDCAVDAV 102 (195)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTTC---EEEETTSSSCHHHHHHHHHSSSCEEEEEECC
T ss_pred CEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhhccc---cEEEeCCCcCHHHHHHHHhCCCCcEEEEECc
Confidence 48999985 9999888887766775 78888887765443332211 1111222332 2333333 689999999
Q ss_pred CCC
Q 020476 95 GTP 97 (325)
Q Consensus 95 ~~~ 97 (325)
|..
T Consensus 103 G~~ 105 (195)
T d1kola2 103 GFE 105 (195)
T ss_dssp CTT
T ss_pred ccc
Confidence 843
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=94.56 E-value=0.018 Score=41.02 Aligned_cols=35 Identities=40% Similarity=0.502 Sum_probs=29.5
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~ 54 (325)
+++|.|+|+||-||...++-+.+. .++|.+++-..
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 578999999999999999988775 47888887544
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=94.55 E-value=0.018 Score=46.02 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=31.1
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
|+|+|+|| |.-|-..+..|.++|++|+++-+++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~~ 34 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSAR 34 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 78999995 99999999999999999999988654
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=94.53 E-value=0.0067 Score=44.14 Aligned_cols=76 Identities=12% Similarity=0.034 Sum_probs=44.0
Q ss_pred CeEEEECCCchHHHHHHH-HHHhC-----CCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECC
Q 020476 21 MTVSVTGATGFIGRRLVQ-RLQAD-----NHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLA 94 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~-~L~~~-----g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a 94 (325)
|||.|+|| |-+|...+- .|++. ..++..++.++++................++.-.....+.++++|+||..|
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~~~~~~~~~t~~~~~~l~~aDvVVita 79 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLVKDRFKVLISDTFEGAVVDAKYVIFQF 79 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHHTTSSEEEECSSHHHHHTTCSEEEECC
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhhccCceEEEecCcccccCCCCEEEEec
Confidence 79999998 546655553 33321 358999998776543211100000011122222344567889999999999
Q ss_pred CCC
Q 020476 95 GTP 97 (325)
Q Consensus 95 ~~~ 97 (325)
+..
T Consensus 80 ~~~ 82 (162)
T d1up7a1 80 RPG 82 (162)
T ss_dssp CTT
T ss_pred ccC
Confidence 863
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=94.33 E-value=0.023 Score=41.54 Aligned_cols=34 Identities=18% Similarity=0.273 Sum_probs=29.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC--eEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH--QVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~--~V~~~~r~~ 54 (325)
.+||+|+|| |+.|-.++..|.+.+. +|+++.+.+
T Consensus 2 gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 479999995 9999999999998874 788887765
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.30 E-value=0.017 Score=41.38 Aligned_cols=67 Identities=12% Similarity=0.129 Sum_probs=50.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGTP 97 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~~ 97 (325)
.++++|.| -|.+|+-+++.|...|-+|+++..+|-..-+.. ..+.. ...+.++++..|++|-+.|..
T Consensus 23 Gk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-------mdGf~---v~~~~~a~~~aDi~vTaTGn~ 89 (163)
T d1v8ba1 23 GKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-------MEGFN---VVTLDEIVDKGDFFITCTGNV 89 (163)
T ss_dssp TSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-------TTTCE---ECCHHHHTTTCSEEEECCSSS
T ss_pred CCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-------hcCCc---cCchhHccccCcEEEEcCCCC
Confidence 46888888 899999999999999999999998874422211 22222 345678889999999998853
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.84 E-value=0.037 Score=39.69 Aligned_cols=62 Identities=16% Similarity=0.099 Sum_probs=40.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
||.++| .|.+|..+++.|++.|+.| ...|+.++......... ......+.+.++|+++-+..
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~i~~~~ 63 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQEEFG----------SEAVPLERVAEARVIFTCLP 63 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHHHHC----------CEECCGGGGGGCSEEEECCS
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHHHcC----------CcccccccccceeEEEeccc
Confidence 799999 6999999999999988866 56776655433322110 11122244456788887643
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.64 E-value=0.21 Score=41.98 Aligned_cols=33 Identities=30% Similarity=0.440 Sum_probs=28.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
+||||+|+ |.+|+++++.|+..|. ++++++.+.
T Consensus 38 ~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~ 71 (426)
T d1yovb1 38 CKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDT 71 (426)
T ss_dssp CCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCB
T ss_pred CeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 58999996 6699999999999996 788888753
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=93.59 E-value=0.052 Score=38.75 Aligned_cols=35 Identities=20% Similarity=0.353 Sum_probs=29.0
Q ss_pred CeEEEEC-CCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 21 MTVSVTG-ATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~G-atG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
++++|++ +.||+|..++..|.+.|.+|+.+.+.+.
T Consensus 40 ~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 40 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3566652 3599999999999999999999998763
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=93.58 E-value=0.049 Score=36.80 Aligned_cols=37 Identities=19% Similarity=0.262 Sum_probs=29.6
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHh---CCCeEEEEecCCC
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS 55 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 55 (325)
..+++++|+|| |++|-.++..|.+ .|.+|+.+.|++.
T Consensus 16 ~~p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 16 EAPKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp SCCSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred ccCCeEEEECC-ChHHHHHHHHhHhhcccccccceeccccc
Confidence 34579999995 9999999976654 4789999998764
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=93.52 E-value=0.0056 Score=47.47 Aligned_cols=27 Identities=37% Similarity=0.469 Sum_probs=23.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEE
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVR 48 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~ 48 (325)
|||+|+|| |.+|...+.+|+++|++|+
T Consensus 1 mkV~VIGa-Gi~GlstA~~L~~~G~~v~ 27 (246)
T d1kifa1 1 MRVVVIGA-GVIGLSTALCIHERYHSVL 27 (246)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHHTTTS
T ss_pred CEEEEECc-hHHHHHHHHHHHHCCCCce
Confidence 79999995 9999999999999997543
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.37 E-value=0.034 Score=44.24 Aligned_cols=34 Identities=29% Similarity=0.308 Sum_probs=30.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
-+|+|+|| |-.|..++..|.+.|++|.++.|+++
T Consensus 3 ~~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 3 TQVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp CSEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CCEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 37999995 99999999999999999999998764
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.34 E-value=0.035 Score=44.54 Aligned_cols=35 Identities=20% Similarity=0.357 Sum_probs=31.1
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
|..|+|+| +|.-|..+++.|++.|++|.++-++..
T Consensus 1 M~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 1 MYDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred CccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 34799999 599999999999999999999988764
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=93.31 E-value=0.06 Score=42.22 Aligned_cols=35 Identities=23% Similarity=0.342 Sum_probs=30.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC-CeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN-HQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r~~~ 55 (325)
+++|+|+|| |..|..++..|.+.| ++|.++-|++.
T Consensus 1 ~~~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 1 PIDILIAGA-GIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 369999995 999999999999999 58999988764
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=93.29 E-value=0.12 Score=38.76 Aligned_cols=31 Identities=16% Similarity=0.105 Sum_probs=26.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEec
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR 52 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 52 (325)
|||+++| ++..|..+++.|.+.|++|.++.-
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vvt 31 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIFT 31 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEEc
Confidence 7999997 566899999999999999977654
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=93.19 E-value=0.051 Score=43.26 Aligned_cols=34 Identities=24% Similarity=0.325 Sum_probs=30.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
|||+|+| +|.-|-..+.+|.+.|++|+++.+++.
T Consensus 2 KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~~ 35 (373)
T d1seza1 2 KRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEGK 35 (373)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 6999999 599999999999999999999987653
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=93.10 E-value=0.058 Score=43.88 Aligned_cols=36 Identities=28% Similarity=0.360 Sum_probs=30.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSK 56 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~ 56 (325)
++||+|+|| |.-|-..+..|++.| ++|+++-|+..-
T Consensus 4 ~KrVaIIGa-G~sGl~~A~~L~~~~~~~~v~vfEk~~~i 41 (335)
T d2gv8a1 4 IRKIAIIGA-GPSGLVTAKALLAEKAFDQVTLFERRGSP 41 (335)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCCSEEEEECSSSSS
T ss_pred CCeEEEECc-CHHHHHHHHHHHHhCCCCCEEEEECCCCC
Confidence 468999995 999999999998876 699999998643
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.04 E-value=0.1 Score=37.54 Aligned_cols=67 Identities=19% Similarity=0.217 Sum_probs=41.8
Q ss_pred CCeEEEECCCchHHHH-HHHHHHhC-CCeEEEEe-cCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRR-LVQRLQAD-NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~-l~~~L~~~-g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
+|||.|+| +|.+|.. .++.|... +.+++++. +++.+....... + ++++. +.+.++.+++|+|+-+..
T Consensus 1 Kiri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~-----~-~~~~~--~~~~~l~~~~D~V~I~tp 70 (164)
T d1tlta1 1 KLRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICES-----W-RIPYA--DSLSSLAASCDAVFVHSS 70 (164)
T ss_dssp CEEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHH-----H-TCCBC--SSHHHHHTTCSEEEECSC
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhc-----c-ccccc--ccchhhhhhccccccccc
Confidence 36999999 6999975 56666654 56776654 555544333221 1 23333 345566688999997753
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=93.00 E-value=0.23 Score=34.37 Aligned_cols=64 Identities=13% Similarity=0.022 Sum_probs=42.3
Q ss_pred CCeEEEECCC---chHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGAT---GFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~Gat---G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
.++|.|+||| +-.|..+++.|.+.|++++.+.-++... .. .+ ..-..++.++-..+|.|+-+..
T Consensus 13 pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~~~~~-~i---------~g--~~~~~~l~~i~~~iD~v~v~~p 79 (136)
T d1iuka_ 13 AKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPRFQGE-EL---------FG--EEAVASLLDLKEPVDILDVFRP 79 (136)
T ss_dssp CCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGGGTTS-EE---------TT--EECBSSGGGCCSCCSEEEECSC
T ss_pred CCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEeccccc-ee---------ec--eecccchhhccCCCceEEEecc
Confidence 4689999998 5799999999999999998776443211 11 11 1122234444457898888753
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=92.98 E-value=0.052 Score=43.37 Aligned_cols=33 Identities=24% Similarity=0.488 Sum_probs=29.4
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
.+|+|+|| |.+|..++.+|+++|. +|+++.|+.
T Consensus 2 ~dViIIGa-Gi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 2 PRIVIIGA-GIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CCEEEECc-CHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 47999995 9999999999999995 799999874
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=92.95 E-value=0.24 Score=37.06 Aligned_cols=100 Identities=19% Similarity=0.210 Sum_probs=59.9
Q ss_pred HHhhhcCCeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCC------CC--ccccCceeec-------
Q 020476 14 RLLQASQMTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG------KK--TRFFPGVMIA------- 75 (325)
Q Consensus 14 ~~~~~~~~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~------~~--~~~~~~~d~~------- 75 (325)
..++....||.|+| -|.-|..++..|.+.+. +.+++.-+.......... .. .....+.|..
T Consensus 9 ~~~~~~~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~~~~ki~ig~~~t~g~Gag~~p~~g~~aa~ 87 (209)
T d2vapa1 9 EYLQQTKAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIRTKADKKILIGKKLTRGLGAGGNPKIGEEAAK 87 (209)
T ss_dssp HHHHTTCCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHTSCCSEEEECCTTTTTTBCCTTCHHHHHHHHH
T ss_pred HHHhccCCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhcCCcchhcccccccccccccccchHHHHHHHH
Confidence 34455667999999 69999999999998864 445555432222111100 00 0000011111
Q ss_pred -CCchhHhhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 76 -EEPQWRDCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 76 -d~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+.+.+.+.++++|.||-+||....+ -..++--+.+.+++
T Consensus 88 e~~~~I~~~l~~~d~vfi~AGlGGGT-------------Gsgaapvia~~ake 127 (209)
T d2vapa1 88 ESAEEIKAAIQDSDMVFITCGLGGGT-------------GTGSAPVVAEISKK 127 (209)
T ss_dssp HTHHHHHHHHTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCEEEEEEeCCCCc-------------cccHHHHHHHHHHH
Confidence 4557888889999999999976432 23334457788888
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=92.91 E-value=0.11 Score=41.04 Aligned_cols=33 Identities=21% Similarity=0.248 Sum_probs=29.4
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
.++|+|-| .|.+|+++++.|.+.|.+|++++-+
T Consensus 36 gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD~ 68 (293)
T d1hwxa1 36 DKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGES 68 (293)
T ss_dssp TCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEcc
Confidence 46899999 7999999999999999999988753
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=92.83 E-value=0.053 Score=43.79 Aligned_cols=36 Identities=31% Similarity=0.408 Sum_probs=32.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..+||+|+| +|..|-..+..|.++|++|+++.+++.
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~~ 64 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASER 64 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 456899999 599999999999999999999988664
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=92.79 E-value=0.058 Score=38.80 Aligned_cols=31 Identities=26% Similarity=0.394 Sum_probs=26.8
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
||+|+|| |++|..++..|.+ +.+|+++.|.+
T Consensus 2 rVvIIGg-G~~G~e~A~~l~~-~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVGN-GPGGFELAKQLSQ-TYEVTVIDKEP 32 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHTT-TSEEEEECSSS
T ss_pred eEEEECC-cHHHHHHHHHHHc-CCCEEEEeccc
Confidence 8999995 9999999998864 78999998754
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=92.76 E-value=0.32 Score=37.34 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=30.1
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
..++|+|-| .|.+|+++++.|.+.|.+|++++-.
T Consensus 30 ~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 30 EGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeecc
Confidence 457999998 8999999999999999999988753
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=92.67 E-value=0.085 Score=40.38 Aligned_cols=37 Identities=19% Similarity=0.236 Sum_probs=32.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
..++|+|+|| |..|-..+..|.++|++|+++.++..-
T Consensus 48 ~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~~ 84 (233)
T d1djqa3 48 NKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEKI 84 (233)
T ss_dssp SCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred CCceEEEEcc-cHHHHHHHHHHHHhccceeeEeecccc
Confidence 4568999995 999999999999999999999876643
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=92.64 E-value=0.059 Score=38.21 Aligned_cols=34 Identities=12% Similarity=0.291 Sum_probs=30.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
..++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus 12 ~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 12 KDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp TTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4579999996 999999999999999999999653
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=92.54 E-value=0.064 Score=42.26 Aligned_cols=31 Identities=23% Similarity=0.236 Sum_probs=28.7
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
|+|+|| |..|..++.+|+++|++|+++.+..
T Consensus 6 vvIIGa-Gi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVGA-GSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 899995 9999999999999999999999854
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=92.37 E-value=0.036 Score=40.74 Aligned_cols=34 Identities=21% Similarity=0.224 Sum_probs=27.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
|+.+|+|+| .|++|-.++..|.+.|.+|.++.++
T Consensus 2 m~a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~~ 35 (183)
T d1d7ya1 2 LKAPVVVLG-AGLASVSFVAELRQAGYQGLITVVG 35 (183)
T ss_dssp CCSSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEC-ccHHHHHHHHHHHhcCCceEEEEEe
Confidence 344799999 5999999999999988766555543
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=92.34 E-value=0.094 Score=35.35 Aligned_cols=36 Identities=25% Similarity=0.340 Sum_probs=28.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh---CCCeEEEEecCCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA---DNHQVRVLTRSRS 55 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~---~g~~V~~~~r~~~ 55 (325)
..++++|+|| |++|..++..|.+ .|.+|+++.|.+.
T Consensus 19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 3569999996 9999999966654 4568999988653
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=92.22 E-value=0.18 Score=36.25 Aligned_cols=68 Identities=15% Similarity=0.144 Sum_probs=38.3
Q ss_pred CeEEEECCCchHHHH-HHHHHHhCC-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRR-LVQRLQADN-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~-l~~~L~~~g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
|||.|+| .|.+|+. .+..|.+.+ .++.+.++++........... ... -..|.+.+.+ .++|+|+-+..
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~---~~~-~~~~~~~ll~--~~iD~V~I~tp 71 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR---VSA-TCTDYRDVLQ--YGVDAVMIHAA 71 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT---CCC-CCSSTTGGGG--GCCSEEEECSC
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc---ccc-ccccHHHhcc--cccceeccccc
Confidence 6999999 5888865 566666553 577766666554443322111 000 1123333322 37899987754
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=91.94 E-value=0.09 Score=38.33 Aligned_cols=35 Identities=20% Similarity=0.282 Sum_probs=29.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
.++|+|+| .|++|-.++..|.+.|.+|+++.+...
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~~ 37 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGDA 37 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecCc
Confidence 45899999 599999999999999988777665543
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.92 E-value=0.099 Score=36.35 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=29.0
Q ss_pred CCeEEEECCCchHHHHHHHHHHh----CCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQA----DNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~----~g~~V~~~~r~~~ 55 (325)
.++|+|+|| |++|..++..|.+ .|.+|+.+.+.+.
T Consensus 37 ~k~i~IvGg-G~~G~E~A~~l~~~~~~~g~~Vt~i~~~~~ 75 (137)
T d1m6ia2 37 VKSITIIGG-GFLGSELACALGRKARALGTEVIQLFPEKG 75 (137)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHHHHhcCCEEEEeccccc
Confidence 468999995 9999999988853 4889999988664
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=91.82 E-value=0.093 Score=40.66 Aligned_cols=34 Identities=26% Similarity=0.363 Sum_probs=29.9
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSRS 55 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~~ 55 (325)
++|+|+|| |.-|-..+..|.++|+ +|+++-+++.
T Consensus 1 P~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~~ 35 (347)
T d1b5qa1 1 PRVIVVGA-GMSGISAAKRLSEAGITDLLILEATDH 35 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSSS
T ss_pred CCEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCCC
Confidence 47999995 9999999999999995 7999988654
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.80 E-value=0.086 Score=40.37 Aligned_cols=33 Identities=27% Similarity=0.284 Sum_probs=30.0
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
|+|+| +|.-|...+..|+++|++|.++-+++.-
T Consensus 8 viViG-aG~~Gl~~A~~La~~G~~V~vlE~~~~~ 40 (297)
T d2bcgg1 8 VIVLG-TGITECILSGLLSVDGKKVLHIDKQDHY 40 (297)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCCCC
Confidence 89999 6999999999999999999999987643
|
| >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: 10-formyltetrahydrofolate dehydrogenase domain 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.79 E-value=0.13 Score=38.56 Aligned_cols=32 Identities=22% Similarity=0.430 Sum_probs=28.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
|||+++| ++..|..+++.|.+.|++|.++.-.
T Consensus 1 MkI~~~G-~~~~~~~~l~~L~~~~~~i~~V~t~ 32 (203)
T d2bw0a2 1 MKIAVIG-QSLFGQEVYCHLRKEGHEVVGVFTV 32 (203)
T ss_dssp CEEEEEC-CHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEEc-CCHHHHHHHHHHHHCCCcEEEEEcC
Confidence 7999998 6889999999999999999877643
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.78 E-value=0.22 Score=39.40 Aligned_cols=27 Identities=30% Similarity=0.288 Sum_probs=24.6
Q ss_pred CchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 29 TGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 29 tG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
||..|.+|+++|+.+|++|+.+.+..+
T Consensus 45 SGk~G~alA~~~~~~Ga~V~li~g~~s 71 (290)
T d1p9oa_ 45 SGRRGATSAEAFLAAGYGVLFLYRARS 71 (290)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEEETTS
T ss_pred chHHHHHHHHHHHHcCCEEEEEecCCc
Confidence 799999999999999999999988643
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=91.75 E-value=0.09 Score=39.99 Aligned_cols=70 Identities=11% Similarity=0.143 Sum_probs=41.3
Q ss_pred eEEEECCCchHHH-HHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECCC
Q 020476 22 TVSVTGATGFIGR-RLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLAG 95 (325)
Q Consensus 22 ~ilI~GatG~iG~-~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a~ 95 (325)
||.|+| +|.+|+ ++++.+... +.+|+++ +|++++......... .....+...++++++++ ++|+|+-+..
T Consensus 35 riaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~---i~~~~~~~~~d~~ell~~~~iD~V~I~tp 109 (221)
T d1h6da1 35 GYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG---VDPRKIYDYSNFDKIAKDPKIDAVYIILP 109 (221)
T ss_dssp EEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT---CCGGGEECSSSGGGGGGCTTCCEEEECSC
T ss_pred EEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc---cccccccccCchhhhcccccceeeeeccc
Confidence 899999 699996 566666554 5677755 555554433222111 11112223445666664 6899998764
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=91.04 E-value=0.18 Score=37.78 Aligned_cols=35 Identities=17% Similarity=0.208 Sum_probs=29.0
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
..|||+++| ++..+..+++.|.+.|++|.++.-.+
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit~~ 36 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFTQP 36 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEeCC
Confidence 468999998 68899999999999999987765443
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=90.80 E-value=0.09 Score=42.75 Aligned_cols=74 Identities=8% Similarity=0.196 Sum_probs=53.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-C-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAGT 96 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~~ 96 (325)
.+++.|+| +|..+...++.+... + .+|++++|++++......... ...++++.-.++++++++++|+|+-|.+.
T Consensus 128 a~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~--~~~g~~v~~~~s~~eav~~ADIi~t~Tas 203 (340)
T d1x7da_ 128 ARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLK--EYSGLTIRRASSVAEAVKGVDIITTVTAD 203 (340)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHT--TCTTCEEEECSSHHHHHTTCSEEEECCCC
T ss_pred CceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhh--hccCCCceecCCHHHHHhcCCceeecccc
Confidence 46899999 799999988877653 4 589999998876544332110 03345666677889999999999987753
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.68 E-value=0.5 Score=40.83 Aligned_cols=33 Identities=12% Similarity=0.210 Sum_probs=27.8
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRS 53 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~ 53 (325)
..+|+|+|+ |-+|..+++-|...|. .+++++.+
T Consensus 25 ~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d 58 (529)
T d1yova1 25 SAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGN 58 (529)
T ss_dssp HCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCS
T ss_pred CCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 359999996 7799999999999995 78888754
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=90.61 E-value=0.36 Score=35.59 Aligned_cols=93 Identities=16% Similarity=0.176 Sum_probs=56.5
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCC-----C-C--ccccCceeec--------CCchhH
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPG-----K-K--TRFFPGVMIA--------EEPQWR 81 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~-----~-~--~~~~~~~d~~--------d~~~~~ 81 (325)
|||.|+| -|.-|..++..|.+.+. +.+++.-+.......... . . .....+.|.. +.+.+.
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~~~a~~ki~iG~~~t~G~G~g~~p~~g~~aa~e~~~~I~ 79 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEASNADVKIQIGENITRGLGAGGRPEIGEQAALESEEKIR 79 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHTCCCSEEEECCTTTTTTSCCTTCHHHHHHHHHHTHHHHH
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhcCCcceEEecccccCCCcccccCchhhHhHHHHHHHHHH
Confidence 5899999 69999999999988763 445555433222111100 0 0 0000111111 566788
Q ss_pred hhhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 82 DCIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 82 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
+.++++|.||-+||.... +-..++--+.+.+++
T Consensus 80 ~~l~~~d~vfi~AGlGGg-------------TGtgaapviA~~ake 112 (194)
T d1w5fa1 80 EVLQDTHMVFITAGFGGG-------------TGTGASPVIAKIAKE 112 (194)
T ss_dssp HHTTTCSEEEEEEETTSS-------------HHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEEecCCC-------------cccchHHHHHHHHHH
Confidence 888999999999997643 223445567888888
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.54 E-value=0.05 Score=40.09 Aligned_cols=69 Identities=17% Similarity=0.282 Sum_probs=42.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhC-CCeEEEE-ecCCCcccccCCCCCccccC-ceeecCCchhHhhh--CCCCEEEECCC
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD-NHQVRVL-TRSRSKAELIFPGKKTRFFP-GVMIAEEPQWRDCI--QGSTAVVNLAG 95 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~-g~~V~~~-~r~~~~~~~~~~~~~~~~~~-~~d~~d~~~~~~~~--~~~d~vi~~a~ 95 (325)
+||.|+| +|.+|+..++.|... +.+|+++ ++++++......... .+ ...+ .+++++++ .++|+|+-+..
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~---~~~~~~~--~~~~~~ll~~~~iD~v~I~tp 75 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN---YPESTKI--HGSYESLLEDPEIDALYVPLP 75 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT---CCTTCEE--ESSHHHHHHCTTCCEEEECCC
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc---cccceee--cCcHHHhhhccccceeeeccc
Confidence 5899999 699999999999876 4688765 555444332221110 11 1222 23455555 37899997753
|
| >d1gtma1 c.2.1.7 (A:181-419) Glutamate dehydrogenase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=90.49 E-value=0.6 Score=35.60 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=28.2
Q ss_pred cCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEecC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTRS 53 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r~ 53 (325)
..++|+|-| .|.+|.++++.|.+ .|..|++++-+
T Consensus 31 ~g~~v~IqG-fGnVG~~~a~~L~~~~G~kvv~vsD~ 65 (239)
T d1gtma1 31 KGKTIAIQG-YGNAGYYLAKIMSEDFGMKVVAVSDS 65 (239)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEEECS
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHhcCcceeecccc
Confidence 457899999 69999999999976 48998888643
|
| >d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Phenylacetone monooxygenase species: Thermobifida fusca [TaxId: 2021]
Probab=90.36 E-value=0.16 Score=40.43 Aligned_cols=34 Identities=32% Similarity=0.425 Sum_probs=30.9
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
.|+|+|| |+.|-..+..|.+.|.+|+++.+.++-
T Consensus 9 dV~IIGA-G~sGl~~a~~L~~~G~~v~i~Ek~~~i 42 (298)
T d1w4xa1 9 DVLVVGA-GFSGLYALYRLRELGRSVHVIETAGDV 42 (298)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECc-cHHHHHHHHHHHhCCCCEEEEEcCCCc
Confidence 6999995 999999999999999999999987653
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=89.35 E-value=0.3 Score=35.54 Aligned_cols=68 Identities=16% Similarity=0.217 Sum_probs=39.4
Q ss_pred CCeEEEECCCchHHHH-HHHHHHhCC--CeEEEE-ecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEEC
Q 020476 20 QMTVSVTGATGFIGRR-LVQRLQADN--HQVRVL-TRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNL 93 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~-l~~~L~~~g--~~V~~~-~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~ 93 (325)
++||.|+| +|.+|+. .++.+.+.+ .+|+++ ++++++....... +....+ .++++++++ ++|+|+-+
T Consensus 3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~-----~~~~~~--~~~~~ell~~~~id~v~I~ 74 (181)
T d1zh8a1 3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKM-----VGNPAV--FDSYEELLESGLVDAVDLT 74 (181)
T ss_dssp CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHH-----HSSCEE--ESCHHHHHHSSCCSEEEEC
T ss_pred CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcc-----ccccce--eeeeeccccccccceeecc
Confidence 35899999 6999986 467776643 467765 4544443322211 111111 234566664 68999977
Q ss_pred CC
Q 020476 94 AG 95 (325)
Q Consensus 94 a~ 95 (325)
..
T Consensus 75 tp 76 (181)
T d1zh8a1 75 LP 76 (181)
T ss_dssp CC
T ss_pred cc
Confidence 53
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=89.23 E-value=0.7 Score=35.08 Aligned_cols=34 Identities=21% Similarity=0.272 Sum_probs=28.4
Q ss_pred hcCCeEEEECCCchHHHHHHHHHHh-CCCeEEEEec
Q 020476 18 ASQMTVSVTGATGFIGRRLVQRLQA-DNHQVRVLTR 52 (325)
Q Consensus 18 ~~~~~ilI~GatG~iG~~l~~~L~~-~g~~V~~~~r 52 (325)
...++|+|-| .|.+|+++++.|.+ .|..|++++-
T Consensus 29 l~g~~vaIqG-~GnVG~~~a~~L~~e~Ga~vv~vsd 63 (234)
T d1b26a1 29 PKKATVAVQG-FGNVGQFAALLISQELGSKVVAVSD 63 (234)
T ss_dssp TTTCEEEEEC-CSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHhcCCceEEeec
Confidence 3456899998 89999999999975 5999988874
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.07 E-value=0.26 Score=39.57 Aligned_cols=35 Identities=23% Similarity=0.290 Sum_probs=30.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
..||+|+| +|.-|-..+..|.++|++|+++-++..
T Consensus 5 ~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~r 39 (449)
T d2dw4a2 5 TGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARDR 39 (449)
T ss_dssp CCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 45899999 599999999999999999999976543
|
| >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Class I ketol-acid reductoisomerase (KARI) species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.02 E-value=0.19 Score=36.10 Aligned_cols=67 Identities=19% Similarity=0.183 Sum_probs=50.6
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++|.|+| -|-.|.+-+.-|.++|.+|++--|..++.....+ ..+. +.-.+.++.+.+|+|..+..
T Consensus 15 k~k~IaViG-YGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A~------~~Gf---~v~~~~eA~~~aDiim~L~P 81 (182)
T d1np3a2 15 QGKKVAIIG-YGSQGHAHACNLKDSGVDVTVGLRSGSATVAKAE------AHGL---KVADVKTAVAAADVVMILTP 81 (182)
T ss_dssp HTSCEEEEC-CSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHHH------HTTC---EEECHHHHHHTCSEEEECSC
T ss_pred CCCEEEEEe-eCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHHh------hhcc---ccccHHHHhhhcCeeeeecc
Confidence 357999999 8999999999999999999988887654322111 1122 34567788899999999974
|
| >d1lc0a1 c.2.1.3 (A:2-128,A:247-291) Biliverdin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Biliverdin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.40 E-value=0.64 Score=33.29 Aligned_cols=93 Identities=10% Similarity=0.102 Sum_probs=50.7
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCC--CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCEEEECC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADN--HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTAVVNLA 94 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g--~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~vi~~a 94 (325)
.+++|.|+| +|++|+..++.|.+.+ ..+.+.+......... ....... ++++++. ++|+|+-+.
T Consensus 6 ~k~kv~iIG-~G~~g~~h~~~l~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~---~~~e~l~~~~iD~V~I~t 73 (172)
T d1lc0a1 6 GKFGVVVVG-VGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELGS--------LDEVRQI---SLEDALRSQEIDVAYICS 73 (172)
T ss_dssp CSEEEEEEC-CSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCCE--------ETTEEBC---CHHHHHHCSSEEEEEECS
T ss_pred CCcEEEEEc-CCHHHHHHHHHHHhCCCCcEEEEEeccchHHHHH--------hhccCcC---CHHHHHhCCCcchhhhcc
Confidence 356999999 5999999988876542 2233333322211100 1112222 3555554 689998776
Q ss_pred CCCCCCCCChhhHHHHH------------HHhhHHHHHHHHHHhc
Q 020476 95 GTPIGTRWSSEIKKEIK------------ESRIRVTSKVVDLINE 127 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~------------~~nv~~~~~ll~~~~~ 127 (325)
.. ....+...... ..|+.-...+++++++
T Consensus 74 p~----~~H~~~~~~al~~gk~V~~EKP~a~~~~e~~~l~~~a~~ 114 (172)
T d1lc0a1 74 ES----SSHEDYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQ 114 (172)
T ss_dssp CG----GGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHH
T ss_pred cc----cccccccccccccchhhhcCCCccccHHHHHHHHHHHHH
Confidence 42 11122122222 2566777888888887
|
| >d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Adrenodoxin reductase of mitochondrial p450 systems species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.18 E-value=0.33 Score=36.66 Aligned_cols=35 Identities=20% Similarity=0.252 Sum_probs=30.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhC--CCeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQAD--NHQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~--g~~V~~~~r~~~~ 56 (325)
+||+|+| +|--|...+++|.+. |++|+++.+.+..
T Consensus 2 ~kv~iIG-aGpaGl~aA~~L~~~~~~~~V~v~e~~~~~ 38 (230)
T d1cjca2 2 PQICVVG-SGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 38 (230)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CeEEEEC-ccHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 5999999 599999999999765 7899999887643
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=87.15 E-value=0.39 Score=34.33 Aligned_cols=31 Identities=23% Similarity=0.419 Sum_probs=26.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-CeEEEEec
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-HQVRVLTR 52 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-~~V~~~~r 52 (325)
|||.|-| -|-||+.+.|.++++. .+|.++.-
T Consensus 2 ikigING-FGRIGR~v~R~~~~~~~i~ivaINd 33 (166)
T d1gado1 2 IKVGING-FGRIGRIVFRAAQKRSDIEIVAIND 33 (166)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred eEEEEEC-CcHHHHHHHHHHhhCCCeEEEEEeC
Confidence 5899998 8999999999999885 57777664
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=87.05 E-value=0.24 Score=41.18 Aligned_cols=32 Identities=28% Similarity=0.361 Sum_probs=25.4
Q ss_pred CeEEEECC------CchHH---HHHHHHHHhCCCeEEEEec
Q 020476 21 MTVSVTGA------TGFIG---RRLVQRLQADNHQVRVLTR 52 (325)
Q Consensus 21 ~~ilI~Ga------tG~iG---~~l~~~L~~~g~~V~~~~r 52 (325)
||||+++. +|.+| ..|+++|.+.||+|++++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 79999774 35555 5678899999999999974
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.92 E-value=0.49 Score=33.36 Aligned_cols=35 Identities=20% Similarity=0.062 Sum_probs=29.3
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCC-eEEEEecCC
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNH-QVRVLTRSR 54 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~-~V~~~~r~~ 54 (325)
..+||+|+|| |+.|.-.+..+++.|. .|+.+.|+.
T Consensus 44 ~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 44 IRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 3468999995 9999999999999985 688888765
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=86.81 E-value=0.38 Score=36.71 Aligned_cols=34 Identities=21% Similarity=0.210 Sum_probs=30.2
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
-|+|+|| |..|...+..|.+.|++|.++.+.+..
T Consensus 4 DViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~~ 37 (251)
T d2i0za1 4 DVIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNKL 37 (251)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 4899995 999999999999999999999987643
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=86.79 E-value=0.33 Score=39.60 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=28.4
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
-|+|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus 4 ~VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 4 PAVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred eEEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 378999 7999999999999999999999874
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.65 E-value=0.38 Score=38.63 Aligned_cols=32 Identities=28% Similarity=0.331 Sum_probs=29.1
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
|+|+| +|.-|-..+..|.++|++|+++-++..
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~~ 33 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARDR 33 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 78999 599999999999999999999987664
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=86.59 E-value=0.45 Score=36.73 Aligned_cols=33 Identities=18% Similarity=0.219 Sum_probs=29.5
Q ss_pred cCCeEEEECCCchHHHHHHHHHHhCCCeEEEEec
Q 020476 19 SQMTVSVTGATGFIGRRLVQRLQADNHQVRVLTR 52 (325)
Q Consensus 19 ~~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 52 (325)
..+||+|-| .|.+|+++++.|.+.|.+|++++-
T Consensus 35 ~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 35 VGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp TTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 456999999 799999999999999999998864
|
| >d2nu7a1 c.2.1.8 (A:2-120) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Escherichia coli [TaxId: 562]
Probab=86.46 E-value=3.1 Score=27.44 Aligned_cols=36 Identities=17% Similarity=0.016 Sum_probs=31.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
.||+|-|-||..|+.-+++.++-|-+|++-+.....
T Consensus 7 trVlvQGiTG~~G~~ht~~m~~yGT~vVaGVtPgkg 42 (119)
T d2nu7a1 7 TKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKG 42 (119)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCT
T ss_pred CcEEEEcCCCcHHHHHHHHHHHhCCceEEEEccCCC
Confidence 489999999999999999999999998877765543
|
| >d1ofua1 c.32.1.1 (A:11-208) Cell-division protein FtsZ {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.18 E-value=2.8 Score=30.59 Aligned_cols=92 Identities=15% Similarity=0.181 Sum_probs=56.5
Q ss_pred eEEEECCCchHHHHHHHHHHhCCC---eEEEEecCCCcccccCCCCCc--------cccCceeec--------CCchhHh
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNH---QVRVLTRSRSKAELIFPGKKT--------RFFPGVMIA--------EEPQWRD 82 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~---~V~~~~r~~~~~~~~~~~~~~--------~~~~~~d~~--------d~~~~~~ 82 (325)
+|.|+| -|.-|..++..+.+.+. +.+++.-+............. ..-.+.|.. +.+.+.+
T Consensus 3 ~IkViG-vGGaG~n~v~~~~~~~~~~v~~iainTD~~~L~~~~~~~ki~iG~~~~~g~G~gg~p~~g~~aa~e~~~~I~~ 81 (198)
T d1ofua1 3 VIKVIG-VGGGGGNAVNHMAKNNVEGVEFICANTDAQALKNIAARTVLQLGPGVTKGLGAGANPEVGRQAALEDRERISE 81 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESBTGGGSSCSCSEEEECCHHHHTTBCCCSCHHHHHHHHHHTHHHHHH
T ss_pred eEEEEE-ECchHHHHHHHHHHcCCCCeEEEEEeCcHHHHhcCCccceeccccccccCCCCCCChHHHHHHHHHHHHHHHH
Confidence 578888 68999999999998864 566665544333221110000 000111111 5567888
Q ss_pred hhCCCCEEEECCCCCCCCCCChhhHHHHHHHhhHHHHHHHHHHhc
Q 020476 83 CIQGSTAVVNLAGTPIGTRWSSEIKKEIKESRIRVTSKVVDLINE 127 (325)
Q Consensus 83 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~nv~~~~~ll~~~~~ 127 (325)
.++++|.||-+||....+ -..++--+.+.+++
T Consensus 82 ~l~~~d~vfi~AGlGGGT-------------GtgaapviA~~ake 113 (198)
T d1ofua1 82 VLEGADMVFITTGMGGGT-------------GTGAAPIIAEVAKE 113 (198)
T ss_dssp HHTTCSEEEEEEETTSSH-------------HHHHHHHHHHHHHH
T ss_pred HhCCCCeEEEEecCCCCc-------------cccHHHHHHHHHHH
Confidence 889999999999976432 23344457888888
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=86.03 E-value=3.2 Score=27.77 Aligned_cols=38 Identities=18% Similarity=0.029 Sum_probs=32.2
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
..||+|-|-||..|+.-+++.++-|-+|++-+......
T Consensus 15 ~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG 52 (130)
T d1euca1 15 NTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGG 52 (130)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT
T ss_pred CCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCC
Confidence 34899999999999999999999999988877655433
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=85.88 E-value=0.14 Score=41.31 Aligned_cols=70 Identities=11% Similarity=0.052 Sum_probs=45.9
Q ss_pred CCeEEEECCCchHHHHHHHHHHhC-C-CeEEEEecCCCcccccCCCCCccccCceeecCCchhHhhhCCCCEEEECCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQAD-N-HQVRVLTRSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQGSTAVVNLAG 95 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~-g-~~V~~~~r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~~~d~vi~~a~ 95 (325)
..++.|+| +|..+++.++.|... + .+|.+++|++++......... ....+.. ....+++.++|+|+-+..
T Consensus 125 ~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~---~~~~~~~--~~~~~a~~~aDiV~taT~ 196 (320)
T d1omoa_ 125 SSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCE---DRGISAS--VQPAEEASRCDVLVTTTP 196 (320)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHH---HTTCCEE--ECCHHHHTSSSEEEECCC
T ss_pred ccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHH---hcCCccc--cchhhhhccccEEEEecc
Confidence 35899998 799999999988763 3 489999998766544332111 0011111 123456789999998765
|
| >d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Phenol hydroxylase species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]
Probab=84.63 E-value=0.52 Score=37.89 Aligned_cols=34 Identities=26% Similarity=0.417 Sum_probs=29.0
Q ss_pred eEEEECCCchHHHHHHHHHH-----hCCCeEEEEecCCCc
Q 020476 22 TVSVTGATGFIGRRLVQRLQ-----ADNHQVRVLTRSRSK 56 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~ 56 (325)
-|+|+|| |-.|..++..|+ +.|++|+++.|.+..
T Consensus 9 DV~IvGa-G~aGl~lA~~La~~~~~~~G~~v~vlEr~~~~ 47 (360)
T d1pn0a1 9 DVLIVGA-GPAGLMAARVLSEYVRQKPDLKVRIIDKRSTK 47 (360)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHHHHSTTCCEEEECSSSSC
T ss_pred CEEEECc-CHHHHHHHHHHHhcccccCCCcEEEEcCCCCC
Confidence 3899995 999999999996 469999999987644
|
| >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Galactose/lactose metabolism regulatory protein GAL80 species: Yeast (Kluyveromyces lactis) [TaxId: 28985]
Probab=84.05 E-value=0.31 Score=37.28 Aligned_cols=73 Identities=11% Similarity=0.079 Sum_probs=40.4
Q ss_pred hcCCeEEEECCC---chHHHHHHHHHHhC--CCeEEEEe-cCCCcccccCCCCCccccCceeecCCchhHhhhC--CCCE
Q 020476 18 ASQMTVSVTGAT---GFIGRRLVQRLQAD--NHQVRVLT-RSRSKAELIFPGKKTRFFPGVMIAEEPQWRDCIQ--GSTA 89 (325)
Q Consensus 18 ~~~~~ilI~Gat---G~iG~~l~~~L~~~--g~~V~~~~-r~~~~~~~~~~~~~~~~~~~~d~~d~~~~~~~~~--~~d~ 89 (325)
..++||.|+|.. |+++..-+..+.+. +.+|+++. +++++......... ..... ..++++++++ ++|+
T Consensus 14 ~k~irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~---~~~~~--~~~~~~~l~~~~~iD~ 88 (237)
T d2nvwa1 14 SRPIRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQ---LKHAT--GFDSLESFAQYKDIDM 88 (237)
T ss_dssp GCCEEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTT---CTTCE--EESCHHHHHHCTTCSE
T ss_pred CCCeEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcc---cccce--eecchhhcccccccce
Confidence 345699999964 46777666667653 46888664 44433322211110 11111 1235555553 6899
Q ss_pred EEECCC
Q 020476 90 VVNLAG 95 (325)
Q Consensus 90 vi~~a~ 95 (325)
|+-+..
T Consensus 89 V~i~tp 94 (237)
T d2nvwa1 89 IVVSVK 94 (237)
T ss_dssp EEECSC
T ss_pred eeccCC
Confidence 998864
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=83.89 E-value=0.58 Score=37.43 Aligned_cols=33 Identities=30% Similarity=0.406 Sum_probs=23.8
Q ss_pred CeEEEECC-C-chH--HHHHHHHHHhCCCeEEEEecC
Q 020476 21 MTVSVTGA-T-GFI--GRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 21 ~~ilI~Ga-t-G~i--G~~l~~~L~~~g~~V~~~~r~ 53 (325)
+||+|++| | |.+ ..+|+++|.++||+|..++..
T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~G~eV~~i~~~ 37 (351)
T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQGWQVRWLGTA 37 (351)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CEEEEEcCCcHHHHHHHHHHHHHHHhCCCEEEEEEeC
Confidence 57888774 3 343 345889999999999887643
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=83.52 E-value=4.4 Score=26.74 Aligned_cols=37 Identities=16% Similarity=0.137 Sum_probs=31.8
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCcc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSKA 57 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~~ 57 (325)
.||+|-|-||..|+.-+++.++-|-+|++-+......
T Consensus 8 trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG 44 (121)
T d1oi7a1 8 TRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGG 44 (121)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTT
T ss_pred CcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCC
Confidence 4899999999999999999999999988887755443
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=83.32 E-value=0.63 Score=33.31 Aligned_cols=30 Identities=23% Similarity=0.364 Sum_probs=26.6
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEec
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTR 52 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 52 (325)
||.|-| -|-||+.+.|.+++++.+|.++.-
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd 31 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVND 31 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECC
Confidence 788988 899999999999999888888764
|
| >d3coxa1 c.3.1.2 (A:5-318,A:451-506) Cholesterol oxidase of GMC family {Brevibacterium sterolicum [TaxId: 1702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Brevibacterium sterolicum [TaxId: 1702]
Probab=83.17 E-value=0.55 Score=38.23 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=28.1
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
-++|+| +|+-|..++.+|.+.|++|.++-+-
T Consensus 9 dvIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 39 (370)
T d3coxa1 9 PALVIG-SGYGGAVAALRLTQAGIPTQIVEMG 39 (370)
T ss_dssp EEEEEC-CSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCC
Confidence 388999 6999999999999999999999874
|
| >d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Thi4-like domain: Thiazole biosynthetic enzyme Thi4 species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]
Probab=82.61 E-value=0.98 Score=35.07 Aligned_cols=34 Identities=32% Similarity=0.401 Sum_probs=29.9
Q ss_pred eEEEECCCchHHHHHHHHHHhC-CCeEEEEecCCCc
Q 020476 22 TVSVTGATGFIGRRLVQRLQAD-NHQVRVLTRSRSK 56 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~-g~~V~~~~r~~~~ 56 (325)
-|+|+|| |.-|-..+..|+++ |++|.++.+.+.-
T Consensus 35 DViVIGa-GpaGL~aA~~LA~~~G~~V~vlE~~~~~ 69 (278)
T d1rp0a1 35 DVVVVGA-GSAGLSAAYEISKNPNVQVAIIEQSVSP 69 (278)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSTTSCEEEEESSSSC
T ss_pred CEEEECC-CHHHHHHHHHHHHccCCeEEEEecCCCC
Confidence 4999996 99999999999874 9999999987654
|
| >d2f5va1 c.3.1.2 (A:43-354,A:553-619) Pyranose 2-oxidase {White-rot fungus (Peniophora sp. SG) [TaxId: 204723]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Pyranose 2-oxidase species: White-rot fungus (Peniophora sp. SG) [TaxId: 204723]
Probab=82.34 E-value=0.66 Score=37.57 Aligned_cols=30 Identities=23% Similarity=0.372 Sum_probs=27.8
Q ss_pred EEEECCCchHHHHHHHHHHhCCCeEEEEecC
Q 020476 23 VSVTGATGFIGRRLVQRLQADNHQVRVLTRS 53 (325)
Q Consensus 23 ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~ 53 (325)
++|+| +|.-|..++..|.+.|++|.++-+-
T Consensus 7 viIVG-sG~aG~v~A~~La~~G~kVlvLEaG 36 (379)
T d2f5va1 7 VVIVG-SGPIGCTYARELVGAGYKVAMFDIG 36 (379)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEC-cCHHHHHHHHHHhhCCCeEEEEecC
Confidence 89999 6999999999999999999999764
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=82.06 E-value=0.83 Score=34.92 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=30.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCCc
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRSK 56 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 56 (325)
.|+|+|| |-.|...+-.|.++|.+|.++.+.+..
T Consensus 6 DViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~~ 39 (253)
T d2gqfa1 6 ENIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKKI 39 (253)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSSSS
T ss_pred cEEEECc-CHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 5999995 999999999999999999999987654
|
| >d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain domain: Flavocytochrome c3 (respiratory fumarate reductase) species: Shewanella frigidimarina [TaxId: 56812]
Probab=81.74 E-value=0.77 Score=36.20 Aligned_cols=33 Identities=18% Similarity=0.215 Sum_probs=29.7
Q ss_pred eEEEECCCchHHHHHHHHHHhCCCeEEEEecCCC
Q 020476 22 TVSVTGATGFIGRRLVQRLQADNHQVRVLTRSRS 55 (325)
Q Consensus 22 ~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (325)
-|+|+| +|..|...+..|+++|.+|.++.+.+.
T Consensus 18 DVlVIG-~G~aGl~aA~~la~~G~~V~lvEK~~~ 50 (308)
T d1y0pa2 18 DVVVVG-SGGAGFSAAISATDSGAKVILIEKEPV 50 (308)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 399999 599999999999999999999988653
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=81.66 E-value=1.1 Score=32.11 Aligned_cols=30 Identities=20% Similarity=0.451 Sum_probs=24.0
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC----CeEEEEe
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN----HQVRVLT 51 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g----~~V~~~~ 51 (325)
|||.|=| -|-||+.+.|.+++++ .+|+++.
T Consensus 2 ikigING-fGRIGR~v~R~~~~~~~~~~~~vvaIN 35 (173)
T d1obfo1 2 IRVAING-YGRIGRNILRAHYEGGKSHDIEIVAIN 35 (173)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHTTSCSSEEEEEEE
T ss_pred eEEEEEC-CcHHHHHHHHHHHhCCCCCCeEEEEEc
Confidence 6899999 8999999999998753 3565554
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=81.46 E-value=0.77 Score=32.83 Aligned_cols=31 Identities=29% Similarity=0.550 Sum_probs=27.7
Q ss_pred CeEEEECCCchHHHHHHHHHHhCCCeEEEEec
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADNHQVRVLTR 52 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r 52 (325)
|||.|=| -|-||+.+.|.|.+++.+|.++.-
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd 31 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALIND 31 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEC
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECC
Confidence 6899998 799999999999999999888764
|
| >d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=81.14 E-value=0.53 Score=34.40 Aligned_cols=34 Identities=6% Similarity=0.028 Sum_probs=29.6
Q ss_pred CCeEEEECCCchHHHHHHHHHHhCCCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIGRRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG~~l~~~L~~~g~~V~~~~r~~ 54 (325)
..+|+|+|| |..|..-+-.|.+.|.+|.++.+..
T Consensus 5 ~~~VvIIGg-GpaGl~aA~~~ar~g~~v~vie~~~ 38 (192)
T d1vdca1 5 NTRLCIVGS-GPAAHTAAIYAARAELKPLLFEGWM 38 (192)
T ss_dssp EEEEEEECC-SHHHHHHHHHHHHTTCCCEEECCSS
T ss_pred cceEEEECC-CHHHHHHHHHHHHcCCcEEEEEeec
Confidence 458999995 9999999999999999999997644
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=80.95 E-value=0.91 Score=38.36 Aligned_cols=31 Identities=29% Similarity=0.307 Sum_probs=24.4
Q ss_pred CeEEEECC-------CchHH---HHHHHHHHhCCCeEEEEe
Q 020476 21 MTVSVTGA-------TGFIG---RRLVQRLQADNHQVRVLT 51 (325)
Q Consensus 21 ~~ilI~Ga-------tG~iG---~~l~~~L~~~g~~V~~~~ 51 (325)
|||+.++. +|.+| .+|+++|.++||+|++++
T Consensus 1 M~i~~v~~e~~P~~~~GGl~~vv~~La~~L~~~Gh~V~Vi~ 41 (477)
T d1rzua_ 1 MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLI 41 (477)
T ss_dssp CEEEEECSCBTTTBCSSHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEEEEeeecccccCcHHHHHHHHHHHHHHcCCeEEEEe
Confidence 68888764 36665 567899999999999986
|
| >d2ax3a2 c.104.1.1 (A:1-211) Hypothetical protein TM0922, N-terminal domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: YjeF N-terminal domain-like superfamily: YjeF N-terminal domain-like family: YjeF N-terminal domain-like domain: Hypothetical protein TM0922, N-terminal domain species: Thermotoga maritima [TaxId: 2336]
Probab=80.44 E-value=2.3 Score=31.53 Aligned_cols=35 Identities=17% Similarity=0.080 Sum_probs=27.3
Q ss_pred CCeEEEECCCchHH---HHHHHHHHhCCCeEEEEecCC
Q 020476 20 QMTVSVTGATGFIG---RRLVQRLQADNHQVRVLTRSR 54 (325)
Q Consensus 20 ~~~ilI~GatG~iG---~~l~~~L~~~g~~V~~~~r~~ 54 (325)
..+|+|+-|.|.=| -.+++.|.+.|++|.++....
T Consensus 40 ~~~vlvl~G~GNNGGDGl~~Ar~L~~~g~~V~v~~~~~ 77 (211)
T d2ax3a2 40 DYRFLVLCGGGNNGGDGFVVARNLLGVVKDVLVVFLGK 77 (211)
T ss_dssp TCEEEEEECSSHHHHHHHHHHHHHTTTSSEEEEEECCS
T ss_pred CCcEEEEECCCCCchhHHHHHHHHHhcCCeeEEEecCc
Confidence 45888888888654 578899999999998887543
|
| >d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Ferredoxin:NADP reductase FprA species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.08 E-value=0.59 Score=35.18 Aligned_cols=35 Identities=14% Similarity=0.113 Sum_probs=30.3
Q ss_pred CeEEEECCCchHHHHHHHHHHhCC-------CeEEEEecCCCc
Q 020476 21 MTVSVTGATGFIGRRLVQRLQADN-------HQVRVLTRSRSK 56 (325)
Q Consensus 21 ~~ilI~GatG~iG~~l~~~L~~~g-------~~V~~~~r~~~~ 56 (325)
.||+|+| +|--|-+.+.+|+++| ++|+++.+.+..
T Consensus 3 ~~VaVIG-aGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~~ 44 (239)
T d1lqta2 3 YYIAIVG-SGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 44 (239)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred cEEEEEC-cCHHHHHHHHHHHHcCCccccCCCceEEEecCCCC
Confidence 4899999 6999999999999987 479999987654
|