Your job contains 1 sequence.
>020480
MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD
YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ
QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE
GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE
YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHS
RYLLYKFPFFVLVFPLFPSLQHYLN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020480
(325 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2161253 - symbol:MSI1 "MULTICOPY SUPRESSOR OF ... 1336 2.0e-136 1
UNIPROTKB|F2Z4M0 - symbol:RBBP4 "Histone-binding protein ... 943 8.7e-95 1
UNIPROTKB|Q9W7I5 - symbol:RBBP4 "Histone-binding protein ... 943 8.7e-95 1
UNIPROTKB|Q3MHL3 - symbol:RBBP4 "Histone-binding protein ... 943 8.7e-95 1
UNIPROTKB|E2QXR8 - symbol:RBBP4 "Uncharacterized protein"... 943 8.7e-95 1
UNIPROTKB|Q09028 - symbol:RBBP4 "Histone-binding protein ... 943 8.7e-95 1
UNIPROTKB|Q6P315 - symbol:rbbp7 "Histone-binding protein ... 943 8.7e-95 1
MGI|MGI:1194912 - symbol:Rbbp4 "retinoblastoma binding pr... 943 8.7e-95 1
RGD|1593768 - symbol:Rbbp4 "retinoblastoma binding protei... 943 8.7e-95 1
UNIPROTKB|Q8AVH1 - symbol:rbbp7 "Histone-binding protein ... 942 1.1e-94 1
UNIPROTKB|Q5RF92 - symbol:RBBP4 "Histone-binding protein ... 938 3.0e-94 1
UNIPROTKB|Q5M7K4 - symbol:rbbp4 "Histone-binding protein ... 936 4.8e-94 1
UNIPROTKB|Q6INH0 - symbol:rbbp4-b "Histone-binding protei... 935 6.1e-94 1
ZFIN|ZDB-GENE-030131-445 - symbol:rbb4 "retinoblastoma bi... 923 1.1e-92 1
FB|FBgn0263979 - symbol:Caf1 "Chromatin assembly factor 1... 921 1.9e-92 1
ZFIN|ZDB-GENE-030131-848 - symbol:rbb4l "retinoblastoma b... 921 1.9e-92 1
UNIPROTKB|Q9I8G9 - symbol:RBBP7 "Histone-binding protein ... 920 2.4e-92 1
UNIPROTKB|Q16576 - symbol:RBBP7 "Histone-binding protein ... 918 3.9e-92 1
UNIPROTKB|O93377 - symbol:rbbp4-a "Histone-binding protei... 918 3.9e-92 1
UNIPROTKB|Q4R304 - symbol:RBBP7 "Histone-binding protein ... 918 3.9e-92 1
MGI|MGI:1194910 - symbol:Rbbp7 "retinoblastoma binding pr... 918 3.9e-92 1
RGD|620125 - symbol:Rbbp7 "retinoblastoma binding protein... 918 3.9e-92 1
UNIPROTKB|Q3SWX8 - symbol:RBBP7 "Histone-binding protein ... 914 1.0e-91 1
UNIPROTKB|E2RM49 - symbol:RBBP7 "Uncharacterized protein"... 914 1.0e-91 1
UNIPROTKB|E2RM67 - symbol:RBBP7 "Uncharacterized protein"... 914 1.0e-91 1
UNIPROTKB|F1SQR0 - symbol:LOC100519001 "Uncharacterized p... 914 1.0e-91 1
UNIPROTKB|I3LV46 - symbol:LOC100519001 "Uncharacterized p... 914 1.0e-91 1
UNIPROTKB|Q5R654 - symbol:RBBP7 "Histone-binding protein ... 910 2.7e-91 1
RGD|1563620 - symbol:RGD1563620 "similar to retinoblastom... 890 3.6e-89 1
DICTYBASE|DDB_G0282529 - symbol:rbbD "putative Retinoblas... 883 2.0e-88 1
UNIPROTKB|E9PC52 - symbol:RBBP7 "Histone-binding protein ... 862 3.3e-86 1
UNIPROTKB|K7GRD3 - symbol:LOC100519001 "Uncharacterized p... 858 8.9e-86 1
UNIPROTKB|I3LKT8 - symbol:RBBP4 "Uncharacterized protein"... 831 6.4e-83 1
UNIPROTKB|Q61Y48 - symbol:lin-53 "Probable histone-bindin... 826 2.2e-82 1
WB|WBGene00003036 - symbol:lin-53 species:6239 "Caenorhab... 798 2.0e-79 1
UNIPROTKB|P90916 - symbol:lin-53 "Probable histone-bindin... 798 2.0e-79 1
UNIPROTKB|K7GKX8 - symbol:LOC100519001 "Uncharacterized p... 732 2.0e-72 1
TAIR|locus:2131551 - symbol:MSI3 "MULTICOPY SUPPRESSOR OF... 675 2.2e-66 1
TAIR|locus:2059856 - symbol:MSI2 "AT2G16780" species:3702... 666 2.0e-65 1
WB|WBGene00004312 - symbol:rba-1 species:6239 "Caenorhabd... 659 1.1e-64 1
POMBASE|SPCC1672.10 - symbol:mis16 "kinetochore protein M... 581 2.0e-56 1
ASPGD|ASPL0000017699 - symbol:AN8187 species:162425 "Emer... 429 5.4e-51 2
POMBASE|SPAC25H1.06 - symbol:pcf3 "CAF assembly factor (C... 452 9.3e-43 1
POMBASE|SPAC29A4.18 - symbol:prw1 "Clr6 histone deacetyla... 401 2.4e-37 1
GENEDB_PFALCIPARUM|PF13_0149 - symbol:PF13_0149 "chromati... 327 3.2e-36 3
UNIPROTKB|Q8IE52 - symbol:PF13_0149 "Chromatin assembly f... 327 3.2e-36 3
SGD|S000000782 - symbol:HAT2 "Subunit of the Hat1p-Hat2p ... 389 4.4e-36 1
GENEDB_PFALCIPARUM|PFA0520c - symbol:PFA0520c "chromatin ... 319 1.2e-28 1
UNIPROTKB|Q8I238 - symbol:PFA_0520c "Chromatin assembly f... 319 1.2e-28 1
GENEDB_PFALCIPARUM|PF14_0314 - symbol:PF14_0314 "chromati... 318 1.5e-28 1
UNIPROTKB|Q8ILD0 - symbol:PF14_0314 "Chromatin assembly f... 318 1.5e-28 1
TAIR|locus:2050372 - symbol:FVE species:3702 "Arabidopsis... 249 2.7e-28 2
CGD|CAL0005349 - symbol:HAT2 species:5476 "Candida albica... 191 4.3e-27 2
UNIPROTKB|Q59RH5 - symbol:HAT2 "Histone acetyltransferase... 191 4.3e-27 2
UNIPROTKB|C9JPP3 - symbol:RBBP4 "Histone-binding protein ... 292 8.4e-26 1
DICTYBASE|DDB_G0291566 - symbol:grwd1 "glutamate-rich WD ... 256 2.2e-21 1
CGD|CAL0005992 - symbol:orf19.3581 species:5476 "Candida ... 219 1.2e-20 2
UNIPROTKB|E9PND5 - symbol:RBBP4 "Histone-binding protein ... 235 9.2e-20 1
UNIPROTKB|C9J7L0 - symbol:RBBP7 "Histone-binding protein ... 215 1.2e-17 1
SGD|S000000399 - symbol:MSI1 "Subunit of chromatin assemb... 197 3.5e-17 2
TAIR|locus:2050388 - symbol:AT2G19540 "AT2G19540" species... 216 5.0e-16 1
CGD|CAL0001341 - symbol:orf19.6355 species:5476 "Candida ... 207 1.3e-14 1
UNIPROTKB|Q59PD8 - symbol:RRB1 "Likely nucleolar ribosome... 207 1.3e-14 1
CGD|CAL0003130 - symbol:orf19.7185 species:5476 "Candida ... 165 2.2e-13 3
UNIPROTKB|Q5A0B0 - symbol:CaO19.7185 "Putative uncharacte... 165 2.2e-13 3
SGD|S000004738 - symbol:RRB1 "Nuclear protein involved in... 196 3.4e-13 1
ASPGD|ASPL0000069856 - symbol:AN7205 species:162425 "Emer... 177 6.2e-11 1
TAIR|locus:2134408 - symbol:NFC5 "AT4G29730" species:3702... 173 1.8e-10 1
WB|WBGene00021899 - symbol:Y54H5A.1 species:6239 "Caenorh... 168 2.6e-10 2
POMBASE|SPBC1711.07 - symbol:SPBC1711.07 "WD repeat prote... 164 1.9e-09 1
FB|FBgn0022288 - symbol:l(2)09851 "lethal (2) 09851" spec... 157 1.1e-08 1
ZFIN|ZDB-GENE-030131-9844 - symbol:grwd1 "glutamate-rich ... 150 6.9e-08 1
UNIPROTKB|E2RBY0 - symbol:GRWD1 "Uncharacterized protein"... 147 1.4e-07 1
MGI|MGI:2141989 - symbol:Grwd1 "glutamate-rich WD repeat ... 147 1.5e-07 1
RGD|1310649 - symbol:Grwd1 "glutamate-rich WD repeat cont... 145 2.5e-07 1
UNIPROTKB|Q9BQ67 - symbol:GRWD1 "Glutamate-rich WD repeat... 144 3.3e-07 1
UNIPROTKB|E1BYP4 - symbol:PEX7 "Uncharacterized protein" ... 141 3.6e-07 1
UNIPROTKB|F1RL85 - symbol:GRWD1 "Uncharacterized protein"... 143 4.3e-07 1
UNIPROTKB|Q1JQD2 - symbol:GRWD1 "Glutamate-rich WD repeat... 141 7.1e-07 1
UNIPROTKB|F1S687 - symbol:PEX7 "Uncharacterized protein" ... 132 3.8e-06 1
ASPGD|ASPL0000074357 - symbol:AN4518 species:162425 "Emer... 138 6.7e-06 1
DICTYBASE|DDB_G0270992 - symbol:sec31 "putative transport... 138 7.1e-06 1
UNIPROTKB|Q08DL6 - symbol:PEX7 "Peroxisomal biogenesis fa... 125 2.6e-05 1
FB|FBgn0033526 - symbol:Caf1-105 "Caf1-105" species:7227 ... 130 2.7e-05 1
UNIPROTKB|E2R747 - symbol:CORO2A "Coronin" species:9615 "... 130 3.2e-05 2
UNIPROTKB|F1SSG3 - symbol:CORO2A "Coronin" species:9823 "... 127 3.5e-05 1
RGD|1308483 - symbol:Pex7 "peroxisomal biogenesis factor ... 122 5.4e-05 1
UNIPROTKB|E2QYX6 - symbol:PEX7 "Uncharacterized protein" ... 122 5.6e-05 1
UNIPROTKB|B4E039 - symbol:DCAF7 "DDB1- and CUL4-associate... 103 8.8e-05 1
UNIPROTKB|B4DRT0 - symbol:RBBP4 "Histone-binding protein ... 112 9.5e-05 1
UNIPROTKB|O00628 - symbol:PEX7 "Peroxisomal targeting sig... 120 9.5e-05 1
DICTYBASE|DDB_G0279801 - symbol:pex7 "peroxisomal biogene... 119 0.00012 1
UNIPROTKB|Q8R537 - symbol:PEX7 "Peroxisomal targeting sig... 119 0.00012 1
MGI|MGI:1321392 - symbol:Pex7 "peroxisomal biogenesis fac... 119 0.00012 1
UNIPROTKB|H0YCT5 - symbol:RBBP4 "Histone-binding protein ... 112 0.00013 1
UNIPROTKB|Q32LP9 - symbol:CORO2A "Coronin-2A" species:991... 122 0.00013 1
SGD|S000002304 - symbol:COP1 "Alpha subunit of COPI vesic... 126 0.00013 1
RGD|708560 - symbol:Coro6 "coronin 6" species:10116 "Ratt... 121 0.00014 1
UNIPROTKB|G5E5F8 - symbol:CORO2B "Coronin" species:9913 "... 119 0.00022 1
UNIPROTKB|E2REL6 - symbol:CORO2B "Coronin" species:9615 "... 119 0.00024 1
WARNING: Descriptions of 16 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2161253 [details] [associations]
symbol:MSI1 "MULTICOPY SUPRESSOR OF IRA1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0007275 "multicellular organismal development" evidence=IMP]
[GO:0016568 "chromatin modification" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0043234 "protein complex"
evidence=IPI] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009793
"embryo development ending in seed dormancy" evidence=IMP]
[GO:0031507 "heterochromatin assembly" evidence=RCA;IMP]
[GO:0009909 "regulation of flower development" evidence=RCA;IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0010026
"trichome differentiation" evidence=IMP] [GO:0048366 "leaf
development" evidence=IMP] [GO:0010214 "seed coat development"
evidence=IMP] [GO:0048316 "seed development" evidence=IMP]
[GO:0009555 "pollen development" evidence=IGI;IMP] [GO:0045787
"positive regulation of cell cycle" evidence=IGI;RCA] [GO:0080008
"Cul4-RING ubiquitin ligase complex" evidence=ISS] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IPI]
[GO:0006275 "regulation of DNA replication" evidence=RCA]
[GO:0009965 "leaf morphogenesis" evidence=RCA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=RCA]
[GO:0016570 "histone modification" evidence=RCA] [GO:0048449
"floral organ formation" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0009555 GO:GO:0010214 GO:GO:0008283
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 EMBL:AB019228 GO:GO:0009793 GO:GO:0009908
GO:GO:0048366 GO:GO:0009909 GO:GO:0006349 GO:GO:0016585
GO:GO:0045787 GO:GO:0031507 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 GO:GO:0010026 HOGENOM:HOG000160330
OMA:DGFLLHV EMBL:AF016846 EMBL:AY059874 EMBL:AY114646
IPI:IPI00535841 RefSeq:NP_200631.1 UniGene:At.49185
UniGene:At.66738 ProteinModelPortal:O22467 SMR:O22467
DIP:DIP-33481N IntAct:O22467 STRING:O22467 PaxDb:O22467
PRIDE:O22467 EnsemblPlants:AT5G58230.1 GeneID:835935
KEGG:ath:AT5G58230 GeneFarm:2813 TAIR:At5g58230 InParanoid:O22467
PhylomeDB:O22467 ProtClustDB:CLSN2683757 Genevestigator:O22467
GermOnline:AT5G58230 Uniprot:O22467
Length = 424
Score = 1336 (475.4 bits), Expect = 2.0e-136, P = 2.0e-136
Identities = 245/282 (86%), Positives = 258/282 (91%)
Query: 1 MGKDXXXXXXXXXXRLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD 60
MGKD RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEP GKD
Sbjct: 1 MGKDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPSGKD 60
Query: 61 YSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120
YSVQKMILGTHTSE+EPNYLMLAQVQLPLDD+E++AR YDDDRS+FGGFGCA GKVQIIQ
Sbjct: 61 YSVQKMILGTHTSESEPNYLMLAQVQLPLDDTESEARQYDDDRSEFGGFGCATGKVQIIQ 120
Query: 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180
QINHDGEVNRARYMPQNPF+IATKTV+AEVYVFDYSKHPSKPPLDGAC+PDL+LRGHS+E
Sbjct: 121 QINHDGEVNRARYMPQNPFIIATKTVNAEVYVFDYSKHPSKPPLDGACNPDLKLRGHSSE 180
Query: 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240
GYGLSWSKFK+GHLLSGSDDAQICLWDINA PKNKSL+A QIFK HEGVVEDVAWHLRHE
Sbjct: 181 GYGLSWSKFKQGHLLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHE 240
Query: 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
YLFGSVGDDQYLLIWDLR+PS SKPVQSVVAH EV N
Sbjct: 241 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFN 282
>UNIPROTKB|F2Z4M0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0031497 "chromatin assembly" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0035098 "ESC/E(Z)
complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 IPI:IPI00592914
EMBL:AADN02043764 ProteinModelPortal:F2Z4M0 SMR:F2Z4M0 PRIDE:F2Z4M0
Ensembl:ENSGALT00000005575 Uniprot:F2Z4M0
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q9W7I5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0033186
"CAF-1 complex" evidence=ISS] [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006338
"chromatin remodeling" evidence=ISS] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 CTD:5928
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:AF097750 IPI:IPI00592914
RefSeq:NP_990183.1 UniGene:Gga.1029 ProteinModelPortal:Q9W7I5
SMR:Q9W7I5 STRING:Q9W7I5 PRIDE:Q9W7I5 GeneID:395658 KEGG:gga:395658
InParanoid:Q9W7I5 NextBio:20815730 Uniprot:Q9W7I5
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q3MHL3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9913
"Bos taurus" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0006338 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
OMA:CQPDLRL GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0008094 HOGENOM:HOG000160330 EMBL:BT030530 EMBL:BC105195
IPI:IPI00717704 RefSeq:NP_001070481.1 UniGene:Bt.101874
ProteinModelPortal:Q3MHL3 SMR:Q3MHL3 STRING:Q3MHL3 PRIDE:Q3MHL3
Ensembl:ENSBTAT00000007758 GeneID:767940 KEGG:bta:767940 CTD:5928
HOVERGEN:HBG053236 InParanoid:Q3MHL3 OrthoDB:EOG4DBTDH
NextBio:20918297 Uniprot:Q3MHL3
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|E2QXR8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0031497 "chromatin
assembly" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 CTD:5928
EMBL:AAEX03001654 RefSeq:XP_864445.1 ProteinModelPortal:E2QXR8
SMR:E2QXR8 PRIDE:E2QXR8 Ensembl:ENSCAFT00000016755 GeneID:478149
KEGG:cfa:478149 NextBio:20853518 Uniprot:E2QXR8
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q09028 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=NAS;IDA] [GO:0016589 "NURF
complex" evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0031497 "chromatin
assembly" evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IDA] [GO:0000278 "mitotic
cell cycle" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006334 "nucleosome assembly" evidence=TAS] [GO:0034080 "CENP-A
containing nucleosome assembly at centromere" evidence=TAS]
[GO:0016580 "Sin3 complex" evidence=NAS] [GO:0042393 "histone
binding" evidence=NAS] [GO:0042826 "histone deacetylase binding"
evidence=IPI] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0008285 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:CH471059 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0035098
GO:GO:0042393 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000278
GO:GO:0016589 GO:GO:0033186 KO:K10752 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0016580 PDB:2XU7 PDBsum:2XU7
CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:X74262
EMBL:X71810 EMBL:BT007309 EMBL:AK299251 EMBL:AK312571 EMBL:AK222779
EMBL:AC114489 EMBL:BC003092 EMBL:BC015123 EMBL:BC053904
EMBL:BC075836 IPI:IPI00328319 IPI:IPI00645329 IPI:IPI00877802
IPI:IPI00877934 PIR:S36112 RefSeq:NP_001128727.1
RefSeq:NP_001128728.1 RefSeq:NP_005601.1 UniGene:Hs.16003 PDB:3GFC
PDBsum:3GFC ProteinModelPortal:Q09028 SMR:Q09028 DIP:DIP-33495N
IntAct:Q09028 MINT:MINT-90543 STRING:Q09028 PhosphoSite:Q09028
DMDM:1172846 PaxDb:Q09028 PRIDE:Q09028 DNASU:5928
Ensembl:ENST00000373485 Ensembl:ENST00000373493
Ensembl:ENST00000414241 Ensembl:ENST00000458695 GeneID:5928
KEGG:hsa:5928 UCSC:uc001bvr.3 UCSC:uc001bvs.3 GeneCards:GC01P033116
HGNC:HGNC:9887 HPA:CAB006264 MIM:602923 neXtProt:NX_Q09028
PharmGKB:PA34251 InParanoid:Q09028 PhylomeDB:Q09028 ChiTaRS:RBBP4
EvolutionaryTrace:Q09028 GenomeRNAi:5928 NextBio:23094
ArrayExpress:Q09028 Bgee:Q09028 CleanEx:HS_RBBP4
Genevestigator:Q09028 GermOnline:ENSG00000162521 Uniprot:Q09028
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q6P315 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8364
"Xenopus (Silurana) tropicalis" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
OMA:DGFLLHV HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC064219
RefSeq:NP_989285.1 UniGene:Str.17153 ProteinModelPortal:Q6P315
SMR:Q6P315 STRING:Q6P315 Ensembl:ENSXETT00000002157 GeneID:394900
KEGG:xtr:394900 Xenbase:XB-GENE-487909 InParanoid:Q6P315
Uniprot:Q6P315
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 174/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQIPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFN 281
>MGI|MGI:1194912 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4"
species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO;TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=ISO;IDA] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0031497 "chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1
complex" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO;IDA] [GO:0042826 "histone deacetylase binding"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1194912 EMBL:CH466552 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 EMBL:AL607123 GO:GO:0016589
GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752 OMA:CQPDLRL
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH
EMBL:U35141 EMBL:CU234133 EMBL:BC138568 EMBL:BC138570
IPI:IPI00828412 PIR:I49366 RefSeq:NP_033056.2 UniGene:Mm.12145
ProteinModelPortal:Q60972 SMR:Q60972 DIP:DIP-32855N IntAct:Q60972
STRING:Q60972 PhosphoSite:Q60972 REPRODUCTION-2DPAGE:Q60972
PaxDb:Q60972 PRIDE:Q60972 Ensembl:ENSMUST00000102598 GeneID:19646
KEGG:mmu:19646 InParanoid:A2A875 NextBio:296894 Bgee:Q60972
CleanEx:MM_RBBP4 Genevestigator:Q60972
GermOnline:ENSMUSG00000057236 Uniprot:Q60972
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>RGD|1593768 [details] [associations]
symbol:Rbbp4 "retinoblastoma binding protein 4" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=IEA;ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IEA;ISO] [GO:0016581 "NuRD complex"
evidence=IEA;ISO] [GO:0016589 "NURF complex" evidence=IEA;ISO]
[GO:0031497 "chromatin assembly" evidence=IEA;ISO] [GO:0033186
"CAF-1 complex" evidence=IEA;ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=IEA;ISO] [GO:0042826 "histone deacetylase binding"
evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1593768 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338 GO:GO:0031497
GO:GO:0016589 GO:GO:0033186 GeneTree:ENSGT00570000079069 KO:K10752
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094
EMBL:CH473968 HOGENOM:HOG000160330 CTD:5928 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC168994 IPI:IPI00366789
RefSeq:NP_001101382.1 UniGene:Rn.224577 SMR:B5DFB2 STRING:B5DFB2
Ensembl:ENSRNOT00000029177 GeneID:313048 KEGG:rno:313048
NextBio:665530 Genevestigator:B5DFB2 Uniprot:B5DFB2
Length = 425
Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q8AVH1 [details] [associations]
symbol:rbbp7 "Histone-binding protein RBBP7" species:8355
"Xenopus laevis" [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 CTD:5931 KO:K11659 EMBL:BC042283
RefSeq:NP_001080364.1 UniGene:Xl.55215 ProteinModelPortal:Q8AVH1
SMR:Q8AVH1 PRIDE:Q8AVH1 GeneID:380056 KEGG:xla:380056
Xenbase:XB-GENE-487913 Uniprot:Q8AVH1
Length = 425
Score = 942 (336.7 bits), Expect = 1.1e-94, P = 1.1e-94
Identities = 173/269 (64%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVTRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD++ DA HYD ++ +FGGFG +GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQVPNDDAQFDASHYDSEKGEFGGFGSVSGKIETEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT SA+V VFDY+KHPSKP G CSPDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPCIIATKTPSADVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A +F H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDISAGPKEGKVVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHSVDAHTAEVNCLSFN 281
>UNIPROTKB|Q5RF92 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9601
"Pongo abelii" [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0007049
GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 CTD:5928 HOVERGEN:HBG053236
EMBL:CR857269 RefSeq:NP_001124686.1 UniGene:Pab.10290
UniGene:Pab.17706 ProteinModelPortal:Q5RF92 SMR:Q5RF92
GeneID:100461561 KEGG:pon:100461561 InParanoid:Q5RF92
Uniprot:Q5RF92
Length = 425
Score = 938 (335.3 bits), Expect = 3.0e-94, P = 3.0e-94
Identities = 172/269 (63%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEE+KIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEHKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q5M7K4 [details] [associations]
symbol:rbbp4 "Histone-binding protein RBBP4" species:8364
"Xenopus (Silurana) tropicalis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351
GO:GO:0016568 GO:GO:0007049 GO:GO:0035098 GO:GO:0031497
GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH EMBL:BC088588 UniGene:Str.6093
ProteinModelPortal:Q5M7K4 SMR:Q5M7K4 STRING:Q5M7K4
Xenbase:XB-GENE-482002 InParanoid:Q5M7K4 Uniprot:Q5M7K4
Length = 425
Score = 936 (334.5 bits), Expect = 4.8e-94, P = 4.8e-94
Identities = 172/269 (63%), Positives = 209/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q6INH0 [details] [associations]
symbol:rbbp4-b "Histone-binding protein RBBP4-B"
species:8355 "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0031497
"chromatin assembly" evidence=ISS] [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0006338 GO:GO:0007049 GO:GO:0035098
GO:GO:0031497 GO:GO:0033186 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOVERGEN:HBG053236 EMBL:BC072311 RefSeq:NP_001085185.1
UniGene:Xl.86906 ProteinModelPortal:Q6INH0 SMR:Q6INH0 PRIDE:Q6INH0
DNASU:432269 GeneID:432269 KEGG:xla:432269 CTD:432269
Xenbase:XB-GENE-6255728 Uniprot:Q6INH0
Length = 425
Score = 935 (334.2 bits), Expect = 6.1e-94, P = 6.1e-94
Identities = 172/269 (63%), Positives = 208/269 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S +V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPSCDVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>ZFIN|ZDB-GENE-030131-445 [details] [associations]
symbol:rbb4 "retinoblastoma binding protein 4"
species:7955 "Danio rerio" [GO:0033186 "CAF-1 complex"
evidence=ISS] [GO:0031497 "chromatin assembly" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-445
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 EMBL:BX465206
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
IPI:IPI00995625 Ensembl:ENSDART00000130326 ArrayExpress:E7FEX2
Bgee:E7FEX2 Uniprot:E7FEX2
Length = 444
Score = 923 (330.0 bits), Expect = 1.1e-92, P = 1.1e-92
Identities = 170/269 (63%), Positives = 207/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD P GKD+SV +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFSVHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +INH+GEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT +++V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ G L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECTPDLRLRGHQKEGYGLSWNPNLSGCL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+ PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISTVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP +V AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHAVDAHTAEVNCLSFN 282
>FB|FBgn0263979 [details] [associations]
symbol:Caf1 "Chromatin assembly factor 1 subunit"
species:7227 "Drosophila melanogaster" [GO:0016584 "nucleosome
positioning" evidence=IDA] [GO:0042826 "histone deacetylase
binding" evidence=ISS;IDA] [GO:0031497 "chromatin assembly"
evidence=ISS;IDA] [GO:0033186 "CAF-1 complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0042393 "histone
binding" evidence=IDA;NAS;TAS] [GO:0016590 "ACF complex"
evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS] [GO:0006334
"nucleosome assembly" evidence=NAS;IDA] [GO:0016573 "histone
acetylation" evidence=ISS;IDA] [GO:0016589 "NURF complex"
evidence=NAS;TAS;IPI] [GO:0035035 "histone acetyltransferase
binding" evidence=ISS;IPI] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=NAS] [GO:0003682 "chromatin binding" evidence=NAS]
[GO:0006342 "chromatin silencing" evidence=IPI] [GO:0006351
"transcription, DNA-dependent" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0046976
"histone methyltransferase activity (H3-K27 specific)" evidence=IC]
[GO:0046974 "histone methyltransferase activity (H3-K9 specific)"
evidence=IC] [GO:0016571 "histone methylation" evidence=IDA]
[GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0007307 "eggshell
chorion gene amplification" evidence=IC] [GO:0031523 "Myb complex"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016581 "NuRD complex" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0031491
"nucleosome binding" evidence=IDA] [GO:0042054 "histone
methyltransferase activity" evidence=IDA] [GO:0035097 "histone
methyltransferase complex" evidence=IDA] [GO:0007517 "muscle organ
development" evidence=IMP] [GO:0048813 "dendrite morphogenesis"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0048812 "neuron projection morphogenesis" evidence=IMP]
[GO:0070822 "Sin3-type complex" evidence=IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0008284 "positive regulation of
cell proliferation" evidence=IMP] [GO:0061085 "regulation of
histone H3-K27 methylation" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE014297 GO:GO:0007346
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008284 GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016573 GO:GO:0006351
GO:GO:0005667 GO:GO:0000122 GO:GO:0000910 GO:GO:0048813
GO:GO:0007517 GO:GO:0035098 GO:GO:0007379 GO:GO:0006342
GO:GO:0051567 GO:GO:0042393 GO:GO:0005700 GO:GO:0042826
GO:GO:0035035 GO:GO:0042766 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0033186 EMBL:U62388 EMBL:AM294392 EMBL:AM294393
EMBL:AM294394 EMBL:AM294395 EMBL:AM294396 EMBL:AM294397
EMBL:AM294398 EMBL:AM294399 EMBL:AM294400 EMBL:AM294401
EMBL:AM294402 EMBL:AM294403 EMBL:AY061408 RefSeq:NP_524354.1
UniGene:Dm.1657 PDB:2XYI PDB:2YB8 PDB:2YBA PDB:3C99 PDB:3C9C
PDBsum:2XYI PDBsum:2YB8 PDBsum:2YBA PDBsum:3C99 PDBsum:3C9C
ProteinModelPortal:Q24572 SMR:Q24572 DIP:DIP-23697N IntAct:Q24572
MINT:MINT-252601 STRING:Q24572 PaxDb:Q24572 PRIDE:Q24572
EnsemblMetazoa:FBtr0083052 GeneID:41836 KEGG:dme:Dmel_CG4236
CTD:41836 FlyBase:FBgn0263347 GeneTree:ENSGT00570000079069
InParanoid:Q24572 KO:K10752 OMA:CQPDLRL OrthoDB:EOG4ZCRKP
PhylomeDB:Q24572 EvolutionaryTrace:Q24572 GenomeRNAi:41836
NextBio:825799 Bgee:Q24572 GermOnline:CG4236 GO:GO:0031523
GO:GO:0016581 GO:GO:0070822 GO:GO:0007307 GO:GO:0070734
InterPro:IPR022052 Pfam:PF12265 Uniprot:Q24572
Length = 430
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 171/269 (63%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WLPD + GKDYSV ++ILGTHTS+
Sbjct: 19 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD 78
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP +D++ D HYD+++ +FGGFG GK++I +INH+GEVNRARYM
Sbjct: 79 -EQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYM 137
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQN +IATKT S++V VFDY+KHPSKP G C PDLRLRGH EGYGLSW+ G+L
Sbjct: 138 PQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYL 197
Query: 195 LSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDINA PK ++ ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 198 LSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLM 257
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R + SKP +V AH +EV N
Sbjct: 258 IWDTRNNNTSKPSHTVDAHTAEVNCLSFN 286
>ZFIN|ZDB-GENE-030131-848 [details] [associations]
symbol:rbb4l "retinoblastoma binding protein 4,
like" species:7955 "Danio rerio" [GO:0035098 "ESC/E(Z) complex"
evidence=ISS] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-030131-848 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568 GO:GO:0035098
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC052110 EMBL:BC067546 IPI:IPI00996854
RefSeq:NP_997775.1 UniGene:Dr.75908 ProteinModelPortal:Q7ZTY4
SMR:Q7ZTY4 STRING:Q7ZTY4 PRIDE:Q7ZTY4 Ensembl:ENSDART00000008144
GeneID:322129 KEGG:dre:322129 CTD:322129 NextBio:20807686
ArrayExpress:Q7ZTY4 Bgee:Q7ZTY4 Uniprot:Q7ZTY4
Length = 426
Score = 921 (329.3 bits), Expect = 1.9e-92, P = 1.9e-92
Identities = 171/270 (63%), Positives = 208/270 (77%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY V +++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPEGKDYVVHRLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDR-SDFGGFGCANGKVQIIQQINHDGEVNRARY 133
E N+L++A Q+P DD++ DA HYD ++ ++FGGFG +GK++I +INH+GEVNRARY
Sbjct: 74 -EQNHLVIASAQIPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIKINHEGEVNRARY 132
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
MPQNP +IATKT +++V FDY+KHPSKP G CSPDLRLRGH EGYGLSW+ G+
Sbjct: 133 MPQNPCIIATKTPTSDVLAFDYTKHPSKPDPSGDCSPDLRLRGHQKEGYGLSWNPNLSGN 192
Query: 194 LLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
LLS SDD ICLWDI+ APK K ++A IF H VVEDV+WHL HE LFGSV DDQ L
Sbjct: 193 LLSASDDHTICLWDISGAPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKL 252
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
+IWD R+ + SKP SV AH +EV N
Sbjct: 253 MIWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q9I8G9 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9031
"Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0030308
"negative regulation of cell growth" evidence=IEA] [GO:0070370
"cellular heat acclimation" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0016581 "NuRD complex" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:AF279275 IPI:IPI00594478
PIR:JC7558 RefSeq:NP_990001.1 UniGene:Gga.202
ProteinModelPortal:Q9I8G9 SMR:Q9I8G9 STRING:Q9I8G9 PRIDE:Q9I8G9
Ensembl:ENSGALT00000026698 GeneID:395390 KEGG:gga:395390
InParanoid:Q9I8G9 NextBio:20815474 Uniprot:Q9I8G9
Length = 424
Score = 920 (328.9 bits), Expect = 2.4e-92, P = 2.4e-92
Identities = 170/269 (63%), Positives = 207/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+I+EEYKIWKKNTPFLYDLV+THALEWPSLTV+WLPD P GKDY++ ++LGTHTS+
Sbjct: 14 RVISEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVSRPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+VQ+P DD + D YD ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVQIPNDD-QFDTSQYDSEKGEFGGFGSVTGKIETEIKINHEGEVNRARYM 131
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP++IATKT SA+V VFDY+KHPSKP G C+PDLRLRGH EGYGLSW+ +GHL
Sbjct: 132 PQNPYIIATKTPSADVLVFDYTKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNSNLKGHL 191
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDI+A PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 192 LSASDDHTVCLWDISAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 251
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 252 IWDTRSNTTSKPSHSVDAHTAEVNCLSFN 280
>UNIPROTKB|Q16576 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IDA] [GO:0030308 "negative regulation of cell growth"
evidence=IDA] [GO:0035098 "ESC/E(Z) complex" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070370 "cellular
heat acclimation" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0008283 "cell
proliferation" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0034080 "CENP-A containing nucleosome assembly at centromere"
evidence=TAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0007275
Pathway_Interaction_DB:telomerasepathway Reactome:REACT_115566
GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008283 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0000122
GO:GO:0035098 Pathway_Interaction_DB:hedgehog_glipathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0034080
Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 PDB:3CFS PDB:3CFV
PDBsum:3CFS PDBsum:3CFV HOGENOM:HOG000160330 OMA:DGFLLHV
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35143
EMBL:X72841 EMBL:AK091911 EMBL:AL929302 IPI:IPI00395865
IPI:IPI00646512 PIR:I39181 RefSeq:NP_001185648.1 RefSeq:NP_002884.1
UniGene:Hs.495755 ProteinModelPortal:Q16576 SMR:Q16576 DIP:DIP-436N
IntAct:Q16576 MINT:MINT-90512 STRING:Q16576 PhosphoSite:Q16576
DMDM:2494891 PaxDb:Q16576 PeptideAtlas:Q16576 PRIDE:Q16576
Ensembl:ENST00000380084 Ensembl:ENST00000380087 GeneID:5931
KEGG:hsa:5931 UCSC:uc004cxt.3 GeneCards:GC0XM016772 HGNC:HGNC:9890
HPA:CAB037084 MIM:300825 neXtProt:NX_Q16576 PharmGKB:PA34254
PhylomeDB:Q16576 ChiTaRS:RBBP7 EvolutionaryTrace:Q16576
GenomeRNAi:5931 NextBio:23110 PMAP-CutDB:Q16576 ArrayExpress:Q16576
Bgee:Q16576 CleanEx:HS_RBBP7 Genevestigator:Q16576
GermOnline:ENSG00000102054 Uniprot:Q16576
Length = 425
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 168/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>UNIPROTKB|O93377 [details] [associations]
symbol:rbbp4-a "Histone-binding protein RBBP4-A"
species:8355 "Xenopus laevis" [GO:0031497 "chromatin assembly"
evidence=ISS] [GO:0033186 "CAF-1 complex" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0007049 GO:GO:0035098 GO:GO:0031497 GO:GO:0033186 KO:K10752
InterPro:IPR022052 Pfam:PF12265 HOVERGEN:HBG053236 EMBL:AF073787
EMBL:BC077257 RefSeq:NP_001083811.1 UniGene:Xl.537
ProteinModelPortal:O93377 SMR:O93377 PRIDE:O93377 GeneID:399131
KEGG:xla:399131 CTD:399131 Xenbase:XB-GENE-482006 Uniprot:O93377
Length = 425
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 169/269 (62%), Positives = 207/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THALEWPSLT +WL D P GKD+S+ +++LGTHTS+
Sbjct: 15 RVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLSDVTRPDGKDFSIHRLVLGTHTSD 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A VQLP DD++ DA HYD ++ +FGGFG +GK++I +I HDGEVNRARYM
Sbjct: 75 -EQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKITHDGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT +++V VFDY+KHPSKP G C+P+LRLRGH EGYGLSW+ G+L
Sbjct: 134 PQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECNPNLRLRGHQKEGYGLSWNPNLSGNL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K ++A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV AH +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAHTAEVNCLSFN 282
>UNIPROTKB|Q4R304 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9541
"Macaca fascicularis" [GO:0016581 "NuRD complex" evidence=ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular
heat acclimation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0035098 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOVERGEN:HBG053236
EMBL:AB179464 ProteinModelPortal:Q4R304 SMR:Q4R304 PRIDE:Q4R304
Uniprot:Q4R304
Length = 425
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 168/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>MGI|MGI:1194910 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016581
"NuRD complex" evidence=ISO;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=ISO] [GO:0035098 "ESC/E(Z) complex"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0070370 "cellular heat
acclimation" evidence=ISO;ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1194910 GO:GO:0030308
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
GO:GO:0035098 GeneTree:ENSGT00570000079069 GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370 HOGENOM:HOG000160330
HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931 KO:K11659 EMBL:U35142
EMBL:AK076016 EMBL:AK135779 EMBL:AK135956 EMBL:AK136110
EMBL:AK145531 EMBL:AK145651 EMBL:AK146014 EMBL:AK146904
EMBL:AK146967 EMBL:AK147062 EMBL:AK148852 EMBL:AK153913
EMBL:AK160023 EMBL:AL672123 EMBL:BC003785 IPI:IPI00122698
PIR:I49367 RefSeq:NP_033057.3 UniGene:Mm.270186 UniGene:Mm.486181
ProteinModelPortal:Q60973 SMR:Q60973 IntAct:Q60973 STRING:Q60973
PhosphoSite:Q60973 REPRODUCTION-2DPAGE:Q60973 PaxDb:Q60973
PRIDE:Q60973 Ensembl:ENSMUST00000033720 GeneID:245688
KEGG:mmu:245688 InParanoid:A2AFJ0 NextBio:386918 Bgee:Q60973
CleanEx:MM_RBBP7 Genevestigator:Q60973
GermOnline:ENSMUSG00000031353 Uniprot:Q60973
Length = 425
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 168/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>RGD|620125 [details] [associations]
symbol:Rbbp7 "retinoblastoma binding protein 7" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;ISS]
[GO:0030308 "negative regulation of cell growth" evidence=ISO;ISS]
[GO:0035098 "ESC/E(Z) complex" evidence=ISO;ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070370 "cellular heat acclimation" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:620125 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 HOVERGEN:HBG053236 OrthoDB:EOG4DBTDH CTD:5931
KO:K11659 EMBL:AF090306 EMBL:BC062012 IPI:IPI00194285
RefSeq:NP_114004.1 UniGene:Rn.3600 ProteinModelPortal:Q71UF4
SMR:Q71UF4 STRING:Q71UF4 PRIDE:Q71UF4 Ensembl:ENSRNOT00000066676
GeneID:83712 KEGG:rno:83712 UCSC:RGD:620125 InParanoid:Q71UF4
NextBio:616281 ArrayExpress:Q71UF4 Genevestigator:Q71UF4
GermOnline:ENSRNOG00000005157 Uniprot:Q71UF4
Length = 425
Score = 918 (328.2 bits), Expect = 3.9e-92, P = 3.9e-92
Identities = 168/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>UNIPROTKB|Q3SWX8 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9913
"Bos taurus" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0070370
"cellular heat acclimation" evidence=ISS] [GO:0035098 "ESC/E(Z)
complex" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0000122 GO:GO:0035098 GeneTree:ENSGT00570000079069
GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265 GO:GO:0070370
HOGENOM:HOG000160330 OMA:DGFLLHV HOVERGEN:HBG053236
OrthoDB:EOG4DBTDH EMBL:BC104613 IPI:IPI00709403
RefSeq:NP_001029810.1 UniGene:Bt.4908 ProteinModelPortal:Q3SWX8
SMR:Q3SWX8 STRING:Q3SWX8 PRIDE:Q3SWX8 Ensembl:ENSBTAT00000029923
GeneID:537402 KEGG:bta:537402 CTD:5931 InParanoid:Q3SWX8 KO:K11659
NextBio:20877129 Uniprot:Q3SWX8
Length = 425
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 167/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>UNIPROTKB|E2RM49 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
CTD:5931 KO:K11659 EMBL:AAEX03026166 RefSeq:XP_857851.1
ProteinModelPortal:E2RM49 Ensembl:ENSCAFT00000020249 GeneID:480854
KEGG:cfa:480854 NextBio:20855780 Uniprot:E2RM49
Length = 425
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 167/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>UNIPROTKB|E2RM67 [details] [associations]
symbol:RBBP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070370 "cellular heat acclimation"
evidence=IEA] [GO:0035098 "ESC/E(Z) complex" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0016581 "NuRD complex" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 OMA:DGFLLHV CTD:5931 KO:K11659 EMBL:AAEX03026166
GeneID:480854 KEGG:cfa:480854 NextBio:20855780 RefSeq:XP_849201.1
ProteinModelPortal:E2RM67 Ensembl:ENSCAFT00000020227 Uniprot:E2RM67
Length = 469
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 167/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 325
>UNIPROTKB|F1SQR0 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0070370 "cellular heat acclimation" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0016581 "NuRD complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0030308 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000122 GO:GO:0035098
GeneTree:ENSGT00570000079069 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 KO:K11659 EMBL:CU463287 RefSeq:XP_003135004.1
ProteinModelPortal:F1SQR0 Ensembl:ENSSSCT00000013288
GeneID:100519001 KEGG:ssc:100519001 Uniprot:F1SQR0
Length = 425
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 167/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 253 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>UNIPROTKB|I3LV46 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OMA:DGFLLHV KO:K11659 EMBL:CU463287
GeneID:100519001 KEGG:ssc:100519001 RefSeq:XP_003360284.1
Ensembl:ENSSSCT00000024779 Uniprot:I3LV46
Length = 469
Score = 914 (326.8 bits), Expect = 1.0e-91, P = 1.0e-91
Identities = 167/269 (62%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 237 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 296
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 297 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 325
>UNIPROTKB|Q5R654 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9601
"Pongo abelii" [GO:0016581 "NuRD complex" evidence=ISS] [GO:0030308
"negative regulation of cell growth" evidence=ISS] [GO:0035098
"ESC/E(Z) complex" evidence=ISS] [GO:0070370 "cellular heat
acclimation" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0030308 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0035098 GO:GO:0016581 InterPro:IPR022052 Pfam:PF12265
GO:GO:0070370 HOVERGEN:HBG053236 EMBL:CR860642 UniGene:Pab.19680
ProteinModelPortal:Q5R654 InParanoid:Q5R654 Uniprot:Q5R654
Length = 426
Score = 910 (325.4 bits), Expect = 2.7e-91, P = 2.7e-91
Identities = 166/269 (61%), Positives = 205/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 132
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S+ V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 133 PQNPHIIATKTPSSGVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 192
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A +F H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 193 LSASDDHTVCLWDINAGPKEGKIVDAKAVFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 252
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
+WD R+ + SKP V AH +EV N
Sbjct: 253 MWDTRSNTTSKPSHLVDAHTAEVNCLSFN 281
>RGD|1563620 [details] [associations]
symbol:RGD1563620 "similar to retinoblastoma binding protein 4"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1563620 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 OrthoDB:EOG4DBTDH IPI:IPI00368073
ProteinModelPortal:D4A250 Ensembl:ENSRNOT00000033132 Uniprot:D4A250
Length = 425
Score = 890 (318.4 bits), Expect = 3.6e-89, P = 3.6e-89
Identities = 163/269 (60%), Positives = 205/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWK NTPFLYDLV+THALEWPSLT +WLPD P GKD+ + +++LGTHTS+
Sbjct: 15 RVINEEYKIWK-NTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGKDFGIHRLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
+ ++L++A VQLP DD++ DA +YD ++ +FGGFG +GK++I +IN++GEVNRARYM
Sbjct: 74 EQNHHLVIASVQLPNDDAQFDASYYDSEKGEFGGFGSVSGKIEIEIKINYEGEVNRARYM 133
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHPSKP G C+ DL LRGH EGYGLSW+ + G+L
Sbjct: 134 PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECNSDLHLRGHQKEGYGLSWNPYLSGYL 193
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD ICLWDI+A PK K + A IF H VVEDV+WHL HE LFGSV DDQ L+
Sbjct: 194 LSASDDHTICLWDISAVPKEGKVVGAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM 253
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP SV A+ +EV N
Sbjct: 254 IWDTRSNNTSKPSHSVDAYTAEVNCLSFN 282
>DICTYBASE|DDB_G0282529 [details] [associations]
symbol:rbbD "putative Retinoblastoma (Rb) binding
protein" species:44689 "Dictyostelium discoideum" [GO:0016568
"chromatin modification" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0282529 GO:GO:0005634
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AAFI02000047 GenomeReviews:CM000152_GR
GO:GO:0006260 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 KO:K10752 OMA:CQPDLRL
InterPro:IPR022052 Pfam:PF12265 RefSeq:XP_640105.1
ProteinModelPortal:Q54SD4 SMR:Q54SD4 STRING:Q54SD4 PRIDE:Q54SD4
EnsemblProtists:DDB0232003 GeneID:8623636 KEGG:ddi:DDB_G0282529
ProtClustDB:CLSZ2430461 Uniprot:Q54SD4
Length = 423
Score = 883 (315.9 bits), Expect = 2.0e-88, P = 2.0e-88
Identities = 161/269 (59%), Positives = 206/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
++INEEYKIWK++TPFLYD+VITHALEWPSLTV WLP + P K YS++K+ILGTHTS+
Sbjct: 11 KVINEEYKIWKRHTPFLYDMVITHALEWPSLTVAWLPVKTSQPNKPYSIEKVILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E NYLM+A+V LP+D++ ++ YDD + + GG G + K++IIQ+INH+GEVNRAR M
Sbjct: 71 EEQNYLMVAKVHLPVDEASIESLKYDDTKGEVGGIGNVSEKIEIIQKINHEGEVNRARVM 130
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQN +IATKTVS+EVY+FD +KHP +P DG CSP+L+L GH EGYG+SW+ KEGHL
Sbjct: 131 PQNHSIIATKTVSSEVYIFDTTKHPLEPTPDGKCSPNLKLTGHKKEGYGISWNPRKEGHL 190
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD IC+WDI+AA K+ S L+A+ I+ H +VEDVAWH H+ FGSVGDD+ L+
Sbjct: 191 LSCSDDQSICMWDISAASKSDSTLDALNIYNGHTSIVEDVAWHYIHDTFFGSVGDDKKLM 250
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD RT + KP+ V AH SEV N
Sbjct: 251 IWDTRTGT--KPIHVVEAHNSEVNCLSFN 277
>UNIPROTKB|E9PC52 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00879702 ProteinModelPortal:E9PC52 SMR:E9PC52
PRIDE:E9PC52 Ensembl:ENST00000404022 ArrayExpress:E9PC52
Bgee:E9PC52 Uniprot:E9PC52
Length = 416
Score = 862 (308.5 bits), Expect = 3.3e-86, P = 3.3e-86
Identities = 163/269 (60%), Positives = 200/269 (74%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D D+ GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSDKG---------GKIECEIKINHEGEVNRARYM 123
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 124 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 183
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 272
>UNIPROTKB|K7GRD3 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GeneTree:ENSGT00570000079069 InterPro:IPR022052
Pfam:PF12265 EMBL:CU463287 Ensembl:ENSSSCT00000034836
Uniprot:K7GRD3
Length = 416
Score = 858 (307.1 bits), Expect = 8.9e-86, P = 8.9e-86
Identities = 162/269 (60%), Positives = 200/269 (74%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 14 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ GK++ +INH+GEVNRARYM
Sbjct: 74 -EQNHLVVARVHIPNDDAQFDASHCDSEKG---------GKIECEIKINHEGEVNRARYM 123
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 124 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 183
Query: 195 LSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +CLWDINA PK K ++A IF H VVEDVAWHL HE LFGSV DDQ L+
Sbjct: 184 LSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLM 243
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD R+ + SKP V AH +EV N
Sbjct: 244 IWDTRSNTTSKPSHLVDAHTAEVNCLSFN 272
>UNIPROTKB|I3LKT8 [details] [associations]
symbol:RBBP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042826 "histone deacetylase binding" evidence=IEA]
[GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0033186 "CAF-1
complex" evidence=IEA] [GO:0031497 "chromatin assembly"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0016581
"NuRD complex" evidence=IEA] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006338
GO:GO:0031497 GO:GO:0016589 GO:GO:0033186
GeneTree:ENSGT00570000079069 OMA:CQPDLRL GO:GO:0016581
InterPro:IPR022052 Pfam:PF12265 GO:GO:0008094 EMBL:FP312679
EMBL:FP325261 ProteinModelPortal:I3LKT8 PRIDE:I3LKT8
Ensembl:ENSSSCT00000023350 Uniprot:I3LKT8
Length = 390
Score = 831 (297.6 bits), Expect = 6.4e-83, P = 6.4e-83
Identities = 153/248 (61%), Positives = 188/248 (75%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY 155
A HYD ++ +FGGFG +GK++I +INH+GEVNRARYMPQNP +IATKT S++V VFDY
Sbjct: 60 ASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYMPQNPCIIATKTPSSDVLVFDY 119
Query: 156 SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN- 214
+KHPSKP G C+PDLRLRGH EGYGLSW+ GHLLS SDD ICLWDI+A PK
Sbjct: 120 TKHPSKPDPSGECNPDLRLRGHQKEGYGLSWNPNLSGHLLSASDDHTICLWDISAVPKEG 179
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274
K ++A IF H VVEDV+WHL HE LFGSV DDQ L+IWD R+ + SKP SV AH +
Sbjct: 180 KVVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLMIWDTRSNNTSKPSHSVDAHTA 239
Query: 275 EVGVSILN 282
EV N
Sbjct: 240 EVNCLSFN 247
>UNIPROTKB|Q61Y48 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6238 "Caenorhabditis briggsae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0009790 "embryo development" evidence=ISS]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0040035 "hermaphrodite genitalia development"
evidence=ISS] [GO:0042826 "histone deacetylase binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0017053 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0042826
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000160330 EMBL:HE600990
ProteinModelPortal:Q61Y48 SMR:Q61Y48 STRING:Q61Y48 PRIDE:Q61Y48
EnsemblMetazoa:CBG03710 WormBase:CBG03710 Uniprot:Q61Y48
Length = 416
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 155/269 (57%), Positives = 205/269 (76%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLP+ E+ D++V ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPEIEKE-SSDHTVHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P D+++ DA YD +R +FGGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDEAQFDASRYDTERGEFGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P +IATK+ SA+VY+FDY+K+PS P D +P L+L+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKPTIIATKSPSADVYIFDYTKYPSVPK-DNTFNPLLKLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINA-APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDIN A N L+A +IFK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINGNAGANGELKAREIFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWDLRT + P ++ AH +EV N
Sbjct: 249 IWDLRT---NVPGHAIDAHSAEVNCLAFN 274
>WB|WBGene00003036 [details] [associations]
symbol:lin-53 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040027
"negative regulation of vulval development" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048557
"embryonic digestive tract morphogenesis" evidence=IGI] [GO:0005634
"nucleus" evidence=IDA] [GO:0045138 "tail tip morphogenesis"
evidence=IMP] [GO:0001708 "cell fate specification" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0070176 "DRM
complex" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0045892 GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0016568
GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330 EMBL:AF116530
EMBL:Z81097 EMBL:AL023833 PIR:T23391 RefSeq:NP_492552.1
UniGene:Cel.19610 ProteinModelPortal:P90916 SMR:P90916
IntAct:P90916 MINT:MINT-114323 STRING:P90916 PaxDb:P90916
EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2 GeneID:172802
KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802 WormBase:K07A1.12
InParanoid:P90916 OMA:DGFLLHV NextBio:877063 GO:GO:0070176
Uniprot:P90916
Length = 417
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 151/269 (56%), Positives = 198/269 (73%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD + D+++ ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P DD++ DA YD +RS++GGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ +IATK+ A+VY+FDY KH S P D +P +RL+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDINA L+A +FK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD+RT S P + AH +EV N
Sbjct: 249 IWDVRT---STPGHCIDAHSAEVNCLAFN 274
>UNIPROTKB|P90916 [details] [associations]
symbol:lin-53 "Probable histone-binding protein lin-53"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0042826 "histone deacetylase binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0009790
"embryo development" evidence=IMP] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0070176
"DRM complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0017053
"transcriptional repressor complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0001708 GO:GO:0009792 GO:GO:0006915 GO:GO:0045892
GO:GO:0002119 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GO:GO:0040027 GeneTree:ENSGT00570000079069 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0048557 HOGENOM:HOG000160330
EMBL:AF116530 EMBL:Z81097 EMBL:AL023833 PIR:T23391
RefSeq:NP_492552.1 UniGene:Cel.19610 ProteinModelPortal:P90916
SMR:P90916 IntAct:P90916 MINT:MINT-114323 STRING:P90916
PaxDb:P90916 EnsemblMetazoa:K07A1.12.1 EnsemblMetazoa:K07A1.12.2
GeneID:172802 KEGG:cel:CELE_K07A1.12 UCSC:K07A1.12.1 CTD:172802
WormBase:K07A1.12 InParanoid:P90916 OMA:DGFLLHV NextBio:877063
GO:GO:0070176 Uniprot:P90916
Length = 417
Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
Identities = 151/269 (56%), Positives = 198/269 (73%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+ N+EYKIWKKNTPFLYDLV+THALEWPSL+V+WLPD + D+++ ++ILGTHTS+
Sbjct: 12 RVANDEYKIWKKNTPFLYDLVMTHALEWPSLSVQWLPDVAKD-NSDHTIHRLILGTHTSD 70
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L+++++ +P DD++ DA YD +RS++GGFG NGKV+ +INH+GEVNRARYM
Sbjct: 71 -EQNHLLISKICMPTDDAQFDASRYDTERSEYGGFGAVNGKVEPDIRINHEGEVNRARYM 129
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ +IATK+ A+VY+FDY KH S P D +P +RL+GH+ EGYGLSW+ KEG +
Sbjct: 130 PQKSNIIATKSPHADVYIFDYLKH-SAVPRDNTFNPLIRLKGHTKEGYGLSWNPNKEGLI 188
Query: 195 LSGSDDAQICLWDINAAPKNKS-LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
LS SDD +C WDINA L+A +FK HE VVEDVAWH+ H+ +FGSVGDD+ LL
Sbjct: 189 LSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLHDGVFGSVGDDKKLL 248
Query: 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
IWD+RT S P + AH +EV N
Sbjct: 249 IWDVRT---STPGHCIDAHSAEVNCLAFN 274
>UNIPROTKB|K7GKX8 [details] [associations]
symbol:LOC100519001 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00570000079069
InterPro:IPR022052 Pfam:PF12265 EMBL:CU463287
Ensembl:ENSSSCT00000032853 Uniprot:K7GKX8
Length = 254
Score = 732 (262.7 bits), Expect = 2.0e-72, P = 2.0e-72
Identities = 128/198 (64%), Positives = 161/198 (81%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
R+INEEYKIWKKNTPFLYDLV+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+
Sbjct: 58 RVINEEYKIWKKNTPFLYDLVMTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD 117
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
E N+L++A+V +P DD++ DA H D ++ +FGGFG GK++ +INH+GEVNRARYM
Sbjct: 118 -EQNHLVVARVHIPNDDAQFDASHCDSEKGEFGGFGSVTGKIECEIKINHEGEVNRARYM 176
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQNP +IATKT S++V VFDY+KHP+KP G C+PDLRLRGH EGYGLSW+ GHL
Sbjct: 177 PQNPHIIATKTPSSDVLVFDYTKHPAKPDPSGECNPDLRLRGHQKEGYGLSWNSNLSGHL 236
Query: 195 LSGSDDAQICLWDINAAP 212
LS SDD +CLWDINA P
Sbjct: 237 LSASDDHTVCLWDINAGP 254
>TAIR|locus:2131551 [details] [associations]
symbol:MSI3 "MULTICOPY SUPPRESSOR OF IRA1 3" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0005515 "protein binding" evidence=IPI] [GO:0080008 "Cul4-RING
ubiquitin ligase complex" evidence=IPI] [GO:0000278 "mitotic cell
cycle" evidence=RCA] [GO:0006396 "RNA processing" evidence=RCA]
[GO:0006406 "mRNA export from nucleus" evidence=RCA] [GO:0006606
"protein import into nucleus" evidence=RCA] [GO:0009560 "embryo sac
egg cell differentiation" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009793 "embryo development
ending in seed dormancy" evidence=RCA] [GO:0009845 "seed
germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010074 "maintenance of meristem
identity" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0016567 "protein
ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AL022023 EMBL:AL161586 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
OMA:VLYDLVI ProtClustDB:CLSN2683757 EMBL:AF016848 IPI:IPI00525720
PIR:T05775 RefSeq:NP_195231.1 UniGene:At.2099
ProteinModelPortal:O22469 SMR:O22469 IntAct:O22469 STRING:O22469
PaxDb:O22469 PRIDE:O22469 EnsemblPlants:AT4G35050.1 GeneID:829657
KEGG:ath:AT4G35050 GeneFarm:2817 TAIR:At4g35050 InParanoid:O22469
PhylomeDB:O22469 Genevestigator:O22469 GermOnline:AT4G35050
Uniprot:O22469
Length = 424
Score = 675 (242.7 bits), Expect = 2.2e-66, P = 2.2e-66
Identities = 130/268 (48%), Positives = 175/268 (65%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSE 74
+ EE+ IWK+NTPFLYDL+I+H LEWPSLT+ W+P P KD ++V K+ILGTHTS
Sbjct: 15 VEEEFSIWKRNTPFLYDLMISHPLEWPSLTLHWVPSTPIPYSKDPYFAVHKLILGTHTSG 74
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
++LM+A V +P D+E D + KV+I Q+I DGEVNRAR M
Sbjct: 75 GAQDFLMVADVVIPTPDAEPGLGGRDQEP--------IVPKVEIKQKIRVDGEVNRARCM 126
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P L+ KT +EV++FDY++ KP C PDLRL GH EGYGL+WS FKEG+L
Sbjct: 127 PQKPTLVGAKTSGSEVFLFDYARLSGKPQTS-ECDPDLRLMGHEQEGYGLAWSSFKEGYL 185
Query: 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
LSGS D +ICLWD++A +K L M +++ H+ ++EDVAWH+++E +FGS GDD L+I
Sbjct: 186 LSGSQDQRICLWDVSATATDKVLNPMHVYEGHQSIIEDVAWHMKNENIFGSAGDDCQLVI 245
Query: 255 WDLRTPSVSKPVQSVVAHQSEVGVSILN 282
WDLRT + V+ H+ E+ N
Sbjct: 246 WDLRTNQMQHQVK---VHEREINYLSFN 270
Score = 122 (48.0 bits), Expect = 9.2e-05, P = 9.2e-05
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 117 QIIQQIN-HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175
Q+ Q+ H+ E+N + P N +++AT + + V +FD K + PL L
Sbjct: 252 QMQHQVKVHEREINYLSFNPFNEWVLATASSDSTVALFDLRKLTA--PLHV-------LS 302
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK---SLEAMQ-----IFKV-- 225
H E + + W E L S +D ++ +WDIN + L+A +F
Sbjct: 303 KHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRVGDEQLEIELDAEDGPPELLFSHGG 362
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
H+ + D AW+ ++ SV +D L +W +
Sbjct: 363 HKAKISDFAWNKDEPWVISSVAEDNSLQVWQM 394
>TAIR|locus:2059856 [details] [associations]
symbol:MSI2 "AT2G16780" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006260
"DNA replication" evidence=RCA] [GO:0006306 "DNA methylation"
evidence=RCA] [GO:0007067 "mitosis" evidence=RCA] [GO:0007129
"synapsis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0008283 "cell proliferation"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0051567 "histone H3-K9 methylation" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006351 GO:GO:0016568 EMBL:AC005825 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2683757 EMBL:AF016847 EMBL:AY056814 IPI:IPI00526379
PIR:B84544 RefSeq:NP_179269.1 UniGene:At.25135
ProteinModelPortal:O22468 SMR:O22468 STRING:O22468 PaxDb:O22468
PRIDE:O22468 EnsemblPlants:AT2G16780.1 GeneID:816179
KEGG:ath:AT2G16780 GeneFarm:2815 TAIR:At2g16780 InParanoid:O22468
OMA:EVNYLSF PhylomeDB:O22468 Genevestigator:O22468
GermOnline:AT2G16780 Uniprot:O22468
Length = 415
Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
Identities = 132/268 (49%), Positives = 174/268 (64%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKD--YSVQKMILGTHTSE 74
+ E++ +WKKNTPFLYDL+I+H LEWPSLTV W+P P D + V K+ILGTHTS
Sbjct: 14 VEEDFSVWKKNTPFLYDLLISHPLEWPSLTVHWVPSTPNPYVADSYFGVHKLILGTHTSG 73
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM 134
+ ++LM+A V P ++E + D F KV+I Q+I DGEVNRAR M
Sbjct: 74 SAQDFLMVADVVTPTPNAEPGIGGANQD--PF------IPKVEIRQRIRVDGEVNRARCM 125
Query: 135 PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194
PQ P L+ KT EV++FDY+KH +K C PDLRL GH EGYGLSWS FKEG+L
Sbjct: 126 PQKPTLVGAKTSGCEVFLFDYAKHAAKSQTS-ECDPDLRLVGHDKEGYGLSWSPFKEGYL 184
Query: 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254
LSGS D +ICLWD++A P++K L AM +++ HE + DV+WH+++E LFGS G+D L+I
Sbjct: 185 LSGSQDQKICLWDVSATPQDKVLNAMFVYEGHESAIADVSWHMKNENLFGSAGEDGRLVI 244
Query: 255 WDLRTPSVSKPVQSVVAHQSEVGVSILN 282
WD RT + V+ H+ EV N
Sbjct: 245 WDTRTNQMQHQVK---VHEREVNYLSFN 269
Score = 126 (49.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/152 (25%), Positives = 68/152 (44%)
Query: 117 QIIQQIN-HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175
Q+ Q+ H+ EVN + P N +++AT + + V +FD K PL S
Sbjct: 251 QMQHQVKVHEREVNYLSFNPFNEWVLATASSDSTVALFDLRK--LNAPLHVMSS------ 302
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK---SLEAMQ-----IFKV-- 225
H E + + W E L S +D ++ +WD+N + + L+A +F
Sbjct: 303 -HEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRVGEEQLEIELDAEDGPPELLFSHGG 361
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
H+ + D AW+ ++ SV +D L +W +
Sbjct: 362 HKAKISDFAWNKNEPWVIASVAEDNSLQVWQM 393
>WB|WBGene00004312 [details] [associations]
symbol:rba-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009790
"embryo development" evidence=IMP] [GO:0001703 "gastrulation with
mouth forming first" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0001708 GO:GO:0009792 GO:GO:0006915
GO:GO:0016246 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0040011 GO:GO:0006351
GO:GO:0016568 GO:GO:0040035 GO:GO:0045138
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0001703 HOGENOM:HOG000160330 EMBL:Z81097
OMA:MPDVTKT PIR:T23385 RefSeq:NP_492551.1 ProteinModelPortal:P90917
SMR:P90917 STRING:P90917 PaxDb:P90917 EnsemblMetazoa:K07A1.11.1
EnsemblMetazoa:K07A1.11.2 GeneID:172801 KEGG:cel:CELE_K07A1.11
UCSC:K07A1.11 CTD:172801 WormBase:K07A1.11 InParanoid:P90917
NextBio:877059 Uniprot:P90917
Length = 412
Score = 659 (237.0 bits), Expect = 1.1e-64, P = 1.1e-64
Identities = 126/267 (47%), Positives = 172/267 (64%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEP 77
++E++IWKKN P+LYD V+T +EWPSL+V+W+PD + D S+ +MI GTHT
Sbjct: 11 SKEHRIWKKNVPYLYDTVVTKEVEWPSLSVQWMPDVTKTENSDSSMHRMIHGTHTCGGVQ 70
Query: 78 NYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRARYMPQ 136
N+LM+++ + D E D +D +R +FGG+G + K +INH GEV+RARYMP
Sbjct: 71 NHLMISKFTITTDTPEFDDAKWDSEREEFGGYGEGSAAKWDTEIKINHPGEVHRARYMPH 130
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196
NPF+IA++ S +VY+FDY+KHPS+P D P LRL+GH EGYG+SWS +EGHLL+
Sbjct: 131 NPFIIASRGPSDDVYIFDYTKHPSEPK-DTKFRPQLRLKGHEGEGYGMSWSNTREGHLLT 189
Query: 197 GSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
DD IC WDINA + + FK H EDV++H H ++FGSVGDD+ L +W
Sbjct: 190 AGDDGMICHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249
Query: 256 DLRTPSVSKPVQSVVAHQSEVGVSILN 282
DLR SKP + V H +EV N
Sbjct: 250 DLRQ---SKPQLTAVGHTAEVNCITFN 273
>POMBASE|SPCC1672.10 [details] [associations]
symbol:mis16 "kinetochore protein Mis16" species:4896
"Schizosaccharomyces pombe" [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IMP] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0031055 "chromatin remodeling at centromere" evidence=IMP]
[GO:0031066 "regulation of histone deacetylation at centromere"
evidence=IMP] [GO:0031511 "Mis6-Sim4 complex" evidence=TAS]
[GO:0034501 "protein localization to kinetochore" evidence=IMP]
[GO:0051382 "kinetochore assembly" evidence=TAS] [GO:0070317
"negative regulation of G0 to G1 transition" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPCC1672.10 GO:GO:0005829 GO:GO:0070317 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0006281 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0000790 GO:GO:0000070
GO:GO:0000778 GO:GO:0034501 GO:GO:0006995 GO:GO:0051382
GO:GO:0016575 KO:K10752 InterPro:IPR022052 Pfam:PF12265 PIR:T41054
RefSeq:NP_587881.1 ProteinModelPortal:O94244 SMR:O94244
IntAct:O94244 STRING:O94244 PRIDE:O94244 EnsemblFungi:SPCC1672.10.1
GeneID:2539214 KEGG:spo:SPCC1672.10 HOGENOM:HOG000160330
OMA:NSCIIAT OrthoDB:EOG412QFD NextBio:20800384 GO:GO:0031511
GO:GO:0031055 GO:GO:0031066 Uniprot:O94244
Length = 430
Score = 581 (209.6 bits), Expect = 2.0e-56, P = 2.0e-56
Identities = 119/274 (43%), Positives = 164/274 (59%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+ I EEYK+WK+N PFLYDLVITHALEWPSLT++WLPD++ PG DYS+Q++ILGTHTS
Sbjct: 24 KTIQEEYKLWKQNVPFLYDLVITHALEWPSLTIQWLPDKKTIPGTDYSIQRLILGTHTSG 83
Query: 75 NEPNYLMLAQVQLP-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
N+ NYL +A VQLP D+ + R+ G + ++I Q+I HDG+VNRARY
Sbjct: 84 NDQNYLQIASVQLPNFDEDTTEFTPSTIRRAQATG----SYTIEISQKIPHDGDVNRARY 139
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
MPQ P +IAT Y+FD + H + G P L+GH+ EG+GL W+ G+
Sbjct: 140 MPQKPEIIATMGEGGNAYIFDTTCHDALTT--GEALPQAVLKGHTAEGFGLCWNPNLPGN 197
Query: 194 LLSGSDDAQICLWDINA----APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
L +G++D ICLWD+ + + K + + + H +V DV +H +HE L SV DD
Sbjct: 198 LATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFHPQHEALLASVSDD 257
Query: 250 QYLLIWDLR-TPSVSKPVQSVVAHQSEVGVSILN 282
L I D R P P + + AH + +N
Sbjct: 258 CTLQIHDTRLNPEEEAP-KVIQAHSKAINAVAIN 290
Score = 143 (55.4 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 41/147 (27%), Positives = 69/147 (46%)
Query: 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176
++IQ H +N P N +L+AT + V ++D ++P + L L G
Sbjct: 275 KVIQA--HSKAINAVAINPFNDYLLATASADKTVALWDL-RNPYQR-LH-------TLEG 323
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE-----AMQIFKVHEGV-- 229
H E YGL WS E L S S D ++C+WD+ + ++ E + ++ +H G
Sbjct: 324 HEDEVYGLEWSPHDEPILASSSTDRRVCIWDLEKIGEEQTPEDAEDGSPELLFMHGGHTN 383
Query: 230 -VEDVAWHLRHEYLFGSVGDDQYLLIW 255
+ + +W ++ GS+ DD L IW
Sbjct: 384 RISEFSWCPNERWVVGSLADDNILQIW 410
>ASPGD|ASPL0000017699 [details] [associations]
symbol:AN8187 species:162425 "Emericella nidulans"
[GO:0000778 "condensed nuclear chromosome kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IEA] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IEA] [GO:0034501 "protein localization to
kinetochore" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0070317 "negative regulation of G0 to
G1 transition" evidence=IEA] [GO:0016575 "histone deacetylation"
evidence=IEA] [GO:0031066 "regulation of histone deacetylation at
centromere" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 EMBL:BN001302 OMA:CQPDLRL InterPro:IPR022052
Pfam:PF12265 EnsemblFungi:CADANIAT00004230 Uniprot:C8V748
Length = 411
Score = 429 (156.1 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 86/191 (45%), Positives = 121/191 (63%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
++INEEYK WKKN PFLYD++++ ALEWP+LT +WLPD+++ K YS +++LGTHTS
Sbjct: 23 KIINEEYKTWKKNAPFLYDMILSTALEWPTLTTQWLPDKQDASDKPYSTHRLLLGTHTSS 82
Query: 75 NEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKV------QIIQQINHDGEV 128
+ NYL +AQVQLP ++ N YD++R + GG+G ++ K +I+Q+I+H GEV
Sbjct: 83 DAQNYLQIAQVQLPNPNAPNPD-DYDEERGEIGGYGGSSKKAPMEINFKIVQKIDHKGEV 141
Query: 129 NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK 188
N+AR M ++D SKH S P G +P + L GH EG+GLSWS
Sbjct: 142 NKARVM-----------------IWDRSKHQSVPT--GTVNPQMELLGHKQEGFGLSWSP 182
Query: 189 FKEGHLLSGSD 199
GHL +G D
Sbjct: 183 HVAGHLATGRD 193
Score = 189 (71.6 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 46/136 (33%), Positives = 66/136 (48%)
Query: 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207
A V ++D SKH S P G +P + L GH EG+GLSWS GHL +G D + +
Sbjct: 144 ARVMIWDRSKHQSVPT--GTVNPQMELLGHKQEGFGLSWSPHVAGHLATGRD---LTTYT 198
Query: 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267
N NK+L+ ++ + H +V DV H H L G+V DD L I D R ++
Sbjct: 199 KN----NKALQPVRTYTHHSSIVNDVQHHPLHSSLIGTVSDDITLQILDTRVAETTRAAA 254
Query: 268 SVVA-HQSEVGVSILN 282
+ H+ + N
Sbjct: 255 TAEGQHRDAINAIAFN 270
Score = 118 (46.6 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 29/110 (26%), Positives = 51/110 (46%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-----IFKVHEG 228
L H+ +SW F+E L S S D +I WD++ A + ++ E Q + +H G
Sbjct: 301 LENHTDSVTSISWHPFEEAVLASASYDRKIMFWDLSRAGEEQTPEDAQDGPPELLFMHGG 360
Query: 229 V---VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
+ D +W+L ++ S +D L +W + V K ++ V + E
Sbjct: 361 HTNRISDFSWNLNDPWVLCSAAEDNLLQVWKVADAIVGKDMEDVPTEELE 410
Score = 84 (34.6 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 23/75 (30%), Positives = 36/75 (48%)
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
++++ E L +GS D I LWD+ N K +LE H V ++WH E +
Sbjct: 267 IAFNPAAETVLATGSADKTIGLWDLRNLKTKLHTLEN------HTDSVTSISWHPFEEAV 320
Query: 243 FGSVGDDQYLLIWDL 257
S D+ ++ WDL
Sbjct: 321 LASASYDRKIMFWDL 335
Score = 49 (22.3 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 13/61 (21%), Positives = 27/61 (44%)
Query: 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
SDD + + D A ++ + H + +A++ E + + D+ + +WDL
Sbjct: 234 SDDITLQILDTRVAETTRAAATAE--GQHRDAINAIAFNPAAETVLATGSADKTIGLWDL 291
Query: 258 R 258
R
Sbjct: 292 R 292
>POMBASE|SPAC25H1.06 [details] [associations]
symbol:pcf3 "CAF assembly factor (CAF-1) complex subunit
C, Pcf3" species:4896 "Schizosaccharomyces pombe" [GO:0000790
"nuclear chromatin" evidence=IC] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006335 "DNA replication-dependent nucleosome assembly"
evidence=IC] [GO:0033186 "CAF-1 complex" evidence=IDA] [GO:0035067
"negative regulation of histone acetylation" evidence=IMP]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0051574
"positive regulation of histone H3-K9 methylation" evidence=IMP]
[GO:0070829 "heterochromatin maintenance" evidence=IMP] [GO:0090053
"positive regulation of chromatin silencing at centromere"
evidence=IMP] [GO:0090055 "positive regulation of chromatin
silencing at silent mating-type cassette" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC25H1.06 GO:GO:0005829 EMBL:CU329670 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 GO:GO:0000790
GO:GO:0043596 GO:GO:0006335 GO:GO:0035067 GO:GO:0051574
GO:GO:0033186 KO:K10752 InterPro:IPR022052 Pfam:PF12265
GO:GO:0090055 HOGENOM:HOG000160330 OrthoDB:EOG44TSHP GO:GO:0070829
GO:GO:0090053 PIR:T38386 RefSeq:NP_593810.1
ProteinModelPortal:Q9Y825 STRING:Q9Y825 EnsemblFungi:SPAC25H1.06.1
GeneID:2541656 KEGG:spo:SPAC25H1.06 OMA:MESITEK NextBio:20802749
Uniprot:Q9Y825
Length = 408
Score = 452 (164.2 bits), Expect = 9.3e-43, P = 9.3e-43
Identities = 95/258 (36%), Positives = 154/258 (59%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I+E++ WKKN+ LY+L+IT L WPSL+++WL E K +++LGTH +E
Sbjct: 20 ISEDHFRWKKNSKHLYNLLITRTLTWPSLSIQWLSAMESITEKAVLKNRLLLGTHAAEGM 79
Query: 77 PNYLMLAQVQLPLDDSE---NDARHYDDDRSDFGGFGCANG-KVQIIQQINHDGEVNRAR 132
PN+L LA + LP D ++ + +HY++D + GG+ + K QI Q+I H+G+VNR R
Sbjct: 80 PNFLQLADLDLP-DFNQTILDPVKHYNEDTGELGGYSMQHSCKFQISQRILHNGDVNRVR 138
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192
+MPQNP +IAT + Y+FD +K+ S P + P++ L GH EG+GLSW++ +
Sbjct: 139 HMPQNPNIIATMSSCGNAYIFDRTKYTSMPAEEFL--PNISLIGHKKEGFGLSWNRQQNC 196
Query: 193 HLLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY 251
L++ ++D++I WD+N ++ + L ++ F + V DV +H H L+ +V D+
Sbjct: 197 RLVTAANDSKILEWDLNNFSRDTRCLTPVKDFHYDDSPVNDVEYHPHHTNLYIAVNDNGI 256
Query: 252 LLIWDLRTPSV-SKPVQS 268
I D R SK V++
Sbjct: 257 AFICDNRLQQTCSKTVKA 274
>POMBASE|SPAC29A4.18 [details] [associations]
symbol:prw1 "Clr6 histone deacetylase complex subunit
Prw1" species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=IC] [GO:0006342 "chromatin silencing"
evidence=ISO] [GO:0016575 "histone deacetylation" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IMP] [GO:0032221
"Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L complex"
evidence=IDA] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
PomBase:SPAC29A4.18 GO:GO:0005829 EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 GO:GO:0006338
GO:GO:0000070 GO:GO:0006342 GO:GO:0030261 GO:GO:0033698
GO:GO:0070210 GO:GO:0016575 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0032221 HOGENOM:HOG000160330 PIR:T38471
RefSeq:NP_594864.1 ProteinModelPortal:O14021 DIP:DIP-29342N
IntAct:O14021 STRING:O14021 EnsemblFungi:SPAC29A4.18.1
GeneID:2541804 KEGG:spo:SPAC29A4.18 OMA:HISSHEK OrthoDB:EOG4MWCH4
NextBio:20802892 Uniprot:O14021
Length = 431
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 96/268 (35%), Positives = 139/268 (51%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+ INEEYKIWKKN+PFLYDL+IT ALEWP ++++W P+++ Y+ QKM LG
Sbjct: 24 KCINEEYKIWKKNSPFLYDLIITRALEWPCMSLQWYPEQQIFAEHGYTEQKMFLGVRADV 83
Query: 75 NEPNYLM-LAQVQLP-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRAR 132
+ YL+ +A +QLP L+ + D +V I +H V A+
Sbjct: 84 GK--YLLAVASIQLPYLNQTVPPTTMEGASAGDESSL-----RVNISNLYSHPESVCSAK 136
Query: 133 YMPQNPFLIATK-TVSAEVYVFDYSKHPS-KPPLDGACSPDLRLRGHSTEGYGLSWSKFK 190
MPQ+ +AT +V VFD S + P RL H+ + W+
Sbjct: 137 LMPQDDSCVATVGNYHNDVLVFDKESFESYSSASESPLKPKYRLTKHTQPCTSVCWNFLS 196
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDD 249
+G L+SGS DA + WD+NA ++ S +++ HE V DV +H +H+ L SV D
Sbjct: 197 KGTLVSGSQDATLSCWDLNAYNESDSASVLKVHISSHEKQVSDVRFHYKHQDLLASVSYD 256
Query: 250 QYLLIWDLRTPSVS-KPVQSVVAHQSEV 276
QYL + D+R P S KP +SV AH +
Sbjct: 257 QYLHVHDIRRPDASTKPARSVHAHSGPI 284
>GENEDB_PFALCIPARUM|PF13_0149 [details] [associations]
symbol:PF13_0149 "chromatin assembly factor 1
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0006333
"chromatin assembly or disassembly" evidence=ISS] [GO:0051082
"unfolded protein binding" evidence=ISS] [GO:0042393 "histone
binding" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 327 (120.2 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 65/175 (37%), Positives = 97/175 (55%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGK-DYSVQKMILGTHTSENE 76
NE + IW+KNTPFLY ++ H L+WPSLTVE+L K +Y K++LGTHTS +
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRAR 132
Y+ + +++ P+ + D Y++ G ++ ++ H GEV RA
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 187
+P N F I T+T + +FDY+KHPS P C P + L+GH+ EG GL W+
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 68 (29.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 172 LRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
L+L+ H T+G + + G S SDD C+WDI+ +N + + + + K + +
Sbjct: 472 LKLKYH-TQGINRIKFGMISSGIFASCSDDGTACIWDIS---RNNNTQILPLQKTEDDI 526
Score = 68 (29.0 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 185 SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
S+ F E G D I +WD+ NK E++ K H + + + + +F
Sbjct: 441 SFDNFSEYIFSCGYSDGLISVWDMRY---NK--ESLLKLKYHTQGINRIKFGMISSGIFA 495
Query: 245 SVGDDQYLLIWDL 257
S DD IWD+
Sbjct: 496 SCSDDGTACIWDI 508
Score = 60 (26.2 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSL 217
L S S D ICLWDIN K+ +
Sbjct: 326 LASCSVDGSICLWDINKGTKSNDV 349
Score = 57 (25.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
DI P + + + H G + D+AW + + +VG D + +W L
Sbjct: 525 DIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 49 (22.3 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D+ + ++DI KN +A F + + ++ EY+F D + +WD+R
Sbjct: 408 DNGYMSIYDIRK--KNFFTKAEICFNDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDMR 465
Score = 44 (20.5 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D+ +H + G D+ Y+ I+D+R
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIR 418
Score = 41 (19.5 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209
GH Y L+W+ + + D I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 228 GVVEDV-AWHLRHEYLF 243
GV + WHL ++LF
Sbjct: 565 GVDNSIHVWHLNEQFLF 581
>UNIPROTKB|Q8IE52 [details] [associations]
symbol:PF13_0149 "Chromatin assembly factor 1 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0003682
"chromatin binding" evidence=ISS] [GO:0006333 "chromatin assembly
or disassembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 GO:GO:0003682 GO:GO:0006333
GO:GO:0042393 GO:GO:0005678 EMBL:AL844509 KO:K10752
InterPro:IPR022052 Pfam:PF12265 OMA:EVNYLSF RefSeq:XP_001350006.1
ProteinModelPortal:Q8IE52 EnsemblProtists:PF13_0149:mRNA
GeneID:814119 KEGG:pfa:PF13_0149 EuPathDB:PlasmoDB:PF3D7_1329300
HOGENOM:HOG000283238 ProtClustDB:CLSZ2500737 Uniprot:Q8IE52
Length = 582
Score = 327 (120.2 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 65/175 (37%), Positives = 97/175 (55%)
Query: 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGK-DYSVQKMILGTHTSENE 76
NE + IW+KNTPFLY ++ H L+WPSLTVE+L K +Y K++LGTHTS +
Sbjct: 38 NERHIIWRKNTPFLYSSLLKHKLDWPSLTVEFLGGDNSFKSKLNYFTNKVLLGTHTSNQD 97
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG----KVQIIQQINHDGEVNRAR 132
Y+ + +++ P+ + D Y++ G ++ ++ H GEV RA
Sbjct: 98 LEYVYIGEIKCPIFSIKEDVLQYENYSGFISNKKKKKGHPLPSFEVKAKLLHPGEVIRAT 157
Query: 133 YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 187
+P N F I T+T + +FDY+KHPS P C P + L+GH+ EG GL W+
Sbjct: 158 NLPSNSFFIVTQTSNGNALLFDYTKHPSFPSDMSTCYPQMILKGHTNEGSGLCWN 212
Score = 68 (29.0 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 16/59 (27%), Positives = 30/59 (50%)
Query: 172 LRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
L+L+ H T+G + + G S SDD C+WDI+ +N + + + + K + +
Sbjct: 472 LKLKYH-TQGINRIKFGMISSGIFASCSDDGTACIWDIS---RNNNTQILPLQKTEDDI 526
Score = 68 (29.0 bits), Expect = 8.3e-34, Sum P(2) = 8.3e-34
Identities = 20/73 (27%), Positives = 31/73 (42%)
Query: 185 SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244
S+ F E G D I +WD+ NK E++ K H + + + + +F
Sbjct: 441 SFDNFSEYIFSCGYSDGLISVWDMRY---NK--ESLLKLKYHTQGINRIKFGMISSGIFA 495
Query: 245 SVGDDQYLLIWDL 257
S DD IWD+
Sbjct: 496 SCSDDGTACIWDI 508
Score = 60 (26.2 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSL 217
L S S D ICLWDIN K+ +
Sbjct: 326 LASCSVDGSICLWDINKGTKSNDV 349
Score = 57 (25.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
DI P + + + H G + D+AW + + +VG D + +W L
Sbjct: 525 DIYNNPNPVPKQLLFVHGGHIGSIYDLAWANSNTFTIATVGVDNSIHVWHL 575
Score = 49 (22.3 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D+ + ++DI KN +A F + + ++ EY+F D + +WD+R
Sbjct: 408 DNGYMSIYDIRK--KNFFTKAEICFNDYNEPMNTFSFDNFSEYIFSCGYSDGLISVWDMR 465
Score = 44 (20.5 bits), Expect = 6.5e-36, Sum P(3) = 6.5e-36
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLR 258
D+ +H + G D+ Y+ I+D+R
Sbjct: 392 DIFFHPKFSNALGVCDDNGYMSIYDIR 418
Score = 41 (19.5 bits), Expect = 5.6e-31, Sum P(2) = 5.6e-31
Identities = 9/34 (26%), Positives = 15/34 (44%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209
GH Y L+W+ + + D I +W +N
Sbjct: 543 GHIGSIYDLAWANSNTFTIATVGVDNSIHVWHLN 576
Score = 39 (18.8 bits), Expect = 3.2e-36, Sum P(3) = 3.2e-36
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 228 GVVEDV-AWHLRHEYLF 243
GV + WHL ++LF
Sbjct: 565 GVDNSIHVWHLNEQFLF 581
>SGD|S000000782 [details] [associations]
symbol:HAT2 "Subunit of the Hat1p-Hat2p histone
acetyltransferase complex" species:4932 "Saccharomyces cerevisiae"
[GO:0042393 "histone binding" evidence=IDA] [GO:0000123 "histone
acetyltransferase complex" evidence=IDA;IPI] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006333 "chromatin assembly or disassembly"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0004402
"histone acetyltransferase activity" evidence=IDA;IMP;IPI]
[GO:0016573 "histone acetylation" evidence=IDA;IMP] [GO:0006348
"chromatin silencing at telomere" evidence=IGI] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 SGD:S000000782 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016573 EMBL:BK006939 GO:GO:0006333
GO:GO:0006348 EMBL:U18795 GO:GO:0042393
GeneTree:ENSGT00570000079069 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0000123 HOGENOM:HOG000160330 OrthoDB:EOG412QFD
PIR:S50533 RefSeq:NP_010858.3 RefSeq:NP_010861.3
ProteinModelPortal:P39984 SMR:P39984 DIP:DIP-2363N IntAct:P39984
MINT:MINT-654148 STRING:P39984 PaxDb:P39984 PeptideAtlas:P39984
EnsemblFungi:YEL056W GeneID:856654 GeneID:856657 KEGG:sce:YEL053C
KEGG:sce:YEL056W CYGD:YEL056w OMA:VLYDLVI NextBio:982637
Genevestigator:P39984 GermOnline:YEL056W Uniprot:P39984
Length = 401
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 85/243 (34%), Positives = 129/243 (53%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
++EEY +WK N P +YD V L WPSLTV+WLP + + Q++I+GTHTS E
Sbjct: 10 VDEEYDLWKSNVPLMYDFVSETRLTWPSLTVQWLPTPVQELDGGFIKQELIIGTHTSGEE 69
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ 136
NYL A++ LP + N+ + ++I + H+ E+ RARYMPQ
Sbjct: 70 ENYLKFAEINLPKEILSNEDPQEEAGEEYQSSLPAPRSNIRITAKYEHEEEITRARYMPQ 129
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196
+P ++AT ++ + VF YS+ +G S L+ H GY LS+S +G LLS
Sbjct: 130 DPNIVAT--INGQGTVFLYSRS------EGLQST---LKFHKDNGYALSFSTLVKGRLLS 178
Query: 197 GSDDAQICLWDINAA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
GSDD + LW++ + K + +H ++ D WH ++ LFG+V +D L I
Sbjct: 179 GSDDHTVALWEVGSGGDPTKPVRTWN--DLHSDIINDNKWHNFNKDLFGTVSEDSLLKIN 236
Query: 256 DLR 258
D+R
Sbjct: 237 DVR 239
>GENEDB_PFALCIPARUM|PFA0520c [details] [associations]
symbol:PFA0520c "chromatin assembly factor 1
protein WD40 domain, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 81/270 (30%), Positives = 142/270 (52%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ ++ WK N+ LYD V LEWPSL+V++ E + Q + +GTHTS E
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG-CANGKVQIIQ-QINHDGEVNRARYM 134
PN+L + V PL+ + Y + + + GF C+ K I+ +I H GEVNR +++
Sbjct: 103 PNFLYVCDVLFPLEQVPQEKCIYKSNEN-YEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 135 P-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
P + + TK V V++FD +KH + +D +P++ G+ ++G+GL + K+ +
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQPIKK-Y 219
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L+ ++D I ++D N K+++ +KV ++ V D++ L + D+ Y+
Sbjct: 220 ILTCANDGLINVYDYNTL-NTKTVQPF--YKVQYKSPVNDIS-PTNDPNLILACADNGYI 275
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
LI+D R S ++P Q + Q V LN
Sbjct: 276 LIFDFRIKS-NEPAQQTLGQQVPVNTVALN 304
>UNIPROTKB|Q8I238 [details] [associations]
symbol:PFA_0520c "Chromatin assembly factor 1 protein WD40
domain, putative" species:36329 "Plasmodium falciparum 3D7"
[GO:0006334 "nucleosome assembly" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0051082 "unfolded protein
binding" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0051082
GO:GO:0042393 GO:GO:0006334 GO:GO:0005678 KO:K10752
InterPro:IPR022052 Pfam:PF12265 EMBL:AL844501 OMA:VLYDLVI
RefSeq:XP_001351036.1 ProteinModelPortal:Q8I238 PRIDE:Q8I238
EnsemblProtists:PFA0520c:mRNA GeneID:813241 KEGG:pfa:PFA_0520c
HOGENOM:HOG000283790 ProtClustDB:CLSZ2433094 Uniprot:Q8I238
Length = 446
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 81/270 (30%), Positives = 142/270 (52%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ ++ WK N+ LYD V LEWPSL+V++ E + Q + +GTHTS E
Sbjct: 43 VETQFNNWKTNSGLLYDFVCRKELEWPSLSVDFGDFHHENLENNVLNQIVCVGTHTSNKE 102
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFG-CANGKVQIIQ-QINHDGEVNRARYM 134
PN+L + V PL+ + Y + + + GF C+ K I+ +I H GEVNR +++
Sbjct: 103 PNFLYVCDVLFPLEQVPQEKCIYKSNEN-YEGFDFCSEKKKFTIKSKIAHTGEVNRIKFV 161
Query: 135 P-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193
P + + TK V V++FD +KH + +D +P++ G+ ++G+GL + K+ +
Sbjct: 162 PLEKKNFVVTKAVDGNVHLFDINKHKIET-VDDKMNPEVSFVGNQSDGFGLDFQPIKK-Y 219
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYL 252
+L+ ++D I ++D N K+++ +KV ++ V D++ L + D+ Y+
Sbjct: 220 ILTCANDGLINVYDYNTL-NTKTVQPF--YKVQYKSPVNDIS-PTNDPNLILACADNGYI 275
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
LI+D R S ++P Q + Q V LN
Sbjct: 276 LIFDFRIKS-NEPAQQTLGQQVPVNTVALN 304
>GENEDB_PFALCIPARUM|PF14_0314 [details] [associations]
symbol:PF14_0314 "chromatin assembly factor 1
p55 subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0051082 "unfolded protein binding" evidence=ISS] [GO:0042393
"histone binding" evidence=ISS] [GO:0006334 "nucleosome assembly"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/261 (28%), Positives = 141/261 (54%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78
+ YK W+ NT LY++++ + EWPSL +EWLP + ++Y+ Q +ILGT+T+E N
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP-KVYKNDEEYAYQDLILGTYTTEKN-N 87
Query: 79 YLMLAQVQLPLDDSENDARHYD---DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMP 135
Y+++ +V LP ++ + +Y+ D R +F N +++ +I H+ E+N+ P
Sbjct: 88 YILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIK--NKIYHESEINKISCYP 145
Query: 136 QNPFLIATKTVSAEVYVF---DYSKHPSKPPL--DGACSPDLRLRGHSTEGYGLSWSKFK 190
+N ++A + +F DY + + D + D L+GH +G+GL W K
Sbjct: 146 ENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDD-K 204
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
++ S DD+ +C+WD+N + +K + + + H ++D W+ + L SV ++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTS--DKIMHPIVKYFNHNIPLQDCCWN-DNNVL--SVSENG 259
Query: 251 YLLIWDLRTPSVSKPVQSVVA 271
++ I+D+R +V V S+ A
Sbjct: 260 HINIYDIRNKTV---VNSICA 277
>UNIPROTKB|Q8ILD0 [details] [associations]
symbol:PF14_0314 "Chromatin assembly factor 1 P55 subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006334
"nucleosome assembly" evidence=ISS] [GO:0042393 "histone binding"
evidence=ISS] [GO:0051082 "unfolded protein binding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0051082 EMBL:AE014187 GO:GO:0042393
GO:GO:0006334 GO:GO:0005678 KO:K10752 InterPro:IPR022052
Pfam:PF12265 RefSeq:XP_001348488.2 ProteinModelPortal:Q8ILD0
EnsemblProtists:PF14_0314:mRNA GeneID:811896 KEGG:pfa:PF14_0314
EuPathDB:PlasmoDB:PF3D7_1433300 HOGENOM:HOG000281237 Uniprot:Q8ILD0
Length = 428
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 75/261 (28%), Positives = 141/261 (54%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPN 78
+ YK W+ NT LY++++ + EWPSL +EWLP + ++Y+ Q +ILGT+T+E N
Sbjct: 30 DNYKYWQYNTILLYNVIMIYTCEWPSLFIEWLP-KVYKNDEEYAYQDLILGTYTTEKN-N 87
Query: 79 YLMLAQVQLPLDDSENDARHYD---DDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMP 135
Y+++ +V LP ++ + +Y+ D R +F N +++ +I H+ E+N+ P
Sbjct: 88 YILILEVTLPSEEFSYSSFYYEKINDYRHNFCNDTSKNFRIK--NKIYHESEINKISCYP 145
Query: 136 QNPFLIATKTVSAEVYVF---DYSKHPSKPPL--DGACSPDLRLRGHSTEGYGLSWSKFK 190
+N ++A + +F DY + + D + D L+GH +G+GL W K
Sbjct: 146 ENADIVACFCSDGNINIFNINDYYNKDDEDEIKNDNILTFDKTLKGHLYQGWGLEWDD-K 204
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
++ S DD+ +C+WD+N + +K + + + H ++D W+ + L SV ++
Sbjct: 205 NNYISSCGDDSYLCIWDMNTS--DKIMHPIVKYFNHNIPLQDCCWN-DNNVL--SVSENG 259
Query: 251 YLLIWDLRTPSVSKPVQSVVA 271
++ I+D+R +V V S+ A
Sbjct: 260 HINIYDIRNKTV---VNSICA 277
>TAIR|locus:2050372 [details] [associations]
symbol:FVE species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009826 "unidimensional
cell growth" evidence=IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0009965 "leaf morphogenesis" evidence=IMP]
[GO:0010090 "trichome morphogenesis" evidence=IMP] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IMP] [GO:0010224 "response to UV-B" evidence=IEP]
[GO:0046872 "metal ion binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0030154
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005730 GO:GO:0006355
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0046872
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AC005917 GO:GO:0009908 GO:GO:0010224 KO:K10752
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
EMBL:AF498101 EMBL:AF498102 EMBL:AY849994 EMBL:AY059799
EMBL:AY057655 EMBL:AY081447 EMBL:AF028711 EMBL:Z37286 EMBL:Z37287
IPI:IPI00539247 PIR:G84577 RefSeq:NP_565456.2 UniGene:At.20032
ProteinModelPortal:O22607 SMR:O22607 DIP:DIP-59614N STRING:O22607
PaxDb:O22607 PRIDE:O22607 EnsemblPlants:AT2G19520.1 GeneID:816471
KEGG:ath:AT2G19520 GeneFarm:2818 TAIR:At2g19520 InParanoid:O22607
OMA:CIRELEQ PhylomeDB:O22607 ProtClustDB:CLSN2918036
Genevestigator:O22607 GermOnline:AT2G19520 Uniprot:O22607
Length = 507
Score = 249 (92.7 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 66/198 (33%), Positives = 103/198 (52%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
++E+Y WK P LYD + H L WPSL+ W P E+ K+ Q++ L T +
Sbjct: 64 VDEKYSQWKGLVPILYDWLANHNLVWPSLSCRWGPQLEQATYKNR--QRLYLSEQTDGSV 121
Query: 77 PNYLMLAQVQL--P-LDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
PN L++A ++ P + +E+ ++ ++ RS F V+ + I H GEVNR R
Sbjct: 122 PNTLVIANCEVVKPRVAAAEHISQFNEEARSPF---------VKKYKTIIHPGEVNRIRE 172
Query: 134 MPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS--PDLRLRGHSTEG-YGLSWSKFK 190
+PQN ++AT T S +V ++D P++ + GA + PDL L GH + L+
Sbjct: 173 LPQNSKIVATHTDSPDVLIWDVETQPNRHAVLGAANSRPDLILTGHQDNAEFALAMCP-T 231
Query: 191 EGHLLSGSDDAQICLWDI 208
E +LSG D + LW I
Sbjct: 232 EPFVLSGGKDKSVVLWSI 249
Score = 95 (38.5 bits), Expect = 2.7e-28, Sum P(2) = 2.7e-28
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEV 276
++ HE VEDVA+ F SVGDD L++WD RT + PV V AH +++
Sbjct: 287 VYHGHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGT--NPVTKVEKAHDADL 340
>CGD|CAL0005349 [details] [associations]
symbol:HAT2 species:5476 "Candida albicans" [GO:0000123
"histone acetyltransferase complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA;IDA] [GO:0004402 "histone acetyltransferase activity"
evidence=IEA;IDA] [GO:0016573 "histone acetylation"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:2000221
"negative regulation of pseudohyphal growth" evidence=IMP]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:0006333 "chromatin assembly or disassembly"
evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0006281 eggNOG:COG2319 GO:GO:0016568
KO:K10752 InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000162
EMBL:AACQ01000158 RefSeq:XP_712278.1 RefSeq:XP_712421.1
ProteinModelPortal:Q59RH5 STRING:Q59RH5 GeneID:3645973
GeneID:3646093 KEGG:cal:CaO19.2146 KEGG:cal:CaO19.9693
Uniprot:Q59RH5
Length = 382
Score = 191 (72.3 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 48/151 (31%), Positives = 80/151 (52%)
Query: 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171
AN K++ +Q++ ++ E+ RARYMPQ+ ++AT EV +++ +P
Sbjct: 87 ANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYSHF----AP- 141
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
H+ GYGLSW+ ++G L++G+DD +C+ D NK+ I K +V
Sbjct: 142 -----HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDIQK---DIVN 190
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262
DV WH + LF SV +D ++ ++D R V
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARDNKV 221
Score = 170 (64.9 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I EEY++W+KN ++Y+ V AL WPSLT++WLP+ G + K++LGTHTS
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 77 PNYLMLAQVQLPLD 90
N L +A QL D
Sbjct: 69 ANQLKVASTQLSAD 82
Score = 120 (47.3 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 109 FGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGAC 168
F + KV +N + P L+A S+ + + D K L
Sbjct: 214 FDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSGLLHT- 272
Query: 169 SPDLRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE-----AMQI 222
+ GHS EG + +S +G L +GS D +I +WD+ + + E ++
Sbjct: 273 -----MMGHS-EGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPEL 326
Query: 223 FKVHEGV---VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVS 279
F +H G V D++W +++ GSV DD + +W+ +SK + + ++EV VS
Sbjct: 327 FMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWE-----ISKKL--ITNEEAEVDVS 379
Query: 280 IL 281
IL
Sbjct: 380 IL 381
>UNIPROTKB|Q59RH5 [details] [associations]
symbol:HAT2 "Histone acetyltransferase type B subunit 2"
species:237561 "Candida albicans SC5314" [GO:0005634 "nucleus"
evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] [GO:0016573 "histone acetylation" evidence=IDA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IMP] [GO:2000221 "negative regulation of pseudohyphal
growth" evidence=IMP] [GO:0004402 "histone acetyltransferase
activity" evidence=IDA] [GO:0042393 "histone binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005349 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006281
eggNOG:COG2319 GO:GO:0016568 KO:K10752 InterPro:IPR022052
Pfam:PF12265 EMBL:AACQ01000162 EMBL:AACQ01000158 RefSeq:XP_712278.1
RefSeq:XP_712421.1 ProteinModelPortal:Q59RH5 STRING:Q59RH5
GeneID:3645973 GeneID:3646093 KEGG:cal:CaO19.2146
KEGG:cal:CaO19.9693 Uniprot:Q59RH5
Length = 382
Score = 191 (72.3 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 48/151 (31%), Positives = 80/151 (52%)
Query: 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171
AN K++ +Q++ ++ E+ RARYMPQ+ ++AT EV +++ +P
Sbjct: 87 ANSKIKTVQKLENNAEICRARYMPQDANIVATINGLGEVDLYNLDTETRYSHF----AP- 141
Query: 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVE 231
H+ GYGLSW+ ++G L++G+DD +C+ D NK+ I K +V
Sbjct: 142 -----HTKNGYGLSWNPKQKGLLVTGADDNFVCVTDTTT---NKTTFKSDIQK---DIVN 190
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262
DV WH + LF SV +D ++ ++D R V
Sbjct: 191 DVKWHQFNGNLFASVSEDSHVYLFDARDNKV 221
Score = 170 (64.9 bits), Expect = 4.3e-27, Sum P(2) = 4.3e-27
Identities = 33/74 (44%), Positives = 46/74 (62%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
I EEY++W+KN ++Y+ V AL WPSLT++WLP+ G + K++LGTHTS
Sbjct: 11 IKEEYQLWRKNCRYMYEFVSETALMWPSLTIQWLPNYTTTNGLIDA--KLLLGTHTSNQS 68
Query: 77 PNYLMLAQVQLPLD 90
N L +A QL D
Sbjct: 69 ANQLKVASTQLSAD 82
Score = 120 (47.3 bits), Expect = 4.4e-19, Sum P(2) = 4.4e-19
Identities = 46/182 (25%), Positives = 79/182 (43%)
Query: 109 FGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGAC 168
F + KV +N + P L+A S+ + + D K L
Sbjct: 214 FDARDNKVVSQYYAESSNGINSLAFSPFAENLVAIGNTSSNINLLDLRKLGENSGLLHT- 272
Query: 169 SPDLRLRGHSTEGYG-LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE-----AMQI 222
+ GHS EG + +S +G L +GS D +I +WD+ + + E ++
Sbjct: 273 -----MMGHS-EGITCMEFSPHHDGILATGSQDRRIIIWDLFKVGEEQQQEDAEDGCPEL 326
Query: 223 FKVHEGV---VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVS 279
F +H G V D++W +++ GSV DD + +W+ +SK + + ++EV VS
Sbjct: 327 FMMHAGHTAGVSDLSWCPFKDWMIGSVADDNIVHLWE-----ISKKL--ITNEEAEVDVS 379
Query: 280 IL 281
IL
Sbjct: 380 IL 381
>UNIPROTKB|C9JPP3 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000160330 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 IPI:IPI00974561 ProteinModelPortal:C9JPP3 SMR:C9JPP3
STRING:C9JPP3 Ensembl:ENST00000445722 ArrayExpress:C9JPP3
Bgee:C9JPP3 Uniprot:C9JPP3
Length = 87
Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
Identities = 50/88 (56%), Positives = 70/88 (79%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDRSDFGGFGCANGKVQIIQQIN 123
A HYD ++ +FGGFG +GK++I +IN
Sbjct: 60 ASHYDSEKGEFGGFGSVSGKIEIEIKIN 87
>DICTYBASE|DDB_G0291566 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat-containing
protein 1" species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291566 EMBL:AAFI02000177 GenomeReviews:CM000155_GR
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052
Pfam:PF12265 KO:K14848 OMA:NRLMMLR RefSeq:XP_635306.1
ProteinModelPortal:Q54ED4 STRING:Q54ED4 EnsemblProtists:DDB0267050
GeneID:8628250 KEGG:ddi:DDB_G0291566 ProtClustDB:CLSZ2732316
Uniprot:Q54ED4
Length = 482
Score = 256 (95.2 bits), Expect = 2.2e-21, P = 2.2e-21
Identities = 76/259 (29%), Positives = 123/259 (47%)
Query: 32 YDLVITHALEWPSLTVEWLPDREEPPGKDYS-VQKMILGTHTSENEPNYLMLAQV-QLPL 89
YD++ + ++EWP L+ + D Y ++ GT E + N +++ + QL
Sbjct: 92 YDMMHSMSVEWPCLSFHPIKDELGAQRNKYPHTMYLVAGTQADEAKNNKVIIMKAKQLHK 151
Query: 90 -----DDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGEVNRARYMPQNPFLIAT 143
+DS++D DD+ SD + ++ + INH+G VNR R M Q ++AT
Sbjct: 152 TKHDDEDSDDDEDSDDDEESDDEDDEDKDVDPELQLAFINHNGAVNRIRSMDQQSNIVAT 211
Query: 144 KTVSAEVYVFDYSKH----PSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199
+ + VY+++ + H ++ +P + HS EGY L WS G L +G
Sbjct: 212 WSDNRSVYIWNIANHLKALDNETVAPKQTAPLHTISNHSIEGYALDWSPKIAGRLATG-- 269
Query: 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259
D ++ NA+ + Q FK H VED+ W E +F S DQ + IWD+R
Sbjct: 270 DCNNSIFVTNASESTWKTDT-QAFKGHTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK 328
Query: 260 PSVSKPVQSVVAHQSEVGV 278
P KP +V AH ++V V
Sbjct: 329 P---KPAITVKAHTADVNV 344
Score = 123 (48.4 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 36/134 (26%), Positives = 60/134 (44%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H V ++ P + A+ ++ V ++D K P P + ++ H+ +
Sbjct: 295 HTESVEDIQWSPSEEKVFASCSIDQTVRIWDIRK-----P-----KPAITVKAHTADVNV 344
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE-YL 242
+SWS+ E L+SG DD +WD+ A N + FK H G + + W+ E +
Sbjct: 345 ISWSRNVEYLLVSGCDDGSFRVWDLRAFKDNSPVSD---FKYHTGPITSIEWNPYEESQV 401
Query: 243 FGSVGDDQYLLIWD 256
S DDQ + IWD
Sbjct: 402 IVSSSDDQ-VTIWD 414
>CGD|CAL0005992 [details] [associations]
symbol:orf19.3581 species:5476 "Candida albicans" [GO:0042393
"histone binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0033186 "CAF-1 complex" evidence=IEA] [GO:0006335
"DNA replication-dependent nucleosome assembly" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0005992 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 EMBL:AACQ01000094
EMBL:AACQ01000093 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 RefSeq:XP_714940.1 RefSeq:XP_715003.1
ProteinModelPortal:Q59ZD9 STRING:Q59ZD9 GeneID:3643390
GeneID:3643420 KEGG:cal:CaO19.11065 KEGG:cal:CaO19.3581
Uniprot:Q59ZD9
Length = 435
Score = 219 (82.2 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 45/152 (29%), Positives = 87/152 (57%)
Query: 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPD-------REEPPGKDYSVQKMILGTH 71
+ Y++WKKN P LYD ++T++L WPSL+V++ PD E + Q+++LGT
Sbjct: 41 QNYRVWKKNAPLLYDYLVTNSLLWPSLSVQFFPDITHINDLGENKNEEQIIAQRILLGTF 100
Query: 72 TSENEPNYLMLAQVQLPLDDSEN---DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEV 128
T +++ + Q+ + ++N + ++ +R +F + K + +Q+INH G+V
Sbjct: 101 TLGQAIDHISILQIPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKTKTLQKINHLGDV 160
Query: 129 NRARYMPQNPFLIATKTVSAEVYVFDYSKHPS 160
N+ RYMPQ P ++A+ + +++ ++H S
Sbjct: 161 NKVRYMPQKPNILASANNLGNLVIYERTRHKS 192
Score = 196 (74.1 bits), Expect = 2.4e-13, P = 2.4e-13
Identities = 52/211 (24%), Positives = 111/211 (52%)
Query: 64 QKMILGTHTSENEPNYLMLAQVQLPLDDSEN---DARHYDDDRSDFGGFGCANGKVQIIQ 120
Q+++LGT T +++ + Q+ + ++N + ++ +R +F + K + +Q
Sbjct: 93 QRILLGTFTLGQAIDHISILQIPSFKNLNQNIKINKLDFNPEREEFELTTPSLNKTKTLQ 152
Query: 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPS--KPPLDGACSPDLRLR--- 175
+INH G+VN+ RYMPQ P ++A+ + +++ ++H S LD +++R
Sbjct: 153 KINHLGDVNKVRYMPQKPNILASANNLGNLVIYERTRHKSFKNTILDDTDLSKVQVRLVN 212
Query: 176 GH---STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
H +T+ + + W++ EG LLS + + L+D+ ++++L Q ++ + V D
Sbjct: 213 KHIPSTTDIFAIDWNRNSEGLLLSADMNGLVNLYDLKKY-ESETLNESQYWENNAIGVND 271
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS 263
+ W H+ LF + D+ +L ++D R S +
Sbjct: 272 IEWFPTHDSLFCTADDNGWLKLYDTRNQSAA 302
Score = 65 (27.9 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 24/82 (29%), Positives = 32/82 (39%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GHS L W+ L S S D + L D++ N S + H V D
Sbjct: 349 LHGHSDSVTQLKWNPKCHNILGSSSSDHSVKLHDMS----NDSTIFTHLG--HMLGVNDF 402
Query: 234 AWHLRHEYLFGSVGDDQYLLIW 255
W ++ SV DD L +W
Sbjct: 403 DWSYADPWMVASVADDNSLHVW 424
Score = 49 (22.3 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
Identities = 16/68 (23%), Positives = 28/68 (41%)
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
L +G + I +WDI + SL + H V + W+ + + GS D +
Sbjct: 325 LATGDSNGVIKMWDIRNF--DNSLSELH---GHSDSVTQLKWNPKCHNILGSSSSDHSVK 379
Query: 254 IWDLRTPS 261
+ D+ S
Sbjct: 380 LHDMSNDS 387
>UNIPROTKB|E9PND5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] GO:GO:0016581 InterPro:IPR022052
Pfam:PF12265 EMBL:AC114489 HGNC:HGNC:9887 ChiTaRS:RBBP4
IPI:IPI00979287 ProteinModelPortal:E9PND5 SMR:E9PND5
Ensembl:ENST00000490500 ArrayExpress:E9PND5 Bgee:E9PND5
Uniprot:E9PND5
Length = 68
Score = 235 (87.8 bits), Expect = 9.2e-20, P = 9.2e-20
Identities = 40/68 (58%), Positives = 55/68 (80%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THALEWPSLT +WLPD P GKD+S+ +++LGTHTS+ E N+L++A VQLP DD++ D
Sbjct: 1 MTHALEWPSLTAQWLPDVTRPEGKDFSIHRLVLGTHTSD-EQNHLVIASVQLPNDDAQFD 59
Query: 96 ARHYDDDR 103
A HYD ++
Sbjct: 60 ASHYDSEK 67
>UNIPROTKB|C9J7L0 [details] [associations]
symbol:RBBP7 "Histone-binding protein RBBP7" species:9606
"Homo sapiens" [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] GO:GO:0005634 GO:GO:0000122
InterPro:IPR022052 Pfam:PF12265 EMBL:AL929302 HGNC:HGNC:9890
ChiTaRS:RBBP7 IPI:IPI00947544 ProteinModelPortal:C9J7L0 SMR:C9J7L0
STRING:C9J7L0 Ensembl:ENST00000468092 ArrayExpress:C9J7L0
Bgee:C9J7L0 Uniprot:C9J7L0
Length = 68
Score = 215 (80.7 bits), Expect = 1.2e-17, P = 1.2e-17
Identities = 37/68 (54%), Positives = 55/68 (80%)
Query: 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95
+THAL+WPSLTV+WLP+ +P GKDY++ ++LGTHTS+ E N+L++A+V +P DD++ D
Sbjct: 1 MTHALQWPSLTVQWLPEVTKPEGKDYALHWLVLGTHTSD-EQNHLVVARVHIPNDDAQFD 59
Query: 96 ARHYDDDR 103
A H D D+
Sbjct: 60 ASHCDSDK 67
>SGD|S000000399 [details] [associations]
symbol:MSI1 "Subunit of chromatin assembly factor I (CAF-1)"
species:4932 "Saccharomyces cerevisiae" [GO:0033186 "CAF-1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0005737
"cytoplasm" evidence=IEA;IDA] [GO:0006335 "DNA
replication-dependent nucleosome assembly" evidence=IDA]
[GO:0042393 "histone binding" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000399 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BK006936 EMBL:Z21487
GO:GO:0006335 GO:GO:0033186 InterPro:IPR022052 Pfam:PF12265
HOGENOM:HOG000160330 EMBL:M27300 EMBL:Z36064 EMBL:AY692834
PIR:S07865 RefSeq:NP_009754.1 ProteinModelPortal:P13712 SMR:P13712
DIP:DIP-338N IntAct:P13712 MINT:MINT-386252 STRING:P13712
PaxDb:P13712 PeptideAtlas:P13712 EnsemblFungi:YBR195C GeneID:852494
KEGG:sce:YBR195C CYGD:YBR195c OMA:MPDVTKT OrthoDB:EOG44TSHP
NextBio:971486 Genevestigator:P13712 GermOnline:YBR195C
Uniprot:P13712
Length = 422
Score = 197 (74.4 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 45/150 (30%), Positives = 78/150 (52%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+ E Y WKKNT LYD + T++ +WPSLT ++ PD + + +++L + TS +
Sbjct: 19 LQERYSHWKKNTKLLYDYLNTNSTKWPSLTCQFFPDLDTTSDE----HRILLSSFTSSQK 74
Query: 77 PN--YLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN-GKVQIIQQIN---HDGEVNR 130
P + ++++ + ++D D +F ++ I+ +GE NR
Sbjct: 75 PEDETIYISKISTLGHIKWSSLNNFDMDEMEFKPENSTRFPSKHLVNDISIFFPNGECNR 134
Query: 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPS 160
ARY+PQNP +IA + +Y+FD +KH S
Sbjct: 135 ARYLPQNPDIIAGASSDGAIYIFDRTKHGS 164
Score = 69 (29.3 bits), Expect = 3.5e-17, Sum P(2) = 3.5e-17
Identities = 21/93 (22%), Positives = 44/93 (47%)
Query: 215 KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAH 272
+ +EAM +AW+L+ E L S + + +WD++ S P+ + V+
Sbjct: 188 QDVEAMDTSSADINEATSLAWNLQQEALLLSSHSNGQVQVWDIKQYSHENPIIDLPLVSI 247
Query: 273 QSEVGVSILNASFRLSHEDT-CTCTHRHSRYLL 304
S+ G ++ + ++ +H+ CT ++ LL
Sbjct: 248 NSD-GTAVNDVTWMPTHDSLFAACTEGNAVSLL 279
>TAIR|locus:2050388 [details] [associations]
symbol:AT2G19540 "AT2G19540" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AC005917
InterPro:IPR022052 Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000036730
KO:K14848 OMA:NRLMMLR UniGene:At.24966 EMBL:AF370506 EMBL:AY128814
IPI:IPI00526267 PIR:A84578 RefSeq:NP_179544.1
ProteinModelPortal:Q9ZUN8 SMR:Q9ZUN8 STRING:Q9ZUN8 PaxDb:Q9ZUN8
PRIDE:Q9ZUN8 EnsemblPlants:AT2G19540.1 GeneID:816473
KEGG:ath:AT2G19540 TAIR:At2g19540 InParanoid:Q9ZUN8
PhylomeDB:Q9ZUN8 ProtClustDB:CLSN2683177 ArrayExpress:Q9ZUN8
Genevestigator:Q9ZUN8 Uniprot:Q9ZUN8
Length = 469
Score = 216 (81.1 bits), Expect = 5.0e-16, P = 5.0e-16
Identities = 74/229 (32%), Positives = 100/229 (43%)
Query: 90 DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAE 149
D+ E+D D D D G +Q+ +++ H G VNR R MPQN + + S
Sbjct: 126 DEDEDDEDDSDSDDDD-GDEASKTPNIQV-RRVAHHGCVNRIRAMPQNSHICVSWADSGH 183
Query: 150 VYVFDYSKH-----PSKPP-LDGAC-----SPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198
V V+D S H S+ DG +P + GH EGY + WS G LLSG
Sbjct: 184 VQVWDMSSHLNALAESETEGKDGTSPVLNQAPLVNFSGHKDEGYAIDWSPATAGRLLSGD 243
Query: 199 DDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
+ I LW+ P + S I F H VED+ W E +F S D + +WD+
Sbjct: 244 CKSMIHLWE----PASGSWAVDPIPFAGHTASVEDLQWSPAEENVFASCSVDGSVAVWDI 299
Query: 258 RTPSVSKPVQSVVAHQSEVGVSILN--ASFRL-SHEDTCTCTHRHSRYL 303
R P S AH ++V V N AS L S D T + R R +
Sbjct: 300 RLGK--SPALSFKAHNADVNVISWNRLASCMLASGSDDGTFSIRDLRLI 346
>CGD|CAL0001341 [details] [associations]
symbol:orf19.6355 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0042254
"ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/279 (27%), Positives = 121/279 (43%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDY-SVQKMILGTHTSENEPNYLMLAQVQ- 86
P +Y+++ L WP LTV+ L D + Y + + T ++ + N L+ +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 87 ----LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ----NP 138
L D++E D DDD D + + I + H NR R P
Sbjct: 180 LAKTLVKDENEEDEEDEDDD-DDVDSDPILDSE-SI--PLRHT--TNRIRVSPHAQQTGE 233
Query: 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR------LRGH-STEGYGLSWSKF-K 190
+L A+ + + EVY+FD S G P +R H + EGYGL WS
Sbjct: 234 YLTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVN 293
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LLSG +I L N + + + F + +ED+ W +F + G D
Sbjct: 294 TGALLSGDMSGRIYL--TNRTTSSWTTDKTPFF-ASQSSIEDIQWSTGETTVFATGGCDG 350
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSH 289
Y+ IWD R+ KP SV+A +S+V V ++ S +++H
Sbjct: 351 YIRIWDTRSKK-HKPALSVIASKSDVNV--ISWSSKINH 386
>UNIPROTKB|Q59PD8 [details] [associations]
symbol:RRB1 "Likely nucleolar ribosome biogenesis factor
Rrb1p" species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 CGD:CAL0001341 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 EMBL:AACQ01000192 EMBL:AACQ01000189
InterPro:IPR022052 Pfam:PF12265 KO:K14848 RefSeq:XP_711573.1
RefSeq:XP_711642.1 ProteinModelPortal:Q59PD8 STRING:Q59PD8
GeneID:3646750 GeneID:3646833 KEGG:cal:CaO19.13712
KEGG:cal:CaO19.6355 eggNOG:NOG254774 Uniprot:Q59PD8
Length = 517
Score = 207 (77.9 bits), Expect = 1.3e-14, P = 1.3e-14
Identities = 77/279 (27%), Positives = 121/279 (43%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDY-SVQKMILGTHTSENEPNYLMLAQVQ- 86
P +Y+++ L WP LTV+ L D + Y + + T ++ + N L+ +
Sbjct: 120 PTVYEMLHNINLPWPCLTVDILSDSLGNERRSYPATVYLATATQAAKAKDNELLAMKASS 179
Query: 87 ----LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ----NP 138
L D++E D DDD D + + I + H NR R P
Sbjct: 180 LAKTLVKDENEEDEEDEDDD-DDVDSDPILDSE-SI--PLRHT--TNRIRVSPHAQQTGE 233
Query: 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR------LRGH-STEGYGLSWSKF-K 190
+L A+ + + EVY+FD S G P +R H + EGYGL WS
Sbjct: 234 YLTASMSENGEVYIFDLSAQYKAFDTPGYMIPKSSKRPIHTIRAHGNVEGYGLDWSPLVN 293
Query: 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250
G LLSG +I L N + + + F + +ED+ W +F + G D
Sbjct: 294 TGALLSGDMSGRIYL--TNRTTSSWTTDKTPFF-ASQSSIEDIQWSTGETTVFATGGCDG 350
Query: 251 YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSH 289
Y+ IWD R+ KP SV+A +S+V V ++ S +++H
Sbjct: 351 YIRIWDTRSKK-HKPALSVIASKSDVNV--ISWSSKINH 386
>CGD|CAL0003130 [details] [associations]
symbol:orf19.7185 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 165 (63.1 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+++NEE+KIWKK P LYD + T AL+ PSL +WLP D + K ++GT+
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQS-DLEL-KFLIGTNAIN 127
Query: 75 NEPNYLMLAQVQLPLD-DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
NYL L + LP D+ D D F +++ Q E+N+ +
Sbjct: 128 KSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNF-------KVVTQWKQTQEINKLKV 180
Query: 134 MPQNPFLI 141
P +
Sbjct: 181 SPNGSLAV 188
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/161 (29%), Positives = 72/161 (44%)
Query: 110 GCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS 169
G +++ Q E+N+ + P + SA+ + Y+ LD S
Sbjct: 157 GIDTSNFKVVTQWKQTQEINKLKVSPNGSLAVG---FSADGVIRSYN-------LDNFDS 206
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
D + H G L W G LSGS+DAQI LW ++ KS +Q+FK H G
Sbjct: 207 VDYKY--HKQGGIALDWVD-NNG-FLSGSNDAQIALWQVD-----KSSTPLQLFKGHHGA 257
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSV 269
+ D++ ++ ++LFGSV DD D R + PV +V
Sbjct: 258 INDIS-SIKEKHLFGSVSDDSTTQFHDTRVNATDINPVITV 297
Score = 65 (27.9 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
H D H + + +FGSVGDD+ L IW ++ +P Q Q +
Sbjct: 414 HTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQED 463
Score = 63 (27.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 29/117 (24%), Positives = 50/117 (42%)
Query: 164 LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWD--INAAPKNKSLEAM 220
+D + +P +GH G S KE HL S SDD+ D +NA N
Sbjct: 241 VDKSSTPLQLFKGH--HGAINDISSIKEKHLFGSVSDDSTTQFHDTRVNATDINP----- 293
Query: 221 QIFKVHEGVVED-VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
+ V +++ + +H + L+ + G D + ++D+R + S P + H V
Sbjct: 294 -VITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIR--NYSTPFRKFYGHNDSV 347
Score = 59 (25.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
+G D + L+DI +N S + + H V + W + + S G D+ ++ W
Sbjct: 318 TGGKDNVVSLYDI----RNYSTPFRKFYG-HNDSVRQLQWDWNNPDILVSCGLDKRIIFW 372
Query: 256 DLR 258
DL+
Sbjct: 373 DLK 375
Score = 44 (20.5 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208
+P + GH+ L W L+S D +I WD+
Sbjct: 335 TPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDL 374
>UNIPROTKB|Q5A0B0 [details] [associations]
symbol:CaO19.7185 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
CGD:CAL0003130 GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR022052 Pfam:PF12265 EMBL:AACQ01000089
RefSeq:XP_715234.1 RefSeq:XP_889000.1 ProteinModelPortal:Q5A0B0
GeneID:3643101 GeneID:3704066 KEGG:cal:CaO19.7185
KEGG:cal:CaO19_7185 HOGENOM:HOG000137539 Uniprot:Q5A0B0
Length = 485
Score = 165 (63.1 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSE 74
+++NEE+KIWKK P LYD + T AL+ PSL +WLP D + K ++GT+
Sbjct: 70 KIVNEEFKIWKKTVPLLYDFIHTFALDNPSLVFQWLPTTSVSQS-DLEL-KFLIGTNAIN 127
Query: 75 NEPNYLMLAQVQLPLD-DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARY 133
NYL L + LP D+ D D F +++ Q E+N+ +
Sbjct: 128 KSENYLKLTSISLPSTLVGATDSIPVPSDGIDTSNF-------KVVTQWKQTQEINKLKV 180
Query: 134 MPQNPFLI 141
P +
Sbjct: 181 SPNGSLAV 188
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 47/161 (29%), Positives = 72/161 (44%)
Query: 110 GCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS 169
G +++ Q E+N+ + P + SA+ + Y+ LD S
Sbjct: 157 GIDTSNFKVVTQWKQTQEINKLKVSPNGSLAVG---FSADGVIRSYN-------LDNFDS 206
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
D + H G L W G LSGS+DAQI LW ++ KS +Q+FK H G
Sbjct: 207 VDYKY--HKQGGIALDWVD-NNG-FLSGSNDAQIALWQVD-----KSSTPLQLFKGHHGA 257
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSV 269
+ D++ ++ ++LFGSV DD D R + PV +V
Sbjct: 258 INDIS-SIKEKHLFGSVSDDSTTQFHDTRVNATDINPVITV 297
Score = 65 (27.9 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 16/50 (32%), Positives = 24/50 (48%)
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSE 275
H D H + + +FGSVGDD+ L IW ++ +P Q Q +
Sbjct: 414 HTRRTNDFDIHPKVKNIFGSVGDDKLLEIWKPKSLPGDEPEQESTEVQED 463
Score = 63 (27.2 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 29/117 (24%), Positives = 50/117 (42%)
Query: 164 LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWD--INAAPKNKSLEAM 220
+D + +P +GH G S KE HL S SDD+ D +NA N
Sbjct: 241 VDKSSTPLQLFKGH--HGAINDISSIKEKHLFGSVSDDSTTQFHDTRVNATDINP----- 293
Query: 221 QIFKVHEGVVED-VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
+ V +++ + +H + L+ + G D + ++D+R + S P + H V
Sbjct: 294 -VITVENSHIQNCIQFHPDIQTLYATGGKDNVVSLYDIR--NYSTPFRKFYGHNDSV 347
Score = 59 (25.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
+G D + L+DI +N S + + H V + W + + S G D+ ++ W
Sbjct: 318 TGGKDNVVSLYDI----RNYSTPFRKFYG-HNDSVRQLQWDWNNPDILVSCGLDKRIIFW 372
Query: 256 DLR 258
DL+
Sbjct: 373 DLK 375
Score = 44 (20.5 bits), Expect = 2.2e-13, Sum P(3) = 2.2e-13
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208
+P + GH+ L W L+S D +I WD+
Sbjct: 335 TPFRKFYGHNDSVRQLQWDWNNPDILVSCGLDKRIIFWDL 374
>SGD|S000004738 [details] [associations]
symbol:RRB1 "Nuclear protein involved in early steps of
ribosome biogenesis" species:4932 "Saccharomyces cerevisiae"
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA;IMP;IPI] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004738 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0042254 EMBL:BK006946
GO:GO:0006364 InterPro:IPR022052 Pfam:PF12265 EMBL:Z48622
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4XWK6B PIR:S53061 RefSeq:NP_013850.1
ProteinModelPortal:Q04225 SMR:Q04225 DIP:DIP-6263N IntAct:Q04225
MINT:MINT-1168783 STRING:Q04225 PaxDb:Q04225 PeptideAtlas:Q04225
EnsemblFungi:YMR131C GeneID:855161 KEGG:sce:YMR131C CYGD:YMR131c
NextBio:978584 Genevestigator:Q04225 GermOnline:YMR131C
Uniprot:Q04225
Length = 511
Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
Identities = 77/266 (28%), Positives = 119/266 (44%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTS-----ENEPNYLMLA 83
P +Y+++ + WP LT++ +PD ++Y Q ++L T T ENE L L+
Sbjct: 115 PTVYEMLHNVNMPWPCLTLDVIPDTLGSERRNYP-QSILLTTATQSSRKKENELMVLALS 173
Query: 84 QVQLPL--DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLI 141
+ L DD+E + +DD D N + + N +V+ Q L
Sbjct: 174 NLAKTLLKDDNEGEDDE-EDDEDDVDPV-IENENIPLRDTTNRL-KVSPFAISNQE-VLT 229
Query: 142 ATKTVSAEVYVFDY---SKHPSKPPLD---GACSPDLRLRGH-STEGYGLSWSKF-KEGH 193
AT + + +VY+++ SK S P A P ++ H + EGYGL WS K G
Sbjct: 230 ATMSENGDVYIYNLAPQSKAFSTPGYQIPKSAKRPIHTVKNHGNVEGYGLDWSPLIKTGA 289
Query: 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV-VEDVAWHLRHEYLFGSVGDDQYL 252
LLSG QI + + + + Q F V +ED+ W +F + G D Y+
Sbjct: 290 LLSGDCSGQIYFTQRHTS---RWVTDKQPFTVSNNKSIEDIQWSRTESTVFATAGCDGYI 346
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVGV 278
IWD R+ KP SV A ++V V
Sbjct: 347 RIWDTRSKK-HKPAISVKASNTDVNV 371
>ASPGD|ASPL0000069856 [details] [associations]
symbol:AN7205 species:162425 "Emericella nidulans"
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005634 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 EMBL:BN001304 InterPro:IPR022052
Pfam:PF12265 HOGENOM:HOG000036730 OMA:NRLMMLR
EnsemblFungi:CADANIAT00000249 Uniprot:C8VD17
Length = 492
Score = 177 (67.4 bits), Expect = 6.2e-11, P = 6.2e-11
Identities = 73/280 (26%), Positives = 116/280 (41%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPD-----REEPPGKDYSVQ-KMILGTHTSENEPNYLML 82
P YD++ T + WP L+ + + D R+ P Y+V G ENE L L
Sbjct: 93 PSTYDMLHTLSTPWPCLSFDIVRDTLGDNRKTYPATVYAVTGTQAEGRRAKENELMVLKL 152
Query: 83 AQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142
+ + ++E D+ DD D GG K I + RA PQ+
Sbjct: 153 SGLGKMERENETDSESDSDD--DEGGEAILEHK-SI--PLGSTANRIRAHQTPQSDITKP 207
Query: 143 TKTVSA------EVYVFDYSKHPSKPPLDG------ACSPDLRLRGHSTEGYGLSWSKFK 190
+T++A +V + D + H + + G A P LR H +EGY L WS
Sbjct: 208 PQTITATMLENSQVVIHDVTPHLTSFDVPGTMLPPSASKPLSTLRMHKSEGYALDWSPLH 267
Query: 191 E-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD 249
G LL+G +D I + + + F+ H VE++ W + +F S D
Sbjct: 268 PLGKLLTGDNDGLIYV--TTRTEGGGWVTDTRAFRGHASSVEELQWSPNEKNVFASASSD 325
Query: 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSH 289
+ +WD+R+ S S V + S V+++ S + SH
Sbjct: 326 GTVKVWDVRSKSRSPAVNVKI---SNTDVNVMTWSKQTSH 362
Score = 114 (45.2 bits), Expect = 0.00092, P = 0.00092
Identities = 55/233 (23%), Positives = 94/233 (40%)
Query: 35 VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDD--- 91
V+ H + P LT +P PP + + + H SE Y + PL
Sbjct: 221 VVIHDVT-PHLTSFDVPGTMLPPSASKPLSTLRM--HKSEG---YALDWSPLHPLGKLLT 274
Query: 92 SENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVY 151
+ND Y R++ GG+ + H V ++ P + A+ + V
Sbjct: 275 GDNDGLIYVTTRTEGGGWVTDTRAFR-----GHASSVEELQWSPNEKNVFASASSDGTVK 329
Query: 152 VFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS-GSDDAQICLWDINA 210
V+D SK + SP + ++ +T+ ++WSK + HLL+ G+DD Q +WD+
Sbjct: 330 VWDVR---SK-----SRSPAVNVKISNTDVNVMTWSK-QTSHLLATGADDGQWAVWDLRH 380
Query: 211 APKNKSLEA------MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
N S A + F H+ + + WH + + D + +WDL
Sbjct: 381 WKPNPSSSAPITASPVASFNFHKEPITSIEWHPTDDSVIAVGSADNTVTLWDL 433
>TAIR|locus:2134408 [details] [associations]
symbol:NFC5 "AT4G29730" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0006351 GO:GO:0016568
EMBL:AL161575 EMBL:AL079344 KO:K10752 InterPro:IPR022052
Pfam:PF12265 GO:GO:0080008 HOGENOM:HOG000160330
ProtClustDB:CLSN2918036 EMBL:BT010610 EMBL:AK176425 IPI:IPI00548369
PIR:T09936 RefSeq:NP_194702.2 UniGene:At.31893
ProteinModelPortal:Q9SU78 SMR:Q9SU78 STRING:Q9SU78 PaxDb:Q9SU78
PRIDE:Q9SU78 EnsemblPlants:AT4G29730.1 GeneID:829094
KEGG:ath:AT4G29730 GeneFarm:2946 TAIR:At4g29730 InParanoid:Q9SU78
OMA:VGKKSER PhylomeDB:Q9SU78 Genevestigator:Q9SU78
GermOnline:AT4G29730 Uniprot:Q9SU78
Length = 487
Score = 173 (66.0 bits), Expect = 1.8e-10, P = 1.8e-10
Identities = 74/285 (25%), Positives = 119/285 (41%)
Query: 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENE 76
+++ Y WK P LYD + H L WPSL+ W P E+ K Q++ L T+ +
Sbjct: 54 VDDTYSQWKTLLPILYDSFVNHTLVWPSLSCRWGPQLEQAGSK---TQRLYLSEQTNGSV 110
Query: 77 PNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ 136
PN L++A + ++ N+ H + + G+V I+++ + ++ A +
Sbjct: 111 PNTLVIANCET-VNRQLNEKAHSPFVKK-YKTI-IHPGEVNRIRELPQNSKIV-ATHTDS 166
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG-YGLSWSKFKEGHLL 195
LI + Y P D PDL L GH + + L+ E +L
Sbjct: 167 PDILIWNTETQPDRYAV-----LGAP--DSR--PDLLLIGHQDDAEFALAMCP-TEPFVL 216
Query: 196 SGSDDAQICLWDIN-----AAPKNKS-------------------LEAMQIFKVHEGVVE 231
SG D + LW+I A +KS + I+ H+ VE
Sbjct: 217 SGGKDKSVILWNIQDHITMAGSDSKSPGSSFKQTGEGSDKTGGPSVGPRGIYNGHKDTVE 276
Query: 232 DVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
DVA+ F SVGDD L++WD RT S ++ AH +++
Sbjct: 277 DVAFCPSSAQEFCSVGDDSCLMLWDART-GTSPAMKVEKAHDADL 320
>WB|WBGene00021899 [details] [associations]
symbol:Y54H5A.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0009792 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR EMBL:FO081201 RefSeq:NP_498091.1
ProteinModelPortal:Q9N393 SMR:Q9N393 DIP:DIP-26654N
MINT:MINT-1128766 STRING:Q9N393 PaxDb:Q9N393
EnsemblMetazoa:Y54H5A.1.1 EnsemblMetazoa:Y54H5A.1.2
EnsemblMetazoa:Y54H5A.1.3 GeneID:175701 KEGG:cel:CELE_Y54H5A.1
UCSC:Y54H5A.1.1 CTD:175701 WormBase:Y54H5A.1 InParanoid:Q9N393
NextBio:889274 Uniprot:Q9N393
Length = 453
Score = 168 (64.2 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 41/103 (39%), Positives = 53/103 (51%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
L GH L+WS + G L S S D I LWD +APK+ + +Q K HE V +
Sbjct: 271 LTGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQ--KAHESDVNVI 328
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
+W+ RHE L S GDD L IW L+T +PV H S +
Sbjct: 329 SWN-RHENLIVSGGDDGELKIWSLKTIQFGQPVALFKYHNSPI 370
Score = 128 (50.1 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 35/104 (33%), Positives = 51/104 (49%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
G EGYGL+WS K G L +G +I LW + + ++ A + H+ VED+AW
Sbjct: 226 GSGKEGYGLAWSSLKTGDLATGDIIKKIYLWQMKEGGQ-WAVGANPLTG-HKKSVEDLAW 283
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEVGV 278
L S D + +WD R+ V +V AH+S+V V
Sbjct: 284 SPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNV 327
Score = 125 (49.1 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 31/136 (22%), Positives = 59/136 (43%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H V + P L+A+ + + ++D P AC ++ + H ++
Sbjct: 274 HKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKD-----ACVCTVQ-KAHESDVNV 327
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+SW++ E ++SG DD ++ +W + + + +FK H + V WH F
Sbjct: 328 ISWNRH-ENLIVSGGDDGELKIWSLKTIQFG---QPVALFKYHNSPITSVDWHPHETTTF 383
Query: 244 GSVGDDQYLLIWDLRT 259
+ G+D IWD+ T
Sbjct: 384 MASGEDDQTTIWDIAT 399
Score = 41 (19.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 19/83 (22%), Positives = 35/83 (42%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPD-----REEPPGKDYSVQKMILGTHTSENEPNYLMLA 83
P Y L + +WP L+ + + D R + P + Y V GT + N +++
Sbjct: 61 PSAYKLFHSFNSDWPCLSFDVVKDGLGENRTQFPAECYIVS----GTQADKPRDNEIIVM 116
Query: 84 QVQ-LPLDDSENDARHYDDDRSD 105
++ L E + + D D S+
Sbjct: 117 GLKNLTTMRKEKENKGDDSDTSE 139
>POMBASE|SPBC1711.07 [details] [associations]
symbol:SPBC1711.07 "WD repeat protein Rrb1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=ISS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISS] [GO:0043234
"protein complex" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC1711.07 GO:GO:0005829
GO:GO:0043234 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 EMBL:CU329671 eggNOG:COG2319
GenomeReviews:CU329671_GR GO:GO:0042254 GO:GO:0006364
InterPro:IPR022052 Pfam:PF12265 HOGENOM:HOG000036730 KO:K14848
OMA:NRLMMLR RefSeq:NP_595880.1 ProteinModelPortal:Q9P783
STRING:Q9P783 EnsemblFungi:SPBC1711.07.1 GeneID:2539693
KEGG:spo:SPBC1711.07 OrthoDB:EOG4XWK6B NextBio:20800846
Uniprot:Q9P783
Length = 480
Score = 164 (62.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 72/275 (26%), Positives = 118/275 (42%)
Query: 29 PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILG----THTSENEPNYLMLAQ 84
P +Y+++ ++WP L+ + L D + + Q ++G +++NE + L+Q
Sbjct: 91 PSVYEMLHNIQVKWPFLSFDILQDSLGEERRAWPHQMYLVGGSQALDSNDNELTVMKLSQ 150
Query: 85 VQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYM--PQNPF--- 139
+ D +DA D SD + + I+ G NR R P N
Sbjct: 151 LYKTQHDENDDA----SDNSDV-----EEDPILEHKSISTKGACNRVRSARRPANSSKES 201
Query: 140 LIATKTVSAEVYVFDYSKHPSKPPLDGAC------SPDLRLRGHSTEGYGLSWSKFKEGH 193
L+A+ + +V+++D + H G SP + H TEGY L WS F E
Sbjct: 202 LLASFHETGKVHIWDIAPHLRSLDSPGVMVSRKENSPLYTVNRHKTEGYALDWSPF-EYS 260
Query: 194 LLSGSDDAQICLWDI-NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252
LLSG + +I L N + S F H VED+ W + +F S D
Sbjct: 261 LLSGDNANEIFLTKYSNGGWQTDSSP----FLSHTAAVEDLQWSPSEKNVFSSCSCDGTF 316
Query: 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL 287
IWD+R + + +V AH V V++L+ + R+
Sbjct: 317 RIWDVRNKQKTSAL-TVNAHPG-VDVNVLSWNTRV 349
>FB|FBgn0022288 [details] [associations]
symbol:l(2)09851 "lethal (2) 09851" species:7227 "Drosophila
melanogaster" [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0005634
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
KO:K14848 OMA:NRLMMLR EMBL:AY071477 EMBL:AY128462
RefSeq:NP_610182.3 UniGene:Dm.1493 UniGene:Dm.36762 SMR:Q8SYL1
IntAct:Q8SYL1 STRING:Q8SYL1 EnsemblMetazoa:FBtr0086043 GeneID:46662
KEGG:dme:Dmel_CG12792 UCSC:CG12792-RA FlyBase:FBgn0022288
InParanoid:Q8SYL1 OrthoDB:EOG441NSN GenomeRNAi:46662 NextBio:838859
Uniprot:Q8SYL1
Length = 456
Score = 157 (60.3 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/120 (34%), Positives = 55/120 (45%)
Query: 158 HPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216
H P DG D R L GHS L WS + L S S D I +WD A+P+
Sbjct: 248 HVWTPVEDGTWKVDQRPLAGHSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKAC 307
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
+ + H+ V ++W+ R+E S GDD YL IWDLR KP+ + H +
Sbjct: 308 MLTCE--DAHQSDVNVISWN-RNEPFIASGGDDGYLHIWDLRQFQSKKPIATFKHHTDHI 364
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/153 (25%), Positives = 66/153 (43%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H V ++ P ++A+ +V + ++D P K AC H ++
Sbjct: 268 HSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQK-----ACMLTCE-DAHQSDVNV 321
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
+SW++ E + SG DD + +WD+ K + FK H + V W +
Sbjct: 322 ISWNR-NEPFIASGGDDGYLHIWDLRQFQSKKPIAT---FKHHTDHITTVEWSPAEATVL 377
Query: 244 GSVGDDQYLLIWDLRTPSVSKPV-QSVVAHQSE 275
S GDD + +WDL +V K + Q+V Q+E
Sbjct: 378 ASGGDDDQIALWDL---AVEKDIDQAVDPAQNE 407
Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 56/250 (22%), Positives = 94/250 (37%)
Query: 43 PSLTVEWLPDREEPPGKDYSVQKMIL-GTHTSENEPNYLMLAQVQLPLDDSENDA---RH 98
P L+ + +PD + + + I+ GT S N L++ ++ +ND
Sbjct: 74 PCLSFDVIPDELGSGRQSFPMTAYIVAGTQASRAHVNNLIVMKMSNLHKTQDNDGDEDEE 133
Query: 99 YDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSK 157
+DD+ D + H G VNR R N A+ + V ++D ++
Sbjct: 134 LEDDQDDVTDREELKKPQMTCALVKHQGCVNRVRARRLGNSVYAASWSELGRVNIWDLTQ 193
Query: 158 --------HPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209
+K P GH EG+ + WS +G L +G I +W
Sbjct: 194 PLQAVENAQLAKQYEQSEARPVFTFGGHQQEGFAIDWSPSADGVLATGDCRRDIHVWT-P 252
Query: 210 AAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-TPSVSKPVQS 268
++ + H VED+ W + S D+ + IWD R +P + +
Sbjct: 253 VEDGTWKVDQRPLAG-HSQSVEDLQWSPNERSVLASCSVDKTIRIWDCRASPQKACMLTC 311
Query: 269 VVAHQSEVGV 278
AHQS+V V
Sbjct: 312 EDAHQSDVNV 321
>ZFIN|ZDB-GENE-030131-9844 [details] [associations]
symbol:grwd1 "glutamate-rich WD repeat containing
1" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-030131-9844
GO:GO:0005634 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 GeneTree:ENSGT00550000075124
EMBL:CU459065 IPI:IPI00490298 Ensembl:ENSDART00000121998
ArrayExpress:F1QGP3 Bgee:F1QGP3 Uniprot:F1QGP3
Length = 452
Score = 150 (57.9 bits), Expect = 6.9e-08, P = 6.9e-08
Identities = 66/266 (24%), Positives = 111/266 (41%)
Query: 43 PSLTVEWLPDREEPPGKDYSVQKMIL-GTHTSENEPNYLMLAQVQ-LPLDDSENDARHYD 100
P L+ + + D E + + + ++ GT N L++ ++ L + + D
Sbjct: 75 PCLSFDVVLDGEGDRREQFPLSMVLCAGTQADTALSNRLIVMRMHNLQGTEKKKDEDKSS 134
Query: 101 DDRSDFGGFG-CANGKVQI-IQQINHDGEVNRARYMPQNP-FLIATKTVSAEVYVFDY-- 155
D+ SD + K Q+ + + H G +NR R + L A + +V +FD
Sbjct: 135 DEESDEDEDDEDEDKKPQLELAMMPHYGGINRVRVTQRGEQTLAAVWSEKGQVEIFDLRL 194
Query: 156 ---SKHPSKP-----PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207
+ H S + +P GH +EG+ + WS G ++SG I +W+
Sbjct: 195 QLEAVHNSTAMSAFIKQEKEATPLFSFAGHMSEGFAIDWSPKVPGRMVSGDCKKNIHVWE 254
Query: 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ 267
K ++ + F H VED+ W +F S DQ + IWD+R P S +
Sbjct: 255 PQEGGTWK-ID-QRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPPNSM-LS 311
Query: 268 SVVAHQSEVGVSILNAS--FRLSHED 291
+ AH S+V V N + F LS D
Sbjct: 312 ANEAHSSDVNVISWNRTEPFILSGGD 337
Score = 131 (51.2 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 39/120 (32%), Positives = 51/120 (42%)
Query: 158 HPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216
H +P G D R HS L WS + S S D I +WDI A P N
Sbjct: 251 HVWEPQEGGTWKIDQRPFSSHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRAPP-NSM 309
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
L A + H V ++W+ ++ S GDD L +WDLR +PV S H + V
Sbjct: 310 LSANE---AHSSDVNVISWNRTEPFIL-SGGDDGLLKVWDLRQFQSGRPVASFKQHSAPV 365
Score = 114 (45.2 bits), Expect = 0.00081, P = 0.00081
Identities = 34/139 (24%), Positives = 60/139 (43%)
Query: 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY 182
+H V ++ P + A+ +V + ++D PP + S + HS++
Sbjct: 270 SHSKSVEDLQWSPTEATVFASCSVDQSIRIWDIRA----PP-NSMLSAN---EAHSSDVN 321
Query: 183 GLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYL 242
+SW++ E +LSG DD + +WD+ + + + FK H V V W +
Sbjct: 322 VISWNR-TEPFILSGGDDGLLKVWDLRQFQSGRPVAS---FKQHSAPVTSVQWSPVDSSV 377
Query: 243 FGSVGDDQYLLIWDLRTPS 261
F + G D + WDL S
Sbjct: 378 FAASGADDVISQWDLSVES 396
>UNIPROTKB|E2RBY0 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR
EMBL:AAEX03000823 RefSeq:XP_854878.1 ProteinModelPortal:E2RBY0
Ensembl:ENSCAFT00000006420 GeneID:612058 KEGG:cfa:612058
NextBio:20897592 Uniprot:E2RBY0
Length = 440
Score = 147 (56.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 44/134 (32%), Positives = 58/134 (43%)
Query: 146 VSAEVYVFDYSK--HPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202
VS + D K H P G+ D R GH+ L WS ++ S S DA
Sbjct: 220 VSGRLLTGDCQKNIHLWTPTDGGSWHVDQRPFMGHTRSVEDLQWSPTEDTVFASCSADAS 279
Query: 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262
I +WDI AAP + + H+G V + W R +L S GDD L IWDLR
Sbjct: 280 IRIWDIRAAPSKACM--LTTTSAHDGDVNVINWSRREPFLL-SGGDDGALKIWDLRQFKS 336
Query: 263 SKPVQSVVAHQSEV 276
PV + H + +
Sbjct: 337 GSPVATFKQHVAPI 350
Score = 138 (53.6 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 37/136 (27%), Positives = 61/136 (44%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D PSK AC H +
Sbjct: 252 MGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK-----ACMLTTT-SAHDGDV 305
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
++WS+ +E LLSG DD + +WD+ + KS + FK H + V WH +
Sbjct: 306 NVINWSR-REPFLLSGGDDGALKIWDLR---QFKSGSPVATFKQHVAPITSVEWHPQDSG 361
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 362 VFAASGADNQITQWDL 377
Score = 130 (50.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 56/225 (24%), Positives = 84/225 (37%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ L + DD + + K Q+ + + H G
Sbjct: 87 GTQAESAQSNRLMMLRMH-NLHGIKPPPSEGSDDEEEEDEEDEEDRKPQLELAMVPHYGG 145
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPL---------DGACSPDLRLR 175
+NR R ++ + P I ++ EV+ P P
Sbjct: 146 INRVRVSWLGEEPVAGIWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQARVKPIFTFA 205
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVA 234
GH EG+ L WS G LL+G I LW S Q F H VED+
Sbjct: 206 GHMGEGFALDWSPRVSGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFMGHTRSVEDLQ 262
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGV 278
W + +F S D + IWD+R PS + + + AH +V V
Sbjct: 263 WSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTTSAHDGDVNV 307
>MGI|MGI:2141989 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:2141989 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:AC149053 CTD:83743
GeneTree:ENSGT00550000075124 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OMA:NRLMMLR EMBL:AB001539
EMBL:CH466603 EMBL:BC008121 IPI:IPI00123005 RefSeq:NP_700468.2
UniGene:Mm.274847 ProteinModelPortal:Q810D6 STRING:Q810D6
PhosphoSite:Q810D6 PaxDb:Q810D6 PRIDE:Q810D6
Ensembl:ENSMUST00000107723 Ensembl:ENSMUST00000131384 GeneID:101612
KEGG:mmu:101612 InParanoid:Q810D6 NextBio:355042 CleanEx:MM_GRWD1
Genevestigator:Q810D6 GermOnline:ENSMUSG00000053801 Uniprot:Q810D6
Length = 446
Score = 147 (56.8 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 40/120 (33%), Positives = 55/120 (45%)
Query: 158 HPSKPPLDGACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216
H P G+ + D R GH+ L WS ++ S S DA I +WDI AAP
Sbjct: 240 HLWTPTEGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKAC 299
Query: 217 LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
+ + H+G V ++W R +L S GDD L +WDLR PV + H + V
Sbjct: 300 M--LTTATAHDGDVNVISWSRREPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHMAPV 356
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D P K AC H +
Sbjct: 258 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGK-----ACMLTTAT-AHDGDV 311
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
+SWS+ +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 312 NVISWSR-REPFLLSGGDDGALKVWDLR---QFKSGSPVATFKQHMAPVTSVEWHPQDSG 367
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 368 VFAASGADNQITQWDL 383
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 54/225 (24%), Positives = 86/225 (38%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ + + DDD D K Q+ + + H G
Sbjct: 92 GTQAESAQSNRLMMLRMHNLHGTRPSPSEGSDDDEEDEDEEDEEEQKPQLELAMVPHYGG 151
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVY----VFDYSKHPSKPPL-----DGACSPDLRLR 175
+NR R ++ + P + ++ EV+ + P + P
Sbjct: 152 INRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARIKPIFSFA 211
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVA 234
GH EG+ L WS G LL+G + LW + S Q F H VED+
Sbjct: 212 GHMGEGFALDWSPRVPGRLLTGDCQKNVHLW---TPTEGGSWNVDQRPFVGHTRSVEDLQ 268
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGV 278
W + +F S D + IWD+R P + + + AH +V V
Sbjct: 269 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTATAHDGDVNV 313
>RGD|1310649 [details] [associations]
symbol:Grwd1 "glutamate-rich WD repeat containing 1"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:1310649 GO:GO:0005737
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 CTD:83743 HOGENOM:HOG000036730
HOVERGEN:HBG051847 KO:K14848 OrthoDB:EOG4CG084 EMBL:BC083883
IPI:IPI00367307 RefSeq:NP_001012067.1 UniGene:Rn.33523
ProteinModelPortal:Q5XI13 STRING:Q5XI13 PRIDE:Q5XI13 GeneID:308592
KEGG:rno:308592 UCSC:RGD:1310649 NextBio:659230 ArrayExpress:Q5XI13
Genevestigator:Q5XI13 GermOnline:ENSRNOG00000021058 Uniprot:Q5XI13
Length = 445
Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 40/116 (34%), Positives = 54/116 (46%)
Query: 163 PLDGAC-SPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
P DG + D R GH+ L WS ++ S S DA I +WDI AAP + +
Sbjct: 243 PTDGGSWNVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGKACM--L 300
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
H+G V ++W R +L S GDD L +WDLR PV + H + V
Sbjct: 301 TTAAAHDGDVNVISWSRREPFLL-SGGDDGTLKVWDLRQFKSGSPVATFKQHVAPV 355
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D P K AC H +
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPGK-----ACMLTTAA-AHDGDV 310
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
+SWS+ +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 311 NVISWSR-REPFLLSGGDDGTLKVWDLR---QFKSGSPVATFKQHVAPVTSVEWHPQDSG 366
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 367 VFAASGADNQITQWDL 382
Score = 133 (51.9 bits), Expect = 5.7e-06, P = 5.7e-06
Identities = 54/225 (24%), Positives = 85/225 (37%)
Query: 69 GTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGE 127
GT + N LM+ ++ L + DD D K Q+ + + H G
Sbjct: 92 GTQAESAQSNRLMMLRMH-NLHGTRPPPSEGSDDEDDEDEEDEEERKPQLELAMVPHYGG 150
Query: 128 VNRAR--YMPQNPFL-IATKTVSAEVY----VFDYSKHPSKPPL-----DGACSPDLRLR 175
+NR R ++ + P + ++ EV+ + P + P
Sbjct: 151 INRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALAIFLRDEQARVKPIFSFA 210
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD-INAAPKNKSLEAMQIFKVHEGVVEDVA 234
GH EG+ L WS G LL+G I LW + N + F H VED+
Sbjct: 211 GHMGEGFALDWSPRVPGRLLTGDCQKNIHLWTPTDGGSWNVD---QRPFVGHTRSVEDLQ 267
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGV 278
W + +F S D + IWD+R P + + + AH +V V
Sbjct: 268 WSPTEDTVFASCSADASIRIWDIRAAPGKACMLTTAAAHDGDVNV 312
>UNIPROTKB|Q9BQ67 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
CTD:83743 HOGENOM:HOG000036730 HOVERGEN:HBG051847 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 EMBL:AF337808 EMBL:BC002440
EMBL:AB075822 IPI:IPI00027831 RefSeq:NP_113673.3 UniGene:Hs.400625
ProteinModelPortal:Q9BQ67 SMR:Q9BQ67 IntAct:Q9BQ67
MINT:MINT-1148872 STRING:Q9BQ67 PhosphoSite:Q9BQ67 DMDM:18202731
SWISS-2DPAGE:Q9BQ67 PaxDb:Q9BQ67 PeptideAtlas:Q9BQ67 PRIDE:Q9BQ67
DNASU:83743 Ensembl:ENST00000253237 GeneID:83743 KEGG:hsa:83743
UCSC:uc002pjd.2 GeneCards:GC19P048949 H-InvDB:HIX0080107
HGNC:HGNC:21270 HPA:HPA042643 MIM:610597 neXtProt:NX_Q9BQ67
PharmGKB:PA134897548 InParanoid:Q9BQ67 PhylomeDB:Q9BQ67
GenomeRNAi:83743 NextBio:72761 ArrayExpress:Q9BQ67 Bgee:Q9BQ67
CleanEx:HS_GRWD1 Genevestigator:Q9BQ67 GermOnline:ENSG00000105447
Uniprot:Q9BQ67
Length = 446
Score = 144 (55.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 41/116 (35%), Positives = 52/116 (44%)
Query: 163 PLDGAC-SPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
P DG D R GH+ L WS + S S DA I +WDI AAP + +
Sbjct: 244 PTDGGSWHVDQRPFVGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACM--L 301
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
H+G V ++W R +L S GDD L IWDLR PV + H + V
Sbjct: 302 TTATAHDGDVNVISWSRREPFLL-SGGDDGALKIWDLRQFKSGSPVATFKQHVAPV 356
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 39/136 (28%), Positives = 61/136 (44%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D PSK AC H +
Sbjct: 258 VGHTRSVEDLQWSPTENTVFASCSADASIRIWDIRAAPSK-----ACMLTTAT-AHDGDV 311
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
+SWS+ +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 312 NVISWSR-REPFLLSGGDDGALKIWDLR---QFKSGSPVATFKQHVAPVTSVEWHPQDSG 367
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 368 VFAASGADHQITQWDL 383
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 57/230 (24%), Positives = 86/230 (37%)
Query: 69 GTHTSENEPNYLMLAQVQ-----LPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQI 122
GT + N LM+ ++ P +D ++D D K Q+ + +
Sbjct: 92 GTQAESAQSNRLMMLRMHNLHGTKPPPSEGSDEEEEEEDEEDE-----EERKPQLELAMV 146
Query: 123 NHDGEVNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGAC---------SP 170
H G +NR R ++ + P + ++ EV+ + P A P
Sbjct: 147 PHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVEEPQALAAFLRDEQAQMKP 206
Query: 171 DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGV 229
GH EG+ L WS G LL+G I LW S Q F H
Sbjct: 207 IFSFAGHMGEGFALDWSPRVTGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFVGHTRS 263
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGV 278
VED+ W +F S D + IWD+R PS + + + AH +V V
Sbjct: 264 VEDLQWSPTENTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNV 313
>UNIPROTKB|E1BYP4 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0001764 "neuron migration" evidence=IEA] [GO:0001958
"endochondral ossification" evidence=IEA] [GO:0005053 "peroxisome
matrix targeting signal-2 binding" evidence=IEA] [GO:0005782
"peroxisomal matrix" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006635 "fatty acid beta-oxidation" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 GO:GO:0016558 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AADN02025502
EMBL:AADN02025503 IPI:IPI00583820 RefSeq:XP_419724.3
UniGene:Gga.10547 ProteinModelPortal:E1BYP4
Ensembl:ENSGALT00000022499 GeneID:421687 KEGG:gga:421687
Uniprot:E1BYP4
Length = 321
Score = 141 (54.7 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 45/141 (31%), Positives = 65/141 (46%)
Query: 137 NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK-EGHLL 195
N ++ T + + ++D +K P K PL + H+ E Y + WS+ + E ++
Sbjct: 77 NEHVLITSSGDGSLQIWDIAK-P-KGPLQV-------YKEHTQEAYSVDWSQTRGEQLVV 127
Query: 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255
SGS D LWD KSL FK HEGV+ W F S DQ L IW
Sbjct: 128 SGSWDQTAKLWD---PAVGKSLRT---FKGHEGVIYSTIWSPHIPGCFASASGDQTLRIW 181
Query: 256 DLRTPSVSKPVQSVVAHQSEV 276
D++ P V + AHQ+E+
Sbjct: 182 DVKAPGVRLVIP---AHQAEI 199
>UNIPROTKB|F1RL85 [details] [associations]
symbol:GRWD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 InterPro:IPR022052 Pfam:PF12265
GeneTree:ENSGT00550000075124 KO:K14848 OMA:NRLMMLR EMBL:FP102301
RefSeq:XP_003127319.1 UniGene:Ssc.24214 Ensembl:ENSSSCT00000003475
GeneID:100521273 KEGG:ssc:100521273 Uniprot:F1RL85
Length = 445
Score = 143 (55.4 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 48/174 (27%), Positives = 74/174 (42%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D PSK AC H+ +
Sbjct: 257 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK-----ACMLTTPA-AHNGDV 310
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
+SWS+ +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 311 NVISWSR-QEPFLLSGGDDGALKVWDLR---QFKSGSPVATFKQHVAPVTSVEWHPQDSG 366
Query: 242 LFGSVGDDQYLLIWDL---RTPS----------VSKPVQSVVAHQSEVGVSILN 282
+F + G D + WDL R P V P Q + HQ E + L+
Sbjct: 367 VFAASGADNQITQWDLAVERDPEAGDTETDPGLVGLPQQLLFVHQGETDLKELH 420
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 39/116 (33%), Positives = 53/116 (45%)
Query: 163 PLD-GACSPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
P D G+ D R GH+ L WS ++ S S DA I +WDI AAP + +
Sbjct: 243 PTDSGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACM--L 300
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
H G V ++W + +L S GDD L +WDLR PV + H + V
Sbjct: 301 TTPAAHNGDVNVISWSRQEPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHVAPV 355
Score = 128 (50.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 34/110 (30%), Positives = 46/110 (41%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P GH EG+ L WS G LL+G I LW + F H
Sbjct: 205 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW--TPTDSGSWHVDQRPFVGHTRS 262
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGV 278
VED+ W + +F S D + IWD+R PS + + + AH +V V
Sbjct: 263 VEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTPAAHNGDVNV 312
>UNIPROTKB|Q1JQD2 [details] [associations]
symbol:GRWD1 "Glutamate-rich WD repeat-containing protein
1" species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005737 GO:GO:0005730
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR022052 Pfam:PF12265 EMBL:BC116037 IPI:IPI00715008
RefSeq:NP_001069707.1 UniGene:Bt.3201 ProteinModelPortal:Q1JQD2
STRING:Q1JQD2 Ensembl:ENSBTAT00000000088 GeneID:540739
KEGG:bta:540739 CTD:83743 GeneTree:ENSGT00550000075124
HOGENOM:HOG000036730 HOVERGEN:HBG051847 InParanoid:Q1JQD2 KO:K14848
OMA:NRLMMLR OrthoDB:EOG4CG084 NextBio:20878807 Uniprot:Q1JQD2
Length = 446
Score = 141 (54.7 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 40/116 (34%), Positives = 52/116 (44%)
Query: 163 PLDGAC-SPDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAM 220
P DG D R GH+ L WS ++ S S DA I +WDI AAP + +
Sbjct: 244 PTDGGSWHVDQRPFVGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACM--L 301
Query: 221 QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
H+G V + W R +L S GDD L +WDLR PV + H + V
Sbjct: 302 TTATAHDGDVNVINWSHREPFLL-SGGDDGALKVWDLRQFKSGSPVATFKQHVAPV 356
Score = 137 (53.3 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/136 (27%), Positives = 60/136 (44%)
Query: 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEG 181
+ H V ++ P + A+ + A + ++D PSK AC H +
Sbjct: 258 VGHTRSVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSK-----ACMLTTAT-AHDGDV 311
Query: 182 YGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEY 241
++WS +E LLSG DD + +WD+ + KS + FK H V V WH +
Sbjct: 312 NVINWSH-REPFLLSGGDDGALKVWDLR---QFKSGSPVATFKQHVAPVTSVEWHPQDSG 367
Query: 242 LFGSVGDDQYLLIWDL 257
+F + G D + WDL
Sbjct: 368 VFAASGADNQITQWDL 383
Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 60/239 (25%), Positives = 93/239 (38%)
Query: 69 GTHTSENEPNYLMLAQV------QLPLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQ 121
GT ++ N LM+ ++ + P + +D DD+ + K Q+ +
Sbjct: 92 GTQAESSQSNRLMMLRMHNLHGTKPPPPEGSDDEEEEDDEEDE------EERKPQLELAM 145
Query: 122 INHDGEVNRAR--YMPQNPFL-IATKTVSAEVYVFDYSKHPSKPPLDGAC---------S 169
+ H G +NR R ++ + P + ++ EV+ P A
Sbjct: 146 VPHYGGINRVRVSWLGEEPVAGVWSEKGQVEVFALRRLLQVVDDPQALATFLRDEQTRMK 205
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKVHEG 228
P GH EG+ L WS G LL+G I LW S Q F H
Sbjct: 206 PIFAFSGHMGEGFALDWSPRVPGRLLTGDCQKNIHLW---TPTDGGSWHVDQRPFVGHTR 262
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSEVGVSILNASFR 286
VED+ W + +F S D + IWD+R PS + + + AH +V V +N S R
Sbjct: 263 SVEDLQWSPTEDTVFASCSADASIRIWDIRAAPSKACMLTTATAHDGDVNV--INWSHR 319
>UNIPROTKB|F1S687 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 OMA:GHEYAVR GO:GO:0005053
GeneTree:ENSGT00700000104578 EMBL:CU407212
ProteinModelPortal:F1S687 Ensembl:ENSSSCT00000004599 Uniprot:F1S687
Length = 315
Score = 132 (51.5 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 37/112 (33%), Positives = 54/112 (48%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK 224
GA P + H+ E Y + WS+ + E ++SGS D + LWD ++ FK
Sbjct: 99 GAAGPLQVYKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG------RSLCTFK 152
Query: 225 VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
HE ++ W F S DQ L IWD++T V + V V AHQ+E+
Sbjct: 153 GHESIIYSTIWSPHIPGCFASASGDQTLRIWDVKTTGV-RIV--VPAHQAEI 201
>ASPGD|ASPL0000074357 [details] [associations]
symbol:AN4518 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001303 EMBL:AACD01000078
OrthoDB:EOG4RBTST RefSeq:XP_662122.1 ProteinModelPortal:Q5B4L2
EnsemblFungi:CADANIAT00005923 GeneID:2872316 KEGG:ani:AN4518.2
HOGENOM:HOG000184038 OMA:DVKWSHG Uniprot:Q5B4L2
Length = 1289
Score = 138 (53.6 bits), Expect = 6.7e-06, P = 6.7e-06
Identities = 38/136 (27%), Positives = 64/136 (47%)
Query: 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199
+IAT + + V+D H + L+ C R +GHS + + L+++ + LLSGS
Sbjct: 164 IIATAVANGRIVVYDL--H--RTGLE-YC----RFQGHSRQVHRLAFNPHQPAWLLSGSQ 214
Query: 200 DAQICLWDINAAPKNKSLE---AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256
DA I +WD+ P ++ + + + + V DV W LF D + +WD
Sbjct: 215 DAHIRMWDLRTVPTDRGVSVCGSRDQYNSNSDAVRDVRWSPGDGVLFAVATDSGAIQLWD 274
Query: 257 LRTPSVSKPVQSVVAH 272
+R S P+ + AH
Sbjct: 275 IRKSS--SPILRITAH 288
>DICTYBASE|DDB_G0270992 [details] [associations]
symbol:sec31 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030127 "COPII
vesicle coat" evidence=ISS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS] [GO:0006886
"intracellular protein transport" evidence=ISS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR004098
InterPro:IPR015943 Pfam:PF00400 Pfam:PF02840 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 dictyBase:DDB_G0270992 GO:GO:0006886
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0008380
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 GO:GO:0005681 GO:GO:0006888
GO:GO:0030127 eggNOG:NOG248389 KO:K14005 RefSeq:XP_646396.1
ProteinModelPortal:Q55CT5 STRING:Q55CT5 PRIDE:Q55CT5
EnsemblProtists:DDB0235185 GeneID:8617351 KEGG:ddi:DDB_G0270992
OMA:MMNQPPM Uniprot:Q55CT5
Length = 1355
Score = 138 (53.6 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/183 (27%), Positives = 92/183 (50%)
Query: 102 DRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSK 161
D +D GG + + + Q+ H G V + QNP L+A+ +EV+++D S P++
Sbjct: 108 DATDGGGSDDQSSLIGVGQR--HSGPVQSIDFNVQNPNLLASGGSDSEVFIWDLSD-PTQ 164
Query: 162 PPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAM 220
P A +P + + S++ ++W+K K H+L S S + I +WD+ + K+L +
Sbjct: 165 P---SALNPGSKSQ-QSSDITCVAWNK-KVAHILGSASYNGYIVIWDLKS---KKTLMTI 216
Query: 221 QIFKVHEGVVEDVAWHLRHE-YLFGSVGDDQYLLI--WDLRTPSVSKPVQSVVAHQSEV- 276
+ + + WH + + DD + +I WDLR + + PV+S+ H+ V
Sbjct: 217 ND-RNRKCKYRSIVWHPSEATQIVAASEDDDHPVIQAWDLR--NTTSPVKSMEGHKKGVW 273
Query: 277 GVS 279
G+S
Sbjct: 274 GLS 276
>UNIPROTKB|Q08DL6 [details] [associations]
symbol:PEX7 "Peroxisomal biogenesis factor 7" species:9913
"Bos taurus" [GO:0008611 "ether lipid biosynthetic process"
evidence=ISS] [GO:0016558 "protein import into peroxisome matrix"
evidence=ISS] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:DAAA02026741 EMBL:BC123679 IPI:IPI00715205
RefSeq:NP_001070358.1 UniGene:Bt.17803 STRING:Q08DL6
Ensembl:ENSBTAT00000022338 GeneID:533077 KEGG:bta:533077
InParanoid:Q08DL6 NextBio:20875902 Uniprot:Q08DL6
Length = 323
Score = 125 (49.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 39/111 (35%), Positives = 54/111 (48%)
Query: 167 ACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
A P + H+ E Y + WS+ + E ++SGS D + LWD KSL F+
Sbjct: 100 ATGPLQVFKEHTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRG 153
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
HE V+ W F S DQ L IWD++T V + V V AHQ+E+
Sbjct: 154 HESVIYSTIWSPHIPGCFASSSGDQTLRIWDVKTTGV-RIV--VPAHQAEI 201
>FB|FBgn0033526 [details] [associations]
symbol:Caf1-105 "Caf1-105" species:7227 "Drosophila
melanogaster" [GO:0006333 "chromatin assembly or disassembly"
evidence=ISS] [GO:0006334 "nucleosome assembly" evidence=NAS]
[GO:0003677 "DNA binding" evidence=NAS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0003677
eggNOG:COG2319 GeneTree:ENSGT00550000074968 KO:K10751
RefSeq:NP_610589.2 UniGene:Dm.4362 ProteinModelPortal:A1Z898
SMR:A1Z898 STRING:A1Z898 PaxDb:A1Z898 PRIDE:A1Z898
EnsemblMetazoa:FBtr0088310 GeneID:36107 KEGG:dme:Dmel_CG12892
UCSC:CG12892-RA CTD:36107 FlyBase:FBgn0033526 InParanoid:A1Z898
OMA:PIAFRRK OrthoDB:EOG476HFQ PhylomeDB:A1Z898 GenomeRNAi:36107
NextBio:796901 Bgee:A1Z898 Uniprot:A1Z898
Length = 747
Score = 130 (50.8 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 53/179 (29%), Positives = 82/179 (45%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDY-SKHPSKPPLDG-ACSPD-------LR- 173
H VN R+ P N L+A+ + V+++ + H +D CS L+
Sbjct: 70 HQRAVNAVRWSP-NGELLASGDDESVVFIWKQKADHEVVNIVDADGCSEQDKEVWLTLKV 128
Query: 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV 233
LRGH + Y LSW+ + L+SGS D LWD+++ KSL I H+G V+ V
Sbjct: 129 LRGHREDIYDLSWAPNSQ-FLVSGSVDNTAMLWDVHSG---KSLA---ILDDHKGYVQGV 181
Query: 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDT 292
AW ++Y+ ++ D+ + I+D T V V V E + S RL + T
Sbjct: 182 AWDPCNQYI-ATMSTDRQMRIFDANTKRVLHRVSKCVLPVKE-DHEMHGKSMRLYQDGT 238
>UNIPROTKB|E2R747 [details] [associations]
symbol:CORO2A "Coronin" species:9615 "Canis lupus
familiaris" [GO:0017053 "transcriptional repressor complex"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:LLQMFYR EMBL:AAEX03007981
Ensembl:ENSCAFT00000003912 NextBio:20856381 Uniprot:E2R747
Length = 603
Score = 130 (50.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 53/188 (28%), Positives = 79/188 (42%)
Query: 122 INHDGEVNRARYMPQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHST 179
I H + N + NP+ IA T S F H + G P ++ GH
Sbjct: 115 ITHSVQDNH--FCAVNPYFIAVVTECSCGGAFFVIPLHQT-----GKLDPHYPKVCGHKG 167
Query: 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLR 238
+ W+ F + + S S+D I +WDI K+L A + + H V V WH
Sbjct: 168 NVLDIKWNPFNDFEIASCSEDTTIKIWDIPKQLLTKNLTACKKELIGHTRRVGLVEWHPT 227
Query: 239 HEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVGVSILNASFRLSHEDTCT-C 295
+ S G D +++W+L T + PV+++ HQ GV IL+ SF + T C
Sbjct: 228 AANILFSSGYDYKVMVWNLDTKESVIMNPVRTIGCHQ---GV-ILSMSFNTNGSLLATTC 283
Query: 296 THRHSRYL 303
R R L
Sbjct: 284 KDRKIRIL 291
Score = 39 (18.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 42 WPSLTVE-----WLPDREEPPGKDYSV-QKMILGTHT 72
WPS TVE WL D G + + +LGT T
Sbjct: 15 WPSRTVESRVQGWL-DEGVAEGAVSGIGSRTLLGTKT 50
>UNIPROTKB|F1SSG3 [details] [associations]
symbol:CORO2A "Coronin" species:9823 "Sus scrofa"
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:LLQMFYR EMBL:CU302382 EMBL:CU074406
RefSeq:XP_003122082.1 UniGene:Ssc.90840 Ensembl:ENSSSCT00000005915
GeneID:100511910 KEGG:ssc:100511910 Uniprot:F1SSG3
Length = 525
Score = 127 (49.8 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +WDI K+L A + V H V V
Sbjct: 80 GHRGNVLDVKWNPFDDFEIASCSEDATIKIWDIPKQLMTKNLTACKKELVGHARRVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVGVSILNASFRLSHEDT 292
WH + S G D +++W+L T + PV+++ HQ +V IL+ SF +
Sbjct: 140 WHPTAANILFSSGYDYKVMVWNLDTKESVIMSPVRTITCHQ-DV---ILSMSFNTNGSLL 195
Query: 293 CT-CTHRHSRYL 303
T C R R L
Sbjct: 196 ATACKDRKIRVL 207
>RGD|1308483 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10116
"Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA;ISO] [GO:0001958 "endochondral ossification"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005053 "peroxisome matrix targeting signal-2 binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005782 "peroxisomal
matrix" evidence=IEA;ISO] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA;ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0008611 "ether lipid
biosynthetic process" evidence=IEA;ISO] [GO:0016558 "protein import
into peroxisome matrix" evidence=IEA;ISO] [GO:0019899 "enzyme
binding" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IEA;ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 RGD:1308483 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 GeneTree:ENSGT00700000104578
OrthoDB:EOG483D4V EMBL:BC100091 IPI:IPI00367874
RefSeq:NP_001029319.1 UniGene:Rn.162402 STRING:Q498S5
Ensembl:ENSRNOT00000016728 GeneID:308718 KEGG:rno:308718
UCSC:RGD:1308483 InParanoid:Q498S5 NextBio:659419
Genevestigator:Q498S5 Uniprot:Q498S5
Length = 318
Score = 122 (48.0 bits), Expect = 5.4e-05, P = 5.4e-05
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 177 HSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ ++ L+ SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRDEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
F S DQ L IWD++T V + V + AHQ+E+
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTTGV-RIV--IPAHQAEI 196
>UNIPROTKB|E2QYX6 [details] [associations]
symbol:PEX7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008611 "ether lipid biosynthetic process" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005782 "peroxisomal matrix"
evidence=IEA] [GO:0005053 "peroxisome matrix targeting signal-2
binding" evidence=IEA] [GO:0001958 "endochondral ossification"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782 GO:GO:0008611
GO:GO:0016558 GO:GO:0001958 KO:K13341 OMA:GHEYAVR CTD:5191
GO:GO:0005053 GeneTree:ENSGT00700000104578 EMBL:AAEX03000193
RefSeq:XP_541117.2 Ensembl:ENSCAFT00000000399 GeneID:484000
KEGG:cfa:484000 NextBio:20858274 Uniprot:E2QYX6
Length = 323
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/101 (35%), Positives = 51/101 (50%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + LWD KSL F+ HE V+ W
Sbjct: 110 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRGHESVIYSTIW 163
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
F S DQ L IWD+++ V + V V AHQ+E+
Sbjct: 164 SPHIPGCFASASGDQTLRIWDVKSTGV-RIV--VPAHQAEI 201
>UNIPROTKB|B4E039 [details] [associations]
symbol:DCAF7 "DDB1- and CUL4-associated factor 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 EMBL:AC113554
UniGene:Hs.410596 HGNC:HGNC:30915 EMBL:AK303212 IPI:IPI00908632
SMR:B4E039 STRING:B4E039 Ensembl:ENST00000415273 UCSC:uc010wpn.2
HOGENOM:HOG000200527 Uniprot:B4E039
Length = 142
Score = 103 (41.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 168 CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227
C+P RL H G++W+ H+ + +DD Q +WDI P+ ++E + E
Sbjct: 56 CTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMPR--AIEDPILAYTAE 113
Query: 228 GVVEDVAW 235
G + +V W
Sbjct: 114 GEINNVQW 121
>UNIPROTKB|B4DRT0 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 UniGene:Hs.16003
HGNC:HGNC:9887 ChiTaRS:RBBP4 EMBL:AK299410 IPI:IPI00983362
SMR:B4DRT0 STRING:B4DRT0 Ensembl:ENST00000544435 UCSC:uc010ohj.2
HOVERGEN:HBG103193 Uniprot:B4DRT0
Length = 173
Score = 112 (44.5 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + H+ E LS++ + E L +GS D + LWD+ +N L+ + F+ H+
Sbjct: 13 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLK-LHSFESHKDE 67
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
+ V W +E + S G D+ L +WDL
Sbjct: 68 IFQVQWSPHNETILASSGTDRRLNVWDL 95
Score = 106 (42.4 bits), Expect = 0.00060, P = 0.00060
Identities = 32/142 (22%), Positives = 60/142 (42%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H EVN + P + F++AT + V ++D K L H E +
Sbjct: 20 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHS-------FESHKDEIFQ 70
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-----IFKVHEG---VVEDVAW 235
+ WS E L S D ++ +WD++ + +S E + + +H G + D +W
Sbjct: 71 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 130
Query: 236 HLRHEYLFGSVGDDQYLLIWDL 257
+ ++ SV +D + +W +
Sbjct: 131 NPNEPWVICSVSEDNIMQVWQM 152
>UNIPROTKB|O00628 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:9606 "Homo sapiens" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0001958 "endochondral ossification" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=IEA] [GO:0008611
"ether lipid biosynthetic process" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=IDA]
[GO:0016558 "protein import into peroxisome matrix"
evidence=IDA;IMP] [GO:0007031 "peroxisome organization"
evidence=IMP] [GO:0005777 "peroxisome" evidence=IDA] [GO:0019899
"enzyme binding" evidence=IPI] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0005782 "peroxisomal
matrix" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 GO:GO:0001764 GO:GO:0042803 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006635 GO:GO:0005782
GO:GO:0008611 Orphanet:177 GO:GO:0016558 GO:GO:0001958 Orphanet:773
TCDB:3.A.20.1.1 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U88871 EMBL:U76560
EMBL:AF180814 EMBL:AF180806 EMBL:AF180807 EMBL:AF180808
EMBL:AF180809 EMBL:AF180810 EMBL:AF180811 EMBL:AF180812
EMBL:AF180813 EMBL:BC006268 IPI:IPI00012577 RefSeq:NP_000279.1
UniGene:Hs.280932 ProteinModelPortal:O00628 SMR:O00628
IntAct:O00628 STRING:O00628 PhosphoSite:O00628 PRIDE:O00628
DNASU:5191 Ensembl:ENST00000318471 GeneID:5191 KEGG:hsa:5191
UCSC:uc003qhd.3 GeneCards:GC06P137185 HGNC:HGNC:8860 HPA:HPA049202
MIM:215100 MIM:601757 MIM:614879 neXtProt:NX_O00628
PharmGKB:PA33202 InParanoid:O00628 PhylomeDB:O00628 GenomeRNAi:5191
NextBio:20076 ArrayExpress:O00628 Bgee:O00628 CleanEx:HS_PEX7
Genevestigator:O00628 GermOnline:ENSG00000112357 Uniprot:O00628
Length = 323
Score = 120 (47.3 bits), Expect = 9.5e-05, P = 9.5e-05
Identities = 36/111 (32%), Positives = 53/111 (47%)
Query: 167 ACSPDLRLRGHSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV 225
A P + H+ E Y + WS+ + E ++SGS D + LWD KSL F+
Sbjct: 100 AAGPLQVYKEHAQEVYSVDWSQTRGEQLVVSGSWDQTVKLWDPTVG---KSLCT---FRG 153
Query: 226 HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
HE ++ W F S DQ L IWD++ V + V + AHQ+E+
Sbjct: 154 HESIIYSTIWSPHIPGCFASASGDQTLRIWDVKAAGV-RIV--IPAHQAEI 201
>DICTYBASE|DDB_G0279801 [details] [associations]
symbol:pex7 "peroxisomal biogenesis factor 7"
species:44689 "Dictyostelium discoideum" [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA;ISS] [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=IEA;ISS] [GO:0007031
"peroxisome organization" evidence=ISS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 InterPro:IPR025651
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0279801 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
GenomeReviews:CM000152_GR eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007031 GO:GO:0016558 EMBL:AAFI02000033
HSSP:P46680 KO:K13341 OMA:GHEYAVR GO:GO:0005053 RefSeq:XP_641489.1
ProteinModelPortal:Q54WA3 STRING:Q54WA3 EnsemblProtists:DDB0233068
GeneID:8622229 KEGG:ddi:DDB_G0279801 InParanoid:Q54WA3
ProtClustDB:CLSZ2729075 PANTHER:PTHR22850:SF4 Uniprot:Q54WA3
Length = 316
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 29/101 (28%), Positives = 52/101 (51%)
Query: 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + W+ + ++GS D I +W+ P+ ++SL+ F+ H + W
Sbjct: 103 HTKEVYSVDWNLVTKDTFITGSWDQSIKIWN----PRMDRSLKT---FREHRYCIYSAIW 155
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
R+ +LF SV D+ L IWD R ++ + ++ AH E+
Sbjct: 156 SPRNAHLFASVSGDRTLKIWDSRD---NRSLNTIKAHDHEI 193
>UNIPROTKB|Q8R537 [details] [associations]
symbol:PEX7 "Peroxisomal targeting signal 2 receptor"
species:10029 "Cricetulus griseus" [GO:0005053 "peroxisome matrix
targeting signal-2 binding" evidence=ISS] [GO:0008611 "ether lipid
biosynthetic process" evidence=ISS] [GO:0016558 "protein import
into peroxisome matrix" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005777 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0008611 GO:GO:0016558
EMBL:AB042621 RefSeq:NP_001231782.1 ProteinModelPortal:Q8R537
GeneID:100736556 CTD:5191 HOVERGEN:HBG003354 GO:GO:0005053
Uniprot:Q8R537
Length = 318
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
F S DQ L IWD++T V + V + AHQ+E+
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTAGV-RIV--IPAHQTEI 196
>MGI|MGI:1321392 [details] [associations]
symbol:Pex7 "peroxisomal biogenesis factor 7" species:10090
"Mus musculus" [GO:0001764 "neuron migration" evidence=IMP]
[GO:0001958 "endochondral ossification" evidence=IMP] [GO:0005053
"peroxisome matrix targeting signal-2 binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005782 "peroxisomal matrix" evidence=ISO]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006625 "protein
targeting to peroxisome" evidence=IMP] [GO:0006635 "fatty acid
beta-oxidation" evidence=IMP] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008611
"ether lipid biosynthetic process" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0016558 "protein import into
peroxisome matrix" evidence=ISO;IMP] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 MGI:MGI:1321392 GO:GO:0005829 GO:GO:0001764
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0006635 GO:GO:0005782 GO:GO:0008611 GO:GO:0016558
GO:GO:0001958 HOGENOM:HOG000204332 KO:K13341 OMA:GHEYAVR CTD:5191
HOVERGEN:HBG003354 GO:GO:0005053 EMBL:U69171 EMBL:BC132213
EMBL:BC132503 IPI:IPI00130134 RefSeq:NP_032848.1 UniGene:Mm.338363
ProteinModelPortal:P97865 SMR:P97865 STRING:P97865
PhosphoSite:P97865 PaxDb:P97865 PRIDE:P97865
Ensembl:ENSMUST00000020182 GeneID:18634 KEGG:mmu:18634
UCSC:uc007enl.2 GeneTree:ENSGT00700000104578 InParanoid:A2RSR2
OrthoDB:EOG483D4V NextBio:294604 Bgee:P97865 CleanEx:MM_PEX7
Genevestigator:P97865 GermOnline:ENSMUSG00000020003 Uniprot:P97865
Length = 318
Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
Identities = 32/101 (31%), Positives = 50/101 (49%)
Query: 177 HSTEGYGLSWSKFK-EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235
H+ E Y + WS+ + E ++SGS D + +WD ++ F+ HE V+ W
Sbjct: 105 HTQEVYSVDWSQTRGEQLVVSGSWDQTVKVWDPTVG------NSLCTFRGHESVIYSTIW 158
Query: 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
F S DQ L IWD++T V + V + AHQ+E+
Sbjct: 159 SPHIPGCFASASGDQTLRIWDVKTTGV-RIV--IPAHQTEI 196
>UNIPROTKB|H0YCT5 [details] [associations]
symbol:RBBP4 "Histone-binding protein RBBP4" species:9606
"Homo sapiens" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0035098
"ESC/E(Z) complex" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016581 EMBL:AC114489 HGNC:HGNC:9887
ChiTaRS:RBBP4 PRIDE:H0YCT5 Ensembl:ENST00000460669 Bgee:H0YCT5
Uniprot:H0YCT5
Length = 180
Score = 112 (44.5 bits), Expect = 0.00013, P = 0.00013
Identities = 27/88 (30%), Positives = 45/88 (51%)
Query: 170 PDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV 229
P + H+ E LS++ + E L +GS D + LWD+ +N L+ + F+ H+
Sbjct: 20 PSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDL----RNLKLK-LHSFESHKDE 74
Query: 230 VEDVAWHLRHEYLFGSVGDDQYLLIWDL 257
+ V W +E + S G D+ L +WDL
Sbjct: 75 IFQVQWSPHNETILASSGTDRRLNVWDL 102
Score = 106 (42.4 bits), Expect = 0.00074, P = 0.00074
Identities = 32/142 (22%), Positives = 60/142 (42%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H EVN + P + F++AT + V ++D K L H E +
Sbjct: 27 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLK--LHS-------FESHKDEIFQ 77
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-----IFKVHEG---VVEDVAW 235
+ WS E L S D ++ +WD++ + +S E + + +H G + D +W
Sbjct: 78 VQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGHTAKISDFSW 137
Query: 236 HLRHEYLFGSVGDDQYLLIWDL 257
+ ++ SV +D + +W +
Sbjct: 138 NPNEPWVICSVSEDNIMQVWQM 159
>UNIPROTKB|Q32LP9 [details] [associations]
symbol:CORO2A "Coronin-2A" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=ISS] [GO:0030036
"actin cytoskeleton organization" evidence=ISS] [GO:0017053
"transcriptional repressor complex" evidence=ISS] [GO:0015629
"actin cytoskeleton" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0017053 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
HSSP:O89053 EMBL:BC109477 IPI:IPI00696103 RefSeq:NP_001033309.1
UniGene:Bt.28800 ProteinModelPortal:Q32LP9 PRIDE:Q32LP9
Ensembl:ENSBTAT00000016014 GeneID:617620 KEGG:bta:617620 CTD:7464
InParanoid:Q32LP9 OMA:LLQMFYR OrthoDB:EOG4GXFMG NextBio:20900762
Uniprot:Q32LP9
Length = 525
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 40/132 (30%), Positives = 61/132 (46%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVA 234
GH + W+ F + + S S+DA I +WDI K+L A + V H V V
Sbjct: 80 GHRGNVLDVKWNPFNDFEIASCSEDATIKIWDIPKQLLTKNLTAFRKELVGHARKVGLVE 139
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVGVSILNASFRLSHEDT 292
WH + S G D +++W+L + + PV+++ HQ +V IL+ SF +
Sbjct: 140 WHPTAANILFSSGYDYKVMVWNLDSKESVIMSPVKTINCHQ-DV---ILSMSFNTNGSLL 195
Query: 293 CT-CTHRHSRYL 303
T C R R L
Sbjct: 196 ATACKDRKIRVL 207
>SGD|S000002304 [details] [associations]
symbol:COP1 "Alpha subunit of COPI vesicle coatomer complex"
species:4932 "Saccharomyces cerevisiae" [GO:0030126 "COPI vesicle
coat" evidence=IEA;ISS;IMP] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IMP] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030117
"membrane coat" evidence=IEA] [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0030663 "COPI-coated vesicle membrane"
evidence=IEA] [GO:0043130 "ubiquitin binding" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006692
InterPro:IPR010714 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04053
Pfam:PF06957 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
SGD:S000002304 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0005198 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 EMBL:BK006938 GO:GO:0006888
GO:GO:0030126 GO:GO:0006890 GO:GO:0043130 EMBL:X97751
HOGENOM:HOG000195913 KO:K05236 InterPro:IPR016391 PIRSF:PIRSF003354
GeneTree:ENSGT00600000084501 OrthoDB:EOG40VZXP EMBL:Z46617
EMBL:X83754 EMBL:Z74193 EMBL:Z74192 PIR:S67692 RefSeq:NP_010136.1
PDB:3MKQ PDB:3MV2 PDB:3MV3 PDBsum:3MKQ PDBsum:3MV2 PDBsum:3MV3
ProteinModelPortal:P53622 SMR:P53622 DIP:DIP-2582N IntAct:P53622
MINT:MINT-422687 STRING:P53622 PaxDb:P53622 PeptideAtlas:P53622
EnsemblFungi:YDL145C GeneID:851410 KEGG:sce:YDL145C CYGD:YDL145c
OMA:YDQHNPF EvolutionaryTrace:P53622 NextBio:968591
Genevestigator:P53622 GermOnline:YDL145C Uniprot:P53622
Length = 1201
Score = 126 (49.4 bits), Expect = 0.00013, P = 0.00013
Identities = 36/99 (36%), Positives = 54/99 (54%)
Query: 166 GACSPDLRLRGHSTEGYGLSWSKFKEGH--LLSGSDDAQICLWDINAAPKNKSLEAMQIF 223
G C L GH+ G++W+ F ++SGSDD Q+ LW ++A K+ E +
Sbjct: 197 GDCVVKFILEGHTR---GVNWASFHPTLPLIVSGSDDRQVKLWRMSAT---KAWE-VDTC 249
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDL--RTP 260
+ H V+ V +H H+ L SVG+D+ L +WDL RTP
Sbjct: 250 RGHTNNVDSVIFH-PHQNLIISVGEDKTLRVWDLDKRTP 287
>RGD|708560 [details] [associations]
symbol:Coro6 "coronin 6" species:10116 "Rattus norvegicus"
[GO:0015629 "actin cytoskeleton" evidence=IBA] [GO:0030036 "actin
cytoskeleton organization" evidence=IBA] [GO:0051015 "actin
filament binding" evidence=IBA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 RGD:708560 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015
GeneTree:ENSGT00550000074317 HOGENOM:HOG000166356
HOVERGEN:HBG059978 OrthoDB:EOG4RNB8C InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:84940 OMA:PFYDADS EMBL:AF140359
EMBL:BC098656 IPI:IPI00200600 RefSeq:NP_620815.2 UniGene:Rn.28432
ProteinModelPortal:Q920J3 SMR:Q920J3 PhosphoSite:Q920J3
PRIDE:Q920J3 Ensembl:ENSRNOT00000019759 GeneID:245982
KEGG:rno:245982 InParanoid:Q920J3 NextBio:623280
ArrayExpress:Q920J3 Genevestigator:Q920J3
GermOnline:ENSRNOG00000014496 Uniprot:Q920J3
Length = 472
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 50/181 (27%), Positives = 70/181 (38%)
Query: 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYG 183
H G V + P N +IA+ + V V+ P P+ P + L GHS
Sbjct: 80 HTGPVLDIDWCPHNDNVIASASDDTTVMVWQI---PDYTPVRNITEPVITLEGHSKRVGI 136
Query: 184 LSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243
LSW LLS D I +W++ SL+ +H V+ V W+ L
Sbjct: 137 LSWHPTARNVLLSAGGDNVIIIWNVGTGEVLLSLD-----DIHPDVIHSVCWNSNGS-LL 190
Query: 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASF-RLSHEDTCTCTHRHSRY 302
+ D+ L I D R V + AH+ G+ + A F RL H T T R
Sbjct: 191 ATTCKDKTLRIIDPRKSQVV--AERFAAHE---GMRPMRAVFTRLGHIFTTGFTRMSQRE 245
Query: 303 L 303
L
Sbjct: 246 L 246
>UNIPROTKB|G5E5F8 [details] [associations]
symbol:CORO2B "Coronin" species:9913 "Bos taurus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:REHCFDG EMBL:DAAA02027932
EMBL:DAAA02027933 EMBL:DAAA02027934 EMBL:DAAA02027935
EMBL:DAAA02027936 Ensembl:ENSBTAT00000016845 Uniprot:G5E5F8
Length = 443
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I K E
Sbjct: 69 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTE 128
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L V +PV+ + H S+V
Sbjct: 129 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DVGEPVKMIDCH-SDV-- 182
Query: 279 SILNASFRLSHED-TCTCTHRHSRYL 303
IL SF T TC + R +
Sbjct: 183 -ILCMSFNTDGSLLTTTCKDKKLRVI 207
>UNIPROTKB|E2REL6 [details] [associations]
symbol:CORO2B "Coronin" species:9615 "Canis lupus
familiaris" [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 CTD:10391 OMA:REHCFDG
EMBL:AAEX03016248 RefSeq:XP_544743.3 Ensembl:ENSCAFT00000027724
GeneID:487618 KEGG:cfa:487618 Uniprot:E2REL6
Length = 475
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I K E
Sbjct: 64 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTE 123
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L V +PV+ + H S+V
Sbjct: 124 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DVGEPVKMIDCH-SDV-- 177
Query: 279 SILNASFRLSHED-TCTCTHRHSRYL 303
IL SF T TC + R +
Sbjct: 178 -ILCMSFNTDGSLLTTTCKDKKLRVI 202
>MGI|MGI:1314881 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0031497
"chromatin assembly" evidence=ISO] [GO:0033186 "CAF-1 complex"
evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 InterPro:IPR001632 MGI:MGI:1314881 GO:GO:0005829
GO:GO:0005813 GO:GO:0005654 GO:GO:0006355 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006260
GO:GO:0006281 eggNOG:COG2319 GO:GO:0006351 GO:GO:0007049
GO:GO:0031497 GO:GO:0033186 GeneTree:ENSGT00550000074968
HOGENOM:HOG000183312 KO:K10751 OMA:VYDICWT CTD:8208
OrthoDB:EOG4G4GQD PRINTS:PR00319 HOVERGEN:HBG050780 EMBL:AK011243
EMBL:BC013532 IPI:IPI00132770 RefSeq:NP_082359.1 UniGene:Mm.274222
ProteinModelPortal:Q9D0N7 SMR:Q9D0N7 STRING:Q9D0N7
PhosphoSite:Q9D0N7 PRIDE:Q9D0N7 Ensembl:ENSMUST00000023666
Ensembl:ENSMUST00000117099 GeneID:110749 KEGG:mmu:110749
UCSC:uc008aac.1 InParanoid:Q9D0N7 NextBio:364585 Bgee:Q9D0N7
CleanEx:MM_CHAF1B Genevestigator:Q9D0N7
GermOnline:ENSMUSG00000022945 Uniprot:Q9D0N7
Length = 572
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 32/120 (26%), Positives = 62/120 (51%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
LRGH + Y + W+ +G+L+ S S D + +WD++ K + IF H+ V+
Sbjct: 125 LRGHLEDVYDICWAT--DGNLMTSASVDNTVIIWDVSKGQK------ISIFNEHKSYVQG 176
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDT 292
V W +Y+ ++ D+ L I++ + V+ + +++ Q G + SFR+ H+D+
Sbjct: 177 VTWDPLGQYI-ATLSCDRVLRIYNTQKKRVAFNISKMLSGQGPEGEA---RSFRMFHDDS 232
>UNIPROTKB|F1SJH0 [details] [associations]
symbol:CORO2B "Coronin" species:9823 "Sus scrofa"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0030036
"actin cytoskeleton organization" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 OMA:REHCFDG EMBL:CU638841
Ensembl:ENSSSCT00000005474 Uniprot:F1SJH0
Length = 497
Score = 119 (46.9 bits), Expect = 0.00026, P = 0.00026
Identities = 42/146 (28%), Positives = 64/146 (43%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I K E
Sbjct: 64 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTE 123
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L V +PV+ + H S+V
Sbjct: 124 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DVGEPVKMIDCH-SDV-- 177
Query: 279 SILNASFRLSHED-TCTCTHRHSRYL 303
IL SF T TC + R +
Sbjct: 178 -ILCMSFNTDGSLLTTTCKDKKLRVI 202
>UNIPROTKB|B0W517 [details] [associations]
symbol:CPIJ001500 "Ribosome biogenesis protein WDR12
homolog" species:7176 "Culex quinquefasciatus" [GO:0000463
"maturation of LSU-rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0070545 GO:GO:0000463
InterPro:IPR012972 Pfam:PF08154 KO:K14863 HOGENOM:HOG000264464
HAMAP:MF_03029 EMBL:DS231840 RefSeq:XP_001843801.1
UniGene:Cpi.10498 ProteinModelPortal:B0W517 STRING:B0W517
GeneID:6033337 KEGG:cqu:CpipJ_CPIJ001500 VectorBase:CPIJ001500
Uniprot:B0W517
Length = 425
Score = 118 (46.6 bits), Expect = 0.00026, P = 0.00026
Identities = 35/113 (30%), Positives = 56/113 (49%)
Query: 171 DLRLRGHSTE--G----YGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIF 223
DL L G +E G + LS+SK G +++ S D + L+D PK N+ +
Sbjct: 287 DLALNGIKSEISGNKSFFDLSYSKLN-GLIITASPDKNLRLYD----PKSNQGTLVKNTY 341
Query: 224 KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276
H V+ V W +EYLF S D ++ +WD R+P P+ ++ H+ +V
Sbjct: 342 LGHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWDYRSPKA--PIFELIGHEDKV 392
>ASPGD|ASPL0000037495 [details] [associations]
symbol:cdhA species:162425 "Emericella nidulans"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008054 "cyclin catabolic
process" evidence=IMP] [GO:0005816 "spindle pole body"
evidence=IDA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0030996 "cell cycle arrest in response to nitrogen starvation"
evidence=IEA] [GO:0031137 "regulation of conjugation with cellular
fusion" evidence=IEA] [GO:0000750 "pheromone-dependent signal
transduction involved in conjugation with cellular fusion"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 EMBL:BN001306 EMBL:AACD01000051
HOGENOM:HOG000195514 KO:K03364 OrthoDB:EOG43FM5B OMA:PMATANL
RefSeq:XP_660569.1 ProteinModelPortal:Q5B915 STRING:Q5B915
EnsemblFungi:CADANIAT00010116 GeneID:2874026 KEGG:ani:AN2965.2
Uniprot:Q5B915
Length = 592
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 169 SPDL---RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD-INAAPKNKSLEAMQIFK 224
SPD RL GH E GL W+ ++G L SG +D ++ +WD +N P + F
Sbjct: 398 SPDQYLRRLSGHKQEVCGLRWNT-EDGQLASGGNDNKLLVWDKLNETPLYR-------FS 449
Query: 225 VHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282
H V+ + W +L S G D+ + W+ T S+ K V + G + N
Sbjct: 450 DHTAAVKAITWSPHQHHLLASGGGTADRTIKFWNTATGSLIKEV--------DTGSQVCN 501
Query: 283 ASFRLSHEDTCTCTHRHSR 301
++ + D TH +S+
Sbjct: 502 LAWS-KNSDEIISTHGYSQ 519
>FB|FBgn0262699 [details] [associations]
symbol:rap "retina aberrant in pattern" species:7227
"Drosophila melanogaster" [GO:0008054 "cyclin catabolic process"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0030163
"protein catabolic process" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0010458
"exit from mitosis" evidence=IMP] [GO:0000080 "G1 phase of mitotic
cell cycle" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0031536 "positive regulation of exit from
mitosis" evidence=IMP] [GO:0001745 "compound eye morphogenesis"
evidence=IMP] [GO:0007455 "eye-antennal disc morphogenesis"
evidence=IMP] [GO:0031145 "anaphase-promoting complex-dependent
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0005680 "anaphase-promoting complex"
evidence=IDA] [GO:0090302 "mitotic anaphase-promoting complex
activity" evidence=IDA] [GO:0005814 "centriole" evidence=IDA]
[GO:0010001 "glial cell differentiation" evidence=IDA] [GO:0030424
"axon" evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005819 InterPro:IPR019775 GO:GO:0030424
eggNOG:COG2319 GO:GO:0008054 GO:GO:0008347 GO:GO:0000080
GO:GO:0007455 GO:GO:0010001 GO:GO:0031536 GO:GO:0001745
HOGENOM:HOG000247776 ChiTaRS:R EMBL:Y14162
ProteinModelPortal:O18402 SMR:O18402 STRING:O18402 PRIDE:O18402
FlyBase:FBgn0262699 InParanoid:O18402 OrthoDB:EOG4C5B0M
ArrayExpress:O18402 Bgee:O18402 Uniprot:O18402
Length = 478
Score = 117 (46.2 bits), Expect = 0.00041, P = 0.00041
Identities = 36/131 (27%), Positives = 59/131 (45%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
RL GH E GL WS + +L SG +D ++ +W+ S+ +Q + H V+
Sbjct: 293 RLAGHRQEVCGLKWSPDNQ-YLASGGNDNRLYVWN------QHSVNPVQSYTEHMAAVKA 345
Query: 233 VAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHE 290
+AW H L S G D+ + W+ T +P+Q V + G + N ++ H
Sbjct: 346 IAWSPHHHGLLASGGGTADRCIRFWNTLT---GQPMQCV-----DTGSQVCNLAWS-KHS 396
Query: 291 DTCTCTHRHSR 301
TH +S+
Sbjct: 397 SELVSTHGYSQ 407
>POMBASE|SPBC8D2.20c [details] [associations]
symbol:sec31 "COPII-coated vesicle component Sec31
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IMP] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=IMP] [GO:0006998
"nuclear envelope organization" evidence=IMP] [GO:0030127 "COPII
vesicle coat" evidence=ISO] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 PomBase:SPBC8D2.20c GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0005789 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0006998 GO:GO:0006888 GO:GO:0030127
EMBL:AB004537 eggNOG:NOG248389 KO:K14005 InterPro:IPR009917
Pfam:PF07304 OMA:NQPPPMM OrthoDB:EOG4RR9RS PIR:T40765
RefSeq:NP_595582.1 ProteinModelPortal:O13637 STRING:O13637
EnsemblFungi:SPBC8D2.20c.1 GeneID:2541273 KEGG:spo:SPBC8D2.20c
NextBio:20802385 Uniprot:O13637
Length = 1224
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 41/142 (28%), Positives = 65/142 (45%)
Query: 138 PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-S 196
P L+A+ +V+V+D KHP +P L + S+E + +SW+ K H+L S
Sbjct: 130 PNLLASGDNKGDVWVWDI-KHPQQPFA-------LPKQNRSSEVHVVSWNN-KVSHILAS 180
Query: 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHE--GVVEDVAWHLRHEYLFGSVGDDQ---Y 251
G+ +WD+ + +L + V G V +AWH + + DD
Sbjct: 181 GNATEYTTVWDVKLKRQVLNLSYLGAAGVSAATGAVNSIAWHPNNATRLATAIDDNRNPI 240
Query: 252 LLIWDLRTPSVSKPVQSVVAHQ 273
+L WDLR P+V P + HQ
Sbjct: 241 ILTWDLRQPTV--PQNILTGHQ 260
>RGD|1307634 [details] [associations]
symbol:Chaf1b "chromatin assembly factor 1, subunit B (p60)"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005654 "nucleoplasm" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0031497 "chromatin
assembly" evidence=IEA;ISO] [GO:0033186 "CAF-1 complex"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 RGD:1307634 GO:GO:0005829 GO:GO:0005813
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0031497 GO:GO:0033186
GeneTree:ENSGT00550000074968 HOGENOM:HOG000183312 KO:K10751
OMA:VYDICWT CTD:8208 OrthoDB:EOG4G4GQD PRINTS:PR00319
HOVERGEN:HBG050780 EMBL:CH474083 EMBL:BC097460 IPI:IPI00370803
RefSeq:NP_001019912.1 UniGene:Rn.159953 STRING:Q4V8B4
Ensembl:ENSRNOT00000002299 GeneID:288242 KEGG:rno:288242
UCSC:RGD:1307634 InParanoid:Q4V8B4 NextBio:627840
Genevestigator:Q4V8B4 Uniprot:Q4V8B4
Length = 572
Score = 117 (46.2 bits), Expect = 0.00053, P = 0.00053
Identities = 31/120 (25%), Positives = 61/120 (50%)
Query: 174 LRGHSTEGYGLSWSKFKEGHLL-SGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
LRGH + Y + W+ +G+++ S S D + +WD++ K + IF H+ V+
Sbjct: 125 LRGHLEDVYDICWAT--DGNMMASASVDNTVIIWDVSKGQK------ISIFNEHKSYVQG 176
Query: 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDT 292
V W +Y+ ++ D+ L ++ + V+ V +++ Q G + SFR+ H+D+
Sbjct: 177 VTWDPLGQYI-ATLSCDRVLRVYSTQKKRVAFNVSKMLSGQGPEGEA---RSFRMFHDDS 232
>UNIPROTKB|Q9UQ03 [details] [associations]
symbol:CORO2B "Coronin-2B" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003779 "actin binding"
evidence=NAS] [GO:0015629 "actin cytoskeleton" evidence=IBA;NAS]
[GO:0030036 "actin cytoskeleton organization" evidence=NAS;IBA]
[GO:0051015 "actin filament binding" evidence=IBA] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005737 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036
GO:GO:0015629 eggNOG:COG2319 GO:GO:0051015 HOGENOM:HOG000166356
HOVERGEN:HBG059978 InterPro:IPR015505 InterPro:IPR015048
InterPro:IPR015049 PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954
EMBL:AB010098 EMBL:AK289678 EMBL:AC090734 EMBL:AC105014
EMBL:BC026335 EMBL:AB023142 IPI:IPI00298912 IPI:IPI00940363
RefSeq:NP_001177385.1 RefSeq:NP_001177386.1 RefSeq:NP_006082.3
UniGene:Hs.551213 ProteinModelPortal:Q9UQ03 SMR:Q9UQ03
IntAct:Q9UQ03 MINT:MINT-1394971 STRING:Q9UQ03 PhosphoSite:Q9UQ03
DMDM:254763439 PaxDb:Q9UQ03 PRIDE:Q9UQ03 DNASU:10391
Ensembl:ENST00000261861 Ensembl:ENST00000540068
Ensembl:ENST00000543950 Ensembl:ENST00000566799 GeneID:10391
KEGG:hsa:10391 UCSC:uc002arj.4 CTD:10391 GeneCards:GC15P068871
HGNC:HGNC:2256 HPA:HPA017960 MIM:605002 neXtProt:NX_Q9UQ03
PharmGKB:PA26772 InParanoid:Q9UQ03 OMA:REHCFDG OrthoDB:EOG45QHD0
ChiTaRS:CORO2B GenomeRNAi:10391 NextBio:39366 ArrayExpress:Q9UQ03
Bgee:Q9UQ03 CleanEx:HS_CORO2B Genevestigator:Q9UQ03
GermOnline:ENSG00000103647 Uniprot:Q9UQ03
Length = 480
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 38/145 (26%), Positives = 60/145 (41%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I K E
Sbjct: 69 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTE 128
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L V +PV+ + H +
Sbjct: 129 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DVGEPVKMIDCHTDVILC 185
Query: 279 SILNASFRLSHEDTCTCTHRHSRYL 303
N L T TC + R +
Sbjct: 186 MSFNTDGSLL---TTTCKDKKLRVI 207
>MGI|MGI:2444283 [details] [associations]
symbol:Coro2b "coronin, actin binding protein, 2B"
species:10090 "Mus musculus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:2444283 GO:GO:0005737 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
eggNOG:COG2319 GO:GO:0051015 GeneTree:ENSGT00550000074317
HOGENOM:HOG000166356 HOVERGEN:HBG059978 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:10391 OMA:REHCFDG OrthoDB:EOG45QHD0
EMBL:AK047527 EMBL:AK087414 EMBL:BC062649 IPI:IPI00221725
RefSeq:NP_780693.2 UniGene:Mm.335229 ProteinModelPortal:Q8BH44
SMR:Q8BH44 PhosphoSite:Q8BH44 PaxDb:Q8BH44 PRIDE:Q8BH44
Ensembl:ENSMUST00000048043 GeneID:235431 KEGG:mmu:235431
UCSC:uc009qaj.1 InParanoid:Q8BH44 NextBio:382660 Bgee:Q8BH44
CleanEx:MM_CORO2B Genevestigator:Q8BH44
GermOnline:ENSMUSG00000041729 Uniprot:Q8BH44
Length = 480
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 37/145 (25%), Positives = 61/145 (42%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I + K E
Sbjct: 69 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPDGGLKRNMTE 128
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L + +PV+ + H +
Sbjct: 129 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DIGEPVKMIDCHTDVILC 185
Query: 279 SILNASFRLSHEDTCTCTHRHSRYL 303
N L T TC + R +
Sbjct: 186 MSFNTDGSLL---TTTCKDKKLRVI 207
>WB|WBGene00001510 [details] [associations]
symbol:fzr-1 species:6239 "Caenorhabditis elegans"
[GO:0018991 "oviposition" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0007126 "meiosis" evidence=IMP] [GO:0007067 "mitosis"
evidence=IMP] [GO:0007276 "gamete generation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0009792 GO:GO:0007126 GO:GO:0018991 GO:GO:0007067
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR024977 Pfam:PF12894
GO:GO:0007276 EMBL:Z47358 KO:K03364 GeneTree:ENSGT00580000081606
PIR:T27730 RefSeq:NP_496075.1 ProteinModelPortal:Q09649 SMR:Q09649
STRING:Q09649 PaxDb:Q09649 EnsemblMetazoa:ZK1307.6 GeneID:174516
KEGG:cel:CELE_ZK1307.6 UCSC:ZK1307.6 CTD:174516 WormBase:ZK1307.6
InParanoid:Q09649 OMA:QIWDVTT NextBio:884360 Uniprot:Q09649
Length = 702
Score = 118 (46.6 bits), Expect = 0.00054, P = 0.00054
Identities = 38/130 (29%), Positives = 60/130 (46%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232
+L H E GL WS K+ L SG +D Q+ +W++ +N E +Q + H V+
Sbjct: 517 KLTNHRQEVCGLKWSPDKQ-LLASGGNDNQLLVWNLR---RN---EPIQTYTQHNAAVKA 569
Query: 233 VAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHE 290
+AW H L S G D+ L W+ T ++P+Q V + G + N ++ H
Sbjct: 570 LAWSPHHHGLLVSGGGTADRCLRFWNTLT---AQPMQCV-----DTGSQVCNVAWS-KHS 620
Query: 291 DTCTCTHRHS 300
TH +S
Sbjct: 621 SELVSTHGYS 630
>UNIPROTKB|E1BWN6 [details] [associations]
symbol:CORO2A "Coronin" species:9031 "Gallus gallus"
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0017053
"transcriptional repressor complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0017053 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 CTD:7464 OMA:LLQMFYR EMBL:AADN02060086
EMBL:AADN02060087 IPI:IPI00680995 RefSeq:XP_424946.3
UniGene:Gga.52392 Ensembl:ENSGALT00000002987 GeneID:427373
KEGG:gga:427373 Uniprot:E1BWN6
Length = 522
Score = 116 (45.9 bits), Expect = 0.00060, P = 0.00060
Identities = 33/109 (30%), Positives = 54/109 (49%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI--NAAPKNKSLEAMQIFKVHEGVV 230
R+ GH + W+ F + + S S+DA + +WDI + KN + ++ H V
Sbjct: 77 RICGHKGNVLDIKWNPFNDFVIASCSEDATVKIWDIPKHLLTKNITTPKKELLG-HARRV 135
Query: 231 EDVAWH-LRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEV 276
+ WH + LF S G D ++IW+L T +S PV+ + AH+ V
Sbjct: 136 GLIEWHPTANNILFSS-GHDYKIMIWNLDTREDVLSNPVKILDAHKDVV 183
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 113 (44.8 bits), Expect = 0.00061, P = 0.00061
Identities = 35/147 (23%), Positives = 71/147 (48%)
Query: 152 VFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211
V++ + +P+ + +CS D +R SW+ K GH L GS D C+W+ N A
Sbjct: 23 VWNVAWNPAADGVIASCSADKTVRIWEQSSLTRSWT-CKLGHRL-GSFDGNTCVWE-NFA 79
Query: 212 PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK--PVQSV 269
+ E++ + + HE V+ V+W+ L + G D+ + IW+++ + + +
Sbjct: 80 TDS---ESVSVLRGHESEVKSVSWNASGS-LLATCGRDKSVWIWEIQPEEDDEFDTIAVL 135
Query: 270 VAHQSEVGVSI----LNASFRLSHEDT 292
H +V + + ++ F S+++T
Sbjct: 136 TGHSEDVKMVLWHPTMDVLFSCSYDNT 162
>ZFIN|ZDB-GENE-030131-2258 [details] [associations]
symbol:coro2a "coronin, actin binding protein, 2A"
species:7955 "Danio rerio" [GO:0015629 "actin cytoskeleton"
evidence=IBA] [GO:0030036 "actin cytoskeleton organization"
evidence=IBA] [GO:0051015 "actin filament binding" evidence=IBA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-2258 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GO:GO:0030036 GO:GO:0015629
GO:GO:0051015 GeneTree:ENSGT00550000074317 InterPro:IPR015505
InterPro:IPR015048 InterPro:IPR015049 PANTHER:PTHR10856
Pfam:PF08953 Pfam:PF08954 EMBL:BX005000 EMBL:AL954695
IPI:IPI00972377 Ensembl:ENSDART00000011645 ArrayExpress:F1QR96
Bgee:F1QR96 Uniprot:F1QR96
Length = 533
Score = 116 (45.9 bits), Expect = 0.00061, P = 0.00061
Identities = 34/138 (24%), Positives = 63/138 (45%)
Query: 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI----FKVHEG 228
++ GH + W+ F + + S S+DA + +W+I P++ L+ + + + H
Sbjct: 82 KVSGHRGNVLDIKWNHFNDFCIASCSEDATVKIWEI---PEHGVLKTITVPWKELQGHSR 138
Query: 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS--VSKPVQSVVAHQSEVGVSILNASFR 286
V + WH + S G D +++W L P + PV+S+ H S+V +L+ SF
Sbjct: 139 RVGLIEWHPTANNIIFSTGYDYQVMVWKLDVPEQVIKNPVRSISVH-SDV---VLSMSFN 194
Query: 287 LSHEDTCT-CTHRHSRYL 303
T C + R +
Sbjct: 195 TDGSKLATSCKDKKIRVI 212
>UNIPROTKB|F1LMV9 [details] [associations]
symbol:Coro2b "Coronin" species:10116 "Rattus norvegicus"
[GO:0016020 "membrane" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 GeneTree:ENSGT00550000074317
InterPro:IPR015505 InterPro:IPR015048 InterPro:IPR015049
PANTHER:PTHR10856 Pfam:PF08953 Pfam:PF08954 IPI:IPI00373332
Ensembl:ENSRNOT00000020951 RGD:1561953 ArrayExpress:F1LMV9
Uniprot:F1LMV9
Length = 480
Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00069
Identities = 37/145 (25%), Positives = 60/145 (41%)
Query: 163 PLD--GACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDI-NAAPKNKSLE 218
PL+ G P+ ++ GH + W+ F + + S S+D + +W+I K E
Sbjct: 69 PLEQTGRIEPNYPKVCGHQGNVLDIKWNPFIDNIIASCSEDTSVRIWEIPEGGLKRNMTE 128
Query: 219 AMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278
A+ H V V WH + S G D +LIW+L + +PV+ + H +
Sbjct: 129 ALLELHGHSRRVGLVEWHPTTNNILFSAGYDYKVLIWNL---DIGEPVKMIDCHTDVILC 185
Query: 279 SILNASFRLSHEDTCTCTHRHSRYL 303
N L T TC + R +
Sbjct: 186 MSFNTDGSLL---TTTCKDKKLRVI 207
>UNIPROTKB|Q17BB0 [details] [associations]
symbol:AAEL005041 "Ribosome biogenesis protein WDR12
homolog" species:7159 "Aedes aegypti" [GO:0000463 "maturation of
LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=ISS] [GO:0070545 "PeBoW complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005654 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0070545 GO:GO:0000463 InterPro:IPR012972 Pfam:PF08154
KO:K14863 EMBL:CH477324 RefSeq:XP_001650205.1
ProteinModelPortal:Q17BB0 STRING:Q17BB0
EnsemblMetazoa:AAEL005041-RA GeneID:5565845
KEGG:aag:AaeL_AAEL005041 VectorBase:AAEL005041 HOGENOM:HOG000264464
OMA:LQTRFFT OrthoDB:EOG4BNZTB PhylomeDB:Q17BB0 HAMAP:MF_03029
Uniprot:Q17BB0
Length = 427
Score = 114 (45.2 bits), Expect = 0.00074, P = 0.00074
Identities = 34/115 (29%), Positives = 55/115 (47%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-NKSLEAMQIFKVHEGVVEDVA 234
GH + + LS+S G +++ S D + L+D PK N+ + H V+ V
Sbjct: 301 GHKSF-FDLSYSHLN-GLIIAASPDKNLRLYD----PKSNQGTIVKNTYLGHTQWVQSVR 354
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV-GVSILNASFRLS 288
W +EYLF S D ++ +WD R+P P+ ++ H+ +V N F LS
Sbjct: 355 WSTTNEYLFVSGAYDNHVKLWDYRSPKA--PIFELIGHEDKVLACDWSNPKFILS 407
>UNIPROTKB|H3BU76 [details] [associations]
symbol:CORO1A "Coronin" species:9606 "Homo sapiens"
[GO:0005884 "actin filament" evidence=IEA] [GO:0001772
"immunological synapse" evidence=IEA] [GO:0006816 "calcium ion
transport" evidence=IEA] [GO:0007015 "actin filament organization"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0030595 "leukocyte chemotaxis" evidence=IEA] [GO:0030833
"regulation of actin filament polymerization" evidence=IEA]
[GO:0031252 "cell leading edge" evidence=IEA] [GO:0032796 "uropod
organization" evidence=IEA] [GO:0034097 "response to cytokine
stimulus" evidence=IEA] [GO:0042102 "positive regulation of T cell
proliferation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0043029 "T cell homeostasis"
evidence=IEA] [GO:0048873 "homeostasis of number of cells within a
tissue" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0031252 GO:GO:0007015 Gene3D:2.130.10.10
PROSITE:PS00678 GO:GO:0008360 InterPro:IPR019775 GO:GO:0015629
GO:GO:0034097 GO:GO:0006816 GO:GO:0030335 GO:GO:0048873
GO:GO:0042102 GO:GO:0043029 GO:GO:0030833 GO:GO:0001772
GO:GO:0030595 GO:GO:0032796 InterPro:IPR015505 InterPro:IPR015048
PANTHER:PTHR10856 Pfam:PF08953 HGNC:HGNC:2252 EMBL:AC012645
Ensembl:ENST00000569970 Bgee:H3BU76 Uniprot:H3BU76
Length = 165
Score = 104 (41.7 bits), Expect = 0.00082, P = 0.00082
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSL-EAMQIFKVHEGVVEDVA 234
GH+ ++W + + SGS+D + +W+I L E + + H V VA
Sbjct: 79 GHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLMLPLREPVVTLEGHTKRVGIVA 138
Query: 235 WHLRHEYLFGSVGDDQYLLIWDLRT 259
WH + + S G D +++WD+ T
Sbjct: 139 WHTTAQNVLLSAGCDNVIMVWDVGT 163
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.422 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 325 303 0.00097 115 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 116
No. of states in DFA: 617 (66 KB)
Total size of DFA: 255 KB (2135 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.97u 0.14s 26.11t Elapsed: 00:00:02
Total cpu time: 25.98u 0.14s 26.12t Elapsed: 00:00:02
Start: Thu May 9 17:07:35 2013 End: Thu May 9 17:07:37 2013
WARNINGS ISSUED: 1