Query 020480
Match_columns 325
No_of_seqs 367 out of 2869
Neff 10.5
Searched_HMMs 29240
Date Mon Mar 25 03:36:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020480.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020480hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xyi_A Probable histone-bindin 100.0 1.5E-45 5E-50 333.2 28.5 299 3-302 7-309 (430)
2 4gqb_B Methylosome protein 50; 100.0 4.5E-30 1.5E-34 224.9 23.8 203 41-302 82-289 (344)
3 4gqb_B Methylosome protein 50; 100.0 1.3E-30 4.5E-35 228.3 19.4 222 17-302 101-331 (344)
4 3ow8_A WD repeat-containing pr 100.0 6.9E-30 2.3E-34 221.8 19.4 220 16-301 99-320 (321)
5 4g56_B MGC81050 protein; prote 100.0 7.6E-29 2.6E-33 218.3 20.2 226 17-302 113-343 (357)
6 1vyh_C Platelet-activating fac 100.0 2.6E-28 8.8E-33 218.9 22.3 220 16-301 169-410 (410)
7 2ynn_A Coatomer subunit beta'; 100.0 5.3E-28 1.8E-32 208.2 20.4 225 16-302 32-259 (304)
8 3ow8_A WD repeat-containing pr 100.0 7.6E-28 2.6E-32 208.9 20.7 222 15-302 54-279 (321)
9 1vyh_C Platelet-activating fac 100.0 5.8E-28 2E-32 216.6 19.6 221 17-302 128-369 (410)
10 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.4E-27 8.2E-32 207.7 21.8 205 43-301 18-224 (345)
11 1got_B GT-beta; complex (GTP-b 100.0 5E-27 1.7E-31 205.3 22.7 222 17-302 75-301 (340)
12 2pm7_B Protein transport prote 100.0 3.5E-27 1.2E-31 202.3 20.8 234 16-301 28-284 (297)
13 2pm7_B Protein transport prote 100.0 4.7E-26 1.6E-30 195.3 27.2 207 43-302 11-238 (297)
14 1got_B GT-beta; complex (GTP-b 100.0 6E-27 2.1E-31 204.7 21.9 216 17-299 117-340 (340)
15 2ynn_A Coatomer subunit beta'; 100.0 7.1E-26 2.4E-30 194.9 26.8 205 35-302 9-217 (304)
16 4g56_B MGC81050 protein; prote 100.0 1.1E-26 3.7E-31 204.5 22.2 228 18-302 69-301 (357)
17 3frx_A Guanine nucleotide-bind 100.0 1.3E-25 4.5E-30 194.5 27.4 209 34-302 12-227 (319)
18 2hes_X YDR267CP; beta-propelle 99.9 5.5E-27 1.9E-31 204.2 18.4 235 17-301 32-279 (330)
19 2hes_X YDR267CP; beta-propelle 99.9 4.8E-26 1.6E-30 198.2 23.7 170 124-302 57-230 (330)
20 3iz6_a 40S ribosomal protein R 99.9 6.6E-27 2.3E-31 207.6 18.4 249 16-301 85-374 (380)
21 4e54_B DNA damage-binding prot 99.9 4.9E-27 1.7E-31 212.2 17.4 201 44-302 122-327 (435)
22 3iz6_a 40S ribosomal protein R 99.9 1.1E-26 3.8E-31 206.1 18.8 212 35-302 62-280 (380)
23 2pbi_B Guanine nucleotide-bind 99.9 7E-26 2.4E-30 199.1 22.8 226 16-301 83-314 (354)
24 3bg1_A Protein SEC13 homolog; 99.9 5.3E-26 1.8E-30 196.8 20.2 212 36-302 10-247 (316)
25 1erj_A Transcriptional repress 99.9 7.1E-26 2.4E-30 201.9 20.8 226 17-302 143-389 (393)
26 1nr0_A Actin interacting prote 99.9 4E-26 1.4E-30 214.8 19.6 220 18-302 38-270 (611)
27 3f3f_A Nucleoporin SEH1; struc 99.9 4.3E-25 1.5E-29 191.7 24.4 225 34-302 6-337 (351)
28 2pbi_B Guanine nucleotide-bind 99.9 1.2E-24 4.1E-29 191.3 26.9 203 43-302 66-271 (354)
29 2j04_B YDR362CP, TAU91; beta p 99.9 4.6E-26 1.6E-30 209.6 17.1 239 16-302 180-428 (524)
30 1nr0_A Actin interacting prote 99.9 5.1E-26 1.8E-30 214.1 17.7 226 17-302 79-355 (611)
31 3fm0_A Protein CIAO1; WDR39,SG 99.9 3E-25 1E-29 194.4 21.1 171 116-301 5-180 (345)
32 4ery_A WD repeat-containing pr 99.9 2.4E-24 8.1E-29 185.7 26.0 202 35-302 19-223 (312)
33 2ymu_A WD-40 repeat protein; u 99.9 3.4E-25 1.1E-29 206.6 21.1 212 17-299 364-577 (577)
34 2j04_B YDR362CP, TAU91; beta p 99.9 3.8E-24 1.3E-28 196.9 27.2 228 40-302 132-386 (524)
35 3ei3_B DNA damage-binding prot 99.9 2.1E-24 7.2E-29 191.3 24.6 224 19-302 53-282 (383)
36 3jrp_A Fusion protein of prote 99.9 6.9E-25 2.4E-29 193.3 21.4 233 17-302 31-287 (379)
37 2xyi_A Probable histone-bindin 99.9 4.4E-25 1.5E-29 199.1 20.1 239 18-305 150-413 (430)
38 4ery_A WD repeat-containing pr 99.9 1.9E-24 6.6E-29 186.2 23.2 161 120-302 18-180 (312)
39 2xzm_R RACK1; ribosome, transl 99.9 9.7E-25 3.3E-29 190.9 21.1 221 15-302 45-285 (343)
40 4h5i_A Guanine nucleotide-exch 99.9 4.1E-25 1.4E-29 195.0 18.9 166 119-301 170-342 (365)
41 3frx_A Guanine nucleotide-bind 99.9 1E-24 3.5E-29 188.9 20.8 219 16-301 37-266 (319)
42 2xzm_R RACK1; ribosome, transl 99.9 5.8E-24 2E-28 186.0 25.2 162 120-301 71-243 (343)
43 2pm9_A Protein WEB1, protein t 99.9 3.2E-25 1.1E-29 198.2 17.4 240 16-302 42-294 (416)
44 4gga_A P55CDC, cell division c 99.9 1.8E-24 6E-29 194.5 21.5 253 17-302 123-395 (420)
45 3ei3_B DNA damage-binding prot 99.9 1.6E-24 5.6E-29 192.0 20.5 227 17-302 94-339 (383)
46 3jrp_A Fusion protein of prote 99.9 6E-24 2E-28 187.2 23.2 212 34-302 6-240 (379)
47 3dm0_A Maltose-binding peripla 99.9 3.9E-24 1.3E-28 204.2 23.3 212 35-302 378-592 (694)
48 1erj_A Transcriptional repress 99.9 3.5E-24 1.2E-28 190.9 21.1 198 43-302 125-341 (393)
49 2ymu_A WD-40 repeat protein; u 99.9 7E-24 2.4E-28 197.7 23.7 214 17-301 323-538 (577)
50 3dwl_C Actin-related protein 2 99.9 3.5E-25 1.2E-29 195.7 13.2 231 17-300 31-279 (377)
51 3vl1_A 26S proteasome regulato 99.9 1.6E-24 5.4E-29 194.2 17.6 217 17-302 76-322 (420)
52 1sq9_A Antiviral protein SKI8; 99.9 2.8E-24 9.4E-29 191.1 18.9 233 17-301 89-394 (397)
53 1gxr_A ESG1, transducin-like e 99.9 2.9E-23 1E-27 179.9 24.6 221 18-302 71-296 (337)
54 1k8k_C P40, ARP2/3 complex 41 99.9 2.9E-24 1E-28 189.0 18.5 229 17-302 28-274 (372)
55 3dwl_C Actin-related protein 2 99.9 1.1E-24 3.9E-29 192.4 15.5 205 42-302 12-236 (377)
56 4e54_B DNA damage-binding prot 99.9 1.4E-24 4.7E-29 196.1 16.3 166 121-303 115-283 (435)
57 3bg1_A Protein SEC13 homolog; 99.9 7.9E-25 2.7E-29 189.4 13.4 167 121-301 9-197 (316)
58 3vl1_A 26S proteasome regulato 99.9 2.8E-24 9.5E-29 192.6 17.2 223 17-302 117-365 (420)
59 2pm9_A Protein WEB1, protein t 99.9 6.6E-25 2.2E-29 196.2 12.9 236 17-304 87-339 (416)
60 4ggc_A P55CDC, cell division c 99.9 1.2E-23 4.3E-28 181.0 20.3 254 17-302 43-315 (318)
61 2aq5_A Coronin-1A; WD40 repeat 99.9 6.3E-24 2.2E-28 189.6 18.9 229 17-302 55-299 (402)
62 1k8k_C P40, ARP2/3 complex 41 99.9 1.1E-23 3.9E-28 185.2 19.6 239 17-303 72-362 (372)
63 3k26_A Polycomb protein EED; W 99.9 2.1E-24 7.1E-29 189.3 14.7 234 18-301 43-365 (366)
64 2aq5_A Coronin-1A; WD40 repeat 99.9 1.1E-23 3.7E-28 188.1 19.3 168 122-303 78-255 (402)
65 4a11_B DNA excision repair pro 99.9 7.3E-23 2.5E-27 182.1 24.4 230 15-302 19-276 (408)
66 4aez_A CDC20, WD repeat-contai 99.9 1.5E-23 5E-28 187.3 19.6 221 17-302 154-380 (401)
67 3dm0_A Maltose-binding peripla 99.9 1.2E-23 4.2E-28 200.7 20.1 221 15-302 401-632 (694)
68 4aez_A CDC20, WD repeat-contai 99.9 4.7E-23 1.6E-27 184.0 22.3 220 17-302 111-336 (401)
69 3lrv_A PRE-mRNA-splicing facto 99.9 2.7E-24 9.3E-29 188.0 13.7 163 119-300 119-290 (343)
70 4a11_B DNA excision repair pro 99.9 5.1E-23 1.8E-27 183.0 21.9 234 17-303 64-366 (408)
71 2w18_A PALB2, fancn, partner a 99.9 2.8E-23 9.4E-28 177.6 18.6 157 120-300 173-355 (356)
72 1r5m_A SIR4-interacting protei 99.9 4.3E-23 1.5E-27 184.4 20.8 238 7-302 13-278 (425)
73 3jro_A Fusion protein of prote 99.9 1.9E-23 6.5E-28 201.1 19.7 232 17-301 29-284 (753)
74 4aow_A Guanine nucleotide-bind 99.9 1.4E-23 4.7E-28 182.4 16.6 174 108-301 154-336 (340)
75 3i2n_A WD repeat-containing pr 99.9 1.1E-23 3.6E-28 184.3 15.5 235 17-302 88-353 (357)
76 3odt_A Protein DOA1; ubiquitin 99.9 2.9E-23 1E-27 178.1 17.9 242 17-303 37-297 (313)
77 3zwl_B Eukaryotic translation 99.9 1.4E-22 4.9E-27 177.6 22.6 236 17-303 94-347 (369)
78 3jro_A Fusion protein of prote 99.9 7.1E-23 2.4E-27 197.1 22.3 212 34-302 4-238 (753)
79 3f3f_A Nucleoporin SEH1; struc 99.9 1E-22 3.5E-27 176.7 21.1 173 121-302 7-249 (351)
80 3mmy_A MRNA export factor; mRN 99.9 1.3E-22 4.3E-27 177.9 21.4 212 32-299 32-343 (368)
81 3k26_A Polycomb protein EED; W 99.9 7E-23 2.4E-27 179.5 19.8 161 124-302 68-260 (366)
82 1gxr_A ESG1, transducin-like e 99.9 7.3E-22 2.5E-26 171.0 25.5 203 41-302 51-255 (337)
83 1r5m_A SIR4-interacting protei 99.9 1.6E-23 5.5E-28 187.2 15.2 161 121-301 243-424 (425)
84 3i2n_A WD repeat-containing pr 99.9 8.7E-22 3E-26 172.0 25.8 205 42-303 19-244 (357)
85 3dw8_B Serine/threonine-protei 99.9 3.9E-23 1.3E-27 186.5 17.4 253 17-302 48-373 (447)
86 3v7d_B Cell division control p 99.9 1.4E-22 4.7E-27 184.2 20.1 229 16-303 139-382 (464)
87 1sq9_A Antiviral protein SKI8; 99.9 1.2E-22 4.1E-27 180.4 19.3 232 17-302 34-322 (397)
88 4aow_A Guanine nucleotide-bind 99.9 7.8E-22 2.7E-26 171.3 22.9 215 30-302 29-246 (340)
89 2j04_A TAU60, YPL007P, hypothe 99.9 1.5E-22 5E-27 183.7 18.8 160 122-301 82-253 (588)
90 3dw8_B Serine/threonine-protei 99.9 8.2E-22 2.8E-26 177.8 23.7 221 42-302 29-315 (447)
91 2oaj_A Protein SNI1; WD40 repe 99.9 6.6E-22 2.3E-26 193.4 23.3 198 41-301 17-241 (902)
92 4h5i_A Guanine nucleotide-exch 99.9 1.7E-21 5.6E-26 171.9 22.6 177 125-322 133-326 (365)
93 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.8E-21 2E-25 173.0 26.5 162 123-302 100-271 (450)
94 3zwl_B Eukaryotic translation 99.9 9.4E-21 3.2E-25 166.0 27.1 203 42-302 33-249 (369)
95 4gq1_A NUP37; propeller, trans 99.9 4.6E-22 1.6E-26 177.2 18.8 238 16-294 108-382 (393)
96 3mkq_A Coatomer beta'-subunit; 99.9 2.1E-22 7.2E-27 195.1 17.4 221 17-302 33-259 (814)
97 3vu4_A KMHSV2; beta-propeller 99.9 5.2E-21 1.8E-25 168.1 24.1 218 23-302 3-271 (355)
98 3gre_A Serine/threonine-protei 99.9 1.1E-22 3.9E-27 183.3 13.7 232 17-302 84-359 (437)
99 3gre_A Serine/threonine-protei 99.9 2.7E-22 9.4E-27 180.8 16.1 222 23-302 47-292 (437)
100 2vdu_B TRNA (guanine-N(7)-)-me 99.9 9.2E-21 3.1E-25 171.7 25.9 199 43-300 104-337 (450)
101 3mkq_A Coatomer beta'-subunit; 99.9 7.9E-21 2.7E-25 184.1 25.9 198 43-302 15-217 (814)
102 1yfq_A Cell cycle arrest prote 99.9 6.5E-21 2.2E-25 165.7 22.8 196 43-302 13-225 (342)
103 1p22_A F-BOX/WD-repeat protein 99.9 1.2E-21 4.2E-26 176.6 18.0 159 120-303 251-415 (435)
104 2j04_A TAU60, YPL007P, hypothe 99.9 3.4E-21 1.2E-25 174.8 20.3 152 127-301 131-296 (588)
105 1pgu_A Actin interacting prote 99.9 3E-21 1E-25 180.9 20.2 224 18-302 38-283 (615)
106 3sfz_A APAF-1, apoptotic pepti 99.9 4.1E-21 1.4E-25 194.3 22.2 162 120-302 610-774 (1249)
107 3mmy_A MRNA export factor; mRN 99.9 4E-21 1.4E-25 168.3 18.7 124 121-261 35-162 (368)
108 3v7d_B Cell division control p 99.9 3.9E-21 1.3E-25 174.5 19.1 241 16-302 180-421 (464)
109 3sfz_A APAF-1, apoptotic pepti 99.9 2.8E-21 9.6E-26 195.5 19.6 226 17-301 635-912 (1249)
110 4gga_A P55CDC, cell division c 99.9 6.9E-20 2.3E-24 164.5 26.1 174 109-302 130-310 (420)
111 1p22_A F-BOX/WD-repeat protein 99.9 5.6E-21 1.9E-25 172.3 19.0 214 17-302 151-365 (435)
112 1pgu_A Actin interacting prote 99.9 6.7E-21 2.3E-25 178.5 19.8 206 42-301 19-237 (615)
113 3lrv_A PRE-mRNA-splicing facto 99.9 2.9E-20 9.8E-25 162.4 21.7 163 125-303 76-245 (343)
114 3odt_A Protein DOA1; ubiquitin 99.9 4.3E-19 1.5E-23 152.0 26.1 200 34-302 13-214 (313)
115 1yfq_A Cell cycle arrest prote 99.9 1.3E-20 4.5E-25 163.8 16.6 158 123-302 9-179 (342)
116 2oaj_A Protein SNI1; WD40 repe 99.9 3.7E-20 1.3E-24 181.1 20.6 164 115-302 7-182 (902)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.8 4.7E-20 1.6E-24 166.7 19.7 212 17-302 137-348 (445)
118 4gq1_A NUP37; propeller, trans 99.8 1.6E-20 5.4E-25 167.3 16.2 149 139-302 102-286 (393)
119 3vu4_A KMHSV2; beta-propeller 99.8 5.4E-20 1.9E-24 161.6 19.2 223 18-302 80-336 (355)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 6.4E-20 2.2E-24 165.8 19.4 212 17-302 177-391 (445)
121 4ggc_A P55CDC, cell division c 99.8 2.2E-18 7.6E-23 148.0 25.6 166 117-302 59-230 (318)
122 1l0q_A Surface layer protein; 99.8 3.4E-18 1.2E-22 151.5 21.0 218 17-301 10-232 (391)
123 2oit_A Nucleoporin 214KDA; NH2 99.8 4.6E-19 1.6E-23 159.7 14.9 169 121-303 88-279 (434)
124 1l0q_A Surface layer protein; 99.8 1.1E-17 3.7E-22 148.3 20.1 217 17-301 52-274 (391)
125 2oit_A Nucleoporin 214KDA; NH2 99.8 1.2E-18 4.2E-23 156.9 14.0 169 126-301 37-222 (434)
126 3bws_A Protein LP49; two-domai 99.7 7E-17 2.4E-21 145.0 19.0 217 17-301 189-431 (433)
127 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.3E-16 1.8E-20 139.0 20.7 214 19-300 159-385 (415)
128 2w18_A PALB2, fancn, partner a 99.7 5E-17 1.7E-21 139.0 13.1 136 146-302 155-314 (356)
129 3bws_A Protein LP49; two-domai 99.7 1.2E-16 4.2E-21 143.4 16.1 168 112-301 109-291 (433)
130 2hqs_A Protein TOLB; TOLB, PAL 99.6 1.8E-14 6E-19 129.1 20.9 156 121-301 174-343 (415)
131 2ojh_A Uncharacterized protein 99.6 1.3E-14 4.5E-19 122.5 16.1 207 17-287 20-230 (297)
132 1ri6_A Putative isomerase YBHE 99.6 2.1E-14 7E-19 124.4 17.7 234 17-301 13-261 (343)
133 3hfq_A Uncharacterized protein 99.6 7.6E-13 2.6E-17 115.2 24.1 164 127-300 142-315 (347)
134 3hfq_A Uncharacterized protein 99.6 2.9E-13 9.9E-18 117.8 21.1 199 64-301 3-217 (347)
135 1ri6_A Putative isomerase YBHE 99.6 8.8E-14 3E-18 120.3 17.0 176 114-301 26-208 (343)
136 2ojh_A Uncharacterized protein 99.6 2.6E-13 8.8E-18 114.5 19.4 162 120-301 36-203 (297)
137 3u4y_A Uncharacterized protein 99.6 3.8E-13 1.3E-17 116.1 19.8 227 17-301 18-251 (331)
138 1nir_A Nitrite reductase; hemo 99.5 2.1E-12 7.3E-17 119.4 21.5 182 126-323 280-493 (543)
139 1nir_A Nitrite reductase; hemo 99.5 9.3E-13 3.2E-17 121.8 18.9 154 128-302 181-355 (543)
140 3vgz_A Uncharacterized protein 99.5 2E-11 6.7E-16 106.1 25.4 152 128-301 143-302 (353)
141 2ecf_A Dipeptidyl peptidase IV 99.5 5.8E-14 2E-18 134.7 9.9 158 122-301 148-366 (741)
142 3vgz_A Uncharacterized protein 99.5 8.9E-12 3E-16 108.3 22.8 161 120-301 83-261 (353)
143 1xfd_A DIP, dipeptidyl aminope 99.5 3.9E-13 1.3E-17 128.6 15.0 153 127-300 62-287 (723)
144 1xfd_A DIP, dipeptidyl aminope 99.5 4E-13 1.4E-17 128.4 14.6 211 18-287 36-319 (723)
145 3u4y_A Uncharacterized protein 99.5 7.1E-12 2.4E-16 108.1 20.1 159 124-301 39-206 (331)
146 1k32_A Tricorn protease; prote 99.5 2.8E-12 9.7E-17 127.7 19.6 154 122-300 333-500 (1045)
147 2ecf_A Dipeptidyl peptidase IV 99.5 1.5E-12 5.1E-17 124.9 17.0 153 126-301 109-320 (741)
148 1pby_B Quinohemoprotein amine 99.4 6.9E-12 2.4E-16 108.1 18.0 154 127-302 83-310 (337)
149 3scy_A Hypothetical bacterial 99.4 5.8E-11 2E-15 103.8 24.0 203 63-301 13-241 (361)
150 3o4h_A Acylamino-acid-releasin 99.4 2.5E-13 8.4E-18 126.8 7.9 148 127-300 111-274 (582)
151 2z3z_A Dipeptidyl aminopeptida 99.4 6.3E-12 2.2E-16 119.9 16.2 166 120-301 115-341 (706)
152 1jmx_B Amine dehydrogenase; ox 99.4 1.7E-11 5.7E-16 106.2 16.2 155 127-302 93-325 (349)
153 3scy_A Hypothetical bacterial 99.3 4.7E-11 1.6E-15 104.4 17.8 164 128-300 157-335 (361)
154 1k32_A Tricorn protease; prote 99.3 2.2E-11 7.4E-16 121.3 16.6 152 124-301 294-460 (1045)
155 2z3z_A Dipeptidyl aminopeptida 99.3 6.5E-11 2.2E-15 112.9 18.3 156 123-300 255-433 (706)
156 3o4h_A Acylamino-acid-releasin 99.3 8.4E-11 2.9E-15 109.7 18.6 129 129-287 153-295 (582)
157 1jof_A Carboxy-CIS,CIS-muconat 99.3 2.1E-10 7.2E-15 100.6 19.3 195 64-300 3-222 (365)
158 1jmx_B Amine dehydrogenase; ox 99.3 5.1E-11 1.7E-15 103.2 13.6 152 130-301 4-174 (349)
159 1z68_A Fibroblast activation p 99.3 2.7E-11 9.2E-16 115.8 12.7 141 127-287 61-266 (719)
160 1pby_B Quinohemoprotein amine 99.2 2.5E-10 8.5E-15 98.2 15.8 114 127-261 35-165 (337)
161 1xip_A Nucleoporin NUP159; bet 99.2 2.1E-10 7.2E-15 100.7 13.6 151 127-301 39-190 (388)
162 4a5s_A Dipeptidyl peptidase 4 99.2 1.3E-09 4.3E-14 104.7 20.0 151 129-300 65-292 (740)
163 1jof_A Carboxy-CIS,CIS-muconat 99.2 2.5E-09 8.6E-14 93.7 19.6 163 124-301 143-340 (365)
164 1xip_A Nucleoporin NUP159; bet 99.2 8.9E-10 3E-14 96.7 16.1 135 121-287 84-227 (388)
165 1q7f_A NHL, brain tumor CG1071 99.2 4E-09 1.4E-13 88.9 19.2 152 124-300 119-278 (286)
166 1z68_A Fibroblast activation p 99.1 6.6E-11 2.3E-15 113.1 8.4 133 130-287 20-182 (719)
167 3fvz_A Peptidyl-glycine alpha- 99.1 2.8E-08 9.4E-13 85.8 20.8 156 124-300 89-275 (329)
168 4a5s_A Dipeptidyl peptidase 4 99.0 1.2E-09 4E-14 104.9 11.7 136 126-287 17-184 (740)
169 3azo_A Aminopeptidase; POP fam 99.0 2.2E-09 7.4E-14 101.6 12.5 160 124-299 128-320 (662)
170 2dg1_A DRP35, lactonase; beta 99.0 9.3E-08 3.2E-12 82.3 20.8 158 122-300 41-211 (333)
171 3fvz_A Peptidyl-glycine alpha- 99.0 5.9E-08 2E-12 83.7 19.4 156 125-301 23-226 (329)
172 2xdw_A Prolyl endopeptidase; a 99.0 7.4E-08 2.5E-12 91.9 21.6 154 128-298 173-362 (710)
173 3azo_A Aminopeptidase; POP fam 99.0 8E-09 2.7E-13 97.7 14.6 158 130-298 81-268 (662)
174 3pe7_A Oligogalacturonate lyas 98.9 9.3E-09 3.2E-13 90.4 12.8 158 122-299 184-379 (388)
175 3pe7_A Oligogalacturonate lyas 98.9 2.3E-08 7.9E-13 87.9 14.1 133 131-286 41-201 (388)
176 1q7f_A NHL, brain tumor CG1071 98.9 2.2E-07 7.7E-12 78.1 19.3 151 125-300 76-236 (286)
177 2xdw_A Prolyl endopeptidase; a 98.9 1.3E-07 4.6E-12 90.2 18.8 164 124-300 231-412 (710)
178 3e5z_A Putative gluconolactona 98.8 2.5E-07 8.6E-12 78.2 18.3 156 123-301 25-201 (296)
179 2gop_A Trilobed protease; beta 98.8 1.9E-07 6.4E-12 80.7 17.1 141 128-301 106-290 (347)
180 2bkl_A Prolyl endopeptidase; m 98.8 1.6E-07 5.4E-12 89.5 16.9 152 129-301 171-348 (695)
181 1rwi_B Serine/threonine-protei 98.8 2.7E-07 9.3E-12 76.7 16.2 153 126-300 108-262 (270)
182 2bkl_A Prolyl endopeptidase; m 98.7 1.8E-07 6.1E-12 89.1 14.2 158 124-300 119-302 (695)
183 3c5m_A Oligogalacturonate lyas 98.7 3.6E-07 1.2E-11 80.3 14.4 150 108-286 172-363 (396)
184 1qks_A Cytochrome CD1 nitrite 98.7 2.7E-06 9.3E-11 78.7 20.5 165 119-301 190-372 (567)
185 2dg1_A DRP35, lactonase; beta 98.7 1.7E-07 5.8E-12 80.6 11.3 137 126-287 6-148 (333)
186 1rwi_B Serine/threonine-protei 98.7 1.4E-06 4.8E-11 72.3 16.6 152 125-300 66-220 (270)
187 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 5.6E-07 1.9E-11 76.5 14.3 157 126-300 117-297 (314)
188 2oiz_A Aromatic amine dehydrog 98.6 6.4E-07 2.2E-11 78.3 13.7 90 184-286 259-360 (361)
189 2oiz_A Aromatic amine dehydrog 98.6 1.3E-05 4.6E-10 69.9 21.8 64 233-302 259-334 (361)
190 3e5z_A Putative gluconolactona 98.6 2.4E-06 8.1E-11 72.2 16.6 159 123-300 66-244 (296)
191 2z2n_A Virginiamycin B lyase; 98.6 6.3E-06 2.2E-10 69.2 19.0 154 123-300 12-169 (299)
192 3no2_A Uncharacterized protein 98.6 4.1E-06 1.4E-10 70.2 17.0 154 126-307 37-202 (276)
193 3c5m_A Oligogalacturonate lyas 98.5 8.5E-08 2.9E-12 84.3 6.3 137 126-286 36-201 (396)
194 2gop_A Trilobed protease; beta 98.5 1.5E-06 5.3E-11 74.9 14.2 131 126-287 59-228 (347)
195 2z2n_A Virginiamycin B lyase; 98.5 1.6E-05 5.5E-10 66.7 19.2 153 124-300 55-211 (299)
196 3no2_A Uncharacterized protein 98.5 5E-06 1.7E-10 69.7 14.7 144 139-307 6-161 (276)
197 3g4e_A Regucalcin; six bladed 98.4 7.1E-06 2.4E-10 69.4 15.5 145 126-286 98-254 (297)
198 1qks_A Cytochrome CD1 nitrite 98.4 3.1E-05 1.1E-09 71.7 20.8 140 139-300 168-327 (567)
199 1yr2_A Prolyl oligopeptidase; 98.4 1.4E-05 4.7E-10 76.7 17.8 154 128-300 211-391 (741)
200 2ghs_A AGR_C_1268P; regucalcin 98.4 0.00014 4.9E-09 62.3 21.7 140 127-286 135-284 (326)
201 1yr2_A Prolyl oligopeptidase; 98.3 6.4E-05 2.2E-09 72.0 20.7 157 124-300 266-439 (741)
202 3dsm_A Uncharacterized protein 98.3 2.3E-05 8E-10 67.3 15.2 154 121-300 79-251 (328)
203 2qc5_A Streptogramin B lactona 98.3 9.9E-05 3.4E-09 61.8 18.6 152 124-299 18-173 (300)
204 2qc5_A Streptogramin B lactona 98.3 0.00013 4.3E-09 61.1 19.3 152 125-300 61-216 (300)
205 3hrp_A Uncharacterized protein 98.3 3.3E-05 1.1E-09 68.6 16.2 139 124-287 217-393 (409)
206 3hrp_A Uncharacterized protein 98.3 3.4E-05 1.2E-09 68.5 16.1 152 127-300 132-296 (409)
207 3iuj_A Prolyl endopeptidase; h 98.2 0.00015 5E-09 69.0 20.3 139 129-286 178-338 (693)
208 3dr2_A Exported gluconolactona 98.2 6.2E-05 2.1E-09 63.8 15.3 141 122-286 41-200 (305)
209 3g4e_A Regucalcin; six bladed 98.2 0.00029 1E-08 59.4 19.4 153 125-300 12-178 (297)
210 3dsm_A Uncharacterized protein 98.2 8.5E-05 2.9E-09 63.7 16.1 138 121-281 167-319 (328)
211 2ghs_A AGR_C_1268P; regucalcin 98.2 0.00018 6.3E-09 61.6 18.1 150 127-300 50-208 (326)
212 1pjx_A Dfpase, DIISOPROPYLFLUO 98.1 4.7E-05 1.6E-09 64.4 13.8 122 125-260 171-300 (314)
213 3iuj_A Prolyl endopeptidase; h 98.1 6.6E-05 2.3E-09 71.4 14.5 144 124-286 127-292 (693)
214 2qe8_A Uncharacterized protein 98.0 0.00016 5.4E-09 62.4 14.9 156 126-287 120-304 (343)
215 2qe8_A Uncharacterized protein 98.0 0.00013 4.4E-09 63.0 13.8 130 114-261 7-156 (343)
216 1npe_A Nidogen, entactin; glyc 97.9 0.0042 1.4E-07 51.2 21.3 154 127-300 37-196 (267)
217 2hz6_A Endoplasmic reticulum t 97.8 3E-06 1E-10 74.3 0.4 144 139-310 10-159 (369)
218 3dr2_A Exported gluconolactona 97.8 0.00051 1.7E-08 58.1 13.6 152 123-299 83-264 (305)
219 2hz6_A Endoplasmic reticulum t 97.8 1.7E-06 5.8E-11 75.8 -2.0 153 126-307 38-199 (369)
220 2ece_A 462AA long hypothetical 97.7 0.0011 3.8E-08 58.7 14.7 153 128-300 140-350 (462)
221 2mad_H Methylamine dehydrogena 97.6 0.0023 7.9E-08 55.9 16.2 92 149-261 48-158 (373)
222 2iwa_A Glutamine cyclotransfer 97.6 0.0063 2.1E-07 50.2 17.2 147 115-287 8-164 (266)
223 3sjl_D Methylamine dehydrogena 97.6 0.00042 1.5E-08 60.5 10.6 117 132-269 39-176 (386)
224 2mad_H Methylamine dehydrogena 97.6 0.0033 1.1E-07 54.9 16.4 108 130-261 70-197 (373)
225 2ece_A 462AA long hypothetical 97.5 0.0013 4.4E-08 58.3 12.9 145 128-287 190-394 (462)
226 3c75_H MADH, methylamine dehyd 97.4 0.001 3.5E-08 59.0 11.1 109 136-262 83-212 (426)
227 3nol_A Glutamine cyclotransfer 97.4 0.0098 3.3E-07 48.7 15.9 146 115-287 30-184 (262)
228 1npe_A Nidogen, entactin; glyc 97.4 0.032 1.1E-06 45.8 19.6 118 126-261 79-200 (267)
229 3nok_A Glutaminyl cyclase; bet 97.4 0.0092 3.1E-07 49.0 15.4 145 115-287 42-193 (268)
230 2iwa_A Glutamine cyclotransfer 97.4 0.01 3.5E-07 49.0 15.4 144 130-299 70-234 (266)
231 3sjl_D Methylamine dehydrogena 97.3 0.0037 1.3E-07 54.5 13.3 159 117-300 70-254 (386)
232 3v64_C Agrin; beta propeller, 97.3 0.063 2.1E-06 46.2 21.3 144 123-286 70-215 (349)
233 3mbr_X Glutamine cyclotransfer 97.2 0.046 1.6E-06 44.2 17.8 125 114-262 7-136 (243)
234 1fwx_A Nitrous oxide reductase 97.2 0.0096 3.3E-07 54.6 15.3 163 121-302 129-361 (595)
235 3v65_B Low-density lipoprotein 97.2 0.044 1.5E-06 47.9 19.2 143 123-285 113-257 (386)
236 3nol_A Glutamine cyclotransfer 97.2 0.015 5E-07 47.7 14.3 137 125-286 84-237 (262)
237 3c75_H MADH, methylamine dehyd 97.1 0.016 5.6E-07 51.3 15.2 121 117-259 110-248 (426)
238 2fp8_A Strictosidine synthase; 97.1 0.043 1.5E-06 46.4 17.4 138 126-286 19-197 (322)
239 3hxj_A Pyrrolo-quinoline quino 97.0 0.019 6.4E-07 48.4 13.8 147 125-301 176-323 (330)
240 3hxj_A Pyrrolo-quinoline quino 96.9 0.018 6.3E-07 48.5 13.7 146 124-299 135-281 (330)
241 1kb0_A Quinohemoprotein alcoho 96.9 0.014 4.9E-07 55.1 14.0 75 201-286 457-532 (677)
242 3mbr_X Glutamine cyclotransfer 96.9 0.04 1.4E-06 44.6 14.7 126 136-286 73-216 (243)
243 3nok_A Glutaminyl cyclase; bet 96.9 0.035 1.2E-06 45.5 14.1 126 136-286 104-247 (268)
244 2xe4_A Oligopeptidase B; hydro 96.8 0.15 5.2E-06 48.7 19.7 118 128-259 223-354 (751)
245 3qqz_A Putative uncharacterize 96.7 0.18 6.2E-06 41.2 17.6 149 124-285 25-184 (255)
246 3tc9_A Hypothetical hydrolase; 96.7 0.068 2.3E-06 47.4 16.0 150 127-299 138-298 (430)
247 1ijq_A LDL receptor, low-densi 96.7 0.22 7.7E-06 42.0 21.0 149 122-286 26-176 (316)
248 3v64_C Agrin; beta propeller, 96.7 0.25 8.6E-06 42.4 19.8 137 127-282 117-254 (349)
249 3p5b_L Low density lipoprotein 96.7 0.3 1E-05 42.8 22.3 150 122-286 108-258 (400)
250 3v65_B Low-density lipoprotein 96.7 0.29 9.9E-06 42.6 19.8 138 127-283 160-298 (386)
251 1yiq_A Quinohemoprotein alcoho 96.6 0.055 1.9E-06 51.2 15.5 76 200-286 454-530 (689)
252 1mda_H Methylamine dehydrogena 96.6 0.0075 2.6E-07 52.4 8.6 102 139-259 33-158 (368)
253 3m0c_C LDL receptor, low-densi 96.6 0.36 1.2E-05 46.3 20.8 146 124-285 422-569 (791)
254 1fwx_A Nitrous oxide reductase 96.5 0.0084 2.9E-07 55.0 8.7 135 122-261 273-433 (595)
255 1ijq_A LDL receptor, low-densi 96.4 0.34 1.2E-05 40.8 18.9 118 126-261 77-197 (316)
256 3sov_A LRP-6, low-density lipo 96.4 0.38 1.3E-05 40.7 19.0 141 127-286 36-178 (318)
257 2xe4_A Oligopeptidase B; hydro 96.3 0.13 4.5E-06 49.1 16.2 141 127-286 175-332 (751)
258 2fp8_A Strictosidine synthase; 96.3 0.2 6.8E-06 42.2 15.7 138 127-287 127-296 (322)
259 2p9w_A MAL S 1 allergenic prot 96.3 0.21 7.3E-06 42.3 15.3 158 125-301 12-214 (334)
260 3pbp_A Nucleoporin NUP82; beta 96.2 0.59 2E-05 41.0 18.8 126 146-285 39-191 (452)
261 1kb0_A Quinohemoprotein alcoho 96.2 0.064 2.2E-06 50.7 13.0 54 250-307 457-514 (677)
262 3pbp_A Nucleoporin NUP82; beta 96.1 0.16 5.4E-06 44.6 14.0 126 127-255 67-208 (452)
263 4a0p_A LRP6, LRP-6, low-densit 96.1 0.83 2.8E-05 42.6 19.8 141 126-286 37-178 (628)
264 1mda_H Methylamine dehydrogena 96.0 0.036 1.2E-06 48.1 9.7 89 184-283 269-366 (368)
265 3qqz_A Putative uncharacterize 96.0 0.49 1.7E-05 38.6 16.9 151 126-287 70-237 (255)
266 3kya_A Putative phosphatase; s 96.0 0.33 1.1E-05 43.7 15.9 146 128-286 141-322 (496)
267 3q7m_A Lipoprotein YFGL, BAMB; 95.8 0.25 8.4E-06 42.6 14.3 107 139-270 54-170 (376)
268 3sov_A LRP-6, low-density lipo 95.8 0.75 2.6E-05 38.8 19.3 138 126-284 79-219 (318)
269 2xbg_A YCF48-like protein; pho 95.8 0.68 2.3E-05 39.1 16.5 153 123-298 160-318 (327)
270 4a2l_A BT_4663, two-component 95.7 1 3.5E-05 43.2 19.4 141 126-293 310-472 (795)
271 3q7m_A Lipoprotein YFGL, BAMB; 95.7 0.23 7.8E-06 42.8 13.6 132 139-298 240-374 (376)
272 3p5b_L Low density lipoprotein 95.5 1.2 4E-05 39.0 18.9 120 126-261 159-279 (400)
273 1n7d_A LDL receptor, low-densi 95.4 0.055 1.9E-06 51.3 9.0 145 126-285 406-551 (699)
274 4a2l_A BT_4663, two-component 95.1 2.1 7E-05 41.1 19.3 140 126-293 357-518 (795)
275 4hw6_A Hypothetical protein, I 95.1 0.8 2.8E-05 40.5 15.2 150 127-298 140-300 (433)
276 3m0c_C LDL receptor, low-densi 95.1 2.5 8.6E-05 40.6 20.0 119 126-261 471-591 (791)
277 3tc9_A Hypothetical hydrolase; 95.0 1 3.5E-05 39.8 15.6 121 124-259 177-301 (430)
278 1k3i_A Galactose oxidase precu 94.9 1 3.5E-05 42.2 16.0 117 129-261 189-325 (656)
279 1n7d_A LDL receptor, low-densi 94.8 0.08 2.7E-06 50.2 8.3 117 128-261 455-573 (699)
280 1yiq_A Quinohemoprotein alcoho 94.8 0.11 3.8E-06 49.1 9.2 83 148-248 455-538 (689)
281 2p9w_A MAL S 1 allergenic prot 94.6 0.41 1.4E-05 40.6 11.2 115 128-259 65-215 (334)
282 2p4o_A Hypothetical protein; p 94.5 1.8 6.2E-05 35.9 17.6 150 124-287 70-225 (306)
283 2p4o_A Hypothetical protein; p 94.4 1.9 6.4E-05 35.8 19.2 126 114-259 20-147 (306)
284 3s94_A LRP-6, low-density lipo 94.1 3.7 0.00013 38.1 19.2 145 123-285 37-182 (619)
285 2xbg_A YCF48-like protein; pho 93.8 2.6 9E-05 35.4 15.6 148 126-295 122-272 (327)
286 3s94_A LRP-6, low-density lipo 93.6 4.7 0.00016 37.5 18.3 139 127-284 350-489 (619)
287 1flg_A Protein (quinoprotein e 93.5 1.4 4.8E-05 40.6 13.7 76 200-286 465-541 (582)
288 1cru_A Protein (soluble quinop 93.3 2.3 8E-05 37.8 14.3 115 123-247 24-162 (454)
289 1kv9_A Type II quinohemoprotei 93.3 0.94 3.2E-05 42.6 12.3 61 200-271 437-497 (668)
290 2ad6_A Methanol dehydrogenase 93.0 0.8 2.7E-05 42.2 11.1 76 200-286 443-519 (571)
291 2ism_A Putative oxidoreductase 92.8 1.7 5.7E-05 37.2 12.2 109 126-247 31-153 (352)
292 3v9f_A Two-component system se 92.8 7 0.00024 37.3 19.2 146 126-297 450-607 (781)
293 1tl2_A L10, protein (tachylect 92.7 1.2 4.1E-05 35.4 10.1 148 126-287 41-195 (236)
294 3sre_A PON1, serum paraoxonase 92.6 4.4 0.00015 34.7 17.0 158 126-300 50-250 (355)
295 3v9f_A Two-component system se 92.6 5.6 0.00019 37.9 16.8 136 126-287 363-508 (781)
296 3a9g_A Putative uncharacterize 92.4 4.7 0.00016 34.4 15.7 111 124-247 27-153 (354)
297 1kv9_A Type II quinohemoprotei 92.3 1 3.5E-05 42.4 10.9 73 130-213 234-336 (668)
298 2g8s_A Glucose/sorbosone dehyd 91.4 2.6 8.8E-05 36.1 11.7 149 126-287 18-211 (353)
299 1tl2_A L10, protein (tachylect 90.4 1.4 4.7E-05 35.0 8.1 145 139-295 5-156 (236)
300 4hw6_A Hypothetical protein, I 90.3 9 0.00031 33.7 16.8 116 128-258 275-432 (433)
301 3das_A Putative oxidoreductase 89.0 9.9 0.00034 32.4 16.8 114 124-247 30-158 (347)
302 3kya_A Putative phosphatase; s 88.7 9.3 0.00032 34.3 13.3 124 127-259 187-341 (496)
303 1w6s_A Methanol dehydrogenase 88.5 4.8 0.00016 37.3 11.7 76 200-286 452-528 (599)
304 4a0p_A LRP6, LRP-6, low-densit 88.5 16 0.00054 34.0 21.3 140 126-285 340-488 (628)
305 3amr_A 3-phytase; beta-propell 88.4 11 0.00038 32.1 14.7 127 126-258 128-262 (355)
306 2ism_A Putative oxidoreductase 87.3 4.5 0.00015 34.5 10.2 102 178-287 30-148 (352)
307 2ad6_A Methanol dehydrogenase 87.2 18 0.0006 33.2 15.2 57 248-308 442-502 (571)
308 3ei3_A DNA damage-binding prot 86.3 29 0.001 34.9 18.6 123 113-259 873-999 (1158)
309 1k3i_A Galactose oxidase precu 85.9 4.9 0.00017 37.5 10.4 117 182-306 189-327 (656)
310 3sre_A PON1, serum paraoxonase 85.6 16 0.00055 31.2 22.2 152 115-287 152-327 (355)
311 3das_A Putative oxidoreductase 84.7 12 0.00042 31.8 11.4 106 177-287 30-153 (347)
312 1cru_A Protein (soluble quinop 83.7 14 0.0005 32.6 11.9 105 178-287 26-157 (454)
313 3a9g_A Putative uncharacterize 81.7 7.3 0.00025 33.2 8.9 101 179-287 29-148 (354)
314 1flg_A Protein (quinoprotein e 80.9 5.5 0.00019 36.7 8.3 50 193-248 499-549 (582)
315 3amr_A 3-phytase; beta-propell 79.5 28 0.00097 29.6 11.8 129 140-287 42-194 (355)
316 2g8s_A Glucose/sorbosone dehyd 77.2 32 0.0011 29.1 15.8 69 228-300 271-350 (353)
317 2wg3_C Hedgehog-interacting pr 75.7 34 0.0012 30.4 11.6 60 179-238 14-79 (463)
318 2xn4_A Kelch-like protein 2; s 73.0 30 0.001 28.1 10.1 62 193-261 207-278 (302)
319 2zwa_A Leucine carboxyl methyl 72.8 60 0.0021 30.5 13.1 111 136-261 451-579 (695)
320 1w6s_A Methanol dehydrogenase 71.9 62 0.0021 29.8 15.9 21 193-213 325-345 (599)
321 2vpj_A Kelch-like protein 12; 69.5 43 0.0015 27.1 14.1 105 139-261 161-280 (301)
322 1zgk_A Kelch-like ECH-associat 68.7 30 0.001 28.3 9.2 105 139-261 123-242 (308)
323 2vpj_A Kelch-like protein 12; 68.6 45 0.0015 26.9 13.3 105 139-261 114-233 (301)
324 2xzh_A Clathrin heavy chain 1; 67.7 57 0.0019 27.7 14.4 118 132-274 73-200 (365)
325 2xn4_A Kelch-like protein 2; s 65.9 52 0.0018 26.6 12.5 105 139-261 110-231 (302)
326 3ii7_A Kelch-like protein 7; p 62.6 43 0.0015 27.2 9.0 21 241-261 202-227 (306)
327 3b7f_A Glycosyl hydrolase, BNR 61.9 74 0.0025 27.0 10.7 27 180-206 116-143 (394)
328 1zgk_A Kelch-like ECH-associat 61.6 45 0.0015 27.2 8.9 62 139-211 170-241 (308)
329 3ii7_A Kelch-like protein 7; p 59.3 70 0.0024 25.9 12.3 62 193-261 203-274 (306)
330 4asc_A Kelch repeat and BTB do 55.3 41 0.0014 27.6 7.6 62 139-211 150-222 (315)
331 3sbq_A Nitrous-oxide reductase 54.0 44 0.0015 30.6 7.7 90 119-210 316-408 (638)
332 4gq2_M Nucleoporin NUP120; bet 53.7 65 0.0022 31.6 9.7 32 180-212 237-268 (950)
333 2be1_A Serine/threonine-protei 52.6 23 0.0008 29.9 5.6 111 139-269 11-137 (339)
334 3sbq_A Nitrous-oxide reductase 52.2 63 0.0021 29.7 8.4 80 179-259 323-408 (638)
335 2wg3_C Hedgehog-interacting pr 47.5 1.5E+02 0.0051 26.2 15.4 116 126-249 14-159 (463)
336 1xi4_A Clathrin heavy chain; a 46.8 1.4E+02 0.0047 31.1 10.6 109 132-261 72-190 (1630)
337 2zwa_A Leucine carboxyl methyl 45.8 86 0.003 29.4 8.9 115 136-261 500-637 (695)
338 1sqj_A OXG-RCBH, oligoxylogluc 45.3 78 0.0027 30.2 8.6 116 125-250 14-143 (789)
339 3b7f_A Glycosyl hydrolase, BNR 44.8 1.4E+02 0.0049 25.2 11.0 68 179-250 177-254 (394)
340 1bpo_A Protein (clathrin); cla 44.1 1.7E+02 0.0059 25.9 14.9 121 131-276 71-201 (494)
341 2uvk_A YJHT; unknown function, 44.0 61 0.0021 27.0 7.0 11 251-261 286-296 (357)
342 2cn3_A Xyloglucanase, beta-1,4 43.7 81 0.0028 29.8 8.4 113 126-248 23-152 (737)
343 2uvk_A YJHT; unknown function, 41.1 80 0.0027 26.2 7.4 54 202-262 286-345 (357)
344 1xi4_A Clathrin heavy chain; a 40.0 3.5E+02 0.012 28.3 12.2 124 127-262 152-292 (1630)
345 1bpo_A Protein (clathrin); cla 38.0 2.2E+02 0.0074 25.3 21.0 139 126-279 151-306 (494)
346 4gq2_M Nucleoporin NUP120; bet 35.9 3.2E+02 0.011 26.7 15.0 33 229-262 237-269 (950)
347 2woz_A Kelch repeat and BTB do 30.4 2.2E+02 0.0074 23.0 8.8 21 241-261 111-138 (318)
348 3ott_A Two-component system se 28.5 3.7E+02 0.013 25.1 17.4 143 127-298 473-623 (758)
349 4asc_A Kelch repeat and BTB do 28.1 2.4E+02 0.0081 22.7 9.6 16 140-157 7-22 (315)
350 3s25_A Hypothetical 7-bladed b 28.1 2.5E+02 0.0084 23.0 9.3 103 130-258 108-213 (302)
351 3ott_A Two-component system se 27.5 3.8E+02 0.013 25.0 17.3 139 126-293 146-299 (758)
352 3ei3_A DNA damage-binding prot 26.5 5E+02 0.017 26.1 20.5 86 115-210 543-636 (1158)
353 4fhn_B Nucleoporin NUP120; pro 25.8 55 0.0019 32.8 4.2 30 181-211 240-269 (1139)
354 4fhn_B Nucleoporin NUP120; pro 24.9 48 0.0016 33.3 3.5 33 229-262 239-271 (1139)
355 2xzh_A Clathrin heavy chain 1; 23.4 3.4E+02 0.012 23.0 20.0 140 126-280 152-308 (365)
356 3zwu_A Alkaline phosphatase PH 21.5 4.6E+02 0.016 24.0 9.0 60 181-247 478-550 (592)
357 3f7f_A Nucleoporin NUP120; nuc 21.4 1.6E+02 0.0054 27.9 5.9 30 180-212 223-252 (729)
358 3f7f_A Nucleoporin NUP120; nuc 21.3 1.1E+02 0.0036 29.0 4.8 23 240-262 231-253 (729)
359 2woz_A Kelch repeat and BTB do 20.1 3.4E+02 0.012 21.8 10.7 21 241-261 160-186 (318)
No 1
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.5e-45 Score=333.20 Aligned_cols=299 Identities=59% Similarity=0.998 Sum_probs=232.9
Q ss_pred chhhhhhhhhhhhhhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEE
Q 020480 3 KDEEEMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLML 82 (325)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i 82 (325)
+.||++++..++..++||+|+||+|+|++|++++.|.++||+++++|+|+.....+..+..+++++||++.. ..|.|++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~wk~n~~~~y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~~~~~~~GT~t~~-~~n~i~i 85 (430)
T 2xyi_A 7 NAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTKQDGKDYSVHRLILGTHTSD-EQNHLLI 85 (430)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECSSCCSCEEECSCCEECTTCSCEEEEEEEECCCSS-SCEEEEE
T ss_pred ccccccccchhhhhhhHHHhhHhhCChHHHHHHhhcCCCCCceEEEECcccccccCCCcceEEEEEEEcCCC-CCCEEEE
Confidence 456666777889999999999999999999999999999999999999998766677788899999999987 8999999
Q ss_pred EEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCC
Q 020480 83 AQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP 162 (325)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~ 162 (325)
+++.+|......+...++++.+++..+....++++....+.|.+.|++++|+|+++.+||+|+.+|.|++|++.......
T Consensus 86 ~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~ 165 (430)
T 2xyi_A 86 ASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKP 165 (430)
T ss_dssp EEEEEC--------------------------CEEEEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSC
T ss_pred EEEECCCCccccccccccccccccccccCCCCceEEEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCccccc
Confidence 99998866554455556667777777777888999888999999999999999855899999999999999997532222
Q ss_pred CCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCC-CcccceEeeecCCccEEEEEeecCCCc
Q 020480 163 PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN-KSLEAMQIFKVHEGVVEDVAWHLRHEY 241 (325)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~v~~v~~~p~~~~ 241 (325)
...+...+...+.+|...|++++|+|++.++|++|+.||.|++||+...... ..+.+...+.+|...|.+++|+|.+..
T Consensus 166 ~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 166 EPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHES 245 (430)
T ss_dssp CTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTT
T ss_pred CccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCC
Confidence 2223356788899999999999999998878999999999999999874321 122235567789999999999996678
Q ss_pred EEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC--c-cCCCCceEEeeecce
Q 020480 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR--L-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 242 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~--~-~~~~d~~~~~~~~~~ 302 (325)
+|++++.||.|++||+++....+++..+..|...|++++|+|++. + +++.|+++++|+++.
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~ 309 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRN 309 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCC
Confidence 999999999999999998753346788889999999999999886 3 889999999999875
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=4.5e-30 Score=224.95 Aligned_cols=203 Identities=17% Similarity=0.225 Sum_probs=164.2
Q ss_pred CCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEE
Q 020480 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (325)
Q Consensus 41 ~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (325)
..++.+++|+|+. .++.|+. +..|++|++.-. .........
T Consensus 82 ~~~v~~~~~s~d~-----------~l~~~s~-----dg~v~lWd~~~~-----------------------~~~~~~~~~ 122 (344)
T 4gqb_B 82 EAGVADLTWVGER-----------GILVASD-----SGAVELWELDEN-----------------------ETLIVSKFC 122 (344)
T ss_dssp SSCEEEEEEETTT-----------EEEEEET-----TSEEEEEEECTT-----------------------SSCEEEEEE
T ss_pred CCCEEEEEEeCCC-----------eEEEEEC-----CCEEEEEeccCC-----------------------CceeEeecc
Confidence 4568899999974 4666654 348999988411 011122233
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
..+|.+.|++++|+|++ ++|++|+.||.|++||+.+ ...+..+.+|...|.+++|+|++..+|++|+.|
T Consensus 123 ~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~----------~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D 191 (344)
T 4gqb_B 123 KYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQ----------QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSED 191 (344)
T ss_dssp EECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEECSSCTTEEEEEETT
T ss_pred ccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEEcCcCCceEEEEecCCCCCceeeeccc
Confidence 55899999999999998 7999999999999999987 455788999999999999999997789999999
Q ss_pred CcEEEEeCCCCCCCCcccceEee--ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeE
Q 020480 201 AQICLWDINAAPKNKSLEAMQIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 278 (325)
++|++||++.++. ...+ ..+...+.+++|+|++..+|++|+.||+|++||+++++. +..+.+|...|++
T Consensus 192 ~~v~iwd~~~~~~------~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~---~~~~~~h~~~v~~ 262 (344)
T 4gqb_B 192 NRILLWDTRCPKP------ASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSC---VLSSAVHSQCVTG 262 (344)
T ss_dssp SCEEEEETTSSSC------EEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--C---CEEEECCSSCEEE
T ss_pred cccccccccccce------eeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcE---EEEEcCCCCCEEE
Confidence 9999999998743 3333 345667999999998778999999999999999999884 8899999999999
Q ss_pred EEeCCCCC-c--cCCCCceEEeeecce
Q 020480 279 SILNASFR-L--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 279 i~~~p~~~-~--~~~~d~~~~~~~~~~ 302 (325)
++|+|++. + +++.|+++++|+.+.
T Consensus 263 v~fsp~g~~~lasgs~D~~i~vwd~~~ 289 (344)
T 4gqb_B 263 LVFSPHSVPFLASLSEDCSLAVLDSSL 289 (344)
T ss_dssp EEECSSSSCCEEEEETTSCEEEECTTC
T ss_pred EEEccCCCeEEEEEeCCCeEEEEECCC
Confidence 99999984 3 789999999998754
No 3
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=1.3e-30 Score=228.33 Aligned_cols=222 Identities=13% Similarity=0.134 Sum_probs=175.2
Q ss_pred hHHHHhhhHhcChhHHHH----hhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCC
Q 020480 17 INEEYKIWKKNTPFLYDL----VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~----~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 92 (325)
.+.+||||+.+.+..... +..|. -++.+++|+|++. .++.|+.. ..|++|++.
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~--~~V~~v~~spdg~----------~l~sgs~d-----~~i~iwd~~------ 157 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHD--DIVSTVSVLSSGT----------QAVSGSKD-----ICIKVWDLA------ 157 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCS--SCEEEEEECTTSS----------EEEEEETT-----SCEEEEETT------
T ss_pred CCCEEEEEeccCCCceeEeeccccCCC--CCEEEEEECCCCC----------EEEEEeCC-----CeEEEEECC------
Confidence 567899999887654322 22344 3589999999874 56666543 368888652
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 172 (325)
.++ ......+|.+.|++++|++++..+|++|+.||.|++||++. .++..
T Consensus 158 --------------------~~~-~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~----------~~~~~ 206 (344)
T 4gqb_B 158 --------------------QQV-VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC----------PKPAS 206 (344)
T ss_dssp --------------------TTE-EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS----------SSCEE
T ss_pred --------------------CCc-EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc----------cceee
Confidence 122 22334579999999999999877999999999999999987 23344
Q ss_pred EE--ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC
Q 020480 173 RL--RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (325)
Q Consensus 173 ~~--~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg 250 (325)
.+ ..|...+.+++|+|++..+|++|+.||.|++||++++ .++..+.+|...|++++|+|++..+||+|+.|+
T Consensus 207 ~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 207 QIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKST------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp ECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--------CCEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred eeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCC------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 44 3456679999999987768999999999999999987 457888999999999999999877899999999
Q ss_pred cEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC--c-cCCCCceEEeeecce
Q 020480 251 YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR--L-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 251 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~--~-~~~~d~~~~~~~~~~ 302 (325)
+|+|||+++++ +..+.+|.+.|++++|+|++. + ++|.|+++++|++..
T Consensus 281 ~i~vwd~~~~~----~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 281 SLAVLDSSLSE----LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp CEEEECTTCCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC
T ss_pred eEEEEECCCCc----EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCC
Confidence 99999998876 566789999999999999886 3 788999999998754
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=6.9e-30 Score=221.75 Aligned_cols=220 Identities=20% Similarity=0.259 Sum_probs=181.6
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..|.++|+|+.........+..+.. ++.+++|+|++. .++.|+. +..+.++++.
T Consensus 99 s~D~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~spdg~----------~l~~g~~-----dg~v~i~~~~--------- 152 (321)
T 3ow8_A 99 SLDAHIRLWDLENGKQIKSIDAGPV--DAWTLAFSPDSQ----------YLATGTH-----VGKVNIFGVE--------- 152 (321)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCTT--CCCCEEECTTSS----------EEEEECT-----TSEEEEEETT---------
T ss_pred eCCCcEEEEECCCCCEEEEEeCCCc--cEEEEEECCCCC----------EEEEEcC-----CCcEEEEEcC---------
Confidence 3578899999988765555544443 477899999874 4655553 3477777652
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
.++ .......|...|.+++|+|++ ++||+|+.||.|++||+.. .+.+..+.
T Consensus 153 -----------------~~~-~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~----------~~~~~~~~ 203 (321)
T 3ow8_A 153 -----------------SGK-KEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIAT----------GKLLHTLE 203 (321)
T ss_dssp -----------------TCS-EEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEEEEC
T ss_pred -----------------CCc-eeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCC----------CcEEEEEc
Confidence 111 122345688899999999998 7999999999999999987 34577888
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
+|...|.+++|+|++. +|++|+.|+.|++||++.+ .....+.+|...|.+++|+|++ .+|++|+.|++|++|
T Consensus 204 ~h~~~v~~l~~spd~~-~l~s~s~dg~i~iwd~~~~------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iw 275 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQ-LLVTASDDGYIKIYDVQHA------NLAGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVW 275 (321)
T ss_dssp CCSSCCCEEEECTTSC-EEEEECTTSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred ccCCceeEEEEcCCCC-EEEEEcCCCeEEEEECCCc------ceeEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEE
Confidence 9999999999999998 8999999999999999876 4577888999999999999987 689999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
|++++++ +..+.+|...|.+++|+|++.. +++.|+++++|+..
T Consensus 276 d~~~~~~---~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 276 DVGTRTC---VHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ETTTTEE---EEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred eCCCCEE---EEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 9998874 8888999999999999999874 88999999999864
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=7.6e-29 Score=218.34 Aligned_cols=226 Identities=13% Similarity=0.140 Sum_probs=170.3
Q ss_pred hHHHHhhhHhcChhHHHHh--hhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKNTPFLYDLV--ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~--~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+.++|||+...+...... ..+...-++.+++|+|++. .++.|... ..|++|++.
T Consensus 113 ~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~----------~l~sgs~d-----g~v~iwd~~-------- 169 (357)
T 4g56_B 113 DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGT----------QAVSGGKD-----FSVKVWDLS-------- 169 (357)
T ss_dssp TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSS----------EEEEEETT-----SCEEEEETT--------
T ss_pred CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCC----------EEEEEeCC-----CeEEEEECC--------
Confidence 4568999998776433221 1122334689999999874 46566543 368888642
Q ss_pred ccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 95 DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
.++ .......|.+.|++++|++++..++++++.||.|++||++. +.......+
T Consensus 170 ------------------~~~-~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~--------~~~~~~~~~ 222 (357)
T 4g56_B 170 ------------------QKA-VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRK--------PKPATRIDF 222 (357)
T ss_dssp ------------------TTE-EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTS--------SSCBCBCCC
T ss_pred ------------------CCc-EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCC--------Cceeeeeee
Confidence 122 22234569999999999998877899999999999999987 222222334
Q ss_pred ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEE
Q 020480 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (325)
Q Consensus 175 ~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~i 254 (325)
..|...+.+++|+|++..+|++|+.|+.|++||++.+ .++..+.+|...|++++|+|++..+||+|+.|++|+|
T Consensus 223 ~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~i 296 (357)
T 4g56_B 223 CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAV 296 (357)
T ss_dssp TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEE
T ss_pred ccccccccchhhhhcccceEEEeecccceeEEECCCC------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEE
Confidence 4677889999999987768999999999999999876 4577888999999999999998778999999999999
Q ss_pred EEccCCCCCCCeeEeeccCCCeeEEEeCC-CCCc--cCCCCceEEeeecce
Q 020480 255 WDLRTPSVSKPVQSVVAHQSEVGVSILNA-SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~~~v~~i~~~p-~~~~--~~~~d~~~~~~~~~~ 302 (325)
||+++++ +....+|...|++|+|+| ++.+ +++.|+++++|++..
T Consensus 297 wd~~~~~----~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 297 LDADFSE----VFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp ECTTSCE----EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EECCCCc----EeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 9999876 344457999999999998 6663 889999999998754
No 6
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.6e-28 Score=218.91 Aligned_cols=220 Identities=20% Similarity=0.251 Sum_probs=182.2
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..|.++++|+.+...+...+..|.. ++.+++|.|++. .++.|+. +..|.+|++.
T Consensus 169 s~D~~i~iwd~~~~~~~~~~~~h~~--~V~~v~~~p~~~----------~l~s~s~-----D~~i~~wd~~--------- 222 (410)
T 1vyh_C 169 SADMTIKLWDFQGFECIRTMHGHDH--NVSSVSIMPNGD----------HIVSASR-----DKTIKMWEVQ--------- 222 (410)
T ss_dssp ETTSCCCEEETTSSCEEECCCCCSS--CEEEEEECSSSS----------EEEEEET-----TSEEEEEETT---------
T ss_pred eCCCeEEEEeCCCCceeEEEcCCCC--CEEEEEEeCCCC----------EEEEEeC-----CCeEEEEECC---------
Confidence 3567899999988776666666654 488999999864 4555554 3478888652
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
.+. ......+|...|.++.|+|++ .+|++|+.||.|++||+.. ......+.
T Consensus 223 -----------------~~~-~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~----------~~~~~~~~ 273 (410)
T 1vyh_C 223 -----------------TGY-CVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVAT----------KECKAELR 273 (410)
T ss_dssp -----------------TCC-EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------CCEEEEEC
T ss_pred -----------------CCc-EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCC----------CceeeEec
Confidence 111 122345799999999999998 7999999999999999987 34466788
Q ss_pred cCCCceEEEEecCC--------------------CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEe
Q 020480 176 GHSTEGYGLSWSKF--------------------KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235 (325)
Q Consensus 176 ~h~~~v~~l~~~p~--------------------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 235 (325)
+|...|.+++|+|+ +. +|++|+.|+.|++||++.+ .++..+.+|...|.+++|
T Consensus 274 ~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~l~sgs~D~~i~iwd~~~~------~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 274 EHRHVVECISWAPESSYSSISEATGSETKKSGKPGP-FLLSGSRDKTIKMWDVSTG------MCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp CCSSCEEEEEECCSCGGGGGGGCCSCC-------CC-EEEEEETTSEEEEEETTTT------EEEEEEECCSSCEEEEEE
T ss_pred CCCceEEEEEEcCcccccchhhhccccccccCCCCC-EEEEEeCCCeEEEEECCCC------ceEEEEECCCCcEEEEEE
Confidence 99999999999996 44 8999999999999999987 567888999999999999
Q ss_pred ecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 236 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+|++ .+|++|+.||.|++||+++++. +..+.+|...|++++|+|++.+ +++.|+++++|+.+
T Consensus 347 ~~~g-~~l~s~s~D~~i~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 347 HSGG-KFILSCADDKTLRVWDYKNKRC---MKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp CSSS-SCEEEEETTTEEEEECCTTSCC---CEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred cCCC-CEEEEEeCCCeEEEEECCCCce---EEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 9987 6888999999999999998874 8888999999999999999874 89999999999864
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=5.3e-28 Score=208.16 Aligned_cols=225 Identities=15% Similarity=0.254 Sum_probs=177.9
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..+.++++|+..+......+..|. -++.+++|.|+.. .++.|+. +..|.+|++.
T Consensus 32 ~~dg~v~lWd~~~~~~~~~~~~~~--~~v~~~~~~~~~~----------~l~s~s~-----d~~i~vwd~~--------- 85 (304)
T 2ynn_A 32 LYSGRVELWNYETQVEVRSIQVTE--TPVRAGKFIARKN----------WIIVGSD-----DFRIRVFNYN--------- 85 (304)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGT----------EEEEEET-----TSEEEEEETT---------
T ss_pred cCCCcEEEEECCCCceeEEeeccC--CcEEEEEEeCCCC----------EEEEECC-----CCEEEEEECC---------
Confidence 356789999998876555555554 4588999999874 4666654 3478888652
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
.++ ......+|.+.|++++|+|++ .+|++|+.||+|++||+.. + ......+.
T Consensus 86 -----------------~~~-~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~--------~-~~~~~~~~ 137 (304)
T 2ynn_A 86 -----------------TGE-KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------N-WALEQTFE 137 (304)
T ss_dssp -----------------TCC-EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGG--------T-TEEEEEEC
T ss_pred -----------------CCc-EEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCC--------C-cchhhhhc
Confidence 112 223345799999999999998 6999999999999999976 1 13345678
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC-CCcEEEEEecCCcEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR-HEYLFGSVGDDQYLLI 254 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~-~~~~l~s~~~dg~i~i 254 (325)
+|...|.+++|+|.+..+|++|+.|+.|++||++.... ......+|...+..++|+|. +..+|++|+.|++|++
T Consensus 138 ~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~-----~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~i 212 (304)
T 2ynn_A 138 GHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP-----NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKI 212 (304)
T ss_dssp CCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC-----SEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEE
T ss_pred ccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc-----cceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEE
Confidence 99999999999996544899999999999999987632 12233456678999999873 2368999999999999
Q ss_pred EEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 255 WDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
||++++++ +..+.+|...|.+++|+|++.+ +++.|+++++|+.+.
T Consensus 213 Wd~~~~~~---~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 213 WDYQTKSC---VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp EETTTTEE---EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EeCCCCcc---ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 99999874 8889999999999999999874 899999999999754
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=7.6e-28 Score=208.87 Aligned_cols=222 Identities=18% Similarity=0.174 Sum_probs=180.5
Q ss_pred hhhHHHHhhhHhcChhH--HHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCC
Q 020480 15 RLINEEYKIWKKNTPFL--YDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 15 ~~~~~~~~iw~~~~~~~--y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 92 (325)
...|.++|+|+.+.+.+ ...+..|.. ++.+++|.|+.. .++.++. +..|.+|++.
T Consensus 54 gs~D~~v~vW~~~~~~~~~~~~l~gh~~--~v~~~~~~~~~~----------~l~s~s~-----D~~i~lWd~~------ 110 (321)
T 3ow8_A 54 GSLDDLVKVWKWRDERLDLQWSLEGHQL--GVVSVDISHTLP----------IAASSSL-----DAHIRLWDLE------ 110 (321)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECSSSS----------EEEEEET-----TSEEEEEETT------
T ss_pred EcCCCCEEEEECCCCCeeeeeeeccCCC--CEEEEEECCCCC----------EEEEEeC-----CCcEEEEECC------
Confidence 34678899999876542 223444544 488999998764 3444443 3478888652
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 172 (325)
.++ .......|...+.+++|+|++ .+|++|+.+|.|++|++.. .....
T Consensus 111 --------------------~~~-~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~----------~~~~~ 158 (321)
T 3ow8_A 111 --------------------NGK-QIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVES----------GKKEY 158 (321)
T ss_dssp --------------------TTE-EEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTT----------CSEEE
T ss_pred --------------------CCC-EEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCC----------CceeE
Confidence 111 222334688899999999998 7999999999999999987 34466
Q ss_pred EEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcE
Q 020480 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (325)
Q Consensus 173 ~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i 252 (325)
.+..|...+.+++|+|++. +|++|+.||.|++||++++ .++..+.+|...|.+++|+|++ .+|++|+.|+.|
T Consensus 159 ~~~~~~~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~------~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i 230 (321)
T 3ow8_A 159 SLDTRGKFILSIAYSPDGK-YLASGAIDGIINIFDIATG------KLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYI 230 (321)
T ss_dssp EEECSSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTT------EEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCE
T ss_pred EecCCCceEEEEEECCCCC-EEEEEcCCCeEEEEECCCC------cEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeE
Confidence 7888999999999999998 8999999999999999876 5677889999999999999987 699999999999
Q ss_pred EEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 253 ~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++||++... .+..+.+|...|.+++|+|++.+ +++.|+++++|+++.
T Consensus 231 ~iwd~~~~~---~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~ 279 (321)
T 3ow8_A 231 KIYDVQHAN---LAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGT 279 (321)
T ss_dssp EEEETTTCC---EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEECCCcc---eeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999887 37888999999999999999984 889999999999753
No 9
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=5.8e-28 Score=216.64 Aligned_cols=221 Identities=16% Similarity=0.175 Sum_probs=182.8
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.|.+++||+..+..+...+..|... +.+++|.|++. .++.|+.. ..|.+|++.
T Consensus 128 ~Dg~i~vwd~~~~~~~~~l~~h~~~--V~~v~~~~~~~----------~l~sgs~D-----~~i~iwd~~---------- 180 (410)
T 1vyh_C 128 EDATIKVWDYETGDFERTLKGHTDS--VQDISFDHSGK----------LLASCSAD-----MTIKLWDFQ---------- 180 (410)
T ss_dssp SSSCEEEEETTTCCCCEEECCCSSC--EEEEEECTTSS----------EEEEEETT-----SCCCEEETT----------
T ss_pred CCCeEEEEECCCCcEEEEEeccCCc--EEEEEEcCCCC----------EEEEEeCC-----CeEEEEeCC----------
Confidence 4678999999887766666666654 88999999764 46566543 357777642
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
... ......+|...|.+++|+|++ .+|++|+.|+.|++||+.. ...+..+.+
T Consensus 181 ----------------~~~-~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~----------~~~~~~~~~ 232 (410)
T 1vyh_C 181 ----------------GFE-CIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQT----------GYCVKTFTG 232 (410)
T ss_dssp ----------------SSC-EEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTT----------CCEEEEEEC
T ss_pred ----------------CCc-eeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEEeC
Confidence 111 112234699999999999988 7999999999999999987 345778899
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-----------------
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH----------------- 239 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----------------- 239 (325)
|...|.++.|+|++. ++++|+.|+.|++||++.+ .+...+.+|...|.+++|+|++
T Consensus 233 h~~~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 233 HREWVRMVRPNQDGT-LIASCSNDQTVRVWVVATK------ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred CCccEEEEEECCCCC-EEEEEcCCCeEEEEECCCC------ceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 999999999999998 8999999999999999876 4577788999999999999962
Q ss_pred --CcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 240 --EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 240 --~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
..+|++|+.|++|++||++++.+ +..+.+|...|++++|+|+|.+ +++.|+++++|+.+.
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~---~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMC---LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEE---EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTT
T ss_pred CCCCEEEEEeCCCeEEEEECCCCce---EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 25899999999999999999874 8888999999999999999985 889999999998753
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=2.4e-27 Score=207.72 Aligned_cols=205 Identities=16% Similarity=0.229 Sum_probs=165.4
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
+++.++|+|++. .++.|.. +..|.+|++.-. ..........
T Consensus 18 ~v~~l~~sp~g~----------~las~~~-----D~~i~iw~~~~~------------------------~~~~~~~~~~ 58 (345)
T 3fm0_A 18 RCWFLAWNPAGT----------LLASCGG-----DRRIRIWGTEGD------------------------SWICKSVLSE 58 (345)
T ss_dssp CEEEEEECTTSS----------CEEEEET-----TSCEEEEEEETT------------------------EEEEEEEECS
T ss_pred cEEEEEECCCCC----------EEEEEcC-----CCeEEEEEcCCC------------------------cceeeeeecc
Confidence 588999999875 4555554 347999987511 0011222224
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
+|.+.|.+++|+|++ ++||+|+.|+.|++|++.. +....+..+.+|...|.+++|+|++. +|++|+.|+.
T Consensus 59 ~h~~~v~~~~~sp~g-~~l~s~s~D~~v~iw~~~~--------~~~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~ 128 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCG-NYLASASFDATTCIWKKNQ--------DDFECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKS 128 (345)
T ss_dssp SCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECC--------C-EEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred ccCCcEEEEEECCCC-CEEEEEECCCcEEEEEccC--------CCeEEEEEccCCCCCceEEEEeCCCC-EEEEEECCCe
Confidence 699999999999998 7999999999999999876 33344667889999999999999998 8999999999
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeC
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~ 282 (325)
|++||++.... ..++..+.+|...|.+++|+|++ .+|++|+.|+.|++||++.... .....+.+|...|++++|+
T Consensus 129 v~iwd~~~~~~---~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~-~~~~~~~~h~~~v~~l~~s 203 (345)
T 3fm0_A 129 VWVWEVDEEDE---YECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDW-VCCATLEGHESTVWSLAFD 203 (345)
T ss_dssp EEEEEECTTSC---EEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEEC
T ss_pred EEEEECCCCCC---eEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCE-EEEEEecCCCCceEEEEEC
Confidence 99999986532 13466778899999999999987 6899999999999999987652 1346778999999999999
Q ss_pred CCCCc--cCCCCceEEeeecc
Q 020480 283 ASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 283 p~~~~--~~~~d~~~~~~~~~ 301 (325)
|+|.+ +++.|+++++|+..
T Consensus 204 p~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 204 PSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp TTSSEEEEEETTSCEEEEEEE
T ss_pred CCCCEEEEEeCCCeEEEeccc
Confidence 99984 88999999999853
No 11
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=5e-27 Score=205.25 Aligned_cols=222 Identities=19% Similarity=0.263 Sum_probs=176.2
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.|.+++||+.........+..|.. ++.+++|.|++. .++.|.. ++.+.+|++.-.
T Consensus 75 ~Dg~v~iWd~~~~~~~~~~~~~~~--~v~~~~~s~~~~----------~l~s~~~-----d~~v~iw~~~~~-------- 129 (340)
T 1got_B 75 QDGKLIIWDSYTTNKVHAIPLRSS--WVMTCAYAPSGN----------YVACGGL-----DNICSIYNLKTR-------- 129 (340)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSS--CEEEEEECTTSS----------EEEEEET-----TCEEEEEETTTC--------
T ss_pred CCCcEEEEECCCCCcceEeecCCc--cEEEEEECCCCC----------EEEEEeC-----CCeEEEEECccC--------
Confidence 567899999877655444444443 488999999864 4555554 347888865311
Q ss_pred CCCCcccCCCCCCCCCCCceE-EEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 97 RHYDDDRSDFGGFGCANGKVQ-IIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
.+... .....+|.+.|.++.|++++ .+++|+.|+.|++||+.. ...+..+.
T Consensus 130 ----------------~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~----------~~~~~~~~ 181 (340)
T 1got_B 130 ----------------EGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIET----------GQQTTTFT 181 (340)
T ss_dssp ----------------SBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTT----------TEEEEEEC
T ss_pred ----------------CCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCC----------CcEEEEEc
Confidence 11122 22345799999999999876 588999999999999987 34567888
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
+|...|.+++|+|++. ++++|+.|+.|++||++.+ .+...+.+|...|.+++|+|++ .+|++|+.||+|++|
T Consensus 182 ~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iw 253 (340)
T 1got_B 182 GHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREG------MCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLF 253 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC------SEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEE
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCC------eeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEE
Confidence 9999999999999998 8999999999999999876 4677889999999999999987 699999999999999
Q ss_pred EccCCCCCCCeeEee--ccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVV--AHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
|++.... +..+. .+...|.+++|+|+|.+ +++.|+.+++|+...
T Consensus 254 d~~~~~~---~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~ 301 (340)
T 1got_B 254 DLRADQE---LMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALK 301 (340)
T ss_dssp ETTTTEE---EEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ECCCCcE---EEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEccc
Confidence 9998763 44443 23457999999999985 889999999998643
No 12
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=3.5e-27 Score=202.33 Aligned_cols=234 Identities=16% Similarity=0.245 Sum_probs=174.0
Q ss_pred hhHHHHhhhHhcC--hhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCC
Q 020480 16 LINEEYKIWKKNT--PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSE 93 (325)
Q Consensus 16 ~~~~~~~iw~~~~--~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~ 93 (325)
..|.++|||+.+. ..+...+..|.. ++.+++|.|.... ..++.|+. +..+++|++.-
T Consensus 28 s~D~~v~iw~~~~~~~~~~~~l~gH~~--~V~~v~~s~~~~g--------~~l~s~s~-----D~~v~iWd~~~------ 86 (297)
T 2pm7_B 28 SSDKTIKIFEVEGETHKLIDTLTGHEG--PVWRVDWAHPKFG--------TILASCSY-----DGKVMIWKEEN------ 86 (297)
T ss_dssp ETTSCEEEEEBCSSCBCCCEEECCCSS--CEEEEEECCGGGC--------SEEEEEET-----TTEEEEEEBSS------
T ss_pred eCCCEEEEEecCCCCcEEEEEEccccC--CeEEEEecCCCcC--------CEEEEEcC-----CCEEEEEEcCC------
Confidence 3578899999864 234445556654 5899999874211 24555554 34789997631
Q ss_pred cccCCCCcccCCCCCCCCCCCce-EEEEEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCC
Q 020480 94 NDARHYDDDRSDFGGFGCANGKV-QIIQQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP 170 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~ 170 (325)
++. .......|...|.+++|+|+ + .+|++|+.||.|++||++. .....
T Consensus 87 --------------------~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~--------~~~~~ 137 (297)
T 2pm7_B 87 --------------------GRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKE--------NGTTS 137 (297)
T ss_dssp --------------------SCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCS--------SSCBC
T ss_pred --------------------CceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecC--------CCcee
Confidence 111 11223469999999999997 5 6999999999999999976 21122
Q ss_pred cEEEecCCCceEEEEecCCC------------CCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC
Q 020480 171 DLRLRGHSTEGYGLSWSKFK------------EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238 (325)
Q Consensus 171 ~~~~~~h~~~v~~l~~~p~~------------~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 238 (325)
...+.+|...|.+++|+|++ ..+|++|+.|+.|++||++.+... ......+.+|...|.+++|+|+
T Consensus 138 ~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~--~~~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 138 PIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT--YVLESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp CEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE--EEEEEEECCCSSCEEEEEECCC
T ss_pred eeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce--EEEEEEecCCCCceEEEEECCC
Confidence 45678999999999999973 238999999999999999875321 1245678899999999999998
Q ss_pred C--CcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 239 H--EYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 239 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+ ..+||+|+.|++|++||++..........+ ..|...|.+++|+|+|.+ +++.|+++++|+..
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 5 479999999999999999875421112223 467889999999999985 78899999999865
No 13
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=4.7e-26 Score=195.33 Aligned_cols=207 Identities=16% Similarity=0.176 Sum_probs=161.9
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
++.+++|+|++. .++.|+. +..+++|++.-. ..+. .....
T Consensus 11 ~V~~~~~s~~g~----------~las~s~-----D~~v~iw~~~~~------------------------~~~~-~~~l~ 50 (297)
T 2pm7_B 11 MIHDAVMDYYGK----------RMATCSS-----DKTIKIFEVEGE------------------------THKL-IDTLT 50 (297)
T ss_dssp CEEEEEECTTSS----------EEEEEET-----TSCEEEEEBCSS------------------------CBCC-CEEEC
T ss_pred ceEEEEECCCCC----------EEEEEeC-----CCEEEEEecCCC------------------------CcEE-EEEEc
Confidence 588999999874 5666654 347889876310 0011 12345
Q ss_pred ccCCCeeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC--CCCeEEEEeC
Q 020480 123 NHDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGSD 199 (325)
Q Consensus 123 ~h~~~v~~v~~~~~-~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~s~ 199 (325)
+|.+.|++++|++. ..++||+|+.||+|++||+.. +....+..+.+|...|.+++|+|+ +. +|++|+.
T Consensus 51 gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~--------~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~ 121 (297)
T 2pm7_B 51 GHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASS 121 (297)
T ss_dssp CCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS--------SCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred cccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC--------CceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEEC
Confidence 79999999999864 237999999999999999986 434556778899999999999997 66 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC------------CcEEEEEecCCcEEEEEccCCCCC-CCe
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH------------EYLFGSVGDDQYLLIWDLRTPSVS-KPV 266 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~-~~~ 266 (325)
|+.|++||++.... .....+.+|...|.+++|+|++ ..+|++|+.|++|++||++..... ...
T Consensus 122 d~~v~~wd~~~~~~----~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~ 197 (297)
T 2pm7_B 122 DGKVSVVEFKENGT----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (297)
T ss_dssp TSEEEEEEBCSSSC----BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred CCcEEEEEecCCCc----eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEE
Confidence 99999999987532 1234578899999999999963 258999999999999999976521 124
Q ss_pred eEeeccCCCeeEEEeCCCC---C--ccCCCCceEEeeecce
Q 020480 267 QSVVAHQSEVGVSILNASF---R--LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 267 ~~~~~h~~~v~~i~~~p~~---~--~~~~~d~~~~~~~~~~ 302 (325)
..+.+|...|.+++|+|++ . ++++.|+++++|+.+.
T Consensus 198 ~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 198 STLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 5678899999999999985 3 3889999999998753
No 14
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=6e-27 Score=204.74 Aligned_cols=216 Identities=15% Similarity=0.170 Sum_probs=168.9
Q ss_pred hHHHHhhhHhcChh----HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCC
Q 020480 17 INEEYKIWKKNTPF----LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 17 ~~~~~~iw~~~~~~----~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 92 (325)
.+..+++|+...+. +...+..|.. ++..+.|.|+. .++.++. +..+.+|++.
T Consensus 117 ~d~~v~iw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~-----------~l~s~s~-----d~~i~~wd~~------ 172 (340)
T 1got_B 117 LDNICSIYNLKTREGNVRVSRELAGHTG--YLSCCRFLDDN-----------QIVTSSG-----DTTCALWDIE------ 172 (340)
T ss_dssp TTCEEEEEETTTCSBSCEEEEEEECCSS--CEEEEEEEETT-----------EEEEEET-----TSCEEEEETT------
T ss_pred CCCeEEEEECccCCCcceeEEEecCCCc--cEEEEEECCCC-----------cEEEEEC-----CCcEEEEECC------
Confidence 45678888876532 2222334433 36678888764 3555543 3468888652
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 172 (325)
.++ ......+|.+.|.+++|+|++ .++++|+.||.|++||++. .....
T Consensus 173 --------------------~~~-~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~----------~~~~~ 220 (340)
T 1got_B 173 --------------------TGQ-QTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVRE----------GMCRQ 220 (340)
T ss_dssp --------------------TTE-EEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------CSEEE
T ss_pred --------------------CCc-EEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCC----------CeeEE
Confidence 112 222345799999999999988 7999999999999999987 34567
Q ss_pred EEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeee--cCCccEEEEEeecCCCcEEEEEecCC
Q 020480 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDDQ 250 (325)
Q Consensus 173 ~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~s~~~dg 250 (325)
.+.+|...|.+++|+|++. +|++|+.||.|++||++... .+..+. .+...|.+++|+|++ .+|++|+.||
T Consensus 221 ~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~v~iwd~~~~~------~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~ 292 (340)
T 1got_B 221 TFTGHESDINAICFFPNGN-AFATGSDDATCRLFDLRADQ------ELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDF 292 (340)
T ss_dssp EECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTE------EEEEECCTTCCSCEEEEEECTTS-SEEEEEETTS
T ss_pred EEcCCcCCEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCc------EEEEEccCCcccceEEEEECCCC-CEEEEECCCC
Confidence 8889999999999999998 89999999999999998762 333433 233579999999997 6999999999
Q ss_pred cEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeee
Q 020480 251 YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRH 299 (325)
Q Consensus 251 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~ 299 (325)
.|++||+++.. .+..+.+|..+|.+++|+|+|.+ +++.|+++++|+
T Consensus 293 ~i~vwd~~~~~---~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 293 NCNVWDALKAD---RAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTTCC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred eEEEEEcccCc---EeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 99999999877 47888999999999999999984 899999999996
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.95 E-value=7.1e-26 Score=194.86 Aligned_cols=205 Identities=16% Similarity=0.181 Sum_probs=164.4
Q ss_pred hhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCC
Q 020480 35 VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (325)
Q Consensus 35 ~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (325)
+..|.. ++.+++|+|++. .++.|.. +..+.+|++. .+
T Consensus 9 ~~~h~~--~V~~~~fsp~~~----------~l~s~~~-----dg~v~lWd~~--------------------------~~ 45 (304)
T 2ynn_A 9 FSNRSD--RVKGIDFHPTEP----------WVLTTLY-----SGRVELWNYE--------------------------TQ 45 (304)
T ss_dssp EEEECS--CEEEEEECSSSS----------EEEEEET-----TSEEEEEETT--------------------------TT
T ss_pred ecCCCC--ceEEEEECCCCC----------EEEEEcC-----CCcEEEEECC--------------------------CC
Confidence 334544 488999999874 5655554 3478888652 11
Q ss_pred ceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
........|..+|.+++|+|++ ++|++|+.|+.|++||+.. ...+..+.+|...|.+++|+|++. +|
T Consensus 46 -~~~~~~~~~~~~v~~~~~~~~~-~~l~s~s~d~~i~vwd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l 112 (304)
T 2ynn_A 46 -VEVRSIQVTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YV 112 (304)
T ss_dssp -EEEEEEECCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EE
T ss_pred -ceeEEeeccCCcEEEEEEeCCC-CEEEEECCCCEEEEEECCC----------CcEEEEEeCCCCcEEEEEEcCCCC-EE
Confidence 1223345689999999999988 7999999999999999987 355778899999999999999998 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
++|+.|++|++||++.+. .....+.+|...|.+++|+|.+..+|++|+.|++|++||++.... .......|..
T Consensus 113 ~sgs~D~~v~lWd~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~ 185 (304)
T 2ynn_A 113 LSGSDDLTVKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP--NFTLTTGQER 185 (304)
T ss_dssp EEEETTSCEEEEEGGGTT-----EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSC--SEEEECCCTT
T ss_pred EEECCCCeEEEEECCCCc-----chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCc--cceeccCCcC
Confidence 999999999999998653 245678899999999999996568999999999999999988764 2333345678
Q ss_pred CeeEEEeCC--CCC--ccCCCCceEEeeecce
Q 020480 275 EVGVSILNA--SFR--LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 275 ~v~~i~~~p--~~~--~~~~~d~~~~~~~~~~ 302 (325)
.+..++|+| ++. ++++.|+++++|+++.
T Consensus 186 ~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 217 (304)
T 2ynn_A 186 GVNYVDYYPLPDKPYMITASDDLTIKIWDYQT 217 (304)
T ss_dssp CEEEEEECCSTTCCEEEEEETTSEEEEEETTT
T ss_pred cEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC
Confidence 899999987 444 3899999999999754
No 16
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=1.1e-26 Score=204.54 Aligned_cols=228 Identities=16% Similarity=0.216 Sum_probs=169.8
Q ss_pred HHHHhhhHhcChhHHHHhhh--cCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 18 NEEYKIWKKNTPFLYDLVIT--HALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~--~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
+.++++|+......-..+.. ....-.+.+++|+|+. .+++++. ++.|++|++.-.
T Consensus 69 d~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~-----------~~l~~s~-----dg~v~lWd~~~~------- 125 (357)
T 4g56_B 69 GGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK-----------GILVASD-----SGAVELWEILEK------- 125 (357)
T ss_dssp CEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTT-----------EEEEEET-----TSCEEEC------------
T ss_pred cCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCC-----------CEEEEEC-----CCEEEEeecccc-------
Confidence 34456666544332222211 1122348899999975 3555543 246888876411
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
...........+|.+.|++++|+|++ ++|++|+.||.|++||+.. ...+..+.
T Consensus 126 ----------------~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~----------~~~~~~~~ 178 (357)
T 4g56_B 126 ----------------ESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQ----------KAVLKSYN 178 (357)
T ss_dssp -------------------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTT----------TEEEEEEC
T ss_pred ----------------ceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEEc
Confidence 00011112346799999999999998 7999999999999999987 45577888
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
+|...|.+++|+|++..++++++.||.|++||++.+... ....+..+...+.+++|+|++..+|++|+.|+.|++|
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~----~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~w 254 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA----TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLV 254 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB----CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEE
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee----eeeeeccccccccchhhhhcccceEEEeecccceeEE
Confidence 999999999999998778999999999999999987432 1223345677899999999877899999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCCCCC-c--cCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNASFR-L--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~-~--~~~~d~~~~~~~~~~ 302 (325)
|+++++ .+..+.+|...|++++|+|++. + +++.|+++++|+++.
T Consensus 255 d~~~~~---~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~ 301 (357)
T 4g56_B 255 NIKNPD---SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF 301 (357)
T ss_dssp ESSCGG---GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS
T ss_pred ECCCCc---EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC
Confidence 999987 4788899999999999999874 3 788999999998754
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=1.3e-25 Score=194.52 Aligned_cols=209 Identities=14% Similarity=0.136 Sum_probs=168.9
Q ss_pred HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCC
Q 020480 34 LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN 113 (325)
Q Consensus 34 ~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (325)
.+..|... +.+++|.|+.. ..++.|+. +..+++|++.-.. ..
T Consensus 12 ~l~gH~~~--V~~l~~~~~~~---------~~l~s~s~-----D~~v~~W~~~~~~----------------------~~ 53 (319)
T 3frx_A 12 TLEGHNGW--VTSLATSAGQP---------NLLLSASR-----DKTLISWKLTGDD----------------------QK 53 (319)
T ss_dssp EECCCSSC--EEEEEECSSCT---------TEEEEEET-----TSEEEEEEEEEET----------------------TE
T ss_pred EEccccce--EEEEEccCCCc---------cEEEEecC-----CccEEEecCCCCC----------------------cc
Confidence 34556544 88999998653 14555553 3489999885110 00
Q ss_pred CceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCe
Q 020480 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 114 ~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 193 (325)
.........+|...|.+++|+|++ .+|++|+.|++|++||+.. ...+..+.+|...|.+++|+|++. +
T Consensus 54 ~~~~~~~~~~h~~~v~~~~~s~dg-~~l~s~s~D~~v~~wd~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~ 121 (319)
T 3frx_A 54 FGVPVRSFKGHSHIVQDCTLTADG-AYALSASWDKTLRLWDVAT----------GETYQRFVGHKSDVMSVDIDKKAS-M 121 (319)
T ss_dssp EEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEECTTSC-E
T ss_pred ccccceEEeCCcccEEEEEECCCC-CEEEEEeCCCEEEEEECCC----------CCeeEEEccCCCcEEEEEEcCCCC-E
Confidence 012233455799999999999998 7999999999999999987 345678899999999999999998 8
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-----CcEEEEEecCCcEEEEEccCCCCCCCeeE
Q 020480 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-----EYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (325)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-----~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 268 (325)
+++|+.|+.|++||++. .++..+.+|...|.+++|+|.. ...+++++.|+.|++||++..+ ....
T Consensus 122 l~s~s~D~~i~vwd~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~ 191 (319)
T 3frx_A 122 IISGSRDKTIKVWTIKG-------QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQ---IEAD 191 (319)
T ss_dssp EEEEETTSCEEEEETTS-------CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTE---EEEE
T ss_pred EEEEeCCCeEEEEECCC-------CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcch---hhee
Confidence 99999999999999974 3577788999999999999853 2489999999999999999877 3677
Q ss_pred eeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 269 VVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 269 ~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+.+|...|++++|+|+|.+ +++.|+++++|+++.
T Consensus 192 ~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~ 227 (319)
T 3frx_A 192 FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAA 227 (319)
T ss_dssp ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 8899999999999999985 889999999999754
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.5e-27 Score=204.20 Aligned_cols=235 Identities=16% Similarity=0.185 Sum_probs=169.6
Q ss_pred hHHHHhhhHhcCh--hHHHHh-hh-cCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCC
Q 020480 17 INEEYKIWKKNTP--FLYDLV-IT-HALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 17 ~~~~~~iw~~~~~--~~y~~~-~~-~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 92 (325)
.+.++|+|+.+.. .+...+ .. |. -++.+++|.|++. .++.|+.. ..+.+|++.-+..
T Consensus 32 ~D~~i~lw~~~~~~~~~~~~~~~~~h~--~~v~~v~~sp~~~----------~las~s~D-----~~v~iw~~~~~~~-- 92 (330)
T 2hes_X 32 TDRKIKLVSVKYDDFTLIDVLDETAHK--KAIRSVAWRPHTS----------LLAAGSFD-----STVSIWAKEESAD-- 92 (330)
T ss_dssp SSSCEEEEECSSSCCEEEEEECTTCCC--SCEEEEEECTTSS----------EEEEEETT-----SCEEEEEC-------
T ss_pred CCCEEEEEEecCCCeEEEEEEecCCcc--CCEEEEEECCCCC----------EEEEEeCC-----CcEEEEEcccCcC--
Confidence 5678999988763 222222 22 33 3588999999864 46666543 4788887631100
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEE-EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
.....+. ....+|.+.|.+++|+|++ ++||+|+.|+.|++||+.... .....+
T Consensus 93 -------------------~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~------~~~~~~ 146 (330)
T 2hes_X 93 -------------------RTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESG------EEYECI 146 (330)
T ss_dssp ---------------------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTC------CCCEEE
T ss_pred -------------------ccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCC------CCeEEE
Confidence 0011122 2345799999999999998 799999999999999995410 112345
Q ss_pred EEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-CcEEEEEecCC
Q 020480 172 LRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQ 250 (325)
Q Consensus 172 ~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~l~s~~~dg 250 (325)
..+.+|...|.+++|+|++. +|++|+.|++|++||.+.+.. .++..+.+|...|.+++|+|++ ...|++|+.|+
T Consensus 147 ~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~ 221 (330)
T 2hes_X 147 SVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDW----ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS 221 (330)
T ss_dssp EEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEE----EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS
T ss_pred EEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCe----eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC
Confidence 67889999999999999988 899999999999999875421 3577888999999999999973 25899999999
Q ss_pred cEEEEEccCCCCC-----CCeeEeec-cCCCeeEEEeCCCCCc-cCCCCceEEeeecc
Q 020480 251 YLLIWDLRTPSVS-----KPVQSVVA-HQSEVGVSILNASFRL-SHEDTCTCTHRHSR 301 (325)
Q Consensus 251 ~i~iwd~~~~~~~-----~~~~~~~~-h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~ 301 (325)
+|++||++..... .....+.. |...|.+++|++++.+ +++.|+++++|+..
T Consensus 222 ~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 222 TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEV 279 (330)
T ss_dssp CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEE
T ss_pred eEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcC
Confidence 9999999865311 01333333 8999999999988865 88999999999864
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.8e-26 Score=198.24 Aligned_cols=170 Identities=19% Similarity=0.290 Sum_probs=134.9
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
|.+.|.+++|+|++ .+||+|+.|+.|++|++....... .....+..+.+|...|.+++|+|++. +|++|+.|++|
T Consensus 57 h~~~v~~v~~sp~~-~~las~s~D~~v~iw~~~~~~~~~---~~~~~~~~~~~h~~~V~~v~~sp~g~-~las~s~D~~v 131 (330)
T 2hes_X 57 HKKAIRSVAWRPHT-SLLAAGSFDSTVSIWAKEESADRT---FEMDLLAIIEGHENEVKGVAWSNDGY-YLATCSRDKSV 131 (330)
T ss_dssp CCSCEEEEEECTTS-SEEEEEETTSCEEEEEC----------CCCEEEEEEC----CEEEEEECTTSC-EEEEEETTSCE
T ss_pred ccCCEEEEEECCCC-CEEEEEeCCCcEEEEEcccCcCcc---ccceeEEEEcCCCCcEEEEEECCCCC-EEEEEeCCCEE
Confidence 99999999999998 799999999999999986411000 11234567889999999999999998 89999999999
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
++||++..... ..++..+.+|...|.+++|+|++ .+|++|+.|++|++||++... ..++..+.+|...|.+++|+|
T Consensus 132 ~iwd~~~~~~~--~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~-~~~~~~~~~h~~~v~~~~~~~ 207 (330)
T 2hes_X 132 WIWETDESGEE--YECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDD-WECVAVLNGHEGTVWSSDFDK 207 (330)
T ss_dssp EEEECCTTCCC--CEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECC
T ss_pred EEEeccCCCCC--eEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCC-eeEEEEccCCCCcEEEEEecC
Confidence 99999643211 13567788999999999999987 699999999999999998763 114778889999999999999
Q ss_pred C--CC--ccCCCCceEEeeecce
Q 020480 284 S--FR--LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 284 ~--~~--~~~~~d~~~~~~~~~~ 302 (325)
+ +. ++++.|+++++|+++.
T Consensus 208 ~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 208 TEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp SSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCeeEEEEEeCCCeEEEEEecC
Confidence 8 43 3889999999998754
No 20
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=6.6e-27 Score=207.64 Aligned_cols=249 Identities=13% Similarity=0.148 Sum_probs=179.7
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCC-----
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD----- 90 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~----- 90 (325)
..|.+++||+..+......+..|.. ++.+++|.|++. .++.|.. +..+.+|++.-...
T Consensus 85 s~D~~v~iWd~~~~~~~~~~~~h~~--~v~~~~~s~~g~----------~las~~~-----d~~v~iw~~~~~~~~~~~~ 147 (380)
T 3iz6_a 85 SQDGRLIVWNALTSQKTHAIKLHCP--WVMECAFAPNGQ----------SVACGGL-----DSACSIFNLSSQADRDGNM 147 (380)
T ss_dssp ETTSEEEEEETTTTEEEEEEECCCT--TCCCCEECTTSS----------EEEECCS-----SSCCEEEECCCCSSCCCSS
T ss_pred eCCCeEEEEECCCCccceEEecCCC--CEEEEEECCCCC----------EEEEeeC-----CCcEEEEECCCCccccCCc
Confidence 3577899999877665555555543 378899999874 3444332 34566776531100
Q ss_pred -------CCC--cccCCCC----------cccCCCCCCCCCCCceEEEEE----eccCCCeeEEEecCCCCcEEEEEecC
Q 020480 91 -------DSE--NDARHYD----------DDRSDFGGFGCANGKVQIIQQ----INHDGEVNRARYMPQNPFLIATKTVS 147 (325)
Q Consensus 91 -------~~~--~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~v~~~~~~~~~la~g~~d 147 (325)
... ...-.+. ..++.+..|+...++...... .+|...|.++.|++.+.++|++|+.|
T Consensus 148 ~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D 227 (380)
T 3iz6_a 148 PVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD 227 (380)
T ss_dssp TTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT
T ss_pred cceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC
Confidence 000 0000000 112344455555544322111 35889999999998555899999999
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecC-
Q 020480 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH- 226 (325)
Q Consensus 148 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~- 226 (325)
|.|++||++. ....+..+.+|...|.+++|+|++. +|++|+.||+|++||++.+ ..+..+..+
T Consensus 228 ~~v~~wd~~~---------~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~lwd~~~~------~~~~~~~~~~ 291 (380)
T 3iz6_a 228 TTVRLWDLRI---------TSRAVRTYHGHEGDINSVKFFPDGQ-RFGTGSDDGTCRLFDMRTG------HQLQVYNREP 291 (380)
T ss_dssp SCEEEEETTT---------TCCCCEEECCCSSCCCEEEECTTSS-EEEEECSSSCEEEEETTTT------EEEEEECCCC
T ss_pred CeEEEEECCC---------CCcceEEECCcCCCeEEEEEecCCC-eEEEEcCCCeEEEEECCCC------cEEEEecccc
Confidence 9999999974 1345778899999999999999998 8999999999999999987 334444332
Q ss_pred ------CccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe----eccCCCeeEEEeCCCCCc--cCCCCce
Q 020480 227 ------EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV----VAHQSEVGVSILNASFRL--SHEDTCT 294 (325)
Q Consensus 227 ------~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~h~~~v~~i~~~p~~~~--~~~~d~~ 294 (325)
...|.+++|+|++ .++++|+.||.|++||+..++. +..+ .+|...|++++|+|+|.+ +++.|++
T Consensus 292 ~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~---~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM---VLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp SSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE---EEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred cccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce---EEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 2348999999997 6999999999999999988774 5444 579999999999999985 8999999
Q ss_pred EEeeecc
Q 020480 295 CTHRHSR 301 (325)
Q Consensus 295 ~~~~~~~ 301 (325)
+++|++.
T Consensus 368 i~iW~~~ 374 (380)
T 3iz6_a 368 LKIWAFS 374 (380)
T ss_dssp EEEEECC
T ss_pred EEEEecC
Confidence 9999864
No 21
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=4.9e-27 Score=212.15 Aligned_cols=201 Identities=14% Similarity=0.235 Sum_probs=159.3
Q ss_pred ceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEec
Q 020480 44 SLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQIN 123 (325)
Q Consensus 44 ~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (325)
+.+++|.|.... .++.|+.. ..|.+|++... .........+
T Consensus 122 V~~l~~~P~~~~---------~lasGs~d-----g~i~lWd~~~~-------------------------~~~~~~~~~g 162 (435)
T 4e54_B 122 ATSLAWHPTHPS---------TVAVGSKG-----GDIMLWNFGIK-------------------------DKPTFIKGIG 162 (435)
T ss_dssp EEEEEECSSCTT---------CEEEEETT-----SCEEEECSSCC-------------------------SCCEEECCCS
T ss_pred EEEEEEeCCCCC---------EEEEEeCC-----CEEEEEECCCC-------------------------CceeEEEccC
Confidence 788999996542 36666643 36888865311 1223334567
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---cCCCceEEEEecCCCCCeEEEEeCC
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---GHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
|.+.|++|+|+|.+.++|++|+.||+|++||+.. .....+. .+...+.+++|+|++. +|++|+.|
T Consensus 163 H~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g~~d 230 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG-----------NILRVFASSDTINIWFCSLDVSASSR-MVVTGDNV 230 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS-----------CEEEEEECCSSCSCCCCCEEEETTTT-EEEEECSS
T ss_pred CCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC-----------CceeEEeccCCCCccEEEEEECCCCC-EEEEEeCC
Confidence 9999999999996558999999999999999976 1122232 3345678999999998 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
|.|++||++.. .+..+.+|...|.+++|+|++..++++|+.|++|++||++..+....+....+|..+|++++
T Consensus 231 g~i~~wd~~~~-------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~ 303 (435)
T 4e54_B 231 GNVILLNMDGK-------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAAC 303 (435)
T ss_dssp SBEEEEESSSC-------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECC
T ss_pred CcEeeeccCcc-------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecccccccee
Confidence 99999999753 45567889999999999999888999999999999999998775444455578999999999
Q ss_pred eCCCCCc--cCCCCceEEeeecce
Q 020480 281 LNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 281 ~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
|+|+|.+ +++.|+++++|+++.
T Consensus 304 ~spdg~~l~s~~~D~~i~iwd~~~ 327 (435)
T 4e54_B 304 FSPDGARLLTTDQKSEIRVYSASQ 327 (435)
T ss_dssp BCTTSSEEEEEESSSCEEEEESSS
T ss_pred ECCCCCeeEEEcCCCEEEEEECCC
Confidence 9999984 889999999998754
No 22
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=1.1e-26 Score=206.14 Aligned_cols=212 Identities=19% Similarity=0.301 Sum_probs=166.9
Q ss_pred hhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCC
Q 020480 35 VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (325)
Q Consensus 35 ~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (325)
+..|.. ++.+++|+|++. .++.|+. +..+.+|++. .+
T Consensus 62 l~gH~~--~V~~~~~sp~~~----------~l~s~s~-----D~~v~iWd~~--------------------------~~ 98 (380)
T 3iz6_a 62 LQGHSG--KVYSLDWTPEKN----------WIVSASQ-----DGRLIVWNAL--------------------------TS 98 (380)
T ss_dssp ECCCSS--CEEEEEECTTSS----------CEEEEET-----TSEEEEEETT--------------------------TT
T ss_pred cccccc--EEEEEEEcCCCC----------EEEEEeC-----CCeEEEEECC--------------------------CC
Confidence 444543 488999999764 4555554 3478888642 11
Q ss_pred ceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
+ .......|...|.+++|+|++ .+||+|+.|+.|++|++....... +.......+.+|.+.+.++.|+|++...|
T Consensus 99 ~-~~~~~~~h~~~v~~~~~s~~g-~~las~~~d~~v~iw~~~~~~~~~---~~~~~~~~~~gh~~~v~~~~~~~~~~~~l 173 (380)
T 3iz6_a 99 Q-KTHAIKLHCPWVMECAFAPNG-QSVACGGLDSACSIFNLSSQADRD---GNMPVSRVLTGHKGYASSCQYVPDQETRL 173 (380)
T ss_dssp E-EEEEEECCCTTCCCCEECTTS-SEEEECCSSSCCEEEECCCCSSCC---CSSTTCCBCCCCSSCCCCCBCCSSSSSCE
T ss_pred c-cceEEecCCCCEEEEEECCCC-CEEEEeeCCCcEEEEECCCCcccc---CCccceeeccCCCcceEEEEEecCCCCEE
Confidence 1 223345799999999999998 799999999999999997532111 22233456789999999999999876689
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEee-----ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIF-----KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
++|+.|++|++||++++. .+..+ .+|...|.+++|+|.+..+|++|+.|++|++||++.... ++..+
T Consensus 174 ~s~s~D~~i~~wd~~~~~------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~--~~~~~ 245 (380)
T 3iz6_a 174 ITGSGDQTCVLWDVTTGQ------RISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSR--AVRTY 245 (380)
T ss_dssp EEECTTSCEEEECTTTCC------EEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCC--CCEEE
T ss_pred EEECCCCcEEEEEcCCCc------EEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCc--ceEEE
Confidence 999999999999999873 34444 578899999999885568999999999999999986543 57888
Q ss_pred eccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 270 VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.+|...|++++|+|++.+ +++.|+++++|+++.
T Consensus 246 ~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 246 HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 999999999999999984 899999999999864
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=7e-26 Score=199.13 Aligned_cols=226 Identities=16% Similarity=0.171 Sum_probs=174.1
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..|.++++|+.........+..+. -.+.+++|.|++. .++.|.. ++.+.++.+.......
T Consensus 83 s~Dg~v~vWd~~~~~~~~~~~~~~--~~v~~~~~sp~g~----------~lasg~~-----d~~i~v~~~~~~~~~~--- 142 (354)
T 2pbi_B 83 SQDGKVIVWDSFTTNKEHAVTMPC--TWVMACAYAPSGC----------AIACGGL-----DNKCSVYPLTFDKNEN--- 142 (354)
T ss_dssp ETTSEEEEEETTTCCEEEEEECSS--SCCCEEEECTTSS----------EEEEEST-----TSEEEEEECCCCTTCC---
T ss_pred eCCCeEEEEECCCCCcceEEecCC--CCEEEEEECCCCC----------EEEEeeC-----CCCEEEEEEecccccc---
Confidence 356789999876654433333333 2478999999874 4555443 4578888764221000
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
..... .....|.+.|.+++|+|++ ..|++|+.||+|++||+.. ...+..+.
T Consensus 143 ----------------~~~~~--~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~----------~~~~~~~~ 193 (354)
T 2pbi_B 143 ----------------MAAKK--KSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVES----------GQLLQSFH 193 (354)
T ss_dssp ----------------SGGGC--EEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTT----------CCEEEEEE
T ss_pred ----------------ccccc--eeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCC----------CeEEEEEc
Confidence 00111 1234799999999999988 6899999999999999987 35577889
Q ss_pred cCCCceEEEEecCC--CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEE
Q 020480 176 GHSTEGYGLSWSKF--KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253 (325)
Q Consensus 176 ~h~~~v~~l~~~p~--~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~ 253 (325)
+|...|.+++|+|. +. +|++|+.||.|++||++++ .++..+.+|...|++++|+|++ .+|++|+.|++|+
T Consensus 194 ~h~~~v~~~~~~~~~~g~-~l~sgs~Dg~v~~wd~~~~------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~ 265 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGN-TFVSGGCDKKAMVWDMRSG------QCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCR 265 (354)
T ss_dssp CCSSCEEEEEECCCSSCC-EEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEE
T ss_pred CCCCCeEEEEEEeCCCCC-EEEEEeCCCeEEEEECCCC------cEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEE
Confidence 99999999999885 44 8999999999999999987 4677889999999999999987 6999999999999
Q ss_pred EEEccCCCCCCCeeEeec--cCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 254 IWDLRTPSVSKPVQSVVA--HQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 254 iwd~~~~~~~~~~~~~~~--h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+||++.... +..+.. +...+.+++|+|+|.+ +++.|+++++|+++
T Consensus 266 lwd~~~~~~---~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 266 LYDLRADRE---VAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp EEETTTTEE---EEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEECCCCcE---EEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 999998763 444433 3457899999999985 78899999999874
No 24
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=5.3e-26 Score=196.77 Aligned_cols=212 Identities=17% Similarity=0.162 Sum_probs=162.0
Q ss_pred hhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCc
Q 020480 36 ITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGK 115 (325)
Q Consensus 36 ~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (325)
..|.. ++.+++|.|++. .++.|+. +..+++|++.- +.
T Consensus 10 ~~H~~--~V~~v~~s~~g~----------~lasgs~-----D~~v~lwd~~~--------------------------~~ 46 (316)
T 3bg1_A 10 TSHED--MIHDAQMDYYGT----------RLATCSS-----DRSVKIFDVRN--------------------------GG 46 (316)
T ss_dssp ----C--CEEEEEECGGGC----------EEEEEET-----TTEEEEEEEET--------------------------TE
T ss_pred ccccC--eEEEeeEcCCCC----------EEEEEeC-----CCeEEEEEecC--------------------------CC
Confidence 34544 488999999874 5666654 34899998751 12
Q ss_pred e-EEEEEeccCCCeeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC--CC
Q 020480 116 V-QIIQQINHDGEVNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KE 191 (325)
Q Consensus 116 ~-~~~~~~~h~~~v~~v~~~~~-~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~ 191 (325)
. ......+|.+.|++++|++. ..++|++|+.|++|++||+.. +.......+.+|...|.+++|+|+ +.
T Consensus 47 ~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~--------~~~~~~~~~~~h~~~V~~v~~~p~~~g~ 118 (316)
T 3bg1_A 47 QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREEN--------GTWEKSHEHAGHDSSVNSVCWAPHDYGL 118 (316)
T ss_dssp EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSS--------SCCCEEEEECCCSSCCCEEEECCTTTCS
T ss_pred cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCC--------CcceEEEEccCCCCceEEEEECCCCCCc
Confidence 2 22345579999999999863 237999999999999999986 333456678899999999999998 55
Q ss_pred CeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC----------------CcEEEEEecCCcEEEE
Q 020480 192 GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH----------------EYLFGSVGDDQYLLIW 255 (325)
Q Consensus 192 ~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~----------------~~~l~s~~~dg~i~iw 255 (325)
+|++|+.|+.|++||++.... ......+.+|...|.+++|+|+. ..+|++|+.|++|++|
T Consensus 119 -~lasgs~D~~i~lwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lW 194 (316)
T 3bg1_A 119 -ILACGSSDGAISLLTYTGEGQ---WEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLW 194 (316)
T ss_dssp -CEEEECSSSCEEEEEECSSSC---EEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEE
T ss_pred -EEEEEcCCCCEEEEecCCCCC---cceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEE
Confidence 899999999999999986522 01234557899999999999973 2589999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCCCC----C--ccCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNASF----R--LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p~~----~--~~~~~d~~~~~~~~~~ 302 (325)
|++......++..+.+|...|.+++|+|++ . ++++.|+++++|++..
T Consensus 195 d~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 195 KEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp EECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred EeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 997653222466778999999999999986 3 3899999999998653
No 25
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=7.1e-26 Score=201.89 Aligned_cols=226 Identities=18% Similarity=0.304 Sum_probs=175.0
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.....+...+..|.. ++.+++|.|++. .++.++. +..+.+|++.
T Consensus 143 ~d~~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~p~~~----------~l~s~s~-----d~~v~iwd~~---------- 195 (393)
T 1erj_A 143 EDRLIRIWDIENRKIVMILQGHEQ--DIYSLDYFPSGD----------KLVSGSG-----DRTVRIWDLR---------- 195 (393)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSS----------EEEEEET-----TSEEEEEETT----------
T ss_pred CCCeEEEEECCCCcEEEEEccCCC--CEEEEEEcCCCC----------EEEEecC-----CCcEEEEECC----------
Confidence 568899999988766656666654 488999999874 4555554 3478888652
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE--
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-- 174 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-- 174 (325)
.++ ....+.+...+.+++|+|.+..+|++|+.||.|++||+.. + ..+..+
T Consensus 196 ----------------~~~--~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~--------~--~~~~~~~~ 247 (393)
T 1erj_A 196 ----------------TGQ--CSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET--------G--FLVERLDS 247 (393)
T ss_dssp ----------------TTE--EEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT--------C--CEEEEEC-
T ss_pred ----------------CCe--eEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC--------C--cEEEeecc
Confidence 122 2334567788999999994447999999999999999976 2 223333
Q ss_pred -----ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCC------cccceEeeecCCccEEEEEeecCCCcEE
Q 020480 175 -----RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK------SLEAMQIFKVHEGVVEDVAWHLRHEYLF 243 (325)
Q Consensus 175 -----~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~------~~~~~~~~~~~~~~v~~v~~~p~~~~~l 243 (325)
.+|...|++++|+|++. +|++|+.|+.|++||++...... ...+...+.+|...|.+++|+|++ .+|
T Consensus 248 ~~~~~~~h~~~v~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l 325 (393)
T 1erj_A 248 ENESGTGHKDSVYSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYI 325 (393)
T ss_dssp -----CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEE
T ss_pred cccCCCCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEE
Confidence 57999999999999998 89999999999999998643210 113456678899999999999987 699
Q ss_pred EEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC------CCC--ccCCCCceEEeeecce
Q 020480 244 GSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA------SFR--LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 244 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p------~~~--~~~~~d~~~~~~~~~~ 302 (325)
++|+.|+.|++||+++++ ++..+.+|...|.+++|++ ++. ++++.|+++++|+...
T Consensus 326 ~sgs~D~~v~iwd~~~~~---~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 326 LSGSKDRGVLFWDKKSGN---PLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 389 (393)
T ss_dssp EEEETTSEEEEEETTTCC---EEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEE
T ss_pred EEEeCCCeEEEEECCCCe---EEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcccc
Confidence 999999999999999987 4888899999999999987 344 3889999999998754
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=4e-26 Score=214.83 Aligned_cols=220 Identities=14% Similarity=0.117 Sum_probs=176.3
Q ss_pred HHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccC
Q 020480 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDAR 97 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 97 (325)
+.++++|+...+.....+..|... +.+++|+|++. .++.|+. +..+.+|++.-.
T Consensus 38 ~~~v~l~~~~~~~~~~~~~~h~~~--v~~~~~spdg~----------~lasg~~-----d~~v~lWd~~~~--------- 91 (611)
T 1nr0_A 38 GTSVYTVPVGSLTDTEIYTEHSHQ--TTVAKTSPSGY----------YCASGDV-----HGNVRIWDTTQT--------- 91 (611)
T ss_dssp TTEEEEEETTCSSCCEEECCCSSC--EEEEEECTTSS----------EEEEEET-----TSEEEEEESSST---------
T ss_pred CCEEEEecCCCcccCeEecCCCCc--eEEEEECCCCc----------EEEEEeC-----CCCEEEeECCCC---------
Confidence 357899998877777677777654 89999999874 5666654 347999975310
Q ss_pred CCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEE
Q 020480 98 HYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLR 173 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~ 173 (325)
.. ........|.+.|.+++|+|++ ..||+++.+ +.|++||... ....
T Consensus 92 ---------------~~-~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd~~~------------~~~~ 142 (611)
T 1nr0_A 92 ---------------TH-ILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDTGT------------SNGN 142 (611)
T ss_dssp ---------------TC-CEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTTCC------------BCBC
T ss_pred ---------------cc-eeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEeeCCC------------Ccce
Confidence 11 1222345799999999999999 577777654 4788888543 2445
Q ss_pred EecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEE
Q 020480 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253 (325)
Q Consensus 174 ~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~ 253 (325)
+.+|...|.+++|+|++...|++|+.|++|++||.... .+...+.+|...|.+++|+|++ .+||+|+.|++|+
T Consensus 143 l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~------~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~ 215 (611)
T 1nr0_A 143 LTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPF------KFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIV 215 (611)
T ss_dssp CCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTB------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEE
T ss_pred ecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCC------eEeeeeccccCceEEEEECCCC-CEEEEEECCCcEE
Confidence 78999999999999998757999999999999998765 4577889999999999999997 6999999999999
Q ss_pred EEEccCCCCCCCeeEee-------ccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 254 IWDLRTPSVSKPVQSVV-------AHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 254 iwd~~~~~~~~~~~~~~-------~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+||+++++. +..+. +|...|.+++|+|+|.+ +++.|+++++|+++.
T Consensus 216 lwd~~~g~~---~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~ 270 (611)
T 1nr0_A 216 LYNGVDGTK---TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVAT 270 (611)
T ss_dssp EEETTTCCE---EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEECCCCcE---eeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCC
Confidence 999998874 55553 79999999999999984 889999999999753
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=4.3e-25 Score=191.72 Aligned_cols=225 Identities=12% Similarity=0.104 Sum_probs=168.5
Q ss_pred HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCC
Q 020480 34 LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN 113 (325)
Q Consensus 34 ~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (325)
.+..|.. ++.+++|.|++. .++.|.. +..|.+|++.-. .
T Consensus 6 ~~~gH~~--~v~~~~~~~~~~----------~l~~~~~-----dg~i~iw~~~~~------------------------~ 44 (351)
T 3f3f_A 6 FDSGHDD--LVHDVVYDFYGR----------HVATCSS-----DQHIKVFKLDKD------------------------T 44 (351)
T ss_dssp EECCCSS--CEEEEEECSSSS----------EEEEEET-----TSEEEEEEECSS------------------------S
T ss_pred cCccccc--ceeEEEEcCCCC----------EEEEeeC-----CCeEEEEECCCC------------------------C
Confidence 3445554 489999999764 4666653 348999988411 1
Q ss_pred CceEEE-EEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC-
Q 020480 114 GKVQII-QQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF- 189 (325)
Q Consensus 114 ~~~~~~-~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~- 189 (325)
...+.. ....|.+.|++++|+|. + .+|++|+.||.|++||+........ .....++..+.+|...|.+++|+|+
T Consensus 45 ~~~~~~~~~~~~~~~v~~~~~~~~~d~-~~l~s~~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~~ 122 (351)
T 3f3f_A 45 SNWELSDSWRAHDSSIVAIDWASPEYG-RIIASASYDKTVKLWEEDPDQEECS-GRRWNKLCTLNDSKGSLYSVKFAPAH 122 (351)
T ss_dssp CCEEEEEEEECCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEECTTSCTTS-SCSEEEEEEECCCSSCEEEEEECCGG
T ss_pred CcceecceeccCCCcEEEEEEcCCCCC-CEEEEEcCCCeEEEEecCCCccccc-ccCcceeeeecccCCceeEEEEcCCC
Confidence 222333 33469999999999994 5 7999999999999999986211100 0011336677899999999999999
Q ss_pred -CCCeEEEEeCCCcEEEEeCCCCCCCCcc---------------------------------------------------
Q 020480 190 -KEGHLLSGSDDAQICLWDINAAPKNKSL--------------------------------------------------- 217 (325)
Q Consensus 190 -~~~~l~s~s~dg~i~iwd~~~~~~~~~~--------------------------------------------------- 217 (325)
+. ++++++.||.|++||++.+.....+
T Consensus 123 ~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~ 201 (351)
T 3f3f_A 123 LGL-KLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD 201 (351)
T ss_dssp GCS-EEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTT
T ss_pred CCc-EEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCC
Confidence 77 8999999999999999876432111
Q ss_pred ---cceEeeecCCccEEEEEeecCCC---cEEEEEecCCcEEEEEccCCCC-----------------------------
Q 020480 218 ---EAMQIFKVHEGVVEDVAWHLRHE---YLFGSVGDDQYLLIWDLRTPSV----------------------------- 262 (325)
Q Consensus 218 ---~~~~~~~~~~~~v~~v~~~p~~~---~~l~s~~~dg~i~iwd~~~~~~----------------------------- 262 (325)
..+..+.+|...|.+++|+|++. .+|++|+.||.|++||++....
T Consensus 202 ~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (351)
T 3f3f_A 202 GKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSD 281 (351)
T ss_dssp SCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC------------------------------
T ss_pred CceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccc
Confidence 12455667999999999999863 6899999999999999987521
Q ss_pred --------------CCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 263 --------------SKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 263 --------------~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
...+..+.+|...|++++|+|++.+ +++.|+.+++|++..
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~ 337 (351)
T 3f3f_A 282 SNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATY 337 (351)
T ss_dssp ---------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred cccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCc
Confidence 0235566789999999999999985 889999999998764
No 28
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.94 E-value=1.2e-24 Score=191.29 Aligned_cols=203 Identities=19% Similarity=0.259 Sum_probs=165.3
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
++.+++|.|++. .++.|+. +..+.+|+.. .++. .....
T Consensus 66 ~V~~~~~s~d~~----------~l~s~s~-----Dg~v~vWd~~--------------------------~~~~-~~~~~ 103 (354)
T 2pbi_B 66 KVLCMDWCKDKR----------RIVSSSQ-----DGKVIVWDSF--------------------------TTNK-EHAVT 103 (354)
T ss_dssp CEEEEEECTTSS----------EEEEEET-----TSEEEEEETT--------------------------TCCE-EEEEE
T ss_pred eEEEEEECCCCC----------EEEEEeC-----CCeEEEEECC--------------------------CCCc-ceEEe
Confidence 588999998763 5666654 3478888642 1111 12234
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
.|...|.+++|+|++ ..+|+|+.|+.+++|++...... ........+.+|...|.+++|+|++. .|++++.|++
T Consensus 104 ~~~~~v~~~~~sp~g-~~lasg~~d~~i~v~~~~~~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~ 177 (354)
T 2pbi_B 104 MPCTWVMACAYAPSG-CAIACGGLDNKCSVYPLTFDKNE----NMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGT 177 (354)
T ss_dssp CSSSCCCEEEECTTS-SEEEEESTTSEEEEEECCCCTTC----CSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSE
T ss_pred cCCCCEEEEEECCCC-CEEEEeeCCCCEEEEEEeccccc----cccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCc
Confidence 588899999999998 79999999999999998752111 11234567789999999999999988 8999999999
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-CcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEe
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSIL 281 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~ 281 (325)
|++||++.+ .++..+.+|...|.+++|+|.. ..+|++|+.||.|++||++++++ +..+.+|...|++++|
T Consensus 178 v~lwd~~~~------~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~---~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 178 CALWDVESG------QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQC---VQAFETHESDVNSVRY 248 (354)
T ss_dssp EEEEETTTC------CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEE
T ss_pred EEEEeCCCC------eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcE---EEEecCCCCCeEEEEE
Confidence 999999887 4678889999999999998852 36999999999999999999874 8888999999999999
Q ss_pred CCCCCc--cCCCCceEEeeecce
Q 020480 282 NASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 282 ~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+|++.+ +++.|+++++|+++.
T Consensus 249 ~p~~~~l~s~s~D~~v~lwd~~~ 271 (354)
T 2pbi_B 249 YPSGDAFASGSDDATCRLYDLRA 271 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTT
T ss_pred eCCCCEEEEEeCCCeEEEEECCC
Confidence 999884 889999999999764
No 29
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=4.6e-26 Score=209.64 Aligned_cols=239 Identities=10% Similarity=0.090 Sum_probs=171.3
Q ss_pred hhHHHHhhhHhcChhHHH----HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCC
Q 020480 16 LINEEYKIWKKNTPFLYD----LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDD 91 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~----~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 91 (325)
..+.++|||+.+...+.. .+..+. -.+.+++|+|..... . ....++.++. +..+.+|++.....
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~--~~V~~v~wsp~~~~~--~--~~~~LAs~s~-----DgtvrlWd~~~~~~- 247 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSF--GEVWDLKWHEGCHAP--H--LVGCLSFVSQ-----EGTINFLEIIDNAT- 247 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECC--CSEEEEEECSSCCCS--S--SSCEEEEEET-----TSCEEEEECCCCSS-
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecC--CcEEEEEECCCCCCC--C--CCceEEEEec-----CCeEEEEEcCCCcc-
Confidence 466789999987765321 122222 248899999973210 0 0124544544 34799998742210
Q ss_pred CCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 92 SENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
... .. .....+. ....+|.+.|++++|++.+ .||+|+.||+|++||++. + ..+.
T Consensus 248 -~~~--~~---------~~~~~p~---~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~--------~-~~~~ 301 (524)
T 2j04_B 248 -DVH--VF---------KMCEKPS---LTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTD--------P-EVPS 301 (524)
T ss_dssp -SSS--EE---------ECCCSCS---EEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTB--------C-SSCS
T ss_pred -ccc--cc---------eeecCce---EEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCC--------C-CCce
Confidence 000 00 0001111 1245799999999999854 799999999999999986 2 2456
Q ss_pred EEEecCCCceEEE--EecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCc--cEEEEEeecCCCcEEEEEe
Q 020480 172 LRLRGHSTEGYGL--SWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG--VVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 172 ~~~~~h~~~v~~l--~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~--~v~~v~~~p~~~~~l~s~~ 247 (325)
..+.+|...|.++ .|+|++..+|+||+.|++|+|||++.+ .+...+.+|.. .|.+++|+|++ ..+++++
T Consensus 302 ~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~------~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~ 374 (524)
T 2j04_B 302 FYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI------ATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSD 374 (524)
T ss_dssp EEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH------HHHCEEEEECSCCSCCCEEEETTT-TEEEEEC
T ss_pred EEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC------CcccccccccccCcccceEeCCCc-CeEEEeC
Confidence 6788999999999 578877338999999999999999876 34445556643 48899999987 5789999
Q ss_pred cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 248 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.|++|++||+++..+ +..+.+|.+.|++|+|+|+|.+ +|+.|+++++|+...
T Consensus 375 ~d~tv~lwd~~~~~~---~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 375 GASSLRAVPSRAAFA---VHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp SSSEEEEEETTCTTC---CEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred CCCcEEEEECccccc---ceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 999999999999874 6778889999999999999985 899999999998643
No 30
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=5.1e-26 Score=214.10 Aligned_cols=226 Identities=15% Similarity=0.210 Sum_probs=169.0
Q ss_pred hHHHHhhhHhcChh--HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKNTPF--LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~~~~--~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+.++|||+..... +...+..|. -++.+++|+|++. .++.+.... .....+.+|+. .
T Consensus 79 ~d~~v~lWd~~~~~~~~~~~~~~~~--~~v~~v~fs~dg~----------~l~~~~~~~-~~~~~v~~wd~--~------ 137 (611)
T 1nr0_A 79 VHGNVRIWDTTQTTHILKTTIPVFS--GPVKDISWDSESK----------RIAAVGEGR-ERFGHVFLFDT--G------ 137 (611)
T ss_dssp TTSEEEEEESSSTTCCEEEEEECSS--SCEEEEEECTTSC----------EEEEEECCS-SCSEEEEETTT--C------
T ss_pred CCCCEEEeECCCCcceeeEeecccC--CceEEEEECCCCC----------EEEEEECCC-CceeEEEEeeC--C------
Confidence 46789999975422 112233343 3589999999874 444443211 11123333321 0
Q ss_pred ccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 95 DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
.. . ....+|.+.|++++|+|+++..|++|+.|++|++||... .+....+
T Consensus 138 ------------------~~-~--~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~----------~~~~~~l 186 (611)
T 1nr0_A 138 ------------------TS-N--GNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP----------FKFKSTF 186 (611)
T ss_dssp ------------------CB-C--BCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT----------BEEEEEE
T ss_pred ------------------CC-c--ceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC----------CeEeeee
Confidence 00 0 013479999999999999866799999999999999875 3446778
Q ss_pred ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeee-------cCCccEEEEEeecCCCcEEEEEe
Q 020480 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-------VHEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 175 ~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-------~~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
.+|...|.+++|+|++. +|++|+.|++|++||+..+. ++..+. +|...|.+++|+|++ .+|++|+
T Consensus 187 ~~H~~~V~~v~fspdg~-~las~s~D~~i~lwd~~~g~------~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s 258 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGS-LFASTGGDGTIVLYNGVDGT------KTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASAS 258 (611)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC------EEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEE
T ss_pred ccccCceEEEEECCCCC-EEEEEECCCcEEEEECCCCc------EeeeeccccccccccCCCEEEEEECCCC-CEEEEEe
Confidence 89999999999999998 89999999999999998763 344442 799999999999997 6999999
Q ss_pred cCCcEEEEEccCCCCCC----------------------------------------CeeEeeccCCCeeEEEeCCCCCc
Q 020480 248 DDQYLLIWDLRTPSVSK----------------------------------------PVQSVVAHQSEVGVSILNASFRL 287 (325)
Q Consensus 248 ~dg~i~iwd~~~~~~~~----------------------------------------~~~~~~~h~~~v~~i~~~p~~~~ 287 (325)
.|++|++||+++++... ....+.+|...|++++|+|+|++
T Consensus 259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence 99999999998754210 12234579999999999999985
Q ss_pred --cCCCCceEEeeecce
Q 020480 288 --SHEDTCTCTHRHSRY 302 (325)
Q Consensus 288 --~~~~d~~~~~~~~~~ 302 (325)
+++.|+++++|++..
T Consensus 339 l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 339 LFSADAEGHINSWDIST 355 (611)
T ss_dssp EEEEETTSCEEEEETTT
T ss_pred EEEEeCCCcEEEEECCC
Confidence 889999999999753
No 31
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.94 E-value=3e-25 Score=194.40 Aligned_cols=171 Identities=19% Similarity=0.288 Sum_probs=141.9
Q ss_pred eEEEEEe-ccCC-CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-EEecCCCceEEEEecCCCCC
Q 020480 116 VQIIQQI-NHDG-EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHSTEGYGLSWSKFKEG 192 (325)
Q Consensus 116 ~~~~~~~-~h~~-~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~ 192 (325)
+.++..+ +|.. .|.+++|+|++ .+||+|+.|+.|+||++.. +...... ...+|...|.+++|+|++.
T Consensus 5 ~~~~~~~~~h~~~~v~~l~~sp~g-~~las~~~D~~i~iw~~~~--------~~~~~~~~~~~~h~~~v~~~~~sp~g~- 74 (345)
T 3fm0_A 5 LVLLGRVPAHPDSRCWFLAWNPAG-TLLASCGGDRRIRIWGTEG--------DSWICKSVLSEGHQRTVRKVAWSPCGN- 74 (345)
T ss_dssp EEEEEEECCSTTSCEEEEEECTTS-SCEEEEETTSCEEEEEEET--------TEEEEEEEECSSCSSCEEEEEECTTSS-
T ss_pred EEEeeeecCCCCCcEEEEEECCCC-CEEEEEcCCCeEEEEEcCC--------CcceeeeeeccccCCcEEEEEECCCCC-
Confidence 3444444 6877 99999999998 7999999999999999876 2111111 2358999999999999998
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc
Q 020480 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH 272 (325)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h 272 (325)
+|++|+.|+.+++||+..... .++..+.+|...|.+++|+|++ .+|++|+.|++|++||++.......+..+.+|
T Consensus 75 ~l~s~s~D~~v~iw~~~~~~~----~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h 149 (345)
T 3fm0_A 75 YLASASFDATTCIWKKNQDDF----ECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVLNSH 149 (345)
T ss_dssp EEEEEETTSCEEEEEECCC-E----EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEECCC
T ss_pred EEEEEECCCcEEEEEccCCCe----EEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEecCc
Confidence 899999999999999876532 4567788999999999999987 79999999999999999887643345667889
Q ss_pred CCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 273 QSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 273 ~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
...|.+++|+|++.+ +++.|+++++|+.+
T Consensus 150 ~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 150 TQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp CSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 999999999999985 88999999999865
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.94 E-value=2.4e-24 Score=185.68 Aligned_cols=202 Identities=15% Similarity=0.226 Sum_probs=164.6
Q ss_pred hhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCC
Q 020480 35 VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (325)
Q Consensus 35 ~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (325)
+..|.. ++.+++|.|++. .++.|+.. ..+.+|+.. .+
T Consensus 19 ~~gh~~--~v~~~~~s~~~~----------~l~s~~~d-----g~i~iw~~~--------------------------~~ 55 (312)
T 4ery_A 19 LAGHTK--AVSSVKFSPNGE----------WLASSSAD-----KLIKIWGAY--------------------------DG 55 (312)
T ss_dssp ECCCSS--CEEEEEECTTSS----------EEEEEETT-----SCEEEEETT--------------------------TC
T ss_pred EcccCC--cEEEEEECCCCC----------EEEEeeCC-----CeEEEEeCC--------------------------Cc
Confidence 344443 588999999764 45555542 367777542 12
Q ss_pred ceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
+.. .....|...|.+++|+|++ ++|++|+.||.|++||+.. ...+..+.+|...|.+++|+|++. +|
T Consensus 56 ~~~-~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~~~~~~-~l 122 (312)
T 4ery_A 56 KFE-KTISGHKLGISDVAWSSDS-NLLVSASDDKTLKIWDVSS----------GKCLKTLKGHSNYVFCCNFNPQSN-LI 122 (312)
T ss_dssp CEE-EEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EE
T ss_pred ccc-hhhccCCCceEEEEEcCCC-CEEEEECCCCEEEEEECCC----------CcEEEEEcCCCCCEEEEEEcCCCC-EE
Confidence 222 2345799999999999988 7999999999999999987 345778899999999999999998 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccC
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQ 273 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~ 273 (325)
++|+.|+.|++||++.+ .++..+..|...|.+++|+|++ .+|++|+.||.|++||+++++. +..+ ..+.
T Consensus 123 ~s~~~d~~i~iwd~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~---~~~~~~~~~ 192 (312)
T 4ery_A 123 VSGSFDESVRIWDVKTG------KCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQC---LKTLIDDDN 192 (312)
T ss_dssp EEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCE---EEEECCSSC
T ss_pred EEEeCCCcEEEEECCCC------EEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCce---eeEEeccCC
Confidence 99999999999999876 4577788899999999999987 6999999999999999998874 5554 4567
Q ss_pred CCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 274 SEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 274 ~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.++.+++|+|++.+ +++.|+.+++|+++.
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 223 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATLDNTLKLWDYSK 223 (312)
T ss_dssp CCEEEEEECTTSSEEEEEETTTEEEEEETTT
T ss_pred CceEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 78999999999984 788999999998754
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=3.4e-25 Score=206.64 Aligned_cols=212 Identities=21% Similarity=0.296 Sum_probs=170.6
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+.. +...+..|. -++.+++|+|++. .++.+.. +..+.+|+. .
T Consensus 364 ~dg~v~~~~~~~~-~~~~~~~~~--~~v~~~~~s~dg~----------~l~~~~~-----d~~v~~~~~--~-------- 415 (577)
T 2ymu_A 364 DDKTVKLWNRNGQ-LLQTLTGHS--SSVRGVAFSPDGQ----------TIASASD-----DKTVKLWNR--N-------- 415 (577)
T ss_dssp TTSEEEEEETTCC-EEEEEECCS--SCEEEEEECTTSS----------CEEEEET-----TSEEEEECT--T--------
T ss_pred CCCEEEEEcCCCC-EEEEecCCC--CCeEEEEECCCCC----------EEEEEeC-----CCEEEEEeC--C--------
Confidence 4567889987653 333444444 3588999999874 3555543 246777742 1
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
++ .......|...|++++|+|++ .+|++++.|+.|++|+... ..+..+.+
T Consensus 416 -----------------~~-~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~-----------~~~~~~~~ 465 (577)
T 2ymu_A 416 -----------------GQ-LLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNG-----------QLLQTLTG 465 (577)
T ss_dssp -----------------CC-EEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTS-----------CEEEEEEC
T ss_pred -----------------CC-EEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCC-----------CEEEEEcC
Confidence 11 122346799999999999998 7999999999999999754 44678889
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
|...|.+++|+|++. +|++++.|+.|++||... .++..+.+|...|++++|+|++ .+||+++.||.|++||
T Consensus 466 ~~~~v~~~~~spd~~-~las~~~d~~i~iw~~~~-------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 466 HSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRNG-------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWN 536 (577)
T ss_dssp CSSCEEEEEECTTSC-EEEEEETTSEEEEEETTS-------CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEEC
T ss_pred CCCCEEEEEEcCCCC-EEEEEeCCCEEEEEcCCC-------CEEEEEeCCCCCEEEEEEcCCC-CEEEEEECcCEEEEEe
Confidence 999999999999998 899999999999999643 4677889999999999999997 6899999999999999
Q ss_pred ccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeee
Q 020480 257 LRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRH 299 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~ 299 (325)
. +++ .+..+.+|.+.|++++|+|+|++ +++.|+++++|+
T Consensus 537 ~-~~~---~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 537 R-NGQ---LLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp T-TSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred C-CCC---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 5 444 48888999999999999999985 889999999996
No 34
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.8e-24 Score=196.93 Aligned_cols=228 Identities=11% Similarity=0.127 Sum_probs=160.0
Q ss_pred CCCCceEEEEeeCCCCCCCCCcceEEEEEEecC--------------CCCCCCeEEEEEEECCCCCCCcccCCCCcccCC
Q 020480 40 LEWPSLTVEWLPDREEPPGKDYSVQKMILGTHT--------------SENEPNYLMLAQVQLPLDDSENDARHYDDDRSD 105 (325)
Q Consensus 40 ~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (325)
.+.++++++|+|+...... .-..+.+++|+.. +.+.++.|.+|++.-.
T Consensus 132 ~~~~V~sv~w~p~~~~~~~-~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~----------------- 193 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDI-GKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTS----------------- 193 (524)
T ss_dssp CCC--CCCSCEEECCCCSS-CSSEEEEEEEEEC------------------CEEEEEEEEETT-----------------
T ss_pred CCCceeEEEecccCCCCcc-CcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCC-----------------
Confidence 3678999999998632100 0023567776642 2334556777776411
Q ss_pred CCCCCCCCCceEEEE-EeccCCCeeEEEecCCC-----CcEEEEEecCCeEEEEeCCCCCCCCC-CCCCCCCcEEEecCC
Q 020480 106 FGGFGCANGKVQIIQ-QINHDGEVNRARYMPQN-----PFLIATKTVSAEVYVFDYSKHPSKPP-LDGACSPDLRLRGHS 178 (325)
Q Consensus 106 ~~~~~~~~~~~~~~~-~~~h~~~v~~v~~~~~~-----~~~la~g~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~h~ 178 (325)
........ ...|.+.|.+++|+|++ ..+||+|+.||+|++|++........ ......+...+.+|.
T Consensus 194 -------~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~ 266 (524)
T 2j04_B 194 -------TLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLAD 266 (524)
T ss_dssp -------TCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTT
T ss_pred -------CCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCC
Confidence 01111122 34578999999999961 26999999999999999976211000 000123456788999
Q ss_pred CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEE--EeecCCCcEEEEEecCCcEEEEE
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDV--AWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v--~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
..|++++|++. . .|++|+.||+|++||++.+. .+...+.+|...|.++ +|+|++..+||||+.|++|+|||
T Consensus 267 ~~v~sv~~s~~-~-~lasgs~DgtV~lWD~~~~~-----~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD 339 (524)
T 2j04_B 267 SLITTFDFLSP-T-TVVCGFKNGFVAEFDLTDPE-----VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFN 339 (524)
T ss_dssp TCEEEEEESSS-S-EEEEEETTSEEEEEETTBCS-----SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEEC
T ss_pred CCEEEEEecCC-C-eEEEEeCCCEEEEEECCCCC-----CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEE
Confidence 99999999985 3 79999999999999998753 2355678999999999 56776547999999999999999
Q ss_pred ccCCCCCCCeeEeeccCC--CeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 257 LRTPSVSKPVQSVVAHQS--EVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~--~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+++.+. +..+.+|.. .|.+++|+|++.. +++.|+++++|+++.
T Consensus 340 ~~~~~~---~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~ 386 (524)
T 2j04_B 340 PKDIAT---TKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA 386 (524)
T ss_dssp GGGHHH---HCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC
T ss_pred CCCCCc---ccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc
Confidence 998774 556666653 5889999998863 778899999998764
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=2.1e-24 Score=191.28 Aligned_cols=224 Identities=15% Similarity=0.190 Sum_probs=170.6
Q ss_pred HHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCC
Q 020480 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARH 98 (325)
Q Consensus 19 ~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 98 (325)
++..+|......++..+..|.. ++.+++|+|++. ..++.|+.. ..|.+|++.-.
T Consensus 53 ~~~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~---------~~l~s~~~d-----g~i~iwd~~~~---------- 106 (383)
T 3ei3_B 53 QEPFIRSLKSYKLHRTASPFDR--RVTSLEWHPTHP---------TTVAVGSKG-----GDIILWDYDVQ---------- 106 (383)
T ss_dssp HHHHHHHHTTCEEEEEECCCSS--CEEEEEECSSCT---------TEEEEEEBT-----SCEEEEETTST----------
T ss_pred hccccccccccceEEeccCCCC--CEEEEEECCCCC---------CEEEEEcCC-----CeEEEEeCCCc----------
Confidence 3345565555555555555654 488999999873 146666643 36888865310
Q ss_pred CCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--
Q 020480 99 YDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-- 176 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-- 176 (325)
.........+|.+.|.+++|+|++..+|++|+.||.|++||+.. .....+..
T Consensus 107 ---------------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----------~~~~~~~~~~ 160 (383)
T 3ei3_B 107 ---------------NKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-----------SVIQVFAKTD 160 (383)
T ss_dssp ---------------TCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-----------CEEEEEECCC
T ss_pred ---------------ccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-----------CceEEEeccC
Confidence 11222222469999999999995448999999999999999985 22444443
Q ss_pred -CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 177 -HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 177 -h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
|...|.+++|+|++. +|++|+.|+.|++||++. .++..+.+|...|.+++|+|++..++++|+.|+.|++|
T Consensus 161 ~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~-------~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLDG-------HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp CSSCCEEEEEEETTTT-EEEEEETTSEEEEEETTS-------CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCCCeEEEEECCCCC-EEEEECCCCCEEEEECCC-------CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 448899999999998 899999999999999953 46778889999999999999986599999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCC-CCCc--cCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNA-SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p-~~~~--~~~~d~~~~~~~~~~ 302 (325)
|+++.+.........+|...|.+++|+| ++.+ +++.|+.+++|+++.
T Consensus 233 d~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp EGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred eCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 9998543212333347999999999999 8874 788999999999764
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.9e-25 Score=193.26 Aligned_cols=233 Identities=17% Similarity=0.265 Sum_probs=177.5
Q ss_pred hHHHHhhhHhc--ChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKN--TPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~--~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+..++||+.+ ...+...+..|. -++.+++|.|+... ..++.+... ..+.+|++.
T Consensus 31 ~dg~i~iw~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~--------~~l~s~~~d-----g~v~iwd~~-------- 87 (379)
T 3jrp_A 31 SDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFG--------TILASCSYD-----GKVLIWKEE-------- 87 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCS--SCEEEEEECCGGGC--------SEEEEEETT-----SCEEEEEEE--------
T ss_pred CCCcEEEEecCCCcceeeeEecCCC--CcEEEEEeCCCCCC--------CEEEEeccC-----CEEEEEEcC--------
Confidence 46679999987 434444444454 45899999876321 256565542 479999885
Q ss_pred ccCCCCcccCCCCCCCCCCCce-EEEEEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 95 DARHYDDDRSDFGGFGCANGKV-QIIQQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
.++. .......|...|.+++|+|+ + .+|++|+.||.|++||+.. ......
T Consensus 88 ------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~--------~~~~~~ 140 (379)
T 3jrp_A 88 ------------------NGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKE--------NGTTSP 140 (379)
T ss_dssp ------------------TTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCT--------TSCCCE
T ss_pred ------------------CCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCC--------CCceee
Confidence 1222 22334469999999999998 6 7999999999999999987 333445
Q ss_pred EEEecCCCceEEEEecC-------------CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC
Q 020480 172 LRLRGHSTEGYGLSWSK-------------FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238 (325)
Q Consensus 172 ~~~~~h~~~v~~l~~~p-------------~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 238 (325)
..+.+|...|.+++|+| ++. ++++|+.||.|++||++..... ......+.+|...|.+++|+|+
T Consensus 141 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~--~~~~~~~~~h~~~v~~~~~sp~ 217 (379)
T 3jrp_A 141 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQT--YVLESTLEGHSDWVRDVAWSPT 217 (379)
T ss_dssp EEEECCTTCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTE--EEEEEEECCCSSCEEEEEECCC
T ss_pred EEecCCCCceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcc--eeeEEEEecccCcEeEEEECCC
Confidence 67789999999999999 466 8999999999999999876431 1245677889999999999998
Q ss_pred C--CcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 239 H--EYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 239 ~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+ ..+|++++.||.|++||++........... ..|...|.+++|+|++.+ +++.|+.+++|++..
T Consensus 218 ~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 218 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred CCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 3 479999999999999999987531112222 348889999999999985 678899999999763
No 37
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=4.4e-25 Score=199.06 Aligned_cols=239 Identities=15% Similarity=0.244 Sum_probs=181.3
Q ss_pred HHHHhhhHhcC----------hhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEEC
Q 020480 18 NEEYKIWKKNT----------PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL 87 (325)
Q Consensus 18 ~~~~~iw~~~~----------~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~ 87 (325)
+.++++|+... ......+..|.. ++.+++|.|.... .++.|.. +..|.+|++.-
T Consensus 150 dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~~~~~~~---------~l~s~~~-----dg~i~vwd~~~ 213 (430)
T 2xyi_A 150 SSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQK--EGYGLSWNPNLNG---------YLLSASD-----DHTICLWDINA 213 (430)
T ss_dssp SSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSS--CCCCEEECTTSTT---------EEEEECT-----TSCEEEEETTS
T ss_pred CCcEEEEECCCcccccCccccCCCcEEecCCCC--CeEEEEeCCCCCC---------eEEEEeC-----CCeEEEEeCCC
Confidence 46788998875 222333344443 4788999998642 3555543 34788887631
Q ss_pred CCCCCCcccCCCCcccCCCCCCCCCCCceEE-EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCC
Q 020480 88 PLDDSENDARHYDDDRSDFGGFGCANGKVQI-IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG 166 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~ 166 (325)
.. . ....+.. .....|.+.|.+++|+|.+..+|++|+.||.|++||++.. .
T Consensus 214 ~~-----------~----------~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~-------~ 265 (430)
T 2xyi_A 214 TP-----------K----------EHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNN-------N 265 (430)
T ss_dssp CC-----------B----------GGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCS-------C
T ss_pred CC-----------C----------CCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCC-------C
Confidence 10 0 0011111 2234799999999999966689999999999999999861 1
Q ss_pred CCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEE
Q 020480 167 ACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV 246 (325)
Q Consensus 167 ~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~ 246 (325)
...++..+..|...|.+++|+|++..++++|+.||.|++||++... .++..+..|...|.+++|+|++..+|+++
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~-----~~~~~~~~h~~~v~~i~~sp~~~~~l~s~ 340 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLK-----LKLHSFESHKDEIFQVQWSPHNETILASS 340 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTT-----SCSEEEECCSSCEEEEEECSSCTTEEEEE
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCC-----CCeEEeecCCCCEEEEEECCCCCCEEEEE
Confidence 1356777889999999999999998789999999999999999743 35777888999999999999987899999
Q ss_pred ecCCcEEEEEccCCCC-----------CCCeeEeeccCCCeeEEEeCCCCC-c--cCCCCceEEeeecceeee
Q 020480 247 GDDQYLLIWDLRTPSV-----------SKPVQSVVAHQSEVGVSILNASFR-L--SHEDTCTCTHRHSRYLLY 305 (325)
Q Consensus 247 ~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~i~~~p~~~-~--~~~~d~~~~~~~~~~~~~ 305 (325)
+.||.|++||++.... ...+..+.+|...|++++|+|++. + +++.|+.+++|++....+
T Consensus 341 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~~~ 413 (430)
T 2xyi_A 341 GTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVY 413 (430)
T ss_dssp ETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHHHH
T ss_pred eCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccccc
Confidence 9999999999987331 124566678999999999999988 3 788999999998865443
No 38
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=1.9e-24 Score=186.23 Aligned_cols=161 Identities=20% Similarity=0.316 Sum_probs=144.9
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
...+|.+.|++++|+|++ .+|++|+.||.|++|++.. ......+.+|...|.+++|+|++. +|++|+.
T Consensus 18 ~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~----------~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~ 85 (312)
T 4ery_A 18 TLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYD----------GKFEKTISGHKLGISDVAWSSDSN-LLVSASD 85 (312)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCC----------cccchhhccCCCceEEEEEcCCCC-EEEEECC
Confidence 345799999999999998 7999999999999999876 344667889999999999999998 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVS 279 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i 279 (325)
|+.|++||++.+ .++..+.+|...|.+++|+|++ .+|++|+.||.|++||+++++. +..+..|..+|.++
T Consensus 86 d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~v~~~ 155 (312)
T 4ery_A 86 DKTLKIWDVSSG------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKC---LKTLPAHSDPVSAV 155 (312)
T ss_dssp TSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEE
T ss_pred CCEEEEEECCCC------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEE---EEEecCCCCcEEEE
Confidence 999999999876 4577889999999999999987 6999999999999999998874 78888999999999
Q ss_pred EeCCCCCc--cCCCCceEEeeecce
Q 020480 280 ILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 280 ~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+|+|++.+ +++.|+.+++|+++.
T Consensus 156 ~~~~~~~~l~~~~~d~~i~~wd~~~ 180 (312)
T 4ery_A 156 HFNRDGSLIVSSSYDGLCRIWDTAS 180 (312)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCC
Confidence 99999984 888999999999754
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=9.7e-25 Score=190.93 Aligned_cols=221 Identities=17% Similarity=0.185 Sum_probs=166.4
Q ss_pred hhhHHHHhhhHhcChh-------HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEEC
Q 020480 15 RLINEEYKIWKKNTPF-------LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQL 87 (325)
Q Consensus 15 ~~~~~~~~iw~~~~~~-------~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~ 87 (325)
...|.++|+|+..... ....+..|.. ++.+++|.|+.. .++.|+. +..+.+|++.
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~--~V~~~~~~~~~~----------~l~s~s~-----D~~v~lwd~~- 106 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH--FVSDLALSQENC----------FAISSSW-----DKTLRLWDLR- 106 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSS--CEEEEEECSSTT----------EEEEEET-----TSEEEEEETT-
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCC--ceEEEEECCCCC----------EEEEEcC-----CCcEEEEECC-
Confidence 3467889999986432 1223344443 588999999764 4555543 3478888652
Q ss_pred CCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC
Q 020480 88 PLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA 167 (325)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~ 167 (325)
.++ ......+|.+.|.+++|+|++ .+|++|+.|+.|++||+..
T Consensus 107 -------------------------~~~-~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~---------- 149 (343)
T 2xzm_R 107 -------------------------TGT-TYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILG---------- 149 (343)
T ss_dssp -------------------------SSC-EEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSS----------
T ss_pred -------------------------CCc-EEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccC----------
Confidence 112 122345799999999999998 7999999999999999874
Q ss_pred CCCcEEE---ecCCCceEEEEecCCCC---------CeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEe
Q 020480 168 CSPDLRL---RGHSTEGYGLSWSKFKE---------GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW 235 (325)
Q Consensus 168 ~~~~~~~---~~h~~~v~~l~~~p~~~---------~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~ 235 (325)
...... .+|...|.+++|+|.+. .+|++++.||.|++||... .....+.+|...|.+++|
T Consensus 150 -~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 150 -ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-------QIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp -CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-------EEEEEEECCSSCEEEEEE
T ss_pred -CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-------ceeEEEcCccccceEEEE
Confidence 111222 26889999999999872 3899999999999999542 356678899999999999
Q ss_pred ecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 236 HLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 236 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
+|++ .+|++|+.||.|++||++.... +...+ .+...|.+++|+|++.+ +++.|+.+++|++..
T Consensus 222 s~~g-~~l~sgs~dg~v~iwd~~~~~~--~~~~~-~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~ 285 (343)
T 2xzm_R 222 SPNG-KYIATGGKDKKLLIWDILNLTY--PQREF-DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMT 285 (343)
T ss_dssp CTTS-SEEEEEETTCEEEEEESSCCSS--CSEEE-ECSSCEEEEEECSSSCEEEEEESSCEEEEESSS
T ss_pred CCCC-CEEEEEcCCCeEEEEECCCCcc--cceee-cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 9997 6999999999999999965543 34443 35667999999999986 666788999998743
No 40
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=4.1e-25 Score=195.03 Aligned_cols=166 Identities=13% Similarity=0.069 Sum_probs=132.9
Q ss_pred EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 119 ~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
...+.|.+.|.+++|+|++ +++++++.++ +.+|+... +.........+|...|.+++|+|++. .+++++
T Consensus 170 ~~~~~~~~~V~~v~fspdg-~~l~s~s~~~-~~~~~~~~--------~~~~~~~~~~~~~~~v~~v~fspdg~-~l~~~s 238 (365)
T 4h5i_A 170 KFEIETRGEVKDLHFSTDG-KVVAYITGSS-LEVISTVT--------GSCIARKTDFDKNWSLSKINFIADDT-VLIAAS 238 (365)
T ss_dssp EEEEECSSCCCEEEECTTS-SEEEEECSSC-EEEEETTT--------CCEEEEECCCCTTEEEEEEEEEETTE-EEEEEE
T ss_pred EEEeCCCCceEEEEEccCC-ceEEecccee-EEEEEecc--------CcceeeeecCCCCCCEEEEEEcCCCC-EEEEEe
Confidence 3456789999999999999 7899988665 55565554 22222223457888999999999998 899998
Q ss_pred CCC----cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccC
Q 020480 199 DDA----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQ 273 (325)
Q Consensus 199 ~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~ 273 (325)
.|+ .+++|++..... .......+.+|...|++++|+|++ .+||+|+.|++|+|||+++++. +..+ .+|.
T Consensus 239 ~d~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd~~~~~~---~~~~~~gH~ 312 (365)
T 4h5i_A 239 LKKGKGIVLTKISIKSGNT--SVLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVKLKDLSM---SKIFKQAHS 312 (365)
T ss_dssp ESSSCCEEEEEEEEETTEE--EEEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEE---EEEETTSSS
T ss_pred cCCcceeEEeeccccccee--cceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEECCCCcE---EEEecCccc
Confidence 887 688898876532 112245567899999999999997 6999999999999999999873 7664 7899
Q ss_pred CCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 274 SEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 274 ~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
.+|++|+|+|+|++ +++.|+++++|++.
T Consensus 313 ~~V~~v~fSpdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 313 FAITEVTISPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEECC
T ss_pred CCEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 99999999999985 89999999999975
No 41
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.93 E-value=1e-24 Score=188.94 Aligned_cols=219 Identities=14% Similarity=0.134 Sum_probs=170.3
Q ss_pred hhHHHHhhhHhcChh-----HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCC
Q 020480 16 LINEEYKIWKKNTPF-----LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD 90 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~-----~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~ 90 (325)
..|.++++|+..... ....+..|.. ++.+++|.|++. .++.|+. +..|.+|++.
T Consensus 37 s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~--~v~~~~~s~dg~----------~l~s~s~-----D~~v~~wd~~---- 95 (319)
T 3frx_A 37 SRDKTLISWKLTGDDQKFGVPVRSFKGHSH--IVQDCTLTADGA----------YALSASW-----DKTLRLWDVA---- 95 (319)
T ss_dssp ETTSEEEEEEEEEETTEEEEEEEEEECCSS--CEEEEEECTTSS----------EEEEEET-----TSEEEEEETT----
T ss_pred cCCccEEEecCCCCCccccccceEEeCCcc--cEEEEEECCCCC----------EEEEEeC-----CCEEEEEECC----
Confidence 467889999876422 1123334443 588999999874 4555554 3478888752
Q ss_pred CCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCC
Q 020480 91 DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP 170 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~ 170 (325)
.++ ......+|.+.|.+++|+|++ .+|++|+.|+.|++||++. ..
T Consensus 96 ----------------------~~~-~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~-----------~~ 140 (319)
T 3frx_A 96 ----------------------TGE-TYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKG-----------QC 140 (319)
T ss_dssp ----------------------TTE-EEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTS-----------CE
T ss_pred ----------------------CCC-eeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC-----------Ce
Confidence 122 223456799999999999988 7999999999999999975 44
Q ss_pred cEEEecCCCceEEEEecCCCC-----CeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEE
Q 020480 171 DLRLRGHSTEGYGLSWSKFKE-----GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS 245 (325)
Q Consensus 171 ~~~~~~h~~~v~~l~~~p~~~-----~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s 245 (325)
+..+.+|...|.++.|+|... ..+++++.|+.|++||++.. .....+.+|...|.+++|+|++ .+|++
T Consensus 141 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~------~~~~~~~~h~~~v~~~~~sp~g-~~l~s 213 (319)
T 3frx_A 141 LATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF------QIEADFIGHNSNINTLTASPDG-TLIAS 213 (319)
T ss_dssp EEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT------EEEEEECCCCSCEEEEEECTTS-SEEEE
T ss_pred EEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc------hhheeecCCCCcEEEEEEcCCC-CEEEE
Confidence 677889999999999998532 27999999999999999876 4567788999999999999987 69999
Q ss_pred EecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeecc
Q 020480 246 VGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSR 301 (325)
Q Consensus 246 ~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~ 301 (325)
|+.||.|++||+++.+. +..+.. ...|.+++|+|++.+ .++.+..+++|++.
T Consensus 214 ~~~dg~i~iwd~~~~~~---~~~~~~-~~~v~~~~~sp~~~~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 214 AGKDGEIMLWNLAAKKA---MYTLSA-QDEVFSLAFSPNRYWLAAATATGIKVFSLD 266 (319)
T ss_dssp EETTCEEEEEETTTTEE---EEEEEC-CSCEEEEEECSSSSEEEEEETTEEEEEEET
T ss_pred EeCCCeEEEEECCCCcE---EEEecC-CCcEEEEEEcCCCCEEEEEcCCCcEEEEeC
Confidence 99999999999998873 666654 568999999999985 44456668888754
No 42
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=5.8e-24 Score=185.98 Aligned_cols=162 Identities=19% Similarity=0.212 Sum_probs=136.5
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
...+|...|++++|+|++ .++++|+.|+.|++||+.. ...+..+.+|...|.+++|+|++. +|++|+.
T Consensus 71 ~l~~h~~~V~~~~~~~~~-~~l~s~s~D~~v~lwd~~~----------~~~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~ 138 (343)
T 2xzm_R 71 ALTGHNHFVSDLALSQEN-CFAISSSWDKTLRLWDLRT----------GTTYKRFVGHQSEVYSVAFSPDNR-QILSAGA 138 (343)
T ss_dssp EECCCSSCEEEEEECSST-TEEEEEETTSEEEEEETTS----------SCEEEEEECCCSCEEEEEECSSTT-EEEEEET
T ss_pred hhccCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCC----------CcEEEEEcCCCCcEEEEEECCCCC-EEEEEcC
Confidence 456799999999999988 7999999999999999987 345678899999999999999998 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC---------cEEEEEecCCcEEEEEccCCCCCCCeeEee
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE---------YLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 270 (325)
|+.|++||+..... ........|...|.+++|+|.+. .+|++++.||.|++||.+. . ....+.
T Consensus 139 d~~i~~wd~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~---~~~~~~ 210 (343)
T 2xzm_R 139 EREIKLWNILGECK----FSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-Q---IRYTFK 210 (343)
T ss_dssp TSCEEEEESSSCEE----EECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-E---EEEEEE
T ss_pred CCEEEEEeccCCce----eeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-c---eeEEEc
Confidence 99999999974311 11111236888999999999752 5899999999999999432 2 366778
Q ss_pred ccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 271 AHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 271 ~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+|...|++++|+|+|++ +++.|+++++|+++
T Consensus 211 ~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 211 AHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred CccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999985 88999999999983
No 43
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.93 E-value=3.2e-25 Score=198.22 Aligned_cols=240 Identities=15% Similarity=0.227 Sum_probs=178.6
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..+..+++|+.........+......-++.+++|.|++. .++.|... ..+.+|++.-.
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~----------~l~~~~~d-----g~v~vw~~~~~------- 99 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNK----------IIAGALDN-----GSLELYSTNEA------- 99 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSS----------CEEEEESS-----SCEEEECCSST-------
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCC----------eEEEEccC-----CeEEEeecccc-------
Confidence 345689999998875443333334455789999999874 45555542 36888866311
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
..+.-.......|.+.|++++|+|++..+|++|+.||.|++||+......... ........+.
T Consensus 100 ----------------~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~ 162 (416)
T 2pm9_A 100 ----------------NNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSN-YTPLTPGQSM 162 (416)
T ss_dssp ----------------TSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTT-CCCBCCCCSC
T ss_pred ----------------cccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccc-cccccccccc
Confidence 00111233445799999999999984489999999999999999872210000 0011122346
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecC------CccEEEEEeecCCCcEEEEEecC
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH------EGVVEDVAWHLRHEYLFGSVGDD 249 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~------~~~v~~v~~~p~~~~~l~s~~~d 249 (325)
+|...|.+++|+|++..+|++++.||.|++||++.+ ..+..+..+ ...|.+++|+|++..++++++.|
T Consensus 163 ~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 163 SSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK------KEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGS 236 (416)
T ss_dssp CSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT------EEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECC
T ss_pred CCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC------CcceEEeccccccccCCceEEEEECCCCCCEEEEEECC
Confidence 789999999999995559999999999999999986 345555555 78899999999987899999999
Q ss_pred C---cEEEEEccCCCCCCCeeEee-ccCCCeeEEEeCC-CCCc--cCCCCceEEeeecce
Q 020480 250 Q---YLLIWDLRTPSVSKPVQSVV-AHQSEVGVSILNA-SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 250 g---~i~iwd~~~~~~~~~~~~~~-~h~~~v~~i~~~p-~~~~--~~~~d~~~~~~~~~~ 302 (325)
+ .|++||+++... ++..+. +|...|.+++|+| ++.+ +++.|+++++|+++.
T Consensus 237 ~~~~~i~~~d~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~ 294 (416)
T 2pm9_A 237 DNDPSILIWDLRNANT--PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES 294 (416)
T ss_dssp SSSCCCCEEETTSTTS--CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS
T ss_pred CCCceEEEEeCCCCCC--CcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC
Confidence 9 999999998743 467777 8999999999999 7764 888999999999754
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=1.8e-24 Score=194.48 Aligned_cols=253 Identities=16% Similarity=0.226 Sum_probs=182.6
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCC-----CC
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPL-----DD 91 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~-----~~ 91 (325)
.+.+++||+.+++.+...+..+...-++.+++|+|++. .++.|+... .+.+|++.-.. ..
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~----------~lasgs~Dg-----~v~iWd~~~~~~~~~~~~ 187 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN----------YLAVGTSSA-----EVQLWDVQQQKRLRNMTS 187 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS----------EEEEEETTS-----CEEEEETTTTEEEEEECC
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCC----------EEEEEECCC-----eEEEEEcCCCcEEEEEeC
Confidence 46889999999887776666555556799999999875 455555432 45555432000 00
Q ss_pred CCcccC--C-------CCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCC
Q 020480 92 SENDAR--H-------YDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP 162 (325)
Q Consensus 92 ~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~ 162 (325)
...... . .....+.+..|..............|...+..+.|+|++ .++++++.|+.|++|+.....
T Consensus 188 h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~--- 263 (420)
T 4gga_A 188 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGE--- 263 (420)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCS---
T ss_pred CCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeecccc---
Confidence 000000 0 000111222233333334444556799999999999998 799999999999999997621
Q ss_pred CCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEE--eCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC
Q 020480 163 PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG--SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240 (325)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~--s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 240 (325)
.....+.....|...|.+++|+|.+..+++++ +.|+.|++||++++ .+...+..| ..+.++.|+|++.
T Consensus 264 ---~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~------~~~~~~~~~-~~v~~~~~~~~~~ 333 (420)
T 4gga_A 264 ---GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG------ACLSAVDAH-SQVCSILWSPHYK 333 (420)
T ss_dssp ---SCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT------EEEEEEECS-SCEEEEEEETTTT
T ss_pred ---ccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc------ccceeeccc-cceeeeeecCCCC
Confidence 12345677788999999999999988777764 57999999999987 445555544 5688999999875
Q ss_pred cEEEEEe--cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 241 YLFGSVG--DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 241 ~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.+++++ .|+.|+|||+++++ ++..+.+|.+.|++++|+|+|.+ +++.|+++++|++..
T Consensus 334 -~lv~~sg~~d~~I~iwd~~~~~---~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 334 -ELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp -EEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred -eEEEEEecCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 554443 79999999999988 48999999999999999999985 899999999999754
No 45
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=1.6e-24 Score=191.98 Aligned_cols=227 Identities=10% Similarity=0.067 Sum_probs=171.9
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.+++||+.+.......+......-++.+++|+|+.. ..++.++. +..+.+|++.
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~---------~~l~s~~~-----d~~i~iwd~~---------- 149 (383)
T 3ei3_B 94 KGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNT---------NQLFVSSI-----RGATTLRDFS---------- 149 (383)
T ss_dssp BTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEE---------EEEEEEET-----TTEEEEEETT----------
T ss_pred CCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCC---------CEEEEEeC-----CCEEEEEECC----------
Confidence 46789999998766554444333445689999999431 34555553 3478888652
Q ss_pred CCCCcccCCCCCCCCCCCceEEE-EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 97 RHYDDDRSDFGGFGCANGKVQII-QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
...+... ....|...|.+++|+|++ .+|++|+.||.|++||++. .++..+.
T Consensus 150 ----------------~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~-----------~~~~~~~ 201 (383)
T 3ei3_B 150 ----------------GSVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLDG-----------HEIFKEK 201 (383)
T ss_dssp ----------------SCEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETTS-----------CEEEEEE
T ss_pred ----------------CCceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECCC-----------CEEEEec
Confidence 1112211 112356889999999998 7999999999999999954 5577888
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeec-CCCcEEEEEecCCcEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGDDQYLLI 254 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~l~s~~~dg~i~i 254 (325)
+|...|.+++|+|++..++++|+.|+.|++||++...... .++..+ +|...|.+++|+| ++ .+|++++.|+.|++
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~--~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~i 277 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN--SYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRV 277 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT--CEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc--ceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEE
Confidence 9999999999999998789999999999999999753221 234444 6999999999999 76 69999999999999
Q ss_pred EEccCCCCCCCeeEeeccC-----------------CCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 255 WDLRTPSVSKPVQSVVAHQ-----------------SEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~-----------------~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
||+++... +..+..|. ..+..++|+|+++++++.|+.+++|++..
T Consensus 278 wd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~ 339 (383)
T 3ei3_B 278 YSSYDWSK---PDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANS 339 (383)
T ss_dssp EETTBTTS---CSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTT
T ss_pred EECCCCcc---ccccccccccccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCC
Confidence 99998875 34443332 34556888898888889999999999753
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6e-24 Score=187.24 Aligned_cols=212 Identities=15% Similarity=0.184 Sum_probs=167.5
Q ss_pred HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCC
Q 020480 34 LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN 113 (325)
Q Consensus 34 ~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (325)
.+..|.. ++.+++|+|++. .++.|.. +..|.+|++.-
T Consensus 6 ~~~~h~~--~v~~~~~s~~~~----------~l~~~~~-----dg~i~iw~~~~-------------------------- 42 (379)
T 3jrp_A 6 IANAHNE--LIHDAVLDYYGK----------RLATCSS-----DKTIKIFEVEG-------------------------- 42 (379)
T ss_dssp CEEECCC--CEEEEEECSSSS----------EEEEEET-----TSCEEEEEEET--------------------------
T ss_pred EecCCcc--cEEEEEEcCCCC----------EEEEEEC-----CCcEEEEecCC--------------------------
Confidence 3444554 489999999874 5666654 24799998851
Q ss_pred CceEEE-EEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC-
Q 020480 114 GKVQII-QQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF- 189 (325)
Q Consensus 114 ~~~~~~-~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~- 189 (325)
+..+.. ....|.+.|++++|+++ + .+|++|+.||.|++||+.. +....+..+.+|...|.+++|+|+
T Consensus 43 ~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iwd~~~--------~~~~~~~~~~~~~~~v~~~~~~~~~ 113 (379)
T 3jrp_A 43 ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHE 113 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGG
T ss_pred CcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEEEEcCC--------CceeEeeeecCCCcceEEEEeCCCC
Confidence 122232 34469999999999976 5 7999999999999999987 332356677889999999999999
Q ss_pred -CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC------------CCcEEEEEecCCcEEEEE
Q 020480 190 -KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR------------HEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 190 -~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~------------~~~~l~s~~~dg~i~iwd 256 (325)
+. +|++++.||.|++||++.... .....+..|...|.+++|+|. +..++++|+.||.|++||
T Consensus 114 ~~~-~l~~~~~d~~i~v~d~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d 188 (379)
T 3jrp_A 114 YGP-LLLVASSDGKVSVVEFKENGT----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK 188 (379)
T ss_dssp GCS-EEEEEETTSEEEEEECCTTSC----CCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEE
T ss_pred CCC-EEEEecCCCcEEEEecCCCCc----eeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEE
Confidence 77 899999999999999987643 234466789999999999994 247999999999999999
Q ss_pred ccCCCCC-CCeeEeeccCCCeeEEEeCCC---CCc--cCCCCceEEeeecce
Q 020480 257 LRTPSVS-KPVQSVVAHQSEVGVSILNAS---FRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 257 ~~~~~~~-~~~~~~~~h~~~v~~i~~~p~---~~~--~~~~d~~~~~~~~~~ 302 (325)
++..... ..+..+.+|...|.+++|+|+ +.+ +++.|+.+++|+++.
T Consensus 189 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~ 240 (379)
T 3jrp_A 189 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 240 (379)
T ss_dssp EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred ecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCC
Confidence 9987631 123566789999999999999 664 888999999998765
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=3.9e-24 Score=204.18 Aligned_cols=212 Identities=14% Similarity=0.108 Sum_probs=165.5
Q ss_pred hhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCC
Q 020480 35 VITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANG 114 (325)
Q Consensus 35 ~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (325)
+..|... +.+++|.|+.. ..++.|+. +..|.+|++.-.. ...
T Consensus 378 l~~H~~~--V~~v~~~~~~~---------~~l~s~s~-----D~~i~~W~~~~~~----------------------~~~ 419 (694)
T 3dm0_A 378 MRAHTDM--VTAIATPIDNA---------DIIVSASR-----DKSIILWKLTKDD----------------------KAY 419 (694)
T ss_dssp EECCSSC--EEEEECCTTCC---------SEEEEEET-----TSEEEEEECCCST----------------------TCS
T ss_pred cccCCce--eEEEEecCCCC---------CEEEEEeC-----CCcEEEEEccCCC----------------------ccc
Confidence 4445544 88888888653 24555554 2478999764110 001
Q ss_pred ceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
........+|...|.+++|+|++ .+|++|+.||.|++||+.. ......+.+|...|.+++|+|++. +|
T Consensus 420 ~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg~v~vwd~~~----------~~~~~~~~~h~~~v~~~~~s~~~~-~l 487 (694)
T 3dm0_A 420 GVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDGELRLWDLAA----------GVSTRRFVGHTKDVLSVAFSLDNR-QI 487 (694)
T ss_dssp CEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEECTTSS-CE
T ss_pred ccccceecCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEECCC----------CcceeEEeCCCCCEEEEEEeCCCC-EE
Confidence 12333456899999999999998 7999999999999999987 344677889999999999999998 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC-cEEEEEecCCcEEEEEccCCCCCCCeeEeeccC
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ 273 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~ 273 (325)
++|+.|++|++||+..... ........+|...|.+++|+|++. ..+++|+.|++|++||+++.+ ....+.+|.
T Consensus 488 ~s~s~D~~i~iwd~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~---~~~~~~~h~ 561 (694)
T 3dm0_A 488 VSASRDRTIKLWNTLGECK---YTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK---LRSTLAGHT 561 (694)
T ss_dssp EEEETTSCEEEECTTSCEE---EEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC---EEEEECCCS
T ss_pred EEEeCCCEEEEEECCCCcc---eeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc---EEEEEcCCC
Confidence 9999999999999865311 001111246888999999999752 589999999999999999877 377889999
Q ss_pred CCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 274 SEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 274 ~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
..|++++|+|++.+ +++.|+++++|+++.
T Consensus 562 ~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~ 592 (694)
T 3dm0_A 562 GYVSTVAVSPDGSLCASGGKDGVVLLWDLAE 592 (694)
T ss_dssp SCEEEEEECTTSSEEEEEETTSBCEEEETTT
T ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999985 889999999999754
No 48
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=3.5e-24 Score=190.91 Aligned_cols=198 Identities=15% Similarity=0.176 Sum_probs=151.9
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
.+.+++|+|++. .++.|.. +..|.+|++. .++ ......
T Consensus 125 ~v~~v~~s~dg~----------~l~s~~~-----d~~i~iwd~~--------------------------~~~-~~~~~~ 162 (393)
T 1erj_A 125 YIRSVCFSPDGK----------FLATGAE-----DRLIRIWDIE--------------------------NRK-IVMILQ 162 (393)
T ss_dssp BEEEEEECTTSS----------EEEEEET-----TSCEEEEETT--------------------------TTE-EEEEEC
T ss_pred eEEEEEECCCCC----------EEEEEcC-----CCeEEEEECC--------------------------CCc-EEEEEc
Confidence 367899999774 4555554 3478888652 112 122345
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecC-CCCCeEEEEeCCC
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK-FKEGHLLSGSDDA 201 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~s~dg 201 (325)
+|...|.+++|+|++ .+|++|+.|+.|++||+.. + .....+ .+...+.+++|+| ++. +|++|+.||
T Consensus 163 ~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~--------~--~~~~~~-~~~~~v~~~~~~~~~~~-~l~~~s~d~ 229 (393)
T 1erj_A 163 GHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRT--------G--QCSLTL-SIEDGVTTVAVSPGDGK-YIAAGSLDR 229 (393)
T ss_dssp CCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT--------T--EEEEEE-ECSSCEEEEEECSTTCC-EEEEEETTS
T ss_pred cCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCC--------C--eeEEEE-EcCCCcEEEEEECCCCC-EEEEEcCCC
Confidence 799999999999998 6999999999999999987 2 223344 3567899999999 566 999999999
Q ss_pred cEEEEeCCCCCCCCcccceEee-------ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC---------CC
Q 020480 202 QICLWDINAAPKNKSLEAMQIF-------KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS---------KP 265 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~---------~~ 265 (325)
.|++||++.+. .+..+ .+|...|.+++|+|++ .+|++|+.||.|++||++..... ..
T Consensus 230 ~v~iwd~~~~~------~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~ 302 (393)
T 1erj_A 230 AVRVWDSETGF------LVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTC 302 (393)
T ss_dssp CEEEEETTTCC------EEEEEC------CCCSSCEEEEEECTTS-SEEEEEETTSEEEEEEC---------------CE
T ss_pred cEEEEECCCCc------EEEeecccccCCCCCCCCEEEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcccccCCCCCcc
Confidence 99999998763 23333 5789999999999987 68999999999999999864321 12
Q ss_pred eeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 266 VQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 266 ~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
...+.+|...|.+++|+|++.+ +++.|+++++|+.+.
T Consensus 303 ~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~ 341 (393)
T 1erj_A 303 EVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKS 341 (393)
T ss_dssp EEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTT
T ss_pred eEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCC
Confidence 4566789999999999999874 889999999998753
No 49
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=7e-24 Score=197.73 Aligned_cols=214 Identities=21% Similarity=0.324 Sum_probs=171.8
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...+. .+..|. -++.+++|.|++. .++.|... ..+.+++. .
T Consensus 323 ~d~~i~~w~~~~~~~~-~~~~~~--~~v~~~~~s~~g~----------~l~~~~~d-----g~v~~~~~--~-------- 374 (577)
T 2ymu_A 323 DDKTVKLWNRNGQHLQ-TLTGHS--SSVWGVAFSPDGQ----------TIASASDD-----KTVKLWNR--N-------- 374 (577)
T ss_dssp TTSCEEEEETTSCEEE-EECCCS--SCEEEEEECTTSS----------EEEEEETT-----SEEEEEET--T--------
T ss_pred CCCeEEEEeCCCCeeE-EEeCCC--CCEEEEEECCCCC----------EEEEEeCC-----CEEEEEcC--C--------
Confidence 4567899998775443 223333 3578899999874 45555542 36777642 1
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
++. ......|...|.+++|+|++ .+|++|+.|+.|++|+... ..+..+.+
T Consensus 375 -----------------~~~-~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~~-----------~~~~~~~~ 424 (577)
T 2ymu_A 375 -----------------GQL-LQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNG-----------QLLQTLTG 424 (577)
T ss_dssp -----------------CCE-EEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTTC-----------CEEEEEEC
T ss_pred -----------------CCE-EEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCCC-----------CEEEEecC
Confidence 111 22345799999999999998 7999999999999999654 44677889
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
|...|++++|+|++. +|++++.|+.|++||... ..+..+.+|...|.+++|+|++ .+|++++.|+.|++||
T Consensus 425 ~~~~v~~~~~s~d~~-~l~~~~~d~~v~~w~~~~-------~~~~~~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~ 495 (577)
T 2ymu_A 425 HSSSVWGVAFSPDDQ-TIASASDDKTVKLWNRNG-------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWN 495 (577)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSEEEEEETTS-------CEEEEEECCSSCEEEEEECTTS-CEEEEEETTSEEEEEE
T ss_pred CCCCeEEEEECCCCC-EEEEEcCCCEEEEEECCC-------CEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEc
Confidence 999999999999998 899999999999999753 3577788999999999999997 6999999999999999
Q ss_pred ccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 257 LRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
. +++ .+..+.+|...|++++|+|+|++ +++.|+++++|+..
T Consensus 496 ~-~~~---~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~ 538 (577)
T 2ymu_A 496 R-NGQ---LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN 538 (577)
T ss_dssp T-TSC---EEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTT
T ss_pred C-CCC---EEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC
Confidence 5 444 47888999999999999999985 78899999999853
No 50
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=3.5e-25 Score=195.73 Aligned_cols=231 Identities=10% Similarity=0.109 Sum_probs=168.0
Q ss_pred hHHHHhhhHhcCh--hHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKNTP--FLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~~~--~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+.++++|+.... .+...+..|.. ++.+++|+|++. .++.++. +..+.+|++.-.
T Consensus 31 ~d~~i~iw~~~~~~~~~~~~~~~h~~--~v~~~~~s~~~~----------~l~s~s~-----d~~v~vwd~~~~------ 87 (377)
T 3dwl_C 31 ATNQVELYEQDGNGWKHARTFSDHDK--IVTCVDWAPKSN----------RIVTCSQ-----DRNAYVYEKRPD------ 87 (377)
T ss_dssp SSSCBCEEEEETTEEEECCCBCCCSS--CEEEEEECTTTC----------CEEEEET-----TSSEEEC-----------
T ss_pred CCCEEEEEEccCCceEEEEEEecCCc--eEEEEEEeCCCC----------EEEEEeC-----CCeEEEEEcCCC------
Confidence 4678999999876 55555555554 489999999864 4555553 346888877411
Q ss_pred ccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 95 DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
...........|...|.+++|+|++ ++|++|+.|+.|++||+... ........+
T Consensus 88 ------------------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~-------~~~~~~~~~ 141 (377)
T 3dwl_C 88 ------------------GTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQE-------NDWWVSKHL 141 (377)
T ss_dssp -------------------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC------------CCCCEEE
T ss_pred ------------------CceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCc-------ccceeeeEe
Confidence 0001122345799999999999988 79999999999999999871 112245667
Q ss_pred ec-CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCC------------CcccceEeeecCCccEEEEEeecCCCc
Q 020480 175 RG-HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN------------KSLEAMQIFKVHEGVVEDVAWHLRHEY 241 (325)
Q Consensus 175 ~~-h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~------------~~~~~~~~~~~~~~~v~~v~~~p~~~~ 241 (325)
.+ |...|.+++|+|++. +|++++.|+.|++||++..... ....++..+ +|...|.+++|+|++ .
T Consensus 142 ~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~-~ 218 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG-N 218 (377)
T ss_dssp CSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS-S
T ss_pred ecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC-C
Confidence 77 999999999999988 8999999999999998643211 011345556 899999999999987 6
Q ss_pred EEEEEecCCcEEEEEccCCCCC-CCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeec
Q 020480 242 LFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 242 ~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
+|++++.||.|++||+++.... ..+..+.+|..+|.+++|+|++++ +++.++.+ +|+.
T Consensus 219 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 219 ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 8999999999999999988731 015667889999999999999985 56666555 4443
No 51
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=1.6e-24 Score=194.17 Aligned_cols=217 Identities=10% Similarity=0.097 Sum_probs=164.7
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEE-EEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTV-EWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
.+..+++|+.........+..+ ....+ .|.|++. .++.|+.. ..+.+|++.
T Consensus 76 ~d~~v~i~d~~~~~~~~~~~~~----~~~~~~~~~~~~~----------~l~~~~~d-----g~i~iwd~~--------- 127 (420)
T 3vl1_A 76 LDGHDFLFNTIIRDGSKMLKRA----DYTAVDTAKLQMR----------RFILGTTE-----GDIKVLDSN--------- 127 (420)
T ss_dssp ETTEEEEEECCSEETTTTSCSC----CEEEEEEECSSSC----------EEEEEETT-----SCEEEECTT---------
T ss_pred cCCcEEEEEecccceeeEEecC----CceEEEEEecCCC----------EEEEEECC-----CCEEEEeCC---------
Confidence 3568899998877665544444 23333 4566553 46666542 367777531
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEE-eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQ-INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
.+ +.... ..|.+.|++++|+|++ .+|++|+.||.|++||+.. ...+..+
T Consensus 128 -----------------~~--~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~----------~~~~~~~ 177 (420)
T 3vl1_A 128 -----------------FN--LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKD----------GSNPRTL 177 (420)
T ss_dssp -----------------SC--EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------CCCCEEE
T ss_pred -----------------Cc--ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCC----------CcCceEE
Confidence 11 22233 3799999999999988 6999999999999999987 3557788
Q ss_pred ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeec---CC---------------------ccE
Q 020480 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV---HE---------------------GVV 230 (325)
Q Consensus 175 ~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~---~~---------------------~~v 230 (325)
.+|...|.+++|+|++. +|++++.||.|++||++.+ .++..+.. +. ..+
T Consensus 178 ~~h~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 178 IGHRATVTDIAIIDRGR-NVLSASLDGTIRLWECGTG------TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp ECCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT------EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred cCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEeECCCC------ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 99999999999999998 8999999999999999876 34444443 33 344
Q ss_pred EEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeCCCCC-c--cCCCCceEEeeecce
Q 020480 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILNASFR-L--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 231 ~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~p~~~-~--~~~~d~~~~~~~~~~ 302 (325)
.+++|+|++ .++++|+.||.|++||+++.+. +..+ ..|...|.+++|+|++. + +++.|+.+++|+++.
T Consensus 251 ~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 251 NNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQ---TIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp CTTCSSCTT-EEEEEEETTSCEEEEETTTCCE---EEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred cceEEcCCC-CEEEEEcCCCeEEEEECCCCce---eEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 445557776 6899999999999999998874 4444 56889999999999987 3 888999999999864
No 52
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=2.8e-24 Score=191.06 Aligned_cols=233 Identities=13% Similarity=0.083 Sum_probs=176.8
Q ss_pred hHHHHhhhHhcChhH-----HHHhhhcCCC---CCceEEEEe----eCCCCCCCCCcceEE-EEEEecCCCCCCCeEEEE
Q 020480 17 INEEYKIWKKNTPFL-----YDLVITHALE---WPSLTVEWL----PDREEPPGKDYSVQK-MILGTHTSENEPNYLMLA 83 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~-----y~~~~~~~~~---~p~~s~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~i~ 83 (325)
.+..+++|+.+.... ...+..|... -++.+++|. |+.. . ++.++.. +.+.+|
T Consensus 89 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----------~~l~~~~~d-----g~i~iw 153 (397)
T 1sq9_A 89 FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS----------HRLVATDVK-----GTTYIW 153 (397)
T ss_dssp TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C----------EEEEEEETT-----SCEEEE
T ss_pred CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc----------eEEEEEeCC-----CcEEEE
Confidence 467899999988765 5555555321 468999999 7653 4 6666542 479999
Q ss_pred EEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE-----eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCC
Q 020480 84 QVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ-----INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKH 158 (325)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~ 158 (325)
++.-... +..+....+ .+ ...+.. ..|...|.+++|+|++ ++++|+.||.|++||++.
T Consensus 154 d~~~~~~----------~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~- 216 (397)
T 1sq9_A 154 KFHPFAD----------ESNSLTLNW---SP-TLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST- 216 (397)
T ss_dssp EEESSSS----------HHHHTTTCC---CC-EEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT-
T ss_pred eCCcccc----------ccccceeec---cC-cceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC-
Confidence 8863100 000000000 01 111111 3588999999999987 899999999999999987
Q ss_pred CCCCCCCCCCCCcEEEec---C---CCceEEEEecCCCCCeEEEEeCC---CcEEEEeCCCCCCCCcccceEeeec----
Q 020480 159 PSKPPLDGACSPDLRLRG---H---STEGYGLSWSKFKEGHLLSGSDD---AQICLWDINAAPKNKSLEAMQIFKV---- 225 (325)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~---h---~~~v~~l~~~p~~~~~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~---- 225 (325)
..++..+.. | ...|.+++|+|++. +|++++.| |.|++||++.+ .++..+..
T Consensus 217 ---------~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~------~~~~~~~~~~~~ 280 (397)
T 1sq9_A 217 ---------LRPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFG------ERIGSLSVPTHS 280 (397)
T ss_dssp ---------TEEEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTC------CEEEEECBC---
T ss_pred ---------CceeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCC------cccceeccCccc
Confidence 355677888 8 99999999999988 89999999 99999999876 45677777
Q ss_pred ---------CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee------cc---------------CCC
Q 020480 226 ---------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV------AH---------------QSE 275 (325)
Q Consensus 226 ---------~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~------~h---------------~~~ 275 (325)
|...|.+++|+|++ .+|++++.||.|++||+++.+ .+..+. +| ..+
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 356 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKE---RITTLNMHCDDIEIEEDILAVDEHGDSLAEPG 356 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE---EEEEEECCGGGCSSGGGCCCBCTTSCBCSSCC
T ss_pred ccccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCc---eeEEEecccCcccchhhhhccccccccccCCc
Confidence 99999999999987 699999999999999999887 477777 77 999
Q ss_pred eeEEEeCCCC----------C-c-cCCCCceEEeeecc
Q 020480 276 VGVSILNASF----------R-L-SHEDTCTCTHRHSR 301 (325)
Q Consensus 276 v~~i~~~p~~----------~-~-~~~~d~~~~~~~~~ 301 (325)
|++++|+|++ . + +++.|+.+++|++.
T Consensus 357 v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 357 VFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred eeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 9999999997 3 3 88899999999875
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=2.9e-23 Score=179.86 Aligned_cols=221 Identities=13% Similarity=0.125 Sum_probs=173.8
Q ss_pred HHHHhhhHhcChhHHHHhhh---cCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 18 NEEYKIWKKNTPFLYDLVIT---HALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~---~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
+..+++|+.+.+.....+.. ....-++.+++|.|+.. .++.+.. +..+.+|++.-.
T Consensus 71 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~l~~~~~-----d~~i~~~d~~~~------ 129 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC----------TLIVGGE-----ASTLSIWDLAAP------ 129 (337)
T ss_dssp BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSS----------EEEEEES-----SSEEEEEECCCC------
T ss_pred CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCC----------EEEEEcC-----CCcEEEEECCCC------
Confidence 56789999877543322221 12345688999999764 4555553 247888876311
Q ss_pred ccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 95 DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
..........|...|.+++|+|++ +++++++.||.|++||+.. ...+..+
T Consensus 130 -------------------~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~----------~~~~~~~ 179 (337)
T 1gxr_A 130 -------------------TPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHN----------QTLVRQF 179 (337)
T ss_dssp ---------------------EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEEEE
T ss_pred -------------------CcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCC----------Cceeeee
Confidence 111223445689999999999988 7999999999999999987 3456778
Q ss_pred ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEE
Q 020480 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLI 254 (325)
Q Consensus 175 ~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~i 254 (325)
.+|...+.+++|+|++. .+++++.||.|++||++.+ ..+..+ .+...+.+++|+|++ .++++++.++.|++
T Consensus 180 ~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~------~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~ 250 (337)
T 1gxr_A 180 QGHTDGASCIDISNDGT-KLWTGGLDNTVRSWDLREG------RQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEV 250 (337)
T ss_dssp CCCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTT------EEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred ecccCceEEEEECCCCC-EEEEEecCCcEEEEECCCC------ceEeee-cCCCceEEEEECCCC-CEEEEEcCCCcEEE
Confidence 88999999999999998 8999999999999999876 334444 477889999999997 68999999999999
Q ss_pred EEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 255 WDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
||++..+ ...+..|...|.+++|+|++.+ +++.|+.+++|++..
T Consensus 251 ~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 251 LHVNKPD----KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp EETTSSC----EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EECCCCC----eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 9999876 4567889999999999999984 788899999998754
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=2.9e-24 Score=189.01 Aligned_cols=229 Identities=13% Similarity=0.081 Sum_probs=177.4
Q ss_pred hHHHHhhhHhcChh--HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKNTPF--LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~~~~--~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+.++++|+..... ....+..|.. ++.+++|.|++. .++.+.. +..+.+|++.-
T Consensus 28 ~d~~v~i~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~----------~l~~~~~-----dg~i~vwd~~~------- 83 (372)
T 1k8k_C 28 NNHEVHIYEKSGNKWVQVHELKEHNG--QVTGVDWAPDSN----------RIVTCGT-----DRNAYVWTLKG------- 83 (372)
T ss_dssp SSSEEEEEEEETTEEEEEEEEECCSS--CEEEEEEETTTT----------EEEEEET-----TSCEEEEEEET-------
T ss_pred CCCEEEEEeCCCCcEEeeeeecCCCC--cccEEEEeCCCC----------EEEEEcC-----CCeEEEEECCC-------
Confidence 45678999988765 4444445543 588999999764 4555553 24788998741
Q ss_pred ccCCCCcccCCCCCCCCCCCce-EEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCC-CCcE
Q 020480 95 DARHYDDDRSDFGGFGCANGKV-QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGAC-SPDL 172 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~-~~~~ 172 (325)
++. .......|...|.+++|+|++ .+|++|+.||.|++|++.. ... ....
T Consensus 84 -------------------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~--------~~~~~~~~ 135 (372)
T 1k8k_C 84 -------------------RTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQ--------ENDWWVCK 135 (372)
T ss_dssp -------------------TEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEET--------TTTEEEEE
T ss_pred -------------------CeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecC--------CCcceeee
Confidence 122 223345689999999999998 7999999999999999986 111 0122
Q ss_pred E-EecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCC------------CcccceEeeecCCccEEEEEeecCC
Q 020480 173 R-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN------------KSLEAMQIFKVHEGVVEDVAWHLRH 239 (325)
Q Consensus 173 ~-~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~------------~~~~~~~~~~~~~~~v~~v~~~p~~ 239 (325)
. ..+|...|.+++|+|++. +|++++.||.|++||++..... ....++..+.+|...|.+++|+|++
T Consensus 136 ~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 136 HIKKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG 214 (372)
T ss_dssp EECTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS
T ss_pred eeecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC
Confidence 2 357899999999999988 8999999999999997532100 0114567778899999999999987
Q ss_pred CcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 240 EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 240 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
.+|++++.||.|++||+++++ ++..+..|..+|.+++|+|++.+ .++.|+.+++|+++.
T Consensus 215 -~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 215 -SRVAWVSHDSTVCLADADKKM---AVATLASETLPLLAVTFITESSLVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp -SEEEEEETTTEEEEEEGGGTT---EEEEEECSSCCEEEEEEEETTEEEEEETTSSCEEEEEET
T ss_pred -CEEEEEeCCCEEEEEECCCCc---eeEEEccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccC
Confidence 699999999999999999887 48888899999999999999985 555899999999866
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1.1e-24 Score=192.44 Aligned_cols=205 Identities=15% Similarity=0.123 Sum_probs=152.8
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEE-E
Q 020480 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-Q 120 (325)
Q Consensus 42 ~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 120 (325)
-++.+++|+|++. .++.|+ .++.|.+|++.- +..+.. .
T Consensus 12 ~~v~~~~~s~~g~----------~l~~~~-----~d~~i~iw~~~~--------------------------~~~~~~~~ 50 (377)
T 3dwl_C 12 KPSYEHAFNSQRT----------EFVTTT-----ATNQVELYEQDG--------------------------NGWKHART 50 (377)
T ss_dssp SCCSCCEECSSSS----------EEECCC-----SSSCBCEEEEET--------------------------TEEEECCC
T ss_pred CcEEEEEECCCCC----------EEEEec-----CCCEEEEEEccC--------------------------CceEEEEE
Confidence 3688999999874 454443 235788888751 111111 2
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC-CCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
..+|.+.|++++|+|++ ++|++|+.||.|++||+.. +. ..+...+.+|...|.+++|+|++. +|++|+.
T Consensus 51 ~~~h~~~v~~~~~s~~~-~~l~s~s~d~~v~vwd~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~ 120 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPKS-NRIVTCSQDRNAYVYEKRP--------DGTWKQTLVLLRLNRAATFVRWSPNED-KFAVGSG 120 (377)
T ss_dssp BCCCSSCEEEEEECTTT-CCEEEEETTSSEEEC--------------CCCCEEECCCCSSCEEEEECCTTSS-CCEEEES
T ss_pred EecCCceEEEEEEeCCC-CEEEEEeCCCeEEEEEcCC--------CCceeeeeEecccCCceEEEEECCCCC-EEEEEec
Confidence 23699999999999998 7999999999999999987 22 345677789999999999999988 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC---------------C
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV---------------S 263 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~---------------~ 263 (325)
|+.|++||++..... .....+.. |...|.+++|+|++ .+|++++.|+.|++||++.... .
T Consensus 121 d~~i~iwd~~~~~~~---~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 196 (377)
T 3dwl_C 121 ARVISVCYFEQENDW---WVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFN 196 (377)
T ss_dssp SSCEEECCC-----C---CCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEE
T ss_pred CCeEEEEEECCcccc---eeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchh
Confidence 999999999876421 13556666 99999999999987 6999999999999999964321 0
Q ss_pred CCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 264 KPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 264 ~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
..+..+ +|...|.+++|+|++.+ +++.|+++++|+++.
T Consensus 197 ~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 197 TVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp EEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred hhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 123444 89999999999999985 788999999998754
No 56
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.92 E-value=1.4e-24 Score=196.08 Aligned_cols=166 Identities=10% Similarity=0.111 Sum_probs=134.5
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
..+|...|++|+|+|.++++||+|+.||.|+|||+.. +.......+.+|.+.|++|+|+|.+..+|+||+.|
T Consensus 115 ~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~--------~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D 186 (435)
T 4e54_B 115 AAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGI--------KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME 186 (435)
T ss_dssp EEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSC--------CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS
T ss_pred CCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCC--------CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC
Confidence 3568999999999997768999999999999999976 33333445668999999999999654499999999
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
|+|++||++.... ........+...+.+++|+|++ .+|++|+.||.|++||++... +..+.+|...|++++
T Consensus 187 ~~v~iwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~----~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 187 GTTRLQDFKGNIL----RVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE----LWNLRMHKKKVTHVA 257 (435)
T ss_dssp SCEEEEETTSCEE----EEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB----CCCSBCCSSCEEEEE
T ss_pred CEEEEeeccCCce----eEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce----eEEEecccceEEeee
Confidence 9999999986421 1112222334567899999987 699999999999999997643 677789999999999
Q ss_pred eCCCCC--c-cCCCCceEEeeeccee
Q 020480 281 LNASFR--L-SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 281 ~~p~~~--~-~~~~d~~~~~~~~~~~ 303 (325)
|+|++. + +++.|+++++|+++..
T Consensus 258 ~~p~~~~~~~s~s~d~~v~iwd~~~~ 283 (435)
T 4e54_B 258 LNPCCDWFLATASVDQTVKIWDLRQV 283 (435)
T ss_dssp ECTTCSSEEEEEETTSBCCEEETTTC
T ss_pred ecCCCceEEEEecCcceeeEEecccc
Confidence 999886 2 7889999999998653
No 57
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.92 E-value=7.9e-25 Score=189.36 Aligned_cols=167 Identities=16% Similarity=0.179 Sum_probs=134.3
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC--CCCeEEEEe
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~s 198 (325)
..+|.+.|++++|+|++ ++||+|+.|++|++||+.. +....+..+.+|...|.+++|++. +. +|++|+
T Consensus 9 ~~~H~~~V~~v~~s~~g-~~lasgs~D~~v~lwd~~~--------~~~~~~~~l~gH~~~V~~v~~~~~~~~~-~l~s~s 78 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYG-TRLATCSSDRSVKIFDVRN--------GGQILIADLRGHEGPVWQVAWAHPMYGN-ILASCS 78 (316)
T ss_dssp -----CCEEEEEECGGG-CEEEEEETTTEEEEEEEET--------TEEEEEEEEECCSSCEEEEEECCGGGSS-CEEEEE
T ss_pred cccccCeEEEeeEcCCC-CEEEEEeCCCeEEEEEecC--------CCcEEEEEEcCCCccEEEEEeCCCCCCC-EEEEEE
Confidence 34799999999999998 7999999999999999976 222345678899999999999863 55 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-CcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCee
Q 020480 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVG 277 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 277 (325)
.|++|++||++.+.. .....+.+|...|.+++|+|++ ..+|++|+.|++|++||++..........+.+|...|.
T Consensus 79 ~D~~v~iWd~~~~~~----~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 79 YDRKVIIWREENGTW----EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCN 154 (316)
T ss_dssp TTSCEEEECCSSSCC----CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBC
T ss_pred CCCEEEEEECCCCcc----eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcc
Confidence 999999999987532 3456678899999999999973 36899999999999999987642112344568999999
Q ss_pred EEEeCCCC-----------------C--ccCCCCceEEeeecc
Q 020480 278 VSILNASF-----------------R--LSHEDTCTCTHRHSR 301 (325)
Q Consensus 278 ~i~~~p~~-----------------~--~~~~~d~~~~~~~~~ 301 (325)
+++|+|++ . ++++.|+++++|+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~ 197 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEE 197 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEEC
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeC
Confidence 99999972 3 388999999999875
No 58
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=2.8e-24 Score=192.57 Aligned_cols=223 Identities=11% Similarity=0.170 Sum_probs=168.7
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+..+++|+.+...+...+..|.. ++.+++|+|++. .++.|+. +..+.+|++.-.
T Consensus 117 ~dg~i~iwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~----------~l~s~s~-----d~~i~iwd~~~~-------- 171 (420)
T 3vl1_A 117 TEGDIKVLDSNFNLQREIDQAHVS--EITKLKFFPSGE----------ALISSSQ-----DMQLKIWSVKDG-------- 171 (420)
T ss_dssp TTSCEEEECTTSCEEEEETTSSSS--CEEEEEECTTSS----------EEEEEET-----TSEEEEEETTTC--------
T ss_pred CCCCEEEEeCCCcceeeecccccC--ccEEEEECCCCC----------EEEEEeC-----CCeEEEEeCCCC--------
Confidence 456899999988777666656654 489999999864 4555554 347888865310
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
..+. ...+|.+.|.+++|+|++ .+|++|+.||.|++||+.. ...+..+..
T Consensus 172 -----------------~~~~--~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~ 221 (420)
T 3vl1_A 172 -----------------SNPR--TLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGT----------GTTIHTFNR 221 (420)
T ss_dssp -----------------CCCE--EEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTT----------TEEEEEECB
T ss_pred -----------------cCce--EEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCC----------CceeEEeec
Confidence 0111 235799999999999988 7999999999999999986 233444443
Q ss_pred ---C---------------------CCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEE
Q 020480 177 ---H---------------------STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232 (325)
Q Consensus 177 ---h---------------------~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 232 (325)
| ...+.+++|+|++. ++++|+.||.|++||++.+.. .......|...|.+
T Consensus 222 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~~~-----~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 222 KENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGK-YVIAGHVSGVITVHNVFSKEQ-----TIQLPSKFTCSCNS 295 (420)
T ss_dssp TTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTE-EEEEEETTSCEEEEETTTCCE-----EEEECCTTSSCEEE
T ss_pred CCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCC-EEEEEcCCCeEEEEECCCCce-----eEEcccccCCCcee
Confidence 2 34555666788888 899999999999999987632 23333568889999
Q ss_pred EEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-cCCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 233 VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 233 v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
++|+|++..+|++|+.||.|++||+++.+. ++..+.. |...|.++.|.+...+ +++.|+++++|++..
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~l~s~~~d~~v~iw~~~~ 365 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPEC--PVGEFLINEGTPINNVYFAAGALFVSSGFDTSIKLDIISD 365 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTS--CSEEEEESTTSCEEEEEEETTEEEEEETTTEEEEEEEECC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcC--chhhhhccCCCCceEEEeCCCCEEEEecCCccEEEEeccC
Confidence 999999855999999999999999998764 5677766 6778888876644333 889999999999754
No 59
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=6.6e-25 Score=196.18 Aligned_cols=236 Identities=13% Similarity=0.170 Sum_probs=176.1
Q ss_pred hHHHHhhhHhcC----hhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCC
Q 020480 17 INEEYKIWKKNT----PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 17 ~~~~~~iw~~~~----~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~ 92 (325)
.+..+++|+.+. ......+..|.. ++.+++|.|+... .++.++. +..|.+|++.-. ..
T Consensus 87 ~dg~v~vw~~~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~---------~l~s~~~-----dg~v~iwd~~~~--~~ 148 (416)
T 2pm9_A 87 DNGSLELYSTNEANNAINSMARFSNHSS--SVKTVKFNAKQDN---------VLASGGN-----NGEIFIWDMNKC--TE 148 (416)
T ss_dssp SSSCEEEECCSSTTSCCCEEEECCCSSS--CCCEEEECSSSTT---------BEEEECS-----SSCEEBCBTTTT--SS
T ss_pred cCCeEEEeecccccccccchhhccCCcc--ceEEEEEcCCCCC---------EEEEEcC-----CCeEEEEECCCC--cc
Confidence 456889999887 223334444543 5889999997321 3555543 246777755311 00
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL 172 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~ 172 (325)
.... + ..+.......|...|.+++|+|++..+|++|+.||.|++||+.. ...+.
T Consensus 149 --~~~~-------~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~----------~~~~~ 202 (416)
T 2pm9_A 149 --SPSN-------Y-------TPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKA----------KKEVI 202 (416)
T ss_dssp --CTTT-------C-------CCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTT----------TEEEE
T ss_pred --cccc-------c-------cccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCC----------CCcce
Confidence 0000 0 01111122468899999999999558999999999999999987 33455
Q ss_pred EEecC------CCceEEEEecCCCCCeEEEEeCCC---cEEEEeCCCCCCCCcccceEeee-cCCccEEEEEeecCCCcE
Q 020480 173 RLRGH------STEGYGLSWSKFKEGHLLSGSDDA---QICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYL 242 (325)
Q Consensus 173 ~~~~h------~~~v~~l~~~p~~~~~l~s~s~dg---~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~ 242 (325)
.+..| ...+.+++|+|++..++++++.|+ .|++||++.... ++..+. +|...|.+++|+|.+..+
T Consensus 203 ~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~-----~~~~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 203 HLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANT-----PLQTLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp EECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTS-----CSBCCCSCCSSCEEEEEECSSCSSC
T ss_pred EEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCC-----CcEEeecCccCceeEEEeCCCCCCe
Confidence 56555 789999999999866899999999 999999997632 355566 899999999999933479
Q ss_pred EEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCC-Cc--cCCCCceEEeeecceee
Q 020480 243 FGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASF-RL--SHEDTCTCTHRHSRYLL 304 (325)
Q Consensus 243 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~-~~--~~~~d~~~~~~~~~~~~ 304 (325)
|++++.||.|++||+++++ ++..+..|...|.+++|+|++ .+ +++.|+.+++|++....
T Consensus 278 l~s~~~dg~v~~wd~~~~~---~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 278 LLSSGRDNTVLLWNPESAE---QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLT 339 (416)
T ss_dssp EEEEESSSEEEEECSSSCC---EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCC
T ss_pred EEEEeCCCCEEEeeCCCCc---cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCC
Confidence 9999999999999999987 488889999999999999998 43 88999999999986544
No 60
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.92 E-value=1.2e-23 Score=180.98 Aligned_cols=254 Identities=15% Similarity=0.193 Sum_probs=179.1
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCC-----C
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD-----D 91 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~-----~ 91 (325)
.|.+||||+.++..+...+..+...-++.+++|.|++. .++.|+.. ..+.+|++.-... .
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~----------~l~sgs~D-----g~v~iw~~~~~~~~~~~~~ 107 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGN----------YLAVGTSS-----AEVQLWDVQQQKRLRNMTS 107 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSS----------EEEEEETT-----SEEEEEETTTTEEEEEEEC
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCC----------EEEEEECC-----CcEEEeecCCceeEEEecC
Confidence 46889999999887776666555566789999999875 45555432 2555554321000 0
Q ss_pred CCcccCC---------CCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCC
Q 020480 92 SENDARH---------YDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKP 162 (325)
Q Consensus 92 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~ 162 (325)
....... .....+....+.............+|...+..+.+.+.+ .++++++.||.|++||+....
T Consensus 108 h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~--- 183 (318)
T 4ggc_A 108 HSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGE--- 183 (318)
T ss_dssp CSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBT---
T ss_pred ccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCc---
Confidence 0000000 000011111122223334444567899999999999998 799999999999999998621
Q ss_pred CCCCCCCCcEEEecCCCceEEEEecCCCCCeE--EEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC
Q 020480 163 PLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL--LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240 (325)
Q Consensus 163 ~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l--~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 240 (325)
...........|.+.|..+.++|.+...+ ++++.++.|++||.+... ......+...+..+.|+|.+.
T Consensus 184 ---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~ 253 (318)
T 4ggc_A 184 ---GGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGA-------CLSAVDAHSQVCSILWSPHYK 253 (318)
T ss_dssp ---TBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCC-------EEEEEECSSCEEEEEEETTTT
T ss_pred ---ccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccc-------ccccccceeeeeeeeeccccc
Confidence 12234556678889999999999887655 356788999999998752 233445777899999999875
Q ss_pred cEEEE-EecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 241 YLFGS-VGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 241 ~~l~s-~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.++++ |+.|+.|++||+++++ ++..+.+|.+.|++++|+|+|.+ +++.|+++++|++..
T Consensus 254 ~~~~~sg~~d~~i~iwd~~~~~---~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 254 ELISGHGFAQNQLVIWKYPTMA---KVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEEECTTTCCEEEEETTTCC---EEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred ceEEEEEcCCCEEEEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 44432 3479999999999988 48999999999999999999985 899999999998753
No 61
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=6.3e-24 Score=189.62 Aligned_cols=229 Identities=14% Similarity=0.195 Sum_probs=172.4
Q ss_pred hHHHHhhhHhcCh----hHHHHhhhcCCCCCceEEEEee-CCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCC
Q 020480 17 INEEYKIWKKNTP----FLYDLVITHALEWPSLTVEWLP-DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDD 91 (325)
Q Consensus 17 ~~~~~~iw~~~~~----~~y~~~~~~~~~~p~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~ 91 (325)
.+..++||+.+.. ..+..+..|. -++.+++|.| +.. .++.|+. +..|.+|++.-. .
T Consensus 55 ~~g~i~v~~~~~~~~~~~~~~~~~~h~--~~V~~~~~~p~~~~----------~l~s~s~-----dg~v~vw~~~~~--~ 115 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVDKNVPLVCGHT--APVLDIAWCPHNDN----------VIASGSE-----DCTVMVWEIPDG--G 115 (402)
T ss_dssp SSCCEEEEETTCCEECCTTCCCBCCCS--SCEEEEEECTTCTT----------EEEEEET-----TSEEEEEECCTT--C
T ss_pred CCCEEEEEECccCCCCCCCCceEecCC--CCEEEEEeCCCCCC----------EEEEEeC-----CCeEEEEEccCC--C
Confidence 4567899987543 2233344454 3599999999 543 4656653 347899977411 0
Q ss_pred CCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 92 SENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
.... ....+ ....+|...|.+++|+|++.++|++|+.||.|++||+.. ...+
T Consensus 116 ~~~~----------------~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~----------~~~~ 167 (402)
T 2aq5_A 116 LVLP----------------LREPV--ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT----------GAAV 167 (402)
T ss_dssp CSSC----------------BCSCS--EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT----------TEEE
T ss_pred Cccc----------------cCCce--EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC----------CCcc
Confidence 0000 00111 234579999999999999867999999999999999987 3446
Q ss_pred EEE--ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEee-ecCCcc-EEEEEeecCCCcEEEEE-
Q 020480 172 LRL--RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF-KVHEGV-VEDVAWHLRHEYLFGSV- 246 (325)
Q Consensus 172 ~~~--~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~-v~~v~~~p~~~~~l~s~- 246 (325)
..+ .+|...|.+++|+|++. +|++++.||.|++||++.+ ..+..+ .+|... +.+++|+|++ .++++|
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~ 239 (402)
T 2aq5_A 168 LTLGPDVHPDTIYSVDWSRDGA-LICTSCRDKRVRVIEPRKG------TVVAEKDRPHEGTRPVHAVFVSEG-KILTTGF 239 (402)
T ss_dssp EEECTTTCCSCEEEEEECTTSS-CEEEEETTSEEEEEETTTT------EEEEEEECSSCSSSCCEEEECSTT-EEEEEEE
T ss_pred EEEecCCCCCceEEEEECCCCC-EEEEEecCCcEEEEeCCCC------ceeeeeccCCCCCcceEEEEcCCC-cEEEEec
Confidence 677 78999999999999988 8999999999999999986 456666 677765 8999999986 688888
Q ss_pred --ecCCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeCCCCCc---cCCCCceEEeeecce
Q 020480 247 --GDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILNASFRL---SHEDTCTCTHRHSRY 302 (325)
Q Consensus 247 --~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~~ 302 (325)
+.|+.|++||+++... ++... ..|...+.+++|+|++.+ +++.|+.+++|++..
T Consensus 240 ~~~~d~~i~iwd~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~ 299 (402)
T 2aq5_A 240 SRMSERQVALWDTKHLEE--PLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITS 299 (402)
T ss_dssp CTTCCEEEEEEETTBCSS--CSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECS
T ss_pred cCCCCceEEEEcCccccC--CceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecC
Confidence 7999999999998764 34333 357788999999999884 466799999998754
No 62
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=1.1e-23 Score=185.25 Aligned_cols=239 Identities=11% Similarity=0.107 Sum_probs=173.7
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...+...+.......++.+++|.|+.. .++.++. ++.+.+|++...
T Consensus 72 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----------~l~~~~~-----d~~v~i~d~~~~-------- 128 (372)
T 1k8k_C 72 TDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEK----------KFAVGSG-----SRVISICYFEQE-------- 128 (372)
T ss_dssp TTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSS----------EEEEEET-----TSSEEEEEEETT--------
T ss_pred CCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCC----------EEEEEeC-----CCEEEEEEecCC--------
Confidence 45679999987765333333333445689999999764 5666654 247889988622
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCC--------CCCC
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPL--------DGAC 168 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~--------~~~~ 168 (325)
............|...|.+++|+|++ .+|++|+.||.|++||+......... ....
T Consensus 129 ---------------~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~ 192 (372)
T 1k8k_C 129 ---------------NDWWVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFG 192 (372)
T ss_dssp ---------------TTEEEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTT
T ss_pred ---------------CcceeeeeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEcccccccccccccccccccchh
Confidence 00011112224589999999999988 79999999999999997531110000 0123
Q ss_pred CCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec
Q 020480 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~ 248 (325)
..+..+.+|...|.+++|+|++. +|++++.||.|++||++.+ .++..+..|...|.+++|+|++ .++++| .
T Consensus 193 ~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~ 263 (372)
T 1k8k_C 193 ELMFESSSSCGWVHGVCFSANGS-RVAWVSHDSTVCLADADKK------MAVATLASETLPLLAVTFITES-SLVAAG-H 263 (372)
T ss_dssp CEEEECCCCSSCEEEEEECSSSS-EEEEEETTTEEEEEEGGGT------TEEEEEECSSCCEEEEEEEETT-EEEEEE-T
T ss_pred hheEecCCCCCeEEEEEECCCCC-EEEEEeCCCEEEEEECCCC------ceeEEEccCCCCeEEEEEecCC-CEEEEE-e
Confidence 44566778999999999999998 8999999999999999877 4677888999999999999987 577666 9
Q ss_pred CCcEEEEEccC--CC-----------------------------CCCCe------eEe-eccCCCeeEEEeC-CCC---C
Q 020480 249 DQYLLIWDLRT--PS-----------------------------VSKPV------QSV-VAHQSEVGVSILN-ASF---R 286 (325)
Q Consensus 249 dg~i~iwd~~~--~~-----------------------------~~~~~------~~~-~~h~~~v~~i~~~-p~~---~ 286 (325)
|+.|++|+++. +. ..... ..+ .+|..+|++++|+ ++| .
T Consensus 264 d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~ 343 (372)
T 1k8k_C 264 DCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS 343 (372)
T ss_dssp TSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS
T ss_pred CCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee
Confidence 99999999988 31 00000 223 4899999999976 565 4
Q ss_pred --ccCCCCceEEeeeccee
Q 020480 287 --LSHEDTCTCTHRHSRYL 303 (325)
Q Consensus 287 --~~~~~d~~~~~~~~~~~ 303 (325)
++++.|+++++|+++..
T Consensus 344 ~l~s~~~Dg~i~~W~~~~~ 362 (372)
T 1k8k_C 344 QFCTTGMDGGMSIWDVRSL 362 (372)
T ss_dssp EEEEEETTSEEEEEEHHHH
T ss_pred eEEEecCCCceEEEEecCh
Confidence 38999999999998653
No 63
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=2.1e-24 Score=189.26 Aligned_cols=234 Identities=12% Similarity=0.208 Sum_probs=173.3
Q ss_pred HHHHhhhHhcChhHHHHhhhcC---CCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 18 NEEYKIWKKNTPFLYDLVITHA---LEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~~~---~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
+.++++|+.........+..+. ..-++.+++|.|+.... ...++.|... +.|.+|++.
T Consensus 43 ~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~------~~~l~~~~~d-----g~i~v~d~~-------- 103 (366)
T 3k26_A 43 SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTS------HPLLAVAGSR-----GIIRIINPI-------- 103 (366)
T ss_dssp TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTC------CEEEEEEETT-----CEEEEECTT--------
T ss_pred CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCC------CCEEEEecCC-----CEEEEEEch--------
Confidence 4479999988766554554443 23468999999985421 1356666542 378887542
Q ss_pred ccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 95 DARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
.++. ......|...|.+++|+|.+..+|++|+.||.|++||+.. ...+..+
T Consensus 104 ------------------~~~~-~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~----------~~~~~~~ 154 (366)
T 3k26_A 104 ------------------TMQC-IKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT----------DTLVAIF 154 (366)
T ss_dssp ------------------TCCE-EEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT----------TEEEEEE
T ss_pred ------------------hceE-eeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec----------CeEEEEe
Confidence 1122 2223469999999999994337999999999999999987 3345555
Q ss_pred ---ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCC-------------------------------------
Q 020480 175 ---RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKN------------------------------------- 214 (325)
Q Consensus 175 ---~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~------------------------------------- 214 (325)
.+|...|.+++|+|++. +|++++.||.|++||++.+...
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 68999999999999988 8999999999999998753110
Q ss_pred -----------------C----------------------cccceEeeecCCccEEEEEeecC--CCcEEEEEecCCcEE
Q 020480 215 -----------------K----------------------SLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLL 253 (325)
Q Consensus 215 -----------------~----------------------~~~~~~~~~~~~~~v~~v~~~p~--~~~~l~s~~~dg~i~ 253 (325)
. ....+..+..|...|.+++|+|+ + .+|++|+.||.|+
T Consensus 234 v~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~ 312 (366)
T 3k26_A 234 VDCVRWLGDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLY 312 (366)
T ss_dssp CCEEEEETTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEE
T ss_pred EEEEEEcCCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEE
Confidence 0 00124455667778899999998 6 6999999999999
Q ss_pred EEEccCCCCCC-CeeEeecc--CCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 254 IWDLRTPSVSK-PVQSVVAH--QSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 254 iwd~~~~~~~~-~~~~~~~h--~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+||+++++... ....+..| ...|++++|+|++.+ +++.|+.+++|++.
T Consensus 313 vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 313 VWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp EEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred EEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 99999876321 23456666 789999999999985 88999999999864
No 64
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=1.1e-23 Score=188.08 Aligned_cols=168 Identities=18% Similarity=0.272 Sum_probs=142.1
Q ss_pred eccCCCeeEEEecC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 122 INHDGEVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 122 ~~h~~~v~~v~~~~-~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
.+|.+.|++++|+| ++ .+|++|+.||.|++|++....... ....++..+.+|...|.+++|+|++..+|++|+.|
T Consensus 78 ~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~~~~~~~~---~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 153 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEIPDGGLVL---PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD 153 (402)
T ss_dssp CCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEECCTTCCSS---CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT
T ss_pred ecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEccCCCCcc---ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC
Confidence 47999999999999 55 799999999999999998721100 01156788999999999999999985599999999
Q ss_pred CcEEEEeCCCCCCCCcccceEee--ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccCCC-e
Q 020480 201 AQICLWDINAAPKNKSLEAMQIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSE-V 276 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~-v 276 (325)
|.|++||++.+ ..+..+ ..|...|.+++|+|++ .+|++++.||.|++||+++++. +..+ ..|.+. +
T Consensus 154 g~i~iwd~~~~------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~ 223 (402)
T 2aq5_A 154 NVILVWDVGTG------AAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTV---VAEKDRPHEGTRP 223 (402)
T ss_dssp SCEEEEETTTT------EEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEE---EEEEECSSCSSSC
T ss_pred CEEEEEECCCC------CccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCce---eeeeccCCCCCcc
Confidence 99999999976 456677 7899999999999987 6899999999999999999873 6776 678776 8
Q ss_pred eEEEeCCCCCc--cC---CCCceEEeeeccee
Q 020480 277 GVSILNASFRL--SH---EDTCTCTHRHSRYL 303 (325)
Q Consensus 277 ~~i~~~p~~~~--~~---~~d~~~~~~~~~~~ 303 (325)
.+++|+|++.+ ++ +.++.+++|+++..
T Consensus 224 ~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~ 255 (402)
T 2aq5_A 224 VHAVFVSEGKILTTGFSRMSERQVALWDTKHL 255 (402)
T ss_dssp CEEEECSTTEEEEEEECTTCCEEEEEEETTBC
T ss_pred eEEEEcCCCcEEEEeccCCCCceEEEEcCccc
Confidence 99999999986 44 68999999998653
No 65
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.92 E-value=7.3e-23 Score=182.06 Aligned_cols=230 Identities=14% Similarity=0.192 Sum_probs=177.5
Q ss_pred hhhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEee-CCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCC
Q 020480 15 RLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLP-DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSE 93 (325)
Q Consensus 15 ~~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~ 93 (325)
...+..+++|..........+..|... +.+++|+| ++. .++.|+. ++.|.+|++.-..
T Consensus 19 ~~~~~~~~v~~~~~~~~~~~~~~h~~~--v~~~~~s~~~~~----------~l~~~~~-----dg~i~iw~~~~~~---- 77 (408)
T 4a11_B 19 RRAESTRRVLGLELNKDRDVERIHGGG--INTLDIEPVEGR----------YMLSGGS-----DGVIVLYDLENSS---- 77 (408)
T ss_dssp HHHHHHHHHHTEEECTTEEECCCCSSC--EEEEEECTTTCC----------EEEEEET-----TSCEEEEECCCCS----
T ss_pred eeccCcceeeccccCcceeeeeccCCc--EEEEEEecCCCC----------EEEEEcC-----CCeEEEEECCCCc----
Confidence 346778999999887777777777654 89999999 653 5666654 2478898774210
Q ss_pred cccCCCCcccCCCCCCCCCCCceEE--EEE------eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCC
Q 020480 94 NDARHYDDDRSDFGGFGCANGKVQI--IQQ------INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLD 165 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~------~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~ 165 (325)
....+.. ... ..|.+.|.+++|+|++..+|++|+.||.|++||+..
T Consensus 78 ------------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-------- 131 (408)
T 4a11_B 78 ------------------RQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNT-------- 131 (408)
T ss_dssp ------------------SSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTT--------
T ss_pred ------------------ccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCC--------
Confidence 0011111 111 148999999999996557999999999999999987
Q ss_pred CCCCCcEEEecCCCceEEEEecCCCCC--eEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEE
Q 020480 166 GACSPDLRLRGHSTEGYGLSWSKFKEG--HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLF 243 (325)
Q Consensus 166 ~~~~~~~~~~~h~~~v~~l~~~p~~~~--~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 243 (325)
......+ .+...+.++.|+|.+.. ++++++.||.|++||++.+ ..+..+..|...|.+++|+|++..++
T Consensus 132 --~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~------~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 132 --LQTADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG------SCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp --TEEEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS------CCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred --Cccceec-cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc------ceeeeecCCCCcEEEEEECCCCCcEE
Confidence 2333344 37788999999985432 8999999999999999876 34677888999999999999986689
Q ss_pred EEEecCCcEEEEEccCCCCCCCeeEe---------------eccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 244 GSVGDDQYLLIWDLRTPSVSKPVQSV---------------VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 244 ~s~~~dg~i~iwd~~~~~~~~~~~~~---------------~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++|+.||.|++||++.... ++..+ ..|...|.+++|+|++.+ +++.|+.+++|+++.
T Consensus 203 ~~~~~dg~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~ 276 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASG--CLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSN 276 (408)
T ss_dssp EEEETTSCEEEEETTCSSC--CSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred EEEcCCCcEEEEECCCCCc--ccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCC
Confidence 9999999999999987653 23333 578899999999999974 788999999999765
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.5e-23 Score=187.27 Aligned_cols=221 Identities=16% Similarity=0.225 Sum_probs=172.2
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+..+++|+.+.......+..|.. ++.+++|.+. .++.|+.. ..+.+|++..
T Consensus 154 ~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~------------~l~~~~~d-----g~i~i~d~~~--------- 205 (401)
T 4aez_A 154 GNGLVDIYDVESQTKLRTMAGHQA--RVGCLSWNRH------------VLSSGSRS-----GAIHHHDVRI--------- 205 (401)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSS--CEEEEEEETT------------EEEEEETT-----SEEEEEETTS---------
T ss_pred CCCeEEEEECcCCeEEEEecCCCC--ceEEEEECCC------------EEEEEcCC-----CCEEEEeccc---------
Confidence 456889999887766655555554 4778888432 45555542 4788886531
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
..........|.+.|.+++|+|++ .+|++|+.||.|++||+.. ..+...+.+
T Consensus 206 -----------------~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~----------~~~~~~~~~ 257 (401)
T 4aez_A 206 -----------------ANHQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARS----------SIPKFTKTN 257 (401)
T ss_dssp -----------------SSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTC----------SSEEEEECC
T ss_pred -----------------CcceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCC----------CCccEEecC
Confidence 112233456799999999999988 7999999999999999987 455677889
Q ss_pred CCCceEEEEecCCCCCeEEEEe--CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEE--EecCCcE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGS--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGS--VGDDQYL 252 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s--~~~dg~i 252 (325)
|...|.+++|+|++..++++|+ .|+.|++||++.+ .++..+. +...|.+++|+|++ ..+++ |+.||.|
T Consensus 258 ~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~------~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i 329 (401)
T 4aez_A 258 HNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG------ARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNL 329 (401)
T ss_dssp CSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECTTTCEE
T ss_pred CcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC------CEEEEEe-CCCcEEEEEECCCC-CeEEEEeecCCCcE
Confidence 9999999999998887888876 7999999999976 3455554 66789999999997 56666 4489999
Q ss_pred EEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 253 ~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++||+++... .....+.+|...|.+++|+|+|.+ +++.|+.+++|++..
T Consensus 330 ~v~~~~~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~ 380 (401)
T 4aez_A 330 SIWSYSSSGL-TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYD 380 (401)
T ss_dssp EEEEEETTEE-EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC
T ss_pred EEEecCCccc-eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 9999998652 123446789999999999999984 889999999998754
No 67
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.2e-23 Score=200.70 Aligned_cols=221 Identities=16% Similarity=0.162 Sum_probs=171.0
Q ss_pred hhhHHHHhhhHhcChh-----HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCC
Q 020480 15 RLINEEYKIWKKNTPF-----LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPL 89 (325)
Q Consensus 15 ~~~~~~~~iw~~~~~~-----~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~ 89 (325)
...|.++|+|+.+... ....+..|.. ++.+++|+|++. .++.|+. +..|.+|++.
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~--~v~~v~~s~~g~----------~l~sgs~-----Dg~v~vwd~~--- 460 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSH--FVEDVVLSSDGQ----------FALSGSW-----DGELRLWDLA--- 460 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSS--CEEEEEECTTSS----------EEEEEET-----TSEEEEEETT---
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCC--cEEEEEECCCCC----------EEEEEeC-----CCcEEEEECC---
Confidence 3467889999876532 1223444543 488999999874 4656654 3478888752
Q ss_pred CCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCC
Q 020480 90 DDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS 169 (325)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~ 169 (325)
.+ .......+|.+.|.+++|+|++ .+|++|+.|++|++||... .
T Consensus 461 -----------------------~~-~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~-----------~ 504 (694)
T 3dm0_A 461 -----------------------AG-VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLG-----------E 504 (694)
T ss_dssp -----------------------TT-EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTS-----------C
T ss_pred -----------------------CC-cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCC-----------C
Confidence 11 1223456899999999999998 7999999999999999865 1
Q ss_pred CcEEE----ecCCCceEEEEecCCCC-CeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEE
Q 020480 170 PDLRL----RGHSTEGYGLSWSKFKE-GHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244 (325)
Q Consensus 170 ~~~~~----~~h~~~v~~l~~~p~~~-~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~ 244 (325)
....+ .+|...|.+++|+|++. ..+++|+.|+.|++||++.. .+...+.+|...|++++|+|++ .+|+
T Consensus 505 ~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~------~~~~~~~~h~~~v~~v~~spdg-~~l~ 577 (694)
T 3dm0_A 505 CKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC------KLRSTLAGHTGYVSTVAVSPDG-SLCA 577 (694)
T ss_dssp EEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC------CEEEEECCCSSCEEEEEECTTS-SEEE
T ss_pred cceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC------cEEEEEcCCCCCEEEEEEeCCC-CEEE
Confidence 11122 36889999999999863 37999999999999999876 4577888999999999999987 6999
Q ss_pred EEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 245 SVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 245 s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
+|+.||+|++||+++++. +..+. +...|.+++|+|++.+ .++.+..+++|+++.
T Consensus 578 sg~~Dg~i~iwd~~~~~~---~~~~~-~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~ 632 (694)
T 3dm0_A 578 SGGKDGVVLLWDLAEGKK---LYSLE-ANSVIHALCFSPNRYWLCAATEHGIKIWDLES 632 (694)
T ss_dssp EEETTSBCEEEETTTTEE---EECCB-CSSCEEEEEECSSSSEEEEEETTEEEEEETTT
T ss_pred EEeCCCeEEEEECCCCce---EEEec-CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCC
Confidence 999999999999998873 55554 4568999999999985 566778899998753
No 68
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=4.7e-23 Score=184.02 Aligned_cols=220 Identities=20% Similarity=0.263 Sum_probs=174.9
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...+...+... ..-++.+++|+|++. .+++|+.. ..+.+|++.
T Consensus 111 ~d~~v~lw~~~~~~~~~~~~~~-~~~~v~~v~~s~~~~----------~l~~~~~d-----g~i~iwd~~---------- 164 (401)
T 4aez_A 111 LERNVYVWNADSGSVSALAETD-ESTYVASVKWSHDGS----------FLSVGLGN-----GLVDIYDVE---------- 164 (401)
T ss_dssp ETTEEEEEETTTCCEEEEEECC-TTCCEEEEEECTTSS----------EEEEEETT-----SCEEEEETT----------
T ss_pred CCCeEEEeeCCCCcEeEeeecC-CCCCEEEEEECCCCC----------EEEEECCC-----CeEEEEECc----------
Confidence 5678999999887655443332 344689999999764 56666643 368888652
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.++ .......|...|.+++|++ +++++|+.||.|++||++. .......+.+
T Consensus 165 ----------------~~~-~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~---------~~~~~~~~~~ 215 (401)
T 4aez_A 165 ----------------SQT-KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRI---------ANHQIGTLQG 215 (401)
T ss_dssp ----------------TCC-EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTS---------SSCEEEEEEC
T ss_pred ----------------CCe-EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEeccc---------CcceeeEEcC
Confidence 111 1223447999999999954 6899999999999999984 1344677889
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe--cCCcEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG--DDQYLLI 254 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~--~dg~i~i 254 (325)
|...|.+++|+|++. +|++|+.||.|++||++.+ .++..+..|...|.+++|+|++..++++|+ .|+.|++
T Consensus 216 ~~~~v~~~~~~~~~~-~l~s~~~d~~v~iwd~~~~------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i 288 (401)
T 4aez_A 216 HSSEVCGLAWRSDGL-QLASGGNDNVVQIWDARSS------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHF 288 (401)
T ss_dssp CSSCEEEEEECTTSS-EEEEEETTSCEEEEETTCS------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEE
T ss_pred CCCCeeEEEEcCCCC-EEEEEeCCCeEEEccCCCC------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEE
Confidence 999999999999988 8999999999999999976 457778889999999999998888998876 7999999
Q ss_pred EEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--c--CCCCceEEeeecce
Q 020480 255 WDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--S--HEDTCTCTHRHSRY 302 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~--~~~d~~~~~~~~~~ 302 (325)
||+++++. +..+. +...|.+++|+|++.. + |+.|+.+++|++..
T Consensus 289 ~d~~~~~~---~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 289 WNAATGAR---VNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EETTTCCE---EEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EECCCCCE---EEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 99998873 66654 6788999999999985 3 55899999998764
No 69
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.7e-24 Score=188.04 Aligned_cols=163 Identities=13% Similarity=0.058 Sum_probs=125.2
Q ss_pred EEEeccCCCeeEEEecC--CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEE
Q 020480 119 IQQINHDGEVNRARYMP--QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLL 195 (325)
Q Consensus 119 ~~~~~h~~~v~~v~~~~--~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~ 195 (325)
.....|.+.|.+++|+| ++ .++++|+.||.|++||+.. + ....... .|...+.+++|+|++. +|+
T Consensus 119 ~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~--------~--~~~~~~~~~~~~~i~~~~~~pdg~-~la 186 (343)
T 3lrv_A 119 EIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYED--------D--SQYIVHSAKSDVEYSSGVLHKDSL-LLA 186 (343)
T ss_dssp EEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSS--------S--CEEEEECCCSSCCCCEEEECTTSC-EEE
T ss_pred EeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCC--------C--cEEEEEecCCCCceEEEEECCCCC-EEE
Confidence 34457889999999999 88 7999999999999999987 2 2233342 4556899999999998 899
Q ss_pred EEeCCCcEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 196 SGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 196 s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
+|+.||.|++||++.+.. ....+.. |...|.+++|+|++ .+|++++ |+.|++||+++.+....+..+..|..
T Consensus 187 sg~~dg~i~iwd~~~~~~-----~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPDQ-----ASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp EECTTSCEEEEESSCTTS-----CCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSSTTCBSSCCCBC---
T ss_pred EEcCCCEEEEEECCCCCC-----CccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCCcceeecccccccc
Confidence 999999999999998743 1155676 99999999999987 6888888 55999999999875323333333445
Q ss_pred Cee--EEEeCCCCCc--cCCC-CceEEeeec
Q 020480 275 EVG--VSILNASFRL--SHED-TCTCTHRHS 300 (325)
Q Consensus 275 ~v~--~i~~~p~~~~--~~~~-d~~~~~~~~ 300 (325)
.+. +++|+|+|++ +++. ++.+++|++
T Consensus 260 ~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 260 KTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp --CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 554 6999999996 4345 899999976
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=5.1e-23 Score=183.04 Aligned_cols=234 Identities=18% Similarity=0.268 Sum_probs=175.4
Q ss_pred hHHHHhhhHhcChhHHHHhhh-----------cCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEE
Q 020480 17 INEEYKIWKKNTPFLYDLVIT-----------HALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQV 85 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~-----------~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~ 85 (325)
.+..+++|+......-..+.. .....++.+++|.|+... .++.++. ++.+.+|++
T Consensus 64 ~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~---------~l~s~~~-----d~~i~iwd~ 129 (408)
T 4a11_B 64 SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTG---------MFTSSSF-----DKTLKVWDT 129 (408)
T ss_dssp TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTT---------CEEEEET-----TSEEEEEET
T ss_pred CCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCc---------EEEEEeC-----CCeEEEeeC
Confidence 467799999887654433321 113446899999995432 3555543 347888865
Q ss_pred ECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCC--cEEEEEecCCeEEEEeCCCCCCCCC
Q 020480 86 QLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNP--FLIATKTVSAEVYVFDYSKHPSKPP 163 (325)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~--~~la~g~~dg~v~vwd~~~~~~~~~ 163 (325)
. . .+....+.+...+.++.|++.+. .++++|+.+|.|++||+..
T Consensus 130 ~--------------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~------ 175 (408)
T 4a11_B 130 N--------------------------T--LQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS------ 175 (408)
T ss_dssp T--------------------------T--TEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS------
T ss_pred C--------------------------C--CccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC------
Confidence 2 1 12334566889999999999642 4899999999999999987
Q ss_pred CCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCC----------cccceEeeecCCccEEEE
Q 020480 164 LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK----------SLEAMQIFKVHEGVVEDV 233 (325)
Q Consensus 164 ~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~----------~~~~~~~~~~~~~~v~~v 233 (325)
...+..+.+|...|.+++|+|++..++++|+.||.|++||++...... ..........|...|.++
T Consensus 176 ----~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 251 (408)
T 4a11_B 176 ----GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGL 251 (408)
T ss_dssp ----SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEE
T ss_pred ----cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEE
Confidence 355778889999999999999998669999999999999998764210 001112235788999999
Q ss_pred EeecCCCcEEEEEecCCcEEEEEccCCCCC--------------------------------------------CCeeEe
Q 020480 234 AWHLRHEYLFGSVGDDQYLLIWDLRTPSVS--------------------------------------------KPVQSV 269 (325)
Q Consensus 234 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--------------------------------------------~~~~~~ 269 (325)
+|+|++ .+|++++.||.|++||+++++.. .++..+
T Consensus 252 ~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 252 CFTSDG-LHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp EECTTS-SEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred EEcCCC-CEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 999987 69999999999999999875421 234556
Q ss_pred eccCCCeeEEEeCCCCCc--cCCCCceEEeeeccee
Q 020480 270 VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~~ 303 (325)
.+|...|++++|+|++.+ +++.|+.+++|++...
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~ 366 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLY 366 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCC
Confidence 779999999999999974 8889999999998664
No 71
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.91 E-value=2.8e-23 Score=177.55 Aligned_cols=157 Identities=8% Similarity=0.001 Sum_probs=120.7
Q ss_pred EEeccCCCeeEEEecC---CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC---CceEEEEecCCCCCe
Q 020480 120 QQINHDGEVNRARYMP---QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS---TEGYGLSWSKFKEGH 193 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~---~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~~p~~~~~ 193 (325)
....|...++.++|++ ++ .+||+|+.|++|+|||+.+ .+.+.++.+|. ..+.+++|+|++. +
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~T----------Gk~l~tL~g~~~~v~~v~~vafSpdG~-~ 240 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKT----------GQLLKKMHIDDSYQASVCHKAYSEMGL-L 240 (356)
T ss_dssp EEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTT----------CCEEEEEECCC---CCCEEEEEEETTE-E
T ss_pred eeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCC----------CcEEEEEcCCCcceeeeEEEEECCCCC-E
Confidence 3457888999999998 45 7999999999999999987 34577787654 4677889999887 4
Q ss_pred E------------EEEeCCCcEEEEeCCCCCCCCcccceEee-----ecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 194 L------------LSGSDDAQICLWDINAAPKNKSLEAMQIF-----KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 194 l------------~s~s~dg~i~iwd~~~~~~~~~~~~~~~~-----~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
+ ++|+.|++|++||..++. .+..+ .+|...+.+..++ + .++|+|+.|++|+|||
T Consensus 241 lvs~s~~~~~w~laSGs~D~tIklWd~~tgk------~l~v~~~~~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWD 311 (356)
T 2w18_A 241 FIVLSHPCAKESESLRSPVFQLIVINPKTTL------SVGVMLYCLPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWD 311 (356)
T ss_dssp EEEEC------------CCEEEEEEETTTTE------EEEEEEECCCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEE
T ss_pred EEEeccCCCcceeeccCCCcEEEEEECCCCE------EEEEEEeeccCCCcceeEccccC--C-CEEEEEcCCCcEEEEE
Confidence 4 678899999999998763 33332 3566555555544 4 5899999999999999
Q ss_pred ccCCCCCCCeeEeeccCCCee-EEEeCCCCCc--cCCCCceEEeeec
Q 020480 257 LRTPSVSKPVQSVVAHQSEVG-VSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~~v~-~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
++++++ +.++.+|...+. +++|+|+|++ +|+.|+++++|+.
T Consensus 312 l~tGk~---l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 312 LLLGQC---TALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp TTTCSE---EEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCcE---EEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999985 888888887655 6899999984 8999999999985
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.3e-23 Score=184.38 Aligned_cols=238 Identities=18% Similarity=0.201 Sum_probs=159.9
Q ss_pred hhhhhhhhhhhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEE
Q 020480 7 EMRGEIEERLINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQ 86 (325)
Q Consensus 7 ~~~~~~~~~~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~ 86 (325)
+.+....+.....-+.+|+.+.. ...+..+...-++.+++|+|++.. .++.|+. +..+.+|++.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~s~~~~~---------~l~~~~~-----dg~i~iw~~~ 76 (425)
T 1r5m_A 13 TVERETQEDDTNSIDSSDDLDGF--VKILKEIVKLDNIVSSTWNPLDES---------ILAYGEK-----NSVARLARIV 76 (425)
T ss_dssp ---------------------CC--CEECEEEEECSCCSEEEECSSCTT---------EEEEEET-----BTEEEEEEEE
T ss_pred hhhhhcccCccccccccccchhh--hhheeeeeccCceEEEEECCCCCc---------EEEEecC-----CceEEEEEEe
Confidence 33333334444444556665442 223444443446889999998741 4555553 3478999882
Q ss_pred CCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE-----------eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeC
Q 020480 87 LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ-----------INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDY 155 (325)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~ 155 (325)
..... +. ..-.+..... .+|.+.|++++|+|++ .+|++|+.||.|++|+.
T Consensus 77 ~~~~~------------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~~ 137 (425)
T 1r5m_A 77 ETDQE------------GK------KYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDG-NSIVTGVENGELRLWNK 137 (425)
T ss_dssp EC------------------------CEEEEEEEEEECCCCCC------CBCEEEEEECTTS-SEEEEEETTSCEEEEET
T ss_pred cccCC------------cc------ccccccccccccccccccccccCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEeC
Confidence 10000 00 0000001111 1267799999999988 79999999999999994
Q ss_pred CCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCcc------
Q 020480 156 SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV------ 229 (325)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~------ 229 (325)
.. ..+..+.+|...|.+++|+|++. +|++++.||.|++||++.+ ..+..+..+...
T Consensus 138 ~~-----------~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~~~~~~~~~ 199 (425)
T 1r5m_A 138 TG-----------ALLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVTILWNVISG------TVMQHFELKETGGSSINA 199 (425)
T ss_dssp TS-----------CEEEEECCCCSCEEEEEECTTSS-EEEEEETTCCEEEEETTTT------EEEEEECCC---------
T ss_pred CC-----------CeeeeccCCCccEEEEEECCCCC-EEEEEecCCeEEEEECCCC------cEEEEeeccccCccceee
Confidence 43 45677889999999999999998 8999999999999999876 445566666655
Q ss_pred ---------EEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEee
Q 020480 230 ---------VEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHR 298 (325)
Q Consensus 230 ---------v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~ 298 (325)
+.+++|+|++ .+++++.+|.|++||++..+ ++..+..|...|.+++|+|++.+ +++.|+.+++|
T Consensus 200 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~---~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~ 274 (425)
T 1r5m_A 200 ENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKT---PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIW 274 (425)
T ss_dssp ------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSS---CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCc---eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 8999999974 68899999999999999887 47888899999999999999974 78889999999
Q ss_pred ecce
Q 020480 299 HSRY 302 (325)
Q Consensus 299 ~~~~ 302 (325)
+++.
T Consensus 275 d~~~ 278 (425)
T 1r5m_A 275 HGGN 278 (425)
T ss_dssp CSSS
T ss_pred ECCC
Confidence 8754
No 73
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.9e-23 Score=201.09 Aligned_cols=232 Identities=18% Similarity=0.278 Sum_probs=179.2
Q ss_pred hHHHHhhhHhc--ChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc
Q 020480 17 INEEYKIWKKN--TPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN 94 (325)
Q Consensus 17 ~~~~~~iw~~~--~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~ 94 (325)
.+.+++||+.. .......+..|. -++.+++|+|+... ..++.|+. ++.|.+|++.
T Consensus 29 ~dg~I~vwd~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~--------~~l~s~s~-----Dg~I~vwd~~-------- 85 (753)
T 3jro_A 29 SDKTIKIFEVEGETHKLIDTLTGHE--GPVWRVDWAHPKFG--------TILASCSY-----DGKVLIWKEE-------- 85 (753)
T ss_dssp TTTEEEEEEEETTEEEEEEEECCCS--SCEEEEEECCTTSC--------SEEEEEET-----TSCEEEEEEE--------
T ss_pred CCCcEEEEecCCCCCccceeccCCc--CceEEEEecCCCCC--------CEEEEEeC-----CCeEEEEECC--------
Confidence 46789999987 333334444454 45899999987322 25666654 3479999875
Q ss_pred ccCCCCcccCCCCCCCCCCCce-EEEEEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 95 DARHYDDDRSDFGGFGCANGKV-QIIQQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
.++. .......|...|++++|+|+ + .++++|+.||.|++||+.. +.....
T Consensus 86 ------------------~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~--------~~~~~~ 138 (753)
T 3jro_A 86 ------------------NGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKE--------NGTTSP 138 (753)
T ss_dssp ------------------TTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCS--------SSCCCC
T ss_pred ------------------CCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeec--------CCCcce
Confidence 1222 23334569999999999998 6 7999999999999999987 333456
Q ss_pred EEEecCCCceEEEEecCC-------------CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC
Q 020480 172 LRLRGHSTEGYGLSWSKF-------------KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238 (325)
Q Consensus 172 ~~~~~h~~~v~~l~~~p~-------------~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 238 (325)
..+.+|...|.+++|+|. +. .+++|+.||.|++||++.+... ..+...+.+|...|.+++|+|+
T Consensus 139 ~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~--~~~~~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 139 IIIDAHAIGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQT--YVLESTLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp EEEECCSSCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTE--EEEEEEECCCSSCEEEEEECCC
T ss_pred eEeecCCCceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCccc--ceeeeeecCCCCcEEEEEeccC
Confidence 677899999999999994 56 8999999999999999876432 1345677889999999999998
Q ss_pred C--CcEEEEEecCCcEEEEEccCCCCC--CCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 239 H--EYLFGSVGDDQYLLIWDLRTPSVS--KPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 239 ~--~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+ ..++++|+.||.|++||+++.... ..+.....|...|++++|+|+|.+ +++.|+.+++|++.
T Consensus 216 ~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 216 VLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp CSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred CCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 3 379999999999999999986421 123333568899999999999985 78899999999976
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.91 E-value=1.4e-23 Score=182.44 Aligned_cols=174 Identities=16% Similarity=0.166 Sum_probs=135.6
Q ss_pred CCCCCCCceEEEEEeccCCCeeEEEecCCCC-cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEe
Q 020480 108 GFGCANGKVQIIQQINHDGEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW 186 (325)
Q Consensus 108 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 186 (325)
.|+.............|...|..++|++++. .++++++.|+.|++||+.. ...+..+.+|.+.|++++|
T Consensus 154 ~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~----------~~~~~~~~~h~~~v~~~~~ 223 (340)
T 4aow_A 154 LWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN----------CKLKTNHIGHTGYLNTVTV 223 (340)
T ss_dssp EECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEE
T ss_pred EEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC----------CceeeEecCCCCcEEEEEE
Confidence 3443333333334456899999999998753 4688999999999999987 4556778899999999999
Q ss_pred cCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC---
Q 020480 187 SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS--- 263 (325)
Q Consensus 187 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~--- 263 (325)
+|++. +|++|+.||.|++||++.. .++..+.. ...|.+++|+|++ .+++++.|+.|++||++.....
T Consensus 224 s~~~~-~l~s~s~Dg~i~iwd~~~~------~~~~~~~~-~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 224 SPDGS-LCASGGKDGQAMLWDLNEG------KHLYTLDG-GDIINALCFSPNR--YWLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp CTTSS-EEEEEETTCEEEEEETTTT------EEEEEEEC-SSCEEEEEECSSS--SEEEEEETTEEEEEETTTTEEEEEE
T ss_pred CCCCC-EEEEEeCCCeEEEEEeccC------ceeeeecC-CceEEeeecCCCC--ceeeccCCCEEEEEECCCCeEEEec
Confidence 99998 8999999999999999976 44555554 4679999999975 3557788999999999876420
Q ss_pred ---CCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 264 ---KPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 264 ---~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
.......+|...|++++|+|+|++ +++.|+++++|++.
T Consensus 294 ~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 294 KQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp CCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 011223568899999999999984 88999999999875
No 75
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=1.1e-23 Score=184.27 Aligned_cols=235 Identities=13% Similarity=0.110 Sum_probs=168.1
Q ss_pred hHHHHhhhHhcChh-HHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 17 INEEYKIWKKNTPF-LYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 17 ~~~~~~iw~~~~~~-~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
.+.++++|+.+... ....+..|.. ++.+++|.|....... ...++.+.. +..+.+|++.-.
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~s~~----~~~l~~~~~-----d~~i~vwd~~~~------- 149 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKE--IINAIDGIGGLGIGEG----APEIVTGSR-----DGTVKVWDPRQK------- 149 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSS--CEEEEEEESGGGCC-C----CCEEEEEET-----TSCEEEECTTSC-------
T ss_pred CCCeEEEEeCCCCCccEEEEEeccc--ceEEEeeccccccCCC----ccEEEEEeC-----CCeEEEEeCCCC-------
Confidence 56789999998765 4444555544 4778877652110000 124555554 236788765311
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEecc----CCCeeEEE----ecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINH----DGEVNRAR----YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA 167 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~v~----~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~ 167 (325)
...+.. ...| ...|.++. |+|++ .++++|+.||.|++||++. +
T Consensus 150 -----------------~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~--------~- 200 (357)
T 3i2n_A 150 -----------------DDPVAN--MEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRN--------M- 200 (357)
T ss_dssp -----------------SSCSEE--ECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTT--------T-
T ss_pred -----------------CCccee--ccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECcc--------C-
Confidence 001111 1122 34788888 67777 7999999999999999987 2
Q ss_pred CCCcEEEecCCCceEEEEecC---CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEE
Q 020480 168 CSPDLRLRGHSTEGYGLSWSK---FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFG 244 (325)
Q Consensus 168 ~~~~~~~~~h~~~v~~l~~~p---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~ 244 (325)
. ......|...|.+++|+| ++. .+++|+.||.|++||++.......+ ....+.+|...|.+++|+|++..+|+
T Consensus 201 -~-~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~ 276 (357)
T 3i2n_A 201 -A-LRWETNIKNGVCSLEFDRKDISMN-KLVATSLEGKFHVFDMRTQHPTKGF-ASVSEKAHKSTVWQVRHLPQNRELFL 276 (357)
T ss_dssp -E-EEEEEECSSCEEEEEESCSSSSCC-EEEEEESTTEEEEEEEEEEETTTEE-EEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred -c-eeeecCCCCceEEEEcCCCCCCCC-EEEEECCCCeEEEEeCcCCCcccce-eeeccCCCcCCEEEEEECCCCCcEEE
Confidence 2 244567899999999999 777 8999999999999999876432211 11234589999999999998755899
Q ss_pred EEecCCcEEEEEccCCCCC----------------CCeeEeeccCCCeeEEEeCCCCCc---cCCCCceEEeeecce
Q 020480 245 SVGDDQYLLIWDLRTPSVS----------------KPVQSVVAHQSEVGVSILNASFRL---SHEDTCTCTHRHSRY 302 (325)
Q Consensus 245 s~~~dg~i~iwd~~~~~~~----------------~~~~~~~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~~ 302 (325)
+|+.||.|++||++..... ..+..+.+|..+|++++|+|++.+ +++.|+.+++|++..
T Consensus 277 ~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 277 TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 9999999999999976532 246667889999999999999984 578999999998764
No 76
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.9e-23 Score=178.11 Aligned_cols=242 Identities=13% Similarity=0.101 Sum_probs=178.0
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCc-c
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEN-D 95 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~-~ 95 (325)
.+..+++|+.+...+...+..|. -++.+++|.|+.. .++.+... ..+.++++.-....... .
T Consensus 37 ~dg~v~vw~~~~~~~~~~~~~~~--~~v~~~~~~~~~~----------~l~~~~~d-----g~i~~~~~~~~~~~~~~~~ 99 (313)
T 3odt_A 37 RDGTVRLWSKDDQWLGTVVYTGQ--GFLNSVCYDSEKE----------LLLFGGKD-----TMINGVPLFATSGEDPLYT 99 (313)
T ss_dssp TTSEEEEEEESSSEEEEEEEECS--SCEEEEEEETTTT----------EEEEEETT-----SCEEEEETTCCTTSCC-CE
T ss_pred cCCcEEEEECCCCEEEEEeecCC--ccEEEEEECCCCC----------EEEEecCC-----CeEEEEEeeecCCCCcccc
Confidence 56789999998876666666664 4589999999764 44455432 24555544211100000 0
Q ss_pred cC---------CC-------CcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCC
Q 020480 96 AR---------HY-------DDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHP 159 (325)
Q Consensus 96 ~~---------~~-------~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~ 159 (325)
.. .. ...++.+..|+ ..-.......|...|.++.|.|....++++++.||.|++||..
T Consensus 100 ~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--- 173 (313)
T 3odt_A 100 LIGHQGNVCSLSFQDGVVISGSWDKTAKVWK---EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--- 173 (313)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEE---TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT---
T ss_pred hhhcccCEEEEEecCCEEEEEeCCCCEEEEc---CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC---
Confidence 00 00 00112233333 1122233456999999999998444799999999999999943
Q ss_pred CCCCCCCCCCCcEEEec-CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC
Q 020480 160 SKPPLDGACSPDLRLRG-HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR 238 (325)
Q Consensus 160 ~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~ 238 (325)
.....+.. |...+.+++|+|++. +++++.||.|++||++.+ .++..+.+|...|.+++|+|+
T Consensus 174 ---------~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~dg~i~i~d~~~~------~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 174 ---------KVIKTFSGIHNDVVRHLAVVDDGH--FISCSNDGLIKLVDMHTG------DVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp ---------EEEEEECSSCSSCEEEEEEEETTE--EEEEETTSEEEEEETTTC------CEEEEEECCSSCEEEEEECTT
T ss_pred ---------ceEEEEeccCcccEEEEEEcCCCe--EEEccCCCeEEEEECCch------hhhhhhhcCCceEEEEEEecC
Confidence 23555666 899999999999876 899999999999999876 467788899999999999998
Q ss_pred CCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeeccee
Q 020480 239 HEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 239 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~~ 303 (325)
+ .+++++.||.|++||+++++ .+..+..|..+|.+++|+|++++ +++.|+.+++|+++.-
T Consensus 237 ~--~l~~~~~dg~v~iwd~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~ 297 (313)
T 3odt_A 237 G--DIVSCGEDRTVRIWSKENGS---LKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKS 297 (313)
T ss_dssp S--CEEEEETTSEEEEECTTTCC---EEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGG
T ss_pred C--CEEEEecCCEEEEEECCCCc---eeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCC
Confidence 7 48899999999999999987 48888889999999999999986 8889999999997653
No 77
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.4e-22 Score=177.58 Aligned_cols=236 Identities=11% Similarity=0.093 Sum_probs=181.3
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...+...+. ..-++.+++|.|+.. .++++..........+.++++...........
T Consensus 94 ~dg~i~iwd~~~~~~~~~~~---~~~~v~~~~~~~~~~----------~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~ 160 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVATWK---SPVPVKRVEFSPCGN----------YFLAILDNVMKNPGSINIYEIERDSATHELTK 160 (369)
T ss_dssp TTTEEEEEETTTCCEEEEEE---CSSCEEEEEECTTSS----------EEEEEECCBTTBCCEEEEEEEEECTTTCCEEE
T ss_pred CCCeEEEEECCCCcEEEEee---cCCCeEEEEEccCCC----------EEEEecCCccCCCCEEEEEEecCCccceeecc
Confidence 46789999988765544333 445689999999874 56666654344456899998863321111100
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCC--CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDG--EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL 174 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~ 174 (325)
. ...... ....|.+ .+.+++|+|++ .+|++|+.||.|++||+.. ....+..+
T Consensus 161 ~--------------~~~~~~--~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~---------~~~~~~~~ 214 (369)
T 3zwl_B 161 V--------------SEEPIH--KIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSN---------NYEYVDSI 214 (369)
T ss_dssp E--------------CSSCSE--EEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTT---------TTEEEEEE
T ss_pred c--------------ccceee--eccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCC---------CcEeEEEE
Confidence 0 011122 2345555 99999999988 6999999999999999975 12446778
Q ss_pred ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC----
Q 020480 175 RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ---- 250 (325)
Q Consensus 175 ~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg---- 250 (325)
..|...|.+++|+|++. +|++++.||.|++||++.+ ..+..+. +...+..++|+|++ .++++++.++
T Consensus 215 ~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~ 285 (369)
T 3zwl_B 215 DLHEKSISDMQFSPDLT-YFITSSRDTNSFLVDVSTL------QVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDV 285 (369)
T ss_dssp ECCSSCEEEEEECTTSS-EEEEEETTSEEEEEETTTC------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC----
T ss_pred ecCCCceeEEEECCCCC-EEEEecCCceEEEEECCCC------ceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceE
Confidence 88999999999999998 8999999999999999876 3455555 77889999999997 6888888888
Q ss_pred ----------cEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeeccee
Q 020480 251 ----------YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 251 ----------~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~~ 303 (325)
.+++||+++.+ ++..+.+|...|++++|+|++.+ +++.|+.+++|++..-
T Consensus 286 ~~~~~~~~~~~i~~~d~~~~~---~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 286 TTTSANEGKFEARFYHKIFEE---EIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ---------CEEEEEETTTCC---EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred EEEecCCCcceeEEEecCCCc---chhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 89999999987 48888999999999999999985 8889999999987653
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=7.1e-23 Score=197.10 Aligned_cols=212 Identities=15% Similarity=0.172 Sum_probs=166.7
Q ss_pred HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCC
Q 020480 34 LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN 113 (325)
Q Consensus 34 ~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (325)
.+..|.. ++.+++|+|++. .++.|.. +..|.+|++.-
T Consensus 4 ~l~gH~~--~V~~l~~s~dg~----------~latg~~-----dg~I~vwd~~~-------------------------- 40 (753)
T 3jro_A 4 IANAHNE--LIHDAVLDYYGK----------RLATCSS-----DKTIKIFEVEG-------------------------- 40 (753)
T ss_dssp ----CCC--CEEEECCCSSSC----------CEEEEET-----TTEEEEEEEET--------------------------
T ss_pred ecccCcc--eeEEEEECCCCC----------eEEEEEC-----CCcEEEEecCC--------------------------
Confidence 4455654 489999999874 4666654 34899998751
Q ss_pred CceEE-EEEeccCCCeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC-
Q 020480 114 GKVQI-IQQINHDGEVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF- 189 (325)
Q Consensus 114 ~~~~~-~~~~~h~~~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~- 189 (325)
+.... ....+|.+.|++++|+|+ + ++|++|+.||.|++||+.. +.......+.+|...|++++|+|+
T Consensus 41 ~~~~~~~~l~~h~~~V~~l~~s~~~~~-~~l~s~s~Dg~I~vwd~~~--------~~~~~~~~~~~h~~~V~~v~~sp~~ 111 (753)
T 3jro_A 41 ETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLIWKEEN--------GRWSQIAVHAVHSASVNSVQWAPHE 111 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCTTSC-SEEEEEETTSCEEEEEEET--------TEEEEEEEECCCSSCEEEEEECCGG
T ss_pred CCCccceeccCCcCceEEEEecCCCCC-CEEEEEeCCCeEEEEECCC--------CcccccccccCCCCCeEEEEECCCC
Confidence 12222 234469999999999987 6 7999999999999999987 333356777889999999999999
Q ss_pred -CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC------------CCcEEEEEecCCcEEEEE
Q 020480 190 -KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR------------HEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 190 -~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~------------~~~~l~s~~~dg~i~iwd 256 (325)
+. .+++|+.||.|++||++.... .....+.+|...|.+++|+|. +..++++|+.||.|++||
T Consensus 112 ~~~-~l~sgs~dg~I~vwdl~~~~~----~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd 186 (753)
T 3jro_A 112 YGP-LLLVASSDGKVSVVEFKENGT----TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWK 186 (753)
T ss_dssp GCS-EEEEEETTSEEEEEECCSSSC----CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEE
T ss_pred CCC-EEEEEeCCCcEEEEEeecCCC----cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEe
Confidence 77 899999999999999987643 234456789999999999994 236899999999999999
Q ss_pred ccCCCCC-CCeeEeeccCCCeeEEEeCCC---CCc--cCCCCceEEeeecce
Q 020480 257 LRTPSVS-KPVQSVVAHQSEVGVSILNAS---FRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 257 ~~~~~~~-~~~~~~~~h~~~v~~i~~~p~---~~~--~~~~d~~~~~~~~~~ 302 (325)
+++.... .....+.+|..+|++++|+|+ +.+ +++.|+++++|+.+.
T Consensus 187 ~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~ 238 (753)
T 3jro_A 187 YNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDN 238 (753)
T ss_dssp EETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESS
T ss_pred ccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCC
Confidence 9987531 234566889999999999999 664 889999999999765
No 79
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.91 E-value=1e-22 Score=176.71 Aligned_cols=173 Identities=16% Similarity=0.203 Sum_probs=141.3
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC--CCCeEEEEe
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSGS 198 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~s 198 (325)
..+|.+.|++++|+|++ .+||+|+.||.|++|++.... ........+.+|...|++++|+|. +. +|++|+
T Consensus 7 ~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~ 78 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDT------SNWELSDSWRAHDSSIVAIDWASPEYGR-IIASAS 78 (351)
T ss_dssp ECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSS------CCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEE
T ss_pred CcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCC------CcceecceeccCCCcEEEEEEcCCCCCC-EEEEEc
Confidence 35799999999999988 799999999999999998611 112345667899999999999994 66 899999
Q ss_pred CCCcEEEEeCCCCCCC---CcccceEeeecCCccEEEEEeecC--CCcEEEEEecCCcEEEEEccCCCCCCC--------
Q 020480 199 DDAQICLWDINAAPKN---KSLEAMQIFKVHEGVVEDVAWHLR--HEYLFGSVGDDQYLLIWDLRTPSVSKP-------- 265 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~---~~~~~~~~~~~~~~~v~~v~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~-------- 265 (325)
.||.|++||++.+... ....++..+..|...|.+++|+|+ + .++++++.||.|++||+++.+....
T Consensus 79 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 157 (351)
T 3f3f_A 79 YDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMK 157 (351)
T ss_dssp TTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEE
T ss_pred CCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhcccccccccc
Confidence 9999999999876432 111346677889999999999998 6 6999999999999999987653211
Q ss_pred -------------------------------------------------eeEeeccCCCeeEEEeCCCC----C--ccCC
Q 020480 266 -------------------------------------------------VQSVVAHQSEVGVSILNASF----R--LSHE 290 (325)
Q Consensus 266 -------------------------------------------------~~~~~~h~~~v~~i~~~p~~----~--~~~~ 290 (325)
+..+.+|...|++++|+|++ . ++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 158 VLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp SCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred ccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 33446789999999999997 4 3889
Q ss_pred CCceEEeeecce
Q 020480 291 DTCTCTHRHSRY 302 (325)
Q Consensus 291 ~d~~~~~~~~~~ 302 (325)
.|+.+++|+++.
T Consensus 238 ~dg~i~iwd~~~ 249 (351)
T 3f3f_A 238 KDGRIRIFKITE 249 (351)
T ss_dssp TTSCEEEEEEEE
T ss_pred CCCeEEEEeCCC
Confidence 999999999876
No 80
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.3e-22 Score=177.90 Aligned_cols=212 Identities=17% Similarity=0.222 Sum_probs=159.2
Q ss_pred HHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCC
Q 020480 32 YDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGC 111 (325)
Q Consensus 32 y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (325)
+..+..|.. ++.+++|+|+... ...++.|... ..|.+|++.-.
T Consensus 32 ~~~~~~h~~--~v~~~~~~~~~~~-------g~~l~~~~~d-----g~i~iw~~~~~----------------------- 74 (368)
T 3mmy_A 32 IEVTSSPDD--SIGCLSFSPPTLP-------GNFLIAGSWA-----NDVRCWEVQDS----------------------- 74 (368)
T ss_dssp EECSSCCSS--CEEEEEECCTTSS-------SEEEEEEETT-----SEEEEEEECTT-----------------------
T ss_pred eEeccCCCC--ceEEEEEcCCCCC-------ceEEEEECCC-----CcEEEEEcCCC-----------------------
Confidence 334455544 4899999998411 0356666543 47999988411
Q ss_pred CCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEe--cCC
Q 020480 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSW--SKF 189 (325)
Q Consensus 112 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~p~ 189 (325)
+.........|.+.|++++|+|++ .+|++|+.||.|++||+.. .....+.+|...|.+++| +|+
T Consensus 75 --~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg~v~iwd~~~-----------~~~~~~~~~~~~v~~~~~~~~~~ 140 (368)
T 3mmy_A 75 --GQTIPKAQQMHTGPVLDVCWSDDG-SKVFTASCDKTAKMWDLSS-----------NQAIQIAQHDAPVKTIHWIKAPN 140 (368)
T ss_dssp --SCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT-----------TEEEEEEECSSCEEEEEEEECSS
T ss_pred --CceeEEEeccccCCEEEEEECcCC-CEEEEEcCCCcEEEEEcCC-----------CCceeeccccCceEEEEEEeCCC
Confidence 122223456799999999999988 7999999999999999987 223446789999999999 888
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCCCCCcc----------------------------------------------------
Q 020480 190 KEGHLLSGSDDAQICLWDINAAPKNKSL---------------------------------------------------- 217 (325)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~---------------------------------------------------- 217 (325)
+. +|++++.||.|++||++.+.....+
T Consensus 141 ~~-~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (368)
T 3mmy_A 141 YS-CVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVA 219 (368)
T ss_dssp CE-EEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEE
T ss_pred CC-EEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEE
Confidence 87 8999999999999999875421000
Q ss_pred --------------------------------cceEeeecCCc------------cEEEEEeecCCCcEEEEEecCCcEE
Q 020480 218 --------------------------------EAMQIFKVHEG------------VVEDVAWHLRHEYLFGSVGDDQYLL 253 (325)
Q Consensus 218 --------------------------------~~~~~~~~~~~------------~v~~v~~~p~~~~~l~s~~~dg~i~ 253 (325)
.....+.+|.. .|.+++|+|++ .+|++|+.||.|+
T Consensus 220 ~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~ 298 (368)
T 3mmy_A 220 IFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFS 298 (368)
T ss_dssp EEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEE
T ss_pred EcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEE
Confidence 11223344443 69999999987 6899999999999
Q ss_pred EEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeee
Q 020480 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRH 299 (325)
Q Consensus 254 iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~ 299 (325)
+||+++++ .+..+..|..+|++++|+|+|.+ +++.|+..+.++
T Consensus 299 iwd~~~~~---~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 299 FWDKDART---KLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEETTTTE---EEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred EEECCCCc---EEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 99999887 48888899999999999999985 666666555544
No 81
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.91 E-value=7e-23 Score=179.50 Aligned_cols=161 Identities=17% Similarity=0.170 Sum_probs=133.7
Q ss_pred cCCCeeEEEecCCC---CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecC-CCCCeEEEEeC
Q 020480 124 HDGEVNRARYMPQN---PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK-FKEGHLLSGSD 199 (325)
Q Consensus 124 h~~~v~~v~~~~~~---~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p-~~~~~l~s~s~ 199 (325)
|.+.|++++|+|++ ..+|++|+.||.|++||+.. ...+..+.+|...|.+++|+| ++. +|++|+.
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~ 136 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPIT----------MQCIKHYVGHGNAINELKFHPRDPN-LLLSVSK 136 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTT----------CCEEEEEESCCSCEEEEEECSSCTT-EEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchh----------ceEeeeecCCCCcEEEEEECCCCCC-EEEEEeC
Confidence 78999999999983 26999999999999999987 355778889999999999999 666 9999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEee---ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC-------------
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS------------- 263 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~------------- 263 (325)
||.|++||++.+ ..+..+ .+|...|.+++|+|++ .+|++++.||.|++||+++.+..
T Consensus 137 dg~i~iwd~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 209 (366)
T 3k26_A 137 DHALRLWNIQTD------TLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNK 209 (366)
T ss_dssp TSCEEEEETTTT------EEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGG
T ss_pred CCeEEEEEeecC------eEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCC
Confidence 999999999876 345555 6799999999999987 69999999999999999876420
Q ss_pred ------------CCeeEeeccCCCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 264 ------------KPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 264 ------------~~~~~~~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
.......+|...|.+++|+++-.++++.|+.+++|+++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~~wd~~~ 260 (366)
T 3k26_A 210 TNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCENAIVCWKPGK 260 (366)
T ss_dssp CSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSSSEEEEEEESS
T ss_pred CcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecCCEEEEEeCCC
Confidence 011222348999999999944334889999999999754
No 82
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=7.3e-22 Score=171.03 Aligned_cols=203 Identities=14% Similarity=0.151 Sum_probs=162.5
Q ss_pred CCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEE
Q 020480 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (325)
Q Consensus 41 ~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (325)
.-++.+++|.|++. .++.+. ++.+.+|++.-.. ....+....
T Consensus 51 ~~~v~~~~~~~~~~----------~l~~~~------dg~i~iw~~~~~~----------------------~~~~~~~~~ 92 (337)
T 1gxr_A 51 GEVVCAVTISNPTR----------HVYTGG------KGCVKVWDISHPG----------------------NKSPVSQLD 92 (337)
T ss_dssp SSCCCEEEECSSSS----------EEEEEC------BSEEEEEETTSTT----------------------CCSCSEEEE
T ss_pred CCceEEEEEecCCc----------EEEEcC------CCeEEEEECCCCC----------------------ceeeeeccc
Confidence 45688999999874 444443 2578888763110 012233333
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
...|...|.+++|+|++ ++|++|+.||.|++|++.. +.......+..|...+.+++|+|++. ++++++.|
T Consensus 93 ~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~--------~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~d 162 (337)
T 1gxr_A 93 CLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAA--------PTPRIKAELTSSAPACYALAISPDSK-VCFSCCSD 162 (337)
T ss_dssp CSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCC--------C--EEEEEEECSSSCEEEEEECTTSS-EEEEEETT
T ss_pred ccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCC--------CCcceeeecccCCCceEEEEECCCCC-EEEEEeCC
Confidence 44799999999999988 7999999999999999987 33334567788999999999999988 89999999
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
|.|++||++.+ ..+..+..|...|.+++|+|++ .++++++.||.|++||+++.+. +..+ .+...+.+++
T Consensus 163 g~v~~~d~~~~------~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~---~~~~-~~~~~v~~~~ 231 (337)
T 1gxr_A 163 GNIAVWDLHNQ------TLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQ---LQQH-DFTSQIFSLG 231 (337)
T ss_dssp SCEEEEETTTT------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE---EEEE-ECSSCEEEEE
T ss_pred CcEEEEeCCCC------ceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCce---Eeee-cCCCceEEEE
Confidence 99999999876 4577788899999999999987 6999999999999999998873 4444 4788999999
Q ss_pred eCCCCCc--cCCCCceEEeeecce
Q 020480 281 LNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 281 ~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
|+|++.+ +++.++.+++|+++.
T Consensus 232 ~s~~~~~l~~~~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 232 YCPTGEWLAVGMESSNVEVLHVNK 255 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCC
Confidence 9999985 777899999998754
No 83
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.6e-23 Score=187.17 Aligned_cols=161 Identities=14% Similarity=0.087 Sum_probs=140.4
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
...|...|.+++|+|++ .+|++++.||.|++||+.. ......+.+|...|.+++|+|++ .+++++.|
T Consensus 243 ~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~----------~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d 309 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGN----------GNSQNCFYGHSQSIVSASWVGDD--KVISCSMD 309 (425)
T ss_dssp ECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSS----------BSCSEEECCCSSCEEEEEEETTT--EEEEEETT
T ss_pred eccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCC----------CccceEecCCCccEEEEEECCCC--EEEEEeCC
Confidence 34689999999999988 6999999999999999987 45577888999999999999987 79999999
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC-----------------C
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-----------------S 263 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-----------------~ 263 (325)
|.|++||++.+ ..+..+..|...|.+++|+|++ .+|++++.||.|++||+++... .
T Consensus 310 ~~i~i~d~~~~------~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (425)
T 1r5m_A 310 GSVRLWSLKQN------TLLALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI 382 (425)
T ss_dssp SEEEEEETTTT------EEEEEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEEC
T ss_pred CcEEEEECCCC------cEeEecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccc
Confidence 99999999876 5677788899999999999987 6999999999999999987650 0
Q ss_pred CCeeEeeccCC--CeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 264 KPVQSVVAHQS--EVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 264 ~~~~~~~~h~~--~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
.++..+..|.. .|++++|+|++++ +++.|+.+++|++.
T Consensus 383 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 383 PLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred hhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 13677788866 9999999999984 78899999999864
No 84
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=8.7e-22 Score=172.04 Aligned_cols=205 Identities=13% Similarity=0.237 Sum_probs=158.8
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE
Q 020480 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (325)
Q Consensus 42 ~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (325)
-++.+++|+|++. ..++.|+. ...++.+.+|++. .++......
T Consensus 19 ~~v~~~~~~p~~~---------~l~~~~s~--~~~d~~v~iw~~~--------------------------~~~~~~~~~ 61 (357)
T 3i2n_A 19 YTVFDCKWVPCSA---------KFVTMGNF--ARGTGVIQLYEIQ--------------------------HGDLKLLRE 61 (357)
T ss_dssp SCEEEEEECTTSS---------EEEEEEC----CCCEEEEEEEEC--------------------------SSSEEEEEE
T ss_pred CceEEEEEcCCCc---------eEEEecCc--cCCCcEEEEEeCC--------------------------CCcccceee
Confidence 3589999999874 23344433 1234689999874 234455556
Q ss_pred eccCCCeeEEEecCCC--CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEE------ecCCCCCe
Q 020480 122 INHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLS------WSKFKEGH 193 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~--~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~------~~p~~~~~ 193 (325)
.+|...|.+++|+|++ ..+|++|+.||.|++|++.. +. .++..+.+|...|.+++ |+|++. +
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~--------~~-~~~~~~~~~~~~v~~~~~~~~~~~s~~~~-~ 131 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEA--------PE-MPVYSVKGHKEIINAIDGIGGLGIGEGAP-E 131 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTS--------CS-SCSEEECCCSSCEEEEEEESGGGCC-CCC-E
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCC--------CC-ccEEEEEecccceEEEeeccccccCCCcc-E
Confidence 6899999999999983 37999999999999999987 21 25778899999999995 567887 8
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCc----cEEEEE----eecCCCcEEEEEecCCcEEEEEccCCCCCCC
Q 020480 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG----VVEDVA----WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKP 265 (325)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~----~v~~v~----~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 265 (325)
|++++.||.|++||++.+.. ++..+..|.. .+.+++ |+|++ .++++++.||.|++||+++.+
T Consensus 132 l~~~~~d~~i~vwd~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~---- 201 (357)
T 3i2n_A 132 IVTGSRDGTVKVWDPRQKDD-----PVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA---- 201 (357)
T ss_dssp EEEEETTSCEEEECTTSCSS-----CSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE----
T ss_pred EEEEeCCCeEEEEeCCCCCC-----cceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc----
Confidence 99999999999999998642 3445544443 788888 67776 699999999999999999887
Q ss_pred eeEeeccCCCeeEEEeCC---CCCc--cCCCCceEEeeeccee
Q 020480 266 VQSVVAHQSEVGVSILNA---SFRL--SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 266 ~~~~~~h~~~v~~i~~~p---~~~~--~~~~d~~~~~~~~~~~ 303 (325)
......|...|.+++|+| ++.. +++.|+.+++|+++..
T Consensus 202 ~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 202 LRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQ 244 (357)
T ss_dssp EEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEE
T ss_pred eeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCC
Confidence 344467899999999999 6763 8889999999997653
No 85
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=3.9e-23 Score=186.49 Aligned_cols=253 Identities=12% Similarity=0.104 Sum_probs=168.9
Q ss_pred hHHHHhhhHhcChh-----------HHHHhhhcCCC----------CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCC
Q 020480 17 INEEYKIWKKNTPF-----------LYDLVITHALE----------WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSEN 75 (325)
Q Consensus 17 ~~~~~~iw~~~~~~-----------~y~~~~~~~~~----------~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (325)
.+..++||+.+... ++..+..|..+ -++.+++|.|+.... .++.++.
T Consensus 48 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~--------~l~s~s~---- 115 (447)
T 3dw8_B 48 KGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAA--------QFLLSTN---- 115 (447)
T ss_dssp TTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSS--------EEEEEEC----
T ss_pred CCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcc--------eEEEeCC----
Confidence 56789999988765 34455555522 468899999986321 4555543
Q ss_pred CCCeEEEEEEECCCCCCCcccCCCCcccCCC----CCCCCCCCce---------EE--EEEeccCCCeeEEEecCCCCcE
Q 020480 76 EPNYLMLAQVQLPLDDSENDARHYDDDRSDF----GGFGCANGKV---------QI--IQQINHDGEVNRARYMPQNPFL 140 (325)
Q Consensus 76 ~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~---------~~--~~~~~h~~~v~~v~~~~~~~~~ 140 (325)
+..|.+|++.-.... ..........+.+ .......+.+ .. ....+|...|.+++|+|++ .+
T Consensus 116 -d~~i~iw~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~ 191 (447)
T 3dw8_B 116 -DKTIKLWKISERDKR--PEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDY-ET 191 (447)
T ss_dssp -SSCEEEEEEEEEEEE--EECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTS-SE
T ss_pred -CCeEEEEecccccCC--cceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCC-CE
Confidence 347888887521100 0000000000000 0000011111 11 1124699999999999988 68
Q ss_pred EEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-------EEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCC
Q 020480 141 IATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-------RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK 213 (325)
Q Consensus 141 la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~-------~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~ 213 (325)
|++| .||.|++||+... ..... .+.+|...|.+++|+|++..+|++|+.||.|++||++.+..
T Consensus 192 l~s~-~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 192 YLSA-DDLRINLWHLEIT---------DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEEE-CSSEEEEEETTEE---------EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EEEe-CCCeEEEEECCCC---------CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 9998 7999999999841 11111 24589999999999999844999999999999999998742
Q ss_pred CCcccceEeeecCCc------------cEEEEEeecCCCcEEEEEecCCcEEEEEccC-CCCCCCeeEeeccCCC-----
Q 020480 214 NKSLEAMQIFKVHEG------------VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVAHQSE----- 275 (325)
Q Consensus 214 ~~~~~~~~~~~~~~~------------~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~h~~~----- 275 (325)
.. .....+..|.. .|.+++|+|++ .+|++++. +.|++||++. ++ ++..+..|...
T Consensus 262 ~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~---~~~~~~~~~~~~~~l~ 334 (447)
T 3dw8_B 262 CD--RHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENR---PVETYQVHEYLRSKLC 334 (447)
T ss_dssp SC--TTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSS---CSCCEESCGGGTTTHH
T ss_pred cc--ceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCcc---ccceeecccccccccc
Confidence 11 12456677765 89999999987 68889988 9999999997 55 47777777532
Q ss_pred ----------eeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 276 ----------VGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 276 ----------v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+..++|+|++.+ +++.|+.+++|++..
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~ 373 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNT 373 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTT
T ss_pred ccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCC
Confidence 334999999984 889999999999754
No 86
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=1.4e-22 Score=184.16 Aligned_cols=229 Identities=16% Similarity=0.170 Sum_probs=176.4
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..+.++++|+.....+...+..|.. ++.+++|.|+. .++.|+.. ..+.+|++.
T Consensus 139 s~dg~i~vwd~~~~~~~~~~~~h~~--~V~~l~~~~~~-----------~l~s~s~d-----g~i~vwd~~--------- 191 (464)
T 3v7d_B 139 ADDKMIRVYDSINKKFLLQLSGHDG--GVWALKYAHGG-----------ILVSGSTD-----RTVRVWDIK--------- 191 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECSTT-----------EEEEEETT-----SCEEEEETT---------
T ss_pred cCCCcEEEEECCCCcEEEEEeCCCc--CEEEEEEcCCC-----------EEEEEeCC-----CCEEEEECC---------
Confidence 3567899999888776666666654 48899998864 35555543 468888652
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecC--CCCcEEEEEecCCeEEEEeCCCCCCCCCCC--------
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMP--QNPFLIATKTVSAEVYVFDYSKHPSKPPLD-------- 165 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~--~~~~~la~g~~dg~v~vwd~~~~~~~~~~~-------- 165 (325)
.++ ......+|.+.|.+++|++ ++ .++++|+.||.|++||+..........
T Consensus 192 -----------------~~~-~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 192 -----------------KGC-CTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp -----------------TTE-EEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred -----------------CCc-EEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 122 2223446999999999995 44 799999999999999998632111000
Q ss_pred -----CCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC
Q 020480 166 -----GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE 240 (325)
Q Consensus 166 -----~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~ 240 (325)
........+.+|...+.++. +++. ++++|+.||.|++||++.+ .++..+.+|...|.+++|+|++
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~- 322 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQM------KCLYILSGHTDRIYSTIYDHER- 322 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEEETTT-
T ss_pred eeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCCC------cEEEEecCCCCCEEEEEEcCCC-
Confidence 00011446778999998885 4566 8999999999999999876 5678888999999999999987
Q ss_pred cEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCccCCCCceEEeeeccee
Q 020480 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHSRYL 303 (325)
Q Consensus 241 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~~ 303 (325)
..+++|+.||.|++||+++++ ++..+.+|...|.+++|++.-.++++.|+++++|+++..
T Consensus 323 ~~l~sg~~dg~i~vwd~~~~~---~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 323 KRCISASMDTTIRIWDLENGE---LMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEECSSEEEEEETTSEEEEEETTTC
T ss_pred CEEEEEeCCCcEEEEECCCCc---EEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEEEEECCCC
Confidence 689999999999999999987 488889999999999999755569999999999998653
No 87
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.90 E-value=1.2e-22 Score=180.44 Aligned_cols=232 Identities=13% Similarity=0.075 Sum_probs=173.2
Q ss_pred hHHHHhhhHhcChh------HHHHhhhcCCCCCceEEEEeeC----CCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEE
Q 020480 17 INEEYKIWKKNTPF------LYDLVITHALEWPSLTVEWLPD----REEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQ 86 (325)
Q Consensus 17 ~~~~~~iw~~~~~~------~y~~~~~~~~~~p~~s~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~ 86 (325)
.+.++++|+..... +...+..|. -++.+++|.|+ +.. ...++.+.. ++.|.+|++.
T Consensus 34 ~dg~i~iw~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~g~~-------~~~l~s~~~-----dg~i~iw~~~ 99 (397)
T 1sq9_A 34 GDGYLKVWDNKLLDNENPKDKSYSHFVHK--SGLHHVDVLQAIERDAFE-------LCLVATTSF-----SGDLLFYRIT 99 (397)
T ss_dssp TTSEEEEEESBCCTTCCGGGGEEEEECCT--TCEEEEEEEEEEETTTEE-------EEEEEEEET-----TSCEEEEEEE
T ss_pred CCCEEEEEECCCcccccCCCcceEEecCC--CcEEEEEEecccccCCcc-------ccEEEEEcC-----CCCEEEEEcc
Confidence 45689999998876 444444444 35899999997 410 024555554 3479999885
Q ss_pred CCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEecc-----CCCeeEEEec----CCCCcE-EEEEecCCeEEEEeCC
Q 020480 87 LPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINH-----DGEVNRARYM----PQNPFL-IATKTVSAEVYVFDYS 156 (325)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~v~~~----~~~~~~-la~g~~dg~v~vwd~~ 156 (325)
-.. ...+........| ...|.+++|+ |++ .+ |++|+.||.|++||+.
T Consensus 100 ~~~----------------------~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 100 RED----------------------ETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp ECT----------------------TTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEE
T ss_pred CCc----------------------ccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCC
Confidence 220 0112223334456 5999999999 888 57 9999999999999987
Q ss_pred C------CCCCCCCCCCCCCcEEE-------ecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEee
Q 020480 157 K------HPSKPPLDGACSPDLRL-------RGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF 223 (325)
Q Consensus 157 ~------~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~ 223 (325)
. .... ...+...+ ..|...|.+++|+|++ ++++++.||.|++||++.+ .++..+
T Consensus 157 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~------~~~~~~ 223 (397)
T 1sq9_A 157 PFADESNSLTL-----NWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL------RPLYNF 223 (397)
T ss_dssp SSSSHHHHTTT-----CCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT------EEEEEE
T ss_pred cccccccccee-----eccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC------ceeEEE
Confidence 5 1110 11222255 4488999999999988 7999999999999999876 467777
Q ss_pred ec---C---CccEEEEEeecCCCcEEEEEecC---CcEEEEEccCCCCCCCeeEeec-------------cCCCeeEEEe
Q 020480 224 KV---H---EGVVEDVAWHLRHEYLFGSVGDD---QYLLIWDLRTPSVSKPVQSVVA-------------HQSEVGVSIL 281 (325)
Q Consensus 224 ~~---~---~~~v~~v~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~i~~ 281 (325)
.. | ...|.+++|+|++ .+|++++.| |.|++||+++.+ ++..+.. |...|.+++|
T Consensus 224 ~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 224 ESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGE---RIGSLSVPTHSSQASLGEFAHSSWVMSLSF 299 (397)
T ss_dssp ECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCC---EEEEECBC--------CCBSBSSCEEEEEE
T ss_pred eccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCc---ccceeccCcccccccccccccCCcEEEEEE
Confidence 87 8 9999999999987 699999999 999999999887 4788887 9999999999
Q ss_pred CCCCCc--cCCCCceEEeeecce
Q 020480 282 NASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 282 ~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+|++.+ +++.|+.+++|+++.
T Consensus 300 ~~~~~~l~~~~~dg~i~iwd~~~ 322 (397)
T 1sq9_A 300 NDSGETLCSAGWDGKLRFWDVKT 322 (397)
T ss_dssp CSSSSEEEEEETTSEEEEEETTT
T ss_pred CCCCCEEEEEeCCCeEEEEEcCC
Confidence 999985 788999999999753
No 88
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=7.8e-22 Score=171.31 Aligned_cols=215 Identities=13% Similarity=0.142 Sum_probs=169.1
Q ss_pred hHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCC
Q 020480 30 FLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGF 109 (325)
Q Consensus 30 ~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (325)
.|...|..|... +.+++|+|+.. ..++.|+. +..|++|++.-..
T Consensus 29 ~l~~tL~GH~~~--V~~v~~sp~~~---------~~l~S~s~-----D~~i~vWd~~~~~-------------------- 72 (340)
T 4aow_A 29 TLRGTLKGHNGW--VTQIATTPQFP---------DMILSASR-----DKTIIMWKLTRDE-------------------- 72 (340)
T ss_dssp EEEEEECCCSSC--EEEEEECTTCT---------TEEEEEET-----TSCEEEEEECCSS--------------------
T ss_pred EEEEEECCccCC--EEEEEEeCCCC---------CEEEEEcC-----CCeEEEEECCCCC--------------------
Confidence 344456677655 99999999753 14555543 3479999885210
Q ss_pred CCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC
Q 020480 110 GCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF 189 (325)
Q Consensus 110 ~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~ 189 (325)
...........+|...|.+++|+|++ .+|++|+.|+.|++|+... .........+...+..+.+++.
T Consensus 73 --~~~~~~~~~l~~h~~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~ 139 (340)
T 4aow_A 73 --TNYGIPQRALRGHSHFVSDVVISSDG-QFALSGSWDGTLRLWDLTT----------GTTTRRFVGHTKDVLSVAFSSD 139 (340)
T ss_dssp --SCSEEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEECTT
T ss_pred --cccceeeEEEeCCCCCEEEEEECCCC-CEEEEEcccccceEEeecc----------cceeeeecCCCCceeEEEEeec
Confidence 01122333456799999999999998 7999999999999999887 3335556678888999999999
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCC-cEEEEEecCCcEEEEEccCCCCCCCeeE
Q 020480 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHE-YLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (325)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 268 (325)
+. .|++|+.|+.+++||+.... .......+|...+..++|++++. .++++++.|+.|++||+++.+. +..
T Consensus 140 ~~-~l~s~s~d~~~~~~d~~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~---~~~ 210 (340)
T 4aow_A 140 NR-QIVSGSRDKTIKLWNTLGVC-----KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKL---KTN 210 (340)
T ss_dssp SS-CEEEEETTSCEEEECTTSCE-----EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEE---EEE
T ss_pred Cc-cceeecCCCeEEEEEeCCCc-----eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCce---eeE
Confidence 88 89999999999999987653 23444567899999999998653 4778999999999999999874 788
Q ss_pred eeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 269 VVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 269 ~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+.+|..+|++++|+|++.+ +++.|+++++|+++.
T Consensus 211 ~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~ 246 (340)
T 4aow_A 211 HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNE 246 (340)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTT
T ss_pred ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEecc
Confidence 8899999999999999985 889999999998754
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.5e-22 Score=183.68 Aligned_cols=160 Identities=10% Similarity=0.106 Sum_probs=125.7
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-----ceEEEEecCCCCCeEEE
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-----EGYGLSWSKFKEGHLLS 196 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-----~v~~l~~~p~~~~~l~s 196 (325)
..|...|.+++|+|+| .+||+++.||.|++|+... .+..+. |.. .+.+++|+|+|. +|++
T Consensus 82 ~~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~------------~l~~l~-~~~~~~~~sv~svafSPDG~-~LAs 146 (588)
T 2j04_A 82 SQPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK------------MLTNLD-SKGNLSSRTYHCFEWNPIES-SIVV 146 (588)
T ss_dssp TSCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE------------EEEECC-CSSCSTTTCEEEEEECSSSS-CEEE
T ss_pred cCCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc------------eeeecc-CCCccccccEEEEEEcCCCC-EEEE
Confidence 3568899999999999 7999999999999999542 244445 554 599999999999 8999
Q ss_pred EeCCCcEEEEeCCCCCCCC-cccceEee----ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-e
Q 020480 197 GSDDAQICLWDINAAPKNK-SLEAMQIF----KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-V 270 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~-~~~~~~~~----~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~ 270 (325)
|+.||+|++||+..+.... ..-.+..+ .+|...|.+++|+|++ +++++.|++|++||+..........++ .
T Consensus 147 gs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~~~~~tL~~ 223 (588)
T 2j04_A 147 GNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQPVSRMIQN 223 (588)
T ss_dssp EETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSCCCEEEEEC
T ss_pred EcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccccceeeecc
Confidence 9999999999998753100 00024554 5677899999999986 788999999999999887732224556 4
Q ss_pred ccCCCeeEEEeCCCCCc-cCCCCceEEeeecc
Q 020480 271 AHQSEVGVSILNASFRL-SHEDTCTCTHRHSR 301 (325)
Q Consensus 271 ~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~ 301 (325)
+|...|.+++|+ +..+ +++ ++++++|+..
T Consensus 224 ~h~~~V~svaFs-g~~LASa~-~~tIkLWd~~ 253 (588)
T 2j04_A 224 ASRRKITDLKIV-DYKVVLTC-PGYVHKIDLK 253 (588)
T ss_dssp CCSSCCCCEEEE-TTEEEEEC-SSEEEEEETT
T ss_pred cccCcEEEEEEE-CCEEEEEe-CCeEEEEECC
Confidence 788999999999 4444 444 7999999864
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=8.2e-22 Score=177.81 Aligned_cols=221 Identities=14% Similarity=0.174 Sum_probs=156.1
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEE-E
Q 020480 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQII-Q 120 (325)
Q Consensus 42 ~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 120 (325)
-++.+++|+|++. .++.|... ..|.+|++.-...... . ..+.++.. .
T Consensus 29 ~~V~~v~~s~~g~----------~la~g~~d-----g~v~iw~~~~~~~~~~-------~----------~~~~~~~~~~ 76 (447)
T 3dw8_B 29 DIISTVEFNHSGE----------LLATGDKG-----GRVVIFQQEQENKIQS-------H----------SRGEYNVYST 76 (447)
T ss_dssp GSEEEEEECSSSS----------EEEEEETT-----SEEEEEEECC-----C-------C----------CCCCEEEEEE
T ss_pred CcEEEEEECCCCC----------EEEEEcCC-----CeEEEEEecCCCCCCc-------c----------cccceeEecc
Confidence 3688999999874 56666643 4899998852210000 0 11223332 3
Q ss_pred EeccC------------CCeeEEEecCCCC-cEEEEEecCCeEEEEeCCCCCCC-----CC----------CCCCC-C--
Q 020480 121 QINHD------------GEVNRARYMPQNP-FLIATKTVSAEVYVFDYSKHPSK-----PP----------LDGAC-S-- 169 (325)
Q Consensus 121 ~~~h~------------~~v~~v~~~~~~~-~~la~g~~dg~v~vwd~~~~~~~-----~~----------~~~~~-~-- 169 (325)
..+|. +.|++++|+|++. ..|++|+.||.|++|++...... .. ..... .
T Consensus 77 ~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 156 (447)
T 3dw8_B 77 FQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPV 156 (447)
T ss_dssp EECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCE
T ss_pred cccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEecc
Confidence 34687 8899999999863 48999999999999998641100 00 00000 0
Q ss_pred -----------CcEE-EecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceE-------eeecCCccE
Q 020480 170 -----------PDLR-LRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-------IFKVHEGVV 230 (325)
Q Consensus 170 -----------~~~~-~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-------~~~~~~~~v 230 (325)
+... ..+|...|.+++|+|++. +|++| .|+.|++||++... ..+. .+.+|...|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~-~d~~i~iwd~~~~~-----~~~~~~~~~~~~~~~~~~~v 229 (447)
T 3dw8_B 157 FRPMDLMVEASPRRIFANAHTYHINSISINSDYE-TYLSA-DDLRINLWHLEITD-----RSFNIVDIKPANMEELTEVI 229 (447)
T ss_dssp EEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSS-EEEEE-CSSEEEEEETTEEE-----EEEEEEECCCSSGGGCCCCE
T ss_pred ccchheeeeccceEEeccCCCcceEEEEEcCCCC-EEEEe-CCCeEEEEECCCCC-----ceeeeeecccccccccCcce
Confidence 0112 357999999999999988 89998 79999999998432 1222 356899999
Q ss_pred EEEEeecCCCcEEEEEecCCcEEEEEccCCCC-CCCeeEeeccCC------------CeeEEEeCCCCCc--cCCCCceE
Q 020480 231 EDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-SKPVQSVVAHQS------------EVGVSILNASFRL--SHEDTCTC 295 (325)
Q Consensus 231 ~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~h~~------------~v~~i~~~p~~~~--~~~~d~~~ 295 (325)
.+++|+|++..+|++|+.||.|++||+++... ...+..+..|.. .|.+++|+|+|++ +++. +.+
T Consensus 230 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v 308 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSV 308 (447)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEE
T ss_pred EEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeE
Confidence 99999998767999999999999999998772 122567777765 8999999999985 5666 999
Q ss_pred Eeeecce
Q 020480 296 THRHSRY 302 (325)
Q Consensus 296 ~~~~~~~ 302 (325)
++|+++.
T Consensus 309 ~iwd~~~ 315 (447)
T 3dw8_B 309 KVWDLNM 315 (447)
T ss_dssp EEEETTC
T ss_pred EEEeCCC
Confidence 9999875
No 91
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.6e-22 Score=193.40 Aligned_cols=198 Identities=11% Similarity=0.118 Sum_probs=156.0
Q ss_pred CCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEE
Q 020480 41 EWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQ 120 (325)
Q Consensus 41 ~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (325)
.-++.+++|.|++. .++.|+.. ..|++|+.. ..+...
T Consensus 17 ~~~V~~lafspdg~----------~lAsgs~D-----g~I~lw~~~----------------------------~~~~~~ 53 (902)
T 2oaj_A 17 SSKPIAAAFDFTQN----------LLAIATVT-----GEVHIYGQQ----------------------------QVEVVI 53 (902)
T ss_dssp SSCEEEEEEETTTT----------EEEEEETT-----SEEEEECST----------------------------TCEEEE
T ss_pred CCCcEEEEECCCCC----------EEEEEeCC-----CEEEEEeCC----------------------------CcEEEE
Confidence 34589999999874 56666653 378887421 123334
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
...|...|.+++|+| + .+|++++.|+.|++||+.. ...+..+. |...|++++|+|++. ++++|+.|
T Consensus 54 ~~~~~~~V~~l~fsp-g-~~L~S~s~D~~v~lWd~~~----------~~~~~~~~-~~~~V~~v~~sp~g~-~l~sgs~d 119 (902)
T 2oaj_A 54 KLEDRSAIKEMRFVK-G-IYLVVINAKDTVYVLSLYS----------QKVLTTVF-VPGKITSIDTDASLD-WMLIGLQN 119 (902)
T ss_dssp ECSSCCCEEEEEEET-T-TEEEEEETTCEEEEEETTT----------CSEEEEEE-CSSCEEEEECCTTCS-EEEEEETT
T ss_pred EcCCCCCEEEEEEcC-C-CEEEEEECcCeEEEEECCC----------CcEEEEEc-CCCCEEEEEECCCCC-EEEEEcCC
Confidence 567889999999999 7 5999999999999999987 23455564 678999999999998 89999999
Q ss_pred CcEEEEeCCCCCCCCcccce-------EeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-
Q 020480 201 AQICLWDINAAPKNKSLEAM-------QIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH- 272 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~-------~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h- 272 (325)
|.|++||++.+... . ..+ ..+.+|...|.+++|+|++...+++|+.||.| +||+++.+. +..+..|
T Consensus 120 g~V~lwd~~~~~~~-~-~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~---~~~~~~~~ 193 (902)
T 2oaj_A 120 GSMIVYDIDRDQLS-S-FKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI---KQSFIYEL 193 (902)
T ss_dssp SCEEEEETTTTEEE-E-EEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE---EEEECCCB
T ss_pred CcEEEEECCCCccc-c-ceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce---EEEEeccc
Confidence 99999999876320 0 000 23467889999999999765789999999999 999998773 5555544
Q ss_pred -----------------CCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 273 -----------------QSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 273 -----------------~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
...|++++|+|+|.+ +++.|+++++|+++
T Consensus 194 ~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~ 241 (902)
T 2oaj_A 194 PPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDAN 241 (902)
T ss_dssp CTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETT
T ss_pred CCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECC
Confidence 578999999999984 88999999999974
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.89 E-value=1.7e-21 Score=171.93 Aligned_cols=177 Identities=10% Similarity=0.005 Sum_probs=130.6
Q ss_pred CCCeeEEEecCCCCcEEE--EEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 125 DGEVNRARYMPQNPFLIA--TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la--~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
...+.+++|+|+| +++| +++.|+.|+|||+.. ...+..+ .|...|.+++|+|++. ++++++.+ .
T Consensus 133 ~~~~~~v~fSpDg-~~la~as~~~d~~i~iwd~~~----------~~~~~~~-~~~~~V~~v~fspdg~-~l~s~s~~-~ 198 (365)
T 4h5i_A 133 DDYTKLVYISREG-TVAAIASSKVPAIMRIIDPSD----------LTEKFEI-ETRGEVKDLHFSTDGK-VVAYITGS-S 198 (365)
T ss_dssp TCCEEEEEECTTS-SCEEEEESCSSCEEEEEETTT----------TEEEEEE-ECSSCCCEEEECTTSS-EEEEECSS-C
T ss_pred ccCEEEEEEcCCC-CEEEEEECCCCCEEEEeECCC----------CcEEEEe-CCCCceEEEEEccCCc-eEEeccce-e
Confidence 3458899999999 5655 455789999999987 3345555 4778899999999998 88888855 5
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC----cEEEEEccCCCCC-CCeeEeeccCCCee
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ----YLLIWDLRTPSVS-KPVQSVVAHQSEVG 277 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~-~~~~~~~~h~~~v~ 277 (325)
+.+|+...+.. ........|...|.+++|+|++ ..+++++.|+ .+++|++...... .....+.+|..+|+
T Consensus 199 ~~~~~~~~~~~----~~~~~~~~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~ 273 (365)
T 4h5i_A 199 LEVISTVTGSC----IARKTDFDKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGIT 273 (365)
T ss_dssp EEEEETTTCCE----EEEECCCCTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEE
T ss_pred EEEEEeccCcc----eeeeecCCCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeE
Confidence 66666665532 1223456788899999999997 6888888887 6889998876521 01345578899999
Q ss_pred EEEeCCCCCc--cCCCCceEEeeeccee--e------eccCeeEEEeecCCCccc
Q 020480 278 VSILNASFRL--SHEDTCTCTHRHSRYL--L------YKFPFFVLVFPLFPSLQH 322 (325)
Q Consensus 278 ~i~~~p~~~~--~~~~d~~~~~~~~~~~--~------~~~~~~~~~~~~~~~~~~ 322 (325)
+++|+|+|++ +++.|+++++|+++.. . ...++.+++| .|+.+.
T Consensus 274 ~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f--Spdg~~ 326 (365)
T 4h5i_A 274 SMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI--SPDSTY 326 (365)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE--CTTSCE
T ss_pred eEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE--CCCCCE
Confidence 9999999995 7899999999997532 1 2345566665 455544
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5.8e-21 Score=173.05 Aligned_cols=162 Identities=15% Similarity=0.081 Sum_probs=135.9
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCC--CCCCCCCCCCCCCCcEEEe--cCCCceEEEEecCCCCCeEEEEe
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYS--KHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~--~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
.|.+.|.+++|+|++..++++|+.||.|++|++. . ...+..+. .|...|++++|+|++. +|++|+
T Consensus 100 ~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~----------~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~ 168 (450)
T 2vdu_B 100 PIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTS----------KNVLKLRKRFCFSKRPNAISIAEDDT-TVIIAD 168 (450)
T ss_dssp CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSS----------SSCEEEEEEEECSSCEEEEEECTTSS-EEEEEE
T ss_pred ccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCC----------CceeeeeecccCCCCceEEEEcCCCC-EEEEEe
Confidence 5777899999999995445999999999999998 4 33455554 6778999999999998 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecC---CCcEEEEEecCCcEEEEEccCCCCCCCeeE-eeccCC
Q 020480 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLR---HEYLFGSVGDDQYLLIWDLRTPSVSKPVQS-VVAHQS 274 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~h~~ 274 (325)
.+|.|++|++....... .+...+.+|...|.+++|+|+ + .+|++|+.|+.|++||++++.. +.. +.+|..
T Consensus 169 ~~g~v~~~~~~~~~~~~--~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~h~~ 242 (450)
T 2vdu_B 169 KFGDVYSIDINSIPEEK--FTQEPILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQCFI---VDKWLFGHKH 242 (450)
T ss_dssp TTSEEEEEETTSCCCSS--CCCCCSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCTTC---EEEECCCCSS
T ss_pred CCCcEEEEecCCccccc--ccceeeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCCce---eeeeecCCCC
Confidence 99999999998764321 033467789999999999998 6 6999999999999999998874 655 568999
Q ss_pred CeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 275 EVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 275 ~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
.|.+++|+ ++.+ +++.|+++++|+++.
T Consensus 243 ~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 243 FVSSICCG-KDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp CEEEEEEC-STTEEEEEESSSEEEEEETTT
T ss_pred ceEEEEEC-CCCEEEEEeCCCeEEEEECCC
Confidence 99999999 8874 889999999999754
No 94
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9.4e-21 Score=165.96 Aligned_cols=203 Identities=12% Similarity=0.126 Sum_probs=159.2
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE
Q 020480 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (325)
Q Consensus 42 ~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (325)
-++.+++|+|++. .++.++.. ..|.+|++. .++ .....
T Consensus 33 ~~v~~~~~s~~~~----------~l~~~~~d-----g~i~vwd~~--------------------------~~~-~~~~~ 70 (369)
T 3zwl_B 33 RPLTQVKYNKEGD----------LLFSCSKD-----SSASVWYSL--------------------------NGE-RLGTL 70 (369)
T ss_dssp SCEEEEEECTTSC----------EEEEEESS-----SCEEEEETT--------------------------TCC-EEEEE
T ss_pred ceEEEEEEcCCCC----------EEEEEeCC-----CEEEEEeCC--------------------------Cch-hhhhh
Confidence 3588999999764 45555532 367787642 112 12234
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d- 200 (325)
..|.+.|.+++|+|++ ++|++++.||.|++||+.. ...+..+. |...+.+++|+|++. .+++++.+
T Consensus 71 ~~h~~~v~~~~~~~~~-~~l~s~~~dg~i~iwd~~~----------~~~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~ 137 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFT-KYCVTGSADYSIKLWDVSN----------GQCVATWK-SPVPVKRVEFSPCGN-YFLAILDNV 137 (369)
T ss_dssp CCCSSCEEEEEECTTS-SEEEEEETTTEEEEEETTT----------CCEEEEEE-CSSCEEEEEECTTSS-EEEEEECCB
T ss_pred hhcCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEee-cCCCeEEEEEccCCC-EEEEecCCc
Confidence 4699999999999988 7999999999999999987 33455555 888999999999998 89999998
Q ss_pred ----CcEEEEeCCCCCCCCcc-----cceEeeecCCc--cEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 201 ----AQICLWDINAAPKNKSL-----EAMQIFKVHEG--VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 201 ----g~i~iwd~~~~~~~~~~-----~~~~~~~~~~~--~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
|.|++||++.......+ .....+..|.. .+.+++|+|++ .++++++.||.|++||+++... .+..+
T Consensus 138 ~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~--~~~~~ 214 (369)
T 3zwl_B 138 MKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYE--YVDSI 214 (369)
T ss_dssp TTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTE--EEEEE
T ss_pred cCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcE--eEEEE
Confidence 99999999876532111 13344555666 89999999987 6899999999999999998432 57788
Q ss_pred eccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 270 VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
..|...|.+++|+|++.+ +++.|+.+++|+++.
T Consensus 215 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~ 249 (369)
T 3zwl_B 215 DLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVST 249 (369)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred ecCCCceeEEEECCCCCEEEEecCCceEEEEECCC
Confidence 889999999999999984 788899999999754
No 95
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=4.6e-22 Score=177.21 Aligned_cols=238 Identities=8% Similarity=0.035 Sum_probs=153.3
Q ss_pred hhHHHHhhhHhcChhH-----HHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCC
Q 020480 16 LINEEYKIWKKNTPFL-----YDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD 90 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~-----y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~ 90 (325)
..|.++|||+.+.+.+ ...+..|... +.+++|.|..... .....+.++.++. +..+++|++.-
T Consensus 108 ~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~--v~~v~~~p~~~~~--~~~d~~~las~s~-----D~tv~~Wd~~~--- 175 (393)
T 4gq1_A 108 CQDNTVRLIITKNETIITQHVLGGKSGHHNF--VNDIDIADVYSAD--NRLAEQVIASVGD-----DCTLIIWRLTD--- 175 (393)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECTTTSCSSC--EEEEEEEEEECTT--CSEEEEEEEEEET-----TSEEEEEEEET---
T ss_pred eCCCcEEEEECCCCccceeeeecccCCCCCc--eEEEEEccccccc--cCCCCCEEEEEEC-----CCeEEEEECCC---
Confidence 3578999999887643 2345566654 8999999953211 1112345544443 45899998851
Q ss_pred CCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCC----
Q 020480 91 DSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG---- 166 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~---- 166 (325)
.-.......|...|.+++|+|++.++|++|+.||.|++||+...........
T Consensus 176 ------------------------~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 176 ------------------------EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp ------------------------TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred ------------------------CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 1234456789999999999998867899999999999999986322111000
Q ss_pred -----------CCCCcEEEecCCCceEEEEec-CCCCCeEEEEeCCCcEEEEeCCCCCCCCccc-------------ceE
Q 020480 167 -----------ACSPDLRLRGHSTEGYGLSWS-KFKEGHLLSGSDDAQICLWDINAAPKNKSLE-------------AMQ 221 (325)
Q Consensus 167 -----------~~~~~~~~~~h~~~v~~l~~~-p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~-------------~~~ 221 (325)
.........+|...+.++.|+ |++. .+++++.|+++++||+..+.....+. ...
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 000112235788899999987 6777 89999999999999998764321110 011
Q ss_pred eeecCCccEEEEEeec-CCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCce
Q 020480 222 IFKVHEGVVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCT 294 (325)
Q Consensus 222 ~~~~~~~~v~~v~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~ 294 (325)
....+...+ ...|+| .+..++++|+.||.|++||+.++.. +.....|..+|++++|+|+|++ +++.++.
T Consensus 311 ~~~~~~~~~-~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~---~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 311 GISLFPSLL-GACPHPRYMDYFATAHSQHGLIQLINTYEKDS---NSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp EECSSCCSS-CCEECSSCTTEEEEEETTTTEEEEEETTCTTC---CEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred cccccCcce-eEEEccCCCCEEEEEECCCCEEEEEECCCCcE---EEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 111112222 223333 3335677888999999999998874 6677788999999999999995 5555554
No 96
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=2.1e-22 Score=195.10 Aligned_cols=221 Identities=15% Similarity=0.245 Sum_probs=176.9
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+..++||+...+.....+..|. -++.+++|+|++. .+++|+. +..|.+|++.
T Consensus 33 ~~g~v~iwd~~~~~~~~~~~~~~--~~v~~~~~s~~~~----------~l~~~~~-----dg~i~vw~~~---------- 85 (814)
T 3mkq_A 33 YSGRVEIWNYETQVEVRSIQVTE--TPVRAGKFIARKN----------WIIVGSD-----DFRIRVFNYN---------- 85 (814)
T ss_dssp TTSEEEEEETTTTEEEEEEECCS--SCEEEEEEEGGGT----------EEEEEET-----TSEEEEEETT----------
T ss_pred CCCEEEEEECCCCceEEEEecCC--CcEEEEEEeCCCC----------EEEEEeC-----CCeEEEEECC----------
Confidence 35679999988877666666555 3589999999874 5666654 3478888652
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.++ .......|.+.|.+++|+|++ .+|++|+.||.|++|++.. + ......+.+
T Consensus 86 ----------------~~~-~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~--------~-~~~~~~~~~ 138 (814)
T 3mkq_A 86 ----------------TGE-KVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWEN--------N-WALEQTFEG 138 (814)
T ss_dssp ----------------TCC-EEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGG--------T-SEEEEEEEC
T ss_pred ----------------CCc-EEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCC--------C-ceEEEEEcC
Confidence 112 122345699999999999998 6899999999999999976 1 234567789
Q ss_pred CCCceEEEEecC-CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeec--CCCcEEEEEecCCcE
Q 020480 177 HSTEGYGLSWSK-FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHL--RHEYLFGSVGDDQYL 252 (325)
Q Consensus 177 h~~~v~~l~~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p--~~~~~l~s~~~dg~i 252 (325)
|...|.+++|+| ++. .+++++.||.|++||++.+.. ...+.. +...+.+++|+| ++ .++++++.||.|
T Consensus 139 ~~~~v~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~------~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i 210 (814)
T 3mkq_A 139 HEHFVMCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTP------NFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTI 210 (814)
T ss_dssp CSSCEEEEEEETTEEE-EEEEEETTSEEEEEETTCSSC------SEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEE
T ss_pred CCCcEEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcc------eeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEE
Confidence 999999999999 666 899999999999999987632 334443 448899999999 76 699999999999
Q ss_pred EEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 253 ~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++||++++. .+..+.+|...|.+++|+|++.+ +++.|+.+++|+...
T Consensus 211 ~~~d~~~~~---~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 211 KIWDYQTKS---CVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp EEEETTTTE---EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred EEEECCCCc---EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 999999877 47888889999999999999974 888899999998754
No 97
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.89 E-value=5.2e-21 Score=168.10 Aligned_cols=218 Identities=15% Similarity=0.095 Sum_probs=142.9
Q ss_pred hhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcc
Q 020480 23 IWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDD 102 (325)
Q Consensus 23 iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~ 102 (325)
||..+.......+..|. -++.+++|+|++. .++.|+. +.+.+|++. +
T Consensus 3 i~s~~~~~~~~~~~~h~--~~V~~v~fs~dg~----------~la~g~~------~~~~iw~~~-~-------------- 49 (355)
T 3vu4_A 3 LGSMITRNPIVPENHVS--NPVTDYEFNQDQS----------CLILSTL------KSFEIYNVH-P-------------- 49 (355)
T ss_dssp ----------------C--CCCCEEEECTTSS----------EEEEECS------SEEEEEEET-T--------------
T ss_pred cccccccCCccccccCC--CceEEEEECCCCC----------EEEEEcC------CEEEEEecC-C--------------
Confidence 34444444333444454 3588999999874 4555543 246677653 1
Q ss_pred cCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceE
Q 020480 103 RSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY 182 (325)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 182 (325)
.+......+ ..+..+.+.+++..++++|+.|+.|++||... ...+..+. |...|.
T Consensus 50 -------------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~----------~~~~~~~~-~~~~v~ 104 (355)
T 3vu4_A 50 -------------VAHIMSQEM-RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVK----------KQDVSRIK-VDAPVK 104 (355)
T ss_dssp -------------EEEEEEEEC-SCCCEEEECTTSSEEEEECSSTTEEEEEETTT----------TEEEEEEE-CSSCEE
T ss_pred -------------cceeeeeec-CCeEEEEEcCCCCEEEEEECCccEEEEEECCC----------CcEEEEEE-CCCceE
Confidence 122222222 25788888887744456788889999999876 23344444 555777
Q ss_pred EEEecCCCC----------------------------------CeEEE--EeCCCcEEEEeCCCCCCC---------Ccc
Q 020480 183 GLSWSKFKE----------------------------------GHLLS--GSDDAQICLWDINAAPKN---------KSL 217 (325)
Q Consensus 183 ~l~~~p~~~----------------------------------~~l~s--~s~dg~i~iwd~~~~~~~---------~~~ 217 (325)
+++|+++.. ..++. |+.||.|++||++.+... ..+
T Consensus 105 ~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~ 184 (355)
T 3vu4_A 105 DLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAI 184 (355)
T ss_dssp EEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC----------------
T ss_pred EEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccccccccccccc
Confidence 777766420 12333 567888888888764310 011
Q ss_pred cc-eEeeecCCccEEEEEeecCCCcEEEEEecCCc-EEEEEccCCCCCCCeeEee-c-cCCCeeEEEeCCCCCc--cCCC
Q 020480 218 EA-MQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY-LLIWDLRTPSVSKPVQSVV-A-HQSEVGVSILNASFRL--SHED 291 (325)
Q Consensus 218 ~~-~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~~~-~-h~~~v~~i~~~p~~~~--~~~~ 291 (325)
.+ +..+.+|...|.+++|+|++ .+||+|+.||+ |++||+++++. +..+. + |...|++++|+|+|.+ +++.
T Consensus 185 ~p~~~~~~~h~~~v~~~~~s~~g-~~l~s~s~d~~~v~iwd~~~~~~---~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~ 260 (355)
T 3vu4_A 185 LGKGVLIKAHTNPIKMVRLNRKS-DMVATCSQDGTIIRVFKTEDGVL---VREFRRGLDRADVVDMKWSTDGSKLAVVSD 260 (355)
T ss_dssp --CCEEECCCSSCEEEEEECTTS-SEEEEEETTCSEEEEEETTTCCE---EEEEECTTCCSCEEEEEECTTSCEEEEEET
T ss_pred CcccEEEEccCCceEEEEECCCC-CEEEEEeCCCCEEEEEECCCCcE---EEEEEcCCCCCcEEEEEECCCCCEEEEEEC
Confidence 12 67788999999999999987 79999999998 99999999884 77776 5 9999999999999985 8899
Q ss_pred CceEEeeecce
Q 020480 292 TCTCTHRHSRY 302 (325)
Q Consensus 292 d~~~~~~~~~~ 302 (325)
|+++++|+++.
T Consensus 261 d~~v~iw~~~~ 271 (355)
T 3vu4_A 261 KWTLHVFEIFN 271 (355)
T ss_dssp TCEEEEEESSC
T ss_pred CCEEEEEEccC
Confidence 99999999854
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.1e-22 Score=183.27 Aligned_cols=232 Identities=14% Similarity=0.164 Sum_probs=166.1
Q ss_pred hHHHHhhhHhcC---hhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCC
Q 020480 17 INEEYKIWKKNT---PFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSE 93 (325)
Q Consensus 17 ~~~~~~iw~~~~---~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~ 93 (325)
.+.++++|+... ...+.........-++.+++|.|+.. .++.++.. ..|.+|++........
T Consensus 84 ~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~----------~l~s~s~d-----g~i~vwd~~~~~~~~~ 148 (437)
T 3gre_A 84 DQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFD----------AFAVSSKD-----GQIIVLKVNHYQQESE 148 (437)
T ss_dssp TTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSS----------EEEEEETT-----SEEEEEEEEEEEETTE
T ss_pred CCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCC----------EEEEEeCC-----CEEEEEEeccccCCce
Confidence 567899999876 33232222222345699999999764 46566542 4799998841100000
Q ss_pred cccCCCCcccCCCCCCCCCCCceEEEEEe---c--cCCCeeEEE--ecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCC
Q 020480 94 NDARHYDDDRSDFGGFGCANGKVQIIQQI---N--HDGEVNRAR--YMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG 166 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--h~~~v~~v~--~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~ 166 (325)
. .......+..+ . +...+.++. +++++ .+|++|+.||.|++||++.
T Consensus 149 ~-----------------~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~--------- 201 (437)
T 3gre_A 149 V-----------------KFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRT--------- 201 (437)
T ss_dssp E-----------------EEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTT---------
T ss_pred e-----------------eccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCC---------
Confidence 0 00011122222 2 667788888 55666 7999999999999999987
Q ss_pred CCCCcEEEec--CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeee-cCCccEEEEEeecC---CC
Q 020480 167 ACSPDLRLRG--HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLR---HE 240 (325)
Q Consensus 167 ~~~~~~~~~~--h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~---~~ 240 (325)
...+..+.+ |...|++++|+|++. +|++|+.||.|++||++.+ .++..+. .|...|.+++|+|. +.
T Consensus 202 -~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~s~~~ 273 (437)
T 3gre_A 202 -LERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFN------VLIRSWSFGDHAPITHVEVCQFYGKNS 273 (437)
T ss_dssp -CCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTT------EEEEEEBCTTCEEEEEEEECTTTCTTE
T ss_pred -CeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCc------cEEEEEecCCCCceEEEEeccccCCCc
Confidence 455777777 889999999999988 8999999999999999976 4566665 77889999977653 23
Q ss_pred cEEEEEecCCcEEEEEccCCCCCCCeeEeec--------------------------cCCCeeEEEeCCCCC--ccCCCC
Q 020480 241 YLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA--------------------------HQSEVGVSILNASFR--LSHEDT 292 (325)
Q Consensus 241 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v~~i~~~p~~~--~~~~~d 292 (325)
.+|++|+.||.|++||+++++. +..+.+ |...|++++|+ ++. ++++.|
T Consensus 274 ~~l~s~~~dg~i~iwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d 349 (437)
T 3gre_A 274 VIVVGGSSKTFLTIWNFVKGHC---QYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEAT 349 (437)
T ss_dssp EEEEEESTTEEEEEEETTTTEE---EEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGG
T ss_pred cEEEEEcCCCcEEEEEcCCCcE---EEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCC
Confidence 6999999999999999998763 444332 56678889999 454 388899
Q ss_pred ceEEeeecce
Q 020480 293 CTCTHRHSRY 302 (325)
Q Consensus 293 ~~~~~~~~~~ 302 (325)
+.+++|++..
T Consensus 350 ~~i~~wd~~~ 359 (437)
T 3gre_A 350 SSIVMFSLNE 359 (437)
T ss_dssp TEEEEEETTC
T ss_pred CeEEEEECCC
Confidence 9999999754
No 99
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.89 E-value=2.7e-22 Score=180.75 Aligned_cols=222 Identities=11% Similarity=0.094 Sum_probs=159.9
Q ss_pred hhHhcChhHHHHhhhcCCCCCceEEEEee-CCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCc
Q 020480 23 IWKKNTPFLYDLVITHALEWPSLTVEWLP-DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDD 101 (325)
Q Consensus 23 iw~~~~~~~y~~~~~~~~~~p~~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~ 101 (325)
.|+.+...+......|.. ++.+++|+| ++. .++.|+. +..|.+|++.-..
T Consensus 47 ~w~~~g~~~~~~~~~h~~--~V~~~~~s~~~~~----------~l~s~s~-----dg~v~vwd~~~~~------------ 97 (437)
T 3gre_A 47 MGNLRGKLIATLMENEPN--SITSSAVSPGETP----------YLITGSD-----QGVIKIWNLKEII------------ 97 (437)
T ss_dssp GGGCCCCEEEEECTTTTS--CEEEEEEECSSSC----------EEEEEET-----TSEEEEEEHHHHH------------
T ss_pred cccccceEEeeeccCCCC--ceEEEEECCCCCC----------EEEEecC-----CceEEEeECcccc------------
Confidence 477655433333255544 489999999 663 5666653 3489999874110
Q ss_pred ccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----
Q 020480 102 DRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----- 176 (325)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----- 176 (325)
. .........+.|.+.|++++|+|++ .+|++|+.||.|++||+.... .......+.+
T Consensus 98 -~---------~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~-------~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 98 -V---------GEVYSSSLTYDCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQ-------QESEVKFLNCECIRK 159 (437)
T ss_dssp -T---------TCCCSCSEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEE-------ETTEEEEEEEEEEEE
T ss_pred -c---------CcccceeeeccCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEecccc-------CCceeeccccceeEE
Confidence 0 0001111234699999999999987 799999999999999985200 0111222221
Q ss_pred -------CCCceEEEE--ecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeec--CCccEEEEEeecCCCcEEEE
Q 020480 177 -------HSTEGYGLS--WSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGS 245 (325)
Q Consensus 177 -------h~~~v~~l~--~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~s 245 (325)
+...+.++. +++++. ++++|+.||.|++||++.+ .++..+.. |...|.+++|+|++ .+|++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~------~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s 231 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTL------ERLQIIENSPRHGAVSSICIDEEC-CVLIL 231 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTC------CEEEEEECCGGGCCEEEEEECTTS-CEEEE
T ss_pred EEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCC------eeeEEEccCCCCCceEEEEECCCC-CEEEE
Confidence 445566666 556777 8999999999999999886 45777777 88999999999986 79999
Q ss_pred EecCCcEEEEEccCCCCCCCeeEee-ccCCCeeEEEeCC----CCCc--cCCCCceEEeeecce
Q 020480 246 VGDDQYLLIWDLRTPSVSKPVQSVV-AHQSEVGVSILNA----SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 246 ~~~dg~i~iwd~~~~~~~~~~~~~~-~h~~~v~~i~~~p----~~~~--~~~~d~~~~~~~~~~ 302 (325)
|+.||.|++||++++. ++..+. .|..+|.+++|+| ++.+ +++.|+++++|+++.
T Consensus 232 ~~~dg~i~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~ 292 (437)
T 3gre_A 232 GTTRGIIDIWDIRFNV---LIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVK 292 (437)
T ss_dssp EETTSCEEEEETTTTE---EEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTT
T ss_pred EcCCCeEEEEEcCCcc---EEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCC
Confidence 9999999999999876 367664 7888999997765 4543 889999999999863
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.88 E-value=9.2e-21 Score=171.73 Aligned_cols=199 Identities=13% Similarity=0.135 Sum_probs=155.9
Q ss_pred CceEEEEeeCCCCCCCCCcceEEE-EEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKM-ILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (325)
++.+++|+|++. .+ +.|.. +..+.+|++..+. ...+..+..
T Consensus 104 ~v~~~~~s~d~~----------~l~~~~~~-----dg~v~iwd~~~~~-----------------------~~~~~~~~~ 145 (450)
T 2vdu_B 104 YIRNLRLTSDES----------RLIACADS-----DKSLLVFDVDKTS-----------------------KNVLKLRKR 145 (450)
T ss_dssp CEEEEEECTTSS----------EEEEEEGG-----GTEEEEEEECSSS-----------------------SSCEEEEEE
T ss_pred ceEEEEEcCCCC----------EEEEEECC-----CCeEEEEECcCCC-----------------------Cceeeeeec
Confidence 488999999875 33 44443 2479999874210 112344444
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCC--CcEEEecCCCceEEEEecCC---CCCeEEE
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS--PDLRLRGHSTEGYGLSWSKF---KEGHLLS 196 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~--~~~~~~~h~~~v~~l~~~p~---~~~~l~s 196 (325)
..|...|++++|+|++ .+|++|+.+|.|++|++... ... ....+.+|...|++++|+|+ +. +|++
T Consensus 146 ~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~~~~~--------~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s 215 (450)
T 2vdu_B 146 FCFSKRPNAISIAEDD-TTVIIADKFGDVYSIDINSI--------PEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIIT 215 (450)
T ss_dssp EECSSCEEEEEECTTS-SEEEEEETTSEEEEEETTSC--------CCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEE
T ss_pred ccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEecCCc--------ccccccceeeecccCceEEEEEcCCCCCCc-EEEE
Confidence 5788999999999998 79999999999999998762 111 33467789999999999999 77 8999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceEe-eecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec----
Q 020480 197 GSDDAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA---- 271 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---- 271 (325)
|+.|+.|++||++.+. .+.. +.+|...|.+++|+ ++ .+|++|+.|+.|++||+++++. +..+..
T Consensus 216 ~~~d~~i~vwd~~~~~------~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~~---~~~~~~~~~~ 284 (450)
T 2vdu_B 216 SDRDEHIKISHYPQCF------IVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGKN---LSTFDYNSLI 284 (450)
T ss_dssp EETTSCEEEEEESCTT------CEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCCE---EEEEECHHHH
T ss_pred EcCCCcEEEEECCCCc------eeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCcE---eeeecchhhh
Confidence 9999999999998763 3444 56899999999999 76 7999999999999999999874 555542
Q ss_pred ---------------------cCCCeeEEEeCCCCCc--cCC-CCceEEeeec
Q 020480 272 ---------------------HQSEVGVSILNASFRL--SHE-DTCTCTHRHS 300 (325)
Q Consensus 272 ---------------------h~~~v~~i~~~p~~~~--~~~-~d~~~~~~~~ 300 (325)
....|.+++|+|++.+ +++ .++.+++|++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 285 KPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp GGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred hhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 2357899999999985 444 7999999998
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.88 E-value=7.9e-21 Score=184.08 Aligned_cols=198 Identities=16% Similarity=0.181 Sum_probs=161.3
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
++.+++|+|++. .+++|.. ++.|.+|++. .+. ......
T Consensus 15 ~v~~i~~sp~~~----------~la~~~~-----~g~v~iwd~~--------------------------~~~-~~~~~~ 52 (814)
T 3mkq_A 15 RVKGIDFHPTEP----------WVLTTLY-----SGRVEIWNYE--------------------------TQV-EVRSIQ 52 (814)
T ss_dssp CEEEEEECSSSS----------EEEEEET-----TSEEEEEETT--------------------------TTE-EEEEEE
T ss_pred ceEEEEECCCCC----------EEEEEeC-----CCEEEEEECC--------------------------CCc-eEEEEe
Confidence 488999999874 5666653 3478888652 111 222344
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
.|.+.|.+++|+|++ .+|++|+.||.|++|++.+ ...+..+.+|...|++++|+|+++ +|++++.||.
T Consensus 53 ~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~----------~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~ 120 (814)
T 3mkq_A 53 VTETPVRAGKFIARK-NWIIVGSDDFRIRVFNYNT----------GEKVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLT 120 (814)
T ss_dssp CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEECSSSS-EEEEEETTSE
T ss_pred cCCCcEEEEEEeCCC-CEEEEEeCCCeEEEEECCC----------CcEEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCE
Confidence 699999999999998 7999999999999999987 355778889999999999999998 8999999999
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-cCCCeeEEEe
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVGVSIL 281 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~i~~ 281 (325)
|++||++.+. .....+.+|...|.+++|+|.+...+++++.||.|++||++.... ...+.. +...+.+++|
T Consensus 121 i~vw~~~~~~-----~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~---~~~~~~~~~~~v~~~~~ 192 (814)
T 3mkq_A 121 VKLWNWENNW-----ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTP---NFTLTTGQERGVNYVDY 192 (814)
T ss_dssp EEEEEGGGTS-----EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSC---SEEEECCCTTCCCEEEE
T ss_pred EEEEECCCCc-----eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---eeEEecCCCCCEEEEEE
Confidence 9999998752 346677889999999999994347999999999999999988774 555544 4489999999
Q ss_pred CC--CCCc--cCCCCceEEeeecce
Q 020480 282 NA--SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 282 ~p--~~~~--~~~~d~~~~~~~~~~ 302 (325)
+| ++.+ +++.|+.+++|+.+.
T Consensus 193 ~~~~~~~~l~~~~~dg~i~~~d~~~ 217 (814)
T 3mkq_A 193 YPLPDKPYMITASDDLTIKIWDYQT 217 (814)
T ss_dssp CCSTTCCEEEEECTTSEEEEEETTT
T ss_pred EECCCCCEEEEEeCCCEEEEEECCC
Confidence 99 7764 888999999998643
No 102
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=6.5e-21 Score=165.72 Aligned_cols=196 Identities=9% Similarity=0.017 Sum_probs=155.6
Q ss_pred CceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe
Q 020480 43 PSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI 122 (325)
Q Consensus 43 p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 122 (325)
++.+++|+|++. .+++++. ++.+.+|++.-. .+........
T Consensus 13 ~v~~~~~s~~~~----------~l~~~~~-----d~~v~iw~~~~~------------------------~~~~~~~~~~ 53 (342)
T 1yfq_A 13 YISDIKIIPSKS----------LLLITSW-----DGSLTVYKFDIQ------------------------AKNVDLLQSL 53 (342)
T ss_dssp CEEEEEEEGGGT----------EEEEEET-----TSEEEEEEEETT------------------------TTEEEEEEEE
T ss_pred cEEEEEEcCCCC----------EEEEEcC-----CCeEEEEEeCCC------------------------Cccccceeee
Confidence 588999999764 4556553 358999988621 1223344556
Q ss_pred ccCCCeeEEEecCCCCc-EEEEEecCCeEEEEeC-CCCCCCCCCCCCCCCcEEEec--CCCceEEEEecCCCCCeEEEEe
Q 020480 123 NHDGEVNRARYMPQNPF-LIATKTVSAEVYVFDY-SKHPSKPPLDGACSPDLRLRG--HSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~-~la~g~~dg~v~vwd~-~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~~p~~~~~l~s~s 198 (325)
.|...|++++|+|++ . +|++|+.||.|++|++ .. .....+.+ |...|.+++|+| +. ++++++
T Consensus 54 ~~~~~v~~~~~~~~~-~~~l~~~~~dg~i~~wd~~~~-----------~~~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~ 119 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNT-DLQIYVGTVQGEILKVDLIGS-----------PSFQALTNNEANLGICRICKYG-DD-KLIAAS 119 (342)
T ss_dssp ECSSCEEEEEEEESS-SEEEEEEETTSCEEEECSSSS-----------SSEEECBSCCCCSCEEEEEEET-TT-EEEEEE
T ss_pred ecCCceEEEEECCCC-CcEEEEEcCCCeEEEEEeccC-----------CceEeccccCCCCceEEEEeCC-CC-EEEEEc
Confidence 899999999999987 7 8999999999999999 76 22466778 999999999999 66 899999
Q ss_pred CCCcEEEEeCCC---------CCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccC-CCCCCCeeE
Q 020480 199 DDAQICLWDINA---------APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQS 268 (325)
Q Consensus 199 ~dg~i~iwd~~~---------~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~ 268 (325)
.|+.|++||++. .. ++..+. |...|.+++|+|++ +++++.|+.|++||++. ... .....
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-~~~~~ 188 (342)
T 1yfq_A 120 WDGLIEVIDPRNYGDGVIAVKNL------NSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-NGTIE 188 (342)
T ss_dssp TTSEEEEECHHHHTTBCEEEEES------CSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-CCEEE
T ss_pred CCCeEEEEcccccccccccccCC------eeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-cceee
Confidence 999999999986 42 333444 88899999999864 88999999999999998 553 12334
Q ss_pred eeccCCCeeEEEeCC-CCCc--cCCCCceEEeeecce
Q 020480 269 VVAHQSEVGVSILNA-SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 269 ~~~h~~~v~~i~~~p-~~~~--~~~~d~~~~~~~~~~ 302 (325)
...|...|.+++|+| ++.+ +++.|+.+++|++..
T Consensus 189 ~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~ 225 (342)
T 1yfq_A 189 ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDD 225 (342)
T ss_dssp ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCT
T ss_pred ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcC
Confidence 456888999999999 8874 788999999987644
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.88 E-value=1.2e-21 Score=176.64 Aligned_cols=159 Identities=21% Similarity=0.261 Sum_probs=132.0
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
...+|...|.+++| ++ +++++|+.||.|++||+.. ...+..+.+|...|.++.|+ +. ++++|+.
T Consensus 251 ~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~----------~~~~~~~~~~~~~v~~~~~~--~~-~l~~g~~ 314 (435)
T 1p22_A 251 VLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTST----------CEFVRTLNGHKRGIACLQYR--DR-LVVSGSS 314 (435)
T ss_dssp EECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTT----------CCEEEEEECCSSCEEEEEEE--TT-EEEEEET
T ss_pred EecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCc----------CcEEEEEcCCCCcEEEEEeC--CC-EEEEEeC
Confidence 35579999999999 34 6899999999999999987 45577889999999999995 44 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC------CCeeEeeccC
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS------KPVQSVVAHQ 273 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~------~~~~~~~~h~ 273 (325)
||.|++||++++ .++..+.+|...|.+++| ++ .++++|+.||.|++||++..... ..+..+.+|.
T Consensus 315 dg~i~iwd~~~~------~~~~~~~~h~~~v~~~~~--~~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~ 385 (435)
T 1p22_A 315 DNTIRLWDIECG------ACLRVLEGHEELVRCIRF--DN-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHS 385 (435)
T ss_dssp TSCEEEEETTTC------CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCS
T ss_pred CCeEEEEECCCC------CEEEEEeCCcCcEEEEEe--cC-CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCC
Confidence 999999999987 567888999999999999 33 68999999999999999865411 1367778999
Q ss_pred CCeeEEEeCCCCCccCCCCceEEeeeccee
Q 020480 274 SEVGVSILNASFRLSHEDTCTCTHRHSRYL 303 (325)
Q Consensus 274 ~~v~~i~~~p~~~~~~~~d~~~~~~~~~~~ 303 (325)
+.|.+++|++...++++.|+++++|++...
T Consensus 386 ~~v~~l~~~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 386 GRVFRLQFDEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp SCCCCEEECSSCEEECCSSSEEEEEC----
T ss_pred CCeEEEEeCCCEEEEEeCCCEEEEEECCCC
Confidence 999999996554459999999999997653
No 104
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.4e-21 Score=174.78 Aligned_cols=152 Identities=11% Similarity=0.109 Sum_probs=122.0
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCC-C----CcEEE----ecCCCceEEEEecCCCCCeEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGAC-S----PDLRL----RGHSTEGYGLSWSKFKEGHLLSG 197 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~-~----~~~~~----~~h~~~v~~l~~~p~~~~~l~s~ 197 (325)
.|.+++|+|+| ++||+|+.||+|++|++.. +.. . .+.++ .+|...|.+++|+|++ ++++
T Consensus 131 sv~svafSPDG-~~LAsgs~DGtVkIWd~~~--------~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laas 198 (588)
T 2j04_A 131 TYHCFEWNPIE-SSIVVGNEDGELQFFSIRK--------NSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAA 198 (588)
T ss_dssp CEEEEEECSSS-SCEEEEETTSEEEEEECCC--------CTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEE
T ss_pred cEEEEEEcCCC-CEEEEEcCCCEEEEEECCC--------CccccccceeeeeeecccccccccEEEEEEcCCc---EEEE
Confidence 59999999999 7999999999999999987 211 1 24565 5788899999999987 8889
Q ss_pred eCCCcEEEEeCCCCCCCCcccceEee-ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCe
Q 020480 198 SDDAQICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (325)
Q Consensus 198 s~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 276 (325)
+.|++|++||+...... ...+.+ .+|...|.+++|+ + ..+|+++ ++.|++||+..+.. .....+|.+.|
T Consensus 199 s~D~tVrlWd~~~~~~~---~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~---~~~~~gh~~~V 268 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQ---PVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSI---SSLKTGSLENF 268 (588)
T ss_dssp ETTCCEEEECCCSSSSC---CCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEE---EEEECSCCSCC
T ss_pred eCCCeEEEEECCCCccc---cceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeE---EEEEcCCCceE
Confidence 99999999999876421 123445 4788899999999 4 6888887 69999999998762 23333899999
Q ss_pred eEEEe--CCCCCc--cCCCCceEEeeecc
Q 020480 277 GVSIL--NASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 277 ~~i~~--~p~~~~--~~~~d~~~~~~~~~ 301 (325)
.+++| +|++.. +++.+++ ++|...
T Consensus 269 ~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 269 HIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp CEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred EEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 99999 999963 7777888 888764
No 105
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=3e-21 Score=180.91 Aligned_cols=224 Identities=10% Similarity=0.043 Sum_probs=175.5
Q ss_pred HHHHhhhHhcCh----hHHHHhhhcCCCCC-ceEEEEee--CCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCC
Q 020480 18 NEEYKIWKKNTP----FLYDLVITHALEWP-SLTVEWLP--DREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLD 90 (325)
Q Consensus 18 ~~~~~iw~~~~~----~~y~~~~~~~~~~p-~~s~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~ 90 (325)
+..+++|+...+ .....+..|. -+ +.+++|+| ++. .++.|.. +..+.+|++.-..
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~--~~~v~~~~~sp~~~~~----------~l~s~~~-----dg~v~vw~~~~~~- 99 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHG--SSVVTTVKFSPIKGSQ----------YLCSGDE-----SGKVIVWGWTFDK- 99 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTT--TSCEEEEEECSSTTCC----------EEEEEET-----TSEEEEEEEEEEG-
T ss_pred CCeEEEEECCCCCCccccceEEecCC--CceEEEEEECcCCCCC----------EEEEecC-----CCEEEEEeCCCCc-
Confidence 457889998876 5555555554 45 88999999 763 5656554 3489999884110
Q ss_pred CCCcccCCCCcccCCCCCCCCCCCceEEE-EEeccCCCeeEEEecCCCCcEEEEEecC----CeEEEEeCCCCCCCCCCC
Q 020480 91 DSENDARHYDDDRSDFGGFGCANGKVQII-QQINHDGEVNRARYMPQNPFLIATKTVS----AEVYVFDYSKHPSKPPLD 165 (325)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~v~~~~~~~~~la~g~~d----g~v~vwd~~~~~~~~~~~ 165 (325)
. . ........ ....|...|.+++|+|++ .+|++++.+ +.|++|+..
T Consensus 100 -------~--~----------~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d~~--------- 150 (615)
T 1pgu_A 100 -------E--S----------NSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWDSG--------- 150 (615)
T ss_dssp -------G--G----------TEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETTTC---------
T ss_pred -------c--c----------ccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEECC---------
Confidence 0 0 00012222 334589999999999998 688888877 789999832
Q ss_pred CCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCc---cEEEEEeecC-CCc
Q 020480 166 GACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEG---VVEDVAWHLR-HEY 241 (325)
Q Consensus 166 ~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~---~v~~v~~~p~-~~~ 241 (325)
..+..+.+|...|.+++|+|++..++++++.|+.|++||+... ..+..+.+|.. .|.+++|+|+ + .
T Consensus 151 ---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 220 (615)
T 1pgu_A 151 ---NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPF------KFSASDRTHHKQGSFVRDVEFSPDSG-E 220 (615)
T ss_dssp ---CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTB------EEEEEECSSSCTTCCEEEEEECSTTC-C
T ss_pred ---CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc------ceeeeecccCCCCceEEEEEECCCCC-C
Confidence 3467788999999999999999868999999999999998876 56777888998 9999999998 6 6
Q ss_pred EEEEEecCCcEEEEEccCCCCCCCeeEe-e---ccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSV-V---AHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 242 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~---~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++++++.||.|++||+++++. +..+ . .|...|.+++|+ ++.+ +++.|+.+++|+++.
T Consensus 221 ~l~~~~~dg~i~vwd~~~~~~---~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~ 283 (615)
T 1pgu_A 221 FVITVGSDRKISCFDGKSGEF---LKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTT 283 (615)
T ss_dssp EEEEEETTCCEEEEETTTCCE---EEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTT
T ss_pred EEEEEeCCCeEEEEECCCCCE---eEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCC
Confidence 999999999999999998873 7777 5 899999999999 7774 788899999999763
No 106
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=4.1e-21 Score=194.30 Aligned_cols=162 Identities=18% Similarity=0.247 Sum_probs=146.1
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
...+|.+.|++++|+|++ .++|+|+.||.|++||+.+ ...+..+.+|...|.+++|+|++. ++++|+.
T Consensus 610 ~~~~h~~~v~~~~~s~~~-~~l~s~~~d~~i~vw~~~~----------~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~ 677 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDG-QRIASCGADKTLQVFKAET----------GEKLLDIKAHEDEVLCCAFSSDDS-YIATCSA 677 (1249)
T ss_dssp EECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------CCEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred EEecccccEEEEEECCCC-CEEEEEeCCCeEEEEECCC----------CCEEEEeccCCCCEEEEEEecCCC-EEEEEeC
Confidence 456799999999999998 7999999999999999987 355778899999999999999998 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCC-CcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRH-EYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV 278 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 278 (325)
||.|++||+.++ .++..+.+|...|.+++|+|++ ..++++|+.||.|++||++++.. +..+.+|...|++
T Consensus 678 d~~v~vwd~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~---~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 678 DKKVKIWDSATG------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC---RNTMFGHTNSVNH 748 (1249)
T ss_dssp TSEEEEEETTTC------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE---EEEECCCSSCEEE
T ss_pred CCeEEEEECCCC------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch---hheecCCCCCEEE
Confidence 999999999987 5678889999999999999952 36899999999999999999884 7888899999999
Q ss_pred EEeCCCCCc--cCCCCceEEeeecce
Q 020480 279 SILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 279 i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
++|+|++.+ +++.|+++++|+++.
T Consensus 749 ~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 749 CRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp EEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred EEEecCCCEEEEEECCCeEEEEeCCC
Confidence 999999984 889999999999754
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=4e-21 Score=168.27 Aligned_cols=124 Identities=15% Similarity=0.267 Sum_probs=105.6
Q ss_pred EeccCCCeeEEEecCCC--CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 121 QINHDGEVNRARYMPQN--PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~--~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
..+|.+.|++++|+|++ +.+|++|+.||.|++|++.. ........+.+|...|++++|+|++. +|++++
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~--------~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~s~~ 105 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQD--------SGQTIPKAQQMHTGPVLDVCWSDDGS-KVFTAS 105 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECT--------TSCEEEEEEEECSSCEEEEEECTTSS-EEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCC--------CCceeEEEeccccCCEEEEEECcCCC-EEEEEc
Confidence 34799999999999984 47999999999999999975 12233367889999999999999988 899999
Q ss_pred CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEe--ecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 199 DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAW--HLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~--~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
.||.|++||++.+. ......|...|.+++| +|++ .+|++++.||.|++||+++.+
T Consensus 106 ~dg~v~iwd~~~~~-------~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 106 CDKTAKMWDLSSNQ-------AIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp TTSEEEEEETTTTE-------EEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSS
T ss_pred CCCcEEEEEcCCCC-------ceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCc
Confidence 99999999998762 2335679999999999 7775 689999999999999998765
No 108
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.87 E-value=3.9e-21 Score=174.54 Aligned_cols=241 Identities=14% Similarity=0.159 Sum_probs=173.3
Q ss_pred hhHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcc
Q 020480 16 LINEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSEND 95 (325)
Q Consensus 16 ~~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~ 95 (325)
..+.++++|+.+++.....+..|.. ++.+++|.|.... ..++.|+.. ..+.+|++.-........
T Consensus 180 s~dg~i~vwd~~~~~~~~~~~~h~~--~v~~l~~~~~~~~--------~~l~s~s~d-----~~i~vwd~~~~~~~~~~~ 244 (464)
T 3v7d_B 180 STDRTVRVWDIKKGCCTHVFEGHNS--TVRCLDIVEYKNI--------KYIVTGSRD-----NTLHVWKLPKESSVPDHG 244 (464)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEEESSSC--------EEEEEEETT-----SCEEEEECCCCCCC----
T ss_pred eCCCCEEEEECCCCcEEEEECCCCC--ccEEEEEecCCCC--------CEEEEEcCC-----CcEEEeeCCCCccccccc
Confidence 4577899999988776666655554 4778888875432 356666543 378888774221110000
Q ss_pred cCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 96 ARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
... . ...................+|...|.++. +++ .++++|+.||.|++||+.. ...+..+.
T Consensus 245 ~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~----------~~~~~~~~ 307 (464)
T 3v7d_B 245 EEH--D--YPLVFHTPEENPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQ----------MKCLYILS 307 (464)
T ss_dssp --C--C--SSEEESCGGGCTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTT----------TEEEEEEC
T ss_pred ccC--C--cceEeeccCCCeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCC----------CcEEEEec
Confidence 000 0 00000000111222334567889998874 445 6999999999999999987 45577888
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
+|...|.+++|+|++. .+++|+.||.|++||++++ .++..+.+|...|.+++|++ .++++|+.||.|++|
T Consensus 308 ~~~~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 308 GHTDRIYSTIYDHERK-RCISASMDTTIRIWDLENG------ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGW 377 (464)
T ss_dssp CCSSCEEEEEEETTTT-EEEEEETTSCEEEEETTTT------EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEE
T ss_pred CCCCCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC------cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEE
Confidence 9999999999999998 8999999999999999887 56888899999999999973 589999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
|+++... .... .|...+..++|+|++.+ .++.|+.+++|++..
T Consensus 378 d~~~~~~---~~~~-~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~ 421 (464)
T 3v7d_B 378 DANDYSR---KFSY-HHTNLSAITTFYVSDNILVSGSENQFNIYNLRS 421 (464)
T ss_dssp ETTTCCE---EEEE-ECTTCCCEEEEEECSSEEEEEETTEEEEEETTT
T ss_pred ECCCCce---eeee-cCCCCccEEEEEeCCCEEEEecCCeEEEEECCC
Confidence 9998763 3333 46778888999999885 333489999998754
No 109
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.87 E-value=2.8e-21 Score=195.49 Aligned_cols=226 Identities=16% Similarity=0.178 Sum_probs=178.3
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+..+......+..|.. ++.+++|+|++. .++.++. ++.+.+|++.
T Consensus 635 ~d~~i~vw~~~~~~~~~~~~~h~~--~v~~~~~s~~~~----------~l~s~~~-----d~~v~vwd~~---------- 687 (1249)
T 3sfz_A 635 ADKTLQVFKAETGEKLLDIKAHED--EVLCCAFSSDDS----------YIATCSA-----DKKVKIWDSA---------- 687 (1249)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSS----------EEEEEET-----TSEEEEEETT----------
T ss_pred CCCeEEEEECCCCCEEEEeccCCC--CEEEEEEecCCC----------EEEEEeC-----CCeEEEEECC----------
Confidence 567899999988776666665654 489999999874 4555553 3478888752
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCC-CcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQN-PFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
.++. ......|.+.|.+++|+|++ ..++++|+.||.|++||+.. ......+.
T Consensus 688 ----------------~~~~-~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~----------~~~~~~~~ 740 (1249)
T 3sfz_A 688 ----------------TGKL-VHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ----------KECRNTMF 740 (1249)
T ss_dssp ----------------TCCE-EEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS----------SSEEEEEC
T ss_pred ----------------CCce-EEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC----------cchhheec
Confidence 1222 22345799999999999953 35899999999999999987 34567788
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcc--------------------------------------
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSL-------------------------------------- 217 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~-------------------------------------- 217 (325)
+|...|.+++|+|++. .+++|+.||.|++||++.+.....+
T Consensus 741 ~h~~~v~~~~~sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~ 819 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN 819 (1249)
T ss_dssp CCSSCEEEEEECSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT
T ss_pred CCCCCEEEEEEecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC
Confidence 9999999999999998 8999999999999998765211000
Q ss_pred ----------cceEe-eecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC
Q 020480 218 ----------EAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 218 ----------~~~~~-~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~ 286 (325)
..... ..+|...|.+++|+|++ .++++++.||.|++||+.++. .+..+.+|...|.+++|+|+|.
T Consensus 820 ~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~~~---~~~~~~~h~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 820 KVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRL---KVADCRGHLSWVHGVMFSPDGS 895 (1249)
T ss_dssp EEEEEETTTCCEEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTTTE---EEEEECCCSSCEEEEEECTTSS
T ss_pred cEEEEEecCCCceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCc---eeeecCCCccceEEEEECCCCC
Confidence 00111 12678899999999987 699999999999999999887 4888899999999999999998
Q ss_pred c--cCCCCceEEeeecc
Q 020480 287 L--SHEDTCTCTHRHSR 301 (325)
Q Consensus 287 ~--~~~~d~~~~~~~~~ 301 (325)
. +++.|+++++|+..
T Consensus 896 ~l~s~s~dg~v~vw~~~ 912 (1249)
T 3sfz_A 896 SFLTASDDQTIRVWETK 912 (1249)
T ss_dssp EEEEEETTSCEEEEEHH
T ss_pred EEEEEeCCCeEEEEEcc
Confidence 4 88999999999865
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.87 E-value=6.9e-20 Score=164.49 Aligned_cols=174 Identities=19% Similarity=0.223 Sum_probs=143.3
Q ss_pred CCCCCCceEE-EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEec
Q 020480 109 FGCANGKVQI-IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS 187 (325)
Q Consensus 109 ~~~~~~~~~~-~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~ 187 (325)
|+...+++.. .....|...|++|+|+|+| ++||+|+.||.|++||+.. .+.+..+.+|...+.+++|+
T Consensus 130 Wd~~tg~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~----------~~~~~~~~~h~~~v~~~s~~ 198 (420)
T 4gga_A 130 WSASSGDILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWN 198 (420)
T ss_dssp EETTTCCEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT----------TEEEEEECCCSSCEEEEEEE
T ss_pred EECCCCCEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCC----------CcEEEEEeCCCCceEEEeeC
Confidence 3334454433 3334688999999999998 7999999999999999987 45577889999999999986
Q ss_pred CCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC-CCe
Q 020480 188 KFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPV 266 (325)
Q Consensus 188 p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~ 266 (325)
+ . ++++|+.|+.+++||.+... ..+..+.+|...+..+.|+|++ .++++++.|+.+++||.+.++.. ..+
T Consensus 199 ~--~-~l~sgs~d~~i~~~d~~~~~-----~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~ 269 (420)
T 4gga_A 199 S--Y-ILSSGSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPL 269 (420)
T ss_dssp T--T-EEEEEETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCS
T ss_pred C--C-EEEEEeCCCceeEeeecccc-----eeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceee
Confidence 4 4 89999999999999998754 3467788999999999999987 69999999999999999876532 245
Q ss_pred eEeeccCCCeeEEEeCCCCCc-----cCCCCceEEeeecce
Q 020480 267 QSVVAHQSEVGVSILNASFRL-----SHEDTCTCTHRHSRY 302 (325)
Q Consensus 267 ~~~~~h~~~v~~i~~~p~~~~-----~~~~d~~~~~~~~~~ 302 (325)
.....|...|.+++|+|.+.- .++.|+++++|+++.
T Consensus 270 ~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t 310 (420)
T 4gga_A 270 QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 310 (420)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT
T ss_pred eeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc
Confidence 667789999999999997662 467899999998743
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.87 E-value=5.6e-21 Score=172.34 Aligned_cols=214 Identities=18% Similarity=0.241 Sum_probs=167.5
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.++..+...+..|.. ++.+++| +. ..++.|+.. ..|.+|++.
T Consensus 151 ~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~--~~----------~~l~sg~~d-----g~i~vwd~~---------- 201 (435)
T 1p22_A 151 RDNTIKIWDKNTLECKRILTGHTG--SVLCLQY--DE----------RVIITGSSD-----STVRVWDVN---------- 201 (435)
T ss_dssp SSSCEEEEESSSCCEEEEECCCSS--CEEEEEC--CS----------SEEEEEETT-----SCEEEEESS----------
T ss_pred CCCeEEEEeCCCCeEEEEEcCCCC--cEEEEEE--CC----------CEEEEEcCC-----CeEEEEECC----------
Confidence 467899999888776666666654 4777777 22 246666543 368888653
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCC-CCcEEEe
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGAC-SPDLRLR 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~-~~~~~~~ 175 (325)
.++. ......|.+.|.+++|++ ..+++|+.||.|++||+.. +.. .....+.
T Consensus 202 ----------------~~~~-~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~--------~~~~~~~~~~~ 253 (435)
T 1p22_A 202 ----------------TGEM-LNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMAS--------PTDITLRRVLV 253 (435)
T ss_dssp ----------------SCCE-EEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSS--------SSCCEEEEEEC
T ss_pred ----------------CCcE-EEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCC--------CCCceeeeEec
Confidence 1222 223457999999999975 5899999999999999986 211 1125677
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
+|...|.+++| ++. .+++|+.||.|++||++++ .++..+.+|...|.+++|+ + .++++|+.||.|++|
T Consensus 254 ~~~~~v~~~~~--~~~-~l~s~~~dg~i~vwd~~~~------~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iw 321 (435)
T 1p22_A 254 GHRAAVNVVDF--DDK-YIVSASGDRTIKVWNTSTC------EFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLW 321 (435)
T ss_dssp CCSSCEEEEEE--ETT-EEEEEETTSEEEEEETTTC------CEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEE
T ss_pred CCCCcEEEEEe--CCC-EEEEEeCCCeEEEEECCcC------cEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEE
Confidence 99999999999 455 8999999999999999987 4678889999999999995 3 589999999999999
Q ss_pred EccCCCCCCCeeEeeccCCCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 256 DLRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
|+++++ .+..+.+|...|.+++|++...++++.|+.+++|+++.
T Consensus 322 d~~~~~---~~~~~~~h~~~v~~~~~~~~~l~sg~~dg~i~vwd~~~ 365 (435)
T 1p22_A 322 DIECGA---CLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVA 365 (435)
T ss_dssp ETTTCC---EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEEHHH
T ss_pred ECCCCC---EEEEEeCCcCcEEEEEecCCEEEEEeCCCcEEEEECCC
Confidence 999987 48888999999999999554445899999999999754
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.87 E-value=6.7e-21 Score=178.51 Aligned_cols=206 Identities=10% Similarity=0.088 Sum_probs=160.9
Q ss_pred CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEE
Q 020480 42 WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQ 121 (325)
Q Consensus 42 ~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (325)
-.+.+++|+|++. .++++. .+.+.+|++.-+ ..+.-.....
T Consensus 19 ~~v~~~~~spdg~----------~l~~~~------~~~v~v~~~~~~-----------------------~~~~~~~~~~ 59 (615)
T 1pgu_A 19 NFTTHLSYDPTTN----------AIAYPC------GKSAFVRCLDDG-----------------------DSKVPPVVQF 59 (615)
T ss_dssp TCCCCCEEETTTT----------EEEEEE------TTEEEEEECCSS-----------------------CCSSCSEEEE
T ss_pred CceeEEEECCCCC----------EEEEec------CCeEEEEECCCC-----------------------CCccccceEE
Confidence 3477899999875 466665 247888876311 0000112234
Q ss_pred eccCCC-eeEEEecC--CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 122 INHDGE-VNRARYMP--QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 122 ~~h~~~-v~~v~~~~--~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
.+|.+. |++++|+| ++ .+||+|+.||.|++|++....... .........+..|...|.+++|+|++. +|++++
T Consensus 60 ~~h~~~~v~~~~~sp~~~~-~~l~s~~~dg~v~vw~~~~~~~~~--~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~ 135 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGS-QYLCSGDESGKVIVWGWTFDKESN--SVEVNVKSEFQVLAGPISDISWDFEGR-RLCVVG 135 (615)
T ss_dssp CTTTTSCEEEEEECSSTTC-CEEEEEETTSEEEEEEEEEEGGGT--EEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEE
T ss_pred ecCCCceEEEEEECcCCCC-CEEEEecCCCEEEEEeCCCCcccc--cccccccchhhcccccEEEEEEeCCCC-EEEEec
Confidence 679999 99999999 88 799999999999999996400000 001244667788999999999999998 899998
Q ss_pred CC----CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 199 DD----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 199 ~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
.+ +.|++||.. ..+..+.+|...|.+++|+|++..++++++.|+.|++||+++.+ .+..+.+|..
T Consensus 136 ~~~~~~~~v~~~d~~--------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~---~~~~~~~~~~ 204 (615)
T 1pgu_A 136 EGRDNFGVFISWDSG--------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK---FSASDRTHHK 204 (615)
T ss_dssp CCSSCSEEEEETTTC--------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE---EEEEECSSSC
T ss_pred cCCCCccEEEEEECC--------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc---eeeeecccCC
Confidence 87 789999833 35777889999999999999986689999999999999998877 4788888998
Q ss_pred ---CeeEEEeCCC-CCc--cCCCCceEEeeecc
Q 020480 275 ---EVGVSILNAS-FRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 275 ---~v~~i~~~p~-~~~--~~~~d~~~~~~~~~ 301 (325)
.|.+++|+|+ +.+ +++.|+.+++|+++
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 237 (615)
T 1pgu_A 205 QGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK 237 (615)
T ss_dssp TTCCEEEEEECSTTCCEEEEEETTCCEEEEETT
T ss_pred CCceEEEEEECCCCCCEEEEEeCCCeEEEEECC
Confidence 9999999999 874 78889999999864
No 113
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.9e-20 Score=162.42 Aligned_cols=163 Identities=8% Similarity=-0.001 Sum_probs=124.6
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecC--CCCCeEEEEeCCC
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSK--FKEGHLLSGSDDA 201 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p--~~~~~l~s~s~dg 201 (325)
...|.++.|+|. +++|+.|+.|++|+......... ......+..+. +|...|.+++|+| ++. ++++|+.||
T Consensus 76 ~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg 149 (343)
T 3lrv_A 76 TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITILD-SKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRG 149 (343)
T ss_dssp EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEEEE-TTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTC
T ss_pred cCCceeeeeCCc----eEEecCCCeEEEEEccCceEEee-cCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCC
Confidence 456778888885 99999999999998764100000 00112133333 6778999999999 888 899999999
Q ss_pred cEEEEeCCCCCCCCcccceEee-ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-cCCCeeEE
Q 020480 202 QICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVGVS 279 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~i 279 (325)
.|++||++.+. +.... ..+...+.+++|+|++ .+|++|+.||.|++||+++++. ....+.. |..+|+++
T Consensus 150 ~i~~wd~~~~~------~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~--~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 150 TIGFQSYEDDS------QYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQ--ASSRFPVDEEAKIKEV 220 (343)
T ss_dssp CEEEEESSSSC------EEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTS--CCEECCCCTTSCEEEE
T ss_pred cEEEEECCCCc------EEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCC--CccEEeccCCCCEEEE
Confidence 99999999763 33333 3455679999999987 6999999999999999999885 2267777 99999999
Q ss_pred EeCCCCCc--cCCCCceEEeeeccee
Q 020480 280 ILNASFRL--SHEDTCTCTHRHSRYL 303 (325)
Q Consensus 280 ~~~p~~~~--~~~~d~~~~~~~~~~~ 303 (325)
+|+|+|.+ +++ ++++++|+++..
T Consensus 221 ~fs~~g~~l~s~~-~~~v~iwd~~~~ 245 (343)
T 3lrv_A 221 KFADNGYWMVVEC-DQTVVCFDLRKD 245 (343)
T ss_dssp EECTTSSEEEEEE-SSBEEEEETTSS
T ss_pred EEeCCCCEEEEEe-CCeEEEEEcCCC
Confidence 99999985 555 559999998765
No 114
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.85 E-value=4.3e-19 Score=152.05 Aligned_cols=200 Identities=15% Similarity=0.090 Sum_probs=156.5
Q ss_pred HhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCC
Q 020480 34 LVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCAN 113 (325)
Q Consensus 34 ~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (325)
.+..|.. ++.+++| |+.. .++.|+. ++.+.+|++. .
T Consensus 13 ~l~~h~~--~v~~~~~-~~~~----------~l~s~~~-----dg~v~vw~~~--------------------------~ 48 (313)
T 3odt_A 13 TLKGHDQ--DVRDVVA-VDDS----------KVASVSR-----DGTVRLWSKD--------------------------D 48 (313)
T ss_dssp EECCCSS--CEEEEEE-EETT----------EEEEEET-----TSEEEEEEES--------------------------S
T ss_pred HhhCCCC--CcEEEEe-cCCC----------EEEEEEc-----CCcEEEEECC--------------------------C
Confidence 4445544 4888888 7653 4666654 3489999873 1
Q ss_pred CceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCe
Q 020480 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 114 ~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 193 (325)
+. .......|.+.|.+++|+|++ .++++|+.||.|++|++... ....+...+.+|...|.+++|. +. .
T Consensus 49 ~~-~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~-------~~~~~~~~~~~~~~~i~~~~~~--~~-~ 116 (313)
T 3odt_A 49 QW-LGTVVYTGQGFLNSVCYDSEK-ELLLFGGKDTMINGVPLFAT-------SGEDPLYTLIGHQGNVCSLSFQ--DG-V 116 (313)
T ss_dssp SE-EEEEEEECSSCEEEEEEETTT-TEEEEEETTSCEEEEETTCC-------TTSCC-CEECCCSSCEEEEEEE--TT-E
T ss_pred CE-EEEEeecCCccEEEEEECCCC-CEEEEecCCCeEEEEEeeec-------CCCCcccchhhcccCEEEEEec--CC-E
Confidence 11 223355789999999999988 79999999999999999762 1234567788999999999994 44 8
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-c
Q 020480 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-H 272 (325)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h 272 (325)
+++++.||.|++||. . .....+..|...+.+++|+|....++++++.||.|++||.. . .+..+.. |
T Consensus 117 l~~~~~d~~i~~~d~--~------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~---~~~~~~~~~ 183 (313)
T 3odt_A 117 VISGSWDKTAKVWKE--G------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--K---VIKTFSGIH 183 (313)
T ss_dssp EEEEETTSEEEEEET--T------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--E---EEEEECSSC
T ss_pred EEEEeCCCCEEEEcC--C------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--c---eEEEEeccC
Confidence 999999999999992 2 45777888999999999999445799999999999999932 2 3566655 8
Q ss_pred CCCeeEEEeCCCCCc-cCCCCceEEeeecce
Q 020480 273 QSEVGVSILNASFRL-SHEDTCTCTHRHSRY 302 (325)
Q Consensus 273 ~~~v~~i~~~p~~~~-~~~~d~~~~~~~~~~ 302 (325)
...|.+++|+|++.+ +++.|+.+++|+++.
T Consensus 184 ~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~ 214 (313)
T 3odt_A 184 NDVVRHLAVVDDGHFISCSNDGLIKLVDMHT 214 (313)
T ss_dssp SSCEEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred cccEEEEEEcCCCeEEEccCCCeEEEEECCc
Confidence 999999999999886 888999999999763
No 115
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.85 E-value=1.3e-20 Score=163.76 Aligned_cols=158 Identities=9% Similarity=0.009 Sum_probs=134.3
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC-CCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
+|.+.|++++|+|++ .+|++|+.||.|++|++.. +. ..+...+.+|...|.+++|+|++..+|++|+.||
T Consensus 9 ~h~~~v~~~~~s~~~-~~l~~~~~d~~v~iw~~~~--------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 79 (342)
T 1yfq_A 9 APKDYISDIKIIPSK-SLLLITSWDGSLTVYKFDI--------QAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp CCSSCEEEEEEEGGG-TEEEEEETTSEEEEEEEET--------TTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTS
T ss_pred CCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEeCC--------CCccccceeeeecCCceEEEEECCCCCcEEEEEcCCC
Confidence 699999999999988 6999999999999999986 11 1124556689999999999998642699999999
Q ss_pred cEEEEeC-CCCCCCCcccceEeeec--CCccEEEEEeecCCCcEEEEEecCCcEEEEEccC---------CCCCCCeeEe
Q 020480 202 QICLWDI-NAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT---------PSVSKPVQSV 269 (325)
Q Consensus 202 ~i~iwd~-~~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~ 269 (325)
.|++||+ ..+ ....+.+ |...|.+++|+| + .++++++.|+.|++||+++ .+. +..+
T Consensus 80 ~i~~wd~~~~~-------~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~ 147 (342)
T 1yfq_A 80 EILKVDLIGSP-------SFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNLN---SNNT 147 (342)
T ss_dssp CEEEECSSSSS-------SEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEESC---SSSS
T ss_pred eEEEEEeccCC-------ceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCCe---eeEE
Confidence 9999999 765 2456777 999999999999 5 6999999999999999997 553 5555
Q ss_pred eccCCCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 270 VAHQSEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
. |...|.+++|+|++.++++.++.+++|+++.
T Consensus 148 ~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 148 K-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPL 179 (342)
T ss_dssp S-SCCCEEEEEECSSEEEEEESTTEEEEEESSC
T ss_pred e-eCCceEEEEecCCcEEEEeCCCeEEEEECCc
Confidence 5 8899999999999966899999999999876
No 116
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.7e-20 Score=181.07 Aligned_cols=164 Identities=10% Similarity=0.028 Sum_probs=133.8
Q ss_pred ceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 115 KVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
.+......+|.+.|++++|+|++ .+||+|+.||.|++|+... ..... ...|...|.+++|+| +. +|
T Consensus 7 ~~~~~~~~gh~~~V~~lafspdg-~~lAsgs~Dg~I~lw~~~~----------~~~~~-~~~~~~~V~~l~fsp-g~-~L 72 (902)
T 2oaj_A 7 SLAETNKYGMSSKPIAAAFDFTQ-NLLAIATVTGEVHIYGQQQ----------VEVVI-KLEDRSAIKEMRFVK-GI-YL 72 (902)
T ss_dssp EEEEEEEEECSSCEEEEEEETTT-TEEEEEETTSEEEEECSTT----------CEEEE-ECSSCCCEEEEEEET-TT-EE
T ss_pred eeccccccCCCCCcEEEEECCCC-CEEEEEeCCCEEEEEeCCC----------cEEEE-EcCCCCCEEEEEEcC-CC-EE
Confidence 34555677899999999999998 7999999999999999865 22222 235788999999999 76 89
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCe--------
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV-------- 266 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-------- 266 (325)
++++.|++|++||++++ .++..+. |...|++++|+|++ .++++|+.||.|++||+++.... +.
T Consensus 73 ~S~s~D~~v~lWd~~~~------~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~ 143 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQ------KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKS 143 (902)
T ss_dssp EEEETTCEEEEEETTTC------SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEE-EEEECCHHHH
T ss_pred EEEECcCeEEEEECCCC------cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccc-cceecccccc
Confidence 99999999999999876 3455555 66789999999997 69999999999999999887620 00
Q ss_pred -eEeeccCCCeeEEEeCCCC--C-ccCCCCceEEeeecce
Q 020480 267 -QSVVAHQSEVGVSILNASF--R-LSHEDTCTCTHRHSRY 302 (325)
Q Consensus 267 -~~~~~h~~~v~~i~~~p~~--~-~~~~~d~~~~~~~~~~ 302 (325)
....+|.++|.+++|+|++ . ++++.|+++ +|+++.
T Consensus 144 ~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~ 182 (902)
T 2oaj_A 144 SFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE 182 (902)
T ss_dssp HTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT
T ss_pred ccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC
Confidence 2336789999999999964 2 388999999 999754
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=4.7e-20 Score=166.68 Aligned_cols=212 Identities=17% Similarity=0.194 Sum_probs=169.0
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.....+...+..|.. ++.+++|.+. .++.|+.. ..+.+|++.
T Consensus 137 ~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~------------~l~s~~~d-----g~i~vwd~~---------- 187 (445)
T 2ovr_B 137 DDNTLKVWSAVTGKCLRTLVGHTG--GVWSSQMRDN------------IIISGSTD-----RTLKVWNAE---------- 187 (445)
T ss_dssp TTSCEEEEETTTCCEEEECCCCSS--CEEEEEEETT------------EEEEEETT-----SCEEEEETT----------
T ss_pred CCCcEEEEECCCCcEEEEEcCCCC--CEEEEEecCC------------EEEEEeCC-----CeEEEEECC----------
Confidence 567899999887766666666654 4778888632 45555542 368888652
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.++ .......|...|.++.|++ ..+++|+.||.|++||+.. ...+..+.+
T Consensus 188 ----------------~~~-~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~----------~~~~~~~~~ 237 (445)
T 2ovr_B 188 ----------------TGE-CIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIET----------GQCLHVLMG 237 (445)
T ss_dssp ----------------TTE-EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSS----------CCEEEEEEC
T ss_pred ----------------cCc-EEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCC----------CcEEEEEcC
Confidence 122 1223457999999999964 5799999999999999987 355778889
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
|...|.+++| ++. .+++|+.||.|++||++.+ .++..+.+|...|.+++| ++ ..+++|+.||.|++||
T Consensus 238 ~~~~v~~~~~--~~~-~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d 305 (445)
T 2ovr_B 238 HVAAVRCVQY--DGR-RVVSGAYDFMVKVWDPETE------TCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWD 305 (445)
T ss_dssp CSSCEEEEEE--CSS-CEEEEETTSCEEEEEGGGT------EEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEE
T ss_pred CcccEEEEEE--CCC-EEEEEcCCCEEEEEECCCC------cEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEE
Confidence 9999999999 455 8999999999999999876 567788899999999999 44 6899999999999999
Q ss_pred ccCCCCCCCeeEeeccCCCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 257 LRTPSVSKPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
+++++ .+..+.+|...+.++.++++-.++++.|+.+++|+++.
T Consensus 306 ~~~~~---~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~vwd~~~ 348 (445)
T 2ovr_B 306 VETGN---CIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKT 348 (445)
T ss_dssp TTTCC---EEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTT
T ss_pred CCCCC---EEEEEcCCcccEEEEEEeCCEEEEEeCCCeEEEEECCC
Confidence 99988 48888899999999999876556899999999999753
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.85 E-value=1.6e-20 Score=167.26 Aligned_cols=149 Identities=8% Similarity=-0.043 Sum_probs=117.1
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCC---CCcEEEecCCCceEEEEecC--------CCCCeEEEEeCCCcEEEEe
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGAC---SPDLRLRGHSTEGYGLSWSK--------FKEGHLLSGSDDAQICLWD 207 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~---~~~~~~~~h~~~v~~l~~~p--------~~~~~l~s~s~dg~i~iwd 207 (325)
.++|+|+.|++|++||... +.. .++..+.+|.+.|.+++|+| ++. +|+||+.|++|+|||
T Consensus 102 ~~las~~~d~~v~lw~~~~--------~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~-~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 102 LFLACVCQDNTVRLIITKN--------ETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQ-VIASVGDDCTLIIWR 172 (393)
T ss_dssp EEEEEEETTSCEEEEEEET--------TEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEE-EEEEEETTSEEEEEE
T ss_pred CEEEEEeCCCcEEEEECCC--------CccceeeeecccCCCCCceEEEEEccccccccCCCCC-EEEEEECCCeEEEEE
Confidence 6899999999999999876 211 11223568999999999998 566 899999999999999
Q ss_pred CCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCe---------------------
Q 020480 208 INAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV--------------------- 266 (325)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~--------------------- 266 (325)
++.. .++..+..|...|.+++|+|++.++|++|+.||+|++||++++......
T Consensus 173 ~~~~------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 173 LTDE------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EETT------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred CCCC------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 9876 4566677889999999999988779999999999999999987531110
Q ss_pred -eEeeccCCCeeEEEeC-CCCCc--cCCCCceEEeeecce
Q 020480 267 -QSVVAHQSEVGVSILN-ASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 267 -~~~~~h~~~v~~i~~~-p~~~~--~~~~d~~~~~~~~~~ 302 (325)
....+|...+.++.|+ |++.. +++.|+++++|++..
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~ 286 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFA 286 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--
T ss_pred eeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECcc
Confidence 1123577889999997 67773 889999999998754
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.85 E-value=5.4e-20 Score=161.56 Aligned_cols=223 Identities=10% Similarity=0.068 Sum_probs=149.9
Q ss_pred HHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccC
Q 020480 18 NEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDAR 97 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~ 97 (325)
+.++++|+.++..+...+. ..-++.++.|.++. ++++. ++.+++|++.-.. .
T Consensus 80 d~~v~iWd~~~~~~~~~~~---~~~~v~~v~~~~~~------------~~~~~------~~~i~i~d~~~~~--~----- 131 (355)
T 3vu4_A 80 KEVVHIWDDVKKQDVSRIK---VDAPVKDLFLSREF------------IVVSY------GDVISVFKFGNPW--K----- 131 (355)
T ss_dssp TTEEEEEETTTTEEEEEEE---CSSCEEEEEECSSE------------EEEEE------TTEEEEEESSTTC--C-----
T ss_pred ccEEEEEECCCCcEEEEEE---CCCceEEEEEcCCE------------EEEEE------cCEEEEEECCCCc--e-----
Confidence 3589999988765544332 23368888887752 33332 2478888763110 0
Q ss_pred CCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEE--EecCCeEEEEeCCCCCCCCC-----CCCCCCC
Q 020480 98 HYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIAT--KTVSAEVYVFDYSKHPSKPP-----LDGACSP 170 (325)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~--g~~dg~v~vwd~~~~~~~~~-----~~~~~~~ 170 (325)
. ...+.. ....+++++ .++|+ |+.+|.|++||+........ ......+
T Consensus 132 -------~-------~~~~~~--------~~~~~~~s~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p 186 (355)
T 3vu4_A 132 -------R-------ITDDIR--------FGGVCEFSN---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILG 186 (355)
T ss_dssp -------B-------SSCCEE--------EEEEEEEET---TEEEEEESSCTTCEEEEECCC------------------
T ss_pred -------e-------eEEecc--------CCceEEEEc---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCc
Confidence 0 001111 233455666 34555 68999999999986210000 0001123
Q ss_pred -cEEEecCCCceEEEEecCCCCCeEEEEeCCCc-EEEEeCCCCCCCCcccceEeee-c-CCccEEEEEeecCCCcEEEEE
Q 020480 171 -DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ-ICLWDINAAPKNKSLEAMQIFK-V-HEGVVEDVAWHLRHEYLFGSV 246 (325)
Q Consensus 171 -~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~-~-~~~~v~~v~~~p~~~~~l~s~ 246 (325)
+..+.+|...|++++|+|++. +|++|+.|++ |++||++++ .++..+. + |...|++++|+|++ .+|+++
T Consensus 187 ~~~~~~~h~~~v~~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~------~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~ 258 (355)
T 3vu4_A 187 KGVLIKAHTNPIKMVRLNRKSD-MVATCSQDGTIIRVFKTEDG------VLVREFRRGLDRADVVDMKWSTDG-SKLAVV 258 (355)
T ss_dssp CCEEECCCSSCEEEEEECTTSS-EEEEEETTCSEEEEEETTTC------CEEEEEECTTCCSCEEEEEECTTS-CEEEEE
T ss_pred ccEEEEccCCceEEEEECCCCC-EEEEEeCCCCEEEEEECCCC------cEEEEEEcCCCCCcEEEEEECCCC-CEEEEE
Confidence 678899999999999999998 9999999998 999999987 4577777 5 99999999999987 699999
Q ss_pred ecCCcEEEEEccCCCCCCCeeEe---------------------eccCCCeeEEEeCCCCCc--cCCCCceEEeeecce
Q 020480 247 GDDQYLLIWDLRTPSVSKPVQSV---------------------VAHQSEVGVSILNASFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 247 ~~dg~i~iwd~~~~~~~~~~~~~---------------------~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~~ 302 (325)
+.|++|++||++..... ....+ ..+..+...++|++++.. +++.|+.++.|++..
T Consensus 259 s~d~~v~iw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 259 SDKWTLHVFEIFNDQDN-KRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp ETTCEEEEEESSCCSCC-CSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred ECCCEEEEEEccCCCCc-ccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 99999999999865421 11111 111223477999999973 777899999987654
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.85 E-value=6.4e-20 Score=165.79 Aligned_cols=212 Identities=20% Similarity=0.321 Sum_probs=167.1
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...+...+..|.. ++.++.|.+. .++.|+.. ..+.+|++.
T Consensus 177 ~dg~i~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~------------~l~s~s~d-----g~i~~wd~~---------- 227 (445)
T 2ovr_B 177 TDRTLKVWNAETGECIHTLYGHTS--TVRCMHLHEK------------RVVSGSRD-----ATLRVWDIE---------- 227 (445)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSS--CEEEEEEETT------------EEEEEETT-----SEEEEEESS----------
T ss_pred CCCeEEEEECCcCcEEEEECCCCC--cEEEEEecCC------------EEEEEeCC-----CEEEEEECC----------
Confidence 567899999988766655655554 4777777532 36566542 478888653
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.++. ......|...|.++.| ++ ..+++|+.||.|++||+.. ...+..+.+
T Consensus 228 ----------------~~~~-~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~ 277 (445)
T 2ovr_B 228 ----------------TGQC-LHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPET----------ETCLHTLQG 277 (445)
T ss_dssp ----------------SCCE-EEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGG----------TEEEEEECC
T ss_pred ----------------CCcE-EEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCC----------CcEeEEecC
Confidence 1111 2234579999999999 34 6899999999999999986 355778889
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
|...|.+++| ++. .+++|+.||.|++||++++ .++..+.+|...+.++.+++ .++++|+.||.|++||
T Consensus 278 ~~~~v~~~~~--~~~-~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd 345 (445)
T 2ovr_B 278 HTNRVYSLQF--DGI-HVVSGSLDTSIRVWDVETG------NCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWD 345 (445)
T ss_dssp CSSCEEEEEE--CSS-EEEEEETTSCEEEEETTTC------CEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEE
T ss_pred CCCceEEEEE--CCC-EEEEEeCCCeEEEEECCCC------CEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEE
Confidence 9999999999 455 8999999999999999987 45778889999999888863 5899999999999999
Q ss_pred ccCCCCCCCeeEeec---cCCCeeEEEeCCCCCccCCCCceEEeeecce
Q 020480 257 LRTPSVSKPVQSVVA---HQSEVGVSILNASFRLSHEDTCTCTHRHSRY 302 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~---h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~~ 302 (325)
+++++. +..+.. |..+|.+++|+++-.++++.|+.+++|++..
T Consensus 346 ~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~v~iwd~~~ 391 (445)
T 2ovr_B 346 IKTGQC---LQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKT 391 (445)
T ss_dssp TTTCCE---EEEECSTTSCSSCEEEEEECSSEEEEEETTSEEEEEETTT
T ss_pred CCCCcE---EEEEccCCCCCCCEEEEEECCCEEEEEeCCCeEEEEECCC
Confidence 998874 777765 8899999999875556899999999998753
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.83 E-value=2.2e-18 Score=148.00 Aligned_cols=166 Identities=20% Similarity=0.218 Sum_probs=137.2
Q ss_pred EEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEE
Q 020480 117 QIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (325)
Q Consensus 117 ~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 196 (325)
.......|...|++++|+|++ ++||+|+.||.|++|++.. .+.+..+.+|...+.++.+.+ . .+++
T Consensus 59 ~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~~----------~~~~~~~~~h~~~~~~~~~~~--~-~l~s 124 (318)
T 4ggc_A 59 QLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ----------QKRLRNMTSHSARVGSLSWNS--Y-ILSS 124 (318)
T ss_dssp EEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETTT----------TEEEEEEECCSSCEEEEEEET--T-EEEE
T ss_pred EEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecCC----------ceeEEEecCccceEEEeecCC--C-EEEE
Confidence 333445688999999999998 7999999999999999987 455778889999988877654 4 8999
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC-CCeeEeeccCCC
Q 020480 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS-KPVQSVVAHQSE 275 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~h~~~ 275 (325)
++.++.+++|+..... ..+..+.+|...+..+.+++.+ .++++++.||.|++||+++++.. ........|...
T Consensus 125 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~ 198 (318)
T 4ggc_A 125 GSRSGHIHHHDVRVAE-----HHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGA 198 (318)
T ss_dssp EETTSEEEEEETTSSS-----CEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSC
T ss_pred EecCCceEeeecCCCc-----eeEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCc
Confidence 9999999999988764 3466788999999999999987 69999999999999999986632 124455678889
Q ss_pred eeEEEeCCCCCc-----cCCCCceEEeeecce
Q 020480 276 VGVSILNASFRL-----SHEDTCTCTHRHSRY 302 (325)
Q Consensus 276 v~~i~~~p~~~~-----~~~~d~~~~~~~~~~ 302 (325)
|.+++++|.+.. +++.++++++|+.+.
T Consensus 199 v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~ 230 (318)
T 4ggc_A 199 VKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS 230 (318)
T ss_dssp EEEEEECTTSTTEEEEEECTTTCEEEEEETTT
T ss_pred eEEEEecCCCCcEEEEEecCCCCEEEEEeccc
Confidence 999999997652 678889999998644
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=3.4e-18 Score=151.52 Aligned_cols=218 Identities=11% Similarity=0.090 Sum_probs=157.5
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.....+...+..+. .+.+++|.|++. .+++... .++.|.++++.
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~----------~l~~~~~----~d~~i~v~d~~---------- 62 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIPVGS---NPMGAVISPDGT----------KVYVANA----HSNDVSIIDTA---------- 62 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSS----------EEEEEEG----GGTEEEEEETT----------
T ss_pred CCCEEEEEECCCCeEEEEeecCC---CcceEEECCCCC----------EEEEECC----CCCeEEEEECC----------
Confidence 45678999988776655444432 368999999875 3333321 12467777542
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.+ +....+.+...+.+++|+|++..+++++..++.|++||+.. .+.+..+..
T Consensus 63 ----------------~~--~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~----------~~~~~~~~~ 114 (391)
T 1l0q_A 63 ----------------TN--NVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTS----------NTVAGTVKT 114 (391)
T ss_dssp ----------------TT--EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT----------TEEEEEEEC
T ss_pred ----------------CC--eEEEEEECCCCccceEECCCCCEEEEEECCCCEEEEEECCC----------CeEEEEEeC
Confidence 12 22344555669999999999954556767789999999987 233444544
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWD 256 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd 256 (325)
...+.+++|+|++..++++++.++.|++||++++ ..+..+..+ ..+.+++|+|++..++++++.++.|++||
T Consensus 115 -~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~------~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d 186 (391)
T 1l0q_A 115 -GKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTK------AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVID 186 (391)
T ss_dssp -SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT------EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC------cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 4578999999999844478889999999999876 345555544 45799999999865667888999999999
Q ss_pred ccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCC---CCceEEeeecc
Q 020480 257 LRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHE---DTCTCTHRHSR 301 (325)
Q Consensus 257 ~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~---~d~~~~~~~~~ 301 (325)
+++.+. +..+. +...+.+++|+|+++. .++ .++.+++|+..
T Consensus 187 ~~~~~~---~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~ 232 (391)
T 1l0q_A 187 TVTNSV---IDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG 232 (391)
T ss_dssp TTTTEE---EEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETT
T ss_pred CCCCeE---EEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECC
Confidence 998763 44443 5678999999999974 343 68899999875
No 123
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=4.6e-19 Score=159.71 Aligned_cols=169 Identities=7% Similarity=0.045 Sum_probs=125.5
Q ss_pred EeccCCCeeEEEecCCCCcEEE----EEecCCeEEEEeCCCCCCCCCCCCCCCC---cEEEecCCCceEEEEecCCCCCe
Q 020480 121 QINHDGEVNRARYMPQNPFLIA----TKTVSAEVYVFDYSKHPSKPPLDGACSP---DLRLRGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la----~g~~dg~v~vwd~~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~~p~~~~~ 193 (325)
.+.+.+.|++++|+|++ ++|| +|+.|+.|++||+........ ...++ ...+.+|...|.+++|+|+...+
T Consensus 88 ~~~~~~~v~~l~~spdg-~~lav~~~sgs~d~~v~iwd~~~~~~~~~--~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~ 164 (434)
T 2oit_A 88 LVPMKFPIHHLALSCDN-LTLSACMMSSEYGSIIAFFDVRTFSNEAK--QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSM 164 (434)
T ss_dssp EECCSSCEEEEEECTTS-CEEEEEEEETTTEEEEEEEEHHHHHCTTC--SSCCCSEEEECCCSGGGSEEEEEECSSCTTE
T ss_pred cccCCCcccEEEEcCCC-CEEEEEEeccCCCceEEEEEccccccCCc--CCcceeeeeeccCCCCCceEEEEECCCCCCE
Confidence 45688899999999998 5777 788999999999865100000 00122 23455799999999999985559
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-
Q 020480 194 LLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH- 272 (325)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h- 272 (325)
|++++.||+|++||++.+ .......+|...|.+++|+|++ .+|++|+.||.|++||++ +. ....+..|
T Consensus 165 las~s~Dg~v~iwD~~~~------~~~~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~---~~~~~~~~~ 233 (434)
T 2oit_A 165 VAVCLADGSIAVLQVTET------VKVCATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQ---EKKVIPCPP 233 (434)
T ss_dssp EEEEETTSCEEEEEESSS------EEEEEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CC---EEEEECCCT
T ss_pred EEEEECCCeEEEEEcCCC------cceeeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-Cc---ccccccCCc
Confidence 999999999999999976 2344556788899999999997 689999999999999998 33 23333322
Q ss_pred ------CCCeeEEEeCCCCCcc---CCCCc------eEEeeeccee
Q 020480 273 ------QSEVGVSILNASFRLS---HEDTC------TCTHRHSRYL 303 (325)
Q Consensus 273 ------~~~v~~i~~~p~~~~~---~~~d~------~~~~~~~~~~ 303 (325)
...|.+++|++++.+. ...++ .+++|+++..
T Consensus 234 ~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 234 FYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 3379999999988863 22232 3777877654
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=1.1e-17 Score=148.27 Aligned_cols=217 Identities=10% Similarity=0.001 Sum_probs=158.5
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.....+...+..+. ++..++|+|++. .++++.. ..+.|.++++.
T Consensus 52 ~d~~i~v~d~~~~~~~~~~~~~~---~v~~~~~spdg~----------~l~~~~~----~~~~v~v~d~~---------- 104 (391)
T 1l0q_A 52 HSNDVSIIDTATNNVIATVPAGS---SPQGVAVSPDGK----------QVYVTNM----ASSTLSVIDTT---------- 104 (391)
T ss_dssp GGTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSS----------EEEEEET----TTTEEEEEETT----------
T ss_pred CCCeEEEEECCCCeEEEEEECCC---CccceEECCCCC----------EEEEEEC----CCCEEEEEECC----------
Confidence 46789999987766554443333 678999999874 3444432 22467777542
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.+ +....+.+...+.+++|+|++..++++++.++.|++||+.. .+.+..+..
T Consensus 105 ----------------~~--~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~----------~~~~~~~~~ 156 (391)
T 1l0q_A 105 ----------------SN--TVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT----------KAVINTVSV 156 (391)
T ss_dssp ----------------TT--EEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT----------TEEEEEEEC
T ss_pred ----------------CC--eEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC----------CcEEEEEec
Confidence 12 22334556678899999999854558888899999999976 233455555
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe---cCCcEE
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG---DDQYLL 253 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~---~dg~i~ 253 (325)
+ ..+.+++|+|++..++++++.++.|++||++.+ .....+. +...+.+++|+|++. .+++++ .++.|+
T Consensus 157 ~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~------~~~~~~~-~~~~~~~~~~~~~g~-~l~~~~~~~~~~~v~ 227 (391)
T 1l0q_A 157 G-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN------SVIDTVK-VEAAPSGIAVNPEGT-KAYVTNVDKYFNTVS 227 (391)
T ss_dssp C-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTT------EEEEEEE-CSSEEEEEEECTTSS-EEEEEEECSSCCEEE
T ss_pred C-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCC------eEEEEEe-cCCCccceEECCCCC-EEEEEecCcCCCcEE
Confidence 4 467999999999844578889999999999876 3344443 556789999999985 555555 799999
Q ss_pred EEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 254 IWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 254 iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
+||+++++ .+..+..|. .+.+++|+|+++. +++.++.+++|+..
T Consensus 228 ~~d~~~~~---~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 228 MIDTGTNK---ITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp EEETTTTE---EEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEECCCCe---EEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 99999876 366666554 5789999999973 56789999999875
No 125
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.78 E-value=1.2e-18 Score=156.94 Aligned_cols=169 Identities=11% Similarity=0.047 Sum_probs=126.8
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC------CCCcEEEecCCCceEEEEecCCCCCeEE----
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA------CSPDLRLRGHSTEGYGLSWSKFKEGHLL---- 195 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~------~~~~~~~~~h~~~v~~l~~~p~~~~~l~---- 195 (325)
..++.+++++.+ .++++|+.++ +++|+............. ..+... ..+...|.+++|+|++. +|+
T Consensus 37 ~~~n~lavs~~~-~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg~-~lav~~~ 112 (434)
T 2oit_A 37 ERSSLLAVSNKY-GLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDNL-TLSACMM 112 (434)
T ss_dssp SCCBCEEEETTT-TEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTSC-EEEEEEE
T ss_pred CCccEEEEecCC-CEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCCC-EEEEEEe
Confidence 458899999988 6888888887 888875421110000000 011112 24667899999999998 777
Q ss_pred EEeCCCcEEEEeCCCC-----CCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee
Q 020480 196 SGSDDAQICLWDINAA-----PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (325)
Q Consensus 196 s~s~dg~i~iwd~~~~-----~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 270 (325)
+|+.|+.|+|||++.. .....+..+..+.+|...|.+++|+|++..+|++++.||+|++||+++... +....
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~---~~~~~ 189 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVK---VCATL 189 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEE---EEEEE
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcc---eeecc
Confidence 8899999999998754 111111234556779999999999998568999999999999999998753 55566
Q ss_pred ccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 271 AHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 271 ~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+|...|.+++|+|+|.+ +++.|+++++|+.+
T Consensus 190 ~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 190 PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT
T ss_pred CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC
Confidence 78999999999999985 88899999999987
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.75 E-value=7e-17 Score=144.97 Aligned_cols=217 Identities=8% Similarity=-0.057 Sum_probs=154.0
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+.......+..+. -.+..++|.|++. .+++... .++.|.++++.
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~----------~l~~~~~----~~~~i~~~d~~---------- 242 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDLTG--KWSKILLYDPIRD----------LVYCSNW----ISEDISVIDRK---------- 242 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEECSS--SSEEEEEEETTTT----------EEEEEET----TTTEEEEEETT----------
T ss_pred CCCEEEEEECCCceEEEEEcCCC--CCeeEEEEcCCCC----------EEEEEec----CCCcEEEEECC----------
Confidence 45788999987755444443333 3477899999874 3333332 12467777542
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEe--------cCCeEEEEeCCCCCCCCCCCCCC
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKT--------VSAEVYVFDYSKHPSKPPLDGAC 168 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~--------~dg~v~vwd~~~~~~~~~~~~~~ 168 (325)
.+ +....+.+...+.+++|+|++ ..+++++ .||.|++||+.. +
T Consensus 243 ----------------~~--~~~~~~~~~~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~--------~-- 293 (433)
T 3bws_A 243 ----------------TK--LEIRKTDKIGLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDK--------E-- 293 (433)
T ss_dssp ----------------TT--EEEEECCCCSEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTT--------T--
T ss_pred ----------------CC--cEEEEecCCCCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCC--------C--
Confidence 11 223445566679999999998 5777766 488999999986 2
Q ss_pred CCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec
Q 020480 169 SPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 169 ~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~ 248 (325)
+.. ....|...+.+++|+|++..++++++.++.|++||+..+ .....+. +...+.+++|+|++. ++++++.
T Consensus 294 ~~~-~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~------~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~ 364 (433)
T 3bws_A 294 KLI-DTIGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEK------KVQKSIP-VFDKPNTIALSPDGK-YLYVSCR 364 (433)
T ss_dssp EEE-EEEEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTT------EEEEEEE-CSSSEEEEEECTTSS-EEEEEEC
T ss_pred cEE-eeccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCC------cEEEEec-CCCCCCeEEEcCCCC-EEEEEec
Confidence 222 233455688999999999756788899999999999865 3344444 667899999999984 6666655
Q ss_pred ---------------CCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cC-CCCceEEeeecc
Q 020480 249 ---------------DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SH-EDTCTCTHRHSR 301 (325)
Q Consensus 249 ---------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~-~~d~~~~~~~~~ 301 (325)
||.|++||+.+++. +..+.. ...+.+++|+|+|+. ++ +.|+++++|++.
T Consensus 365 ~~~~~~~~~~~~g~~dg~v~~~d~~~~~~---~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 365 GPNHPTEGYLKKGLVLGKVYVIDTTTDTV---KEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp CCCCTTTCTTSCCSSCCEEEEEETTTTEE---EEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred CCCccccccccccccceEEEEEECCCCcE---EEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 57999999988773 555554 567999999999984 33 469999999864
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.72 E-value=5.3e-16 Score=139.02 Aligned_cols=214 Identities=17% Similarity=0.157 Sum_probs=147.4
Q ss_pred HHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCC
Q 020480 19 EEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARH 98 (325)
Q Consensus 19 ~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~ 98 (325)
.++++|+..... ...+..|. -++.+++|+|++. .+++++... ....|+++++.
T Consensus 159 ~~i~i~d~~g~~-~~~l~~~~--~~v~~~~~Spdg~----------~la~~s~~~--~~~~i~~~d~~------------ 211 (415)
T 2hqs_A 159 YELRVSDYDGYN-QFVVHRSP--QPLMSPAWSPDGS----------KLAYVTFES--GRSALVIQTLA------------ 211 (415)
T ss_dssp EEEEEEETTSCS-CEEEEEES--SCEEEEEECTTSS----------EEEEEECTT--SSCEEEEEETT------------
T ss_pred ceEEEEcCCCCC-CEEEeCCC--CcceeeEEcCCCC----------EEEEEEecC--CCcEEEEEECC------------
Confidence 578888876532 23333443 3588999999874 465555422 23467777542
Q ss_pred CCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCC--eEEEEeCCCCCCCCCCCCCCCCcEEEec
Q 020480 99 YDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLRLRG 176 (325)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~ 176 (325)
.++.. ....|.+.+.+++|+|+|..++++++.++ .|++||+.. .....+..
T Consensus 212 --------------tg~~~--~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~-----------~~~~~l~~ 264 (415)
T 2hqs_A 212 --------------NGAVR--QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLAS-----------GQIRQVTD 264 (415)
T ss_dssp --------------TCCEE--EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-----------CCEEECCC
T ss_pred --------------CCcEE--EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCC-----------CCEEeCcC
Confidence 22332 34568889999999999943444776665 499999876 22456778
Q ss_pred CCCceEEEEecCCCCCeEEEEeC-CC--cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC---C
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSD-DA--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---Q 250 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~-dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d---g 250 (325)
|...+.+++|+|++. .|++++. ++ .|.+||+..+. ...+..+...+.+++|+|++. +|++++.+ .
T Consensus 265 ~~~~~~~~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~ 335 (415)
T 2hqs_A 265 GRSNNTEPTWFPDSQ-NLAFTSDQAGRPQVYKVNINGGA-------PQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQ 335 (415)
T ss_dssp CSSCEEEEEECTTSS-EEEEEECTTSSCEEEEEETTSSC-------CEECCCSSSEEEEEEECTTSS-EEEEEEECSSCE
T ss_pred CCCcccceEECCCCC-EEEEEECCCCCcEEEEEECCCCC-------EEEEecCCCcccCeEECCCCC-EEEEEECcCCce
Confidence 888999999999998 6776665 45 67777887652 233455667899999999984 66666653 5
Q ss_pred cEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCc---eEEeeec
Q 020480 251 YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTC---TCTHRHS 300 (325)
Q Consensus 251 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~---~~~~~~~ 300 (325)
.|++||+.+++ ...+..+. .+.+++|+|+|+. .++.++ .+.+|++
T Consensus 336 ~i~~~d~~~~~----~~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 336 HIAKQDLATGG----VQVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEEETTTCC----EEECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred EEEEEECCCCC----EEEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 89999999876 34555554 8999999999984 444444 5666764
No 128
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.72 E-value=5e-17 Score=138.99 Aligned_cols=136 Identities=11% Similarity=0.071 Sum_probs=99.3
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecC---CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEe
Q 020480 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK---FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI 222 (325)
Q Consensus 146 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p---~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~ 222 (325)
.|+.|++|++.. ..+.+..+.+|...+..++|++ ++. +|++|+.|++|+|||++++ +++++
T Consensus 155 ~d~~V~~~~~s~---------dG~~~~s~~~~~~~v~~l~fs~~~g~~~-~LaSgS~D~TIkIWDl~TG------k~l~t 218 (356)
T 2w18_A 155 SDQQVEVMTFAE---------DGGGKENQFLMPPEETILTFAEVQGMQE-ALLGTTIMNNIVIWNLKTG------QLLKK 218 (356)
T ss_dssp TTCEEEEEEECT---------TSCEEEEEEECCCSSCEEEEEEEETSTT-EEEEEETTSEEEEEETTTC------CEEEE
T ss_pred CCCcEEEEEECC---------CCceeeeeccCCCceeeEEeeccCCCCc-eEEEecCCCcEEEEECCCC------cEEEE
Confidence 388889998854 1234566778999999999998 556 8999999999999999988 56777
Q ss_pred eecCC---ccEEEEEeecCCCcE-----------EEEEecCCcEEEEEccCCCCCCCeeEe-----eccCCCeeEEEeCC
Q 020480 223 FKVHE---GVVEDVAWHLRHEYL-----------FGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAHQSEVGVSILNA 283 (325)
Q Consensus 223 ~~~~~---~~v~~v~~~p~~~~~-----------l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~h~~~v~~i~~~p 283 (325)
+.+|. ..+.+++|+|++..+ +++|+.|++|++||..+++. +..+ .+|...+.+..++
T Consensus 219 L~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~---l~v~~~~~p~Gh~~~~lsg~~s- 294 (356)
T 2w18_A 219 MHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLS---VGVMLYCLPPGQAGRFLEGDVK- 294 (356)
T ss_dssp EECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEE---EEEEEECCCTTCCCCEEEEEEE-
T ss_pred EcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEE---EEEEEeeccCCCcceeEccccC-
Confidence 77654 357778999987432 36788999999999998874 4433 3566555555555
Q ss_pred CCCc--cCCCCceEEeeecce
Q 020480 284 SFRL--SHEDTCTCTHRHSRY 302 (325)
Q Consensus 284 ~~~~--~~~~d~~~~~~~~~~ 302 (325)
+.+ +++.|+++++||+..
T Consensus 295 -g~~lASgS~DgTIkIWDl~t 314 (356)
T 2w18_A 295 -DHCAAAILTSGTIAIWDLLL 314 (356)
T ss_dssp -TTEEEEEETTSCEEEEETTT
T ss_pred -CCEEEEEcCCCcEEEEECCC
Confidence 443 777899999999865
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.72 E-value=1.2e-16 Score=143.38 Aligned_cols=168 Identities=9% Similarity=0.016 Sum_probs=133.5
Q ss_pred CCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-----EEecCCCceEEEEe
Q 020480 112 ANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-----RLRGHSTEGYGLSW 186 (325)
Q Consensus 112 ~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~ 186 (325)
..+.++....+.....+.+++|+| +..++++++.++.|++||+.. + .... .+.+|...|.+++|
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~--------g--~~~~~~~~~~~~~~~~~v~~~~~ 177 (433)
T 3bws_A 109 EGITHRFISRFKTGFQPKSVRFID-NTRLAIPLLEDEGMDVLDINS--------G--QTVRLSPPEKYKKKLGFVETISI 177 (433)
T ss_dssp TTCSEEEEEEEECSSCBCCCEESS-SSEEEEEBTTSSSEEEEETTT--------C--CEEEECCCHHHHTTCCEEEEEEE
T ss_pred CCCcceEEEEEcCCCCceEEEEeC-CCeEEEEeCCCCeEEEEECCC--------C--eEeeecCcccccccCCceeEEEE
Confidence 335566667777777788999999 447888888899999999986 2 2222 34578899999999
Q ss_pred cCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCe
Q 020480 187 SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV 266 (325)
Q Consensus 187 ~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 266 (325)
+|++. ++++++.|+.|++||++.+ ..+..+..|...+.+++|+|++..++++++.|+.|++||+++++. +
T Consensus 178 ~~~~~-~~~s~~~d~~v~~~d~~~~------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~---~ 247 (433)
T 3bws_A 178 PEHNE-LWVSQMQANAVHVFDLKTL------AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE---I 247 (433)
T ss_dssp GGGTE-EEEEEGGGTEEEEEETTTC------CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE---E
T ss_pred cCCCE-EEEEECCCCEEEEEECCCc------eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE---E
Confidence 99888 8999999999999999876 456677788899999999999865667777899999999998763 5
Q ss_pred eEeeccCCCeeEEEeCCCCCc--cCC--------CCceEEeeecc
Q 020480 267 QSVVAHQSEVGVSILNASFRL--SHE--------DTCTCTHRHSR 301 (325)
Q Consensus 267 ~~~~~h~~~v~~i~~~p~~~~--~~~--------~d~~~~~~~~~ 301 (325)
..+.. ...+.+++|+|+|.. +++ .|+.+++|+.+
T Consensus 248 ~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~ 291 (433)
T 3bws_A 248 RKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMD 291 (433)
T ss_dssp EECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETT
T ss_pred EEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECC
Confidence 55544 456999999999973 333 47899999864
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.65 E-value=1.8e-14 Score=129.08 Aligned_cols=156 Identities=8% Similarity=0.054 Sum_probs=118.8
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCC---eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEE-E
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSA---EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLL-S 196 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~-s 196 (325)
...|...|.+++|+|+| +.||+++.++ .|++||+.. +. ...+..|...+.+++|+|++. .|+ +
T Consensus 174 l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d~~t--------g~---~~~l~~~~~~~~~~~~spdg~-~la~~ 240 (415)
T 2hqs_A 174 VHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQTLAN--------GA---VRQVASFPRHNGAPAFSPDGS-KLAFA 240 (415)
T ss_dssp EEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTT--------CC---EEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred EeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEECCC--------Cc---EEEeecCCCcccCEEEcCCCC-EEEEE
Confidence 45688999999999999 6888888775 999999987 22 345677888999999999998 555 7
Q ss_pred EeCCCc--EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec-CC--cEEEEEccCCCCCCCeeEeec
Q 020480 197 GSDDAQ--ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQ--YLLIWDLRTPSVSKPVQSVVA 271 (325)
Q Consensus 197 ~s~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~-dg--~i~iwd~~~~~~~~~~~~~~~ 271 (325)
++.++. |++||+.++. ...+..|...+.+++|+|++ ..|++++. ++ .|.+||+.+++ ...+..
T Consensus 241 ~~~~g~~~i~~~d~~~~~-------~~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~~----~~~l~~ 308 (415)
T 2hqs_A 241 LSKTGSLNLYVMDLASGQ-------IRQVTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGA----PQRITW 308 (415)
T ss_dssp ECTTSSCEEEEEETTTCC-------EEECCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSC----CEECCC
T ss_pred EecCCCceEEEEECCCCC-------EEeCcCCCCcccceEECCCC-CEEEEEECCCCCcEEEEEECCCCC----EEEEec
Confidence 776665 9999998752 34566788889999999998 46666664 55 57777887765 345555
Q ss_pred cCCCeeEEEeCCCCCc--cCCC---CceEEeeecc
Q 020480 272 HQSEVGVSILNASFRL--SHED---TCTCTHRHSR 301 (325)
Q Consensus 272 h~~~v~~i~~~p~~~~--~~~~---d~~~~~~~~~ 301 (325)
+...+.+++|+|+|+. .++. +..+.+|+..
T Consensus 309 ~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~ 343 (415)
T 2hqs_A 309 EGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLA 343 (415)
T ss_dssp SSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETT
T ss_pred CCCcccCeEECCCCCEEEEEECcCCceEEEEEECC
Confidence 7778999999999984 2222 3578888764
No 131
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=1.3e-14 Score=122.55 Aligned_cols=207 Identities=12% Similarity=0.112 Sum_probs=136.2
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+....- .+..+. -++.+++|+|++. .++++. ...|.++++.-+
T Consensus 20 ~~~~i~~~d~~~~~~~-~~~~~~--~~v~~~~~spdg~----------~l~~~~------~~~i~~~d~~~~-------- 72 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMR-VVWQTP--ELFEAPNWSPDGK----------YLLLNS------EGLLYRLSLAGD-------- 72 (297)
T ss_dssp CCEEEEEEETTTTEEE-EEEEES--SCCEEEEECTTSS----------EEEEEE------TTEEEEEESSSC--------
T ss_pred cceeEEEEeCCCCcee-eeccCC--cceEeeEECCCCC----------EEEEEc------CCeEEEEeCCCC--------
Confidence 4567888888775543 233343 3578999999875 455543 236777754210
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEe--cCCeEEEEeC--CCCCCCCCCCCCCCCcE
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKT--VSAEVYVFDY--SKHPSKPPLDGACSPDL 172 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~--~dg~v~vwd~--~~~~~~~~~~~~~~~~~ 172 (325)
++........+...+.+++|+|++ +.|++++ .++.+.||.+ .. ....
T Consensus 73 -----------------~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~-----------~~~~ 123 (297)
T 2ojh_A 73 -----------------PSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTG-----------GTPR 123 (297)
T ss_dssp -----------------CSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTC-----------CCCE
T ss_pred -----------------CCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCC-----------CceE
Confidence 111111111234778999999998 6788777 3344555544 43 1233
Q ss_pred EEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcE
Q 020480 173 RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (325)
Q Consensus 173 ~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i 252 (325)
.+..+ ..+..++|+|++..++++++.++.++||+++.... ....+..+...+.+++|+|++..+++++..++.+
T Consensus 124 ~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~ 197 (297)
T 2ojh_A 124 LMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG-----VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM 197 (297)
T ss_dssp ECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC-----CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC
T ss_pred EeecC-CCccceEECCCCCEEEEEECCCCceEEEEEECCCC-----cceEcccCCCccccceECCCCCEEEEEecCCCCc
Confidence 34433 34889999999984444888999999999754321 2345566778899999999985444455569999
Q ss_pred EEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc
Q 020480 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL 287 (325)
Q Consensus 253 ~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~ 287 (325)
++|++..... .+..+..|...+.+++|+|+|+.
T Consensus 198 ~i~~~~~~~~--~~~~~~~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 198 QIWRVRVDGS--SVERITDSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp EEEEEETTSS--CEEECCCCSEEEEEEEECTTSSE
T ss_pred cEEEECCCCC--CcEEEecCCcccCCeEECCCCCE
Confidence 9999974332 36777777888999999999984
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.62 E-value=2.1e-14 Score=124.35 Aligned_cols=234 Identities=12% Similarity=0.134 Sum_probs=145.7
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+.+...-...+......-....++|+|++. .++++... .+.+.++++...
T Consensus 13 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~----------~l~~~~~~----~~~v~~~~~~~~-------- 70 (343)
T 1ri6_A 13 ESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKR----------YLYVGVRP----EFRVLAYRIAPD-------- 70 (343)
T ss_dssp GGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSS----------EEEEEETT----TTEEEEEEECTT--------
T ss_pred CCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCC----------EEEEeecC----CCeEEEEEecCC--------
Confidence 35678888775211111111122223456789999874 45555442 257888877421
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC-CCCcEEEe
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA-CSPDLRLR 175 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~-~~~~~~~~ 175 (325)
.+.+.....+...+.+..++|+|++..+++++..++.|.+|++.. +. ......+.
T Consensus 71 ----------------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~--------~~~~~~~~~~~ 126 (343)
T 1ri6_A 71 ----------------DGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLED--------GLPVGVVDVVE 126 (343)
T ss_dssp ----------------TCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEET--------TEEEEEEEEEC
T ss_pred ----------------CCceeeccccccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCC--------Ccccccccccc
Confidence 234444455555558899999999954445555689999999842 11 12233333
Q ss_pred cCCCceEEEEecCCCCCeEEEEe-CCCcEEEEeCCCCCCCCcccceE--eeec-CCccEEEEEeecCCCcEEEEEecCCc
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAMQ--IFKV-HEGVVEDVAWHLRHEYLFGSVGDDQY 251 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~~--~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~ 251 (325)
. ...+.+++|+|++. .+++++ .++.|++||+...... .... .... ....+..++|+|++..+++++..++.
T Consensus 127 ~-~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~ 201 (343)
T 1ri6_A 127 G-LDGCHSANISPDNR-TLWVPALKQDRICLFTVSDDGHL---VAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS 201 (343)
T ss_dssp C-CTTBCCCEECTTSS-EEEEEEGGGTEEEEEEECTTSCE---EEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE
T ss_pred C-CCCceEEEECCCCC-EEEEecCCCCEEEEEEecCCCce---eeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE
Confidence 3 34688999999998 566665 8999999999862211 1111 2222 34578899999998656666668999
Q ss_pred EEEEEccCCCC-CCCeeEee----cc--CCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 252 LLIWDLRTPSV-SKPVQSVV----AH--QSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 252 i~iwd~~~~~~-~~~~~~~~----~h--~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
|++||+..... ........ ++ ...+.+++|+|+|+. +...++.+.+|++.
T Consensus 202 i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 202 VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 99999964221 11122222 11 235668999999973 55678899999876
No 133
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=7.6e-13 Score=115.20 Aligned_cols=164 Identities=16% Similarity=0.139 Sum_probs=111.9
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
.+.+++|+|++. +++++..++.|.+|++... +.......+..+ ...+..++|+|++..+++++..++.|.+
T Consensus 142 ~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~-------g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v 213 (347)
T 3hfq_A 142 HIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDA-------GQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIAS 213 (347)
T ss_dssp CEEEEEECTTSC-EEEEETTTTEEEEEEECTT-------SCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CceEEEECCCCc-EEEEeCCCCEEEEEEECCC-------CcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEE
Confidence 488899999995 8888778899999999730 222222222222 2367889999999855555678899999
Q ss_pred EeCCCCCCCCcccceEeeecCC------ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEE
Q 020480 206 WDINAAPKNKSLEAMQIFKVHE------GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVS 279 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~------~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i 279 (325)
|++..... .+..+..+.... ..+..++|+|++..+++++..++.|.+||+........+..+..+...+.++
T Consensus 214 ~~~~~~~g--~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~ 291 (347)
T 3hfq_A 214 LKYDTQTG--AFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDF 291 (347)
T ss_dssp EEEETTTT--EEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEE
T ss_pred EEecCCCC--ceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeE
Confidence 99875211 111222222222 4588999999986566777789999999997432212345555566678999
Q ss_pred EeCCCCCc---cCCCCceEEeeec
Q 020480 280 ILNASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 280 ~~~p~~~~---~~~~d~~~~~~~~ 300 (325)
+|+|+|+. +...++.+.+|++
T Consensus 292 ~~spdg~~l~v~~~~~~~v~v~~~ 315 (347)
T 3hfq_A 292 DLDPTEAFVVVVNQNTDNATLYAR 315 (347)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEE
T ss_pred EECCCCCEEEEEEcCCCcEEEEEE
Confidence 99999983 3345588888854
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.58 E-value=2.9e-13 Score=117.84 Aligned_cols=199 Identities=5% Similarity=-0.013 Sum_probs=135.9
Q ss_pred EEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEE
Q 020480 64 QKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIAT 143 (325)
Q Consensus 64 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~ 143 (325)
+++++|+.... ....|.++.+.. ..+++.......+...+..++|+|++ +++++
T Consensus 3 ~~~~vg~y~~~-~~~~i~v~~~d~------------------------~tg~~~~~~~~~~~~~p~~~a~spdg-~l~~~ 56 (347)
T 3hfq_A 3 ERILFGTYTKK-TSQGIYQGTLDT------------------------TAKTLTNDGLLAATQNPTYLALSAKD-CLYSV 56 (347)
T ss_dssp EEEEEEECCSS-SCCEEEEEEEET------------------------TTTEEEEEEEEEECSCCCCEEECTTC-EEEEE
T ss_pred cEEEEEeccCC-CCCCEEEEEEcC------------------------CCCeEEEeeeeeccCCcceEEEccCC-eEEEE
Confidence 56788887543 345788888862 23456665666777888899999998 45555
Q ss_pred Eec--CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe-CCCcEEEEeCCCCCCCCcccce
Q 020480 144 KTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSLEAM 220 (325)
Q Consensus 144 g~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~~~~ 220 (325)
+.. ++.|.+|++.. +....+..+..+...+..++|+|++. +|++++ .++.|.+|++...... ..+
T Consensus 57 ~~~~~~~~v~~~~~~~--------g~~~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~---~~~ 124 (347)
T 3hfq_A 57 DKEDDEGGIAAWQIDG--------QTAHKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGAL---TLT 124 (347)
T ss_dssp EEETTEEEEEEEEEET--------TEEEEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCE---EEE
T ss_pred EecCCCceEEEEEecC--------CcEEEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCe---eec
Confidence 433 68999999965 33333444455777889999999998 677666 7899999999643221 222
Q ss_pred Eeeec---------CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-cCCCeeEEEeCCCCC-c--
Q 020480 221 QIFKV---------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-HQSEVGVSILNASFR-L-- 287 (325)
Q Consensus 221 ~~~~~---------~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~i~~~p~~~-~-- 287 (325)
..+.. +...+.+++|+|++. ++++...++.|++||+........+..+.. ....+..++|+|+|+ +
T Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 125 DTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEE
T ss_pred ceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEE
Confidence 22221 123488899999986 888888899999999983322111222222 233678899999998 3
Q ss_pred cCCCCceEEeeecc
Q 020480 288 SHEDTCTCTHRHSR 301 (325)
Q Consensus 288 ~~~~d~~~~~~~~~ 301 (325)
+...++.+.+|++.
T Consensus 204 ~~~~~~~v~v~~~~ 217 (347)
T 3hfq_A 204 AGELSSQIASLKYD 217 (347)
T ss_dssp EETTTTEEEEEEEE
T ss_pred EeCCCCEEEEEEec
Confidence 45667888888765
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=8.8e-14 Score=120.34 Aligned_cols=176 Identities=7% Similarity=0.052 Sum_probs=117.5
Q ss_pred CceEEEEEeccCCCeeEEEecCCCCcEEEEEecC-CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCC
Q 020480 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVS-AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (325)
Q Consensus 114 ~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~d-g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 192 (325)
+.++....+.+...+.+++|+|++ +++++++.+ +.|.+|++... .+....+..+..+. .+..++|+|++..
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~v~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~s~dg~~ 97 (343)
T 1ri6_A 26 GALTLTQVVDVPGQVQPMVVSPDK-RYLYVGVRPEFRVLAYRIAPD------DGALTFAAESALPG-SLTHISTDHQGQF 97 (343)
T ss_dssp SCEEEEEEEECSSCCCCEEECTTS-SEEEEEETTTTEEEEEEECTT------TCCEEEEEEEECSS-CCSEEEECTTSSE
T ss_pred CcEEEeeeEecCCCCceEEECCCC-CEEEEeecCCCeEEEEEecCC------CCceeeccccccCC-CCcEEEEcCCCCE
Confidence 345556667888899999999998 566666665 99999998720 02223334444444 7889999999984
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCee--Eee
Q 020480 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ--SVV 270 (325)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~ 270 (325)
+++++..++.|.+||+..+.. ......+.. ...+.+++|+|++..+++++..++.|++||+........+. ...
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~ 173 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLP---VGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVT 173 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEE---EEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEecCCCeEEEEECCCCcc---ccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccc
Confidence 334445589999999952211 123333333 34588999999985444444489999999998733211111 222
Q ss_pred c-cCCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 271 A-HQSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 271 ~-h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
. ....+.+++|+|+|+. ++..++.+.+|++.
T Consensus 174 ~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 174 TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 2 3457889999999983 44578899999874
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=2.6e-13 Score=114.52 Aligned_cols=162 Identities=9% Similarity=-0.004 Sum_probs=114.7
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceEEEEecCCCCCeEEEEe
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~~~~~l~s~s 198 (325)
....|.+.|.+++|+|++ ++|++++ ++.|++||+... .........+ ...+.+++|+|++. .|++++
T Consensus 36 ~~~~~~~~v~~~~~spdg-~~l~~~~-~~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~ 103 (297)
T 2ojh_A 36 VVWQTPELFEAPNWSPDG-KYLLLNS-EGLLYRLSLAGD---------PSPEKVDTGFATICNNDHGISPDGA-LYAISD 103 (297)
T ss_dssp EEEEESSCCEEEEECTTS-SEEEEEE-TTEEEEEESSSC---------CSCEECCCTTCCCBCSCCEECTTSS-EEEEEE
T ss_pred eeccCCcceEeeEECCCC-CEEEEEc-CCeEEEEeCCCC---------CCceEeccccccccccceEECCCCC-EEEEEE
Confidence 456689999999999999 6788765 789999998650 1122223344 36788999999998 788888
Q ss_pred --CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCe
Q 020480 199 --DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (325)
Q Consensus 199 --~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 276 (325)
.++...||.+..... ....+..+. .+..++|+|++..++++++.++.++||++..... ....+..+...+
T Consensus 104 ~~~~~~~~l~~~~~~~~-----~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~ 175 (297)
T 2ojh_A 104 KVEFGKSAIYLLPSTGG-----TPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG--VETRLTHGEGRN 175 (297)
T ss_dssp CTTTSSCEEEEEETTCC-----CCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC--CEEECCCSSSCE
T ss_pred eCCCCcceEEEEECCCC-----ceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCC--cceEcccCCCcc
Confidence 335566665543211 123333333 4888999999865555888999999999764332 356667788899
Q ss_pred eEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 277 GVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 277 ~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
.+++|+|+|+. .+..++.+++|.+.
T Consensus 176 ~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 176 DGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp EEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccceECCCCCEEEEEecCCCCccEEEEC
Confidence 99999999983 34457888888764
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=3.8e-13 Score=116.09 Aligned_cols=227 Identities=11% Similarity=0.059 Sum_probs=144.9
Q ss_pred hHHHHhhhHhcChhHHHHhhhcCCCCCceEEEEeeCCCCCCCCCcceEEEEEEecCCCCCCCeEEEEEEECCCCCCCccc
Q 020480 17 INEEYKIWKKNTPFLYDLVITHALEWPSLTVEWLPDREEPPGKDYSVQKMILGTHTSENEPNYLMLAQVQLPLDDSENDA 96 (325)
Q Consensus 17 ~~~~~~iw~~~~~~~y~~~~~~~~~~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~ 96 (325)
.+.++++|+..+..+...+... .. +. .++|.|++. .+++.... .+.|.+++..
T Consensus 18 ~~~~v~~~d~~~~~~~~~~~~~-~~-~~-~~~~s~dg~----------~l~~~~~~----~~~i~~~d~~---------- 70 (331)
T 3u4y_A 18 HLRRISFFSTDTLEILNQITLG-YD-FV-DTAITSDCS----------NVVVTSDF----CQTLVQIETQ---------- 70 (331)
T ss_dssp GGTEEEEEETTTCCEEEEEECC-CC-EE-EEEECSSSC----------EEEEEEST----TCEEEEEECS----------
T ss_pred CCCeEEEEeCcccceeeeEEcc-CC-cc-eEEEcCCCC----------EEEEEeCC----CCeEEEEECC----------
Confidence 3567888888776554433322 22 34 899999874 34444332 2366666442
Q ss_pred CCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCC---eEEEEeCCCCCCCCCCCCCCCCcEE
Q 020480 97 RHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSA---EVYVFDYSKHPSKPPLDGACSPDLR 173 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg---~v~vwd~~~~~~~~~~~~~~~~~~~ 173 (325)
.+++.......+..+..+++|+|++ ++++++..++ .|.+||+.. ...+..
T Consensus 71 ----------------~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~----------~~~~~~ 123 (331)
T 3u4y_A 71 ----------------LEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLK----------NKFIST 123 (331)
T ss_dssp ----------------SSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTT----------TEEEEE
T ss_pred ----------------CCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCC----------CCeEEE
Confidence 1222122223345555559999999 5666555553 999999976 233444
Q ss_pred EecCCCceEEEEecCCCCCeEEEEeCCCc-EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcE
Q 020480 174 LRGHSTEGYGLSWSKFKEGHLLSGSDDAQ-ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (325)
Q Consensus 174 ~~~h~~~v~~l~~~p~~~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i 252 (325)
+.. .....+++|+|++..+++++..++. |.+|++.......... ............++|+|++..+++++..++.|
T Consensus 124 ~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~--~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 200 (331)
T 3u4y_A 124 IPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG--QEFISGGTRPFNITFTPDGNFAFVANLIGNSI 200 (331)
T ss_dssp EEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE--EEEECSSSSEEEEEECTTSSEEEEEETTTTEE
T ss_pred EEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC--CccccCCCCccceEECCCCCEEEEEeCCCCeE
Confidence 443 4456899999999856666677788 9999998543211100 11223445688999999986567777789999
Q ss_pred EEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 253 LIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 253 ~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
++||+.+++....+..+. ....+..++|+|+|+. +...++.+.+|+..
T Consensus 201 ~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~ 251 (331)
T 3u4y_A 201 GILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQL 251 (331)
T ss_dssp EEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETT
T ss_pred EEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECC
Confidence 999998877311144554 3467789999999993 44457778888764
No 138
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=2.1e-12 Score=119.39 Aligned_cols=182 Identities=10% Similarity=0.032 Sum_probs=129.5
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..+..+.++|++..++++...++.|.+||+.. .....+..+ .+...+.++.|+|++..+++++..+++|.+
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~--------~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v 350 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKETGKVLLVNYKD--------IDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAV 350 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTTTEEEEEECTT--------SSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEE
T ss_pred CceEEEEECCCCCEEEEEECCCCeEEEEEecC--------CCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEE
Confidence 37889999998878889999999999999986 211112233 466778899999999944556667899999
Q ss_pred EeCCCCCCCCcccceEeeec----CCccEEEEEeecCCCcEEEEEe-cCCcEEEEEccCCCC----CCCeeEeeccCCCe
Q 020480 206 WDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSV----SKPVQSVVAHQSEV 276 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v 276 (325)
||+.++ .++..+.. |......+ ++|++..+++++. .|++|.+||+.+... .+.+.++..|...+
T Consensus 351 ~D~~tg------~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~ 423 (543)
T 1nir_A 351 IDSKDR------RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGS 423 (543)
T ss_dssp EETTTT------EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCC
T ss_pred EECCCC------eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCc
Confidence 999987 33444442 54433333 4787556788876 689999999987221 23588889898889
Q ss_pred eEEEeCCCCCc--cCC-------CCceEEeeecceeeecc--------------CeeEEEeecCCCcccc
Q 020480 277 GVSILNASFRL--SHE-------DTCTCTHRHSRYLLYKF--------------PFFVLVFPLFPSLQHY 323 (325)
Q Consensus 277 ~~i~~~p~~~~--~~~-------~d~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~ 323 (325)
..|+|+|+|+. +++ .+.++.+|++....-.| +.....+.+.|+.+..
T Consensus 424 ~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~ 493 (543)
T 1nir_A 424 LFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEV 493 (543)
T ss_dssp CCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEE
T ss_pred eEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEE
Confidence 99999999985 333 26799999986543222 2345566666666543
No 139
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.51 E-value=9.3e-13 Score=121.83 Aligned_cols=154 Identities=16% Similarity=0.127 Sum_probs=118.9
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeC--CCCCCCCCCCCCCCCcEEEecCCCceEEEEecC----CCCCeEEEEe-CC
Q 020480 128 VNRARYMPQNPFLIATKTVSAEVYVFDY--SKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK----FKEGHLLSGS-DD 200 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg~v~vwd~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p----~~~~~l~s~s-~d 200 (325)
+..++|+|++ +++++++.++.|++||+ .+ ...+.++. +...+..++|+| ++. ++++++ .+
T Consensus 181 ~~~v~~spdg-~~l~v~~~d~~V~v~D~~~~t----------~~~~~~i~-~g~~p~~va~sp~~~~dg~-~l~v~~~~~ 247 (543)
T 1nir_A 181 VHISRMSASG-RYLLVIGRDARIDMIDLWAKE----------PTKVAEIK-IGIEARSVESSKFKGYEDR-YTIAGAYWP 247 (543)
T ss_dssp EEEEEECTTS-CEEEEEETTSEEEEEETTSSS----------CEEEEEEE-CCSEEEEEEECCSTTCTTT-EEEEEEEES
T ss_pred cceEEECCCC-CEEEEECCCCeEEEEECcCCC----------CcEEEEEe-cCCCcceEEeCCCcCCCCC-EEEEEEccC
Confidence 8899999999 68888899999999999 44 33455565 455689999999 998 677776 58
Q ss_pred CcEEEEeCCCCCCCCcccceEeeec----------C-CccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKV----------H-EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~----------~-~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
++|.+||..+. .++..+.. | ...+.++.++|++..++++...++.|.+||+.+.+.. .+..+
T Consensus 248 ~~v~v~D~~t~------~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l-~~~~i 320 (543)
T 1nir_A 248 PQFAIMDGETL------EPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNL-TVTSI 320 (543)
T ss_dssp SEEEEEETTTC------CEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSC-EEEEE
T ss_pred CeEEEEecccc------ccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcc-eeEEe
Confidence 99999998876 33444432 2 2378999999988888889999999999999887641 11233
Q ss_pred eccCCCeeEEEeCCCCCc---cCCCCceEEeeecce
Q 020480 270 VAHQSEVGVSILNASFRL---SHEDTCTCTHRHSRY 302 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~~ 302 (325)
.+...+.+++|+|+|++ ++..++++.+||...
T Consensus 321 -~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t 355 (543)
T 1nir_A 321 -GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD 355 (543)
T ss_dssp -ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT
T ss_pred -ccCcCccCceECCCCCEEEEEecCCCeEEEEECCC
Confidence 35677899999999984 445678999998653
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.49 E-value=2e-11 Score=106.06 Aligned_cols=152 Identities=11% Similarity=0.119 Sum_probs=113.0
Q ss_pred eeEEEecCCCCcEEEEE-ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 128 VNRARYMPQNPFLIATK-TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g-~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
+.++.|+|++..+++++ +.++.|.+||... .+.+..+..+...+.+++|+|++. .+++++.++.|.+|
T Consensus 143 ~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~ 211 (353)
T 3vgz_A 143 PRELVADDATNTVYISGIGKESVIWVVDGGN----------IKLKTAIQNTGKMSTGLALDSEGK-RLYTTNADGELITI 211 (353)
T ss_dssp EEEEEEETTTTEEEEEEESSSCEEEEEETTT----------TEEEEEECCCCTTCCCCEEETTTT-EEEEECTTSEEEEE
T ss_pred CceEEECCCCCEEEEEecCCCceEEEEcCCC----------CceEEEecCCCCccceEEECCCCC-EEEEEcCCCeEEEE
Confidence 67899999985444444 3588999999976 333455554566688999999998 78888899999999
Q ss_pred eCCCCCCCCcccceEeeec----CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeC
Q 020480 207 DINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~ 282 (325)
|+.++. ....+.. +...+..++|+|++..++++...++.|.+||+.+++. +..+.... ..+++|+
T Consensus 212 d~~~~~------~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~---~~~~~~~~--~~~~~~s 280 (353)
T 3vgz_A 212 DTADNK------ILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNI---LAKVAAPE--SLAVLFN 280 (353)
T ss_dssp ETTTTE------EEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCE---EEEEECSS--CCCEEEE
T ss_pred ECCCCe------EEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcE---EEEEEcCC--CceEEEC
Confidence 998763 3333332 4556888999999865666666679999999988773 55554322 3569999
Q ss_pred CCCC-c--cCCCCceEEeeecc
Q 020480 283 ASFR-L--SHEDTCTCTHRHSR 301 (325)
Q Consensus 283 p~~~-~--~~~~d~~~~~~~~~ 301 (325)
|+|. + +...++.+.+|+..
T Consensus 281 ~dg~~l~v~~~~~~~v~~~d~~ 302 (353)
T 3vgz_A 281 PARNEAYVTHRQAGKVSVIDAK 302 (353)
T ss_dssp TTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCEEEEEECCCCeEEEEECC
Confidence 9998 3 45568899999864
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.49 E-value=5.8e-14 Score=134.70 Aligned_cols=158 Identities=13% Similarity=0.064 Sum_probs=108.2
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC----------------ceEEEE
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST----------------EGYGLS 185 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~----------------~v~~l~ 185 (325)
..|...+..++|+|+| +.||.++ ++.|++|++.. +.. ......+.. .+.++.
T Consensus 148 ~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~--------g~~--~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 215 (741)
T 2ecf_A 148 THGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLAS--------GRQ--MQLTADGSTTIGNGIAEFVADEEMDRHTGYW 215 (741)
T ss_dssp CCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTT--------TEE--EECCCCCCSSEEESCCCHHHHHHSCCCCSEE
T ss_pred ccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCC--------CCE--EEeccCCccceeccccceeeeeccccccceE
Confidence 3466789999999999 6788766 56999999976 111 111112222 147899
Q ss_pred ecCCCCCeEEEEeCCC---------------------------------cEEEEeCCC-CCCCCcccceEeeecCCccEE
Q 020480 186 WSKFKEGHLLSGSDDA---------------------------------QICLWDINA-APKNKSLEAMQIFKVHEGVVE 231 (325)
Q Consensus 186 ~~p~~~~~l~s~s~dg---------------------------------~i~iwd~~~-~~~~~~~~~~~~~~~~~~~v~ 231 (325)
|+|++. .|++++.|+ .|++||+.+ +.. ..+.....|...+.
T Consensus 216 ~SpDg~-~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~----~~~~~~~~~~~~~~ 290 (741)
T 2ecf_A 216 WAPDDS-AIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT----QWIDLGKEQDIYLA 290 (741)
T ss_dssp ECTTSS-CEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC----EEECCCSCSSEEEE
T ss_pred ECCCCC-EEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCce----EEecCCCCcceEEE
Confidence 999999 688877665 788999887 532 11111114777899
Q ss_pred EEEeecCCCcEEEEEe-----cCCcEEEEEccCCCCCCCeeEeeccCC----CeeEEEeCCCCCc--cCCCCceEEeeec
Q 020480 232 DVAWHLRHEYLFGSVG-----DDQYLLIWDLRTPSVSKPVQSVVAHQS----EVGVSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 232 ~v~~~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~h~~----~v~~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
.++| |++. .|++++ .+..|++||+.+++. ...+..+.. .+.+++|+|+|++ +++.++..++|.+
T Consensus 291 ~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 365 (741)
T 2ecf_A 291 RVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASNQQ---RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRI 365 (741)
T ss_dssp EEEE-EETT-EEEEEEEETTSSEEEEEEEETTTCCE---EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEE
T ss_pred EEEe-CCCC-EEEEEEecccCCeEEEEEEECCCCce---EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEE
Confidence 9999 9985 555444 357799999998873 444444433 4578999999985 5667777777754
Q ss_pred c
Q 020480 301 R 301 (325)
Q Consensus 301 ~ 301 (325)
.
T Consensus 366 ~ 366 (741)
T 2ecf_A 366 D 366 (741)
T ss_dssp C
T ss_pred c
Confidence 3
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.49 E-value=8.9e-12 Score=108.26 Aligned_cols=161 Identities=12% Similarity=0.019 Sum_probs=117.9
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---------ceEEEEecCCC
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---------EGYGLSWSKFK 190 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~~p~~ 190 (325)
..+.....+..++|+|++..+++++..++.|.+||..+ .+.+..+..+.. .+.+++|+|++
T Consensus 83 ~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 152 (353)
T 3vgz_A 83 QAIHNDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKT----------GEVKGRLVLDDRKRTEEVRPLQPRELVADDAT 152 (353)
T ss_dssp EEEEESSCCCSEEEETTTTEEEEEETTTTEEEEEETTT----------CCEEEEEESCCCCCCSSCCCCEEEEEEEETTT
T ss_pred EEEecCCCcceEEECCCCCEEEEEecCCCEEEEEeCCC----------CeeEEEEecCCCccccccCCCCCceEEECCCC
Confidence 34445566889999999955677777789999999976 233444544332 26889999999
Q ss_pred CCeEEEEe--CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeE
Q 020480 191 EGHLLSGS--DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (325)
Q Consensus 191 ~~~l~s~s--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 268 (325)
. .+++++ .++.|.+||..++ .....+..+...+..++|+|++ ..+++++.++.|.+||+.+++. +..
T Consensus 153 ~-~l~~~~~~~~~~i~~~d~~~~------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~---~~~ 221 (353)
T 3vgz_A 153 N-TVYISGIGKESVIWVVDGGNI------KLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKI---LSR 221 (353)
T ss_dssp T-EEEEEEESSSCEEEEEETTTT------EEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEE---EEE
T ss_pred C-EEEEEecCCCceEEEEcCCCC------ceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeE---EEE
Confidence 8 455554 5789999999876 3455555455568889999998 5777888899999999998773 444
Q ss_pred eec----cCCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 269 VVA----HQSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 269 ~~~----h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
+.. +...+.+++|+|+|.. +...++.+.+|+..
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 432 4556888999999983 44456888888764
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.48 E-value=3.9e-13 Score=128.57 Aligned_cols=153 Identities=8% Similarity=-0.005 Sum_probs=106.4
Q ss_pred CeeEEEecCCCCcEEEEEecC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~d---------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 197 (325)
.|.+++|+|+| +.|++++.+ +.|++||+.. +....+....+|...+..++|+|+|. .|+++
T Consensus 62 ~v~~~~~SpDg-~~l~~~~~~~~~~~~~~~~~i~~~d~~~--------~~~~~l~~~~~~~~~~~~~~~SPdG~-~la~~ 131 (723)
T 1xfd_A 62 RAIRYEISPDR-EYALFSYNVEPIYQHSYTGYYVLSKIPH--------GDPQSLDPPEVSNAKLQYAGWGPKGQ-QLIFI 131 (723)
T ss_dssp TCSEEEECTTS-SEEEEEESCCCCSSSCCCSEEEEEESSS--------CCCEECCCTTCCSCCCSBCCBCSSTT-CEEEE
T ss_pred ccceEEECCCC-CEEEEEecCccceeecceeeEEEEECCC--------CceEeccCCccccccccccEECCCCC-EEEEE
Confidence 49999999999 688887664 7889999987 22211212224555688999999999 78887
Q ss_pred eCCCcEEEEeCCCCCCCCcccceEeeecCCc------------------cEEEEEeecCCCcEEEEEecCC---------
Q 020480 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEG------------------VVEDVAWHLRHEYLFGSVGDDQ--------- 250 (325)
Q Consensus 198 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~------------------~v~~v~~~p~~~~~l~s~~~dg--------- 250 (325)
+. +.|++||+.++.. ......+.. .+.+++|+|++ ..|++++.|+
T Consensus 132 ~~-~~i~~~~~~~g~~------~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~ 203 (723)
T 1xfd_A 132 FE-NNIYYCAHVGKQA------IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELP 203 (723)
T ss_dssp ET-TEEEEESSSSSCC------EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEEC
T ss_pred EC-CeEEEEECCCCce------EEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEee
Confidence 75 7999999987632 222222222 23789999998 5777776543
Q ss_pred -------------------------cEEEEEccCCCCCCCeeEeecc------CCCeeEEEeCCCCCcc------CCCCc
Q 020480 251 -------------------------YLLIWDLRTPSVSKPVQSVVAH------QSEVGVSILNASFRLS------HEDTC 293 (325)
Q Consensus 251 -------------------------~i~iwd~~~~~~~~~~~~~~~h------~~~v~~i~~~p~~~~~------~~~d~ 293 (325)
.|++||+.+++. ...+..+ ...+.+++|+|+|++. +..+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~---~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~ 280 (723)
T 1xfd_A 204 TYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTH---DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVS 280 (723)
T ss_dssp CCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCC---CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEE
T ss_pred ccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCce---eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeE
Confidence 799999988763 3444433 5678999999999852 22345
Q ss_pred eEEeeec
Q 020480 294 TCTHRHS 300 (325)
Q Consensus 294 ~~~~~~~ 300 (325)
.+.+|+.
T Consensus 281 ~i~~~d~ 287 (723)
T 1xfd_A 281 ILTLCDA 287 (723)
T ss_dssp EEEEEET
T ss_pred EEEEEeC
Confidence 6777765
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.48 E-value=4e-13 Score=128.44 Aligned_cols=211 Identities=13% Similarity=0.123 Sum_probs=134.9
Q ss_pred HHHHhhhHhcChhHHHHhhhcCCC-CCceEEEEeeCCCCCCCCCcceEEEEEEecCCCC----CCCeEEEEEEECCCCCC
Q 020480 18 NEEYKIWKKNTPFLYDLVITHALE-WPSLTVEWLPDREEPPGKDYSVQKMILGTHTSEN----EPNYLMLAQVQLPLDDS 92 (325)
Q Consensus 18 ~~~~~iw~~~~~~~y~~~~~~~~~-~p~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~i~~~~~~~~~~ 92 (325)
+.++++|+..+......+..+... ..+.+++|+|++. .++++...... ....+.++++.
T Consensus 36 dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~----------~l~~~~~~~~~~~~~~~~~i~~~d~~------ 99 (723)
T 1xfd_A 36 KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDRE----------YALFSYNVEPIYQHSYTGYYVLSKIP------ 99 (723)
T ss_dssp SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSS----------EEEEEESCCCCSSSCCCSEEEEEESS------
T ss_pred CCCEEEEECCCCcEEEEeccccccccccceEEECCCCC----------EEEEEecCccceeecceeeEEEEECC------
Confidence 447899998887655455444321 2478999999985 45555543221 12567777542
Q ss_pred CcccCCCCcccCCCCCCCCCCCceEEEEE-eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCc
Q 020480 93 ENDARHYDDDRSDFGGFGCANGKVQIIQQ-INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPD 171 (325)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~ 171 (325)
.++...+.. ..|...+..++|+|+| +.||.++. +.|++|++.. + ...
T Consensus 100 --------------------~~~~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~--------g--~~~ 147 (723)
T 1xfd_A 100 --------------------HGDPQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVG--------K--QAI 147 (723)
T ss_dssp --------------------SCCCEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSS--------S--CCE
T ss_pred --------------------CCceEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCC--------C--ceE
Confidence 112111111 1244558899999999 67888765 7999999876 2 222
Q ss_pred EEEecCCCc------------------eEEEEecCCCCCeEEEEeCCC--------------------------------
Q 020480 172 LRLRGHSTE------------------GYGLSWSKFKEGHLLSGSDDA-------------------------------- 201 (325)
Q Consensus 172 ~~~~~h~~~------------------v~~l~~~p~~~~~l~s~s~dg-------------------------------- 201 (325)
.....+... +.+++|+|++. .|++++.++
T Consensus 148 ~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~-~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 226 (723)
T 1xfd_A 148 RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGT-RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENP 226 (723)
T ss_dssp EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSS-EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCC
T ss_pred EEecCCCCCceECcccceeEEEEeccCcceEEECCCCC-EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCC
Confidence 223333322 37899999999 788876543
Q ss_pred --cEEEEeCCCCCCCCcccceEeeec------CCccEEEEEeecCCCcEEEEEec----CCcEEEEEccCCCCCCCeeEe
Q 020480 202 --QICLWDINAAPKNKSLEAMQIFKV------HEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 202 --~i~iwd~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~ 269 (325)
.|++||+.++.. ...+.. +...+..++|+|++ .++++.+. +..|++||+.+++. ...+
T Consensus 227 ~~~l~~~d~~~~~~------~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~g~~---~~~~ 296 (723)
T 1xfd_A 227 SISLHVIGLNGPTH------DLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATTGVC---TKKH 296 (723)
T ss_dssp EEEEEEEESSSSCC------CEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTTCCE---EEEE
T ss_pred eeEEEEEECCCCce------eEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCCCcc---eEEE
Confidence 799999987642 223333 36679999999998 46666543 35799999988773 3333
Q ss_pred e-ccCCCee----EEEeCCCCCc
Q 020480 270 V-AHQSEVG----VSILNASFRL 287 (325)
Q Consensus 270 ~-~h~~~v~----~i~~~p~~~~ 287 (325)
. .+...+. +++|+|+|+.
T Consensus 297 ~~~~~~~~~~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 297 EDESEAWLHRQNEEPVFSKDGRK 319 (723)
T ss_dssp EEECSSCCCCCCCCCEECTTSCS
T ss_pred EeccCCEEeccCCCceEcCCCCe
Confidence 3 2344443 7899999983
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=7.1e-12 Score=108.06 Aligned_cols=159 Identities=4% Similarity=-0.068 Sum_probs=112.9
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCC-cEEEecCCCceEEEEecCCCCCeEEEEeCCC-
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP-DLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA- 201 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg- 201 (325)
+...+ .++|+|++..+++++..++.|.+||... ... ...+..+..+..+++|+|++. +++++..++
T Consensus 39 ~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~ 106 (331)
T 3u4y_A 39 GYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQL----------EPPKVVAIQEGQSSMADVDITPDDQ-FAVTVTGLNH 106 (331)
T ss_dssp CCCEE-EEEECSSSCEEEEEESTTCEEEEEECSS----------SSCEEEEEEECSSCCCCEEECTTSS-EEEECCCSSS
T ss_pred cCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCC----------CceeEEecccCCCCccceEECCCCC-EEEEecCCCC
Confidence 34555 9999999954566666689999999986 233 455666666665599999998 677555553
Q ss_pred --cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCc-EEEEEccCCCCCCCe-eEeeccCCCee
Q 020480 202 --QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY-LLIWDLRTPSVSKPV-QSVVAHQSEVG 277 (325)
Q Consensus 202 --~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~-i~iwd~~~~~~~~~~-~~~~~h~~~v~ 277 (325)
.|.+||+..+ ..+..+.. .....+++|+|++..+++++..++. |.+|++......... .........+.
T Consensus 107 ~~~i~v~d~~~~------~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 179 (331)
T 3u4y_A 107 PFNMQSYSFLKN------KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPF 179 (331)
T ss_dssp SCEEEEEETTTT------EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEE
T ss_pred cccEEEEECCCC------CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCcc
Confidence 8999999876 33444443 4457899999998667777777788 999999865421000 11123345689
Q ss_pred EEEeCCCCC-c--cCCCCceEEeeecc
Q 020480 278 VSILNASFR-L--SHEDTCTCTHRHSR 301 (325)
Q Consensus 278 ~i~~~p~~~-~--~~~~d~~~~~~~~~ 301 (325)
+++|+|+|+ + ++..++.+.+|+..
T Consensus 180 ~~~~spdg~~l~v~~~~~~~v~v~d~~ 206 (331)
T 3u4y_A 180 NITFTPDGNFAFVANLIGNSIGILETQ 206 (331)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred ceEECCCCCEEEEEeCCCCeEEEEECC
Confidence 999999998 3 55568899999865
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.46 E-value=2.8e-12 Score=127.66 Aligned_cols=154 Identities=9% Similarity=0.068 Sum_probs=120.5
Q ss_pred eccCC-CeeEEEecCCCCcEEEEEecCCeEE-EEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 122 INHDG-EVNRARYMPQNPFLIATKTVSAEVY-VFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 122 ~~h~~-~v~~v~~~~~~~~~la~g~~dg~v~-vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
..|.+ .+..++|+ ++ ..|+.++.++.+. +|++.. + ....+.+|...+..++|+|++. .|++++.
T Consensus 333 ~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~--------~---~~~~l~~~~~~~~~~~~SpDG~-~la~~~~ 398 (1045)
T 1k32_A 333 PEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRT--------G---KAEKFEENLGNVFAMGVDRNGK-FAVVAND 398 (1045)
T ss_dssp SCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTT--------C---CEEECCCCCCSEEEEEECTTSS-EEEEEET
T ss_pred cCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCC--------C---CceEecCCccceeeeEECCCCC-EEEEECC
Confidence 45666 88999999 87 6788888888888 899876 2 2334457888999999999999 8999999
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC----------cEEEEEccCCCCCCCeeEe
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ----------YLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg----------~i~iwd~~~~~~~~~~~~~ 269 (325)
++.|++||+.++. .......|...+.+++|+|++ ..|++++.++ .|++||+.+++ +..+
T Consensus 399 ~~~v~~~d~~tg~------~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~----~~~l 467 (1045)
T 1k32_A 399 RFEIMTVDLETGK------PTVIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK----IFAA 467 (1045)
T ss_dssp TSEEEEEETTTCC------EEEEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE----EEEC
T ss_pred CCeEEEEECCCCc------eEEeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc----EEEe
Confidence 9999999998763 344455788889999999998 5666666544 89999998765 5666
Q ss_pred eccCCCeeEEEeCCCCCc--cCCCCceEEeeec
Q 020480 270 VAHQSEVGVSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
..|...+.+++|+|+|+. .++.+.....|+.
T Consensus 468 ~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~ 500 (1045)
T 1k32_A 468 TTENSHDYAPAFDADSKNLYYLSYRSLDPSPDR 500 (1045)
T ss_dssp SCSSSBEEEEEECTTSCEEEEEESCCCCCEECS
T ss_pred eCCCcccCCceEcCCCCEEEEEecccCCcCcch
Confidence 778888999999999983 4555555555554
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.46 E-value=1.5e-12 Score=124.86 Aligned_cols=153 Identities=8% Similarity=-0.024 Sum_probs=107.4
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..|.+++|+|+| +.|++++. +.|++||+.. +.......+..|...+..++|+|++. .|++++ ++.|++
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~--------~~~~~~~~l~~~~~~~~~~~~SPDG~-~la~~~-~~~i~~ 176 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQ--------EGKAAVRQLTHGEGFATDAKLSPKGG-FVSFIR-GRNLWV 176 (741)
T ss_dssp EESCCCEECTTS-SEEEEEET-TEEEEEESSS--------CSTTSCCBCCCSSSCEEEEEECTTSS-EEEEEE-TTEEEE
T ss_pred cCcceeEECCCC-CEEEEEeC-CcEEEEECCC--------CCcceEEEcccCCcccccccCCCCCC-EEEEEe-CCcEEE
Confidence 358899999999 67777765 8999999986 20002334567778899999999998 788877 569999
Q ss_pred EeCCCCCCCCcccceEeeecCCcc----------------EEEEEeecCCCcEEEEEecCC-------------------
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGV----------------VEDVAWHLRHEYLFGSVGDDQ------------------- 250 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~----------------v~~v~~~p~~~~~l~s~~~dg------------------- 250 (325)
||+.++. .......+... +..++|+|++ ..|++++.|+
T Consensus 177 ~d~~~g~------~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 177 IDLASGR------QMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp EETTTTE------EEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred EecCCCC------EEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 9998752 22222222221 4789999998 4666776655
Q ss_pred --------------cEEEEEccC-CCCCCCeeEee--ccCCCeeEEEeCCCCCcc-------CCCCceEEeeecc
Q 020480 251 --------------YLLIWDLRT-PSVSKPVQSVV--AHQSEVGVSILNASFRLS-------HEDTCTCTHRHSR 301 (325)
Q Consensus 251 --------------~i~iwd~~~-~~~~~~~~~~~--~h~~~v~~i~~~p~~~~~-------~~~d~~~~~~~~~ 301 (325)
.|++||+.+ ++. ..... .|...+.+++| |+|+.. +..+..+.+|+..
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~ 320 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLA 320 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETT
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECC
Confidence 788999988 663 22222 46778999999 999841 2245667777653
No 148
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.43 E-value=6.9e-12 Score=108.05 Aligned_cols=154 Identities=10% Similarity=0.014 Sum_probs=106.2
Q ss_pred CeeEEEecCCCCcEEEEEe------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeE
Q 020480 127 EVNRARYMPQNPFLIATKT------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHL 194 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l 194 (325)
.+..++|+|++ +.++++. .++.|.+||+.. ...+..+.. ...+.+++|+|++. .+
T Consensus 83 ~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~----------~~~~~~~~~-~~~~~~~~~s~dg~-~l 149 (337)
T 1pby_B 83 SLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAET----------LSRRKAFEA-PRQITMLAWARDGS-KL 149 (337)
T ss_dssp CTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTT----------TEEEEEEEC-CSSCCCEEECTTSS-CE
T ss_pred cccceEECCCC-CEEEEEecccccccccccccCceEEEEECCC----------CcEEEEEeC-CCCcceeEECCCCC-EE
Confidence 67889999998 5666664 579999999976 223344443 45678899999998 56
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcc------cc------------------------------------------eEe----
Q 020480 195 LSGSDDAQICLWDINAAPKNKSL------EA------------------------------------------MQI---- 222 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~------~~------------------------------------------~~~---- 222 (325)
+++ ++.|.+||+.++.....+ .+ +..
T Consensus 150 ~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 227 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLE 227 (337)
T ss_dssp EEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETT
T ss_pred EEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCC
Confidence 666 688999998765321000 00 001
Q ss_pred --------eecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCC
Q 020480 223 --------FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDT 292 (325)
Q Consensus 223 --------~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d 292 (325)
+..+...+.+++|+|++ .+++++ ++.|++||+.+++. +..+. ....+.+++|+|+|+. +++.+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~~---~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 300 (337)
T 1pby_B 228 TGEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNAS---IKRVP-LPHSYYSVNVSTDGSTVWLGGAL 300 (337)
T ss_dssp TCCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTEE---EEEEE-CSSCCCEEEECTTSCEEEEESBS
T ss_pred CCCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCcC---cceec-CCCceeeEEECCCCCEEEEEcCC
Confidence 11223346679999997 466666 79999999988763 45544 3456889999999983 56778
Q ss_pred ceEEeeecce
Q 020480 293 CTCTHRHSRY 302 (325)
Q Consensus 293 ~~~~~~~~~~ 302 (325)
+.+.+|+...
T Consensus 301 ~~i~v~d~~~ 310 (337)
T 1pby_B 301 GDLAAYDAET 310 (337)
T ss_dssp SEEEEEETTT
T ss_pred CcEEEEECcC
Confidence 8999998753
No 149
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.43 E-value=5.8e-11 Score=103.84 Aligned_cols=203 Identities=13% Similarity=0.047 Sum_probs=131.8
Q ss_pred eEEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEeccCCCeeEEEecCCCCcEEE
Q 020480 63 VQKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQINHDGEVNRARYMPQNPFLIA 142 (325)
Q Consensus 63 ~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~~la 142 (325)
...+++|+.+.. ....|.++.+.. ..+.+...... +...+..++|+|++ ++|+
T Consensus 13 ~~~~~vg~y~~~-~~~~i~~~~~d~------------------------~~g~~~~~~~~-~~~~p~~l~~spdg-~~l~ 65 (361)
T 3scy_A 13 ELTMLVGTYTSG-NSKGIYTFRFNE------------------------ETGESLPLSDA-EVANPSYLIPSADG-KFVY 65 (361)
T ss_dssp EEEEEEEECCSS-SCCEEEEEEEET------------------------TTCCEEEEEEE-ECSCCCSEEECTTS-SEEE
T ss_pred ceEEEEEeccCC-CCCCEEEEEEeC------------------------CCCCEEEeecc-cCCCCceEEECCCC-CEEE
Confidence 467889998653 456899998862 23455555555 77888899999999 5777
Q ss_pred EEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe-CCCcEEEEeCCCCCCCCcc
Q 020480 143 TKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDAQICLWDINAAPKNKSL 217 (325)
Q Consensus 143 ~g~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s-~dg~i~iwd~~~~~~~~~~ 217 (325)
+++.+ +.|.+|++... .+....+.....+......+++ ++. .+++++ .++.|.+|++........+
T Consensus 66 ~~~~~~~~~~~v~~~~~~~~------~g~~~~~~~~~~~~~~p~~~~~--dg~-~l~~~~~~~~~v~~~~~~~~g~~~~~ 136 (361)
T 3scy_A 66 SVNEFSKDQAAVSAFAFDKE------KGTLHLLNTQKTMGADPCYLTT--NGK-NIVTANYSGGSITVFPIGQDGALLPA 136 (361)
T ss_dssp EEECCSSTTCEEEEEEEETT------TTEEEEEEEEECSSSCEEEEEE--CSS-EEEEEETTTTEEEEEEBCTTSCBCSC
T ss_pred EEEccCCCCCcEEEEEEeCC------CCcEEEeeEeccCCCCcEEEEE--CCC-EEEEEECCCCEEEEEEeCCCCcCccc
Confidence 77665 89999988651 0112233344445567788888 666 455544 6899999999754322111
Q ss_pred cceEeeec--------CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC------CCC----eeEeeccCCCeeEE
Q 020480 218 EAMQIFKV--------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV------SKP----VQSVVAHQSEVGVS 279 (325)
Q Consensus 218 ~~~~~~~~--------~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~------~~~----~~~~~~h~~~v~~i 279 (325)
.......+ +...+.+++|+|++..+++++..++.|++|++..... ... ......+...+.++
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 216 (361)
T 3scy_A 137 SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHL 216 (361)
T ss_dssp SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEE
T ss_pred ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEE
Confidence 11111111 1234688999999865666666789999999886441 100 01122345567899
Q ss_pred EeCCCCCc---cCCCCceEEeeecc
Q 020480 280 ILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 280 ~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
+|+|+|++ +...++.+.+|++.
T Consensus 217 ~~spdg~~l~v~~~~~~~v~v~~~~ 241 (361)
T 3scy_A 217 IFNSDGKFAYLINEIGGTVIAFRYA 241 (361)
T ss_dssp EECTTSSEEEEEETTTCEEEEEEEE
T ss_pred EEcCCCCEEEEEcCCCCeEEEEEec
Confidence 99999983 34468889999865
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.41 E-value=2.5e-13 Score=126.84 Aligned_cols=148 Identities=10% Similarity=0.041 Sum_probs=110.0
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC----Cc
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD----AQ 202 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d----g~ 202 (325)
.+...+|+|++..++++.+.++.+.+||+.. +. ...+..+.. .+++|+|+|. ++++++.+ +.
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~--------g~---~~~l~~~~~--~~~~~spDG~-~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDG--------GG---LRELARLPG--FGFVSDIRGD-LIAGLGFFGGGRVS 176 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEET--------TE---EEEEEEESS--CEEEEEEETT-EEEEEEEEETTEEE
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccC--------Cc---EEEeecCCC--ceEEECCCCC-EEEEEEEcCCCCeE
Confidence 3446688888755444444455566999876 22 223333333 7899999999 78877776 78
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC--cEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
|++||+.++. ...+..|...+..++|+|+| ..|+++..++ .|++||+.+++. . .+..|...+..++
T Consensus 177 i~~~d~~~g~-------~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~~d~~~~~~---~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 177 LFTSNLSSGG-------LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVTVDPRDGSV---E-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEETTTCC-------CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEEECTTTCCE---E-ECCCSCSHHHHHC
T ss_pred EEEEcCCCCC-------ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEEEcCCCCcE---E-EccCCCcChhhhh
Confidence 9999998763 33567788889999999998 5777888888 899999998773 3 5566777777777
Q ss_pred --------eCCCCCc--cCCCCceEEeeec
Q 020480 281 --------LNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 281 --------~~p~~~~--~~~~d~~~~~~~~ 300 (325)
|+|+|.+ +++.++++++|.+
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999975 6778899999986
No 151
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.39 E-value=6.3e-12 Score=119.89 Aligned_cols=166 Identities=9% Similarity=0.056 Sum_probs=110.8
Q ss_pred EEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--------------CceEEEE
Q 020480 120 QQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--------------TEGYGLS 185 (325)
Q Consensus 120 ~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~--------------~~v~~l~ 185 (325)
....+.+.+..++|+|+| +.||++ .++.|++|++...... ..........+. ..+.++.
T Consensus 115 ~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~-----~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~ 187 (706)
T 2z3z_A 115 YLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEG-----MSRAIAVTIDGTETLVYGQAVHQREFGIEKGTF 187 (706)
T ss_dssp EEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSC-----CCCCEESCSCCBTTEEESSCCGGGCTTCCCSEE
T ss_pred EccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCccccc-----CCCcEEeccCCCCCeEcccchhhhhcCCCceEE
Confidence 345677789999999999 577774 6899999998750000 001111111122 2257899
Q ss_pred ecCCCCCeEEEEe---------------------------------CCCcEEEEeCCCCCCCCcccceEeeecCCccEEE
Q 020480 186 WSKFKEGHLLSGS---------------------------------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED 232 (325)
Q Consensus 186 ~~p~~~~~l~s~s---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~ 232 (325)
|+|++. .|++++ .+..|++||+.++.. ..+.....|...+.+
T Consensus 188 ~SpDg~-~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~----~~~~~~~~~~~~~~~ 262 (706)
T 2z3z_A 188 WSPKGS-CLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKT----VYLQTGEPKEKFLTN 262 (706)
T ss_dssp ECTTSS-EEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEE----EECCCCSCTTCEEEE
T ss_pred ECCCCC-EEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCce----EeeccCCCCceeEee
Confidence 999999 788877 457799999987632 111111246678999
Q ss_pred EEeecCCCcEEEEEecCC-----cEEEEEccCCCCCCCeeEee--ccCC---CeeEEEeCC--CCCc--cCCCCceEEee
Q 020480 233 VAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPSVSKPVQSVV--AHQS---EVGVSILNA--SFRL--SHEDTCTCTHR 298 (325)
Q Consensus 233 v~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~--~h~~---~v~~i~~~p--~~~~--~~~~d~~~~~~ 298 (325)
++|+|++ ..|++++.++ .|++||+.+++. ...+. .+.. .+.+++|+| +|++ +++.++..++|
T Consensus 263 ~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~g~~---~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~ 338 (706)
T 2z3z_A 263 LSWSPDE-NILYVAEVNRAQNECKVNAYDAETGRF---VRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLY 338 (706)
T ss_dssp EEECTTS-SEEEEEEECTTSCEEEEEEEETTTCCE---EEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEE
T ss_pred EEEECCC-CEEEEEEeCCCCCeeEEEEEECCCCce---eeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEE
Confidence 9999998 5777777665 899999998842 33332 2222 347789999 9985 56677888888
Q ss_pred ecc
Q 020480 299 HSR 301 (325)
Q Consensus 299 ~~~ 301 (325)
.+.
T Consensus 339 ~~~ 341 (706)
T 2z3z_A 339 LYD 341 (706)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.37 E-value=1.7e-11 Score=106.23 Aligned_cols=155 Identities=9% Similarity=-0.010 Sum_probs=102.7
Q ss_pred CeeEEEecCCCCcEEEEEecC------------CeEEEEeCCCCCCCCCCCCC-CCCcEEEecCCCceEEEEecCCCCCe
Q 020480 127 EVNRARYMPQNPFLIATKTVS------------AEVYVFDYSKHPSKPPLDGA-CSPDLRLRGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~d------------g~v~vwd~~~~~~~~~~~~~-~~~~~~~~~h~~~v~~l~~~p~~~~~ 193 (325)
.+..++|+|++ +.+++++.+ +.|.+||+.. +. ...+..+. +...+.+++|+|++. +
T Consensus 93 ~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~--------~~~~~~~~~~~-~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 93 SMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTAD--------GLEAKPVRTFP-MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp CSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGG--------GGGBCCSEEEE-CCSSCCCEEECTTSC-E
T ss_pred cccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCC--------ccccceeeecc-CCCcccceeECCCCc-E
Confidence 37889999999 577776654 8999999875 21 12233343 334688999999998 5
Q ss_pred EEEEeCCCcEEEEeCCCCCCCCcccce--------------------------E--------------------------
Q 020480 194 LLSGSDDAQICLWDINAAPKNKSLEAM--------------------------Q-------------------------- 221 (325)
Q Consensus 194 l~s~s~dg~i~iwd~~~~~~~~~~~~~--------------------------~-------------------------- 221 (325)
++ ++ +.|.+||+.++.....+..- .
T Consensus 162 ~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 238 (349)
T 1jmx_B 162 YV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSV 238 (349)
T ss_dssp EE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEE
T ss_pred EE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEE
Confidence 55 43 34999999876421100000 0
Q ss_pred ----------eeecCCccEEEEEeec-CCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--c
Q 020480 222 ----------IFKVHEGVVEDVAWHL-RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--S 288 (325)
Q Consensus 222 ----------~~~~~~~~v~~v~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~ 288 (325)
.+..+...+..++|+| ++ .+++++ ++.|.+||+.+++. +..+. ....+.+++|+|+|+. +
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~---~~~~~-~~~~~~~~~~s~dg~~l~~ 311 (349)
T 1jmx_B 239 DLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKL---IKAAN-LDHTYYCVAFDKKGDKLYL 311 (349)
T ss_dssp ETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEE---EEEEE-CSSCCCEEEECSSSSCEEE
T ss_pred eccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeE---EEEEc-CCCCccceEECCCCCEEEE
Confidence 0000112456778889 87 466666 88999999998763 45544 3445789999999873 5
Q ss_pred CCCCceEEeeecce
Q 020480 289 HEDTCTCTHRHSRY 302 (325)
Q Consensus 289 ~~~d~~~~~~~~~~ 302 (325)
++.++.+.+|+...
T Consensus 312 ~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 312 GGTFNDLAVFNPDT 325 (349)
T ss_dssp ESBSSEEEEEETTT
T ss_pred ecCCCeEEEEeccc
Confidence 66778999998754
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.35 E-value=4.7e-11 Score=104.41 Aligned_cols=164 Identities=10% Similarity=0.070 Sum_probs=104.3
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCC-CCC----cEEEecCCCceEEEEecCCCCCeEEEEe-CCC
Q 020480 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGA-CSP----DLRLRGHSTEGYGLSWSKFKEGHLLSGS-DDA 201 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~-~~~----~~~~~~h~~~v~~l~~~p~~~~~l~s~s-~dg 201 (325)
+.+++|+|++..+++++..++.|.+|++........ .. ... ......+......++|+|++. ++++++ .++
T Consensus 157 ~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~ 233 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN--KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK-FAYLINEIGG 233 (361)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT--CCCCEEEEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTC
T ss_pred ceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc--ccceeecccccceecCCCCCCeEEEEcCCCC-EEEEEcCCCC
Confidence 477999999954566666689999999875110000 00 000 111223445678999999998 555555 789
Q ss_pred cEEEEeCCCCCCCCcccceEee---ecCCccEEEEEeecCCCcEEEEEec-CCcEEEEEccC--CCCCCCeeEeeccCCC
Q 020480 202 QICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRT--PSVSKPVQSVVAHQSE 275 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~~~~~l~s~~~-dg~i~iwd~~~--~~~~~~~~~~~~h~~~ 275 (325)
.|.+||+..+.. ..+..+ ..+......++|+|++..++++... ++.|.+|++.. +. ...+..+.. ...
T Consensus 234 ~v~v~~~~~g~~----~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-~~~~~~~~~-g~~ 307 (361)
T 3scy_A 234 TVIAFRYADGML----DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-LTKVGYQLT-GIH 307 (361)
T ss_dssp EEEEEEEETTEE----EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-EEEEEEEEC-SSC
T ss_pred eEEEEEecCCce----EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-EEEeeEecC-CCC
Confidence 999999985421 122222 2333557899999998544455555 68999999963 33 112333333 557
Q ss_pred eeEEEeCCCCCc---cCCCCceEEeeec
Q 020480 276 VGVSILNASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 276 v~~i~~~p~~~~---~~~~d~~~~~~~~ 300 (325)
+.+++|+|+|++ ....++.+.+|.+
T Consensus 308 ~~~~~~spdg~~l~~~~~~~~~v~v~~~ 335 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACRDTNVIQIFER 335 (361)
T ss_dssp CCEEEECTTSCEEEEEETTTTEEEEEEE
T ss_pred CceEEECCCCCEEEEEECCCCCEEEEEE
Confidence 889999999983 3346778888644
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.33 E-value=2.2e-11 Score=121.33 Aligned_cols=152 Identities=11% Similarity=0.029 Sum_probs=119.1
Q ss_pred cCCCeeEEEec-CCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC-ceEEEEecCCCCCeEEEEeCCC
Q 020480 124 HDGEVNRARYM-PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST-EGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 124 h~~~v~~v~~~-~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~~p~~~~~l~s~s~dg 201 (325)
|...+.+++|+ |+| +.+++++ ++.|.+|+... .....+..|.. .+..++|+ ++. .+++++.++
T Consensus 294 ~~~~v~~~~~S~pdG-~~la~~~-~~~i~~~~~~~-----------~~~~~~~~~~~~~~~~~~~s-dg~-~l~~~s~~~ 358 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDG-DLIAFVS-RGQAFIQDVSG-----------TYVLKVPEPLRIRYVRRGGD-TKV-AFIHGTREG 358 (1045)
T ss_dssp ECGGGGEEEEEECGG-GCEEEEE-TTEEEEECTTS-----------SBEEECSCCSCEEEEEECSS-SEE-EEEEEETTE
T ss_pred cccccceeeecCCCC-CEEEEEE-cCEEEEEcCCC-----------CceEEccCCCcceEEeeeEc-CCC-eEEEEECCC
Confidence 34479999999 998 6777766 78999999876 22344566777 89999999 887 788888888
Q ss_pred cEE-EEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 202 QIC-LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 202 ~i~-iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
.+. +||+..+. ...+.+|...+..++|+|++ ..|++++.++.|++||+.+++. ......|...+.+++
T Consensus 359 ~l~~~~d~~~~~-------~~~l~~~~~~~~~~~~SpDG-~~la~~~~~~~v~~~d~~tg~~---~~~~~~~~~~v~~~~ 427 (1045)
T 1k32_A 359 DFLGIYDYRTGK-------AEKFEENLGNVFAMGVDRNG-KFAVVANDRFEIMTVDLETGKP---TVIERSREAMITDFT 427 (1045)
T ss_dssp EEEEEEETTTCC-------EEECCCCCCSEEEEEECTTS-SEEEEEETTSEEEEEETTTCCE---EEEEECSSSCCCCEE
T ss_pred ceEEEEECCCCC-------ceEecCCccceeeeEECCCC-CEEEEECCCCeEEEEECCCCce---EEeccCCCCCccceE
Confidence 888 89987652 23344777889999999998 6888999999999999998873 455557889999999
Q ss_pred eCCCCCc--cCCC----------CceEEeeecc
Q 020480 281 LNASFRL--SHED----------TCTCTHRHSR 301 (325)
Q Consensus 281 ~~p~~~~--~~~~----------d~~~~~~~~~ 301 (325)
|+|+|+. .++. +..+++|++.
T Consensus 428 ~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 428 ISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp ECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred ECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 9999984 2222 3588888764
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.32 E-value=6.5e-11 Score=112.89 Aligned_cols=156 Identities=10% Similarity=0.084 Sum_probs=107.7
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCC-----eEEEEeCCCCCCCCCCCCCCCCcEEEe--cCCC---ceEEEEecC--CC
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSA-----EVYVFDYSKHPSKPPLDGACSPDLRLR--GHST---EGYGLSWSK--FK 190 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~---~v~~l~~~p--~~ 190 (325)
.|...+..++|+|+| +.|++++.++ .|++||+.+ +. ....+. .+.. .+..+.|+| ++
T Consensus 255 ~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v~~~d~~~--------g~--~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDE-NILYVAEVNRAQNECKVNAYDAET--------GR--FVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp CTTCEEEEEEECTTS-SEEEEEEECTTSCEEEEEEEETTT--------CC--EEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred CCceeEeeEEEECCC-CEEEEEEeCCCCCeeEEEEEECCC--------Cc--eeeEEEEccCCCeECccCCceeecCCCC
Confidence 466789999999999 6777777665 899999886 21 122221 2222 246789999 98
Q ss_pred CCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEE-EEeecCCCcEEEEEecCC----cEEEEEccCCCCCCC
Q 020480 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVED-VAWHLRHEYLFGSVGDDQ----YLLIWDLRTPSVSKP 265 (325)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-v~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~ 265 (325)
. ++++++.|+.++||++.... ..+..+..+...+.. ++|+|++..++++++.++ .|..||+.++.
T Consensus 324 ~-~l~~~~~~g~~~l~~~~~~~-----~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~---- 393 (706)
T 2z3z_A 324 Q-FIWQSRRDGWNHLYLYDTTG-----RLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK---- 393 (706)
T ss_dssp E-EEEEECTTSSCEEEEEETTS-----CEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC----
T ss_pred E-EEEEEccCCccEEEEEECCC-----CEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC----
Confidence 8 89999999999999886321 235566677777876 799999865666666665 56666666654
Q ss_pred eeEeeccCCCeeEEEeCCCCCc---cCCCC---ceEEeeec
Q 020480 266 VQSVVAHQSEVGVSILNASFRL---SHEDT---CTCTHRHS 300 (325)
Q Consensus 266 ~~~~~~h~~~v~~i~~~p~~~~---~~~~d---~~~~~~~~ 300 (325)
...+. |...+.+++|+|+|+. .++.+ ..+.+|+.
T Consensus 394 ~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 394 TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 33333 6677999999999984 22222 45777764
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.32 E-value=8.4e-11 Score=109.65 Aligned_cols=129 Identities=12% Similarity=-0.079 Sum_probs=103.0
Q ss_pred eEEEecCCCCcEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC--c
Q 020480 129 NRARYMPQNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--Q 202 (325)
Q Consensus 129 ~~v~~~~~~~~~la~g~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg--~ 202 (325)
.+++|+|+| +.||+++.+ +.|++||+.+ + ....+..|...+..++|+|+|. .|+++..++ .
T Consensus 153 ~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~--------g---~~~~l~~~~~~~~~~~~SpDG~-~l~~~~~~~~~~ 219 (582)
T 3o4h_A 153 FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSS--------G---GLRVFDSGEGSFSSASISPGMK-VTAGLETAREAR 219 (582)
T ss_dssp CEEEEEEET-TEEEEEEEEETTEEEEEEEETTT--------C---CCEEECCSSCEEEEEEECTTSC-EEEEEECSSCEE
T ss_pred ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCC--------C---CceEeecCCCccccceECCCCC-EEEEccCCCeeE
Confidence 889999999 688877766 7899999876 2 2446778888999999999999 788888898 8
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEE--------eecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVA--------WHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~--------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
|++||+.++. .. .+..|...+..++ |+|++ .++++++.++.+++|++ ++. .. ...+
T Consensus 220 i~~~d~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~---~~---~~~~ 283 (582)
T 3o4h_A 220 LVTVDPRDGS------VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GER---VE---APQG 283 (582)
T ss_dssp EEEECTTTCC------EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEE---EC---CCSS
T ss_pred EEEEcCCCCc------EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCe---ec---cCCC
Confidence 9999998763 23 5566666666666 99998 89999999999999999 432 22 2346
Q ss_pred CeeEEEeCCCCCc
Q 020480 275 EVGVSILNASFRL 287 (325)
Q Consensus 275 ~v~~i~~~p~~~~ 287 (325)
.+.+++|+ ++++
T Consensus 284 ~v~~~~~s-dg~~ 295 (582)
T 3o4h_A 284 NHGRVVLW-RGKL 295 (582)
T ss_dssp EEEEEEEE-TTEE
T ss_pred ceEEEEec-CCEE
Confidence 78899999 8875
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.30 E-value=2.1e-10 Score=100.64 Aligned_cols=195 Identities=10% Similarity=0.023 Sum_probs=121.6
Q ss_pred EEEEEEecCCCCCCCeEEEEEEECCCCCCCcccCCCCcccCCCCCCCCCCCceEEEEEe--ccCCCeeEEEecCCCCcEE
Q 020480 64 QKMILGTHTSENEPNYLMLAQVQLPLDDSENDARHYDDDRSDFGGFGCANGKVQIIQQI--NHDGEVNRARYMPQNPFLI 141 (325)
Q Consensus 64 ~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~~~~~~~~l 141 (325)
..+++|+.+.. ..|+++.+.. ..+.+...... .....+..++|+|++ ++|
T Consensus 3 ~~~~vg~~~~~---~~i~~~~~d~------------------------~~g~l~~~~~~~~~~~~~~~~~a~spdg-~~l 54 (365)
T 1jof_A 3 HHLMIGTWTPP---GAIFTVQFDD------------------------EKLTCKLIKRTEIPQDEPISWMTFDHER-KNI 54 (365)
T ss_dssp EEEEEEESSSS---CEEEEEEEET------------------------TTTEEEEEEEEECCTTCCCSEEEECTTS-SEE
T ss_pred EEEEEEEccCC---CcEEEEEEEC------------------------CCCCEEEeeEEccCCCCCCcEEEECCCC-CEE
Confidence 46778887542 3577776651 13445444333 244578899999999 677
Q ss_pred EEEecCCeEEEEeCC-CCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCC-eEEEEe-------------CCCcEEEE
Q 020480 142 ATKTVSAEVYVFDYS-KHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG-HLLSGS-------------DDAQICLW 206 (325)
Q Consensus 142 a~g~~dg~v~vwd~~-~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~-~l~s~s-------------~dg~i~iw 206 (325)
++++.+ .|.+|++. . +....+.....+ +.+..++|+|++.. ++++++ .+|.+.+|
T Consensus 55 ~~~~~~-~v~~~~~~~~--------g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~ 124 (365)
T 1jof_A 55 YGAAMK-KWSSFAVKSP--------TEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVF 124 (365)
T ss_dssp EEEEBT-EEEEEEEEET--------TEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEE
T ss_pred EEEccc-eEEEEEECCC--------CCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEE
Confidence 777777 99999986 4 211111112211 23566899999973 244553 68999999
Q ss_pred eCCCCCCCCcccceEeee-cCCccEEEEEeecCCCcEEEEEe-cCCcEEEEEcc-CCCCCCCeeEee--ccCCCeeEEEe
Q 020480 207 DINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLR-TPSVSKPVQSVV--AHQSEVGVSIL 281 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~-~~~~~~~~~~~~--~h~~~v~~i~~ 281 (325)
++...... ...+..+. .+...+.+++|+|++. +++++. .++.|++||+. +++. ..+..+. .|...+..++|
T Consensus 125 ~~~~~g~~--~~~~~~~~~~~~~~~~~~~~spdG~-~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~ 200 (365)
T 1jof_A 125 SVSETGKL--EKNVQNYEYQENTGIHGMVFDPTET-YLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAM 200 (365)
T ss_dssp EECTTCCE--EEEEEEEECCTTCCEEEEEECTTSS-EEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEE
T ss_pred ccCCCCcC--cceEeeEEeCCCCcceEEEECCCCC-EEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEE
Confidence 99742110 01111111 2456789999999985 555544 57899999998 5542 1122332 24567899999
Q ss_pred CCCCCc---cCCCCceEEeeec
Q 020480 282 NASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 282 ~p~~~~---~~~~d~~~~~~~~ 300 (325)
+|+|+. ....++++.+|+.
T Consensus 201 spdg~~l~v~~~~~~~v~v~~~ 222 (365)
T 1jof_A 201 HPTGNYLYALMEAGNRICEYVI 222 (365)
T ss_dssp CTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEE
Confidence 999974 3334678888754
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.27 E-value=5.1e-11 Score=103.19 Aligned_cols=152 Identities=7% Similarity=-0.088 Sum_probs=104.4
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceEEEEecCCCCCeEEEEeCCCcEEEEeC
Q 020480 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDI 208 (325)
Q Consensus 130 ~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~ 208 (325)
.+++++.+ .++++++.++.|++||+.+ .+.+..+..+. ..+..++|+|++..+++++..++.|.+||+
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~ 72 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVAS----------DTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDL 72 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTT----------TEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCC----------CcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeC
Confidence 34566766 7899999999999999976 23344454332 257899999999845566678899999999
Q ss_pred CCCCCCCcccceEeeec-C-----CccEEEEEeecCCCcEEEEEecC------------CcEEEEEccCCCCCCCeeEee
Q 020480 209 NAAPKNKSLEAMQIFKV-H-----EGVVEDVAWHLRHEYLFGSVGDD------------QYLLIWDLRTPSVSKPVQSVV 270 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~-~-----~~~v~~v~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~ 270 (325)
.++. ....+.. + ...+..++|+|++. .+++++.+ +.|.+||+.+++..+.+....
T Consensus 73 ~t~~------~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 145 (349)
T 1jmx_B 73 DTCK------NTFHANLSSVPGEVGRSMYSFAISPDGK-EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP 145 (349)
T ss_dssp TTTE------EEEEEESCCSTTEEEECSSCEEECTTSS-EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE
T ss_pred CCCc------EEEEEEcccccccccccccceEECCCCC-EEEEEcccccccccccccCCCeEEEEECCCccccceeeecc
Confidence 8763 3333332 2 22377899999984 66666654 899999998854322344443
Q ss_pred ccCCCeeEEEeCCCCCccCCCCceEEeeecc
Q 020480 271 AHQSEVGVSILNASFRLSHEDTCTCTHRHSR 301 (325)
Q Consensus 271 ~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~~ 301 (325)
+...+.+++|+|+|++... +..+.+|+..
T Consensus 146 -~~~~~~~~~~s~dg~l~~~-~~~i~~~d~~ 174 (349)
T 1jmx_B 146 -MPRQVYLMRAADDGSLYVA-GPDIYKMDVK 174 (349)
T ss_dssp -CCSSCCCEEECTTSCEEEE-SSSEEEECTT
T ss_pred -CCCcccceeECCCCcEEEc-cCcEEEEeCC
Confidence 3446889999999986221 2337777653
No 159
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.27 E-value=2.7e-11 Score=115.82 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=96.3
Q ss_pred CeeEEEecCCCCcEEEEEec---------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTV---------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~---------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 197 (325)
.+.+++|+|+| +.||+++. ++.|++||+.+ +.......+ ...+..++|+|+|. .|+.+
T Consensus 61 ~~~~~~~SpDg-~~la~~~~~~~~~~~s~~~~i~~~d~~~--------g~~~~~~~l---~~~~~~~~~SPDG~-~la~~ 127 (719)
T 1z68_A 61 NASNYGLSPDR-QFVYLESDYSKLWRYSYTATYYIYDLSN--------GEFVRGNEL---PRPIQYLCWSPVGS-KLAYV 127 (719)
T ss_dssp TCSEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTT--------TEECCSSCC---CSSBCCEEECSSTT-CEEEE
T ss_pred ceeeEEECCCC-CeEEEEecCceeEEeecceEEEEEECCC--------Cccccceec---CcccccceECCCCC-EEEEE
Confidence 48999999999 67877765 68999999987 222000111 24688999999999 68777
Q ss_pred eCCCcEEEEeCCCCCCCCcccceEeeecCCccE-----------------EEEEeecCCCcEEEEEecCC----------
Q 020480 198 SDDAQICLWDINAAPKNKSLEAMQIFKVHEGVV-----------------EDVAWHLRHEYLFGSVGDDQ---------- 250 (325)
Q Consensus 198 s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-----------------~~v~~~p~~~~~l~s~~~dg---------- 250 (325)
. ++.|++||+.++... .+ ...++...| .+++|+|+| ..||+++.|.
T Consensus 128 ~-~~~i~~~~~~~g~~~----~l-~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~ 200 (719)
T 1z68_A 128 Y-QNNIYLKQRPGDPPF----QI-TFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSY 200 (719)
T ss_dssp E-TTEEEEESSTTSCCE----EC-CCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEE
T ss_pred E-CCeEEEEeCCCCCcE----EE-ecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeec
Confidence 5 789999999876421 00 112222212 489999998 5777776542
Q ss_pred ------------------------cEEEEEccCCCCCC--Ce---eEeeccCCCeeEEEeCCCCCc
Q 020480 251 ------------------------YLLIWDLRTPSVSK--PV---QSVVAHQSEVGVSILNASFRL 287 (325)
Q Consensus 251 ------------------------~i~iwd~~~~~~~~--~~---~~~~~h~~~v~~i~~~p~~~~ 287 (325)
.|++||+.+++... .+ ..+.+|...+.+++|+|++++
T Consensus 201 ~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~ 266 (719)
T 1z68_A 201 YGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERV 266 (719)
T ss_dssp CCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEE
T ss_pred cCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeE
Confidence 78899998765200 00 122357778999999999875
No 160
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.23 E-value=2.5e-10 Score=98.19 Aligned_cols=114 Identities=14% Similarity=0.110 Sum_probs=83.0
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-C----CCceEEEEecCCCCCeEEEEe---
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-H----STEGYGLSWSKFKEGHLLSGS--- 198 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-h----~~~v~~l~~~p~~~~~l~s~s--- 198 (325)
.+..++|+|++..+++++..++.|.+||+.. .+.+..+.. + ...+..++|+|++. .+++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~ 103 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVT----------GETLGRIDLSTPEERVKSLFGAALSPDGK-TLAIYESPV 103 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTT----------CCEEEEEECCBTTEEEECTTCEEECTTSS-EEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCC----------CCeEeeEEcCCcccccccccceEECCCCC-EEEEEeccc
Confidence 5889999999865667777789999999976 233333432 1 12567899999998 677775
Q ss_pred ---------CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 199 ---------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 199 ---------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
.++.|.+||+.++ ..+..+.. ...+.+++|+|++. .++++ ++.|++||+.+++
T Consensus 104 ~~~~~~~~~~~~~i~v~d~~~~------~~~~~~~~-~~~~~~~~~s~dg~-~l~~~--~~~i~~~d~~~~~ 165 (337)
T 1pby_B 104 RLELTHFEVQPTRVALYDAETL------SRRKAFEA-PRQITMLAWARDGS-KLYGL--GRDLHVMDPEAGT 165 (337)
T ss_dssp EECSSCEEECCCEEEEEETTTT------EEEEEEEC-CSSCCCEEECTTSS-CEEEE--SSSEEEEETTTTE
T ss_pred ccccccccccCceEEEEECCCC------cEEEEEeC-CCCcceeEECCCCC-EEEEe--CCeEEEEECCCCc
Confidence 5799999999865 23444443 44578899999985 44455 6889999998754
No 161
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.20 E-value=2.1e-10 Score=100.65 Aligned_cols=151 Identities=11% Similarity=-0.033 Sum_probs=108.5
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCC-CCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPP-LDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
.++.+++++.. .++++|+.+ .+.+|++........ ......+.... .+.. |+.|+| ++. +|+++ .++.|++
T Consensus 39 ~~nlLais~~~-gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSK-SLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTT-TEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCC-CEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CCC-EEEEE-cCCcEEE
Confidence 58999999988 588888887 566698754210000 00112333333 4666 999999 676 78887 8899999
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASF 285 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~ 285 (325)
||++.... ......|...+.++.+.+. + +++++.||.|.+||+..... . . +...|+|++|+|+|
T Consensus 111 ~dv~sl~~------~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~---~-~---~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSE------FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST---K-Q---LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTC------EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE---E-E---EEESEEEEEECSSE
T ss_pred EEchhhhc------cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc---c-c---ccCCceEEEEcCCc
Confidence 99987642 3344566777888776643 3 88899999999999997762 2 2 45689999999999
Q ss_pred CccCCCCceEEeeecc
Q 020480 286 RLSHEDTCTCTHRHSR 301 (325)
Q Consensus 286 ~~~~~~d~~~~~~~~~ 301 (325)
...+..|+++++|+..
T Consensus 175 ~~vg~~dg~i~~~~~~ 190 (388)
T 1xip_A 175 LAVLLKDRSFQSFAWR 190 (388)
T ss_dssp EEEEETTSCEEEEEEE
T ss_pred eEEEEcCCcEEEEcCC
Confidence 7788889999998543
No 162
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.19 E-value=1.3e-09 Score=104.73 Aligned_cols=151 Identities=9% Similarity=0.079 Sum_probs=100.3
Q ss_pred eEEEecCCCCcEEEEEecC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 129 NRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 129 ~~v~~~~~~~~~la~g~~d---------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
..+.|+|+| +.|+.++.+ +.+.+||+.+ +.. ..+..|...+...+|||+|. .|+.+.
T Consensus 65 ~~~~~Spdg-~~l~~~~~~~~~~r~~~~~~~~~~d~~~--------~~~---~~l~~~~~~~~~~~~SPdG~-~la~~~- 130 (740)
T 4a5s_A 65 NDYSISPDG-QFILLEYNYVKQWRHSYTASYDIYDLNK--------RQL---ITEERIPNNTQWVTWSPVGH-KLAYVW- 130 (740)
T ss_dssp CEEEECTTS-SEEEEEEEEEECSSSCEEEEEEEEETTT--------TEE---CCSSCCCTTEEEEEECSSTT-CEEEEE-
T ss_pred cceEECCCC-CEEEEEECCeeeEEEccceEEEEEECCC--------CcE---EEcccCCCcceeeEECCCCC-EEEEEE-
Confidence 458899999 677877765 5677999987 322 23456777899999999999 677774
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccE-----------------EEEEeecCCCcEEEEEecCC------------
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVV-----------------EDVAWHLRHEYLFGSVGDDQ------------ 250 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v-----------------~~v~~~p~~~~~l~s~~~dg------------ 250 (325)
++.|++||+..+... .+ +..++...+ ..+.|+|+| ..||.++.|.
T Consensus 131 ~~~i~~~~~~~~~~~----~l-t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~ 204 (740)
T 4a5s_A 131 NNDIYVKIEPNLPSY----RI-TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYS 204 (740)
T ss_dssp TTEEEEESSTTSCCE----EC-CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECC
T ss_pred CCeEEEEECCCCceE----EE-cCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeec
Confidence 689999999876421 11 112222222 348999998 4666664322
Q ss_pred ------------------------cEEEEEccC---CCCCCCeeEee------ccCCCeeEEEeCCCCCc------cCCC
Q 020480 251 ------------------------YLLIWDLRT---PSVSKPVQSVV------AHQSEVGVSILNASFRL------SHED 291 (325)
Q Consensus 251 ------------------------~i~iwd~~~---~~~~~~~~~~~------~h~~~v~~i~~~p~~~~------~~~~ 291 (325)
.|++||+.+ +...+ ...+. +|...+..++|+|+|++ ..+.
T Consensus 205 ~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~ 283 (740)
T 4a5s_A 205 DESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNAT-SIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQN 283 (740)
T ss_dssp STTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCC-EEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTT
T ss_pred CCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcce-EEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCC
Confidence 477888887 63111 22332 26677899999999983 2234
Q ss_pred CceEEeeec
Q 020480 292 TCTCTHRHS 300 (325)
Q Consensus 292 d~~~~~~~~ 300 (325)
+..+.+|+.
T Consensus 284 ~~~i~~~d~ 292 (740)
T 4a5s_A 284 YSVMDICDY 292 (740)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEC
Confidence 456777764
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.18 E-value=2.5e-09 Score=93.70 Aligned_cols=163 Identities=9% Similarity=0.079 Sum_probs=103.9
Q ss_pred cCCCeeEEEecCCCCcEEEEEe-cCCeEEEEeCC-CCCCCCCCCCCCCCcEEEe--cCCCceEEEEecCCCCCeEEEEe-
Q 020480 124 HDGEVNRARYMPQNPFLIATKT-VSAEVYVFDYS-KHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEGHLLSGS- 198 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~-~dg~v~vwd~~-~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s~s- 198 (325)
+...+.+++|+|+| ++++++. .++.|++|++. . +....+..+. .|...+..++|+|++. ++++++
T Consensus 143 ~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~--------g~~~~~~~~~~~~~g~~p~~~~~spdg~-~l~v~~~ 212 (365)
T 1jof_A 143 ENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLAS--------GEVELVGSVDAPDPGDHPRWVAMHPTGN-YLYALME 212 (365)
T ss_dssp TTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTT--------SCEEEEEEEECSSTTCCEEEEEECTTSS-EEEEEET
T ss_pred CCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCC--------CCEEEeeeEecCCCCCCCCEeEECCCCC-EEEEEEC
Confidence 45689999999999 4555544 46799999987 4 2222223333 2456789999999998 566655
Q ss_pred CCCcEEEEeCCCCCCCCc--ccceEeee----cCCc------cEEEEE-eecCCCcEEEEEe-cCC-----cEEEEEcc-
Q 020480 199 DDAQICLWDINAAPKNKS--LEAMQIFK----VHEG------VVEDVA-WHLRHEYLFGSVG-DDQ-----YLLIWDLR- 258 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~--~~~~~~~~----~~~~------~v~~v~-~~p~~~~~l~s~~-~dg-----~i~iwd~~- 258 (325)
.++.|.+|++........ ...+..+. +|.. .+..++ |+|++. +|++++ .+. .|.+|++.
T Consensus 213 ~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~ 291 (365)
T 1jof_A 213 AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRD 291 (365)
T ss_dssp TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECT
T ss_pred CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECC
Confidence 578999998763211000 00111121 2222 588999 999985 444444 333 89999997
Q ss_pred CCCCCCCeeE----eeccCCCeeEEEeCC---CCCc--cCC-CCceEEeeecc
Q 020480 259 TPSVSKPVQS----VVAHQSEVGVSILNA---SFRL--SHE-DTCTCTHRHSR 301 (325)
Q Consensus 259 ~~~~~~~~~~----~~~h~~~v~~i~~~p---~~~~--~~~-~d~~~~~~~~~ 301 (325)
+++ +.. ...+...+..++|+| +|++ +++ .++++.+|++.
T Consensus 292 ~g~----~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 292 CGS----IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp TSC----EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred CCC----EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 333 322 333555678899999 7874 444 45889998764
No 164
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.17 E-value=8.9e-10 Score=96.67 Aligned_cols=135 Identities=7% Similarity=0.002 Sum_probs=102.5
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
...+++ |+.++| ++ ..|+++ .++.|++||+.. .........|...+.++.+.+. .+++++.|
T Consensus 84 ~~~lp~-V~~l~f--d~-~~L~v~-~~~~l~v~dv~s----------l~~~~~~~~~~~~v~~i~~~~p---~~av~~~d 145 (388)
T 1xip_A 84 EKEIPD-VIFVCF--HG-DQVLVS-TRNALYSLDLEE----------LSEFRTVTSFEKPVFQLKNVNN---TLVILNSV 145 (388)
T ss_dssp EEECTT-EEEEEE--ET-TEEEEE-ESSEEEEEESSS----------TTCEEEEEECSSCEEEEEECSS---EEEEEETT
T ss_pred EeeCCC-eeEEEE--CC-CEEEEE-cCCcEEEEEchh----------hhccCccceeecceeeEEecCC---CEEEEECC
Confidence 345777 999999 56 688887 889999999987 2223455677788888887654 38889999
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe------e---c
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV------V---A 271 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~------~---~ 271 (325)
|.|.+||+..+.. . .+...|.+++|+|+| ++.|..||.+++|+....... +..++ . +
T Consensus 146 G~L~v~dl~~~~~------~----~~~~~Vs~v~WSpkG---~~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~ 211 (388)
T 1xip_A 146 NDLSALDLRTKST------K----QLAQNVTSFDVTNSQ---LAVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPV 211 (388)
T ss_dssp SEEEEEETTTCCE------E----EEEESEEEEEECSSE---EEEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCT
T ss_pred CCEEEEEccCCcc------c----cccCCceEEEEcCCc---eEEEEcCCcEEEEcCCCcccc-ccceecCCcccccccC
Confidence 9999999986532 1 134579999999987 678999999999988776510 01233 2 3
Q ss_pred cCCCeeEEEeCCCCCc
Q 020480 272 HQSEVGVSILNASFRL 287 (325)
Q Consensus 272 h~~~v~~i~~~p~~~~ 287 (325)
|...|.+|.|.+++.+
T Consensus 212 ~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 212 EEYSPLSVTILSPQDF 227 (388)
T ss_dssp TTSEEEEEEESSSSEE
T ss_pred CCeeEEEEEEecCCeE
Confidence 6788999999998884
No 165
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.16 E-value=4e-09 Score=88.89 Aligned_cols=152 Identities=8% Similarity=-0.011 Sum_probs=111.1
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--cCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
+...+..+++.+++ +++++...++.|.+|+... ..+..+. .+...+.++++++++. ++++...++
T Consensus 119 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-----------~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~ 185 (286)
T 1q7f_A 119 ILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG-----------NVLHKFGCSKHLEFPNGVVVNDKQE-IFISDNRAH 185 (286)
T ss_dssp TCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS-----------CEEEEEECTTTCSSEEEEEECSSSE-EEEEEGGGT
T ss_pred cCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCC-----------CEEEEeCCCCccCCcEEEEECCCCC-EEEEECCCC
Confidence 34578899999988 6888877889999999654 2233343 3455789999999987 788888899
Q ss_pred cEEEEeCCCCCCCCcccceEeeecC--CccEEEEEeecCCCcEEEEEecCC-cEEEEEccCCCCCCCeeEeeccCC--Ce
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVH--EGVVEDVAWHLRHEYLFGSVGDDQ-YLLIWDLRTPSVSKPVQSVVAHQS--EV 276 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~h~~--~v 276 (325)
.|++||.... .+..+..+ ...+..++++|++ +++++...++ .|++||.. ++ .+..+..+.. .+
T Consensus 186 ~i~~~~~~g~-------~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~-g~---~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 186 CVKVFNYEGQ-------YLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD-GQ---LISALESKVKHAQC 253 (286)
T ss_dssp EEEEEETTCC-------EEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT-SC---EEEEEEESSCCSCE
T ss_pred EEEEEcCCCC-------EEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-CC---EEEEEcccCCCCcc
Confidence 9999997532 23444332 3578899999987 6888887776 99999954 33 2555544433 47
Q ss_pred eEEEeCCCCCc-cCCCCceEEeeec
Q 020480 277 GVSILNASFRL-SHEDTCTCTHRHS 300 (325)
Q Consensus 277 ~~i~~~p~~~~-~~~~d~~~~~~~~ 300 (325)
.+++++|+|.+ .++.++++++|+.
T Consensus 254 ~~i~~~~~g~l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 254 FDVALMDDGSVVLASKDYRLYIYRY 278 (286)
T ss_dssp EEEEEETTTEEEEEETTTEEEEEEC
T ss_pred eeEEECCCCcEEEECCCCeEEEEEc
Confidence 79999999986 3356788888864
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.14 E-value=6.6e-11 Score=113.12 Aligned_cols=133 Identities=8% Similarity=0.110 Sum_probs=92.5
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCC---ceEEEEecCCCCCeEEEEeC-------
Q 020480 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHST---EGYGLSWSKFKEGHLLSGSD------- 199 (325)
Q Consensus 130 ~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~~p~~~~~l~s~s~------- 199 (325)
.++|+|++ .++++ +.|+.|++||+.. + .....+.+|.. .+.+++|+|+|. +|++++.
T Consensus 20 ~~~~s~dg-~~~~~-~~d~~i~~~~~~~--------g--~~~~~~~~~~~~~~~~~~~~~SpDg~-~la~~~~~~~~~~~ 86 (719)
T 1z68_A 20 FPNWISGQ-EYLHQ-SADNNIVLYNIET--------G--QSYTILSNRTMKSVNASNYGLSPDRQ-FVYLESDYSKLWRY 86 (719)
T ss_dssp CCEESSSS-EEEEE-CTTSCEEEEESSS--------C--CEEEEECHHHHHTTTCSEEEECTTSS-EEEEEEEEEECSSS
T ss_pred ccEECCCC-eEEEE-cCCCCEEEEEcCC--------C--cEEEEEccccccccceeeEEECCCCC-eEEEEecCceeEEe
Confidence 67899998 56555 5699999999987 2 22333434432 388999999999 7888776
Q ss_pred --CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccCCCe
Q 020480 200 --DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEV 276 (325)
Q Consensus 200 --dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v 276 (325)
++.|++||+.++.... ...+ ...+..++|+|+|. .||++. ++.|++||+.+++. .... .++...|
T Consensus 87 s~~~~i~~~d~~~g~~~~----~~~l---~~~~~~~~~SPDG~-~la~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~v 154 (719)
T 1z68_A 87 SYTATYYIYDLSNGEFVR----GNEL---PRPIQYLCWSPVGS-KLAYVY-QNNIYLKQRPGDPP---FQITFNGRENKI 154 (719)
T ss_dssp CEEEEEEEEETTTTEECC----SSCC---CSSBCCEEECSSTT-CEEEEE-TTEEEEESSTTSCC---EECCCCCBTTTE
T ss_pred ecceEEEEEECCCCcccc----ceec---CcccccceECCCCC-EEEEEE-CCeEEEEeCCCCCc---EEEecCCCcCCe
Confidence 7899999998763200 0111 24588899999984 666664 78999999988763 2211 2222222
Q ss_pred -----------------eEEEeCCCCCc
Q 020480 277 -----------------GVSILNASFRL 287 (325)
Q Consensus 277 -----------------~~i~~~p~~~~ 287 (325)
.+++|+|+|+.
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~ 182 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKF 182 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSE
T ss_pred EcccccceeeeecccCcccEEECCCCCE
Confidence 58999999984
No 167
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.06 E-value=2.8e-08 Score=85.79 Aligned_cols=156 Identities=10% Similarity=0.006 Sum_probs=110.6
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE---------ecCCCceEEEEecC-CCCCe
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL---------RGHSTEGYGLSWSK-FKEGH 193 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~~p-~~~~~ 193 (325)
+-.....++++++| +++++...++.|++|+... ....+..+ .++......++++| ++. +
T Consensus 89 ~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g---------~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-l 157 (329)
T 3fvz_A 89 LFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHS---------KEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-V 157 (329)
T ss_dssp TCSSEEEEEECTTS-CEEEEETTTTEEEEECTTC---------SSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-E
T ss_pred ccCCceEEEECCCC-CEEEEECCCCEEEEEeCCC---------CeEEEEEecccCCCCCCccccCCCcEEEEeCCCCe-E
Confidence 44578899999998 5888888899999999865 11234444 23445789999999 666 7
Q ss_pred EEEEe-CCCcEEEEeCCCCCCCCcccceEeeec----------CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC
Q 020480 194 LLSGS-DDAQICLWDINAAPKNKSLEAMQIFKV----------HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 194 l~s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~----------~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
+++.+ .++.|++||.. + ..+..+.. +-.....++++|++..++++...++.|++||..+++.
T Consensus 158 yv~d~~~~~~I~~~~~~-g------~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~ 230 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPS-G------KFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEF 230 (329)
T ss_dssp EEEECSSCCEEEEECTT-S------CEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEeCCCCCeEEEEcCC-C------CEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcE
Confidence 77776 69999999954 3 22333322 1234889999998557888888999999999987663
Q ss_pred CCCeeEe--eccCCCeeEEEeCC------CCCc--cCCCCceEEeeec
Q 020480 263 SKPVQSV--VAHQSEVGVSILNA------SFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 263 ~~~~~~~--~~h~~~v~~i~~~p------~~~~--~~~~d~~~~~~~~ 300 (325)
+..+ ..+...+.+++|+| +|.+ +.....++.+|+.
T Consensus 231 ---~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~ 275 (329)
T 3fvz_A 231 ---VREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNF 275 (329)
T ss_dssp ---EEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEET
T ss_pred ---EEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEc
Confidence 5555 34566788999999 5543 3334446666653
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.03 E-value=1.2e-09 Score=104.95 Aligned_cols=136 Identities=10% Similarity=0.064 Sum_probs=96.6
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc-----eEEEEecCCCCCeEEEEeCC
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-----GYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~~p~~~~~l~s~s~d 200 (325)
.....++|+|++ .+++++ ||.|++|++.+ +. ....+.+|... ..++.|+|++. .|+.++.+
T Consensus 17 ~~~~~~~w~~dg-~~~~~~--~~~i~~~~~~~--------~~--~~~~~~~~~~~~~~~~~~~~~~Spdg~-~l~~~~~~ 82 (740)
T 4a5s_A 17 LKLYSLRWISDH-EYLYKQ--ENNILVFNAEY--------GN--SSVFLENSTFDEFGHSINDYSISPDGQ-FILLEYNY 82 (740)
T ss_dssp CCCCCEEECSSS-EEEEEE--TTEEEEEETTT--------CC--EEEEECTTTTTTCCSCCCEEEECTTSS-EEEEEEEE
T ss_pred ccccccEECCCC-cEEEEc--CCcEEEEECCC--------Cc--eEEEEechhhhhhcccccceEECCCCC-EEEEEECC
Confidence 345688999998 688885 89999999987 32 23345555532 24588999999 78888776
Q ss_pred ---------CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCee-Eee
Q 020480 201 ---------AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQ-SVV 270 (325)
Q Consensus 201 ---------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~ 270 (325)
+.+.+||+.++. ...+..+...+...+|||+|. .||.+ .++.|++||+.++.. .. +..
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~-------~~~l~~~~~~~~~~~~SPdG~-~la~~-~~~~i~~~~~~~~~~---~~lt~~ 150 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQ-------LITEERIPNNTQWVTWSPVGH-KLAYV-WNNDIYVKIEPNLPS---YRITWT 150 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTE-------ECCSSCCCTTEEEEEECSSTT-CEEEE-ETTEEEEESSTTSCC---EECCSC
T ss_pred eeeEEEccceEEEEEECCCCc-------EEEcccCCCcceeeEECCCCC-EEEEE-ECCeEEEEECCCCce---EEEcCC
Confidence 567799999863 223556677899999999984 66666 578999999988763 21 112
Q ss_pred ccCCC-----------------eeEEEeCCCCCc
Q 020480 271 AHQSE-----------------VGVSILNASFRL 287 (325)
Q Consensus 271 ~h~~~-----------------v~~i~~~p~~~~ 287 (325)
++... ...+.|||+|+.
T Consensus 151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~ 184 (740)
T 4a5s_A 151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTF 184 (740)
T ss_dssp CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSE
T ss_pred CCccceecCcccccccchhcCCCcceEECCCCCE
Confidence 22222 245899999984
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.01 E-value=2.2e-09 Score=101.56 Aligned_cols=160 Identities=9% Similarity=-0.052 Sum_probs=104.0
Q ss_pred cCCCeeEEEecCCCCcEEEEEecC----------CeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCC
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVS----------AEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEG 192 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~d----------g~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~ 192 (325)
|...+..++|+|+| +.|++++.+ ..|++|++...... .......+. .+...+..++|+|+|.
T Consensus 128 ~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-----~~~~~~~l~~~~~~~~~~~~~SpDG~- 200 (662)
T 3azo_A 128 GGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA-----DRSAVRELSDDAHRFVTGPRLSPDGR- 200 (662)
T ss_dssp TCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT-----CGGGSEESSCSCSSEECCCEECTTSS-
T ss_pred CCccccCcEECCCC-CEEEEEEecccCCCCCCceeEEEEEECCCCccc-----cCCceeEEEecCCCcccCceECCCCC-
Confidence 45678899999999 577777766 58999998651000 001133444 5566788899999999
Q ss_pred eEEEEeCC--------CcEEEEeCC-CCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCc--EEEEEccCCC
Q 020480 193 HLLSGSDD--------AQICLWDIN-AAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQY--LLIWDLRTPS 261 (325)
Q Consensus 193 ~l~s~s~d--------g~i~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~--i~iwd~~~~~ 261 (325)
.|+.++.+ ..|++||+. .+... ........+...+..++|+|++. +++++..++. |.+||+.+++
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~---~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~~ 276 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFA---DTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATGA 276 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEECTTSCEE---EEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTCC
T ss_pred EEEEEECCCCCCCCCCcEEEEEEECCCCccc---ccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCCc
Confidence 77776644 379999998 33100 12223344567899999999986 8888888884 5555554444
Q ss_pred CCCCeeEe-eccCCC--------eeEEEeCCCCCc--cCCCCceEEeee
Q 020480 262 VSKPVQSV-VAHQSE--------VGVSILNASFRL--SHEDTCTCTHRH 299 (325)
Q Consensus 262 ~~~~~~~~-~~h~~~--------v~~i~~~p~~~~--~~~~d~~~~~~~ 299 (325)
...+ ..+... +.+++|+|++++ +++. +..++|.
T Consensus 277 ----~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 277 ----ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp ----EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred ----eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 2333 222211 567889998885 4445 7777773
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.98 E-value=9.3e-08 Score=82.26 Aligned_cols=158 Identities=8% Similarity=-0.012 Sum_probs=106.0
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD- 200 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d- 200 (325)
..+...+.+++|++++ ++++++..++.|.+|+... +.. ......+...+.+++|+|++. ++++...+
T Consensus 41 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~i~~~d~~~--------~~~--~~~~~~~~~~~~~i~~~~dg~-l~v~~~~~~ 108 (333)
T 2dg1_A 41 SKKGLQLEGLNFDRQG-QLFLLDVFEGNIFKINPET--------KEI--KRPFVSHKANPAAIKIHKDGR-LFVCYLGDF 108 (333)
T ss_dssp ESSCCCEEEEEECTTS-CEEEEETTTCEEEEECTTT--------CCE--EEEEECSSSSEEEEEECTTSC-EEEEECTTS
T ss_pred eccCccccCcEECCCC-CEEEEECCCCEEEEEeCCC--------CcE--EEEeeCCCCCcceEEECCCCc-EEEEeCCCC
Confidence 3466677899999988 5888888899999999876 221 222224567899999999987 77777666
Q ss_pred ---CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec------CCcEEEEEccCCCCCCCeeEeec
Q 020480 201 ---AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD------DQYLLIWDLRTPSVSKPVQSVVA 271 (325)
Q Consensus 201 ---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~ 271 (325)
+.|.+||...... ..+.....+...+.+++++|++ .++++... .+.|..+|..+.+ +..+..
T Consensus 109 ~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~ 179 (333)
T 2dg1_A 109 KSTGGIFAATENGDNL----QDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRT----VTPIIQ 179 (333)
T ss_dssp SSCCEEEEECTTSCSC----EEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCC----EEEEEE
T ss_pred CCCceEEEEeCCCCEE----EEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCE----EEEeec
Confidence 6899999886532 1011101234578999999987 56666543 2455555554443 333333
Q ss_pred cCCCeeEEEeCCCCC-c--cCCCCceEEeeec
Q 020480 272 HQSEVGVSILNASFR-L--SHEDTCTCTHRHS 300 (325)
Q Consensus 272 h~~~v~~i~~~p~~~-~--~~~~d~~~~~~~~ 300 (325)
....+..++|+|+|. + +...++.+..|+.
T Consensus 180 ~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~ 211 (333)
T 2dg1_A 180 NISVANGIALSTDEKVLWVTETTANRLHRIAL 211 (333)
T ss_dssp EESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred CCCcccceEECCCCCEEEEEeCCCCeEEEEEe
Confidence 445688999999987 3 3334567777765
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.98 E-value=5.9e-08 Score=83.69 Aligned_cols=156 Identities=15% Similarity=0.025 Sum_probs=110.3
Q ss_pred CCCeeEEEecCCCCcEEEEEecC------------------------CeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCC
Q 020480 125 DGEVNRARYMPQNPFLIATKTVS------------------------AEVYVFDYSKHPSKPPLDGACSPDLRLR-GHST 179 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~d------------------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~ 179 (325)
-+.+.+++++|+| +++++...+ +.|.+||..+ + +.+..+. ++..
T Consensus 23 l~~v~~va~d~~G-~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~--------g--~~~~~~~~~~~~ 91 (329)
T 3fvz_A 23 PGQVSGVALDSKN-NLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNN--------A--EILQSSGKNLFY 91 (329)
T ss_dssp CSCEEEEEECTTC-CEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTT--------C--CEEEEECTTTCS
T ss_pred cCCceEEEECCCC-CEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCC--------C--eEEeccCCCccC
Confidence 3678999999998 688887766 4799999875 2 2233332 3445
Q ss_pred ceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEee---------ecCCccEEEEEeecCCCcEEEEEe-cC
Q 020480 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF---------KVHEGVVEDVAWHLRHEYLFGSVG-DD 249 (325)
Q Consensus 180 ~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---------~~~~~~v~~v~~~p~~~~~l~s~~-~d 249 (325)
....++++|++. ++++...++.|++||...... .+..+ ..+-.....++++|++..++++.+ .+
T Consensus 92 ~p~gia~d~~g~-l~v~d~~~~~v~~~~~~g~~~-----~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~ 165 (329)
T 3fvz_A 92 LPHGLSIDTDGN-YWVTDVALHQVFKLDPHSKEG-----PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCN 165 (329)
T ss_dssp SEEEEEECTTSC-EEEEETTTTEEEEECTTCSSC-----CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSC
T ss_pred CceEEEECCCCC-EEEEECCCCEEEEEeCCCCeE-----EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCC
Confidence 789999999998 899988999999999864311 23333 234446889999994346888886 69
Q ss_pred CcEEEEEccCCCCCCCeeEeecc----------CCCeeEEEeCCC-CCc--cCCCCceEEeeecc
Q 020480 250 QYLLIWDLRTPSVSKPVQSVVAH----------QSEVGVSILNAS-FRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 250 g~i~iwd~~~~~~~~~~~~~~~h----------~~~v~~i~~~p~-~~~--~~~~d~~~~~~~~~ 301 (325)
+.|++||. .+. .+..+... -.....|+++|+ +.+ +...++.++.|+..
T Consensus 166 ~~I~~~~~-~g~---~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 166 SRIVQFSP-SGK---FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp CEEEEECT-TSC---EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CeEEEEcC-CCC---EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 99999994 444 24444322 234889999998 775 55567788888764
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.97 E-value=7.4e-08 Score=91.95 Aligned_cols=154 Identities=9% Similarity=-0.077 Sum_probs=97.9
Q ss_pred eeEEEecCCCCcEEEEEecCCe----------------EEEEeCCCCCCCCCCCCCCCCcEEEe--cCCCceEEEEecCC
Q 020480 128 VNRARYMPQNPFLIATKTVSAE----------------VYVFDYSKHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKF 189 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg~----------------v~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~ 189 (325)
+..++|+|+| +.|+.++.++. |++|++.+ +.......+. .|...+..+.|+|+
T Consensus 173 ~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t--------~~~~~~~v~~~~~~~~~~~~~~~SpD 243 (710)
T 2xdw_A 173 FSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGT--------DQSEDILCAEFPDEPKWMGGAELSDD 243 (710)
T ss_dssp SCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTS--------CGGGCEEEECCTTCTTCEEEEEECTT
T ss_pred cceEEEEeCC-CEEEEEEECCccccccccccccCCCCEEEEEECCC--------CcccceEEeccCCCCeEEEEEEEcCC
Confidence 6789999999 56776666655 99999976 2222222233 24556889999999
Q ss_pred CCCeEEEEeC-----CCcEEEEeCCC------CCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC---CcEEEE
Q 020480 190 KEGHLLSGSD-----DAQICLWDINA------APKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QYLLIW 255 (325)
Q Consensus 190 ~~~~l~s~s~-----dg~i~iwd~~~------~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d---g~i~iw 255 (325)
+. +|+.++. +..|++||+.. +.. ....+..+...+.. .|+|++..+++.+..+ +.|.+|
T Consensus 244 g~-~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~-----~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~ 316 (710)
T 2xdw_A 244 GR-YVLLSIREGCDPVNRLWYCDLQQESNGITGIL-----KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINI 316 (710)
T ss_dssp SC-EEEEEEECSSSSCCEEEEEEGGGSSSSSCSSC-----CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEE
T ss_pred CC-EEEEEEEccCCCccEEEEEECcccccccCCcc-----ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEE
Confidence 99 5665543 56899999976 321 23444555555544 4788876555555433 369999
Q ss_pred EccCCCCCCCeeEeeccCC--CeeEEEeCCCCCc--cCCCCceEEee
Q 020480 256 DLRTPSVSKPVQSVVAHQS--EVGVSILNASFRL--SHEDTCTCTHR 298 (325)
Q Consensus 256 d~~~~~~~~~~~~~~~h~~--~v~~i~~~p~~~~--~~~~d~~~~~~ 298 (325)
|+.+... .....+..|.. .+..++|++++.+ +...++..++|
T Consensus 317 d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 317 DFTDPEE-SKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp ETTSCCG-GGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred eCCCCCc-ccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 9887641 01344444543 6888999977664 45556655544
No 173
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.97 E-value=8e-09 Score=97.67 Aligned_cols=158 Identities=6% Similarity=-0.062 Sum_probs=97.5
Q ss_pred EEEec--CCCCcEEEEEe-cCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCceEEEEecCCCCCeEEEEeCC-
Q 020480 130 RARYM--PQNPFLIATKT-VSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSKFKEGHLLSGSDD- 200 (325)
Q Consensus 130 ~v~~~--~~~~~~la~g~-~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~p~~~~~l~s~s~d- 200 (325)
...|+ |+|..+|+.++ .+..|.++++... .......+.. |...+.+++|+|++. .|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~--------g~~~~~~l~~~~~~~~~~~~~~~~~spDg~-~l~~~~~~~ 151 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAP--------GGAVPRPLTPVSAVGGGLRWADPVLLPERG-EVWCMAEEF 151 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTST--------TCCCCEECSCCCCSTTCEEEEEEEEETTTT-EEEEEEEEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCC--------CCCCCEeccCCccCCCCccccCcEECCCCC-EEEEEEecc
Confidence 44555 88854155443 3567777776500 0011233444 567789999999999 78887766
Q ss_pred ---------CcEEEEeCCCCCCCCcccceEeee-cCCccEEEEEeecCCCcEEEEEecC--------CcEEEEEcc-CCC
Q 020480 201 ---------AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGDD--------QYLLIWDLR-TPS 261 (325)
Q Consensus 201 ---------g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~~d--------g~i~iwd~~-~~~ 261 (325)
..|++||+........-. ...+. .+...+..++|+|+| ..|+.++.+ ..|++||+. ++.
T Consensus 152 ~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 152 TGEGPSDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp CSSSTTCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred cCCCCCCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 589999998720000001 22334 455678889999998 566666644 379999998 452
Q ss_pred CCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEee
Q 020480 262 VSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHR 298 (325)
Q Consensus 262 ~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~ 298 (325)
..........|...+..++|+|+|++ +++.++..++|
T Consensus 230 ~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~ 268 (662)
T 3azo_A 230 FADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLH 268 (662)
T ss_dssp EEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEE
T ss_pred ccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEE
Confidence 00012333445778999999999985 55556644444
No 174
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.93 E-value=9.3e-09 Score=90.43 Aligned_cols=158 Identities=8% Similarity=0.066 Sum_probs=96.8
Q ss_pred eccCCCeeEEEecC-CCCcEEEEEecC------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--CceEEEEecCCCCC
Q 020480 122 INHDGEVNRARYMP-QNPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--TEGYGLSWSKFKEG 192 (325)
Q Consensus 122 ~~h~~~v~~v~~~~-~~~~~la~g~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~p~~~~ 192 (325)
..+...+..+.|+| ++ +.|+.+... ..|.+++... .....+..+. ..+....|+|++..
T Consensus 184 ~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~-----------~~~~~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 184 LQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDG-----------TNMRKVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp EEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTS-----------CCCEESCCCCTTEEEEEEEECTTSSC
T ss_pred ecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCC-----------CceEEeeeCCCCcccccceECCCCCE
Confidence 35667789999999 88 566665543 3788888765 1233344444 25778899999984
Q ss_pred eEEEEeCCC----cEEEEeCCCCCCCCcccceEeeecCCcc---EEEEEeecCCCcEEEEE--------ecCCcEEEEEc
Q 020480 193 HLLSGSDDA----QICLWDINAAPKNKSLEAMQIFKVHEGV---VEDVAWHLRHEYLFGSV--------GDDQYLLIWDL 257 (325)
Q Consensus 193 ~l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~---v~~v~~~p~~~~~l~s~--------~~dg~i~iwd~ 257 (325)
+++.+..++ .|++||+.++.. ..+..+.++... ...++|+|++..++++. ..+..|++||+
T Consensus 252 l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~ 327 (388)
T 3pe7_A 252 LVYVSYLKGSPDRFIYSADPETLEN----RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNM 327 (388)
T ss_dssp EEEEEEETTCCCEEEEEECTTTCCE----EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEET
T ss_pred EEEEecCCCCCcceEEEEecCCCce----EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEec
Confidence 434343322 399999987642 223333221110 11237899986444433 55678999999
Q ss_pred cCCCCCCCeeEeeccCC-----------CeeEEEeCCCCCc---cCCCCceEEeee
Q 020480 258 RTPSVSKPVQSVVAHQS-----------EVGVSILNASFRL---SHEDTCTCTHRH 299 (325)
Q Consensus 258 ~~~~~~~~~~~~~~h~~-----------~v~~i~~~p~~~~---~~~~d~~~~~~~ 299 (325)
.+++ +..+..+.. .+.+++|+|+|+. ....++...+|.
T Consensus 328 ~~~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~ 379 (388)
T 3pe7_A 328 KNGT----QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYL 379 (388)
T ss_dssp TTTE----EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred cCCc----eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEE
Confidence 8866 455555555 5788999999973 333445555543
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.90 E-value=2.3e-08 Score=87.86 Aligned_cols=133 Identities=12% Similarity=0.083 Sum_probs=92.1
Q ss_pred EEecCCCCcEEEEEec-CC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEe
Q 020480 131 ARYMPQNPFLIATKTV-SA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWD 207 (325)
Q Consensus 131 v~~~~~~~~~la~g~~-dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd 207 (325)
.+|+|+| +.|+.++. +| .|.+||+.. + .......++...+..+.|+|++. .|+.++.++.|++||
T Consensus 41 ~~~SpDg-~~l~~~~~~~g~~~l~~~d~~~--------g--~~~~lt~~~~~~~~~~~~spdg~-~l~~~~~~~~l~~~d 108 (388)
T 3pe7_A 41 KCFTRDG-SKLLFGGAFDGPWNYYLLDLNT--------Q--VATQLTEGRGDNTFGGFLSPDDD-ALFYVKDGRNLMRVD 108 (388)
T ss_dssp CCBCTTS-CEEEEEECTTSSCEEEEEETTT--------C--EEEECCCSSCBCSSSCEECTTSS-EEEEEETTTEEEEEE
T ss_pred ccCCCCC-CEEEEEEcCCCCceEEEEeCCC--------C--ceEEeeeCCCCCccceEEcCCCC-EEEEEeCCCeEEEEE
Confidence 7899999 56666665 67 488888876 2 22222334544555678999999 799999999999999
Q ss_pred CCCCCCCCcccceEeeecCCccEEEEE--eecCCCcEEEEE----------------------ecCCcEEEEEccCCCCC
Q 020480 208 INAAPKNKSLEAMQIFKVHEGVVEDVA--WHLRHEYLFGSV----------------------GDDQYLLIWDLRTPSVS 263 (325)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~v~--~~p~~~~~l~s~----------------------~~dg~i~iwd~~~~~~~ 263 (325)
+.++. ....+..+...+.... ++|++ .+++.. ..+..|.+||+.+++
T Consensus 109 ~~~g~------~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~-- 179 (388)
T 3pe7_A 109 LATLE------ENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE-- 179 (388)
T ss_dssp TTTCC------EEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--
T ss_pred CCCCc------ceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--
Confidence 99863 2333444444454444 47877 455432 234679999999876
Q ss_pred CCeeEeeccCCCeeEEEeCC-CCC
Q 020480 264 KPVQSVVAHQSEVGVSILNA-SFR 286 (325)
Q Consensus 264 ~~~~~~~~h~~~v~~i~~~p-~~~ 286 (325)
...+..+...+..++|+| +|+
T Consensus 180 --~~~l~~~~~~~~~~~~sp~dg~ 201 (388)
T 3pe7_A 180 --STVILQENQWLGHPIYRPYDDS 201 (388)
T ss_dssp --EEEEEEESSCEEEEEEETTEEE
T ss_pred --eEEeecCCccccccEECCCCCC
Confidence 455556777899999999 887
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.89 E-value=2.2e-07 Score=78.06 Aligned_cols=151 Identities=9% Similarity=0.055 Sum_probs=106.3
Q ss_pred CCCeeEEEec-CCCCcEEEEEec-CCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 125 DGEVNRARYM-PQNPFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 125 ~~~v~~v~~~-~~~~~~la~g~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
...+..+++. +++ +++++... ++.|.+|+... ..+..+. .+...+.+++++|++. ++++...++
T Consensus 76 ~~~p~~i~~~~~~g-~l~v~~~~~~~~i~~~d~~g-----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~ 142 (286)
T 1q7f_A 76 LLYPNRVAVVRNSG-DIIVTERSPTHQIQIYNQYG-----------QFVRKFGATILQHPRGVTVDNKGR-IIVVECKVM 142 (286)
T ss_dssp BSSEEEEEEETTTT-EEEEEECGGGCEEEEECTTS-----------CEEEEECTTTCSCEEEEEECTTSC-EEEEETTTT
T ss_pred ccCceEEEEEcCCC-eEEEEcCCCCCEEEEECCCC-----------cEEEEecCccCCCceEEEEeCCCC-EEEEECCCC
Confidence 3567889995 555 66666543 78999999543 2233343 3445789999999987 888888889
Q ss_pred cEEEEeCCCCCCCCcccceEeee--cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc--CCCee
Q 020480 202 QICLWDINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH--QSEVG 277 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h--~~~v~ 277 (325)
.|.+||.... .+..+. .+...+..++++|++ +++++...++.|++||... + .+..+..+ ...+.
T Consensus 143 ~i~~~~~~g~-------~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~---~~~~~~~~g~~~~p~ 210 (286)
T 1q7f_A 143 RVIIFDQNGN-------VLHKFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEG-Q---YLRQIGGEGITNYPI 210 (286)
T ss_dssp EEEEECTTSC-------EEEEEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTC-C---EEEEESCTTTSCSEE
T ss_pred EEEEEcCCCC-------EEEEeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCC-C---EEEEEccCCccCCCc
Confidence 9999996532 233332 344568999999987 6888888899999999743 3 24555333 35789
Q ss_pred EEEeCCCCCc--cCCCCc-eEEeeec
Q 020480 278 VSILNASFRL--SHEDTC-TCTHRHS 300 (325)
Q Consensus 278 ~i~~~p~~~~--~~~~d~-~~~~~~~ 300 (325)
.|+++++|.+ +...++ .+.+|+.
T Consensus 211 ~i~~d~~G~l~v~~~~~~~~i~~~~~ 236 (286)
T 1q7f_A 211 GVGINSNGEILIADNHNNFNLTIFTQ 236 (286)
T ss_dssp EEEECTTCCEEEEECSSSCEEEEECT
T ss_pred EEEECCCCCEEEEeCCCCEEEEEECC
Confidence 9999999986 334454 7888864
No 177
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.86 E-value=1.3e-07 Score=90.21 Aligned_cols=164 Identities=10% Similarity=-0.020 Sum_probs=102.1
Q ss_pred cCCCeeEEEecCCCCcEEEEEec-----CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 124 HDGEVNRARYMPQNPFLIATKTV-----SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~-----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
|...+..+.|+|+| +.|+.++. +..|++||+....... ........+..+...+.. .|+|++..+++.+.
T Consensus 231 ~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~---~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~ 305 (710)
T 2xdw_A 231 EPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGI---TGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTN 305 (710)
T ss_dssp CTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSS---CSSCCCEEEECSSSSCEE-EEEEETTEEEEEEC
T ss_pred CCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECccccccc---CCccceEEeeCCCCcEEE-EEeccCCEEEEEEC
Confidence 45667889999999 46665543 5689999986410000 001134556666666655 48888884444443
Q ss_pred CC---CcEEEEeCCCCCCCCcccceEeeecCCc--cEEEEEeecCCCcEEEEEecCCcE--EEEEccCCCCCCCeeEeec
Q 020480 199 DD---AQICLWDINAAPKNKSLEAMQIFKVHEG--VVEDVAWHLRHEYLFGSVGDDQYL--LIWDLRTPSVSKPVQSVVA 271 (325)
Q Consensus 199 ~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~--~v~~v~~~p~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~~~~~~ 271 (325)
.+ +.|.+||+..+.. .....+..|.. .+..++|++.+ .++++...++.. .+||+.+++ .+..+..
T Consensus 306 ~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~g~~~l~~~~~~~g~---~~~~l~~ 377 (710)
T 2xdw_A 306 RHSPNYRLINIDFTDPEE----SKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHDVKNTLQLHDLATGA---LLKIFPL 377 (710)
T ss_dssp TTCTTCEEEEEETTSCCG----GGCEEEECCCSSCEEEEEEEETTT-EEEEEEEETTEEEEEEEETTTCC---EEEEECC
T ss_pred CCCCCCEEEEEeCCCCCc----ccceeccCCCCCCeEEEEEEEcCC-EEEEEEEECCEEEEEEEECCCCC---EEEecCC
Confidence 33 3699999886531 11234444443 68889998654 688888889864 555665555 3566666
Q ss_pred cCCCeeEEEeCCCCC-c-----cCCCCceEEeeec
Q 020480 272 HQSEVGVSILNASFR-L-----SHEDTCTCTHRHS 300 (325)
Q Consensus 272 h~~~v~~i~~~p~~~-~-----~~~~d~~~~~~~~ 300 (325)
+...+..++++|++. + +....+++..+++
T Consensus 378 ~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 412 (710)
T 2xdw_A 378 EVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDL 412 (710)
T ss_dssp CSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEET
T ss_pred CCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 677888999999875 2 2223345666654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.85 E-value=2.5e-07 Score=78.25 Aligned_cols=156 Identities=10% Similarity=-0.012 Sum_probs=108.8
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
.+.....+++|+|++..+++++..++.|..|+... . ...+..+...+.+++++|++. ++++...++.
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~-----------~-~~~~~~~~~~~~~l~~~~dg~-l~v~~~~~~~ 91 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG-----------Q-LSPEMHPSHHQNGHCLNKQGH-LIACSHGLRR 91 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS-----------C-EEEEESSCSSEEEEEECTTCC-EEEEETTTTE
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC-----------C-eEEEECCCCCcceeeECCCCc-EEEEecCCCe
Confidence 45667889999999844888989999999999876 2 455666777899999999998 7777777799
Q ss_pred EEEEeCCCCCCCCcccceEe-eec-CCccEEEEEeecCCCcEEEEEec-----------------CCcEEEEEccCCCCC
Q 020480 203 ICLWDINAAPKNKSLEAMQI-FKV-HEGVVEDVAWHLRHEYLFGSVGD-----------------DQYLLIWDLRTPSVS 263 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~-~~~-~~~~v~~v~~~p~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~ 263 (325)
|.+||..++.. ..+.. ... ....++.++++|+| +++++.+. .+.|..++.. ++
T Consensus 92 i~~~d~~~g~~----~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-- 163 (296)
T 3e5z_A 92 LERQREPGGEW----ESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-- 163 (296)
T ss_dssp EEEECSTTCCE----EEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--
T ss_pred EEEEcCCCCcE----EEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CC--
Confidence 99999876532 11111 111 12346789999987 57776321 2345445443 22
Q ss_pred CCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 264 KPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 264 ~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
+..+..+....+.++|+|+|++ +.+.++.+..|+..
T Consensus 164 --~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 164 --LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp --EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred --EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 4555556677899999999984 44556677777653
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.83 E-value=1.9e-07 Score=80.72 Aligned_cols=141 Identities=9% Similarity=0.006 Sum_probs=87.0
Q ss_pred eeEEEecCCCCcEEEEEec---------------------------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc
Q 020480 128 VNRARYMPQNPFLIATKTV---------------------------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~---------------------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~ 180 (325)
+..+.|+|++ +.|+.++. ...|++|++.. +. .+..+.. . .
T Consensus 106 ~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~--------~~--~~~~l~~-~-~ 172 (347)
T 2gop_A 106 IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES--------EE--VIEEFEK-P-R 172 (347)
T ss_dssp EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEEEEEEEETTT--------TE--EEEEEEE-E-T
T ss_pred ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC--------Ce--EEeeecC-C-C
Confidence 8999999999 56665543 25788899876 22 1133333 3 7
Q ss_pred eEEEEecCCCCCeEEEEeCCC-------cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC----
Q 020480 181 GYGLSWSKFKEGHLLSGSDDA-------QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---- 249 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d---- 249 (325)
+..+.|+|++ +++++..++ ...||.+..+ ....+..+ ..+..+ +|+|. .|+.++.+
T Consensus 173 ~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~-------~~~~l~~~-~~~~~~--spdg~-~l~~~~~~~~~~ 239 (347)
T 2gop_A 173 FSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG-------KEEKMFEK-VSFYAV--DSDGE-RILLYGKPEKKY 239 (347)
T ss_dssp TCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT-------EEEEEEEE-ESEEEE--EECSS-CEEEEECCSSSC
T ss_pred cccccCCCCe--EEEEEecccccccccccccEEEeCCC-------ceEEeccC-cceeeE--CCCCC-EEEEEEccccCC
Confidence 7899999998 677776542 4455554422 12233333 445444 99985 45555533
Q ss_pred ----CcEEEEEccCCCCCCCeeEeeccCCCeeE-EEeCCCCCc-cCCCCceEEeeecc
Q 020480 250 ----QYLLIWDLRTPSVSKPVQSVVAHQSEVGV-SILNASFRL-SHEDTCTCTHRHSR 301 (325)
Q Consensus 250 ----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-i~~~p~~~~-~~~~d~~~~~~~~~ 301 (325)
..|.+|| +++ .......+...+.. +.|+ ++.+ +++.++..++| +.
T Consensus 240 ~~~~~~l~~~d--~~~---~~~l~~~~~~~~~~~~~~s-dg~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 240 MSEHNKLYIYD--GKE---VMGILDEVDRGVGQAKIKD-GKVYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp CCSSCEEEEEC--SSC---EEESSTTCCSEEEEEEEET-TEEEEEEEETTEEEEE-EE
T ss_pred ccccceEEEEC--CCc---eEeccccCCcccCCccEEc-CcEEEEEecCCcEEEE-Ec
Confidence 3677777 333 12333455677886 9999 8833 66677888888 64
No 180
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.80 E-value=1.6e-07 Score=89.50 Aligned_cols=152 Identities=9% Similarity=0.039 Sum_probs=95.4
Q ss_pred eEEEecCCCCcEEEEEecCCe-------------EEEEeCCCCCCCCCCCCCCCCcEEE--ecCCCceEEEEecCCCCCe
Q 020480 129 NRARYMPQNPFLIATKTVSAE-------------VYVFDYSKHPSKPPLDGACSPDLRL--RGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 129 ~~v~~~~~~~~~la~g~~dg~-------------v~vwd~~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~~p~~~~~ 193 (325)
..++|+|+| +.|+.++.+.. |++|++.+ +.......+ ..|...+.++.|+|++. +
T Consensus 171 ~~~~wspDg-~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t--------~~~~~~lv~~~~~~~~~~~~~~~SpDG~-~ 240 (695)
T 2bkl_A 171 ATPKWTPDS-KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGT--------EPSKDTVVHERTGDPTTFLQSDLSRDGK-Y 240 (695)
T ss_dssp CCCEECTTS-SEEEEEECCCCTTSCGGGGGGGCEEEEEETTS--------CGGGCEEEECCCCCTTCEEEEEECTTSC-C
T ss_pred cceEEecCC-CEEEEEEecCCCCCccccCCCCCEEEEEECCC--------CchhceEEEecCCCCEEEEEEEECCCCC-E
Confidence 578999999 57777777665 99999976 222122223 34556789999999998 5
Q ss_pred EEEEeCCC----cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe---cCCcEEEEEccCCCCCCCe
Q 020480 194 LLSGSDDA----QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG---DDQYLLIWDLRTPSVSKPV 266 (325)
Q Consensus 194 l~s~s~dg----~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~ 266 (325)
|+.++.++ .|++|+...+ ....+..+...+....| +++. +++++. .++.|.+||+.++... ..
T Consensus 241 l~~~~~~~~~~~~l~~~~~~~~-------~~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~-~~ 310 (695)
T 2bkl_A 241 LFVYILRGWSENDVYWKRPGEK-------DFRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARA-SW 310 (695)
T ss_dssp EEEEEEETTTEEEEEEECTTCS-------SCEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGG-GC
T ss_pred EEEEEeCCCCceEEEEEcCCCC-------ceEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCcc-CC
Confidence 66555554 5666655433 13334445555566666 5665 555554 3588999998776410 12
Q ss_pred eEeecc--CCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 267 QSVVAH--QSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 267 ~~~~~h--~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
..+..+ ...+..++|+ ++.+ +...++..++|.+.
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 333333 4467888888 4443 55667777777543
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.79 E-value=2.7e-07 Score=76.70 Aligned_cols=153 Identities=4% Similarity=-0.062 Sum_probs=105.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..+..+++.+++ +++++...++.|.+|+... .............+.++++++++. ++++...++.|.+
T Consensus 108 ~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~----------~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~ 175 (270)
T 1rwi_B 108 NYPEGLAVDTQG-AVYVADRGNNRVVKLAAGS----------KTQTVLPFTGLNDPDGVAVDNSGN-VYVTDTDNNRVVK 175 (270)
T ss_dssp SSEEEEEECTTC-CEEEEEGGGTEEEEECTTC----------CSCEECCCCSCCSCCCEEECTTCC-EEEEEGGGTEEEE
T ss_pred CCCcceEECCCC-CEEEEECCCCEEEEEECCC----------ceeEeeccccCCCceeEEEeCCCC-EEEEECCCCEEEE
Confidence 567899999988 6777777788999997543 111111112234578899999887 7888777899999
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASF 285 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~ 285 (325)
||...... ......+...+..+++++++ +++++...++.|.+||...... ......+...+.+++++++|
T Consensus 176 ~~~~~~~~------~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~---~~~~~~~~~~p~~i~~~~~g 245 (270)
T 1rwi_B 176 LEAESNNQ------VVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS---TVLPFTGLNTPLAVAVDSDR 245 (270)
T ss_dssp ECTTTCCE------EECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC---EECCCCSCSCEEEEEECTTC
T ss_pred EecCCCce------EeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc---eeeccCCCCCceeEEECCCC
Confidence 99876421 11112233568899999987 7888888889999999876542 22222233568999999999
Q ss_pred Cc--cCCCCceEEeeec
Q 020480 286 RL--SHEDTCTCTHRHS 300 (325)
Q Consensus 286 ~~--~~~~d~~~~~~~~ 300 (325)
.+ +...++.+++++.
T Consensus 246 ~l~v~~~~~~~v~~~~~ 262 (270)
T 1rwi_B 246 TVYVADRGNDRVVKLTS 262 (270)
T ss_dssp CEEEEEGGGTEEEEECC
T ss_pred CEEEEECCCCEEEEEcC
Confidence 86 4445666666543
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.71 E-value=1.8e-07 Score=89.12 Aligned_cols=158 Identities=9% Similarity=-0.040 Sum_probs=95.4
Q ss_pred cCCCeeEEEecCCCCcEEE-----EEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 124 HDGEVNRARYMPQNPFLIA-----TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la-----~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
|...+..++|+|+| ++|| .|+.+..|++||+.+ +.......+... ....++|+|++. .|+.++
T Consensus 119 ~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~t--------g~~~~~~~~~~~--~~~~~~wspDg~-~l~~~~ 186 (695)
T 2bkl_A 119 GTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDS--------GEWSKVDVIEGG--KYATPKWTPDSK-GFYYEW 186 (695)
T ss_dssp SCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTT--------CCBCSSCCBSCC--TTCCCEECTTSS-EEEEEE
T ss_pred CCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCC--------CCCcCCcccCcc--cccceEEecCCC-EEEEEE
Confidence 44568899999999 5666 334456899999987 222101011111 126899999999 788888
Q ss_pred CCCc-------------EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-C--cEEEEEccCCCC
Q 020480 199 DDAQ-------------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-Q--YLLIWDLRTPSV 262 (325)
Q Consensus 199 ~dg~-------------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g--~i~iwd~~~~~~ 262 (325)
.|.. |++|++.++.... ..+.....+...+..+.|+|+|..++++...+ + .|+++|..++.
T Consensus 187 ~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~--~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~- 263 (695)
T 2bkl_A 187 LPTDPSIKVDERPGYTTIRYHTLGTEPSKD--TVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD- 263 (695)
T ss_dssp CCCCTTSCGGGGGGGCEEEEEETTSCGGGC--EEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-
T ss_pred ecCCCCCccccCCCCCEEEEEECCCCchhc--eEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-
Confidence 7766 9999998764210 12333334556788999999986444444333 3 45555544333
Q ss_pred CCCeeEeeccCCCeeEEEeCCCCCc--cCC---CCceEEeeec
Q 020480 263 SKPVQSVVAHQSEVGVSILNASFRL--SHE---DTCTCTHRHS 300 (325)
Q Consensus 263 ~~~~~~~~~h~~~v~~i~~~p~~~~--~~~---~d~~~~~~~~ 300 (325)
...+..+...+....|+ +|.+ ... .++.+..|++
T Consensus 264 ---~~~l~~~~~~~~~~~~~-~g~l~~~s~~~~~~~~l~~~d~ 302 (695)
T 2bkl_A 264 ---FRLLVKGVGAKYEVHAW-KDRFYVLTDEGAPRQRVFEVDP 302 (695)
T ss_dssp ---CEEEEECSSCCEEEEEE-TTEEEEEECTTCTTCEEEEEBT
T ss_pred ---eEEeecCCCceEEEEec-CCcEEEEECCCCCCCEEEEEeC
Confidence 45555555556666664 3334 111 2456666654
No 183
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.68 E-value=3.6e-07 Score=80.25 Aligned_cols=150 Identities=11% Similarity=0.123 Sum_probs=92.4
Q ss_pred CCCCCCCceEEEEEeccCCCeeEEEecC-CCCcEEEEEecC------CeEEEEeCCCCCCCCCCCCCCCCcEEEecC--C
Q 020480 108 GFGCANGKVQIIQQINHDGEVNRARYMP-QNPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRGH--S 178 (325)
Q Consensus 108 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~-~~~~~la~g~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h--~ 178 (325)
.++...++...+ ..+...+..+.|+| ++ ..|+..+.+ ..|.+|++.. +. ...+..+ .
T Consensus 172 ~~d~~~g~~~~~--~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~--------~~---~~~l~~~~~~ 237 (396)
T 3c5m_A 172 KVDIETGELEVI--HQDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDG--------SN---VRKIKEHAEG 237 (396)
T ss_dssp EEETTTCCEEEE--EEESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTS--------CC---CEESSCCCTT
T ss_pred EEECCCCcEEee--ccCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCC--------Cc---eeEeeccCCC
Confidence 344344444332 35677889999999 66 555554443 3688888765 11 2223223 2
Q ss_pred CceEEEEecCCCCCeEEEEeCC-----CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeec-CCCcEEEEEe-----
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVG----- 247 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~l~s~~----- 247 (325)
..+..+.|+|++. .|+.++.+ +.|++||+.++.. ..+..+. . .. +.|+| ++. ++++++
T Consensus 238 ~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~d~~~g~~----~~l~~~~---~-~~-~~~s~~dg~-~l~~~~~~~p~ 306 (396)
T 3c5m_A 238 ESCTHEFWIPDGS-AMAYVSYFKGQTDRVIYKANPETLEN----EEVMVMP---P-CS-HLMSNFDGS-LMVGDGCDAPV 306 (396)
T ss_dssp EEEEEEEECTTSS-CEEEEEEETTTCCEEEEEECTTTCCE----EEEEECC---S-EE-EEEECSSSS-EEEEEECCC--
T ss_pred ccccceEECCCCC-EEEEEecCCCCccceEEEEECCCCCe----EEeeeCC---C-CC-CCccCCCCc-eEEEecCCcce
Confidence 3578899999998 55555433 4499999987532 1122121 1 23 88999 885 666544
Q ss_pred -----------cCCcEEEEEccCCCCCCCeeEeeccCC-----------CeeEEEeCCCCC
Q 020480 248 -----------DDQYLLIWDLRTPSVSKPVQSVVAHQS-----------EVGVSILNASFR 286 (325)
Q Consensus 248 -----------~dg~i~iwd~~~~~~~~~~~~~~~h~~-----------~v~~i~~~p~~~ 286 (325)
.++.|++||+.++.. ..+..+.. .+..++|+|+|+
T Consensus 307 ~~~~~~~~~~~~~~~i~~~d~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 307 DVADADSYNIENDPFLYVLNTKAKSA----QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp --------CCCCCCEEEEEETTTTBC----CEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred eeccccccccCCCCcEEEEecccCce----EEccCCCCccccccccccCCCCCceEccCCC
Confidence 347899999987762 33444443 256789999997
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.67 E-value=2.7e-06 Score=78.70 Aligned_cols=165 Identities=11% Similarity=0.017 Sum_probs=113.4
Q ss_pred EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEec----CCCCCeE
Q 020480 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS----KFKEGHL 194 (325)
Q Consensus 119 ~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~----p~~~~~l 194 (325)
+..+.....+..+.|+|++ +++++++.++.|.+||+.. ...+.+..+... .....++|+ |++..++
T Consensus 190 ~~~i~~g~~p~~v~~SpDG-r~lyv~~~dg~V~viD~~~--------~t~~~v~~i~~G-~~P~~ia~s~~~~pDGk~l~ 259 (567)
T 1qks_A 190 KTVLDTGYAVHISRLSASG-RYLFVIGRDGKVNMIDLWM--------KEPTTVAEIKIG-SEARSIETSKMEGWEDKYAI 259 (567)
T ss_dssp EEEEECSSCEEEEEECTTS-CEEEEEETTSEEEEEETTS--------SSCCEEEEEECC-SEEEEEEECCSTTCTTTEEE
T ss_pred EEEEeCCCCccceEECCCC-CEEEEEcCCCeEEEEECCC--------CCCcEeEEEecC-CCCceeEEccccCCCCCEEE
Confidence 3445555567799999999 6777788999999999951 113445555543 346799999 6998555
Q ss_pred EEEeCCCcEEEEeCCCCCCCCcccceEeeec----------C-CccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC
Q 020480 195 LSGSDDAQICLWDINAAPKNKSLEAMQIFKV----------H-EGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS 263 (325)
Q Consensus 195 ~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~----------~-~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 263 (325)
++...++++.++|..+.+ ++..+.. | ...+..+..+++++.++++...+|.|.++|.......
T Consensus 260 v~n~~~~~v~ViD~~t~~------~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~ 333 (567)
T 1qks_A 260 AGAYWPPQYVIMDGETLE------PKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNL 333 (567)
T ss_dssp EEEEETTEEEEEETTTCC------EEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEE
T ss_pred EEEccCCeEEEEECCCCc------EEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccc
Confidence 566677999999987753 3333221 1 2267788889887777778888899999999875421
Q ss_pred CCeeEeeccCCCeeEEEeCCCCCc---cCCCCceEEeeecc
Q 020480 264 KPVQSVVAHQSEVGVSILNASFRL---SHEDTCTCTHRHSR 301 (325)
Q Consensus 264 ~~~~~~~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~~ 301 (325)
.+..+ .......++.|+|+|++ ....+..+.++|..
T Consensus 334 -~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~ 372 (567)
T 1qks_A 334 -KTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTK 372 (567)
T ss_dssp -EEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred -eeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECC
Confidence 12222 23456778999999994 33456677777664
No 185
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.66 E-value=1.7e-07 Score=80.60 Aligned_cols=137 Identities=10% Similarity=0.058 Sum_probs=100.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..|.++.|++.+ ..++..+.++.++.|.- .....+..+...+.+++|+|++. +++++..++.|.+
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~~~~~i~~ 70 (333)
T 2dg1_A 6 QDLPTLFYSGKS-NSAVPIISESELQTITA-------------EPWLEISKKGLQLEGLNFDRQGQ-LFLLDVFEGNIFK 70 (333)
T ss_dssp CCCCBCCSCGGG-GCSSCCCCGGGSCEEEC-------------EEEEEEESSCCCEEEEEECTTSC-EEEEETTTCEEEE
T ss_pred cccceeeecCCc-cceeEEeecccCccccc-------------ceeEEEeccCccccCcEECCCCC-EEEEECCCCEEEE
Confidence 457788899876 45666577788888832 22455667777889999999988 7888888999999
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC----CcEEEEEccCCCCCCCeeEee--ccCCCeeEE
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVV--AHQSEVGVS 279 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~--~h~~~v~~i 279 (325)
||...+. .......+...+.+++++|++ .++++...+ +.|.+||..+... ...+. .+...++++
T Consensus 71 ~d~~~~~------~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~---~~~~~~~~~~~~~~~i 140 (333)
T 2dg1_A 71 INPETKE------IKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNL---QDIIEDLSTAYCIDDM 140 (333)
T ss_dssp ECTTTCC------EEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSC---EEEECSSSSCCCEEEE
T ss_pred EeCCCCc------EEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEE---EEEEccCccCCcccce
Confidence 9988652 222222456779999999987 577776666 6899999887663 21221 234578999
Q ss_pred EeCCCCCc
Q 020480 280 ILNASFRL 287 (325)
Q Consensus 280 ~~~p~~~~ 287 (325)
+++|+|.+
T Consensus 141 ~~d~~g~l 148 (333)
T 2dg1_A 141 VFDSKGGF 148 (333)
T ss_dssp EECTTSCE
T ss_pred EECCCCCE
Confidence 99999986
No 186
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.65 E-value=1.4e-06 Score=72.33 Aligned_cols=152 Identities=7% Similarity=-0.048 Sum_probs=103.3
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
...+.++++.+++ +++++.. ++.|.+|+... .....+. .....+.++++++++. ++++...++.|
T Consensus 66 ~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~~-----------~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i 131 (270)
T 1rwi_B 66 LYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAGS-----------NNQTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRV 131 (270)
T ss_dssp CCSCCCEEECTTC-CEEEEET-TTEEEEECTTC-----------SCCEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEE
T ss_pred cCCcceeEECCCC-CEEEEcC-CCEEEEEeCCC-----------ceEeeeecCCcCCCcceEECCCCC-EEEEECCCCEE
Confidence 3567889999988 5666655 88999999765 1122222 2235689999999887 78877788999
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
.+|+...... ..........+..++++|++ +++++...++.|.+||...... ......+...+.+|++++
T Consensus 132 ~~~~~~~~~~------~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~---~~~~~~~~~~p~~i~~d~ 201 (270)
T 1rwi_B 132 VKLAAGSKTQ------TVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQ---VVLPFTDITAPWGIAVDE 201 (270)
T ss_dssp EEECTTCCSC------EECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCE---EECCCSSCCSEEEEEECT
T ss_pred EEEECCCcee------EeeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCce---EeecccCCCCceEEEECC
Confidence 9997654321 11112223457889999987 5777777889999999876552 222222336688999999
Q ss_pred CCCc--cCCCCceEEeeec
Q 020480 284 SFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 284 ~~~~--~~~~d~~~~~~~~ 300 (325)
+|.+ +...++.+..++.
T Consensus 202 ~g~l~v~~~~~~~v~~~~~ 220 (270)
T 1rwi_B 202 AGTVYVTEHNTNQVVKLLA 220 (270)
T ss_dssp TCCEEEEETTTSCEEEECT
T ss_pred CCCEEEEECCCCcEEEEcC
Confidence 9886 3334566777654
No 187
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.65 E-value=5.6e-07 Score=76.47 Aligned_cols=157 Identities=7% Similarity=0.040 Sum_probs=102.0
Q ss_pred CCeeEEEecCCCCcEEEEEecC---------------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEec---
Q 020480 126 GEVNRARYMPQNPFLIATKTVS---------------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS--- 187 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~d---------------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--- 187 (325)
..+.++++.+++ +++++...+ +.|..++... . ...+..+......++|+
T Consensus 117 ~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g-----------~-~~~~~~~~~~~~~i~~~~~~ 183 (314)
T 1pjx_A 117 QGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTDG-----------Q-MIQVDTAFQFPNGIAVRHMN 183 (314)
T ss_dssp BCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTTS-----------C-EEEEEEEESSEEEEEEEECT
T ss_pred cCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCCC-----------C-EEEeccCCCCcceEEEeccc
Confidence 357899999988 566665544 4566666432 1 22222333456889999
Q ss_pred -CCCCCeEEEEeCCCcEEEEeCC-CCCCCCcccceEeeecCC-ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCC
Q 020480 188 -KFKEGHLLSGSDDAQICLWDIN-AAPKNKSLEAMQIFKVHE-GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK 264 (325)
Q Consensus 188 -p~~~~~l~s~s~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~-~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 264 (325)
|++..++++...++.|.+||+. .+.. ........+..+. ..+..+++++++ +++++...++.|.+||..+++.
T Consensus 184 d~dg~~l~v~~~~~~~i~~~~~~~~g~~-~~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~-- 259 (314)
T 1pjx_A 184 DGRPYQLIVAETPTKKLWSYDIKGPAKI-ENKKVWGHIPGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQP-- 259 (314)
T ss_dssp TSCEEEEEEEETTTTEEEEEEEEETTEE-EEEEEEEECCCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSC--
T ss_pred CCCCCEEEEEECCCCeEEEEECCCCCcc-ccceEEEECCCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcE--
Confidence 9886355666678999999986 2210 0001122233333 567889999987 6887777889999999886653
Q ss_pred CeeEeeccCCCeeEEEeCCCCC-c--cCCCCceEEeeec
Q 020480 265 PVQSVVAHQSEVGVSILNASFR-L--SHEDTCTCTHRHS 300 (325)
Q Consensus 265 ~~~~~~~h~~~v~~i~~~p~~~-~--~~~~d~~~~~~~~ 300 (325)
+..+..+...+.+++|+|+|. + +...++.+..++.
T Consensus 260 -~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 260 -KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp -SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred -eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 555555667899999999998 4 3334445555554
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.61 E-value=6.4e-07 Score=78.29 Aligned_cols=90 Identities=7% Similarity=0.075 Sum_probs=69.5
Q ss_pred EEecCCCCCeEEEEe----------CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEE
Q 020480 184 LSWSKFKEGHLLSGS----------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253 (325)
Q Consensus 184 l~~~p~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~ 253 (325)
++++|++..++++.. ..+.|.+||+.+. +.+..+..+. +.+++|+|++. ++++++. +.|.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~------~~v~~i~~~~--p~~ia~spdg~-~l~v~n~-~~v~ 328 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK------QRVARIPGRD--ALSMTIDQQRN-LMLTLDG-GNVN 328 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT------EEEEEEECTT--CCEEEEETTTT-EEEEECS-SCEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC------cEEEEEecCC--eeEEEECCCCC-EEEEeCC-CeEE
Confidence 788999874444433 1358999999887 4566676666 99999999985 6667666 9999
Q ss_pred EEEccCC--CCCCCeeEeeccCCCeeEEEeCCCCC
Q 020480 254 IWDLRTP--SVSKPVQSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 254 iwd~~~~--~~~~~~~~~~~h~~~v~~i~~~p~~~ 286 (325)
+||..++ + .+..+..+......++++|+|.
T Consensus 329 v~D~~t~~l~---~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 329 VYDISQPEPK---LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEECSSSSCE---EEEEETTSCSSEEEEEECCCSC
T ss_pred EEECCCCcce---eeEEeccCCCCcEEEEecCCCC
Confidence 9999998 6 3666666777889999999985
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.60 E-value=1.3e-05 Score=69.86 Aligned_cols=64 Identities=9% Similarity=0.062 Sum_probs=48.2
Q ss_pred EEeecCCCcEEEEEe----------cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCCCCceEEeeec
Q 020480 233 VAWHLRHEYLFGSVG----------DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 233 v~~~p~~~~~l~s~~----------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
++++|++..++++.. ..+.|.+||+.+.+. +.++..+. +.+|+|+|+|++ +++. +++.+||.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~---v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~ 332 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQR---VARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDI 332 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEE---EEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEEC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcE---EEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEEC
Confidence 678898765555544 134799999999874 77777666 999999999984 4444 89999986
Q ss_pred ce
Q 020480 301 RY 302 (325)
Q Consensus 301 ~~ 302 (325)
..
T Consensus 333 ~t 334 (361)
T 2oiz_A 333 SQ 334 (361)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.59 E-value=2.4e-06 Score=72.17 Aligned_cols=159 Identities=9% Similarity=-0.085 Sum_probs=101.9
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ec-CCCceEEEEecCCCCCeEEEE---
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RG-HSTEGYGLSWSKFKEGHLLSG--- 197 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~-h~~~v~~l~~~p~~~~~l~s~--- 197 (325)
.+...+.++++++++ +++++...++.|.+|+..+ +....+... .+ ....+.+++++|++. ++++.
T Consensus 66 ~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~--------g~~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~ 135 (296)
T 3e5z_A 66 HPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPG--------GEWESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTY 135 (296)
T ss_dssp SSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTT--------CCEEEEECEETTEECCCCCCEEECTTSC-EEEEECSH
T ss_pred CCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCC--------CcEEEEeeccCCCCCCCCCCEEECCCCC-EEEECCcc
Confidence 466778999999988 5777766678999999865 222111100 01 123456899999998 77773
Q ss_pred -e-------------CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCC
Q 020480 198 -S-------------DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVS 263 (325)
Q Consensus 198 -s-------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 263 (325)
+ ..+.|..++.. + .+..+..+......++|+|++. .+++.+.++.|.+||+......
T Consensus 136 g~~~~~~~~~~~~~~~~~~l~~~~~~-g-------~~~~~~~~~~~~~gi~~s~dg~-~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 136 GIDKPEEGYGGEMELPGRWVFRLAPD-G-------TLSAPIRDRVKPNGLAFLPSGN-LLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp HHHCGGGSSCCCCCSSSCEEEEECTT-S-------CEEEEECCCSSEEEEEECTTSC-EEEEETTTTEEEEEEECSSSCE
T ss_pred ccccccccccccccCCCcEEEEECCC-C-------CEEEeecCCCCCccEEECCCCC-EEEEeCCCCeEEEEEECCCCcC
Confidence 2 13456666554 2 1233445556788999999985 5588888899999999732210
Q ss_pred -CCeeEeeccCCCeeEEEeCCCCCccCCCCceEEeeec
Q 020480 264 -KPVQSVVAHQSEVGVSILNASFRLSHEDTCTCTHRHS 300 (325)
Q Consensus 264 -~~~~~~~~h~~~v~~i~~~p~~~~~~~~d~~~~~~~~ 300 (325)
.....+..+...+.+++++++|.+..+.++.+..|+.
T Consensus 207 ~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~v~~~~~ 244 (296)
T 3e5z_A 207 EYQGVHFTVEPGKTDGLRVDAGGLIWASAGDGVHVLTP 244 (296)
T ss_dssp EEEEEEECCSSSCCCSEEEBTTSCEEEEETTEEEEECT
T ss_pred cCCCeEeeCCCCCCCeEEECCCCCEEEEcCCeEEEECC
Confidence 0012223345567789999999973222677777764
No 191
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.59 E-value=6.3e-06 Score=69.17 Aligned_cols=154 Identities=7% Similarity=-0.063 Sum_probs=103.5
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
.+...+.++++.++| +++++...++.|.+|+... ......+..+...+.++++.+++. ++++...++.
T Consensus 12 ~~~~~~~~i~~d~~g-~l~v~~~~~~~v~~~d~~~----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 79 (299)
T 2z2n_A 12 NQDTGPYGITVSDKG-KVWITQHKANMISCINLDG----------KITEYPLPTPDAKVMCLTISSDGE-VWFTENAANK 79 (299)
T ss_dssp SSSCCEEEEEECTTS-CEEEEETTTTEEEEECTTC----------CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CcCCCccceEECCCC-CEEEEecCCCcEEEEcCCC----------CeEEecCCcccCceeeEEECCCCC-EEEeCCCCCe
Confidence 345678999999988 5666655578999998763 110111223456789999999987 7777777889
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEE
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSI 280 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~ 280 (325)
|..||.... ............+..+++.+++ .++++...++.|..||. ++. +..+ ......+.+++
T Consensus 80 i~~~~~~g~------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~----~~~~~~~~~~~~~~~i~ 147 (299)
T 2z2n_A 80 IGRITKKGI------IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGK----IREYELPNKGSYPSFIT 147 (299)
T ss_dssp EEEECTTSC------EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCC----EEEEECSSTTCCEEEEE
T ss_pred EEEECCCCc------EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCC----EEEecCCCCCCCCceEE
Confidence 999997621 1111112244578899999987 67777777889999998 444 2222 23445789999
Q ss_pred eCCCCCc--cCCCCceEEeeec
Q 020480 281 LNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 281 ~~p~~~~--~~~~d~~~~~~~~ 300 (325)
++++|.+ +....+.+..++.
T Consensus 148 ~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 148 LGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECT
T ss_pred EcCCCCEEEEeCCCCEEEEEcC
Confidence 9999886 2333455555543
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.57 E-value=4.1e-06 Score=70.25 Aligned_cols=154 Identities=6% Similarity=-0.075 Sum_probs=105.8
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceEEEEecCCCCCeEEEEeC-CCcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWSKFKEGHLLSGSD-DAQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~~~~~l~s~s~-dg~i 203 (325)
..+.++.+.|+| +++++ .++.|..||... +.+..+..+ ...+.++.+.+++. .+++.+. ++.|
T Consensus 37 ~~~~~~~~~pdG-~ilvs--~~~~V~~~d~~G-----------~~~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v 101 (276)
T 3no2_A 37 WECNSVAATKAG-EILFS--YSKGAKMITRDG-----------RELWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTI 101 (276)
T ss_dssp CCCCEEEECTTS-CEEEE--CBSEEEEECTTS-----------CEEEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEE
T ss_pred CCCcCeEECCCC-CEEEe--CCCCEEEECCCC-----------CEEEEEcCCCCccccccEECCCCC-EEEEecCCCCEE
Confidence 478999999998 67773 477899999832 446666654 35788999999998 7888776 7778
Q ss_pred EEEeCCCCCCCCcccceEeee------cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCee
Q 020480 204 CLWDINAAPKNKSLEAMQIFK------VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVG 277 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 277 (325)
..+|.. ++ .+..+. .+......++..+++ +++++...++.|..||.. ++. +..+... ..+.
T Consensus 102 ~~vd~~-Gk------~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v~~~d~~-G~~---~w~~~~~-~~~~ 168 (276)
T 3no2_A 102 LEVNMK-GE------VLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEVREIAPN-GQL---LNSVKLS-GTPF 168 (276)
T ss_dssp EEECTT-SC------EEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEEEEECTT-SCE---EEEEECS-SCCC
T ss_pred EEEeCC-CC------EEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEEEEECCC-CCE---EEEEECC-CCcc
Confidence 777763 32 233322 111234456778887 688899999999999987 663 6776543 4566
Q ss_pred EEEeCCCCCc--cCCCCceEEeeecc--eeeecc
Q 020480 278 VSILNASFRL--SHEDTCTCTHRHSR--YLLYKF 307 (325)
Q Consensus 278 ~i~~~p~~~~--~~~~d~~~~~~~~~--~~~~~~ 307 (325)
++.+.++|.+ .+...+.+..++.. ...|.+
T Consensus 169 ~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~ 202 (276)
T 3no2_A 169 SSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRV 202 (276)
T ss_dssp EEEECTTSCEEEECBTTSEEEEECTTTCCEEEEE
T ss_pred ceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEe
Confidence 7888888874 34445556665543 345555
No 193
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.54 E-value=8.5e-08 Score=84.28 Aligned_cols=137 Identities=10% Similarity=0.096 Sum_probs=87.2
Q ss_pred CCeeEEEecCCCCcEEEEEe-cC--CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceE-EEEecCCCCCeEEEEeCCC
Q 020480 126 GEVNRARYMPQNPFLIATKT-VS--AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGY-GLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~-~d--g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~~p~~~~~l~s~s~dg 201 (325)
..+..++|+|+|. .|+... .+ ..|.+|++.. +. ...+..+..... .+.|+|++. .|+.++.++
T Consensus 36 ~~~~~~~~SpdG~-~l~~~~~~~g~~~l~~~d~~~--------~~---~~~l~~~~~~~~~~~~~spdg~-~l~~~~~~~ 102 (396)
T 3c5m_A 36 NYFYQKCFTQDGK-KLLFAGDFDGNRNYYLLNLET--------QQ---AVQLTEGKGDNTFGGFISTDER-AFFYVKNEL 102 (396)
T ss_dssp CCTTSCCBCTTSC-EEEEEECTTSSCEEEEEETTT--------TE---EEECCCSSCBCTTTCEECTTSS-EEEEEETTT
T ss_pred eeeecCcCCCCCC-EEEEEEecCCCceEEEEECCC--------Cc---EEEeecCCCCccccceECCCCC-EEEEEEcCC
Confidence 3477889999994 555543 33 3788888876 21 223333333333 378999998 788888899
Q ss_pred cEEEEeCCCCCCCCcccceEeeecCCccEEE-------------------EEeecCCCcEEEEE-----ecCCcEEEEEc
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVED-------------------VAWHLRHEYLFGSV-----GDDQYLLIWDL 257 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~-------------------v~~~p~~~~~l~s~-----~~dg~i~iwd~ 257 (325)
.|++||+..+.. ......+...... +.|+|++. .++.+ ..+..|++||+
T Consensus 103 ~l~~~d~~~~~~------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~l~~~d~ 175 (396)
T 3c5m_A 103 NLMKVDLETLEE------QVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCRLIKVDI 175 (396)
T ss_dssp EEEEEETTTCCE------EEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEEEEEEET
T ss_pred cEEEEECCCCCc------EEEEecccccCCCCCEEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcceEEEEEC
Confidence 999999987632 2222222222222 34567653 33322 45678999999
Q ss_pred cCCCCCCCeeEeeccCCCeeEEEeCC-CCC
Q 020480 258 RTPSVSKPVQSVVAHQSEVGVSILNA-SFR 286 (325)
Q Consensus 258 ~~~~~~~~~~~~~~h~~~v~~i~~~p-~~~ 286 (325)
.+++ ...+..+...+..+.|+| ++.
T Consensus 176 ~~g~----~~~~~~~~~~~~~~~~sp~dg~ 201 (396)
T 3c5m_A 176 ETGE----LEVIHQDTAWLGHPIYRPFDDS 201 (396)
T ss_dssp TTCC----EEEEEEESSCEEEEEEETTEEE
T ss_pred CCCc----EEeeccCCcccccceECCCCCC
Confidence 8876 344445677899999999 676
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.54 E-value=1.5e-06 Score=74.90 Aligned_cols=131 Identities=14% Similarity=0.175 Sum_probs=82.4
Q ss_pred CCeeEEEecCCCCcEEEEEecC---C--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC-
Q 020480 126 GEVNRARYMPQNPFLIATKTVS---A--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD- 199 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~d---g--~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~- 199 (325)
..+..++|+|+| +.||.++.+ + .|.+|++.. + . ...+..+.. +..+.|+|++. .|+.++.
T Consensus 59 ~~~~~~~~SpDg-~~la~~~~~~~~~~~~l~~~~~~~--------g--~-~~~l~~~~~-~~~~~wspdg~-~l~~~~~~ 124 (347)
T 2gop_A 59 ENATMPRISPDG-KKIAFMRANEEKKVSEIWVADLET--------L--S-SKKILEAKN-IRSLEWNEDSR-KLLIVGFK 124 (347)
T ss_dssp ESCEEEEECTTS-SEEEEEEEETTTTEEEEEEEETTT--------T--E-EEEEEEESE-EEEEEECTTSS-EEEEEEEC
T ss_pred ccCCCeEECCCC-CEEEEEEeccCCCcceEEEEECCC--------C--c-eEEEEcCCC-ccceeECCCCC-EEEEEEcc
Confidence 567889999999 566665543 3 477777765 2 2 222332333 89999999998 5666653
Q ss_pred --------------------------CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC---
Q 020480 200 --------------------------DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ--- 250 (325)
Q Consensus 200 --------------------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg--- 250 (325)
...|.+||+..+. .+..+.. . .+..++|+|++ +++++..++
T Consensus 125 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~------~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~ 194 (347)
T 2gop_A 125 RREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE------VIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIP 194 (347)
T ss_dssp CCC---------CCCC---------CEEEEEEEETTTTE------EEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSC
T ss_pred CCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe------EEeeecC-C-CcccccCCCCe--EEEEEecccccc
Confidence 2568999998652 2233333 3 67889999987 666665542
Q ss_pred ----cEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc
Q 020480 251 ----YLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL 287 (325)
Q Consensus 251 ----~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~ 287 (325)
...||.+.+++ ...+..+ ..+..+ +|+|+.
T Consensus 195 ~~~~~~~l~~~d~~~----~~~l~~~-~~~~~~--spdg~~ 228 (347)
T 2gop_A 195 QYFKFWDIYIWEDGK----EEKMFEK-VSFYAV--DSDGER 228 (347)
T ss_dssp CSSCCEEEEEEETTE----EEEEEEE-ESEEEE--EECSSC
T ss_pred cccccccEEEeCCCc----eEEeccC-cceeeE--CCCCCE
Confidence 44566555332 4444444 445444 899873
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.50 E-value=1.6e-05 Score=66.66 Aligned_cols=153 Identities=7% Similarity=-0.080 Sum_probs=103.5
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
+...+.++++.+++ .++++...++.|..|+... .. ....+......+.++++.+++. ++++...++.|
T Consensus 55 ~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g---------~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i 122 (299)
T 2z2n_A 55 PDAKVMCLTISSDG-EVWFTENAANKIGRITKKG---------II-KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRI 122 (299)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTS---------CE-EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred ccCceeeEEECCCC-CEEEeCCCCCeEEEECCCC---------cE-EEEeCCCcCCCceeeEECCCCC-EEEEecCCceE
Confidence 45678899999988 5777766688999998753 11 1111223455789999999887 77777778899
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEEe
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSIL 281 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~~ 281 (325)
.+||. .+.. ...........+..+++.+++ .++++...++.|..||. +++ +..+ ......+.++++
T Consensus 123 ~~~d~-~g~~-----~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~----~~~~~~~~~~~~~~~i~~ 190 (299)
T 2z2n_A 123 GRITD-DGKI-----REYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGD----ITEFKIPTPASGPVGITK 190 (299)
T ss_dssp EEECT-TCCE-----EEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCC----EEEEECSSTTCCEEEEEE
T ss_pred EEECC-CCCE-----EEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCc----EEEeeCCCCCCcceeEEE
Confidence 99998 3321 111122234568899999987 67777777889999998 544 3332 233456889999
Q ss_pred CCCCCc--cCCCCceEEeeec
Q 020480 282 NASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 282 ~p~~~~--~~~~d~~~~~~~~ 300 (325)
+++|.+ +....+.+..++.
T Consensus 191 ~~~g~l~v~~~~~~~i~~~~~ 211 (299)
T 2z2n_A 191 GNDDALWFVEIIGNKIGRITT 211 (299)
T ss_dssp CTTSSEEEEETTTTEEEEECT
T ss_pred CCCCCEEEEccCCceEEEECC
Confidence 999886 2223556666654
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.45 E-value=5e-06 Score=69.73 Aligned_cols=144 Identities=8% Similarity=-0.079 Sum_probs=99.8
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcc
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSL 217 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~ 217 (325)
++|++++.++.|.+||..+ .+.+.++..+. ..+.++.+.|+++ +++ +.++.|..||. ++
T Consensus 6 ~~lv~~~~~~~v~~~d~~t----------G~~~w~~~~~~~~~~~~~~~~pdG~-ilv--s~~~~V~~~d~-~G------ 65 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDT----------KEIVWEYPLEKGWECNSVAATKAGE-ILF--SYSKGAKMITR-DG------ 65 (276)
T ss_dssp EEEEECTTCSEEEEEETTT----------TEEEEEEECCTTCCCCEEEECTTSC-EEE--ECBSEEEEECT-TS------
T ss_pred cEEEeeCCCCEEEEEECCC----------CeEEEEeCCCccCCCcCeEECCCCC-EEE--eCCCCEEEECC-CC------
Confidence 6899999999999999866 34467777665 4788999999998 777 45788999998 55
Q ss_pred cceEeeecC-CccEEEEEeecCCCcEEEEEec-CCcEEEEEccCCCCCCCeeEee------ccCCCeeEEEeCCCCCc--
Q 020480 218 EAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVV------AHQSEVGVSILNASFRL-- 287 (325)
Q Consensus 218 ~~~~~~~~~-~~~v~~v~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~------~h~~~v~~i~~~p~~~~-- 287 (325)
..+..+..+ ...+.++.+.|++ +++++.+. ++.|..+|. .++ .+..+. .+......+++.++|.+
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk---~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv 140 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGE---VLSKTEFETGIERPHAQFRQINKNKKGNYLV 140 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSC---EEEEEEECCSCSSGGGSCSCCEECTTSCEEE
T ss_pred CEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCC---EEEEEeccCCCCcccccccCceECCCCCEEE
Confidence 345666654 3578889999988 57777766 777777775 444 244442 12224556678888875
Q ss_pred cCCCCceEEeeecc-eeeecc
Q 020480 288 SHEDTCTCTHRHSR-YLLYKF 307 (325)
Q Consensus 288 ~~~~d~~~~~~~~~-~~~~~~ 307 (325)
+...++.+..++.. ...|.|
T Consensus 141 ~~~~~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 141 PLFATSEVREIAPNGQLLNSV 161 (276)
T ss_dssp EETTTTEEEEECTTSCEEEEE
T ss_pred EecCCCEEEEECCCCCEEEEE
Confidence 45567777777643 234444
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.44 E-value=7.1e-06 Score=69.43 Aligned_cols=145 Identities=10% Similarity=0.083 Sum_probs=94.5
Q ss_pred CCeeEEEecCCCCcEEEEEecC---------CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVS---------AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLS 196 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~d---------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s 196 (325)
..++.+++.|+| +++++.... ..-.||.+... + . ...+..+......++|+|++..++++
T Consensus 98 ~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-------g--~-~~~~~~~~~~pngi~~spdg~~lyv~ 166 (297)
T 3g4e_A 98 NRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPD-------H--H-VKKYFDQVDISNGLDWSLDHKIFYYI 166 (297)
T ss_dssp EEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTT-------S--C-EEEEEEEESBEEEEEECTTSCEEEEE
T ss_pred CCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECC-------C--C-EEEEeeccccccceEEcCCCCEEEEe
Confidence 347889999998 465543221 23445554430 1 1 22233333456899999999855667
Q ss_pred EeCCCcEEEEeCC--CCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 197 GSDDAQICLWDIN--AAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 197 ~s~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
.+.++.|.+||+. .+.. ........+..+......+++.++| ++.++....+.|..||..+++. +..+..+..
T Consensus 167 ~~~~~~i~~~~~d~~~G~~-~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~~---~~~i~~p~~ 241 (297)
T 3g4e_A 167 DSLSYSVDAFDYDLQTGQI-SNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGKR---LQTVKLPVD 241 (297)
T ss_dssp EGGGTEEEEEEECTTTCCE-EEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCCE---EEEEECSSS
T ss_pred cCCCCcEEEEeccCCCCcc-cCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCceE---EEEEECCCC
Confidence 7778999999974 3211 0001122233334567889999987 6888888888999999987773 666666667
Q ss_pred CeeEEEeC-CCCC
Q 020480 275 EVGVSILN-ASFR 286 (325)
Q Consensus 275 ~v~~i~~~-p~~~ 286 (325)
.+++++|. |++.
T Consensus 242 ~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 242 KTTSCCFGGKNYS 254 (297)
T ss_dssp BEEEEEEESGGGC
T ss_pred CceEEEEeCCCCC
Confidence 89999998 7765
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.44 E-value=3.1e-05 Score=71.65 Aligned_cols=140 Identities=11% Similarity=0.007 Sum_probs=98.7
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCC--CCCCCCc
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN--AAPKNKS 216 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~--~~~~~~~ 216 (325)
.++++...++.|.++|..+ .+.+.++.. ...+..+.++|++. ++++++.|+.|.+||+. +.
T Consensus 168 ~~~V~~~~~~~V~viD~~t----------~~v~~~i~~-g~~p~~v~~SpDGr-~lyv~~~dg~V~viD~~~~t~----- 230 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGST----------YEIKTVLDT-GYAVHISRLSASGR-YLFVIGRDGKVNMIDLWMKEP----- 230 (567)
T ss_dssp EEEEEETTTTEEEEEETTT----------CCEEEEEEC-SSCEEEEEECTTSC-EEEEEETTSEEEEEETTSSSC-----
T ss_pred eEEEEeCCCCeEEEEECCC----------CeEEEEEeC-CCCccceEECCCCC-EEEEEcCCCeEEEEECCCCCC-----
Confidence 5677778899999999987 344555543 34678999999999 78888999999999995 43
Q ss_pred ccceEeeecCCccEEEEEee----cCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec----------cCC-CeeEEEe
Q 020480 217 LEAMQIFKVHEGVVEDVAWH----LRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA----------HQS-EVGVSIL 281 (325)
Q Consensus 217 ~~~~~~~~~~~~~v~~v~~~----p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~----------h~~-~v~~i~~ 281 (325)
..+..+.. ......++|+ |+|..++++...++.|.++|..+.+. +..+.. |.. .+..+..
T Consensus 231 -~~v~~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~---~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 231 -TTVAEIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEP---KKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp -CEEEEEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCE---EEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred -cEeEEEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcE---EEEEeccccccccccccCCCceEEEEE
Confidence 23444443 3346789999 69876666777889999999888773 555431 222 5778888
Q ss_pred CCCCCc---cCCCCceEEeeec
Q 020480 282 NASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 282 ~p~~~~---~~~~d~~~~~~~~ 300 (325)
++++.. .....+.+.+.+.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~ 327 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDY 327 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEET
T ss_pred cCCCCEEEEEecCCCeEEEEec
Confidence 887552 3344556655554
No 199
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.39 E-value=1.4e-05 Score=76.70 Aligned_cols=154 Identities=8% Similarity=-0.017 Sum_probs=89.1
Q ss_pred eeEEEecCCCCcEEEEEecCC--------------eEEEEeCCCCCCCCCCCCCCCCcEEEe--cCCCceEEEEecCCCC
Q 020480 128 VNRARYMPQNPFLIATKTVSA--------------EVYVFDYSKHPSKPPLDGACSPDLRLR--GHSTEGYGLSWSKFKE 191 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg--------------~v~vwd~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~~p~~~ 191 (325)
+..++|+|+ . .|+.++.++ .|++|++.+ +.......+. .+...+.++.|+|+|.
T Consensus 211 ~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt--------~~~~~~lv~~~~~~~~~~~~~~~SpDG~ 280 (741)
T 1yr2_A 211 FSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGT--------PQSADQPVFATPELPKRGHGASVSSDGR 280 (741)
T ss_dssp SCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTS--------CGGGCEEEECCTTCTTCEEEEEECTTSC
T ss_pred eccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCC--------CchhCEEEeccCCCCeEEEEEEECCCCC
Confidence 357899998 4 455545443 388999865 2211222333 2334588999999998
Q ss_pred CeEEEEeCC-----CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec----CCcEEEEEccCCC-
Q 020480 192 GHLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----DQYLLIWDLRTPS- 261 (325)
Q Consensus 192 ~~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~----dg~i~iwd~~~~~- 261 (325)
+|+..+.+ ..|++||+..+.. .+...+..+...+.... +|++. .|+..+. .+.|.+||+.+..
T Consensus 281 -~l~~~~~~~~~~~~~l~~~d~~~~~~----~~~~~l~~~~~~~~~~~-~~dg~-~l~~~s~~~~~~~~l~~~d~~~~~~ 353 (741)
T 1yr2_A 281 -WVVITSSEGTDPVNTVHVARVTNGKI----GPVTALIPDLKAQWDFV-DGVGD-QLWFVSGDGAPLKKIVRVDLSGSTP 353 (741)
T ss_dssp -EEEEEEECTTCSCCEEEEEEEETTEE----CCCEEEECSSSSCEEEE-EEETT-EEEEEECTTCTTCEEEEEECSSSSC
T ss_pred -EEEEEEEccCCCcceEEEEECCCCCC----cccEEecCCCCceEEEE-eccCC-EEEEEECCCCCCCEEEEEeCCCCcc
Confidence 56655543 3899999876511 00233444444444443 47775 4444444 3459999987742
Q ss_pred CCCCeeEeeccCCCeeEEEeCCCCCc-cCCCCceEEeeec
Q 020480 262 VSKPVQSVVAHQSEVGVSILNASFRL-SHEDTCTCTHRHS 300 (325)
Q Consensus 262 ~~~~~~~~~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~~ 300 (325)
. ....+..+...+.+++|+.+..+ +...++..++|..
T Consensus 354 ~--~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 354 R--FDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAF 391 (741)
T ss_dssp E--EEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEE
T ss_pred c--cEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEE
Confidence 1 12233444455677888733222 5556777777644
No 200
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.35 E-value=0.00014 Score=62.28 Aligned_cols=140 Identities=9% Similarity=0.048 Sum_probs=89.4
Q ss_pred CeeEEEecCCCCcEEEEEec------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC
Q 020480 127 EVNRARYMPQNPFLIATKTV------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
.++.+.+.|+| +++++... .+.|..++ .. . ...+..+......++|+|++..++++.+.+
T Consensus 135 ~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~-~g---------~---~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~ 200 (326)
T 2ghs_A 135 RSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA-KG---------K---VTKLFADISIPNSICFSPDGTTGYFVDTKV 200 (326)
T ss_dssp EEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE-TT---------E---EEEEEEEESSEEEEEECTTSCEEEEEETTT
T ss_pred CCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe-CC---------c---EEEeeCCCcccCCeEEcCCCCEEEEEECCC
Confidence 57889999998 45554332 24566666 22 1 122222334567899999998445666677
Q ss_pred CcEEEEeCC--CC-CCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCee
Q 020480 201 AQICLWDIN--AA-PKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVG 277 (325)
Q Consensus 201 g~i~iwd~~--~~-~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 277 (325)
+.|.+||+. .+ .... ......+.........+++.+++ +++++...++.|..||. .++ .+..+..+...+.
T Consensus 201 ~~I~~~d~~~~~Gl~~~~-~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~-~g~---~~~~i~~~~~~~~ 274 (326)
T 2ghs_A 201 NRLMRVPLDARTGLPTGK-AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDT-DGN---HIARYEVPGKQTT 274 (326)
T ss_dssp CEEEEEEBCTTTCCBSSC-CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECT-TCC---EEEEEECSCSBEE
T ss_pred CEEEEEEcccccCCcccC-ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECC-CCC---EEEEEECCCCCcE
Confidence 899999986 33 2110 01122222334567789999987 67777667788999998 444 2566655566799
Q ss_pred EEEeC-CCCC
Q 020480 278 VSILN-ASFR 286 (325)
Q Consensus 278 ~i~~~-p~~~ 286 (325)
+++|. |++.
T Consensus 275 ~~af~g~d~~ 284 (326)
T 2ghs_A 275 CPAFIGPDAS 284 (326)
T ss_dssp EEEEESTTSC
T ss_pred EEEEecCCCC
Confidence 99998 7765
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.32 E-value=6.4e-05 Score=72.01 Aligned_cols=157 Identities=13% Similarity=0.046 Sum_probs=97.6
Q ss_pred cCCCeeEEEecCCCCcEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
+...+..+.|+|+| +.|+..+.+ ..|++||+.. +.......+..+...+.... +|++. .|+..+
T Consensus 266 ~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~--------~~~~~~~~l~~~~~~~~~~~-~~dg~-~l~~~s 334 (741)
T 1yr2_A 266 LPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTN--------GKIGPVTALIPDLKAQWDFV-DGVGD-QLWFVS 334 (741)
T ss_dssp CTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEET--------TEECCCEEEECSSSSCEEEE-EEETT-EEEEEE
T ss_pred CCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCC--------CCCcccEEecCCCCceEEEE-eccCC-EEEEEE
Confidence 33457899999999 566655544 3899999876 21121345555555555553 47887 566655
Q ss_pred C----CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccC-CCCCCCeeEeec-c
Q 020480 199 D----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT-PSVSKPVQSVVA-H 272 (325)
Q Consensus 199 ~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~-h 272 (325)
. ++.|.+||+..+. . .....+..+...+..++|. +..++++...|+..+||.+.. +. ....+.. +
T Consensus 335 ~~~~~~~~l~~~d~~~~~-~---~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~---~~~~l~~~~ 405 (741)
T 1yr2_A 335 GDGAPLKKIVRVDLSGST-P---RFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGK---PAGAVSLPG 405 (741)
T ss_dssp CTTCTTCEEEEEECSSSS-C---EEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSC---EEEECBCSS
T ss_pred CCCCCCCEEEEEeCCCCc-c---ccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC---ceeeccCCC
Confidence 4 3459999987642 0 1122233444556677887 346888999999988887662 33 2444443 3
Q ss_pred CCCeeEEEeCCCCCc------cCCCCceEEeeec
Q 020480 273 QSEVGVSILNASFRL------SHEDTCTCTHRHS 300 (325)
Q Consensus 273 ~~~v~~i~~~p~~~~------~~~~d~~~~~~~~ 300 (325)
...+..++++|++.. +....+++..|++
T Consensus 406 ~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 406 IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDP 439 (741)
T ss_dssp SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEET
T ss_pred CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEEC
Confidence 567889999998762 2233456666654
No 202
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.28 E-value=2.3e-05 Score=67.30 Aligned_cols=154 Identities=6% Similarity=-0.059 Sum_probs=99.0
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC-----CceEEEEecCCCCCeEE
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS-----TEGYGLSWSKFKEGHLL 195 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~-----~~v~~l~~~p~~~~~l~ 195 (325)
.+........+++++++ .++++...++.|.+||..+ .+....+.... .....+++ . +..+++
T Consensus 79 ~i~~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t----------~~~~~~i~~g~~~~~~~~p~~i~~-~-~~~lyv 145 (328)
T 3dsm_A 79 RITGFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKT----------YEITGYIECPDMDMESGSTEQMVQ-Y-GKYVYV 145 (328)
T ss_dssp EEECCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTT----------TEEEEEEECTTCCTTTCBCCCEEE-E-TTEEEE
T ss_pred EcCCCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCC----------CeEEEEEEcCCccccCCCcceEEE-E-CCEEEE
Confidence 34555778899998887 6666655789999999886 22233333221 14556777 3 442445
Q ss_pred EEe-CCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC----------CcEEEEEccCCCCCC
Q 020480 196 SGS-DDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD----------QYLLIWDLRTPSVSK 264 (325)
Q Consensus 196 s~s-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d----------g~i~iwd~~~~~~~~ 264 (325)
+.. .++.|.++|+.+++ ....+.. ......++++|++ .+++++..+ +.|.++|..+.+.
T Consensus 146 ~~~~~~~~v~viD~~t~~------~~~~i~~-g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v-- 215 (328)
T 3dsm_A 146 NCWSYQNRILKIDTETDK------VVDELTI-GIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAETFTV-- 215 (328)
T ss_dssp EECTTCCEEEEEETTTTE------EEEEEEC-SSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTTTEE--
T ss_pred EcCCCCCEEEEEECCCCe------EEEEEEc-CCCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCCCeE--
Confidence 444 48999999998763 3333332 2345678899987 566666554 7899999988763
Q ss_pred CeeEeecc-CCCeeEEEeCCCCCc--cCCCCceEEeeec
Q 020480 265 PVQSVVAH-QSEVGVSILNASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 265 ~~~~~~~h-~~~v~~i~~~p~~~~--~~~~d~~~~~~~~ 300 (325)
...+... ......++|+|++.. .+.. .+..++.
T Consensus 216 -~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~ 251 (328)
T 3dsm_A 216 -EKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPV 251 (328)
T ss_dssp -EEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEET
T ss_pred -EEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEEC
Confidence 4444322 346899999998773 2222 5656654
No 203
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.27 E-value=9.9e-05 Score=61.77 Aligned_cols=152 Identities=7% Similarity=-0.043 Sum_probs=102.1
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
....+.++.+.+++ +++++...++.|.+|+... ... ...+......+.++++.+++. ++++...++.|
T Consensus 18 ~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~---------~~~-~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~v 85 (300)
T 2qc5_A 18 PDSGPYGITSSEDG-KVWFTQHKANKISSLDQSG---------RIK-EFEVPTPDAKVMCLIVSSLGD-IWFTENGANKI 85 (300)
T ss_dssp TTCCEEEEEECTTS-CEEEEETTTTEEEEECTTS---------CEE-EEECSSTTCCEEEEEECTTSC-EEEEETTTTEE
T ss_pred CCCCcceeeECCCC-CEEEEcCCCCeEEEECCCC---------ceE-EEECCCCCCcceeEEECCCCC-EEEEecCCCeE
Confidence 45678899999988 5777766788999998763 011 112223346789999999887 77777778899
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEEe
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSIL 281 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~~ 281 (325)
..||.. +.. ...........+..+++.+++ .++++...++.|..+|.. ++ +..+ ......+.++++
T Consensus 86 ~~~d~~-g~~-----~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~----~~~~~~~~~~~~~~~i~~ 153 (300)
T 2qc5_A 86 GKLSKK-GGF-----TEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GT----IYEYDLPNKGSYPAFITL 153 (300)
T ss_dssp EEECTT-SCE-----EEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SC----EEEEECSSTTCCEEEEEE
T ss_pred EEECCC-CCe-----EEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CC----EEEccCCCCCCCceeEEE
Confidence 999987 321 111122234568899999887 577777778899999987 44 2322 223457899999
Q ss_pred CCCCCc--cCCCCceEEeee
Q 020480 282 NASFRL--SHEDTCTCTHRH 299 (325)
Q Consensus 282 ~p~~~~--~~~~d~~~~~~~ 299 (325)
+++|.+ +....+.+..++
T Consensus 154 d~~g~l~v~~~~~~~i~~~~ 173 (300)
T 2qc5_A 154 GSDNALWFTENQNNSIGRIT 173 (300)
T ss_dssp CTTSSEEEEETTTTEEEEEC
T ss_pred CCCCCEEEEecCCCeEEEEC
Confidence 999886 222344555544
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.27 E-value=0.00013 Score=61.11 Aligned_cols=152 Identities=7% Similarity=-0.094 Sum_probs=101.2
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~ 204 (325)
...+..+++.+++ .++++...++.|..++... ......+......+.++++.+++. ++++...++.|.
T Consensus 61 ~~~~~~i~~~~~g-~l~v~~~~~~~v~~~d~~g----------~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~ 128 (300)
T 2qc5_A 61 DAKVMCLIVSSLG-DIWFTENGANKIGKLSKKG----------GFTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIG 128 (300)
T ss_dssp TCCEEEEEECTTS-CEEEEETTTTEEEEECTTS----------CEEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEE
T ss_pred CCcceeEEECCCC-CEEEEecCCCeEEEECCCC----------CeEEecCCCCCCCCccceECCCCC-EEEEccCCCeEE
Confidence 4678899999988 5777766678899998763 111112222346789999999887 777777788999
Q ss_pred EEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe--eccCCCeeEEEeC
Q 020480 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV--VAHQSEVGVSILN 282 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~i~~~ 282 (325)
.+|.. +.. ....+......+..+++.+++ +++++...++.|..||. .++ +..+ ..+...+.+++++
T Consensus 129 ~~~~~-g~~-----~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~----~~~~~~~~~~~~~~~i~~d 196 (300)
T 2qc5_A 129 KLTAD-GTI-----YEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGK----LEEYPLPTNAAAPVGITSG 196 (300)
T ss_dssp EECTT-SCE-----EEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCC----EEEEECSSTTCCEEEEEEC
T ss_pred EECCC-CCE-----EEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCc----EEEeeCCCCCCCcceEEEC
Confidence 99987 321 111122234568899999987 57777767888999998 444 2223 2334568899999
Q ss_pred CCCCc--cCCCCceEEeeec
Q 020480 283 ASFRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 283 p~~~~--~~~~d~~~~~~~~ 300 (325)
++|.+ +....+.+..++.
T Consensus 197 ~~g~l~v~~~~~~~i~~~~~ 216 (300)
T 2qc5_A 197 NDGALWFVEIMGNKIGRITT 216 (300)
T ss_dssp TTSSEEEEETTTTEEEEECT
T ss_pred CCCCEEEEccCCCEEEEEcC
Confidence 99886 2223445555543
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.27 E-value=3.3e-05 Score=68.57 Aligned_cols=139 Identities=9% Similarity=-0.013 Sum_probs=94.2
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-----ecCCCce-E-EEEecCCCCCeEEE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-----RGHSTEG-Y-GLSWSKFKEGHLLS 196 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-----~~h~~~v-~-~l~~~p~~~~~l~s 196 (325)
....+.+++++|++..+++ +..++.|+.|+... +. ...+ .++...- . .++|+|++..++++
T Consensus 217 ~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~--------~~---~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~ 284 (409)
T 3hrp_A 217 FSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKT--------QE---VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMS 284 (409)
T ss_dssp SCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTT--------CC---EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEE
T ss_pred hcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCC--------CC---EEEEecccccCCCCCCccccEEEeCCCCEEEEE
Confidence 4466788999995535555 66788999999876 11 2222 1222222 3 99999965547777
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceEeeecC---------------CccEEEEEeecCCCcEEEEEe-cCCcEEEEEccCC
Q 020480 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVH---------------EGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTP 260 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~---------------~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~~~ 260 (325)
-..++.|+.|+.... +..+.++ -.....++++|++ +++++-. .++.|+.||+..+
T Consensus 285 d~~~~~I~~~~~~g~--------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 285 DQNLSSVYKITPDGE--------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp ETTTTEEEEECTTCC--------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEETTTT
T ss_pred eCCCCEEEEEecCCC--------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEECCCC
Confidence 778899999997642 1222222 1347889999997 5887887 8999999998766
Q ss_pred CCCCCeeEeecc---------------CCCeeEEEeCCCCCc
Q 020480 261 SVSKPVQSVVAH---------------QSEVGVSILNASFRL 287 (325)
Q Consensus 261 ~~~~~~~~~~~h---------------~~~v~~i~~~p~~~~ 287 (325)
. +..+.++ -.....|+++++|.+
T Consensus 356 ~----v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~l 393 (409)
T 3hrp_A 356 Y----VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGY 393 (409)
T ss_dssp E----EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEE
T ss_pred E----EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCE
Confidence 5 4554443 235788999998876
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.26 E-value=3.4e-05 Score=68.53 Aligned_cols=152 Identities=11% Similarity=0.062 Sum_probs=96.9
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC--cEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--QIC 204 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg--~i~ 204 (325)
....++|++++ +++++...++.|++||... + .+..+........ ++|+|++. .|+.+..++ .|.
T Consensus 132 ~P~~la~d~~g-~lyv~d~~~~~I~~id~~~--------g---~~~~~~~~~~~~~-ia~~~~g~-~l~~~d~~~~~~I~ 197 (409)
T 3hrp_A 132 YMWGIAAVGNN-TVLAYQRDDPRVRLISVDD--------N---KVTTVHPGFKGGK-PAVTKDKQ-RVYSIGWEGTHTVY 197 (409)
T ss_dssp CEEEEEECSTT-EEEEEETTTTEEEEEETTT--------T---EEEEEEETCCBCB-CEECTTSS-EEEEEBSSTTCEEE
T ss_pred CceEEEEeCCC-CEEEEecCCCcEEEEECCC--------C---EEEEeeccCCCCc-eeEecCCC-cEEEEecCCCceEE
Confidence 56789999988 6888877789999999875 1 1223322233344 99999998 777777765 788
Q ss_pred EEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-----eccCCC--e
Q 020480 205 LWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-----VAHQSE--V 276 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-----~~h~~~--v 276 (325)
+++....... ..+..... ....+.+++++|++..+++ +..++.|+.||..+.. ...+ .++... .
T Consensus 198 ~~d~~~~~~~---~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~----~~~~~~~~~~g~~~~~P~ 269 (409)
T 3hrp_A 198 VYMKASGWAP---TRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQE----VTLIKQLELSGSLGTNPG 269 (409)
T ss_dssp EEEGGGTTCE---EEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCC----EEEEEECCCCSCCCCSSC
T ss_pred EEEcCCCcee---EEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCC----EEEEecccccCCCCCCcc
Confidence 8887654220 01111112 4456788999995444554 6778899999998765 2222 112222 2
Q ss_pred eEEEeCCC-CCc--cCCCCceEEeeec
Q 020480 277 GVSILNAS-FRL--SHEDTCTCTHRHS 300 (325)
Q Consensus 277 ~~i~~~p~-~~~--~~~~d~~~~~~~~ 300 (325)
+.++|+|+ +.+ +......+..++.
T Consensus 270 ~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 270 PYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred ccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 39999994 665 3344556665543
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.21 E-value=0.00015 Score=69.00 Aligned_cols=139 Identities=10% Similarity=0.091 Sum_probs=86.3
Q ss_pred eEEEecCCCCcEEEEEecCC-------------eEEEEeCCCCCCCCCCCCCCCCcEEEe--c-CCCceEEEEecCCCCC
Q 020480 129 NRARYMPQNPFLIATKTVSA-------------EVYVFDYSKHPSKPPLDGACSPDLRLR--G-HSTEGYGLSWSKFKEG 192 (325)
Q Consensus 129 ~~v~~~~~~~~~la~g~~dg-------------~v~vwd~~~~~~~~~~~~~~~~~~~~~--~-h~~~v~~l~~~p~~~~ 192 (325)
..++|+ ++ +.|+.++.+. .|++|++.+ ........+. . |...+.++.|+|++..
T Consensus 178 ~~~~Ws-Dg-~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt--------~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~ 247 (693)
T 3iuj_A 178 SGISWL-GN-EGFFYSSYDKPDGSELSARTDQHKVYFHRLGT--------AQEDDRLVFGAIPAQHHRYVGATVTEDDRF 247 (693)
T ss_dssp CCCEEE-TT-TEEEEEESSCCC-------CCCCEEEEEETTS--------CGGGCEEEESCSGGGCCSEEEEEECTTSCE
T ss_pred ccEEEe-CC-CEEEEEEecCcccccccccCCCcEEEEEECCC--------CcccceEEEecCCCCCeEEEEEEEcCCCCE
Confidence 567899 88 4566656553 499999876 2222222232 3 4455788999999995
Q ss_pred eEEEEeCC---CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC---CcEEEEEccCCCCCCCe
Q 020480 193 HLLSGSDD---AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD---QYLLIWDLRTPSVSKPV 266 (325)
Q Consensus 193 ~l~s~s~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~ 266 (325)
++++.+.+ ..|+++|+..+.. ....+..+....... |++++..+++....+ +.|..+|+.++.. ...
T Consensus 248 l~~~~~~~~~~~~i~~~d~~~~~~-----~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~ 320 (693)
T 3iuj_A 248 LLISAANSTSGNRLYVKDLSQENA-----PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHW 320 (693)
T ss_dssp EEEEEESSSSCCEEEEEETTSTTC-----CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGC
T ss_pred EEEEEccCCCCcEEEEEECCCCCC-----ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccc
Confidence 55555432 5899999976532 233445555555444 666666666666554 5788999887652 113
Q ss_pred eEeeccCCCeeEEEeCCCCC
Q 020480 267 QSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 267 ~~~~~h~~~v~~i~~~p~~~ 286 (325)
..+..|...+. .|++++.
T Consensus 321 ~~l~~~~~~~~--~~s~~g~ 338 (693)
T 3iuj_A 321 RDLIPERQQVL--TVHSGSG 338 (693)
T ss_dssp EEEECCCSSCE--EEEEETT
T ss_pred EEEecCCCCEE--EEEEECC
Confidence 45555655554 7888776
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.17 E-value=6.2e-05 Score=63.79 Aligned_cols=141 Identities=6% Similarity=-0.055 Sum_probs=94.6
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
...........|+|++..+++++..++.|..|+... . ...+..+...+..+++++++. ++++...++
T Consensus 41 ~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g-----------~-~~~~~~~~~~~~gl~~d~dG~-l~v~~~~~~ 107 (305)
T 3dr2_A 41 YDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWREDG-----------T-VDVLLDATAFTNGNAVDAQQR-LVHCEHGRR 107 (305)
T ss_dssp ECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETTS-----------C-EEEEEESCSCEEEEEECTTSC-EEEEETTTT
T ss_pred ecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCCC-----------C-EEEEeCCCCccceeeECCCCC-EEEEECCCC
Confidence 345566778999999855888888899999998743 1 334555667789999999987 666666668
Q ss_pred cEEEEeCCCCCCCCcccceE-eeec-CCccEEEEEeecCCCcEEEE----Eec-------------CCcEEEEEccCCCC
Q 020480 202 QICLWDINAAPKNKSLEAMQ-IFKV-HEGVVEDVAWHLRHEYLFGS----VGD-------------DQYLLIWDLRTPSV 262 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~-~~~~-~~~~v~~v~~~p~~~~~l~s----~~~-------------dg~i~iwd~~~~~~ 262 (325)
.|.+|+.. +.. ..+. ...+ ....+++++++|+| .++++ |.. .+.|..+|..+++
T Consensus 108 ~v~~~~~~-g~~----~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~- 180 (305)
T 3dr2_A 108 AITRSDAD-GQA----HLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP- 180 (305)
T ss_dssp EEEEECTT-SCE----EEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC-
T ss_pred EEEEECCC-CCE----EEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc-
Confidence 89999975 321 1111 1111 12346789999987 57765 332 2457777776665
Q ss_pred CCCeeEeeccCCCeeEEEeCCCCC
Q 020480 263 SKPVQSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 263 ~~~~~~~~~h~~~v~~i~~~p~~~ 286 (325)
+..+. .....+.++|+|+++
T Consensus 181 ---~~~~~-~~~~p~gl~~spdg~ 200 (305)
T 3dr2_A 181 ---LQRMA-DLDHPNGLAFSPDEQ 200 (305)
T ss_dssp ---CEEEE-EESSEEEEEECTTSS
T ss_pred ---EEEEe-cCCCCcceEEcCCCC
Confidence 23333 445678899999997
No 209
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.17 E-value=0.00029 Score=59.35 Aligned_cols=153 Identities=6% Similarity=-0.035 Sum_probs=96.9
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~ 204 (325)
..-..+..|++++..++++...++.|+.|+... +. ...+ .....+.++++++++. ++++. ++.|.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~--------~~---~~~~-~~~~~~~~i~~~~dG~-l~v~~--~~~l~ 76 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFT--------KQ---VQRV-TMDAPVSSVALRQSGG-YVATI--GTKFC 76 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETTTTEEEEEETTT--------CC---EEEE-ECSSCEEEEEEBTTSS-EEEEE--TTEEE
T ss_pred CccccCCeEECCCCEEEEEECCCCEEEEEECCC--------Cc---EEEE-eCCCceEEEEECCCCC-EEEEE--CCeEE
Confidence 345567899997657888888889999999876 21 2223 2456789999999998 55543 56899
Q ss_pred EEeCCCCCCCCcccceEeeec--CCccEEEEEeecCCCcEEEEEecC---------CcEEEEEccCCCCCCCeeEeeccC
Q 020480 205 LWDINAAPKNKSLEAMQIFKV--HEGVVEDVAWHLRHEYLFGSVGDD---------QYLLIWDLRTPSVSKPVQSVVAHQ 273 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~h~ 273 (325)
+||..++.. ..+..... ....+++++++|++ +++++.... ..-.||.+..... +..+..+.
T Consensus 77 ~~d~~~g~~----~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~~~~~ 148 (297)
T 3g4e_A 77 ALNWKEQSA----VVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKYFDQV 148 (297)
T ss_dssp EEETTTTEE----EEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEEEEEE
T ss_pred EEECCCCcE----EEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCC---EEEEeecc
Confidence 999876521 11111111 23458899999998 466544322 3345666554332 33344444
Q ss_pred CCeeEEEeCCCCC-c--cCCCCceEEeeec
Q 020480 274 SEVGVSILNASFR-L--SHEDTCTCTHRHS 300 (325)
Q Consensus 274 ~~v~~i~~~p~~~-~--~~~~d~~~~~~~~ 300 (325)
...+.++|+|+++ + +.+..+.+..+++
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~ 178 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDY 178 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEE
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEec
Confidence 5678999999997 2 3334555666553
No 210
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.16 E-value=8.5e-05 Score=63.75 Aligned_cols=138 Identities=5% Similarity=-0.017 Sum_probs=90.6
Q ss_pred EeccCCCeeEEEecCCCCcEEEEEecC----------CeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceEEEEecCC
Q 020480 121 QINHDGEVNRARYMPQNPFLIATKTVS----------AEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSWSKF 189 (325)
Q Consensus 121 ~~~h~~~v~~v~~~~~~~~~la~g~~d----------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~~p~ 189 (325)
.+........+.+.|+| ++++++..+ +.|.++|..+ .+....+... ......++++|+
T Consensus 167 ~i~~g~~p~~i~~~~dG-~l~v~~~~~~~~~~~~~~~~~v~~id~~t----------~~v~~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 167 ELTIGIQPTSLVMDKYN-KMWTITDGGYEGSPYGYEAPSLYRIDAET----------FTVEKQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp EEECSSCBCCCEECTTS-EEEEEBCCBCTTCSSCBCCCEEEEEETTT----------TEEEEEEECCTTCCCEEEEECTT
T ss_pred EEEcCCCccceEEcCCC-CEEEEECCCccCCccccCCceEEEEECCC----------CeEEEEEecCCCCCceeEEEecC
Confidence 34444456788999988 566665544 7899999876 2223333321 236789999999
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEE----ecCCcEEEEEccCCCCCCC
Q 020480 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV----GDDQYLLIWDLRTPSVSKP 265 (325)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~----~~dg~i~iwd~~~~~~~~~ 265 (325)
+. .++.+.. .|.+||..++.... ...+.........++++|++..++++. ..++.|.+||.. ++ .
T Consensus 236 ~~-~lyv~~~--~v~~~d~~t~~~~~----~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~---~ 304 (328)
T 3dsm_A 236 RD-TLYWINN--DIWRMPVEADRVPV----RPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GK---L 304 (328)
T ss_dssp SC-EEEEESS--SEEEEETTCSSCCS----SCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CC---E
T ss_pred CC-EEEEEcc--EEEEEECCCCceee----eeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CC---E
Confidence 88 5666554 89999998764311 111111245688999999666788887 778999999998 65 3
Q ss_pred eeEeeccCCCeeEEEe
Q 020480 266 VQSVVAHQSEVGVSIL 281 (325)
Q Consensus 266 ~~~~~~h~~~v~~i~~ 281 (325)
+.++.. ......++|
T Consensus 305 ~~~i~~-G~~P~~~~~ 319 (328)
T 3dsm_A 305 IDEFYV-GIIPGAFCW 319 (328)
T ss_dssp EEEEEE-EESEEEEEE
T ss_pred EEEEEe-ccCcceEEE
Confidence 565542 233455555
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.16 E-value=0.00018 Score=61.59 Aligned_cols=150 Identities=11% Similarity=-0.002 Sum_probs=93.2
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
......|+|++..++++...++.|..|+... +. ...+. ....+.++.|++++. ++++. .+ .|.+|
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~--------~~---~~~~~-~~~~v~~i~~~~dg~-l~v~~-~~-gl~~~ 114 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLAS--------GR---KTVHA-LPFMGSALAKISDSK-QLIAS-DD-GLFLR 114 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTT--------TE---EEEEE-CSSCEEEEEEEETTE-EEEEE-TT-EEEEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCC--------Cc---EEEEE-CCCcceEEEEeCCCe-EEEEE-CC-CEEEE
Confidence 3467889998667888888889999999876 21 22222 345789999999987 55544 44 49999
Q ss_pred eCCCCCCCCcccceEeee--cCCccEEEEEeecCCCcEEEEEecC----CcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 207 DINAAPKNKSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDD----QYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
|..++.. ..+.... .....+++++++|++ +++++...+ +...||.+..++ +..+..+....+.++
T Consensus 115 d~~~g~~----~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~~g~----~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 115 DTATGVL----TLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVAKGK----VTKLFADISIPNSIC 185 (326)
T ss_dssp ETTTCCE----EEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEETTE----EEEEEEEESSEEEEE
T ss_pred ECCCCcE----EEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEeCCc----EEEeeCCCcccCCeE
Confidence 9876532 1111111 112468899999988 455544322 223444443332 333333445678999
Q ss_pred eCCCCC-c--cCCCCceEEeeec
Q 020480 281 LNASFR-L--SHEDTCTCTHRHS 300 (325)
Q Consensus 281 ~~p~~~-~--~~~~d~~~~~~~~ 300 (325)
|+|+|+ + +....+.+..++.
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~ 208 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPL 208 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEB
T ss_pred EcCCCCEEEEEECCCCEEEEEEc
Confidence 999997 2 3344566666664
No 212
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.13 E-value=4.7e-05 Score=64.39 Aligned_cols=122 Identities=8% Similarity=0.086 Sum_probs=84.9
Q ss_pred CCCeeEEEec----CCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCC---CcEEEecCC-CceEEEEecCCCCCeEEE
Q 020480 125 DGEVNRARYM----PQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACS---PDLRLRGHS-TEGYGLSWSKFKEGHLLS 196 (325)
Q Consensus 125 ~~~v~~v~~~----~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~---~~~~~~~h~-~~v~~l~~~p~~~~~l~s 196 (325)
....+.++++ |++..++++...++.|.+|+.... +... ....+.++. ..+..+++++++. ++++
T Consensus 171 ~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~-------g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~ 242 (314)
T 1pjx_A 171 FQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGP-------AKIENKKVWGHIPGTHEGGADGMDFDEDNN-LLVA 242 (314)
T ss_dssp ESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEET-------TEEEEEEEEEECCCCSSCEEEEEEEBTTCC-EEEE
T ss_pred CCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCC-------CccccceEEEECCCCCCCCCCceEECCCCC-EEEE
Confidence 3456788999 987445556567889999997520 1111 112233343 5678999999987 7888
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCC
Q 020480 197 GSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTP 260 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~ 260 (325)
...++.|.+||..++. .+..+..+...+.+++++|++..++++...++.|..|++...
T Consensus 243 ~~~~~~i~~~d~~~g~------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 243 NWGSSHIEVFGPDGGQ------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EETTTEEEEECTTCBS------CSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EcCCCEEEEEcCCCCc------EeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 7788999999987542 234445555779999999987446666677789999998754
No 213
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.06 E-value=6.6e-05 Score=71.37 Aligned_cols=144 Identities=13% Similarity=0.122 Sum_probs=86.4
Q ss_pred cCCCeeEEEecCCCCcEEEE-----EecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe
Q 020480 124 HDGEVNRARYMPQNPFLIAT-----KTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~-----g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s 198 (325)
|...+..++|+|+| ++||. |+....|+++|+.+ +..... .+.. .....++|+ ++. .|+.++
T Consensus 127 ~~~~l~~~~~SpDg-~~lAy~~~~~G~~~~~i~v~dl~t--------g~~~~~-~~~~--~k~~~~~Ws-Dg~-~l~y~~ 192 (693)
T 3iuj_A 127 GTTALDQLSFSRDG-RILAYSLSLAGSDWREIHLMDVES--------KQPLET-PLKD--VKFSGISWL-GNE-GFFYSS 192 (693)
T ss_dssp SCCEEEEEEECTTS-SEEEEEEECSSCCEEEEEEEETTT--------CSEEEE-EEEE--EESCCCEEE-TTT-EEEEEE
T ss_pred CcEEEEEEEECCCC-CEEEEEEecCCCceEEEEEEECCC--------CCCCcc-ccCC--ceeccEEEe-CCC-EEEEEE
Confidence 44467788999999 56663 22335799999987 322111 1211 112577899 988 576666
Q ss_pred CCC-------------cEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecC---CcEEEEEccCCC
Q 020480 199 DDA-------------QICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDD---QYLLIWDLRTPS 261 (325)
Q Consensus 199 ~dg-------------~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~d---g~i~iwd~~~~~ 261 (325)
.+. .|++|++.+..... ..+..... |...+..+.|+|++..++++.+.+ ..|+++|+.++.
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~--~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDD--RLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGC--EEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccc--eEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence 663 39999987753210 12222233 444578899999987565655533 578999998764
Q ss_pred CCCCeeEeeccCCCeeEEEeCCCCC
Q 020480 262 VSKPVQSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 262 ~~~~~~~~~~h~~~v~~i~~~p~~~ 286 (325)
. ....+..+....... |+++|.
T Consensus 271 ~--~~~~l~~~~~~~~~~-~~~~g~ 292 (693)
T 3iuj_A 271 A--PLLTVQGDLDADVSL-VDNKGS 292 (693)
T ss_dssp C--CCEEEECSSSSCEEE-EEEETT
T ss_pred C--ceEEEeCCCCceEEE-EeccCC
Confidence 2 245555555544444 444433
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.01 E-value=0.00016 Score=62.45 Aligned_cols=156 Identities=12% Similarity=0.042 Sum_probs=89.4
Q ss_pred CCeeEEEecCCCCcEEEEEe---cCCeEEEEeCCCCCCCCCCCC--CCCC---cEEEec--------------CCCceEE
Q 020480 126 GEVNRARYMPQNPFLIATKT---VSAEVYVFDYSKHPSKPPLDG--ACSP---DLRLRG--------------HSTEGYG 183 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~---~dg~v~vwd~~~~~~~~~~~~--~~~~---~~~~~~--------------h~~~v~~ 183 (325)
..++.+++.+++..++++.. .++.|.+||+..........+ ...+ .....+ ....+..
T Consensus 120 ~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 120 SFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred cccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 45689999986545666655 678999999875210000000 0000 000000 1124688
Q ss_pred EEecCCCCCeEEEEeCCC-cEEEEeCCCCCC--CCcccceE--eeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEcc
Q 020480 184 LSWSKFKEGHLLSGSDDA-QICLWDINAAPK--NKSLEAMQ--IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (325)
Q Consensus 184 l~~~p~~~~~l~s~s~dg-~i~iwd~~~~~~--~~~~~~~~--~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~ 258 (325)
++|+|++. .|+.+..++ .+..++...... ........ ...++......+++++++ +++++...++.|.+||..
T Consensus 200 ia~s~dg~-~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 200 IVLDAENE-WLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEECTTSC-EEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETT
T ss_pred eEeccCCC-EEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECC
Confidence 99999998 666666555 555554321100 00000000 111333456678999987 788898899999999985
Q ss_pred CCCCCCCeeEee--ccCCCeeEEEeCCCCCc
Q 020480 259 TPSVSKPVQSVV--AHQSEVGVSILNASFRL 287 (325)
Q Consensus 259 ~~~~~~~~~~~~--~h~~~v~~i~~~p~~~~ 287 (325)
+++ +..+. .+...+.+++|.+++.+
T Consensus 278 ~G~----~~~~~~~~~~~~p~~va~~~~g~l 304 (343)
T 2qe8_A 278 DRA----YKLLVTDEKLSWTDSFNFGSDGYL 304 (343)
T ss_dssp TTE----EEEEEECGGGSCEEEEEECTTSCE
T ss_pred CCC----EEEEEECCceecCCeeEECCCCcE
Confidence 444 33332 22456889999998875
No 215
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.99 E-value=0.00013 Score=63.01 Aligned_cols=130 Identities=15% Similarity=0.170 Sum_probs=82.0
Q ss_pred CceEEEEEeccCCCeeEEEecCCCCcEEEEEe--cCCeEEEEeCCCCCCCCCCCCCCCCc----EEEecCCCceEEEEec
Q 020480 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKT--VSAEVYVFDYSKHPSKPPLDGACSPD----LRLRGHSTEGYGLSWS 187 (325)
Q Consensus 114 ~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~--~dg~v~vwd~~~~~~~~~~~~~~~~~----~~~~~h~~~v~~l~~~ 187 (325)
+.++.+..+. .....++++++| +++++.. .++.++||.+.. +...+. .....|...+.+++++
T Consensus 7 g~~~~v~~~~--~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~--------g~~~~~p~~~~~~~~~~~~p~gv~~d 75 (343)
T 2qe8_A 7 DRLEVVAELS--LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQ--------DGLIPFPPQSGNAIITFDTVLGIKSD 75 (343)
T ss_dssp -CCEEEEEES--SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEET--------TEEEESCCCCSSCCCCCSCEEEEEEC
T ss_pred ceeEEEEEcC--CCcceEEECCCC-CEEEEeCCCCCCceEEEEECC--------CCeecCCCcccCcccceeEeeEEEEc
Confidence 3456555544 688999999998 6777753 234244444432 110000 0112355689999999
Q ss_pred CCCCCeEEEEeC-----CCcEEEEeCCCCCCCCcccceEeeec------CCccEEEEEeecCCCcEEEEEe---cCCcEE
Q 020480 188 KFKEGHLLSGSD-----DAQICLWDINAAPKNKSLEAMQIFKV------HEGVVEDVAWHLRHEYLFGSVG---DDQYLL 253 (325)
Q Consensus 188 p~~~~~l~s~s~-----dg~i~iwd~~~~~~~~~~~~~~~~~~------~~~~v~~v~~~p~~~~~l~s~~---~dg~i~ 253 (325)
+++. ++++-.. ++.|.+||+.+++ .+..+.. +...+..++++|++..++++.. .++.|.
T Consensus 76 ~~g~-L~v~D~g~~~~~~~~i~~~d~~tg~------~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~ 148 (343)
T 2qe8_A 76 GNGI-VWMLDNGNQSKSVPKLVAWDTLNNQ------LSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALI 148 (343)
T ss_dssp SSSE-EEEEECHHHHTSCCEEEEEETTTTE------EEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEE
T ss_pred CCCc-EEEEcCCCCcCCCCeEEEEECCCCe------EEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEE
Confidence 9976 5555433 5789999998763 2333321 2345688999986556667766 788999
Q ss_pred EEEccCCC
Q 020480 254 IWDLRTPS 261 (325)
Q Consensus 254 iwd~~~~~ 261 (325)
+||+.+++
T Consensus 149 v~d~~~g~ 156 (343)
T 2qe8_A 149 RVDLQTGL 156 (343)
T ss_dssp EEETTTCC
T ss_pred EEECCCCC
Confidence 99998665
No 216
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.91 E-value=0.0042 Score=51.19 Aligned_cols=154 Identities=8% Similarity=0.005 Sum_probs=96.7
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
.+..++|.+.+..++++-...+.|..++... . .....+.........+++++.+..++++-...+.|.++
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g--------~--~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~ 106 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHG--------G--EPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVA 106 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSS--------C--CCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCC--------C--CcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEE
Confidence 5678999997656777777788999999875 1 11222222235678999999766466666677899999
Q ss_pred eCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec--CCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeCC
Q 020480 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILNA 283 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~p 283 (325)
++..... .............++++|++..++++... .+.|..+++.... ...+ .......+.++++|
T Consensus 107 ~~~g~~~------~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~----~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 107 KMDGTQR------RVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN----RRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTSCSC------EEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC----CEEEECTTCSCEEEEEEET
T ss_pred EcCCCCE------EEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC----cEEEEECCCCCCcEEEEcC
Confidence 9875321 11111122457899999965556655544 4688888876433 2222 12234578899999
Q ss_pred CCC-c--cCCCCceEEeeec
Q 020480 284 SFR-L--SHEDTCTCTHRHS 300 (325)
Q Consensus 284 ~~~-~--~~~~d~~~~~~~~ 300 (325)
++. + +......+...+.
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~ 196 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNP 196 (267)
T ss_dssp TTTEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECCCCEEEEEec
Confidence 754 3 3334455555544
No 217
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.82 E-value=3e-06 Score=74.25 Aligned_cols=144 Identities=12% Similarity=0.058 Sum_probs=70.6
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCccc
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE 218 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 218 (325)
..+++++.||.|+.||..+ .+.+.++.. +.+.+..+..++. .+++++.||.|+.||..+++..
T Consensus 10 ~~v~~gs~dg~v~a~d~~t----------G~~~W~~~~--~~~~s~p~~~~g~-~~v~~s~dg~l~a~d~~tG~~~---- 72 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRT----------GSIKWTLKE--DPVLQVPTHVEEP-AFLPDPNDGSLYTLGSKNNEGL---- 72 (369)
T ss_dssp TEEEEEETTSEEEEEETTT----------CCEEEEEEC--CCSCCCC-----C-CEEECTTTCCEEEC-----CCS----
T ss_pred CEEEEEcCCCEEEEEECCC----------CCEEEEecC--CCceecceEcCCC-EEEEeCCCCEEEEEECCCCcee----
Confidence 5788899999999999887 233555554 4455555556665 6888889999999999877542
Q ss_pred ceEeeecCCc-cEEE-EEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC--ccCCCCce
Q 020480 219 AMQIFKVHEG-VVED-VAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR--LSHEDTCT 294 (325)
Q Consensus 219 ~~~~~~~~~~-~v~~-v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~--~~~~~d~~ 294 (325)
..+..+.. .+.+ .... .+ ..+++++.++.|+.||.++++. +..+..+. .+.++|.+. +.++.++.
T Consensus 73 --w~~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~---~w~~~~~~----~~~~~p~~~~v~~~~~dg~ 141 (369)
T 2hz6_A 73 --TKLPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEK---QQTLSSAF----ADSLSPSTSLLYLGRTEYT 141 (369)
T ss_dssp --EECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-----------------------------EEEEEEEEE
T ss_pred --eeeeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcE---EEEecCCC----cccccccCCEEEEEecCCE
Confidence 22221111 1100 0111 22 3567888899999999999884 55554332 133455443 26667778
Q ss_pred EEeeecc--eeeeccCee
Q 020480 295 CTHRHSR--YLLYKFPFF 310 (325)
Q Consensus 295 ~~~~~~~--~~~~~~~~~ 310 (325)
+..|+.+ ...|.++..
T Consensus 142 v~a~d~~tG~~~W~~~~~ 159 (369)
T 2hz6_A 142 ITMYDTKTRELRWNATYF 159 (369)
T ss_dssp EECCCSSSSSCCCEEEEE
T ss_pred EEEEECCCCCEEEeEecc
Confidence 8888754 345665543
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.77 E-value=0.00051 Score=58.09 Aligned_cols=152 Identities=9% Similarity=-0.020 Sum_probs=91.5
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-----CCceEEEEecCCCCCeEEE-
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-----STEGYGLSWSKFKEGHLLS- 196 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-----~~~v~~l~~~p~~~~~l~s- 196 (325)
.+...++.+++.++| +++++...++.|.+|+... . ...+..+ ...+.++.+.|++. +++|
T Consensus 83 ~~~~~~~gl~~d~dG-~l~v~~~~~~~v~~~~~~g---------~---~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td 148 (305)
T 3dr2_A 83 DATAFTNGNAVDAQQ-RLVHCEHGRRAITRSDADG---------Q---AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTD 148 (305)
T ss_dssp ESCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS---------C---EEEEECEETTEECSCCCCEEECTTSC-EEEEC
T ss_pred CCCCccceeeECCCC-CEEEEECCCCEEEEECCCC---------C---EEEEEeccCCCccCCCCCEEECCCCC-EEEeC
Confidence 355678999999998 5666655567899998753 1 1122111 13466899999998 7776
Q ss_pred ---EeC-------------CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC------CcEEE
Q 020480 197 ---GSD-------------DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD------QYLLI 254 (325)
Q Consensus 197 ---~s~-------------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d------g~i~i 254 (325)
|.. .+.|..+|..++.. . .+. .....+.++|+|++. .|+.+... +.|.+
T Consensus 149 ~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~------~-~~~-~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 149 PPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL------Q-RMA-DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp CSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC------E-EEE-EESSEEEEEECTTSS-EEEEEECCC---CCCEEEE
T ss_pred cCCCccccccccccccccCCCeEEEEcCCCCcE------E-EEe-cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEE
Confidence 332 25677777755422 1 112 234567899999985 44444443 78999
Q ss_pred EEccCCCCCCCeeEe-eccCCCeeEEEeCCCCCc-cCCCCceEEeee
Q 020480 255 WDLRTPSVSKPVQSV-VAHQSEVGVSILNASFRL-SHEDTCTCTHRH 299 (325)
Q Consensus 255 wd~~~~~~~~~~~~~-~~h~~~v~~i~~~p~~~~-~~~~d~~~~~~~ 299 (325)
|++..... .....+ .........++++++|.+ .+..+ .+.+++
T Consensus 220 ~~~~~~~l-~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~ 264 (305)
T 3dr2_A 220 FAWRDGAL-HDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFD 264 (305)
T ss_dssp EEEETTEE-EEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEEC
T ss_pred EEecCCCc-cCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEEC
Confidence 99875430 001111 112344567899999987 33333 355554
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.76 E-value=1.7e-06 Score=75.83 Aligned_cols=153 Identities=10% Similarity=0.015 Sum_probs=71.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc-eE-EEEecCCCCCeEEEEeCCCcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE-GY-GLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~-v~-~l~~~p~~~~~l~s~s~dg~i 203 (325)
+.+.+..+..++ .++++++.||.|+.||..+ + +.+..+..+... +. +.... .+. .+++++.++.+
T Consensus 38 ~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~t--------G--~~~w~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v 104 (369)
T 2hz6_A 38 DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKN--------N--EGLTKLPFTIPELVQASPCRS-SDG-ILYMGKKQDIW 104 (369)
T ss_dssp CCSCCCC------CCEEECTTTCCEEEC---------------CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEE
T ss_pred CCceecceEcCC-CEEEEeCCCCEEEEEECCC--------C--ceeeeeeccCccccccCceEe-cCC-EEEEEeCCCEE
Confidence 445454455555 5777778999999999866 2 223333222110 10 00111 233 67888889999
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
+.||.++++. +..+..+. ...++|.+ ..+++++.|+.|+.||.++++. +..+..+. ....++++
T Consensus 105 ~a~D~~tG~~------~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~tG~~---~W~~~~~~--~~~~~~~~ 168 (369)
T 2hz6_A 105 YVIDLLTGEK------QQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTKTREL---RWNATYFD--YAASLPED 168 (369)
T ss_dssp EEECCC---------------------------------EEEEEEEEEEECCCSSSSSC---CCEEEEEE--ECCBCCCC
T ss_pred EEEECCCCcE------EEEecCCC----cccccccC-CEEEEEecCCEEEEEECCCCCE---EEeEeccc--ccCccccC
Confidence 9999998854 33333332 13456655 5777889999999999999874 44443211 12223333
Q ss_pred C----CC-ccCCCCceEEeeecc--eeeecc
Q 020480 284 S----FR-LSHEDTCTCTHRHSR--YLLYKF 307 (325)
Q Consensus 284 ~----~~-~~~~~d~~~~~~~~~--~~~~~~ 307 (325)
+ +. +.++.++.+..++.. ...|.+
T Consensus 169 ~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~ 199 (369)
T 2hz6_A 169 DVDYKMSHFVSNGDGLVVTVDSESGDVLWIQ 199 (369)
T ss_dssp CTTCCCCEEEEETSCEEEEECTTTCCEEEEE
T ss_pred CccccceEEEECCCCEEEEEECCCCcEEEEe
Confidence 2 33 355667777777653 244544
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.69 E-value=0.0011 Score=58.66 Aligned_cols=153 Identities=10% Similarity=0.097 Sum_probs=96.1
Q ss_pred eeEEEecCCCCcEEEEEecC------CeEEEEeCCCCCCCCCCCCCCCCcEEEec--CC-CceEEEEecCCCCCeEEEEe
Q 020480 128 VNRARYMPQNPFLIATKTVS------AEVYVFDYSKHPSKPPLDGACSPDLRLRG--HS-TEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~d------g~v~vwd~~~~~~~~~~~~~~~~~~~~~~--h~-~~v~~l~~~p~~~~~l~s~s 198 (325)
-..+.+.|+| +++++..+ |.|.++|..+ .+.+.++.. .. ...+.+.|+|+++ .+++..
T Consensus 140 Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~T----------~~v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~ 206 (462)
T 2ece_A 140 LHTVHCGPDA--IYISALGNEEGEGPGGILMLDHYS----------FEPLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSE 206 (462)
T ss_dssp EEEEEECSSC--EEEEEEEETTSCSCCEEEEECTTT----------CCEEEECCSBCTTCCCCCCEEEETTTT-EEEECB
T ss_pred ccceeECCCe--EEEEcCCCcCCCCCCeEEEEECCC----------CeEEEEEccCCCCccccceEEECCCCC-EEEEcc
Confidence 3456778887 56665555 7899999886 344444431 11 2245688899998 777774
Q ss_pred -------------------CCCcEEEEeCCCCCCCCcccceEeeecC--CccEEEEEe--ecCCCcEEEEEe-----cCC
Q 020480 199 -------------------DDAQICLWDINAAPKNKSLEAMQIFKVH--EGVVEDVAW--HLRHEYLFGSVG-----DDQ 250 (325)
Q Consensus 199 -------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~--~~~v~~v~~--~p~~~~~l~s~~-----~dg 250 (325)
...+|.+||+.++ +.+.++... ......+.| +|++...++++- .++
T Consensus 207 wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss 280 (462)
T 2ece_A 207 WAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR------KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSS 280 (462)
T ss_dssp CCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT------EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCE
T ss_pred CcCccccccccchhhhhhccCCEEEEEECCCC------cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCc
Confidence 3789999999875 234444332 133455555 999876666666 778
Q ss_pred cEEEEEccCCCCCCCeeEe--ec----------------cCCCeeEEEeCCCCCc---cCCCCceEEeeec
Q 020480 251 YLLIWDLRTPSVSKPVQSV--VA----------------HQSEVGVSILNASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 251 ~i~iwd~~~~~~~~~~~~~--~~----------------h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~ 300 (325)
+|.+|....+. .+..+.+ .. -......|.++|+|++ +.-..+.+.++++
T Consensus 281 ~V~v~~~d~g~-~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 281 SIWLWFYEDGK-WNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EEEEEEEETTE-EEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEEC
T ss_pred eEEEEEecCCc-eeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEe
Confidence 88877665422 1111111 00 0245788999999994 4445567777765
No 221
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.64 E-value=0.0023 Score=55.85 Aligned_cols=92 Identities=9% Similarity=-0.123 Sum_probs=61.2
Q ss_pred eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe----------CCCcEEEEeCCCCCCCCccc
Q 020480 149 EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQICLWDINAAPKNKSLE 218 (325)
Q Consensus 149 ~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s----------~dg~i~iwd~~~~~~~~~~~ 218 (325)
.|.++|..+ .+.+.++.....+ .+.++|++. .++.+. .++.|.+||..+.+.
T Consensus 48 ~v~v~D~~t----------~~~~~~i~~g~~p--~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~----- 109 (373)
T 2mad_H 48 QQWVLDAGS----------GSILGHVNGGFLP--NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFDPVTFLP----- 109 (373)
T ss_pred EEEEEECCC----------CeEEEEecCCCCC--CeEECCCCC-EEEEEeccccccccCCCCCeEEEEECCCCcE-----
Confidence 889999876 2334555433333 999999999 566554 367899999986532
Q ss_pred ceEeeecC-------CccEEEEEeecCCCcEEEEEe-c-CCcEEEEEccCCC
Q 020480 219 AMQIFKVH-------EGVVEDVAWHLRHEYLFGSVG-D-DQYLLIWDLRTPS 261 (325)
Q Consensus 219 ~~~~~~~~-------~~~v~~v~~~p~~~~~l~s~~-~-dg~i~iwd~~~~~ 261 (325)
+..+... ......++|+|++. .|+++. . ++.|.++| .+++
T Consensus 110 -~~~i~~~~~~~~~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~viD-~t~~ 158 (373)
T 2mad_H 110 -IADIELPDAPRFDVGPYSWMNANTPNNA-DLLFFQFAAGPAVGLVV-QGGS 158 (373)
T ss_pred -EEEEECCCccccccCCCccceEECCCCC-EEEEEecCCCCeEEEEE-CCCC
Confidence 2222111 12345789999985 454444 3 58899999 8776
No 222
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.60 E-value=0.0063 Score=50.25 Aligned_cols=147 Identities=13% Similarity=0.053 Sum_probs=92.7
Q ss_pred ceEEEEEeccCCC--eeEEEecCCCCcEEEEEec--CCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCC
Q 020480 115 KVQIIQQINHDGE--VNRARYMPQNPFLIATKTV--SAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKF 189 (325)
Q Consensus 115 ~~~~~~~~~h~~~--v~~v~~~~~~~~~la~g~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~ 189 (325)
..+.+..+.|... ...+.|++++ .++++.+. ++.|+++|+.+ .+.+..+. +.......+++.
T Consensus 8 ~~~vv~~~p~~~~~f~~Gl~~~~dg-~Lyvstg~~~~s~v~~iD~~t----------g~v~~~i~l~~~~fgeGi~~~-- 74 (266)
T 2iwa_A 8 IVEVLNEFPHDPYAFTQGLVYAEND-TLFESTGLYGRSSVRQVALQT----------GKVENIHKMDDSYFGEGLTLL-- 74 (266)
T ss_dssp EEEEEEEEECCTTCCEEEEEECSTT-EEEEEECSTTTCEEEEEETTT----------CCEEEEEECCTTCCEEEEEEE--
T ss_pred CceEEEEEECCCCCCcccEEEeCCC-eEEEECCCCCCCEEEEEECCC----------CCEEEEEecCCCcceEEEEEe--
Confidence 4567788888754 5799999986 56666553 57999999987 23344443 122233455655
Q ss_pred CCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 190 KEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 190 ~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
+..++++.-.++.+.++|..+. ..+..+......-+. +++++..++++- .++.|.++|..+.+. +..+
T Consensus 75 g~~lyv~t~~~~~v~viD~~t~------~v~~~i~~g~~~g~g--lt~Dg~~l~vs~-gs~~l~viD~~t~~v---~~~I 142 (266)
T 2iwa_A 75 NEKLYQVVWLKNIGFIYDRRTL------SNIKNFTHQMKDGWG--LATDGKILYGSD-GTSILYEIDPHTFKL---IKKH 142 (266)
T ss_dssp TTEEEEEETTCSEEEEEETTTT------EEEEEEECCSSSCCE--EEECSSSEEEEC-SSSEEEEECTTTCCE---EEEE
T ss_pred CCEEEEEEecCCEEEEEECCCC------cEEEEEECCCCCeEE--EEECCCEEEEEC-CCCeEEEEECCCCcE---EEEE
Confidence 4436666667899999999876 334444322111223 455676666554 688999999988774 4444
Q ss_pred ec--cC---CCeeEEEeCCCCCc
Q 020480 270 VA--HQ---SEVGVSILNASFRL 287 (325)
Q Consensus 270 ~~--h~---~~v~~i~~~p~~~~ 287 (325)
.- .. ..++.+.|. +|++
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg~l 164 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NGEV 164 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TTEE
T ss_pred EECCCCcccccceeEEEE-CCEE
Confidence 31 11 236677887 6664
No 223
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.60 E-value=0.00042 Score=60.50 Aligned_cols=117 Identities=7% Similarity=-0.111 Sum_probs=76.9
Q ss_pred EecCCCCcEEEEEec----CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe---------
Q 020480 132 RYMPQNPFLIATKTV----SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS--------- 198 (325)
Q Consensus 132 ~~~~~~~~~la~g~~----dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s--------- 198 (325)
...|++..++++-.. ++.|.+.|..+ .+.+.++..-..+ . +.++|++..++++..
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t----------~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~ 106 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEA----------GRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGE 106 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTT----------TEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCC----------CeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCC
Confidence 445777544444333 67999999987 4445666544444 4 999999995444432
Q ss_pred CCCcEEEEeCCCCCCCCcccceEeeecC-------CccEEEEEeecCCCcEEEEEe-cCCcEEEEEccCCCCCCCeeEe
Q 020480 199 DDAQICLWDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
.++.|.+||..+.+ .+..+.-. ......++++|+|..++++.. .++.|.++|+.+.+. +.++
T Consensus 107 ~~~~VsviD~~t~~------v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~v---v~tI 176 (386)
T 3sjl_D 107 RTDYVEVFDPVTLL------PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAF---KRML 176 (386)
T ss_dssp EEEEEEEECTTTCC------EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEE---EEEE
T ss_pred CCCEEEEEECCCCe------EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcE---EEEE
Confidence 46789999998863 33333211 123557899999865554443 378999999999874 5554
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.59 E-value=0.0033 Score=54.90 Aligned_cols=108 Identities=12% Similarity=-0.075 Sum_probs=70.8
Q ss_pred EEEecCCCCcEEEEEe----------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCceEEEEecCCCCC
Q 020480 130 RARYMPQNPFLIATKT----------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STEGYGLSWSKFKEG 192 (325)
Q Consensus 130 ~v~~~~~~~~~la~g~----------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~~p~~~~ 192 (325)
.+.++|++. .++++. .++.|.+||..+ .+.+..+.-- ......+.|+|++.
T Consensus 70 ~i~~spDg~-~lyv~n~~~~~~~rg~~~~~v~viD~~t----------~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~- 137 (373)
T 2mad_H 70 NPVAAHSGS-EFALASTSFSRIAKGKRTDYVEVFDPVT----------FLPIADIELPDAPRFDVGPYSWMNANTPNNA- 137 (373)
T ss_pred CeEECCCCC-EEEEEeccccccccCCCCCeEEEEECCC----------CcEEEEEECCCccccccCCCccceEECCCCC-
Confidence 899999995 555543 367899999876 2333333211 12345899999999
Q ss_pred eEEEEeC--CCcEEEEeCCCCCCCCcccceEe-eecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 193 HLLSGSD--DAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 193 ~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
+|+.++. ++.|.++| .+++ .+.. +.. .. ++.+.|.+...+++.+.||.+.++|. +++
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~------~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGS------SDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCC------EEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 6666653 58899999 7763 2333 221 11 24455666667778888999999988 554
No 225
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.54 E-value=0.0013 Score=58.32 Aligned_cols=145 Identities=13% Similarity=0.069 Sum_probs=89.6
Q ss_pred eeEEEecCCCCcEEEEEe-------------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-C-CceEEEE-
Q 020480 128 VNRARYMPQNPFLIATKT-------------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-S-TEGYGLS- 185 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~-------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~-~~v~~l~- 185 (325)
-..+.|+|++ +.+++.. ...+|.+||+.. .+.+.++.-- . .....+.
T Consensus 190 ~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~----------~k~~~tI~vg~~g~~P~~i~f 258 (462)
T 2ece_A 190 AYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK----------RKRIHSLTLGEENRMALELRP 258 (462)
T ss_dssp CCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT----------TEEEEEEESCTTEEEEEEEEE
T ss_pred cceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCC----------CcEeeEEecCCCCCccceeEe
Confidence 3457889988 5666653 368999999986 2334444421 1 2334454
Q ss_pred -ecCCCCCeEEEEe-----CCCcEEEEeCCCCCCCCcccceEee--e----------------cCCccEEEEEeecCCCc
Q 020480 186 -WSKFKEGHLLSGS-----DDAQICLWDINAAPKNKSLEAMQIF--K----------------VHEGVVEDVAWHLRHEY 241 (325)
Q Consensus 186 -~~p~~~~~l~s~s-----~dg~i~iwd~~~~~~~~~~~~~~~~--~----------------~~~~~v~~v~~~p~~~~ 241 (325)
|+|++...++++- .+++|.+|....+.. ...+.+ . +-......+.++|++..
T Consensus 259 ~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~----~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf 334 (462)
T 2ece_A 259 LHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKW----NAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKF 334 (462)
T ss_dssp CSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEE----EEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCE
T ss_pred eECCCCCEEEEEEeeeccCCCceEEEEEecCCce----eEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCE
Confidence 4999995555555 778898877654211 111111 0 00235778999999977
Q ss_pred EEEEEecCCcEEEEEccCCCCCCCeeEeeccC--------------CCeeEEEeCCCCCc
Q 020480 242 LFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQ--------------SEVGVSILNASFRL 287 (325)
Q Consensus 242 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~--------------~~v~~i~~~p~~~~ 287 (325)
+.++.-..+.|.+||+......+.+..+.... ..-..++++|+|+.
T Consensus 335 LYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 335 LYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp EEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred EEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 77777788999999997443222343432211 13578999999984
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.44 E-value=0.001 Score=59.00 Aligned_cols=109 Identities=8% Similarity=-0.114 Sum_probs=71.1
Q ss_pred CCCcEEEEEecC----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe---------CCCc
Q 020480 136 QNPFLIATKTVS----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS---------DDAQ 202 (325)
Q Consensus 136 ~~~~~la~g~~d----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s---------~dg~ 202 (325)
++...+++...+ +.|.++|..+ .+.+.++..-..+ .+.++|++..++++.. .++.
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t----------~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~ 150 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGST----------GRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDY 150 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEE
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCC----------CEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCE
Confidence 343344444433 7999999987 4545666544444 8999999995444432 4678
Q ss_pred EEEEeCCCCCCCCcccceEeeecC-------CccEEEEEeecCCCcEEEEEec-CCcEEEEEccCCCC
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSV 262 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~ 262 (325)
|.++|..+.+ .+..+.-. ......+.++|++..++++... ++.|.+.|+.+.+.
T Consensus 151 VsviD~~t~~------vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kv 212 (426)
T 3c75_H 151 VEVFDPVTFL------PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTF 212 (426)
T ss_dssp EEEECTTTCC------EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEE
T ss_pred EEEEECCCCc------EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeE
Confidence 9999998873 33333211 1234568999998644444333 68999999999874
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.43 E-value=0.0098 Score=48.74 Aligned_cols=146 Identities=14% Similarity=0.180 Sum_probs=88.6
Q ss_pred ceEEEEEeccCCCe--eEEEecCCCCcEEEEEecCC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCC
Q 020480 115 KVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFK 190 (325)
Q Consensus 115 ~~~~~~~~~h~~~v--~~v~~~~~~~~~la~g~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~ 190 (325)
..+++..++|...- ..+.|+ ++ .++.+.+.+| .|+++|+.+ + +.+..+.-. .........+.+
T Consensus 30 ~~~vv~~~phd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~T--------g--kv~~~~~l~-~~~FgeGit~~g 96 (262)
T 3nol_A 30 DYQIVHSYPHDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIES--------G--KTLQQIELG-KRYFGEGISDWK 96 (262)
T ss_dssp EEEEEEEEECCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTT--------C--CEEEEEECC-TTCCEEEEEEET
T ss_pred ceEEEEEecCCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCC--------C--cEEEEEecC-CccceeEEEEeC
Confidence 45777888887554 778888 45 6888888776 899999987 2 334444322 223232222234
Q ss_pred CCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee
Q 020480 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (325)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 270 (325)
..+++..-.++.+.+||..+.+ .+.++.... .-+.++ +++..++++- .++.|.++|..+.+. +..+.
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~------~~~ti~~~~-eG~glt--~dg~~L~~Sd-Gs~~i~~iDp~T~~v---~~~I~ 163 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLR------QVRSFNYDG-EGWGLT--HNDQYLIMSD-GTPVLRFLDPESLTP---VRTIT 163 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCC------EEEEEECSS-CCCCEE--ECSSCEEECC-SSSEEEEECTTTCSE---EEEEE
T ss_pred CEEEEEEeeCCEEEEEECccCc------EEEEEECCC-CceEEe--cCCCEEEEEC-CCCeEEEEcCCCCeE---EEEEE
Confidence 4355555678999999998873 455554322 223444 4565566554 478899999998774 44432
Q ss_pred c--cC---CCeeEEEeCCCCCc
Q 020480 271 A--HQ---SEVGVSILNASFRL 287 (325)
Q Consensus 271 ~--h~---~~v~~i~~~p~~~~ 287 (325)
- .. ..++.+.|. +|++
T Consensus 164 V~~~g~~~~~lNELe~~-~G~l 184 (262)
T 3nol_A 164 VTAHGEELPELNELEWV-DGEI 184 (262)
T ss_dssp CEETTEECCCEEEEEEE-TTEE
T ss_pred eccCCccccccceeEEE-CCEE
Confidence 2 11 234556665 4554
No 228
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.42 E-value=0.032 Score=45.79 Aligned_cols=118 Identities=8% Similarity=0.013 Sum_probs=79.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeC--CCc
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSD--DAQ 202 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~--dg~ 202 (325)
.....+++.+.+..++++-...+.|.++++.. . ....+. ........++++|++..++++... .+.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g--------~---~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~ 147 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG--------T---QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPK 147 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------C---SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCE
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCC--------C---CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcE
Confidence 46788999997656777767788999999865 1 122222 222457899999976634444433 468
Q ss_pred EEEEeCCCCCCCCcccceEee-ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 203 ICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
|..+++.... ...+ ...-.....++++|++..++++-...+.|.++|+....
T Consensus 148 I~~~~~dg~~-------~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 148 IETSHMDGTN-------RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp EEEEETTSCC-------CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred EEEEecCCCC-------cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 8888876432 1111 12234578899999876777777788999999987543
No 229
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.40 E-value=0.0092 Score=48.96 Aligned_cols=145 Identities=10% Similarity=0.055 Sum_probs=90.2
Q ss_pred ceEEEEEeccCCCe--eEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCC
Q 020480 115 KVQIIQQINHDGEV--NRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEG 192 (325)
Q Consensus 115 ~~~~~~~~~h~~~v--~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~ 192 (325)
..+++..+.|...- ..+.|.. + .++.+.+.+|.|+++|+.+ + +.+..+.......-.++.. +..
T Consensus 42 ~~~Vv~~~phd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~T--------g--kv~~~~l~~~~FgeGit~~--g~~ 107 (268)
T 3nok_A 42 VAHIIREYPHATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLES--------A--QPVWMERLGNIFAEGLASD--GER 107 (268)
T ss_dssp EEEEEEEEECCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSC--------S--SCSEEEECTTCCEEEEEEC--SSC
T ss_pred ceEEEEEEcCCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCC--------C--cEEeEECCCCcceeEEEEe--CCE
Confidence 34667778886544 6788874 3 7888889999999999987 3 3344442211122335554 444
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec-
Q 020480 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA- 271 (325)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~- 271 (325)
+++..-.++.+.+||..+. +.+.++... ..-+.+++ ++..++++ ..++.|.++|..+.+. +.++.-
T Consensus 108 Ly~ltw~~~~v~V~D~~Tl------~~~~ti~~~-~eGwGLt~--Dg~~L~vS-dGs~~l~~iDp~T~~v---~~~I~V~ 174 (268)
T 3nok_A 108 LYQLTWTEGLLFTWSGMPP------QRERTTRYS-GEGWGLCY--WNGKLVRS-DGGTMLTFHEPDGFAL---VGAVQVK 174 (268)
T ss_dssp EEEEESSSCEEEEEETTTT------EEEEEEECS-SCCCCEEE--ETTEEEEE-CSSSEEEEECTTTCCE---EEEEECE
T ss_pred EEEEEccCCEEEEEECCcC------cEEEEEeCC-CceeEEec--CCCEEEEE-CCCCEEEEEcCCCCeE---EEEEEeC
Confidence 6666678899999999887 345555432 22345554 45445544 5689999999998874 444422
Q ss_pred -cC---CCeeEEEeCCCCCc
Q 020480 272 -HQ---SEVGVSILNASFRL 287 (325)
Q Consensus 272 -h~---~~v~~i~~~p~~~~ 287 (325)
+. ..++.+.|. +|++
T Consensus 175 ~~g~~v~~lNeLe~~-dG~l 193 (268)
T 3nok_A 175 LRGQPVELINELECA-NGVI 193 (268)
T ss_dssp ETTEECCCEEEEEEE-TTEE
T ss_pred CCCcccccccccEEe-CCEE
Confidence 21 234566666 4554
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.36 E-value=0.01 Score=48.96 Aligned_cols=144 Identities=6% Similarity=0.039 Sum_probs=90.5
Q ss_pred EEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCC
Q 020480 130 RARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDIN 209 (325)
Q Consensus 130 ~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~ 209 (325)
.+.+. +..++++.-.++.+.++|..+ .+.+.++..-...-..++ +++. .++.+..++.|.++|..
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t----------~~v~~~i~~g~~~g~glt--~Dg~-~l~vs~gs~~l~viD~~ 134 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRT----------LSNIKNFTHQMKDGWGLA--TDGK-ILYGSDGTSILYEIDPH 134 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTT----------TEEEEEEECCSSSCCEEE--ECSS-SEEEECSSSEEEEECTT
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCC----------CcEEEEEECCCCCeEEEE--ECCC-EEEEECCCCeEEEEECC
Confidence 34444 436677777789999999987 344555542212333444 4666 45555678999999998
Q ss_pred CCCCCCcccceEeee--cCC---ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc------------
Q 020480 210 AAPKNKSLEAMQIFK--VHE---GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH------------ 272 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~--~~~---~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h------------ 272 (325)
+.+. +..+. ... ..++.+.|. ++ .+++....++.|.+.|..+++. +..+...
T Consensus 135 t~~v------~~~I~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg~V---~~~I~~~g~~~~~~~~~~~ 203 (266)
T 2iwa_A 135 TFKL------IKKHNVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDGTL---LGWILLPNLRKKLIDEGFR 203 (266)
T ss_dssp TCCE------EEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTCCE---EEEEECHHHHHHHHHTTCT
T ss_pred CCcE------EEEEEECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCCcE---EEEEECCCccccccccccc
Confidence 7632 22222 111 236778888 55 5777776789999999999884 5555321
Q ss_pred -CCCeeEEEeCCCCC-c--cCCCCceEEeee
Q 020480 273 -QSEVGVSILNASFR-L--SHEDTCTCTHRH 299 (325)
Q Consensus 273 -~~~v~~i~~~p~~~-~--~~~~d~~~~~~~ 299 (325)
....+.|+|+|++. + ++.....+..-+
T Consensus 204 ~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~ 234 (266)
T 2iwa_A 204 DIDVLNGIAWDQENKRIFVTGKLWPKLFEIK 234 (266)
T ss_dssp TCCCEEEEEEETTTTEEEEEETTCSEEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEECCCCCeEEEEE
Confidence 13568999999876 2 444444444433
No 231
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.34 E-value=0.0037 Score=54.54 Aligned_cols=159 Identities=14% Similarity=0.008 Sum_probs=92.7
Q ss_pred EEEEEeccCCCeeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCc
Q 020480 117 QIIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STE 180 (325)
Q Consensus 117 ~~~~~~~h~~~v~~v~~~~~~~~~la~g~---------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~ 180 (325)
+.+..+.....-. +.++|++..++++.. .++.|.+||..+ .+.+..+.-- ...
T Consensus 70 ~v~~~I~vG~~P~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t----------~~v~~~I~v~~g~r~~~g~~ 138 (386)
T 3sjl_D 70 RVIGMIDGGFLPN-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVT----------LLPTADIELPDAPRFLVGTY 138 (386)
T ss_dssp EEEEEEEECSSCE-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCC
T ss_pred eEEEEEECCCCCc-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCC----------CeEEEEEECCCccccccCCC
Confidence 3334444332234 999999954545432 367899999987 3444444311 124
Q ss_pred eEEEEecCCCCCeEEEEeC--CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEcc
Q 020480 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~ 258 (325)
...+.++|++. +++.+.. ++.|.++|+.+.+ .+..+.-.. + .-..|.+...+++.+.||.+.+.++.
T Consensus 139 P~~~a~spDGk-~lyVan~~~~~~VsVID~~t~~------vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~ 207 (386)
T 3sjl_D 139 PWMTSLTPDGK-TLLFYQFSPAPAVGVVDLEGKA------FKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFG 207 (386)
T ss_dssp GGGEEECTTSS-EEEEEECSSSCEEEEEETTTTE------EEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CceEEEcCCCC-EEEEEEcCCCCeEEEEECCCCc------EEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECC
Confidence 56799999999 5665553 6899999999873 344443211 1 12235555677788889999999987
Q ss_pred C-CCCCCCeeEeecc----CCCe-eEEEeC-CCCCc-cCCCCceEEeeec
Q 020480 259 T-PSVSKPVQSVVAH----QSEV-GVSILN-ASFRL-SHEDTCTCTHRHS 300 (325)
Q Consensus 259 ~-~~~~~~~~~~~~h----~~~v-~~i~~~-p~~~~-~~~~d~~~~~~~~ 300 (325)
. ++. ......+ ..++ ....|. ++|++ ..+.++.+.+.+.
T Consensus 208 ~~g~v---~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~ 254 (386)
T 3sjl_D 208 TEGTP---EITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDL 254 (386)
T ss_dssp SSSCC---EEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEEC
T ss_pred CCCeE---EEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEEC
Confidence 6 442 2111111 1222 123553 56753 3444566666554
No 232
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.34 E-value=0.063 Score=46.21 Aligned_cols=144 Identities=7% Similarity=-0.002 Sum_probs=91.7
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
.....+..++|.+.+..++.+-...+.|..+++.. . .....+.........+++.+.+..++++-...+.
T Consensus 70 ~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g--------~--~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~ 139 (349)
T 3v64_C 70 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNG--------S--NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSR 139 (349)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------C--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTE
T ss_pred cCCCceEEEEEeccccEEEEEeccCCceEEEecCC--------C--CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCe
Confidence 34455789999987656777766778999999876 1 1122222222345688888766546677777789
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-CcEEEEEccCCCCCCCeeEe-eccCCCeeEEE
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSI 280 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~ 280 (325)
|.+.++..... .......-.....++++|.+..++.+-... +.|..+++.... ...+ ...-...+.|+
T Consensus 140 I~~~~~dG~~~------~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGla 209 (349)
T 3v64_C 140 IEVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLT 209 (349)
T ss_dssp EEEEETTSCSC------EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEESCCSSCSCEEEEE
T ss_pred EEEEcCCCCce------EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC----cEEEEECCCCCcceEE
Confidence 99999875421 112222334578999999765666666666 788888887544 2222 22234568899
Q ss_pred eCCCCC
Q 020480 281 LNASFR 286 (325)
Q Consensus 281 ~~p~~~ 286 (325)
|+|++.
T Consensus 210 ~d~~~~ 215 (349)
T 3v64_C 210 IDYAGR 215 (349)
T ss_dssp EETTTT
T ss_pred EeCCCC
Confidence 997443
No 233
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.24 E-value=0.046 Score=44.24 Aligned_cols=125 Identities=13% Similarity=0.080 Sum_probs=80.8
Q ss_pred CceEEEEEeccCCC--eeEEEecCCCCcEEEEEecCC--eEEEEeCCCCCCCCCCCCCCCCcEEEecCC-CceEEEEecC
Q 020480 114 GKVQIIQQINHDGE--VNRARYMPQNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLRLRGHS-TEGYGLSWSK 188 (325)
Q Consensus 114 ~~~~~~~~~~h~~~--v~~v~~~~~~~~~la~g~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~~p 188 (325)
...+++..++|... ...+.|.+ + .++.+.+..| .|+.+|+.+ + +.+..+.-.. ...-.++..
T Consensus 7 ~~~~v~~~~phd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~t--------g--kv~~~~~l~~~~fgeGi~~~- 73 (243)
T 3mbr_X 7 QGYRVVKRYPHDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLET--------G--RILQRAEVPPPYFGAGIVAW- 73 (243)
T ss_dssp CCEEEEEEEECCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTT--------C--CEEEEEECCTTCCEEEEEEE-
T ss_pred cceEEEEEcCCCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCC--------C--CEEEEEeCCCCcceeEEEEe-
Confidence 35678888898754 55899987 4 6777777754 899999987 2 3344433211 112334443
Q ss_pred CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC
Q 020480 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
+..+++..-.++.+.+||..+. ..+.++.... .-+.++ +++..+++|- .++.|.++|..+.+.
T Consensus 74 -~~~ly~ltw~~~~v~v~D~~tl------~~~~ti~~~~-~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 74 -RDRLIQLTWRNHEGFVYDLATL------TPRARFRYPG-EGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQ 136 (243)
T ss_dssp -TTEEEEEESSSSEEEEEETTTT------EEEEEEECSS-CCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCE
T ss_pred -CCEEEEEEeeCCEEEEEECCcC------cEEEEEeCCC-CceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeE
Confidence 4436666667899999999886 3455554322 224454 4565566554 588999999998774
No 234
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.24 E-value=0.0096 Score=54.60 Aligned_cols=163 Identities=7% Similarity=-0.073 Sum_probs=101.7
Q ss_pred EeccCCCeeEEEe-c-CCCCcEEEEEe------------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCc
Q 020480 121 QINHDGEVNRARY-M-PQNPFLIATKT------------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTE 180 (325)
Q Consensus 121 ~~~h~~~v~~v~~-~-~~~~~~la~g~------------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~ 180 (325)
.+........+++ . |++. ++.+++ .++.+.+.|..+ .+...++.--. .
T Consensus 129 ~ip~g~~phg~~~~~~p~~~-~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t----------~~v~~qI~Vgg-~ 196 (595)
T 1fwx_A 129 EIPNAKGIHGLRPQKWPRSN-YVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADK----------WEVAWQVLVSG-N 196 (595)
T ss_dssp ECSSCCSEEEEEECCSSBCS-EEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTT----------TEEEEEEEESS-C
T ss_pred eCCCCCCCcceeeeecCCCc-EEEEecccccccCCCCcccccccccCceEEEEECCC----------CeEEEEEEeCC-C
Confidence 5555567788887 4 7774 555553 345788888876 34444443211 3
Q ss_pred eEEEEecCCCCCeEEEEeCCC--------------------------------------cEEEEeCCCCCCCCcccc-eE
Q 020480 181 GYGLSWSKFKEGHLLSGSDDA--------------------------------------QICLWDINAAPKNKSLEA-MQ 221 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~dg--------------------------------------~i~iwd~~~~~~~~~~~~-~~ 221 (325)
...++.+|++. ++++.+.+. .|.|.|.++... .. +.
T Consensus 197 pd~~~~spdGk-~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~----~~~~~ 271 (595)
T 1fwx_A 197 LDNCDADYEGK-WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS----SLFTR 271 (595)
T ss_dssp CCCEEECSSSS-EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC----CSSEE
T ss_pred ccceEECCCCC-EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC----ceeEE
Confidence 45677899888 555555332 366666665211 11 22
Q ss_pred eeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC-----CC----CeeEeeccCCCeeEEEeCCCCCc--cCC
Q 020480 222 IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV-----SK----PVQSVVAHQSEVGVSILNASFRL--SHE 290 (325)
Q Consensus 222 ~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~-----~~----~~~~~~~h~~~v~~i~~~p~~~~--~~~ 290 (325)
.+.. .....++.++|+|..+++++..+..|.++|+.+.+. .. .+..+ .-......++|+|+|.+ +.-
T Consensus 272 ~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v-~vG~gP~h~aF~~dG~aY~t~~ 349 (595)
T 1fwx_A 272 YIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEP-ELGLGPLHTAFDGRGNAYTSLF 349 (595)
T ss_dssp EEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECC-BCCSCEEEEEECTTSEEEEEET
T ss_pred EEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEc-CCCCCcceEEECCCCeEEEEEe
Confidence 2221 224567899999988888888999999999996420 00 11122 22345788999999963 566
Q ss_pred CCceEEeeecce
Q 020480 291 DTCTCTHRHSRY 302 (325)
Q Consensus 291 ~d~~~~~~~~~~ 302 (325)
.|+++..|++..
T Consensus 350 ldsqV~kwdi~~ 361 (595)
T 1fwx_A 350 LDSQVVKWNIED 361 (595)
T ss_dssp TTTEEEEEEHHH
T ss_pred cCCcEEEEEhhH
Confidence 788888898754
No 235
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.24 E-value=0.044 Score=47.90 Aligned_cols=143 Identities=7% Similarity=-0.036 Sum_probs=89.9
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
.....+..++|.+.+..++.+-...+.|+.+++.. .....+ .........+++.+.+..++++-...+
T Consensus 113 ~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g-----------~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~ 181 (386)
T 3v65_B 113 NNLENAIALDFHHRRELVFWSDVTLDRILRANLNG-----------SNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTS 181 (386)
T ss_dssp CSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-----------CCEEEEECSSCSCCCCEEEETTTTEEEEEETTTT
T ss_pred cCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCC-----------CCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCC
Confidence 34456788999986656777766778999999875 112222 222234567888876664667767778
Q ss_pred cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-CcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
.|.+.++..... ...+...-.....++++|.+..++.+-... +.|..+++..... .......-...+.|+
T Consensus 182 ~I~~~~~dg~~~------~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~---~~~~~~~~~~PnGla 252 (386)
T 3v65_B 182 RIEVANLDGAHR------KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR---RIIADTHLFWPNGLT 252 (386)
T ss_dssp EEEECBTTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEE
T ss_pred eEEEEeCCCCce------EEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc---EEEEECCCCCeeeEE
Confidence 899988875421 112222335678999999766666666555 7888888765442 222222234568899
Q ss_pred eCCCC
Q 020480 281 LNASF 285 (325)
Q Consensus 281 ~~p~~ 285 (325)
|+|++
T Consensus 253 vd~~~ 257 (386)
T 3v65_B 253 IDYAG 257 (386)
T ss_dssp EEGGG
T ss_pred EeCCC
Confidence 98644
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.18 E-value=0.015 Score=47.71 Aligned_cols=137 Identities=11% Similarity=0.127 Sum_probs=85.7
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~ 204 (325)
..........+.+..++++.-.++.+.+||..+ .+.+.++.. ...-..++ +++. .|+.+..++.|.
T Consensus 84 ~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t----------~~~~~ti~~-~~eG~glt--~dg~-~L~~SdGs~~i~ 149 (262)
T 3nol_A 84 GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRN----------LRQVRSFNY-DGEGWGLT--HNDQ-YLIMSDGTPVLR 149 (262)
T ss_dssp CTTCCEEEEEEETTEEEEEESSSSEEEEEETTT----------CCEEEEEEC-SSCCCCEE--ECSS-CEEECCSSSEEE
T ss_pred CCccceeEEEEeCCEEEEEEeeCCEEEEEECcc----------CcEEEEEEC-CCCceEEe--cCCC-EEEEECCCCeEE
Confidence 334444333334545666666789999999987 444555653 22334454 4565 455556678899
Q ss_pred EEeCCCCCCCCcccceEeeec--CC---ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-------
Q 020480 205 LWDINAAPKNKSLEAMQIFKV--HE---GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH------- 272 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~--~~---~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h------- 272 (325)
++|..+.+. +..+.- .. ..++.+.|. ++ .+++..-.++.|.+.|.++++. +..+...
T Consensus 150 ~iDp~T~~v------~~~I~V~~~g~~~~~lNELe~~-~G-~lyan~w~~~~I~vIDp~tG~V---~~~Id~~~L~~~~~ 218 (262)
T 3nol_A 150 FLDPESLTP------VRTITVTAHGEELPELNELEWV-DG-EIFANVWQTNKIVRIDPETGKV---TGIIDLNGILAEAG 218 (262)
T ss_dssp EECTTTCSE------EEEEECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEECTTTCBE---EEEEECTTGGGGSC
T ss_pred EEcCCCCeE------EEEEEeccCCccccccceeEEE-CC-EEEEEEccCCeEEEEECCCCcE---EEEEECCcCccccc
Confidence 999987643 222221 11 335567776 55 5777776789999999999884 4444321
Q ss_pred -----CCCeeEEEeCCCCC
Q 020480 273 -----QSEVGVSILNASFR 286 (325)
Q Consensus 273 -----~~~v~~i~~~p~~~ 286 (325)
..-.+.|||+|++.
T Consensus 219 ~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 219 PLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp SCCSSCCCEEEEEEETTTT
T ss_pred cccCcCCceEEEEEcCCCC
Confidence 13568999999765
No 237
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.12 E-value=0.016 Score=51.31 Aligned_cols=121 Identities=14% Similarity=0.042 Sum_probs=73.5
Q ss_pred EEEEEeccCCCeeEEEecCCCCcEEEEEe---------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-------CCc
Q 020480 117 QIIQQINHDGEVNRARYMPQNPFLIATKT---------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-------STE 180 (325)
Q Consensus 117 ~~~~~~~h~~~v~~v~~~~~~~~~la~g~---------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-------~~~ 180 (325)
+.+..+.-...- .+.++|++..++++.. .++.|.++|..+ .+.+..+.-- ...
T Consensus 110 ~vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t----------~~vv~~I~v~g~~r~~~g~~ 178 (426)
T 3c75_H 110 RILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVT----------FLPIADIELPDAPRFLVGTY 178 (426)
T ss_dssp EEEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTT----------CCEEEEEEETTCCCCCBSCC
T ss_pred EEEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCC----------CcEEEEEECCCccccccCCC
Confidence 333444433233 8999999954554432 467899999987 3444444311 123
Q ss_pred eEEEEecCCCCCeEEEEeC--CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEcc
Q 020480 181 GYGLSWSKFKEGHLLSGSD--DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~ 258 (325)
...+.++|++. +++.+.. ++.|.+.|+.+.+ .+..+.--. . ....|.+...+++.+.||.+.+.++.
T Consensus 179 P~~~~~spDGk-~lyV~n~~~~~~VsVID~~t~k------vv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~ 247 (426)
T 3c75_H 179 QWMNALTPDNK-NLLFYQFSPAPAVGVVDLEGKT------FDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFA 247 (426)
T ss_dssp GGGSEECTTSS-EEEEEECSSSCEEEEEETTTTE------EEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECC
T ss_pred cceEEEcCCCC-EEEEEecCCCCeEEEEECCCCe------EEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECC
Confidence 56789999999 5666653 6889999999873 333333211 1 22344444566666777777777764
Q ss_pred C
Q 020480 259 T 259 (325)
Q Consensus 259 ~ 259 (325)
.
T Consensus 248 ~ 248 (426)
T 3c75_H 248 D 248 (426)
T ss_dssp T
T ss_pred C
Confidence 3
No 238
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.10 E-value=0.043 Score=46.40 Aligned_cols=138 Identities=9% Similarity=-0.006 Sum_probs=83.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec--------------------CCCceEEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG--------------------HSTEGYGLS 185 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~l~ 185 (325)
.....+++.+++ +++.++..++.|..|+... +. ...+.. ....+..++
T Consensus 19 ~~p~~i~~d~~g-~~l~v~~~~~~i~~~~~~~--------~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~ 86 (322)
T 2fp8_A 19 YAPNSFTFDSTN-KGFYTSVQDGRVIKYEGPN--------SG---FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDIS 86 (322)
T ss_dssp SCCCCEECCTTC-SSEEEECTTSEEEEECCTT--------TC---EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEE
T ss_pred CCceEEEEcCCC-CEEEEEcCCCeEEEECCCC--------Cc---eEEEecccccccccccccccchhccccCCCCceEE
Confidence 345678899887 6677778889999998765 11 222210 013578899
Q ss_pred ecC-CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEe-eec-CCccEEEEEeec-CCCcEEEEEec-------------
Q 020480 186 WSK-FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV-HEGVVEDVAWHL-RHEYLFGSVGD------------- 248 (325)
Q Consensus 186 ~~p-~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~-~~~~v~~v~~~p-~~~~~l~s~~~------------- 248 (325)
+.+ ++. |+.+...+.|..+|...+.. ..+.. ..+ .....+.+++.+ ++ +++++-..
T Consensus 87 ~~~~~g~--l~v~d~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~ 159 (322)
T 2fp8_A 87 YNLQNNQ--LYIVDCYYHLSVVGSEGGHA----TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMD 159 (322)
T ss_dssp EETTTTE--EEEEETTTEEEEECTTCEEC----EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHH
T ss_pred EcCCCCc--EEEEECCCCEEEEeCCCCEE----EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehc
Confidence 997 554 55555555688888764321 11111 111 113478899999 87 56655432
Q ss_pred ----CCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC
Q 020480 249 ----DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR 286 (325)
Q Consensus 249 ----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~ 286 (325)
++.|..||..+++ +..+.......+.|+|+|+|.
T Consensus 160 ~~~~~g~v~~~d~~~~~----~~~~~~~~~~p~gia~~~dg~ 197 (322)
T 2fp8_A 160 TSDKTGRLIKYDPSTKE----TTLLLKELHVPGGAEVSADSS 197 (322)
T ss_dssp HTCCCEEEEEEETTTTE----EEEEEEEESCCCEEEECTTSS
T ss_pred ccCCCceEEEEeCCCCE----EEEeccCCccCcceEECCCCC
Confidence 3678888876654 233222224467899999986
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.95 E-value=0.019 Score=48.45 Aligned_cols=147 Identities=7% Similarity=-0.056 Sum_probs=90.4
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~ 204 (325)
...+.++...+++ .+ ..++ +.|..+| .. ......+......+.++...+++. +..++.++.+.
T Consensus 176 ~~~~~~~~~d~~g-~l-~v~t--~~l~~~d-~~----------g~~~~~~~~~~~~~~~~~~~~~g~--l~v~t~~~gl~ 238 (330)
T 3hxj_A 176 DAITSAASIGKDG-TI-YFGS--DKVYAIN-PD----------GTEKWNFYAGYWTVTRPAISEDGT--IYVTSLDGHLY 238 (330)
T ss_dssp SCCCSCCEECTTC-CE-EEES--SSEEEEC-TT----------SCEEEEECCSSCCCSCCEECTTSC--EEEEETTTEEE
T ss_pred CCceeeeEEcCCC-EE-EEEe--CEEEEEC-CC----------CcEEEEEccCCcceeceEECCCCe--EEEEcCCCeEE
Confidence 3456666666666 34 4444 7788898 43 122334444445677788887765 66677788888
Q ss_pred EEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCC
Q 020480 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNAS 284 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~ 284 (325)
.+|.. + ..+..+......+..+...+++ .+..++.+|.|..+|. +++ .+..+......+.++...++
T Consensus 239 ~~~~~-g------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~g~---~~~~~~~~~~~~~~~~~d~~ 305 (330)
T 3hxj_A 239 AINPD-G------TEKWRFKTGKRIESSPVIGNTD--TIYFGSYDGHLYAINP-DGT---EKWNFETGSWIIATPVIDEN 305 (330)
T ss_dssp EECTT-S------CEEEEEECSSCCCSCCEECTTS--CEEEECTTCEEEEECT-TSC---EEEEEECSSCCCSCCEECTT
T ss_pred EECCC-C------CEeEEeeCCCCccccceEcCCC--eEEEecCCCCEEEECC-CCc---EEEEEEcCCccccceEEcCC
Confidence 88743 2 1233343333334445555544 4567888889999995 444 24555444556778888888
Q ss_pred CCc-cCCCCceEEeeecc
Q 020480 285 FRL-SHEDTCTCTHRHSR 301 (325)
Q Consensus 285 ~~~-~~~~d~~~~~~~~~ 301 (325)
|.+ .++.++.+.+....
T Consensus 306 g~l~~gt~~G~~~~~~~~ 323 (330)
T 3hxj_A 306 GTIYFGTRNGKFYALFNL 323 (330)
T ss_dssp CCEEEECTTSCEEEEEC-
T ss_pred CEEEEEcCCCeEEEEecc
Confidence 886 77778877765443
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.95 E-value=0.018 Score=48.50 Aligned_cols=146 Identities=8% Similarity=-0.057 Sum_probs=88.9
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
....+.++...+++ .+..|+.++.|..+|... .....+......+.++...+++. +..++ +.|
T Consensus 135 ~~~~~~~~~~~~~g--~l~vgt~~~~l~~~d~~g-----------~~~~~~~~~~~~~~~~~~d~~g~--l~v~t--~~l 197 (330)
T 3hxj_A 135 KKAIYATPIVSEDG--TIYVGSNDNYLYAINPDG-----------TEKWRFKTNDAITSAASIGKDGT--IYFGS--DKV 197 (330)
T ss_dssp SSCCCSCCEECTTS--CEEEECTTSEEEEECTTS-----------CEEEEEECSSCCCSCCEECTTCC--EEEES--SSE
T ss_pred CCceeeeeEEcCCC--EEEEEcCCCEEEEECCCC-----------CEeEEEecCCCceeeeEEcCCCE--EEEEe--CEE
Confidence 33445566666665 366677888999998763 22334443444566677766665 44445 889
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
..+| ..+. ....+......+.++...+++ . +..++.++.|..+|. ++. .+..+......+.++.+.+
T Consensus 198 ~~~d-~~g~------~~~~~~~~~~~~~~~~~~~~g-~-l~v~t~~~gl~~~~~-~g~---~~~~~~~~~~~~~~~~~~~ 264 (330)
T 3hxj_A 198 YAIN-PDGT------EKWNFYAGYWTVTRPAISEDG-T-IYVTSLDGHLYAINP-DGT---EKWRFKTGKRIESSPVIGN 264 (330)
T ss_dssp EEEC-TTSC------EEEEECCSSCCCSCCEECTTS-C-EEEEETTTEEEEECT-TSC---EEEEEECSSCCCSCCEECT
T ss_pred EEEC-CCCc------EEEEEccCCcceeceEECCCC-e-EEEEcCCCeEEEECC-CCC---EeEEeeCCCCccccceEcC
Confidence 9999 5442 233344444567778887765 3 446677788888874 333 2455544444455677777
Q ss_pred CCCc-cCCCCceEEeee
Q 020480 284 SFRL-SHEDTCTCTHRH 299 (325)
Q Consensus 284 ~~~~-~~~~d~~~~~~~ 299 (325)
++.+ .++.++.+..++
T Consensus 265 ~g~l~v~t~~ggl~~~d 281 (330)
T 3hxj_A 265 TDTIYFGSYDGHLYAIN 281 (330)
T ss_dssp TSCEEEECTTCEEEEEC
T ss_pred CCeEEEecCCCCEEEEC
Confidence 7776 566665565555
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.94 E-value=0.014 Score=55.09 Aligned_cols=75 Identities=13% Similarity=0.009 Sum_probs=49.9
Q ss_pred CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-CCCeeEE
Q 020480 201 AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-QSEVGVS 279 (325)
Q Consensus 201 g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~i 279 (325)
|.|..||+.+++ .+..+. +...+....+.+.+ .+++.++.||.+++||.++++. +..+... .....-+
T Consensus 457 g~l~A~D~~tG~------~~W~~~-~~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~---lw~~~~~~~~~~~p~ 525 (677)
T 1kb0_A 457 GRLLAWDPVAQK------AAWSVE-HVSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEK---LWEAPTGTGVVAAPS 525 (677)
T ss_dssp EEEEEEETTTTE------EEEEEE-ESSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEECSSCCCSCCE
T ss_pred cEEEEEeCCCCc------EEeecC-CCCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCce---eeeeeCCCCcccCCE
Confidence 779999998874 344433 22334444555665 4677789999999999999984 7776532 2233446
Q ss_pred EeCCCCC
Q 020480 280 ILNASFR 286 (325)
Q Consensus 280 ~~~p~~~ 286 (325)
.|.++|+
T Consensus 526 ~y~~~G~ 532 (677)
T 1kb0_A 526 TYMVDGR 532 (677)
T ss_dssp EEEETTE
T ss_pred EEEeCCE
Confidence 6767776
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.94 E-value=0.04 Score=44.60 Aligned_cols=126 Identities=20% Similarity=0.210 Sum_probs=82.1
Q ss_pred CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCC
Q 020480 136 QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK 215 (325)
Q Consensus 136 ~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~ 215 (325)
.+.++++..-.++.+.+||..+ .+.+.++.. ...-..+++ ++. .|+.+..++.|.++|..+.+.
T Consensus 73 ~~~~ly~ltw~~~~v~v~D~~t----------l~~~~ti~~-~~~Gwglt~--dg~-~L~vSdgs~~l~~iDp~t~~~-- 136 (243)
T 3mbr_X 73 WRDRLIQLTWRNHEGFVYDLAT----------LTPRARFRY-PGEGWALTS--DDS-HLYMSDGTAVIRKLDPDTLQQ-- 136 (243)
T ss_dssp ETTEEEEEESSSSEEEEEETTT----------TEEEEEEEC-SSCCCEEEE--CSS-CEEEECSSSEEEEECTTTCCE--
T ss_pred eCCEEEEEEeeCCEEEEEECCc----------CcEEEEEeC-CCCceEEee--CCC-EEEEECCCCeEEEEeCCCCeE--
Confidence 3446777777889999999987 444555553 233456664 455 455556789999999987643
Q ss_pred cccceEeeec--CC---ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-------------CCCee
Q 020480 216 SLEAMQIFKV--HE---GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-------------QSEVG 277 (325)
Q Consensus 216 ~~~~~~~~~~--~~---~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~ 277 (325)
+..+.- +. ..++.+.|. ++ .++|..-.+..|.+.|.++++. +..+... ..-.+
T Consensus 137 ----~~~I~V~~~g~~~~~lNeLe~~-~G-~lyanvw~s~~I~vIDp~tG~V---~~~idl~~l~~~~~~~~~~~~~vlN 207 (243)
T 3mbr_X 137 ----VGSIKVTAGGRPLDNLNELEWV-NG-ELLANVWLTSRIARIDPASGKV---VAWIDLQALVPDADALTDSTNDVLN 207 (243)
T ss_dssp ----EEEEECEETTEECCCEEEEEEE-TT-EEEEEETTTTEEEEECTTTCBE---EEEEECGGGSTTTTSCCCTTSSCEE
T ss_pred ----EEEEEEccCCcccccceeeEEe-CC-EEEEEECCCCeEEEEECCCCCE---EEEEECCcCccccccccCCcCCceE
Confidence 222221 21 245667776 44 5776666788999999999884 4444311 13568
Q ss_pred EEEeCCCCC
Q 020480 278 VSILNASFR 286 (325)
Q Consensus 278 ~i~~~p~~~ 286 (325)
.|+|+|++.
T Consensus 208 GIA~d~~~~ 216 (243)
T 3mbr_X 208 GIAFDAEHD 216 (243)
T ss_dssp EEEEETTTT
T ss_pred EEEEcCCCC
Confidence 999999754
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.90 E-value=0.035 Score=45.51 Aligned_cols=126 Identities=11% Similarity=0.167 Sum_probs=83.3
Q ss_pred CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCC
Q 020480 136 QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNK 215 (325)
Q Consensus 136 ~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~ 215 (325)
.+..++++.-.++.+.+||..+ .+.+.++.. ....+.+++ ++. .|+.+..++.|.++|..+.+.
T Consensus 104 ~g~~Ly~ltw~~~~v~V~D~~T----------l~~~~ti~~-~~eGwGLt~--Dg~-~L~vSdGs~~l~~iDp~T~~v-- 167 (268)
T 3nok_A 104 DGERLYQLTWTEGLLFTWSGMP----------PQRERTTRY-SGEGWGLCY--WNG-KLVRSDGGTMLTFHEPDGFAL-- 167 (268)
T ss_dssp CSSCEEEEESSSCEEEEEETTT----------TEEEEEEEC-SSCCCCEEE--ETT-EEEEECSSSEEEEECTTTCCE--
T ss_pred eCCEEEEEEccCCEEEEEECCc----------CcEEEEEeC-CCceeEEec--CCC-EEEEECCCCEEEEEcCCCCeE--
Confidence 3445777767789999999987 444555553 233355554 455 566666789999999987643
Q ss_pred cccceEeee--cCC---ccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc-------------CCCee
Q 020480 216 SLEAMQIFK--VHE---GVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH-------------QSEVG 277 (325)
Q Consensus 216 ~~~~~~~~~--~~~---~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~ 277 (325)
+..+. .+. ..++.+.|. +| .++|..-.+..|.+.|.++++. +..+... ..-.+
T Consensus 168 ----~~~I~V~~~g~~v~~lNeLe~~-dG-~lyanvw~s~~I~vIDp~TG~V---~~~Idl~~L~~~~~~~~~~~~~vlN 238 (268)
T 3nok_A 168 ----VGAVQVKLRGQPVELINELECA-NG-VIYANIWHSSDVLEIDPATGTV---VGVIDASALTRAVAGQVTNPEAVLN 238 (268)
T ss_dssp ----EEEEECEETTEECCCEEEEEEE-TT-EEEEEETTCSEEEEECTTTCBE---EEEEECHHHHHHHTTTCCCTTCCEE
T ss_pred ----EEEEEeCCCCcccccccccEEe-CC-EEEEEECCCCeEEEEeCCCCcE---EEEEECCCCcccccccccCcCCceE
Confidence 22222 122 245677777 55 5777776788999999999984 4444321 13569
Q ss_pred EEEeCCCCC
Q 020480 278 VSILNASFR 286 (325)
Q Consensus 278 ~i~~~p~~~ 286 (325)
.|||+|++.
T Consensus 239 GIA~dp~~~ 247 (268)
T 3nok_A 239 GIAVEPGSG 247 (268)
T ss_dssp EEEECTTTC
T ss_pred EEEEcCCCC
Confidence 999999754
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.76 E-value=0.15 Score=48.73 Aligned_cols=118 Identities=14% Similarity=0.052 Sum_probs=64.2
Q ss_pred eeEEEecCCCCcEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeC--
Q 020480 128 VNRARYMPQNPFLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSD-- 199 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~-- 199 (325)
...+.|+|++. .|+....+ ..|+++++.+ +.......+. .......++.|+|++..++++...
T Consensus 223 ~~~~~WspDg~-~l~y~~~d~~~~~~~v~~~~lgt--------~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 293 (751)
T 2xe4_A 223 NGEIVWGPDHT-SLFYVTKDETLRENKVWRHVMGK--------LQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPE 293 (751)
T ss_dssp CSCCEECSSTT-EEEEEEECTTCCEEEEEEEETTS--------CGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSS
T ss_pred eeeEEEecCCC-EEEEEEECCCCCCCEEEEEECCC--------CchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCC
Confidence 34678999985 44444443 3677888765 2112223333 233456788999999944444432
Q ss_pred CCcEEEEeCCCCCCCCcccc-eEee-ecCCccEEEEEeecCCCcEEEEEecC--C--cEEEEEccC
Q 020480 200 DAQICLWDINAAPKNKSLEA-MQIF-KVHEGVVEDVAWHLRHEYLFGSVGDD--Q--YLLIWDLRT 259 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~-~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~d--g--~i~iwd~~~ 259 (325)
...|.++|+..+... . +..+ .........+.|+. +..+++....+ + .|..+|+.+
T Consensus 294 ~~~l~~~d~~~~~~~----~~~~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAH----NTLEIVRPREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CEEEEEEESSSCTTC----CCEEESSCCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CceEEEEECCCCCCC----ceeEEeecCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 345788888765211 1 0222 22334455666554 44555555544 3 455556554
No 245
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.73 E-value=0.18 Score=41.17 Aligned_cols=149 Identities=9% Similarity=0.071 Sum_probs=89.7
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
-...+..++|+|++..++++...++.|...|... ..+.++. +-..-.-.|++.+++. ++++.-.++.
T Consensus 25 ~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g-----------~v~~~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~ 92 (255)
T 3qqz_A 25 ITNNISSLTWSAQSNTLFSTINKPAAIVEMTTNG-----------DLIRTIPLDFVKDLETIEYIGDNQ-FVISDERDYA 92 (255)
T ss_dssp CCSCEEEEEEETTTTEEEEEEETTEEEEEEETTC-----------CEEEEEECSSCSSEEEEEECSTTE-EEEEETTTTE
T ss_pred cccCcceeEEeCCCCEEEEEECCCCeEEEEeCCC-----------CEEEEEecCCCCChHHeEEeCCCE-EEEEECCCCc
Confidence 4467999999998767888888888999998864 3344442 2224577889988776 6666667788
Q ss_pred EEEEeCCCCCCCCcccceE-ee--ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee-------cc
Q 020480 203 ICLWDINAAPKNKSLEAMQ-IF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-------AH 272 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~-~~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-------~h 272 (325)
+.++++............. .+ ...+.....++|+|.+..++++.-.+ ...+|.+........+..+. .+
T Consensus 93 l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~-p~~i~~~~g~~~~~~l~i~~~~~~~~~~~ 171 (255)
T 3qqz_A 93 IYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN-PIEVYKVNGLLSSNELHISKDKALQRQFT 171 (255)
T ss_dssp EEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS-SEEEEEEESTTCSSCCEEEECHHHHHTCC
T ss_pred EEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC-CceEEEEcccccCCceeeecchhhccccc
Confidence 9999887553211111111 01 12345678999999876555544444 44555554210000122221 12
Q ss_pred CCCeeEEEeCCCC
Q 020480 273 QSEVGVSILNASF 285 (325)
Q Consensus 273 ~~~v~~i~~~p~~ 285 (325)
...+.+++++|..
T Consensus 172 ~~d~S~l~~dp~t 184 (255)
T 3qqz_A 172 LDDVSGAEFNQQK 184 (255)
T ss_dssp SSCCCEEEEETTT
T ss_pred cCCceeEEEcCCC
Confidence 3457899999854
No 246
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.72 E-value=0.068 Score=47.45 Aligned_cols=150 Identities=7% Similarity=0.026 Sum_probs=87.0
Q ss_pred CeeEEEecC-CCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC-CC---
Q 020480 127 EVNRARYMP-QNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD-DA--- 201 (325)
Q Consensus 127 ~v~~v~~~~-~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~-dg--- 201 (325)
....++++| ++..++++ ...+.|+.+|+.. ..+..+.........++|++++. .|+.+.. ++
T Consensus 138 ~P~~lavdp~~~g~Lyv~-d~~~~I~~id~~~-----------~~v~~~~~~~~~P~~ia~d~~G~-~lyvad~~~~~~~ 204 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLV-GEQHPTRLIDFEK-----------EYVSTVYSGLSKVRTICWTHEAD-SMIITNDQNNNDR 204 (430)
T ss_dssp CCCEEEEETTEEEEEEEE-EBTEEEEEEETTT-----------TEEEEEECCCSCEEEEEECTTSS-EEEEEECCSCTTS
T ss_pred CCCEEEECCCCCCeEEEE-eCCCcEEEEECCC-----------CEEEEEecCCCCcceEEEeCCCC-EEEEEeCCCCccc
Confidence 346788987 34244444 4447888898875 22334444455688999999988 4555443 22
Q ss_pred -cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec--cCCCeeE
Q 020480 202 -QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA--HQSEVGV 278 (325)
Q Consensus 202 -~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~ 278 (325)
.+.+.+.. +.. .....+.. ......++++|++..++++-...+.|..++..... ...+.. .....+.
T Consensus 205 ~~v~~~~~~-g~~----~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~----~~~~~~~~~~~~P~g 274 (430)
T 3tc9_A 205 PNNYILTRE-SGF----KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE----TTPLFTIQDSGWEFH 274 (430)
T ss_dssp EEEEEEEGG-GTS----CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE----EEEEEECSSSSCCEE
T ss_pred ceEEEEeCC-Cce----eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc----EEEEEEcCCCCccee
Confidence 23334433 211 11112221 23456788999444677777788899999987654 212211 1235678
Q ss_pred EEeCCCCC-c--cCCCCceEEeee
Q 020480 279 SILNASFR-L--SHEDTCTCTHRH 299 (325)
Q Consensus 279 i~~~p~~~-~--~~~~d~~~~~~~ 299 (325)
|+|+|+|. + +......+..++
T Consensus 275 ia~~pdG~~lyv~d~~~~~I~~~~ 298 (430)
T 3tc9_A 275 IQFHPSGNYAYIVVVNQHYILRSD 298 (430)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEECCCCEEEEEe
Confidence 99999998 4 333444555543
No 247
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.71 E-value=0.22 Score=41.97 Aligned_cols=149 Identities=9% Similarity=-0.015 Sum_probs=89.2
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
+........++|.+.+..++.+-...+.|..+++..... .......+...-.....+++.+.+..++++-...+
T Consensus 26 ~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~------~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~ 99 (316)
T 1ijq_A 26 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 99 (316)
T ss_dssp ECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTT
T ss_pred hcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCC------CcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCC
Confidence 344456788999987656777767778999999864100 00111122222234578888875554666667788
Q ss_pred cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-CcEEEEEccCCCCCCCeeEe-eccCCCeeEE
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSV-VAHQSEVGVS 279 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i 279 (325)
.|.+.++.... ........-.....++++|.+..++++.... +.|..+++.... ...+ ...-...+.|
T Consensus 100 ~I~~~~~~g~~------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~----~~~~~~~~~~~P~gl 169 (316)
T 1ijq_A 100 TVSVADTKGVK------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTENIQWPNGI 169 (316)
T ss_dssp EEEEEETTSSS------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECSSCSCEEEE
T ss_pred EEEEEeCCCCc------eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC----eEEEEECCCCCceEE
Confidence 99999987531 1112222334678999999765666665443 778888875433 2322 2223457889
Q ss_pred EeCCCCC
Q 020480 280 ILNASFR 286 (325)
Q Consensus 280 ~~~p~~~ 286 (325)
+++|++.
T Consensus 170 a~d~~~~ 176 (316)
T 1ijq_A 170 TLDLLSG 176 (316)
T ss_dssp EEETTTT
T ss_pred EEeccCC
Confidence 9997543
No 248
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.70 E-value=0.25 Score=42.38 Aligned_cols=137 Identities=6% Similarity=-0.072 Sum_probs=86.3
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-CcEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-AQICL 205 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-g~i~i 205 (325)
....+++.+.+.+++.+-...+.|.+.++.. . .....+...-.....++++|.+..++++-... +.|..
T Consensus 117 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG--------~--~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r 186 (349)
T 3v64_C 117 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDG--------A--HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 186 (349)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTS--------C--SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CccEEEEecCCCeEEEEcCCCCeEEEEcCCC--------C--ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEE
Confidence 4567888876656777767778999999875 1 11122223335678999999766456665555 78888
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN 282 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~ 282 (325)
.++..... .......-...+.++++|.+..++++-...+.|..+|+..... ...+.........|++.
T Consensus 187 ~~~dG~~~------~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~---~~~~~~~~~~P~giav~ 254 (349)
T 3v64_C 187 SSMDGSGR------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR---KAVISQGLPHPFAITVF 254 (349)
T ss_dssp EETTSCSC------EESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---EEEECSSCSSEEEEEEE
T ss_pred EeCCCCCc------EEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce---EEEEeCCCCCceEEEEE
Confidence 88875321 1111222345788999987767777777788999999875432 22222223345667764
No 249
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.66 E-value=0.3 Score=42.81 Aligned_cols=150 Identities=9% Similarity=-0.021 Sum_probs=91.0
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
......+..++|.+.+..++.+-...+.|+.+++..... .......+.........+++.+.+..++++-...+
T Consensus 108 ~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~------~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~ 181 (400)
T 3p5b_L 108 IPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLG 181 (400)
T ss_dssp ECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred ccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCC------CCcceEEEeCCCCCcccEEEEecCCceEEEECCCC
Confidence 345567789999987656666666678898888764100 01112222223456778888875554667767788
Q ss_pred cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec-CCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
.|.+.++.... ....+...-.....++++|.+..++.+-.. .+.|...++..... .......-...+.|+
T Consensus 182 ~I~~~~~~g~~------~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~---~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 182 TVSVADTKGVK------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGIT 252 (400)
T ss_dssp EEEEECTTTCS------EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSC---EEEECSSCSCEEEEE
T ss_pred eEEEEeCCCCc------eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCcc---EEEEECCCCceEEEE
Confidence 99999987542 122223233457899999976556555433 47788888875442 222222234678899
Q ss_pred eCCCCC
Q 020480 281 LNASFR 286 (325)
Q Consensus 281 ~~p~~~ 286 (325)
+++.+.
T Consensus 253 vd~~~~ 258 (400)
T 3p5b_L 253 LDLLSG 258 (400)
T ss_dssp EETTTT
T ss_pred EEeCCC
Confidence 997543
No 250
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.66 E-value=0.29 Score=42.63 Aligned_cols=138 Identities=6% Similarity=-0.072 Sum_probs=84.7
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-CcEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-AQICL 205 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-g~i~i 205 (325)
....+++.+.+.+++++-...+.|.+.++.. ......+.........+++.|.+..++++-... +.|..
T Consensus 160 ~p~glavd~~~g~lY~~d~~~~~I~~~~~dg----------~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r 229 (386)
T 3v65_B 160 SPGGLAVDWVHDKLYWTDSGTSRIEVANLDG----------AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEA 229 (386)
T ss_dssp CCCCEEEETTTTEEEEEETTTTEEEECBTTS----------CSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEE
T ss_pred CccEEEEEeCCCeEEEEcCCCCeEEEEeCCC----------CceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEE
Confidence 3456777775546667766677888888764 111222223335678999998776455555455 78888
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
+++..... .......-...+.++++|.+..++++-+..+.|..+|+..... ...+.........|++..
T Consensus 230 ~~~dG~~~------~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~---~~~~~~~~~~P~giav~~ 298 (386)
T 3v65_B 230 SSMDGSGR------RIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR---KAVISQGLPHPFAITVFE 298 (386)
T ss_dssp EETTSCSC------EEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSC---EEEECSSCSSEEEEEEET
T ss_pred EeCCCCCc------EEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCee---EEEEECCCCCceEEEEEC
Confidence 88875321 1111222345788999987767777777888899999875432 222222233456677743
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.64 E-value=0.055 Score=51.23 Aligned_cols=76 Identities=9% Similarity=-0.005 Sum_probs=50.9
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC-CeeE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS-EVGV 278 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~ 278 (325)
+|.|..||+.+++ .+..+..+. .+....+...+ .+++.|+.||.++.||.++++. +..+..... ...-
T Consensus 454 ~g~l~A~D~~tG~------~~W~~~~~~-~~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~---lw~~~~~~~~~~~p 522 (689)
T 1yiq_A 454 SGKLIAWDPVKQQ------AAWEVPYVT-IFNGGTLSTAG-NLVFEGSADGRVIAYAADTGEK---LWEQPAASGVMAAP 522 (689)
T ss_dssp EEEEEEEETTTTE------EEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEECSSCCCSCC
T ss_pred ceeEEEEECCCCC------eEeEccCCC-CccCccceECC-CEEEEECCCCcEEEEECCCCcc---ceeeeCCCCcccCc
Confidence 3779999998874 344444332 23333455555 5788899999999999999984 777654322 2245
Q ss_pred EEeCCCCC
Q 020480 279 SILNASFR 286 (325)
Q Consensus 279 i~~~p~~~ 286 (325)
+.|..+|+
T Consensus 523 ~ty~~~G~ 530 (689)
T 1yiq_A 523 VTYSVDGE 530 (689)
T ss_dssp EEEEETTE
T ss_pred eEEEECCE
Confidence 67778887
No 252
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.60 E-value=0.0075 Score=52.43 Aligned_cols=102 Identities=8% Similarity=-0.197 Sum_probs=67.8
Q ss_pred cEEEEEecCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEe----------CCCcEE
Q 020480 139 FLIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGS----------DDAQIC 204 (325)
Q Consensus 139 ~~la~g~~dg----~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s----------~dg~i~ 204 (325)
..+++-..++ .|.+.|..+ .+.+.++..-..+ .+.++|++.. ++.+. .++.|.
T Consensus 33 ~~yV~~~~~~~~~d~vsvID~~t----------~~v~~~i~vG~~P--~i~~spDg~~-lyVan~~~~r~~~G~~~~~Vs 99 (368)
T 1mda_H 33 RSHITLPAYFAGTTENWVSCAGC----------GVTLGHSLGAFLS--LAVAGHSGSD-FALASTSFARSAKGKRTDYVE 99 (368)
T ss_dssp EEEEEECTTTCSSEEEEEEETTT----------TEEEEEEEECTTC--EEEECTTSSC-EEEEEEEETTTTSSSEEEEEE
T ss_pred eEEEECCccCCccceEEEEECCC----------CeEEEEEeCCCCC--ceEECCCCCE-EEEEcccccccccCCCCCEEE
Confidence 3445544444 888999887 4556666544445 7999999994 55554 478999
Q ss_pred EEeCCCCCCCCcccceEeeecC-------CccEEEEEeecCCCcEEEEEec-CCcEEE--EEccC
Q 020480 205 LWDINAAPKNKSLEAMQIFKVH-------EGVVEDVAWHLRHEYLFGSVGD-DQYLLI--WDLRT 259 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~-------~~~v~~v~~~p~~~~~l~s~~~-dg~i~i--wd~~~ 259 (325)
+||+.+.+ .+..+... ......++++|++..++++... +..+.+ +|+.+
T Consensus 100 viD~~T~~------vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 100 VFDPVTFL------PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EECTTTCC------EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred EEECCCCC------EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 99999873 34444322 1235578999998655544433 467888 88865
No 253
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.58 E-value=0.36 Score=46.34 Aligned_cols=146 Identities=8% Similarity=-0.020 Sum_probs=87.5
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
....+..|+|.+.+..++.+-...+.|+.+++..... .......+.........|++.+.+..++++-...+.|
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~------~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHG------VSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred CCCceEEEeecccCCeeEEeeccceeEEEEeccCCCC------CcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeE
Confidence 3455678888886546666666677888888764100 0011222332334566888887776577777778999
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-CcEEEEEccCCCCCCCeeEe-eccCCCeeEEEe
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSIL 281 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~ 281 (325)
.+.++.... ....+...-.....|+++|.+..++++-... +.|...++.... ...+ ...-...+.|++
T Consensus 496 ~v~~ldG~~------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~----~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 496 SVADTKGVK------RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD----IYSLVTENIQWPNGITL 565 (791)
T ss_dssp EEEETTSSS------EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC----EEEEECSSCSCEEEEEE
T ss_pred EEEeCCCCe------EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc----eEEEEeCCCCCceEEEE
Confidence 999987542 1122223334588999999765566555333 778888886544 2333 222346778888
Q ss_pred CCCC
Q 020480 282 NASF 285 (325)
Q Consensus 282 ~p~~ 285 (325)
++.+
T Consensus 566 D~~~ 569 (791)
T 3m0c_C 566 DLLS 569 (791)
T ss_dssp ETTT
T ss_pred ecCC
Confidence 8543
No 254
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.53 E-value=0.0084 Score=54.98 Aligned_cols=135 Identities=15% Similarity=0.152 Sum_probs=80.4
Q ss_pred eccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCC----CCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEE
Q 020480 122 INHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPS----KPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSG 197 (325)
Q Consensus 122 ~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~----~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~ 197 (325)
+.-.....++.++|+|..+++++..+.+|.++|+.+... +.. ......... .-......++|+|+| ...++.
T Consensus 273 Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~--~~~~v~~~v-~vG~gP~h~aF~~dG-~aY~t~ 348 (595)
T 1fwx_A 273 IPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENAD--PRSAVVAEP-ELGLGPLHTAFDGRG-NAYTSL 348 (595)
T ss_dssp EEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCC--GGGGEEECC-BCCSCEEEEEECTTS-EEEEEE
T ss_pred EecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccC--cccceEEEc-CCCCCcceEEECCCC-eEEEEE
Confidence 333345667899999977788888889999999985100 000 000011112 223457899999999 588889
Q ss_pred eCCCcEEEEeCCCCCC----CCcccceEeeecCCcc-----EEEEEeecCCCcEEEEEe---cCCcE----------EEE
Q 020480 198 SDDAQICLWDINAAPK----NKSLEAMQIFKVHEGV-----VEDVAWHLRHEYLFGSVG---DDQYL----------LIW 255 (325)
Q Consensus 198 s~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~~~-----v~~v~~~p~~~~~l~s~~---~dg~i----------~iw 255 (325)
..|+.|.+||+..... ......+..+..|-.. -..+..+|+|. +|++.. .|+.+ .++
T Consensus 349 ~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk-~l~~~Nk~skdr~~~~gp~~~~~~ql~ 427 (595)
T 1fwx_A 349 FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND-WLVCLSKFSKDRFLNVGPLKPENDQLI 427 (595)
T ss_dssp TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS-EEEEEESCCTTSSCCCCSSCCEEEEEE
T ss_pred ecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC-EEEEcCCCCccccccCCCCCCCcceEE
Confidence 9999999999876210 0001234444444321 12234578885 554443 24332 889
Q ss_pred EccCCC
Q 020480 256 DLRTPS 261 (325)
Q Consensus 256 d~~~~~ 261 (325)
|+...+
T Consensus 428 dis~~~ 433 (595)
T 1fwx_A 428 DISGDK 433 (595)
T ss_dssp ECSSSS
T ss_pred EcCCCc
Confidence 995444
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.44 E-value=0.34 Score=40.83 Aligned_cols=118 Identities=11% Similarity=-0.028 Sum_probs=78.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceEEEEecCCCCCeEEEEeCC-CcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGSDD-AQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~~l~s~s~d-g~i 203 (325)
.....+++.+.+.+++++-...+.|.++++.. .....+ ........++++.|.+..++++.... +.|
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g-----------~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I 145 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-----------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 145 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCC-----------CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeE
Confidence 34578888875546777767788999999865 112222 22335678999999766355554433 688
Q ss_pred EEEeCCCCCCCCcccceEee-ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 204 CLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
...++.... ...+ ...-...+.++++|++..++++-+..+.|..+|+....
T Consensus 146 ~~~~~dG~~-------~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 146 KKGGLNGVD-------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 197 (316)
T ss_dssp EEEETTSCC-------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEcCCCCC-------eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc
Confidence 888876431 2222 12234578899999876777777778899999987543
No 256
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.38 E-value=0.38 Score=40.70 Aligned_cols=141 Identities=8% Similarity=0.016 Sum_probs=87.0
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
.+.++.|.+.+..++.+-...+.|..++... .. .....+...-.....+++.+.+..++++-...+.|.++
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g--------~~-~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~ 106 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNK--------TE-SVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVS 106 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTS--------SS-CCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccC--------CC-ceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEE
Confidence 4668899986656777767778999999876 11 11122222223456788887555466676677899999
Q ss_pred eCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe-cCCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeCCC
Q 020480 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILNAS 284 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~p~ 284 (325)
++..... .............++++|.+..++.+-. ..+.|...++.... ...+ ...-...+.|+|+|+
T Consensus 107 ~~dG~~~------~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~----~~~~~~~~l~~Pnglavd~~ 176 (318)
T 3sov_A 107 NLDGSLR------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS----RFIIINSEIYWPNGLTLDYE 176 (318)
T ss_dssp ETTSCSC------EEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS----CEEEECSSCSCEEEEEEETT
T ss_pred ECCCCcE------EEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC----eEEEEECCCCCccEEEEecc
Confidence 9875421 1112233456788999987555555542 35778888876543 2222 222345688999984
Q ss_pred CC
Q 020480 285 FR 286 (325)
Q Consensus 285 ~~ 286 (325)
+.
T Consensus 177 ~~ 178 (318)
T 3sov_A 177 EQ 178 (318)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 257
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.33 E-value=0.13 Score=49.15 Aligned_cols=141 Identities=12% Similarity=0.103 Sum_probs=77.6
Q ss_pred CeeEEEec-CCCCcEEEEE-ecCC----eEEEEeCCCCCCCCCCCC-CCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 127 EVNRARYM-PQNPFLIATK-TVSA----EVYVFDYSKHPSKPPLDG-ACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 127 ~v~~v~~~-~~~~~~la~g-~~dg----~v~vwd~~~~~~~~~~~~-~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
.+...+|+ |+| ++||.+ ..+| .|+++|+.+ + ...+. .+.. ...++.|+|++.. |+....
T Consensus 175 ~~~~~~~S~PDG-~~lAy~~~~~G~~~~~l~v~dl~~--------g~~~l~~-~~~~---~~~~~~WspDg~~-l~y~~~ 240 (751)
T 2xe4_A 175 DVMEVKPAPPEH-DLVAFSVDMSGNEVYTIEFKRISD--------PSQTIAD-KVSG---TNGEIVWGPDHTS-LFYVTK 240 (751)
T ss_dssp EEEEEEECTTTT-CEEEEEEESSSSSCEEEEEEETTC--------TTCCCCC-CEEE---ECSCCEECSSTTE-EEEEEE
T ss_pred EEeeeEecCCCC-CEEEEEEeCCCCceEEEEEEECCC--------CCEeCCc-cccC---ceeeEEEecCCCE-EEEEEE
Confidence 57788999 999 556543 3333 599999987 2 21111 1111 1346889999984 444444
Q ss_pred C-----CcEEEEeCCCCCCCCcccceEeee-cCCccEEEEEeecCCCcEEEEEec--CCcEEEEEccCCCCCCC-eeEe-
Q 020480 200 D-----AQICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGD--DQYLLIWDLRTPSVSKP-VQSV- 269 (325)
Q Consensus 200 d-----g~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~- 269 (325)
+ ..|.++++.++.. .....+. ........+.|+|++..++++... ...|.++|+.++.. .. +..+
T Consensus 241 d~~~~~~~v~~~~lgt~~~----~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-~~~~~~l~ 315 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQS----EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-HNTLEIVR 315 (751)
T ss_dssp CTTCCEEEEEEEETTSCGG----GCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-CCCEEESS
T ss_pred CCCCCCCEEEEEECCCCch----hcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-CceeEEee
Confidence 3 2577788766431 1122222 222345678999998655544433 34577888876531 01 0222
Q ss_pred eccCCCeeEEEeCCCCC
Q 020480 270 VAHQSEVGVSILNASFR 286 (325)
Q Consensus 270 ~~h~~~v~~i~~~p~~~ 286 (325)
........++.|+..+.
T Consensus 316 ~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 316 PREKGVRYDVQMHGTSH 332 (751)
T ss_dssp CCCTTCCEEEEEETTTE
T ss_pred cCCCCceEEEeeeeCCE
Confidence 23344555565544443
No 258
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.30 E-value=0.2 Score=42.20 Aligned_cols=138 Identities=10% Similarity=-0.034 Sum_probs=78.7
Q ss_pred CeeEEEecC-CCCcEEEEEec-----------------CCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecC
Q 020480 127 EVNRARYMP-QNPFLIATKTV-----------------SAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSK 188 (325)
Q Consensus 127 ~v~~v~~~~-~~~~~la~g~~-----------------dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p 188 (325)
..+.+++.+ +| +++++-.. +|.|..++... +. ...+.........++|+|
T Consensus 127 ~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~--------~~---~~~~~~~~~~p~gia~~~ 194 (322)
T 2fp8_A 127 WLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPST--------KE---TTLLLKELHVPGGAEVSA 194 (322)
T ss_dssp CEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTT--------TE---EEEEEEEESCCCEEEECT
T ss_pred ccceEEEecCCC-EEEEECCcccccccccceehcccCCCceEEEEeCCC--------CE---EEEeccCCccCcceEECC
Confidence 467788888 77 55555322 36788888654 11 111211112346799999
Q ss_pred CCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec----------CCcEEEEEcc
Q 020480 189 FKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD----------DQYLLIWDLR 258 (325)
Q Consensus 189 ~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~----------dg~i~iwd~~ 258 (325)
++..++++-+..+.|.+|++...... ....+....+ ...+++.++| +++++... .+.|..+|..
T Consensus 195 dg~~lyv~d~~~~~I~~~~~~~~~~~----~~~~~~~~~g-P~gi~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 195 DSSFVLVAEFLSHQIVKYWLEGPKKG----TAEVLVKIPN-PGNIKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp TSSEEEEEEGGGTEEEEEESSSTTTT----CEEEEEECSS-EEEEEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcCC----ccceEEeCCC-CCCeEECCCC-CEEEEecCcccccccCCCccEEEEECCC
Confidence 98744555566789999998753211 1112211223 6788999987 56666544 4667777764
Q ss_pred CCCCCCCeeEeecc----CCCeeEEEeCCCCCc
Q 020480 259 TPSVSKPVQSVVAH----QSEVGVSILNASFRL 287 (325)
Q Consensus 259 ~~~~~~~~~~~~~h----~~~v~~i~~~p~~~~ 287 (325)
++ .+..+... -..+.++++ .++.+
T Consensus 269 -G~---~~~~~~~~~g~~~~~~~~~~~-~~g~L 296 (322)
T 2fp8_A 269 -GN---ILEVIPLPPPFAGEHFEQIQE-HDGLL 296 (322)
T ss_dssp -SC---EEEEEECCTTTTTSCCCEEEE-ETTEE
T ss_pred -CC---EEEEEECCCCCccccceEEEE-eCCEE
Confidence 33 24444322 134566666 34554
No 259
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.29 E-value=0.21 Score=42.28 Aligned_cols=158 Identities=8% Similarity=-0.015 Sum_probs=92.6
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CC--CceEEEEe---cCCCCCeEE
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HS--TEGYGLSW---SKFKEGHLL 195 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----h~--~~v~~l~~---~p~~~~~l~ 195 (325)
...-.+++|.+.+..++++.-..|.|..|+... +....+ .+.+ .. ..+..|.| .|.+. +++
T Consensus 12 ~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~--------~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~v 81 (334)
T 2p9w_A 12 NLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKT--------QSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFA 81 (334)
T ss_dssp TCCCSCEEEETTTTEEEEEETTTTEEEEECTTT--------CCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEE
T ss_pred ccCCcCccCcCCCCEEEEEeccCCEEEEEcCCC--------CeEEEE-ecCCccccCCCcceeeEEEEeccCCCCc-EEE
Confidence 334457789886645666655799999999864 111111 1221 11 13579999 68765 666
Q ss_pred EEe-------------CCCcEEEEeCC---CCCCCCcccceEeeec-----------CCccEEEEEeecCCCcEEEEEec
Q 020480 196 SGS-------------DDAQICLWDIN---AAPKNKSLEAMQIFKV-----------HEGVVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 196 s~s-------------~dg~i~iwd~~---~~~~~~~~~~~~~~~~-----------~~~~v~~v~~~p~~~~~l~s~~~ 248 (325)
+.. .+..+..+|+. +++..+. ..+.. -....+.++..++| +..++++.
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~----~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~ 156 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWS----VNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFAL 156 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEE----EESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEE
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEE----ecCccccccccccccccccCCceeEECCCC-CEEEeCCC
Confidence 443 26789999998 5543211 11111 11358899999987 68888887
Q ss_pred C-CcEEEEEccCCCCCCCeeEee------ccCCCeeEEEeCCCCCc--cCCCCceEEeeecc
Q 020480 249 D-QYLLIWDLRTPSVSKPVQSVV------AHQSEVGVSILNASFRL--SHEDTCTCTHRHSR 301 (325)
Q Consensus 249 d-g~i~iwd~~~~~~~~~~~~~~------~h~~~v~~i~~~p~~~~--~~~~d~~~~~~~~~ 301 (325)
. +.|...+..... +..+. ......+.|+++|+|.+ .....+.+.-.++.
T Consensus 157 ~~~~I~rV~pdG~~----~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 157 GMPAIARVSADGKT----VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp SSCEEEEECTTSCC----EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred CCCeEEEEeCCCCE----EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 7 776666655432 22221 11223679999999974 22124444444443
No 260
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.19 E-value=0.59 Score=41.04 Aligned_cols=126 Identities=11% Similarity=0.106 Sum_probs=79.9
Q ss_pred cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC----CCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCc-----
Q 020480 146 VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH----STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS----- 216 (325)
Q Consensus 146 ~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~----- 216 (325)
.++.||.-++.. . ...+.+..- -..+..+..+|.|. +|+.. .+..|.|-.+-.+.....
T Consensus 39 ~~n~iR~~~i~~--------~--~~Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 39 QDNIIRWYNVLT--------D--SLYHSLNFSRHLVLDDTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp ETTEEEEEETTT--------C--SSCEEEECTTTCCCCTTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHH
T ss_pred ECCEEEEEECCC--------C--CcceEEecCcccccCceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCcccccc
Confidence 457899888874 1 123333321 23578899999998 56655 467899998874322110
Q ss_pred -ccceEeeec------CCccEEEEEeecCCC--cEEEEEecCCcEEEEEccCCCCCCCeeEee---------ccCCCeeE
Q 020480 217 -LEAMQIFKV------HEGVVEDVAWHLRHE--YLFGSVGDDQYLLIWDLRTPSVSKPVQSVV---------AHQSEVGV 278 (325)
Q Consensus 217 -~~~~~~~~~------~~~~v~~v~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---------~h~~~v~~ 278 (325)
....+.+.- ....|..+.|||.+. ..|++-..|+.||+||+.... ..|. .+. .....|.+
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~-~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ-EKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT-SCCE-EESCCCSEEESCSSCCCEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC-CCCc-chhccccccCCCcccceEEE
Confidence 001122222 246799999999654 388899999999999999733 2244 332 12256788
Q ss_pred EEeCCCC
Q 020480 279 SILNASF 285 (325)
Q Consensus 279 i~~~p~~ 285 (325)
++|.+++
T Consensus 185 ~~Fg~~~ 191 (452)
T 3pbp_A 185 LEFSKDG 191 (452)
T ss_dssp EEECTTS
T ss_pred EEEcCCC
Confidence 8998854
No 261
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.18 E-value=0.064 Score=50.69 Aligned_cols=54 Identities=20% Similarity=0.163 Sum_probs=35.0
Q ss_pred CcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCC--ccCCCCceEEeeecce--eeecc
Q 020480 250 QYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFR--LSHEDTCTCTHRHSRY--LLYKF 307 (325)
Q Consensus 250 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~--~~~~~d~~~~~~~~~~--~~~~~ 307 (325)
|.|..||+.+++. +..+. +..++....+...+. +.++.|+.++.++.+. .+|.+
T Consensus 457 g~l~A~D~~tG~~---~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~ 514 (677)
T 1kb0_A 457 GRLLAWDPVAQKA---AWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (677)
T ss_dssp EEEEEEETTTTEE---EEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEeCCCCcE---EeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeee
Confidence 7899999999883 55554 444555545554443 3677889999988643 34444
No 262
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.12 E-value=0.16 Score=44.59 Aligned_cols=126 Identities=8% Similarity=0.012 Sum_probs=76.4
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCC--CCCCcEEEec------CCCceEEEEecCCCCC--eEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDG--ACSPDLRLRG------HSTEGYGLSWSKFKEG--HLLS 196 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~--~~~~~~~~~~------h~~~v~~l~~~p~~~~--~l~s 196 (325)
.|..+..+|+| ++||..+ +..|.|-.++.........+ .....+.+.- ...+|..+.|+|-+.. .|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 67889999999 6888865 55899999884211110000 0001122321 2578999999997643 7999
Q ss_pred EeCCCcEEEEeCCCCCCCCc-cc---ceEeeecCCccEEEEEeecCCCcEEEE--EecCCcEEEE
Q 020480 197 GSDDAQICLWDINAAPKNKS-LE---AMQIFKVHEGVVEDVAWHLRHEYLFGS--VGDDQYLLIW 255 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~-~~---~~~~~~~~~~~v~~v~~~p~~~~~l~s--~~~dg~i~iw 255 (325)
-..|+.|++||+........ +. ....+......|.+++|..++- .|.. .+..|.|+-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGL-TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSS-CEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCc-EEEEEecCCCCCEEEE
Confidence 99999999999987432111 00 0001112235688899988653 3434 3366777654
No 263
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.09 E-value=0.83 Score=42.63 Aligned_cols=141 Identities=6% Similarity=-0.013 Sum_probs=88.4
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..+..++|.+.+..++.+-..++.|+.+++.. . .....+.........+++.+.+..++++-...+.|.+
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g--------~--~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v 106 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNG--------S--ALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEV 106 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS--------C--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCC--------C--CcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEE
Confidence 46778999997767777777788999998875 1 1122222222345678877666646676667789999
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEE-ecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSV-GDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNAS 284 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~ 284 (325)
.++..... .......-.....++++|....++.+- +..+.|...++.... ...+...-...+.|++++.
T Consensus 107 ~~~dG~~~------~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~----~~~l~~~~~~P~GlalD~~ 176 (628)
T 4a0p_A 107 SKLDGQHR------QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSE----RTTLVPNVGRANGLTIDYA 176 (628)
T ss_dssp EETTSTTC------EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS----CEEEECSCSSEEEEEEETT
T ss_pred EecCCCcE------EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCc----eEEEECCCCCcceEEEccc
Confidence 99875421 111223334578999999654555554 235677777776554 2333233456788999885
Q ss_pred CC
Q 020480 285 FR 286 (325)
Q Consensus 285 ~~ 286 (325)
+.
T Consensus 177 ~~ 178 (628)
T 4a0p_A 177 KR 178 (628)
T ss_dssp TT
T ss_pred cC
Confidence 43
No 264
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.03 E-value=0.036 Score=48.14 Aligned_cols=89 Identities=8% Similarity=-0.080 Sum_probs=61.3
Q ss_pred EEecCCCCCeEEEEe---C-----CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe-cCCcEEE
Q 020480 184 LSWSKFKEGHLLSGS---D-----DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DDQYLLI 254 (325)
Q Consensus 184 l~~~p~~~~~l~s~s---~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~-~dg~i~i 254 (325)
+.++|++..++++.. . ++.+.++|+.+.+ .+..+... .....++|+|++..++++.. .++.|.+
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~------vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsV 341 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQ------TSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDI 341 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCC------EEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEE
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCe------EEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEE
Confidence 678999884444433 2 2356699998874 34443322 25889999999876888888 6999999
Q ss_pred EEccCCCCCCCeeEeeccCCCeeEEEeCC
Q 020480 255 WDLRTPSVSKPVQSVVAHQSEVGVSILNA 283 (325)
Q Consensus 255 wd~~~~~~~~~~~~~~~h~~~v~~i~~~p 283 (325)
+|+.+.+. +.++... .....+++.+
T Consensus 342 ID~~t~kv---v~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 342 YDAASDQD---QSSVELD-KGPESLSVQN 366 (368)
T ss_dssp EESSSCEE---EEECCCC-SCCCEEECCC
T ss_pred EECCCCcE---EEEEECC-CCCCEEEeec
Confidence 99999884 6666533 3445666654
No 265
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.02 E-value=0.49 Score=38.59 Aligned_cols=151 Identities=11% Similarity=0.135 Sum_probs=87.6
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe------cCCCceEEEEecCCCCCeEEEEeC
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR------GHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
.....|++.+++ .++++.-.++.+.++++.... ....+.... ........|+|+|.+. .|+++..
T Consensus 70 ~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~~-------~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~-~L~va~E 140 (255)
T 3qqz_A 70 KDLETIEYIGDN-QFVISDERDYAIYVISLTPNS-------EVKILKKIKIPLQESPTNCGFEGLAYSRQDH-TFWFFKE 140 (255)
T ss_dssp SSEEEEEECSTT-EEEEEETTTTEEEEEEECTTC-------CEEEEEEEECCCSSCCCSSCCEEEEEETTTT-EEEEEEE
T ss_pred CChHHeEEeCCC-EEEEEECCCCcEEEEEcCCCC-------eeeeeeeeccccccccccCCcceEEEeCCCC-EEEEEEC
Confidence 567788888877 555555567789999876521 000111111 2334568999999987 4555554
Q ss_pred CCcEEEEeCCCCCCCCcccceEe--e--ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee-cc--
Q 020480 200 DAQICLWDINAAPKNKSLEAMQI--F--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AH-- 272 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~--~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~h-- 272 (325)
.....+|.++.......+..... + ..+...+.+++++|...++++.......|..+|....-. ....+. +.
T Consensus 141 ~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~--~~~~L~~g~~~ 218 (255)
T 3qqz_A 141 KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVI--GEMSLTKGSRG 218 (255)
T ss_dssp SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCCEE--EEEECSTTGGG
T ss_pred cCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCCEE--EEEEcCCccCC
Confidence 44455555542111111111100 0 112345789999998777888888889999999764421 122222 11
Q ss_pred ----CCCeeEEEeCCCCCc
Q 020480 273 ----QSEVGVSILNASFRL 287 (325)
Q Consensus 273 ----~~~v~~i~~~p~~~~ 287 (325)
-...-.|+|.++|.+
T Consensus 219 l~~~~~qpEGia~d~~G~l 237 (255)
T 3qqz_A 219 LSHNIKQAEGVAMDASGNI 237 (255)
T ss_dssp CSSCCCSEEEEEECTTCCE
T ss_pred cccccCCCCeeEECCCCCE
Confidence 125578999999986
No 266
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.97 E-value=0.33 Score=43.73 Aligned_cols=146 Identities=11% Similarity=0.059 Sum_probs=85.0
Q ss_pred eeEEEecCC-CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC----CCceEEEEe-------cCCCCCeEE
Q 020480 128 VNRARYMPQ-NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH----STEGYGLSW-------SKFKEGHLL 195 (325)
Q Consensus 128 v~~v~~~~~-~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~-------~p~~~~~l~ 195 (325)
...|+|.|. +.+++++-...+.|++.|+.. ..+..+..- ......++| ++++. .|+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~-----------~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~-~ly 208 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKN-----------RMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAE-YMI 208 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTT-----------TEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTC-EEE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCC-----------CEEEEEEccCccccCCCcEEEEeecccccCCCCC-EEE
Confidence 457899984 435666655557788888876 223333221 235789999 99988 455
Q ss_pred EEeCCC-c------EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEcc-------CCC
Q 020480 196 SGSDDA-Q------ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR-------TPS 261 (325)
Q Consensus 196 s~s~dg-~------i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~-------~~~ 261 (325)
.+...+ . |.+.+...............+.. -.....++.+|++..++++-...+.|..+|+. ++.
T Consensus 209 vad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~ 287 (496)
T 3kya_A 209 VAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGG 287 (496)
T ss_dssp EEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTC
T ss_pred EEeCCCCCcccCceEEEEecCCCCceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCce
Confidence 554443 2 66666333111100000011111 12345678899666788888889999999998 554
Q ss_pred CCCC--------eeEe--eccCCCeeEEEeCCCCC
Q 020480 262 VSKP--------VQSV--VAHQSEVGVSILNASFR 286 (325)
Q Consensus 262 ~~~~--------~~~~--~~h~~~v~~i~~~p~~~ 286 (325)
...+ ...+ .+.......|+|+|+|.
T Consensus 288 ~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 288 SWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK 322 (496)
T ss_dssp CCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred eecccccccccccceeEecCCCCCceEEEEcCCCC
Confidence 2111 1121 11234467899999998
No 267
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.82 E-value=0.25 Score=42.55 Aligned_cols=107 Identities=13% Similarity=0.010 Sum_probs=64.2
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC---------CCce-EEEEecCCCCCeEEEEeCCCcEEEEeC
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH---------STEG-YGLSWSKFKEGHLLSGSDDAQICLWDI 208 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h---------~~~v-~~l~~~p~~~~~l~s~s~dg~i~iwd~ 208 (325)
..+.+++.++.|..+|..+ + +.+...... ...+ ..... .+. .++.++.++.|..+|.
T Consensus 54 ~~v~~~~~~g~v~a~d~~t--------G--~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~v~v~~~~g~l~a~d~ 120 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADD--------G--KEIWSVSLAEKDGWFSKEPALLSGGVTV--SGG-HVYIGSEKAQVYALNT 120 (376)
T ss_dssp TEEEEECTTSEEEEEETTT--------C--CEEEEEECCC---CCSCCCCCEEEEEEE--ETT-EEEEEETTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEEccC--------C--ceeeeecCccccccccccCcccccCceE--eCC-EEEEEcCCCEEEEEEC
Confidence 3667777888999999876 2 223333321 1122 22222 233 6888899999999999
Q ss_pred CCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee
Q 020480 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV 270 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 270 (325)
.+++. +................ + ..++.++.++.|..+|.++++. +....
T Consensus 121 ~tG~~------~W~~~~~~~~~~~p~~~--~-~~v~v~~~~g~l~~~d~~tG~~---~W~~~ 170 (376)
T 3q7m_A 121 SDGTV------AWQTKVAGEALSRPVVS--D-GLVLIHTSNGQLQALNEADGAV---KWTVN 170 (376)
T ss_dssp TTCCE------EEEEECSSCCCSCCEEE--T-TEEEEECTTSEEEEEETTTCCE---EEEEE
T ss_pred CCCCE------EEEEeCCCceEcCCEEE--C-CEEEEEcCCCeEEEEECCCCcE---EEEEe
Confidence 98743 33333222111111222 2 3677888999999999998873 55443
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.78 E-value=0.75 Score=38.81 Aligned_cols=138 Identities=9% Similarity=-0.053 Sum_probs=85.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceEEEEecCCCCCeEEEEe-CCCcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGS-DDAQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~~l~s~s-~dg~i 203 (325)
.....+++.+.+.+++.+-...+.|.++++.. .....+ .........+++.|.+..++.+-. ..+.|
T Consensus 79 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG-----------~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I 147 (318)
T 3sov_A 79 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDG-----------SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKI 147 (318)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----------CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEE
T ss_pred CCccEEEEEcCCCeEEEEECCCCEEEEEECCC-----------CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEE
Confidence 34567888876556777766778999999875 112222 233456789999987663444432 35788
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILN 282 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~ 282 (325)
...++..... .......-...+.++++|++..++.+=+..+.|..+|+.... ...+ .........+++.
T Consensus 148 ~r~~~dG~~~------~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~----~~~~~~~~~~~P~glav~ 217 (318)
T 3sov_A 148 ERAGMDGSSR------FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN----RQAVVKGSLPHPFALTLF 217 (318)
T ss_dssp EEEETTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECSCCSCEEEEEEE
T ss_pred EEEEcCCCCe------EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc----eEEEecCCCCCceEEEEe
Confidence 8888764321 111122234568899999776777777788899999987543 2222 2223345566665
Q ss_pred CC
Q 020480 283 AS 284 (325)
Q Consensus 283 p~ 284 (325)
.+
T Consensus 218 ~~ 219 (318)
T 3sov_A 218 ED 219 (318)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.75 E-value=0.68 Score=39.15 Aligned_cols=153 Identities=12% Similarity=0.047 Sum_probs=83.2
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEE-EeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYV-FDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~v-wd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
.....+..+.+.+++ .+++++. .|.+.. .|-.. ....++ -......+..+.+.+++. ++.++.+|
T Consensus 160 ~~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG--------~tW~~~--~~~~~~~~~~~~~~~~g~--~~~~~~~G 225 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQ--------TAWEPH--NRTTSRRLHNMGFTPDGR--LWMIVNGG 225 (327)
T ss_dssp SCCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTC--------SSCEEE--ECCSSSCEEEEEECTTSC--EEEEETTT
T ss_pred CCCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCC--------CceeEC--CCCCCCccceeEECCCCC--EEEEeCCc
Confidence 345678889999877 5666654 454443 33211 112221 123456788999988876 44556678
Q ss_pred cEEEEeCCCCCCCCcccceEee-ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee---ccCCCee
Q 020480 202 QICLWDINAAPKNKSLEAMQIF-KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV---AHQSEVG 277 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~-~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~ 277 (325)
.+++.+...+.. + ..+..- ..+...+.++.+.+.+ .++++ +.+|.| ++....++. -..+. .....+.
T Consensus 226 ~~~~s~~D~G~t-W--~~~~~~~~~~~~~~~~v~~~~~~-~~~~~-g~~g~i-~~S~DgG~t---W~~~~~~~~~~~~~~ 296 (327)
T 2xbg_A 226 KIAFSDPDNSEN-W--GELLSPLRRNSVGFLDLAYRTPN-EVWLA-GGAGAL-LCSQDGGQT---WQQDVDVKKVPSNFY 296 (327)
T ss_dssp EEEEEETTEEEE-E--CCCBCTTSSCCSCEEEEEESSSS-CEEEE-ESTTCE-EEESSTTSS---CEECGGGTTSSSCCC
T ss_pred eEEEecCCCCCe-e--EeccCCcccCCcceEEEEecCCC-EEEEE-eCCCeE-EEeCCCCcc---cEEcCccCCCCCCeE
Confidence 887774221210 0 001000 0122358889898765 45554 446766 344444543 22222 2345688
Q ss_pred EEEeCCCCCc-cCCCCceEEee
Q 020480 278 VSILNASFRL-SHEDTCTCTHR 298 (325)
Q Consensus 278 ~i~~~p~~~~-~~~~d~~~~~~ 298 (325)
++.|.+++.+ .++.++.+.-.
T Consensus 297 ~v~~~~~~~~~~~G~~G~i~~~ 318 (327)
T 2xbg_A 297 KILFFSPDQGFILGQKGILLRY 318 (327)
T ss_dssp EEEEEETTEEEEECSTTEEEEE
T ss_pred EEEEECCCceEEEcCCceEEEE
Confidence 8999766654 66677755543
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.72 E-value=1 Score=43.21 Aligned_cols=141 Identities=12% Similarity=0.020 Sum_probs=91.1
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-------CCCceEEEEecCCCCCeEEEEe
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-------HSTEGYGLSWSKFKEGHLLSGS 198 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~~p~~~~~l~s~s 198 (325)
..|.++...++|. |-.|+.++-|..|+.... ....+.. ....|.++...+++. |-.|+
T Consensus 310 ~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~-----------~~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt 374 (795)
T 4a2l_A 310 RSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRN-----------RFKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGT 374 (795)
T ss_dssp SCEEEEEECTTSC--EEEEESSSCEEEECGGGG-----------SSEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEE
T ss_pred CcEEEEEEeCCcC--EEEEECCCCeEEeCCCcc-----------cceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEE
Confidence 4688888888773 455667677888876541 1111111 234689999888776 55677
Q ss_pred CCCcEEEEeCCCCCCCCcccceEeee---------cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 199 DDAQICLWDINAAPKNKSLEAMQIFK---------VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 199 ~dg~i~iwd~~~~~~~~~~~~~~~~~---------~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
.++-|..||..++. ...+. -....|.+++..+++ .+|..|+.++-|..||..+++ +..+
T Consensus 375 ~~~Gl~~~~~~~~~-------~~~~~~~~~~~~~~l~~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~----~~~~ 442 (795)
T 4a2l_A 375 NDGGLNLYNPITQR-------FTSYTLQEDESARGIGSNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQ----VENF 442 (795)
T ss_dssp SSSCEEEECTTTCC-------EEEECCC------CCSCSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCC----EEEE
T ss_pred CCCCeEEEcCCCCc-------EEEEecCCCCcccCCCCccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCc----EEEe
Confidence 77789999987642 11111 123568899888776 535567777789999988765 3333
Q ss_pred e-----ccCCCeeEEEeCCCCCc-cCCCCc
Q 020480 270 V-----AHQSEVGVSILNASFRL-SHEDTC 293 (325)
Q Consensus 270 ~-----~h~~~v~~i~~~p~~~~-~~~~d~ 293 (325)
. .....|.++...++|.+ .+...+
T Consensus 443 ~~~~~~l~~~~v~~i~~d~~g~lwigt~~G 472 (795)
T 4a2l_A 443 NQRNSQLVNENVYAILPDGEGNLWLGTLSA 472 (795)
T ss_dssp CTTTSCCSCSCEEEEEECSSSCEEEEESSC
T ss_pred ecCCCCcCCCeeEEEEECCCCCEEEEecCc
Confidence 2 12457899999988886 443333
No 271
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.70 E-value=0.23 Score=42.75 Aligned_cols=132 Identities=7% Similarity=-0.005 Sum_probs=76.6
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCccc
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLE 218 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 218 (325)
..+.+++.++.+..+|..+ + +.+.... ......+... +. .++.++.++.+..+|..+++.
T Consensus 240 ~~v~~~~~~g~l~~~d~~t--------G--~~~w~~~--~~~~~~~~~~--~~-~l~~~~~~g~l~~~d~~tG~~----- 299 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRS--------G--QIMWKRE--LGSVNDFIVD--GN-RIYLVDQNDRVMALTIDGGVT----- 299 (376)
T ss_dssp TEEEEECTTSCEEEEETTT--------C--CEEEEEC--CCCEEEEEEE--TT-EEEEEETTCCEEEEETTTCCE-----
T ss_pred CEEEEEecCcEEEEEECCC--------C--cEEeecc--CCCCCCceEE--CC-EEEEEcCCCeEEEEECCCCcE-----
Confidence 3566777889999999876 2 2233332 2233444443 34 688888899999999988743
Q ss_pred ceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeE-EEeCCCCCc-cCCCCceE
Q 020480 219 AMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGV-SILNASFRL-SHEDTCTC 295 (325)
Q Consensus 219 ~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-i~~~p~~~~-~~~~d~~~ 295 (325)
+..... ....+...... + ..++.++.+|.|+++|.++++. +.........+.+ .... ++.+ .++.++.+
T Consensus 300 -~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~tG~~---~~~~~~~~~~~~~~~~~~-~~~l~v~~~~G~l 371 (376)
T 3q7m_A 300 -LWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVEDGRF---VAQQKVDSSGFQTEPVAA-DGKLLIQAKDGTV 371 (376)
T ss_dssp -EEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCCE---EEEEECCTTCBCSCCEEE-TTEEEEEBTTSCE
T ss_pred -EEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCCCcE---EEEEecCCCcceeCCEEE-CCEEEEEeCCCEE
Confidence 333321 11122222222 3 4677888999999999999873 5555432333322 2222 3443 55556665
Q ss_pred Eee
Q 020480 296 THR 298 (325)
Q Consensus 296 ~~~ 298 (325)
..+
T Consensus 372 ~~~ 374 (376)
T 3q7m_A 372 YSI 374 (376)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 272
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.47 E-value=1.2 Score=38.95 Aligned_cols=120 Identities=10% Similarity=-0.034 Sum_probs=78.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC-CCcEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD-DAQIC 204 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~-dg~i~ 204 (325)
.....+++.+.+.+++++-...+.|.+.++.. ......+.........|++.|.+..++.+-.. .+.|.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g----------~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~ 228 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG----------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIK 228 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTT----------CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEE
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCC----------CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEE
Confidence 45667888875546777767778899888875 11112222334457899999976634444323 37888
Q ss_pred EEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
..++..... .......-...+.|+++|.+..++++-...+.|..+|+....
T Consensus 229 ~~~~dG~~~------~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 229 KGGLNGVDI------YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 279 (400)
T ss_dssp EEETTSCSC------EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCC
T ss_pred EEeCCCCcc------EEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCc
Confidence 888875421 111222234678899998776677776778899999987654
No 273
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.38 E-value=0.055 Score=51.30 Aligned_cols=145 Identities=8% Similarity=-0.015 Sum_probs=79.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICL 205 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~i 205 (325)
..+..++|.+.+..++++-...+.|+.+++...... ......+.........|++.+.+..++++-...+.|.+
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~------~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v 479 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV------SSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSV 479 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-------CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEE
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCC------cceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEE
Confidence 456678888866455555556678888887641000 01111111111234567887655546666667789999
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-CcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-QYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNAS 284 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~ 284 (325)
+++..... ...+.........++++|.+..++++-... +.|..+++..... ...+...-...+.|+|+|+
T Consensus 480 ~d~dg~~~------~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~---~~l~~~~l~~PnGlavd~~ 550 (699)
T 1n7d_A 480 ADTKGVKR------KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI---YSLVTENIQWPNGITLDLL 550 (699)
T ss_dssp EBSSSCCE------EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC---CEESCSSCSSCCCEEECTT
T ss_pred EecCCCce------EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe---eEEEeCCCCCccEEEEecc
Confidence 99875421 111222223457788998665555554333 6787777754331 1111112234567888875
Q ss_pred C
Q 020480 285 F 285 (325)
Q Consensus 285 ~ 285 (325)
+
T Consensus 551 ~ 551 (699)
T 1n7d_A 551 S 551 (699)
T ss_dssp T
T ss_pred C
Confidence 4
No 274
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.13 E-value=2.1 Score=41.07 Aligned_cols=140 Identities=9% Similarity=-0.006 Sum_probs=88.6
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---------cCCCceEEEEecCCCCCeEEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---------GHSTEGYGLSWSKFKEGHLLS 196 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~~p~~~~~l~s 196 (325)
..|.++...++| + |-.|+.++-|..|+... +. ...+. -....|.++...+++. +|..
T Consensus 357 ~~V~~i~~d~~g-~-lWiGt~~~Gl~~~~~~~--------~~---~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWi 422 (795)
T 4a2l_A 357 NVVSCIVEDKDK-N-LWIGTNDGGLNLYNPIT--------QR---FTSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYI 422 (795)
T ss_dssp SSEEEEEECTTS-C-EEEEESSSCEEEECTTT--------CC---EEEECCC------CCSCSCEEEEEEETTTT-EEEE
T ss_pred CeeEEEEECCCC-C-EEEEECCCCeEEEcCCC--------Cc---EEEEecCCCCcccCCCCccEEEEEEcCCCC-EEEE
Confidence 458888888777 3 44567776788888765 11 11221 1135688998887765 4777
Q ss_pred EeCCCcEEEEeCCCCCCCCcccceEeee-----cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec
Q 020480 197 GSDDAQICLWDINAAPKNKSLEAMQIFK-----VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA 271 (325)
Q Consensus 197 ~s~dg~i~iwd~~~~~~~~~~~~~~~~~-----~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 271 (325)
|+.++-|.+||.+++. ...+. .....|.++...+++ .+. .|+. +.|.+||..+.. ...+..
T Consensus 423 gt~~~Gl~~~d~~~~~-------~~~~~~~~~~l~~~~v~~i~~d~~g-~lw-igt~-~Gl~~~~~~~~~----~~~~~~ 488 (795)
T 4a2l_A 423 GTHAGGLSILHRNSGQ-------VENFNQRNSQLVNENVYAILPDGEG-NLW-LGTL-SALVRFNPEQRS----FTTIEK 488 (795)
T ss_dssp EETTTEEEEEETTTCC-------EEEECTTTSCCSCSCEEEEEECSSS-CEE-EEES-SCEEEEETTTTE----EEECCB
T ss_pred EeCcCceeEEeCCCCc-------EEEeecCCCCcCCCeeEEEEECCCC-CEE-EEec-CceeEEeCCCCe----EEEccc
Confidence 8887889999987652 12221 134578899888776 444 4444 458889987654 222211
Q ss_pred -------cCCCeeEEEeCCCCCc-cCCCCc
Q 020480 272 -------HQSEVGVSILNASFRL-SHEDTC 293 (325)
Q Consensus 272 -------h~~~v~~i~~~p~~~~-~~~~d~ 293 (325)
....|.++...++|.+ .+...+
T Consensus 489 ~~~~~~~~~~~i~~i~~d~~g~lWigt~~G 518 (795)
T 4a2l_A 489 EKDGTPVVSKQITTLFRDSHKRLWIGGEEG 518 (795)
T ss_dssp CTTCCBCCCCCEEEEEECTTCCEEEEESSC
T ss_pred cccccccCCceEEEEEECCCCCEEEEeCCc
Confidence 2357899999999986 343333
No 275
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.10 E-value=0.8 Score=40.53 Aligned_cols=150 Identities=7% Similarity=-0.021 Sum_probs=84.1
Q ss_pred CeeEEEecCC--CCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC---C
Q 020480 127 EVNRARYMPQ--NPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD---A 201 (325)
Q Consensus 127 ~v~~v~~~~~--~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d---g 201 (325)
....++|.|+ +..++++ ...+.|+.++... ..+..+.........+++++++. ++++.... .
T Consensus 140 ~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~-----------g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~ 206 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVN-----------QYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTN 206 (433)
T ss_dssp CCCEEEECTTTTTCEEEEE-CBTSCEEEEETTT-----------TEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTS
T ss_pred CCceEEEccccCCCEEEEE-eCCCCEEEEECCC-----------CEEEEeecCCCCccEEEECCCCC-EEEEcCCCCccc
Confidence 3567889984 3244444 3337899998865 12333444445688999999998 66665422 1
Q ss_pred c-EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc--CCCeeE
Q 020480 202 Q-ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH--QSEVGV 278 (325)
Q Consensus 202 ~-i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h--~~~v~~ 278 (325)
. +...+...... ....+. .-.....++++|.+..++++-..++.|+.+|..++.. ...+... ...-..
T Consensus 207 ~gv~~~~~~~~~~-----~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~---~~~~~~~~~~~~~~~ 277 (433)
T 4hw6_A 207 TGIYLFTRASGFT-----ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL---TEEEVMMDTKGSNFH 277 (433)
T ss_dssp EEEEEECGGGTTC-----CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE---EEEEEECSCCSSCEE
T ss_pred ceEEEEECCCCee-----cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE---EEEEeccCCCCCccc
Confidence 2 33333222110 001111 2234567888994446776766788899999876552 1222111 122346
Q ss_pred EEeCCCCC-c--cCCCCceEEee
Q 020480 279 SILNASFR-L--SHEDTCTCTHR 298 (325)
Q Consensus 279 i~~~p~~~-~--~~~~d~~~~~~ 298 (325)
|+|+|+|. + +......+...
T Consensus 278 ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 278 IVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp EEECTTSSEEEEEETTTTEEEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEE
Confidence 99999987 4 33333444443
No 276
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.10 E-value=2.5 Score=40.56 Aligned_cols=119 Identities=11% Similarity=-0.024 Sum_probs=79.2
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE-ecCCCceEEEEecCCCCCeEEEEeCC-CcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL-RGHSTEGYGLSWSKFKEGHLLSGSDD-AQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~~p~~~~~l~s~s~d-g~i 203 (325)
.....|++.+.+.+++++-...+.|.+.++.. .....+ ........+|++.|.+..++++-... +.|
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG-----------~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I 539 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG-----------VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKI 539 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTS-----------SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCC-----------CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeE
Confidence 45667888877767777777788999999875 112233 23345678999999866344444333 678
Q ss_pred EEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 204 CLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
.+.++.... ....+...-.....|++++.+..++++=...+.|..+++....
T Consensus 540 ~~~~~dG~~------~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 540 KKGGLNGVD------IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 591 (791)
T ss_dssp EEEETTSCC------EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred EEEecCCCc------eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCc
Confidence 888887532 1112222335688899998776666666677889999987654
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=95.00 E-value=1 Score=39.77 Aligned_cols=121 Identities=12% Similarity=0.148 Sum_probs=72.0
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCC----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeC
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSA----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg----~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
.......++|++++..++++...++ .+.+++... .......+.. ......++++|+...++++-..
T Consensus 177 ~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g---------~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~ 246 (430)
T 3tc9_A 177 GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRES---------GFKVITELTK-GQNCNGAETHPINGELYFNSWN 246 (430)
T ss_dssp CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGG---------TSCSEEEEEE-CSSCCCEEECTTTCCEEEEETT
T ss_pred CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCC---------ceeeeeeecc-CCCceEEEEeCCCCEEEEEECC
Confidence 3345678899998843555543222 344444332 1221223322 2345788999943336777667
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccC
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~ 259 (325)
++.|..++...... ..+... ........++|+|++..++++-...+.|..++...
T Consensus 247 ~~~V~~~~~~~~~~----~~~~~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 247 AGQVFRYDFTTQET----TPLFTI-QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEETTTTEE----EEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCEEEEEECCCCcE----EEEEEc-CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 88999999875421 011111 11234678999999854777777888999988764
No 278
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=94.87 E-value=1 Score=42.22 Aligned_cols=117 Identities=15% Similarity=0.091 Sum_probs=72.1
Q ss_pred eEEEecC-CCCcEEEEEecCC-----------eEEEEeCCCCCCCCCCCCCCCCcEEEec-CCCceEEEEecCCCCCeEE
Q 020480 129 NRARYMP-QNPFLIATKTVSA-----------EVYVFDYSKHPSKPPLDGACSPDLRLRG-HSTEGYGLSWSKFKEGHLL 195 (325)
Q Consensus 129 ~~v~~~~-~~~~~la~g~~dg-----------~v~vwd~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~~p~~~~~l~ 195 (325)
..+++.+ ++ ++++.|+.+. .+.+||... +.+..+..+.. +.....++++.+++. +++
T Consensus 189 ~~~av~~~~g-~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t--------~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv 258 (656)
T 1k3i_A 189 AAAAIEPTSG-RVLMWSSYRNDAFGGSPGGITLTSSWDPST--------GIVSDRTVTVTKHDMFCPGISMDGNGQ-IVV 258 (656)
T ss_dssp SEEEEETTTT-EEEEEEECCCTTTCSCCCSEEEEEEECTTT--------CCBCCCEEEECSCCCSSCEEEECTTSC-EEE
T ss_pred eeEEEEecCC-EEEEEecccccccccCCCCeEEEEEEeCCC--------CcEEeCcccCCCCCCccccccCCCCCC-EEE
Confidence 3567777 55 7888887543 688999887 55555555533 333445677778887 888
Q ss_pred EEeC-CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe-cC-----CcEEEEEccCCC
Q 020480 196 SGSD-DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DD-----QYLLIWDLRTPS 261 (325)
Q Consensus 196 s~s~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~-~d-----g~i~iwd~~~~~ 261 (325)
.|+. +..+.+||..+..- ..+..+...... .+++..+++ .+++.|+ .+ ..+.+||..+..
T Consensus 259 ~GG~~~~~v~~yd~~t~~W----~~~~~~~~~R~~-~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 259 TGGNDAKKTSLYDSSSDSW----IPGPDMQVARGY-QSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp ECSSSTTCEEEEEGGGTEE----EECCCCSSCCSS-CEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eCCCCCCceEEecCcCCce----eECCCCCccccc-cceEEecCC-eEEEEeCcccCCcccccceEeCCCCCc
Confidence 8874 46899999886521 111111111111 233445566 5888888 44 568999987654
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.81 E-value=0.08 Score=50.20 Aligned_cols=117 Identities=10% Similarity=-0.048 Sum_probs=72.2
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEecCCCCCeEEEEeCC-CcEEE
Q 020480 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWSKFKEGHLLSGSDD-AQICL 205 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~p~~~~~l~s~s~d-g~i~i 205 (325)
...|++.+.+.+++++-...+.|.++++.. .....+. ........|++.|.+..++++-... +.|.+
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg-----------~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~ 523 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKG-----------VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKK 523 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSS-----------CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEB
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCC-----------CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEE
Confidence 345677755545666655677888888765 1122222 1223457889998766455554333 67888
Q ss_pred EeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCC
Q 020480 206 WDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPS 261 (325)
Q Consensus 206 wd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~ 261 (325)
+++..... .......-...+.|+|+|++..++++-+..+.|..+|+....
T Consensus 524 ~~~dG~~~------~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~ 573 (699)
T 1n7d_A 524 GGLNGVDI------YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN 573 (699)
T ss_dssp CCSSSCCC------CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC
T ss_pred EeCCCCCe------eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc
Confidence 77764321 111111223456799999877788887888899999987543
No 280
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.79 E-value=0.11 Score=49.12 Aligned_cols=83 Identities=12% Similarity=0.126 Sum_probs=51.4
Q ss_pred CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCC
Q 020480 148 AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHE 227 (325)
Q Consensus 148 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 227 (325)
|.|..||+.+ .+.+..+..+. ++..-.+...+. +++.|+.||.++.||.++++ .+..+....
T Consensus 455 g~l~A~D~~t----------G~~~W~~~~~~-~~~~g~~~tagg-lvf~gt~dg~l~a~D~~tG~------~lw~~~~~~ 516 (689)
T 1yiq_A 455 GKLIAWDPVK----------QQAAWEVPYVT-IFNGGTLSTAGN-LVFEGSADGRVIAYAADTGE------KLWEQPAAS 516 (689)
T ss_dssp EEEEEEETTT----------TEEEEEEEESS-SCCCCEEEETTT-EEEEECTTSEEEEEETTTCC------EEEEEECSS
T ss_pred eeEEEEECCC----------CCeEeEccCCC-CccCccceECCC-EEEEECCCCcEEEEECCCCc------cceeeeCCC
Confidence 6688888776 23344444332 222223444455 89999999999999999984 455555332
Q ss_pred c-cEEEEEeecCCCcEEEEEec
Q 020480 228 G-VVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 228 ~-~v~~v~~~p~~~~~l~s~~~ 248 (325)
. ...-+.|..+|..++++.+.
T Consensus 517 ~~~~~p~ty~~~G~qyv~~~~G 538 (689)
T 1yiq_A 517 GVMAAPVTYSVDGEQYVTFMAG 538 (689)
T ss_dssp CCCSCCEEEEETTEEEEEEEEC
T ss_pred CcccCceEEEECCEEEEEEEec
Confidence 2 22446677788767665543
No 281
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.62 E-value=0.41 Score=40.58 Aligned_cols=115 Identities=7% Similarity=-0.005 Sum_probs=73.0
Q ss_pred eeEEEe---cCCCCcEEEEEe-------------cCCeEEEEeCC---CCCCCCCCCCCCCCcEEEe--cC---------
Q 020480 128 VNRARY---MPQNPFLIATKT-------------VSAEVYVFDYS---KHPSKPPLDGACSPDLRLR--GH--------- 177 (325)
Q Consensus 128 v~~v~~---~~~~~~~la~g~-------------~dg~v~vwd~~---~~~~~~~~~~~~~~~~~~~--~h--------- 177 (325)
+..|.| .|++ .++++.. .+..|..||+. + .+.+.... ..
T Consensus 65 ~sGl~~~~~D~~g-rL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~t----------g~~~~~~dL~~~~~~~~~~~g 133 (334)
T 2p9w_A 65 MSGLSLLTHDNSK-RLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSEN----------SKPVWSVNFEKVQDEFEKKAG 133 (334)
T ss_dssp EEEEEESSSSSCC-EEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTT----------CCCSEEEESHHHHHHHHHHHS
T ss_pred eeEEEEeccCCCC-cEEEEEcccccccccccccCCCCEEEEEcCCcCCC----------CCEEEEecCcccccccccccc
Confidence 468888 5775 6766543 25789999988 4 23333222 11
Q ss_pred --CCceEEEEecCCCCCeEEEEeCC-CcEEEEeCCCCCCCCcccce-Eee--ecCCccEEEEEeecCCCcEEEEEecCCc
Q 020480 178 --STEGYGLSWSKFKEGHLLSGSDD-AQICLWDINAAPKNKSLEAM-QIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQY 251 (325)
Q Consensus 178 --~~~v~~l~~~p~~~~~l~s~s~d-g~i~iwd~~~~~~~~~~~~~-~~~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~ 251 (325)
.....+++..++|+ ..++++.. +.|...+...... ... ... .......+.++++|++. +|++....|.
T Consensus 134 ~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~~----~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~ 207 (334)
T 2p9w_A 134 KRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKTV----STFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRA 207 (334)
T ss_dssp SCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCCE----EEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSS
T ss_pred ccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCEE----eeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCe
Confidence 12478999999998 78888888 8877777664311 100 001 11223467899999985 5555544999
Q ss_pred EEEEEccC
Q 020480 252 LLIWDLRT 259 (325)
Q Consensus 252 i~iwd~~~ 259 (325)
|..+|++.
T Consensus 208 L~~fD~~~ 215 (334)
T 2p9w_A 208 LTAFDVSK 215 (334)
T ss_dssp EEEEECSS
T ss_pred EEEEcCCC
Confidence 99999884
No 282
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.46 E-value=1.8 Score=35.95 Aligned_cols=150 Identities=15% Similarity=0.070 Sum_probs=78.2
Q ss_pred cCCCeeEEEecCCCCcEEEEEec-CC-eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC
Q 020480 124 HDGEVNRARYMPQNPFLIATKTV-SA-EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~-dg-~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
..+....+++.+++ +++++... ++ .|..++... +....+..+ ........++..+.+. .+++-..++
T Consensus 70 ~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~~~--------g~~~~~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g 138 (306)
T 2p4o_A 70 VEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVKSD--------GTVETLLTL-PDAIFLNGITPLSDTQ-YLTADSYRG 138 (306)
T ss_dssp CSSEEEEEEECTTS-CEEEEEECTTSCEEEEEECTT--------SCEEEEEEC-TTCSCEEEEEESSSSE-EEEEETTTT
T ss_pred CCCCceeEEEcCCC-cEEEEeccCCcceEEEEcCCC--------CeEEEEEeC-CCccccCcccccCCCc-EEEEECCCC
Confidence 34568899999998 46555433 22 466667554 222111111 1122234455444443 455555688
Q ss_pred cEEEEeCCCCCC-CCcc-cceE--eeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCee
Q 020480 202 QICLWDINAAPK-NKSL-EAMQ--IFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVG 277 (325)
Q Consensus 202 ~i~iwd~~~~~~-~~~~-~~~~--~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 277 (325)
.|.++|...+.. .... .... .....-...+.+ +|++..++++-...+.|..||+...........+. ......
T Consensus 139 ~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~ 215 (306)
T 2p4o_A 139 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFV-EQTNID 215 (306)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEE-ESCCCS
T ss_pred eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEe-ccCCCC
Confidence 999998764310 0000 0000 000111234455 77776677777788999999987521111122221 123456
Q ss_pred EEEeCCCCCc
Q 020480 278 VSILNASFRL 287 (325)
Q Consensus 278 ~i~~~p~~~~ 287 (325)
.++++++|.+
T Consensus 216 gi~vd~dG~l 225 (306)
T 2p4o_A 216 DFAFDVEGNL 225 (306)
T ss_dssp SEEEBTTCCE
T ss_pred CeEECCCCCE
Confidence 7888988875
No 283
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=94.38 E-value=1.9 Score=35.84 Aligned_cols=126 Identities=8% Similarity=0.068 Sum_probs=76.1
Q ss_pred CceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCe
Q 020480 114 GKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGH 193 (325)
Q Consensus 114 ~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~ 193 (325)
...+.+..+........++|.+++ +++++-..++.|..|+... .....+ ........+++.+++. +
T Consensus 20 ~~~~~~~~~p~~~~pegia~~~~g-~lyv~d~~~~~I~~~d~~g-----------~~~~~~-~~~~~p~gia~~~dG~-l 85 (306)
T 2p4o_A 20 APAKIITSFPVNTFLENLASAPDG-TIFVTNHEVGEIVSITPDG-----------NQQIHA-TVEGKVSGLAFTSNGD-L 85 (306)
T ss_dssp CCEEEEEEECTTCCEEEEEECTTS-CEEEEETTTTEEEEECTTC-----------CEEEEE-ECSSEEEEEEECTTSC-E
T ss_pred CCceEeEeCCCCCCcceEEECCCC-CEEEEeCCCCeEEEECCCC-----------ceEEEE-eCCCCceeEEEcCCCc-E
Confidence 345566666655678899999987 5777766789999998764 112222 2235688999999988 6
Q ss_pred EEEEeCCC--cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccC
Q 020480 194 LLSGSDDA--QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (325)
Q Consensus 194 l~s~s~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~ 259 (325)
+++..... .|..+|...+.. ..+... ........++..+. ...+++-...+.|.++|...
T Consensus 86 ~vad~~~~~~~v~~~d~~~g~~----~~~~~~-~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 86 VATGWNADSIPVVSLVKSDGTV----ETLLTL-PDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCE----EEEEEC-TTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTT
T ss_pred EEEeccCCcceEEEEcCCCCeE----EEEEeC-CCccccCcccccCC-CcEEEEECCCCeEEEEeCCC
Confidence 66554332 466677655421 111111 11122344444443 34555555688888888764
No 284
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.10 E-value=3.7 Score=38.14 Aligned_cols=145 Identities=8% Similarity=-0.006 Sum_probs=86.0
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
..-+....++|.+.+..++.+=...+.|..+++.. . ......+.........+++.+.+..++++-...+.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g--------~-~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~ 107 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNK--------T-ESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNR 107 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccC--------C-CceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCE
Confidence 34455678999987656666655677888888875 1 11122233323567889998866646677677899
Q ss_pred EEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEe-cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEe
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVG-DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSIL 281 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~ 281 (325)
|.+.++..... .......-.....|+++|.+..++.+-- ..+.|...++..... .......-...+.|++
T Consensus 108 I~v~~~dG~~~------~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~---~~l~~~~~~~P~Glal 178 (619)
T 3s94_A 108 IEVSNLDGSLR------KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR---FIIINSEIYWPNGLTL 178 (619)
T ss_dssp EEEEETTSCSC------EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSSEEEEEE
T ss_pred EEEEECCCCCE------EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce---EEEEeCCCCCCcEEEE
Confidence 99999986421 1112233345678999997655555542 245666666654431 2222223345678888
Q ss_pred CCCC
Q 020480 282 NASF 285 (325)
Q Consensus 282 ~p~~ 285 (325)
++.+
T Consensus 179 d~~~ 182 (619)
T 3s94_A 179 DYEE 182 (619)
T ss_dssp ETTT
T ss_pred EccC
Confidence 8753
No 285
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.81 E-value=2.6 Score=35.45 Aligned_cols=148 Identities=7% Similarity=-0.018 Sum_probs=74.3
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEE-
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC- 204 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~- 204 (325)
+.+..+.+.+++ .+++++ .+|.|. ..... ..... ....++...+..+.+.+++. +++.+. .|.+.
T Consensus 122 ~~~~~i~~~~~~-~~~~~~-~~g~v~--~S~Dg------G~tW~--~~~~~~~~~~~~~~~~~~~~-~~~~g~-~G~~~~ 187 (327)
T 2xbg_A 122 GSPRLIKALGNG-SAEMIT-NVGAIY--RTKDS------GKNWQ--ALVQEAIGVMRNLNRSPSGE-YVAVSS-RGSFYS 187 (327)
T ss_dssp SCEEEEEEEETT-EEEEEE-TTCCEE--EESST------TSSEE--EEECSCCCCEEEEEECTTSC-EEEEET-TSSEEE
T ss_pred CCeEEEEEECCC-CEEEEe-CCccEE--EEcCC------CCCCE--EeecCCCcceEEEEEcCCCc-EEEEEC-CCcEEE
Confidence 456677776655 556554 455443 22210 01121 11234556788999999876 565554 45443
Q ss_pred EEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEe-eccCCCeeEEEeCC
Q 020480 205 LWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV-VAHQSEVGVSILNA 283 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~i~~~p 283 (325)
-+|-. + ..+ ..+ -......+..+.+.+++ .++ .++.+|.+++.+...+..+..+..- ..+...+.++++.+
T Consensus 188 S~d~g-G-~tW--~~~--~~~~~~~~~~~~~~~~g-~~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~ 259 (327)
T 2xbg_A 188 TWEPG-Q-TAW--EPH--NRTTSRRLHNMGFTPDG-RLW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT 259 (327)
T ss_dssp EECTT-C-SSC--EEE--ECCSSSCEEEEEECTTS-CEE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS
T ss_pred EeCCC-C-Cce--eEC--CCCCCCccceeEECCCC-CEE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC
Confidence 33421 1 111 111 12344578889998876 444 5566788777642212211111110 01223578888988
Q ss_pred CCCc-cCCCCceE
Q 020480 284 SFRL-SHEDTCTC 295 (325)
Q Consensus 284 ~~~~-~~~~d~~~ 295 (325)
++.+ .++.++.+
T Consensus 260 ~~~~~~~g~~g~i 272 (327)
T 2xbg_A 260 PNEVWLAGGAGAL 272 (327)
T ss_dssp SSCEEEEESTTCE
T ss_pred CCEEEEEeCCCeE
Confidence 7764 33334434
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=93.57 E-value=4.7 Score=37.49 Aligned_cols=139 Identities=8% Similarity=-0.020 Sum_probs=80.6
Q ss_pred CeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 127 EVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
.+.+++|.+.+..++.+-...+.|+.++... . .....+.........+++.+.+.+++++-+..+.|.+.
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g--------~--~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~ 419 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDG--------S--GSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVT 419 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTS--------C--SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCC--------C--ccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEE
Confidence 4567788876545666655577888887764 1 11112222224556788876555467776778899999
Q ss_pred eCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEec-CCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCC
Q 020480 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGD-DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNAS 284 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~ 284 (325)
++..... .......-....+++++|....++.+-.. .+.|...++..... .......-...+.|++++.
T Consensus 420 ~~~G~~~------~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~---~~l~~~~l~~P~GlalD~~ 489 (619)
T 3s94_A 420 RLNGTMR------KILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR---VVLVNTSLGWPNGLALDYD 489 (619)
T ss_dssp ETTSCSC------EEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC---EEEECSSCSCEEEEEEETT
T ss_pred eCCCCeE------EEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc---EEEEeCCCCCCeeeEEccc
Confidence 9875421 11122233567899999974455555422 35666666654331 2222223346678888874
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=93.53 E-value=1.4 Score=40.64 Aligned_cols=76 Identities=11% Similarity=-0.064 Sum_probs=46.0
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCe-eE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEV-GV 278 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v-~~ 278 (325)
+|.|.-||+.+++. +....... .+..-.....+ .+++.|+.||.++.||.++++. +..+....... .-
T Consensus 465 ~G~l~A~D~~tG~~------~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG~~---lW~~~~~~g~~a~P 533 (582)
T 1flg_A 465 VGSLRAMDPVSGKV------VWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSGKE---LWKFQTGSGIVSPP 533 (582)
T ss_dssp SEEEEEECTTTCCE------EEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEECSSCCCSCC
T ss_pred cceEEEEECCCCCE------EEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCCCE---EEEecCCCCcccCc
Confidence 57889999988743 33322211 12111112234 4677799999999999999984 77665432211 23
Q ss_pred EEeCCCCC
Q 020480 279 SILNASFR 286 (325)
Q Consensus 279 i~~~p~~~ 286 (325)
+.|..+|+
T Consensus 534 ~~y~~~G~ 541 (582)
T 1flg_A 534 ITWEQDGE 541 (582)
T ss_dssp EEEEETTE
T ss_pred eEEEECCE
Confidence 66767777
No 288
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.31 E-value=2.3 Score=37.82 Aligned_cols=115 Identities=9% Similarity=0.120 Sum_probs=60.2
Q ss_pred ccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCceEEEEecCC---CCCe
Q 020480 123 NHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKF---KEGH 193 (325)
Q Consensus 123 ~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~p~---~~~~ 193 (325)
..-.....|+|.|+| +++++-...+.|++++... +....+..+.. .......|+|+|+ +..+
T Consensus 24 ~~l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~--------g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~l 94 (454)
T 1cru_A 24 SNLNKPHALLWGPDN-QIWLTERATGKILRVNPES--------GSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYI 94 (454)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEE
T ss_pred CCCCCceEEEEcCCC-cEEEEEcCCCEEEEEECCC--------CcEeEEecCCccccccCCCCceeEEEECCCcCcCCEE
Confidence 334566799999998 5666644335788887543 21221222211 2456789999995 4424
Q ss_pred EEEEeC------------CCcEEEEeCCCCCCC-Cccc-ceEeee-cCCccEEEEEeecCCCcEEEEEe
Q 020480 194 LLSGSD------------DAQICLWDINAAPKN-KSLE-AMQIFK-VHEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 194 l~s~s~------------dg~i~iwd~~~~~~~-~~~~-~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
.++-+. ...|.-|+....... .... .+..+. ........++|.|++. ++++.+
T Consensus 95 Yv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~-Lyv~~G 162 (454)
T 1cru_A 95 YISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK-IYYTIG 162 (454)
T ss_dssp EEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC-EEEEEC
T ss_pred EEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe-EEEEEC
Confidence 444432 235666665432110 0001 111111 1123468899999984 555544
No 289
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=93.28 E-value=0.94 Score=42.60 Aligned_cols=61 Identities=7% Similarity=-0.076 Sum_probs=40.2
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA 271 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 271 (325)
+|.|..||+.+++. +...... .......+...+ .+++.++.||.++.||.++++. +..+..
T Consensus 437 ~g~l~A~D~~tG~~------~W~~~~~-~~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~---l~~~~~ 497 (668)
T 1kv9_A 437 SGALLAWDPVKQKA------AWKVPYP-THWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEA---LWQFEA 497 (668)
T ss_dssp EEEEEEEETTTTEE------EEEEEES-SSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEEC
T ss_pred cceEEEEeCCCCcE------EEEccCC-CCCcCceeEeCC-CEEEEECCcccchhhhhhcChh---heEecC
Confidence 47899999988743 3333322 222223344445 5777889999999999999884 666543
No 290
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.01 E-value=0.8 Score=42.19 Aligned_cols=76 Identities=11% Similarity=-0.124 Sum_probs=44.2
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC-CeeE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS-EVGV 278 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~ 278 (325)
+|.|..||+.+++. +..+... ..+........+ .+++.++.||.|+.+|.++++. +..+..... .-..
T Consensus 443 ~g~l~a~D~~tG~~------~W~~~~~-~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG~~---lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 443 MGQIRAFDLTTGKA------KWTKWEK-FAAWGGTLYTKG-GLVWYATLDGYLKALDNKDGKE---LWNFKMPSGGIGSP 511 (571)
T ss_dssp CEEEEEECTTTCCE------EEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEECSSCCCSCC
T ss_pred CCeEEEEECCCCCE------EEEecCC-CCccceeEEECC-CEEEEEcCCCeEEEEECCCCCE---EEEEeCCCCcEeee
Confidence 57889999887743 3333221 122222223334 3566789999999999999984 666643221 1122
Q ss_pred EEeCCCCC
Q 020480 279 SILNASFR 286 (325)
Q Consensus 279 i~~~p~~~ 286 (325)
+.+..+|+
T Consensus 512 ~~~~~~G~ 519 (571)
T 2ad6_A 512 MTYSFKGK 519 (571)
T ss_dssp EEEEETTE
T ss_pred EEEEECCE
Confidence 34556665
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.79 E-value=1.7 Score=37.21 Aligned_cols=109 Identities=9% Similarity=-0.007 Sum_probs=59.9
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---cCCCceEEEEecCC---CCCeEEEEeC
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---GHSTEGYGLSWSKF---KEGHLLSGSD 199 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~p~---~~~~l~s~s~ 199 (325)
..-..++|.|+| .++++ ...|.|++++ .. ....+..+. ........|+++|+ +..++++-..
T Consensus 31 ~~P~~ia~~pdG-~l~V~-e~~g~I~~i~-~g---------~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~ 98 (352)
T 2ism_A 31 EVPWALAFLPDG-GMLIA-ERPGRIRLFR-EG---------RLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTV 98 (352)
T ss_dssp SCEEEEEECTTS-CEEEE-ETTTEEEEEE-TT---------EEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCceEEEEcCCC-eEEEE-eCCCeEEEEE-CC---------CccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEec
Confidence 455789999998 45555 5679999998 32 111111111 12356789999998 4424444443
Q ss_pred C-----CcEEEEeCCCCCCCCcccceEeee---cCCccEEEEEeecCCCcEEEEEe
Q 020480 200 D-----AQICLWDINAAPKNKSLEAMQIFK---VHEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 200 d-----g~i~iwd~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
. +.|..++............+..+. ........++|.|++ .++++.+
T Consensus 99 ~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G 153 (352)
T 2ism_A 99 AEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTG 153 (352)
T ss_dssp CTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECC
T ss_pred CCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEEC
Confidence 2 678888876421000000111122 111123679999998 5665543
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.75 E-value=7 Score=37.26 Aligned_cols=146 Identities=8% Similarity=0.005 Sum_probs=85.3
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---cCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---GHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
..|.++...+++ . |-.|+. +-|..|+... +......... .....|.++...+++. |..|+..+-
T Consensus 450 ~~v~~i~~d~~g-~-lwigt~-~Gl~~~~~~~--------~~~~~~~~~~~~~~~~~~i~~i~~d~~g~--lWigt~~~G 516 (781)
T 3v9f_A 450 LDVRVFYEDKNK-K-IWIGTH-AGVFVIDLAS--------KKVIHHYDTSNSQLLENFVRSIAQDSEGR--FWIGTFGGG 516 (781)
T ss_dssp CCEEEEEECTTS-E-EEEEET-TEEEEEESSS--------SSCCEEECTTTSSCSCSCEEEEEECTTCC--EEEEESSSC
T ss_pred CeEEEEEECCCC-C-EEEEEC-CceEEEeCCC--------CeEEecccCcccccccceeEEEEEcCCCC--EEEEEcCCC
Confidence 567888777766 3 444455 4588888765 1111110000 0135788999888876 444555444
Q ss_pred EEEEeCCCCCCCCcccceEeeec----CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeecc----CC
Q 020480 203 ICLWDINAAPKNKSLEAMQIFKV----HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAH----QS 274 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h----~~ 274 (325)
+..||..... ...+.. ....|.++...+++ .+. .|+..|.+..||..+.+ +..+... ..
T Consensus 517 l~~~~~~~~~-------~~~~~~~~~l~~~~i~~i~~d~~g-~lW-i~T~~Glv~~~d~~~~~----~~~~~~~~gl~~~ 583 (781)
T 3v9f_A 517 VGIYTPDMQL-------VRKFNQYEGFCSNTINQIYRSSKG-QMW-LATGEGLVCFPSARNFD----YQVFQRKEGLPNT 583 (781)
T ss_dssp EEEECTTCCE-------EEEECTTTTCSCSCEEEEEECTTS-CEE-EEETTEEEEESCTTTCC----CEEECGGGTCSCC
T ss_pred EEEEeCCCCe-------EEEccCCCCCCCCeeEEEEECCCC-CEE-EEECCCceEEECCCCCc----EEEccccCCCCCc
Confidence 7778876541 222221 23468888888876 444 44556655888887665 3333221 23
Q ss_pred CeeEEEeCCCCCc-cCCCCceEEe
Q 020480 275 EVGVSILNASFRL-SHEDTCTCTH 297 (325)
Q Consensus 275 ~v~~i~~~p~~~~-~~~~d~~~~~ 297 (325)
.|.++...++|.+ .++..+..++
T Consensus 584 ~i~~i~~d~~g~lW~~t~~Gl~~~ 607 (781)
T 3v9f_A 584 HIRAISEDKNGNIWASTNTGISCY 607 (781)
T ss_dssp CCCEEEECSSSCEEEECSSCEEEE
T ss_pred eEEEEEECCCCCEEEEcCCceEEE
Confidence 5788999988886 4445554444
No 293
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.74 E-value=1.2 Score=35.42 Aligned_cols=148 Identities=7% Similarity=-0.035 Sum_probs=75.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCC--CceEEEEecCCCCCeEEEEeCCCcE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHS--TEGYGLSWSKFKEGHLLSGSDDAQI 203 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~~p~~~~~l~s~s~dg~i 203 (325)
..+..++|+|++ .+.++ .+|.++-.+..+... ....-..+..+.. ....++.|.|++. +.++ .||.|
T Consensus 41 ~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~-----~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDN-----DNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKL 109 (236)
T ss_dssp TTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTT-----CCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEE
T ss_pred ccceeEEECCCc-cEEEE--eCCeEEEECCCCCCc-----ccccccccEecccccccceEEEECCCCC-EEEe--CCCEE
Confidence 367799999977 57776 778766666533100 0000011111111 1146889999987 5555 56999
Q ss_pred EEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCC---CeeEee-ccCCCeeE
Q 020480 204 CLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSK---PVQSVV-AHQSEVGV 278 (325)
Q Consensus 204 ~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~~~~-~h~~~v~~ 278 (325)
.-++--+......+..-..+.. -=..+..|.+.|+| .+.+.. |+.++-....+..... ....+. ..-.....
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~ 186 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKF 186 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCc-eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEE
Confidence 8887533222111111111111 11467899999998 566555 7775432222111100 001111 12223455
Q ss_pred EEeCCCCCc
Q 020480 279 SILNASFRL 287 (325)
Q Consensus 279 i~~~p~~~~ 287 (325)
+.|.++|.+
T Consensus 187 l~f~~~G~l 195 (236)
T 1tl2_A 187 LFFSSVGTL 195 (236)
T ss_dssp EEECTTSCE
T ss_pred EEECCCCcE
Confidence 779999886
No 294
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.63 E-value=4.4 Score=34.68 Aligned_cols=158 Identities=11% Similarity=0.078 Sum_probs=85.4
Q ss_pred CCeeEEEecCCCCcEEEEE------------ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec-----CCCceEEEEecC
Q 020480 126 GEVNRARYMPQNPFLIATK------------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG-----HSTEGYGLSWSK 188 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g------------~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~~p 188 (325)
.....+...|+| ..+.++ ..+|.|.++|..+.. .+...+ .+.+ .....+.+.+.+
T Consensus 50 ~G~EDi~~~~~G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~------~~~~~l-~~~g~~~~~~~f~PhGi~~~~ 121 (355)
T 3sre_A 50 NGSEDLEILPNG-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE------PAVSEL-EIIGNTLDISSFNPHGISTFI 121 (355)
T ss_dssp SCCCEEEECTTS-EEEEEECCC-----------CCEEEEEETTSSS------CCEEEC-EEECSSCCGGGCCEEEEEEEE
T ss_pred CCcceeEEcCCC-eEEEEeccccCCCcccCCCCCCeEEEEecCCCC------CceEEE-EccCCCCCcCceeeeeeEEEE
Confidence 345566777876 344443 268999999987411 111111 2333 223567787765
Q ss_pred --CCCCeEEEEe-C--CCcEEEEeCCCCCCCCcccceEeeecC-CccEEEEEeecCCCcEEEEEec--------------
Q 020480 189 --FKEGHLLSGS-D--DAQICLWDINAAPKNKSLEAMQIFKVH-EGVVEDVAWHLRHEYLFGSVGD-------------- 248 (325)
Q Consensus 189 --~~~~~l~s~s-~--dg~i~iwd~~~~~~~~~~~~~~~~~~~-~~~v~~v~~~p~~~~~l~s~~~-------------- 248 (325)
++...|+.+. . +.+|.+|++..... ....+..+.+. -...+++...++| .++++...
T Consensus 122 d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~--~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~ 198 (355)
T 3sre_A 122 DDDNTVYLLVVNHPGSSSTVEVFKFQEEEK--SLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHL 198 (355)
T ss_dssp CTTCCEEEEEEECSTTCCEEEEEEEETTTT--EEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHT
T ss_pred CCCCcEEEEEEECCCCCCeEEEEEEECCCC--EEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhc
Confidence 3432344443 2 46788888775432 12234444432 2468899999987 56665441
Q ss_pred ---CCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc---cCCCCceEEeeec
Q 020480 249 ---DQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL---SHEDTCTCTHRHS 300 (325)
Q Consensus 249 ---dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~---~~~~d~~~~~~~~ 300 (325)
.|.|.-+|. ++ +..+...-...+.|+|+|+++. +.+....+..+++
T Consensus 199 ~~~~g~vyr~d~--~~----~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~ 250 (355)
T 3sre_A 199 GLAWSFVTYYSP--ND----VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEK 250 (355)
T ss_dssp TCCCEEEEEECT--TC----CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEE
T ss_pred cCCccEEEEEEC--Ce----EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEE
Confidence 234444443 33 3333333456799999999973 2223344444443
No 295
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.56 E-value=5.6 Score=37.91 Aligned_cols=136 Identities=13% Similarity=-0.021 Sum_probs=83.3
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-EEecCCCceEEEEecCCCCCeEEEEeCCCcEE
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHSTEGYGLSWSKFKEGHLLSGSDDAQIC 204 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~ 204 (325)
..|.++...+++ . |-.|+.++-|..|+... +...... .-......|.++...+++. |..|+.++-+.
T Consensus 363 ~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~--------~~~~~~~~~~~~~~~~v~~i~~d~~g~--lWigt~~~Gl~ 430 (781)
T 3v9f_A 363 KVVSSVCDDGQG-K-LWIGTDGGGINVFENGK--------RVAIYNKENRELLSNSVLCSLKDSEGN--LWFGTYLGNIS 430 (781)
T ss_dssp SCEEEEEECTTS-C-EEEEEBSSCEEEEETTE--------EEEECC-----CCCSBEEEEEECTTSC--EEEEETTEEEE
T ss_pred cceEEEEEcCCC-C-EEEEeCCCcEEEEECCC--------CeEEEccCCCCCCCcceEEEEECCCCC--EEEEeccCCEE
Confidence 458888887766 3 44556566688888754 1111110 0012345788998887776 55577767788
Q ss_pred EEeCCCCCCCCcccceEeee---cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEee-cc-----CCC
Q 020480 205 LWDINAAPKNKSLEAMQIFK---VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVV-AH-----QSE 275 (325)
Q Consensus 205 iwd~~~~~~~~~~~~~~~~~---~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~h-----~~~ 275 (325)
.+|.+++. ...+. .....|.++...+++ .+. .|+. +-|..||..+.+. ..+. .. ...
T Consensus 431 ~~~~~~~~-------~~~~~~~~~~~~~v~~i~~d~~g-~lw-igt~-~Gl~~~~~~~~~~----~~~~~~~~~~~~~~~ 496 (781)
T 3v9f_A 431 YYNTRLKK-------FQIIELEKNELLDVRVFYEDKNK-KIW-IGTH-AGVFVIDLASKKV----IHHYDTSNSQLLENF 496 (781)
T ss_dssp EECSSSCE-------EEECCSTTTCCCCEEEEEECTTS-EEE-EEET-TEEEEEESSSSSC----CEEECTTTSSCSCSC
T ss_pred EEcCCCCc-------EEEeccCCCCCCeEEEEEECCCC-CEE-EEEC-CceEEEeCCCCeE----EecccCcccccccce
Confidence 99887542 22221 134578888888765 344 4555 5688899877652 2221 11 357
Q ss_pred eeEEEeCCCCCc
Q 020480 276 VGVSILNASFRL 287 (325)
Q Consensus 276 v~~i~~~p~~~~ 287 (325)
|.++...++|.+
T Consensus 497 i~~i~~d~~g~l 508 (781)
T 3v9f_A 497 VRSIAQDSEGRF 508 (781)
T ss_dssp EEEEEECTTCCE
T ss_pred eEEEEEcCCCCE
Confidence 899999999986
No 296
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=92.39 E-value=4.7 Score=34.42 Aligned_cols=111 Identities=9% Similarity=-0.047 Sum_probs=60.3
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---cCCCceEEEEecCC---CCCeEEEE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---GHSTEGYGLSWSKF---KEGHLLSG 197 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~~p~---~~~~l~s~ 197 (325)
.-.....++|.|++ .++++ ..+|.|++++... . ..+..+. ........|+++|+ +..++++-
T Consensus 27 ~l~~P~~ia~~pdG-~l~V~-e~~g~I~~~d~~G---------~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~ 94 (354)
T 3a9g_A 27 DLEVPWSIAPLGGG-RYLVT-ERPGRLVLISPSG---------K-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYA 94 (354)
T ss_dssp SCSCEEEEEEEETT-EEEEE-ETTTEEEEECSSC---------E-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEE
T ss_pred CCCCCeEEEEcCCC-eEEEE-eCCCEEEEEeCCC---------c-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEE
Confidence 34566789999988 55555 6679999997332 1 1122111 12346889999997 44244443
Q ss_pred eC---C----CcEEEEeCCCCCCC-Ccccc-eEeeec-CCccEEEEEeecCCCcEEEEEe
Q 020480 198 SD---D----AQICLWDINAAPKN-KSLEA-MQIFKV-HEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 198 s~---d----g~i~iwd~~~~~~~-~~~~~-~~~~~~-~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
+. + ..|..|+....... ..... +..+.. .......++|.|++ .++++.+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G 153 (354)
T 3a9g_A 95 SYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTG 153 (354)
T ss_dssp EEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECC
T ss_pred eccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEEC
Confidence 32 3 56777776543110 00011 111221 11124678999998 4665543
No 297
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.26 E-value=1 Score=42.37 Aligned_cols=73 Identities=10% Similarity=0.016 Sum_probs=44.7
Q ss_pred EEEecCCCCcEEEEEecCC-------------------eEEEEeCCCCCCCCCCCCCCCCcEEEec--CC-------Cce
Q 020480 130 RARYMPQNPFLIATKTVSA-------------------EVYVFDYSKHPSKPPLDGACSPDLRLRG--HS-------TEG 181 (325)
Q Consensus 130 ~v~~~~~~~~~la~g~~dg-------------------~v~vwd~~~~~~~~~~~~~~~~~~~~~~--h~-------~~v 181 (325)
.+++.|.+ .++..++.++ .|..+|..+ + +.+..++. |. .+.
T Consensus 234 ~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~t--------G--~~~W~~~~~~~~~wd~~~~~~~ 302 (668)
T 1kv9_A 234 SMAYDPEL-DLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDT--------G--KLAWHYQVTPGDSWDFTATQQI 302 (668)
T ss_dssp CEEEETTT-TEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTT--------C--CEEEEEESSTTCCSCCCCCSCE
T ss_pred ceEEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCC--------C--ceeeEeecCCCccccccCCCCc
Confidence 46777766 5777777665 388888876 2 33444432 22 222
Q ss_pred EEEEecCCCC--CeEEEEeCCCcEEEEeCCCCCC
Q 020480 182 YGLSWSKFKE--GHLLSGSDDAQICLWDINAAPK 213 (325)
Q Consensus 182 ~~l~~~p~~~--~~l~s~s~dg~i~iwd~~~~~~ 213 (325)
.......++. ..++.++.+|.++++|..+++.
T Consensus 303 ~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 303 TLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEETTEEEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEeccCCcEEEEEEEECCCCEEEEEECCCCCE
Confidence 2222222332 2588899999999999988753
No 298
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=91.38 E-value=2.6 Score=36.05 Aligned_cols=149 Identities=12% Similarity=0.085 Sum_probs=75.5
Q ss_pred CCeeEEEecCCCCc-EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEE----EecCCCceEEEEecCC---CCCeEEEE
Q 020480 126 GEVNRARYMPQNPF-LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLR----LRGHSTEGYGLSWSKF---KEGHLLSG 197 (325)
Q Consensus 126 ~~v~~v~~~~~~~~-~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~----~~~h~~~v~~l~~~p~---~~~~l~s~ 197 (325)
.....|+|.|+| + ++++ ...|.|++++..... ..++.. ..........|+++|+ +..++++-
T Consensus 18 ~~P~~i~~~pdG-~~l~V~-e~~G~i~~~~~~g~~--------~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~ 87 (353)
T 2g8s_A 18 DHPWALAFLPDN-HGMLIT-LRGGELRHWQAGKGL--------SAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSY 87 (353)
T ss_dssp SSEEEEEECSTT-CCEEEE-ETTTEEEEEETTTEE--------CCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEE
T ss_pred CCcEEEEEcCCC-CEEEEE-eCCceEEEEeCCCce--------eeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEE
Confidence 456789999998 5 5554 567999999854310 011111 1122345789999996 44244443
Q ss_pred eC-------CCcEEEEeCCCCCCC-Ccccc-eEeee---cCCccEEEEEeecCCCcEEEEEecC-------------CcE
Q 020480 198 SD-------DAQICLWDINAAPKN-KSLEA-MQIFK---VHEGVVEDVAWHLRHEYLFGSVGDD-------------QYL 252 (325)
Q Consensus 198 s~-------dg~i~iwd~~~~~~~-~~~~~-~~~~~---~~~~~v~~v~~~p~~~~~l~s~~~d-------------g~i 252 (325)
+. ...|..|++...... ..... +..+. ........++|.|++ .++++.+.. |.|
T Consensus 88 ~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 88 SEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred eCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEE
Confidence 32 235666666432110 00000 11111 011123579999998 555554432 355
Q ss_pred EEEEccCCCC-----------CCCeeEeeccCCCeeEEEeCC-CCCc
Q 020480 253 LIWDLRTPSV-----------SKPVQSVVAHQSEVGVSILNA-SFRL 287 (325)
Q Consensus 253 ~iwd~~~~~~-----------~~~~~~~~~h~~~v~~i~~~p-~~~~ 287 (325)
.-++....-. ...+.. .+|. ....++|+| .|.+
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a-~G~r-np~gl~~d~~~g~l 211 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWS-YGIR-NPQGMAMNPWSNAL 211 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEE-ECCS-EEEEEEEETTTTEE
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEE-EcCc-CccceEEECCCCCE
Confidence 5555543200 001221 2332 367899999 7776
No 299
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.37 E-value=1.4 Score=35.04 Aligned_cols=145 Identities=9% Similarity=-0.053 Sum_probs=74.0
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC--CCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCc
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH--STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKS 216 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~ 216 (325)
.+|.+..+| +|+.=..+..... .......++ +. -..+.+++|+|++. +.+. .+|.+.-.+..+......
T Consensus 5 ~~l~~v~~d-~~y~G~~P~~~~~----~~~~~a~~i-G~~gw~~~~~laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~W 75 (236)
T 1tl2_A 5 SMLRGVYQD-KFYQGTYPQNKND----NWLARATLI-GKGGWSNFKFLFLSPGGE-LYGV--LNDKIYKGTPPTHDNDNW 75 (236)
T ss_dssp CCEEEEETT-EEEEESCCCSTTC----CHHHHSEEE-ESSSCTTCSEEEECTTSC-EEEE--ETTEEEEESCCCSTTCCH
T ss_pred eEEEEEeCC-cEEecCCCCCccc----chhhhcccc-CccccccceeEEECCCcc-EEEE--eCCeEEEECCCCCCcccc
Confidence 467777777 7776665541100 000011222 23 24678999999776 4444 677766666543221111
Q ss_pred ccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCe---eEe-eccCCCeeEEEeCCCCCccCCC
Q 020480 217 LEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPV---QSV-VAHQSEVGVSILNASFRLSHED 291 (325)
Q Consensus 217 ~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~-~~h~~~v~~i~~~p~~~~~~~~ 291 (325)
...-..+.. --..-.++.|.|++ .+.++ .||.|+-++-.+.....=+ ..+ ..-=..+..|.|.|+|.+-+-.
T Consensus 76 ~~s~t~IG~~Gw~~F~a~~fD~~G-~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 76 MGRAKKIGNGGWNQFQFLFFDPNG-YLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH 152 (236)
T ss_dssp HHHCEEEECSCGGGCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE
T ss_pred cccccEecccccccceEEEECCCC-CEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe
Confidence 111111100 00113678999987 46655 6698877765443321000 111 1011467999999999973322
Q ss_pred CceE
Q 020480 292 TCTC 295 (325)
Q Consensus 292 d~~~ 295 (325)
++.+
T Consensus 153 dg~l 156 (236)
T 1tl2_A 153 GQQF 156 (236)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 5543
No 300
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=90.32 E-value=9 Score=33.72 Aligned_cols=116 Identities=8% Similarity=0.087 Sum_probs=66.6
Q ss_pred eeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC---------------CCceEEEEe------
Q 020480 128 VNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH---------------STEGYGLSW------ 186 (325)
Q Consensus 128 v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~------ 186 (325)
-..++|+|++..++++-...+.|+.+++.... +.......+.+. -.....+++
T Consensus 275 ~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~------~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y 348 (433)
T 4hw6_A 275 NFHIVWHPTGDWAYIIYNGKHCIYRVDYNRET------GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAY 348 (433)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEBCTTT------CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGG
T ss_pred cccEEEeCCCCEEEEEeCCCCEEEEEeCCCCC------cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccc
Confidence 34699999985466666677899998865310 111111122221 123567888
Q ss_pred ---cCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecC------------------CccEEEEEeecCCCcEEEE
Q 020480 187 ---SKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVH------------------EGVVEDVAWHLRHEYLFGS 245 (325)
Q Consensus 187 ---~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~------------------~~~v~~v~~~p~~~~~l~s 245 (325)
.+.+. ++++-...+.|+.++.. +. +..+.+. -.....|+++|.+..++++
T Consensus 349 ~~dd~~g~-lyvaD~~n~~I~~~~~~-G~-------v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVa 419 (433)
T 4hw6_A 349 AGEEDEYD-FYFCDRDSHTVRVLTPE-GR-------VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIG 419 (433)
T ss_dssp TTSSCCEE-EEEEETTTTEEEEECTT-SE-------EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEE
T ss_pred cccCCCCc-EEEEECCCCEEEEECCC-CC-------EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEE
Confidence 66665 66666677889998853 21 1121111 1235678888433356666
Q ss_pred EecCCcEEEEEcc
Q 020480 246 VGDDQYLLIWDLR 258 (325)
Q Consensus 246 ~~~dg~i~iwd~~ 258 (325)
=...+.|+.+++.
T Consensus 420 D~~n~rIr~i~~e 432 (433)
T 4hw6_A 420 DCDNHRVRKIAPE 432 (433)
T ss_dssp EGGGTEEEEEEEC
T ss_pred eCCCCEEEEEecC
Confidence 6666777776653
No 301
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=89.05 E-value=9.9 Score=32.39 Aligned_cols=114 Identities=11% Similarity=-0.019 Sum_probs=62.2
Q ss_pred cCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEE----ecCCCceEEEEecCC---CCCeEEE
Q 020480 124 HDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRL----RGHSTEGYGLSWSKF---KEGHLLS 196 (325)
Q Consensus 124 h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~~p~---~~~~l~s 196 (325)
.-..-..|+|.|+| .++++-...|.|++++... +....+..+ .........|+++|+ +..+.++
T Consensus 30 gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~--------g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~ 100 (347)
T 3das_A 30 GLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKT--------GRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAY 100 (347)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTCEEEEECTTT--------CCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEE
T ss_pred CCCCceEEEEcCCC-cEEEEEecCCEEEEEECCC--------CcEeeecccCceeecCCCCceeeEeccccccCCEEEEE
Confidence 45677899999998 5777654489999997543 211112111 123456789999995 3313332
Q ss_pred E--eCCCcEEEEeCCCCC----CCCcccc-eEeee-cCCccEEEEEeecCCCcEEEEEe
Q 020480 197 G--SDDAQICLWDINAAP----KNKSLEA-MQIFK-VHEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 197 ~--s~dg~i~iwd~~~~~----~~~~~~~-~~~~~-~~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
= ..++.|.-|.+.... ....... +..+. ........+.|.|++ .++++.+
T Consensus 101 yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~G 158 (347)
T 3das_A 101 FTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTG 158 (347)
T ss_dssp EECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECB
T ss_pred EecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEEC
Confidence 1 245566667665421 1000011 11121 111234569999998 4666644
No 302
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=88.66 E-value=9.3 Score=34.35 Aligned_cols=124 Identities=10% Similarity=0.174 Sum_probs=71.7
Q ss_pred CeeEEEe-------cCCCCcEEEEEecCC------eEEEEeCCCCCCCCCCCCCCC--C-cEEEecCCCceEEEEecCCC
Q 020480 127 EVNRARY-------MPQNPFLIATKTVSA------EVYVFDYSKHPSKPPLDGACS--P-DLRLRGHSTEGYGLSWSKFK 190 (325)
Q Consensus 127 ~v~~v~~-------~~~~~~~la~g~~dg------~v~vwd~~~~~~~~~~~~~~~--~-~~~~~~h~~~v~~l~~~p~~ 190 (325)
....++| .+++..++++-..++ .|.+++.... +... + ...+... .....++.+|++
T Consensus 187 ~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~-------G~~~~~~~~~~v~~~-~~p~giavdp~~ 258 (496)
T 3kya_A 187 RIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNAD-------GTFDDRSDIQLIAAY-KQCNGATIHPIN 258 (496)
T ss_dssp BEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTT-------SCCSTTSCEEEEEEE-SCCCCEEECTTT
T ss_pred CCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCC-------CceeecccceeeccC-CCceEEEEcCCC
Confidence 4788999 998854555544332 3666653220 1111 1 0222211 234678889966
Q ss_pred CCeEEEEeCCCcEEEEeCC-------CCCCCC----c----ccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEE
Q 020480 191 EGHLLSGSDDAQICLWDIN-------AAPKNK----S----LEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIW 255 (325)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~-------~~~~~~----~----~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iw 255 (325)
..++++-..++.|..+|+. .+.... . ...+... +.......++|+|++..++++-+....|+.+
T Consensus 259 g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~ki 337 (496)
T 3kya_A 259 GELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRS 337 (496)
T ss_dssp CCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEE
Confidence 6577777788899999997 332200 0 0011111 2234467899999985456666778889987
Q ss_pred EccC
Q 020480 256 DLRT 259 (325)
Q Consensus 256 d~~~ 259 (325)
+...
T Consensus 338 d~dg 341 (496)
T 3kya_A 338 DYDE 341 (496)
T ss_dssp EEET
T ss_pred ecCC
Confidence 6543
No 303
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=88.50 E-value=4.8 Score=37.26 Aligned_cols=76 Identities=12% Similarity=-0.204 Sum_probs=43.4
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCC-CeeE
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQS-EVGV 278 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~-~v~~ 278 (325)
.|.|.-||+.+++. +..... ......-.....+ .++..++.||.++.||.++++. +..++.... ...-
T Consensus 452 ~G~l~A~D~~tG~~------~W~~~~-~~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~tG~~---lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 452 LGQIKAYNAITGDY------KWEKME-RFAVWGGTMATAG-DLVFYGTLDGYLKARDSDTGDL---LWKFKIPSGAIGYP 520 (599)
T ss_dssp CEEEEEECTTTCCE------EEEEEE-SSCCCSBCEEETT-TEEEEECTTSEEEEEETTTCCE---EEEEECSSCCCSCC
T ss_pred cCeEEEEECCCCCE------EeEecC-CCCccCcceEecC-CEEEEECCCCeEEEEECCCCCE---EEEeeCCCCcEecc
Confidence 46788888887743 222221 1111111112234 4666799999999999999984 666643221 1233
Q ss_pred EEeCCCCC
Q 020480 279 SILNASFR 286 (325)
Q Consensus 279 i~~~p~~~ 286 (325)
+.|..+|+
T Consensus 521 ~~y~~~G~ 528 (599)
T 1w6s_A 521 MTYTHKGT 528 (599)
T ss_dssp EEEEETTE
T ss_pred EEEEeCCE
Confidence 55656676
No 304
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=88.48 E-value=16 Score=34.00 Aligned_cols=140 Identities=10% Similarity=0.024 Sum_probs=82.8
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec------CCCceEEEEecCCCCCeEEEEeC
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG------HSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
..+.++.|.+.+..++.+=...+.|+.++... ......+.. ....+.+|++...+.+++.+-+.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g----------~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~ 409 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDG----------SQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEA 409 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTS----------CSCEEEEC--------CCCEEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCC----------CCceEEEEcccccccccCCcceEEeeccCCeEEEEcCC
Confidence 44667888886645555545567788887654 111112221 23457889988877757778778
Q ss_pred CCcEEEEeCCCCCCCCcccceEe-eecCCccEEEEEeecCCCcEEEEEecCC--cEEEEEccCCCCCCCeeEeeccCCCe
Q 020480 200 DAQICLWDINAAPKNKSLEAMQI-FKVHEGVVEDVAWHLRHEYLFGSVGDDQ--YLLIWDLRTPSVSKPVQSVVAHQSEV 276 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~-~~~~~~~v~~v~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~v 276 (325)
.+.|.+.++... .... +........+++++|....++.+-.... .|...++..... .......-...
T Consensus 410 ~~~I~v~~~~G~-------~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~---~~l~~~~l~~P 479 (628)
T 4a0p_A 410 TNVINVTRLDGR-------SVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER---EVLFFSGLSKP 479 (628)
T ss_dssp TTEEEEEETTSC-------EEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC---EEEECSSCSCE
T ss_pred CCEEEEEECCCC-------eEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc---EEEEeccCCCc
Confidence 889999998743 1222 2233456889999995445666654433 455555544331 11222223456
Q ss_pred eEEEeCCCC
Q 020480 277 GVSILNASF 285 (325)
Q Consensus 277 ~~i~~~p~~ 285 (325)
+.|++++.+
T Consensus 480 ~gla~D~~~ 488 (628)
T 4a0p_A 480 IALALDSRL 488 (628)
T ss_dssp EEEEEETTT
T ss_pred cEEEEeCCC
Confidence 788888753
No 305
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=88.37 E-value=11 Score=32.13 Aligned_cols=127 Identities=10% Similarity=0.077 Sum_probs=76.9
Q ss_pred CCeeEEEe--cCCCC-cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCc
Q 020480 126 GEVNRARY--MPQNP-FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQ 202 (325)
Q Consensus 126 ~~v~~v~~--~~~~~-~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~ 202 (325)
..+..+++ +|... .++++...+|.+..|++....... -..+.++++.- .+.+-.+...+... .|+.+-.+.-
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~---~~~~lVR~f~l-gsq~EgcvvDd~~g-~Lyv~eEd~G 202 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY---ISGKKVRAFKM-NSQTEGMAADDEYG-RLYIAEEDEA 202 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC---EEEEEEEEEEC-SSCEEEEEEETTTT-EEEEEETTTE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc---ccceEEEEecC-CCCcceEEEcCCCC-eEEEecccce
Confidence 45666777 66443 356677888999999885311000 01233455543 35788888888776 7999999877
Q ss_pred EEEEeCCCCCCCCcccceEeee-c-CCccEEEEEee--cCCC-cEEEEEecCCcEEEEEcc
Q 020480 203 ICLWDINAAPKNKSLEAMQIFK-V-HEGVVEDVAWH--LRHE-YLFGSVGDDQYLLIWDLR 258 (325)
Q Consensus 203 i~iwd~~~~~~~~~~~~~~~~~-~-~~~~v~~v~~~--p~~~-~~l~s~~~dg~i~iwd~~ 258 (325)
|..++.+..... ....+..+. + -...+..|++- +++. .+|+|+-.+.+..+||..
T Consensus 203 Iw~~da~p~~~~-~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 203 IWKFSAEPDGGS-NGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEECSTTSCS-CCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEEEeCCcCCCC-CceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 777775533211 012232221 1 22367778774 4443 466666678899999997
No 306
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=87.27 E-value=4.5 Score=34.47 Aligned_cols=102 Identities=13% Similarity=0.069 Sum_probs=59.3
Q ss_pred CCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEee---ecCCccEEEEEeecC---CCcEEEEEecC--
Q 020480 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLR---HEYLFGSVGDD-- 249 (325)
Q Consensus 178 ~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~---~~~~l~s~~~d-- 249 (325)
-.....++|.|++. ++++ ..+|.|++++ .+.. ..+..+ .........++++|+ +..++++-...
T Consensus 30 l~~P~~ia~~pdG~-l~V~-e~~g~I~~i~--~g~~----~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~ 101 (352)
T 2ism_A 30 LEVPWALAFLPDGG-MLIA-ERPGRIRLFR--EGRL----STYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEG 101 (352)
T ss_dssp CSCEEEEEECTTSC-EEEE-ETTTEEEEEE--TTEE----EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTT
T ss_pred CCCceEEEEcCCCe-EEEE-eCCCeEEEEE--CCCc----cEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCC
Confidence 34567999999987 5554 5679999998 2211 111111 122356889999997 44566555543
Q ss_pred ---CcEEEEEccCCCCC--CCeeE-eec---cCCCeeEEEeCCCCCc
Q 020480 250 ---QYLLIWDLRTPSVS--KPVQS-VVA---HQSEVGVSILNASFRL 287 (325)
Q Consensus 250 ---g~i~iwd~~~~~~~--~~~~~-~~~---h~~~v~~i~~~p~~~~ 287 (325)
+.|..|+....... +.+.. +.. .......|+|.|+|.+
T Consensus 102 ~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~L 148 (352)
T 2ism_A 102 GLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGML 148 (352)
T ss_dssp SSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCE
T ss_pred CCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCE
Confidence 56777777643200 01111 221 0112468999999986
No 307
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=87.21 E-value=18 Score=33.16 Aligned_cols=57 Identities=11% Similarity=-0.058 Sum_probs=32.1
Q ss_pred cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeC-CCCCc-cCCCCceEEeeecce--eeeccC
Q 020480 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILN-ASFRL-SHEDTCTCTHRHSRY--LLYKFP 308 (325)
Q Consensus 248 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~-p~~~~-~~~~d~~~~~~~~~~--~~~~~~ 308 (325)
.+|.|..||+.+++. +..+.. ..++.+..+. ..+.+ .++.|+.+..++.+. ..|+++
T Consensus 442 ~~g~l~a~D~~tG~~---~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKA---KWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp CCEEEEEECTTTCCE---EEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCCE---EEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 357899999998873 555532 2222222222 23443 667788888877542 344443
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=86.35 E-value=29 Score=34.86 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=76.4
Q ss_pred CCceEEEEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcE-EEecCCC-ceEEEEecCCC
Q 020480 113 NGKVQIIQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDL-RLRGHST-EGYGLSWSKFK 190 (325)
Q Consensus 113 ~~~~~~~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~-~~~~h~~-~v~~l~~~p~~ 190 (325)
..+++++......++|++++-.. | .++|+ ...+|++|++.. . +.+. ....+.. .+..+.. .+
T Consensus 873 ~~kL~lv~~~~v~g~v~al~~~~-g-~Lla~--ig~~l~vy~l~~--------~--~~L~~~~~~~~~i~~~~l~~--~~ 936 (1158)
T 3ei3_A 873 DGKLQTVAEKEVKGAVYSMVEFN-G-KLLAS--INSTVRLYEWTT--------E--KELRTECNHYNNIMALYLKT--KG 936 (1158)
T ss_dssp TTEEEEEEEEEESSCEEEEEEET-T-EEEEE--ETTEEEEEEECT--------T--SCEEEEEEECCCSCEEEEEE--ET
T ss_pred CCEEEEEEEEEcCCcCEEEeeeC-C-EEEEE--cCCEEEEEECCC--------C--ceEEEEeeccccEEEEEEec--cC
Confidence 35788888888899999988654 4 44444 347899999975 1 1122 1111211 1224443 34
Q ss_pred CCeEEEEeCCCcEEEEeCCCCCCCCcccceEee--ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccC
Q 020480 191 EGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF--KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRT 259 (325)
Q Consensus 191 ~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~ 259 (325)
+ +++.|..-..|.+...+.... .+..+ ..+...++++.+--++ .++.+..+|.+.+.....
T Consensus 937 ~-~I~vgD~~~Sv~~~~y~~~~~-----~L~~~a~D~~~~~vta~~~ld~~--t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 937 D-FILVGDLMRSVLLLAYKPMEG-----NFEEIARDFNPNWMSAVEILDDD--NFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp T-EEEEEESSBCEEEEEEETTTT-----EEEEEEECCSCBCEEEEEEEETT--EEEEEETTSEEEEEEECT
T ss_pred C-EEEEEEhhheEEEEEEEcCCC-----eEEEEEeecccccEEEEEEEccC--cEEEEcCCCcEEEEecCC
Confidence 5 788998888888776554321 12222 2345678888886543 677889999999988765
No 309
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=85.94 E-value=4.9 Score=37.54 Aligned_cols=117 Identities=10% Similarity=-0.007 Sum_probs=64.7
Q ss_pred EEEEecC-CCCCeEEEEeCCC-----------cEEEEeCCCCCCCCcccceEeee-cCCccEEEEEeecCCCcEEEEEe-
Q 020480 182 YGLSWSK-FKEGHLLSGSDDA-----------QICLWDINAAPKNKSLEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVG- 247 (325)
Q Consensus 182 ~~l~~~p-~~~~~l~s~s~dg-----------~i~iwd~~~~~~~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~- 247 (325)
.+.++.+ ++. +++.|+.+. .+.+||..+..- ..+..+. .+.....++++.+++ .+++.|+
T Consensus 189 ~~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w----~~~~~~~~~~~~~~~~~~~~~~g-~lyv~GG~ 262 (656)
T 1k3i_A 189 AAAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGIV----SDRTVTVTKHDMFCPGISMDGNG-QIVVTGGN 262 (656)
T ss_dssp SEEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCCB----CCCEEEECSCCCSSCEEEECTTS-CEEEECSS
T ss_pred eeEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCcE----EeCcccCCCCCCccccccCCCCC-CEEEeCCC
Confidence 3566677 665 778776543 588999987643 1222221 122233346666776 6888888
Q ss_pred cCCcEEEEEccCCCCCCCeeEeeccCCCeeEEEeCCCCCc--cCC-CC-----ceEEeeecceeeec
Q 020480 248 DDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSILNASFRL--SHE-DT-----CTCTHRHSRYLLYK 306 (325)
Q Consensus 248 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~~~p~~~~--~~~-~d-----~~~~~~~~~~~~~~ 306 (325)
.+..+.+||..+..- ..+..+.. ...-.+++..++|++ .|| .+ ..+.+|+...-.|.
T Consensus 263 ~~~~v~~yd~~t~~W-~~~~~~~~-~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 263 DAKKTSLYDSSSDSW-IPGPDMQV-ARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp STTCEEEEEGGGTEE-EECCCCSS-CCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred CCCceEEecCcCCce-eECCCCCc-cccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcce
Confidence 456899999987642 11111111 112234566677775 455 23 34555665444443
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=85.59 E-value=16 Score=31.17 Aligned_cols=152 Identities=13% Similarity=0.135 Sum_probs=83.7
Q ss_pred ceEEEEEeccC--CCeeEEEecCCCCcEEEEEe-----------------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEe
Q 020480 115 KVQIIQQINHD--GEVNRARYMPQNPFLIATKT-----------------VSAEVYVFDYSKHPSKPPLDGACSPDLRLR 175 (325)
Q Consensus 115 ~~~~~~~~~h~--~~v~~v~~~~~~~~~la~g~-----------------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~ 175 (325)
....+..+.+. ...+.+.+.++| .++++.. ..|.|.-++... +..+.
T Consensus 152 ~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~-------------~~~~~ 217 (355)
T 3sre_A 152 SLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPND-------------VRVVA 217 (355)
T ss_dssp EEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTC-------------CEEEE
T ss_pred EEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEECCe-------------EEEee
Confidence 34555555543 457889999988 5666543 123444444321 22222
Q ss_pred cCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeec-CCCcEEEEEecC-CcEE
Q 020480 176 GHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHL-RHEYLFGSVGDD-QYLL 253 (325)
Q Consensus 176 ~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~l~s~~~d-g~i~ 253 (325)
..-.....++|+|++..++++-+..+.|..|++..... +...+.+ ......-.++..+ +| ++.+++..+ +.|.
T Consensus 218 ~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~---l~~~~~~-~~~g~PDGi~vD~e~G-~lwva~~~~g~~v~ 292 (355)
T 3sre_A 218 EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT---LTPLRVL-SFDTLVDNISVDPVTG-DLWVGCHPNGMRIF 292 (355)
T ss_dssp EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC---EEEEEEE-ECSSEEEEEEECTTTC-CEEEEEESCHHHHH
T ss_pred cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc---EecCEEE-eCCCCCceEEEeCCCC-cEEEEecCCceEEE
Confidence 22345689999999985666666789999999874321 1223333 2345667788888 46 566656533 3444
Q ss_pred EEEccCCCCCCCeeEeec---cCCCeeEEEeCCCCCc
Q 020480 254 IWDLRTPSVSKPVQSVVA---HQSEVGVSILNASFRL 287 (325)
Q Consensus 254 iwd~~~~~~~~~~~~~~~---h~~~v~~i~~~p~~~~ 287 (325)
.|+..... ...+..+.. -...+..+ |..+|+.
T Consensus 293 ~~~P~~~~-~s~v~rI~~~~~~~~~v~~v-~~ddG~~ 327 (355)
T 3sre_A 293 FYDAENPP-GSEVLRIQDILSEEPKVTVV-YAENGTV 327 (355)
T ss_dssp SCCTTSCC-CEEEEEEECTTSSSCEEEEE-EEECSSS
T ss_pred EECCCCCC-CCEEEEEEccCCCCcEEEEE-EEcCCCE
Confidence 44443211 112333321 12334444 6668875
No 311
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=84.73 E-value=12 Score=31.83 Aligned_cols=106 Identities=16% Similarity=0.106 Sum_probs=59.5
Q ss_pred CCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEe----eecCCccEEEEEeecC---CCcEEEEEe--
Q 020480 177 HSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI----FKVHEGVVEDVAWHLR---HEYLFGSVG-- 247 (325)
Q Consensus 177 h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~----~~~~~~~v~~v~~~p~---~~~~l~s~~-- 247 (325)
.-...+.|+|.|++. ++++--..|.|++++...+.. ..+.. +.........|+++|+ +..++++-+
T Consensus 30 gL~~P~~ia~~pdG~-llVter~~G~I~~v~~~~g~~----~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~ 104 (347)
T 3das_A 30 GLNSPWGLAPLPGGD-LLVSSRDEATITRVDAKTGRK----TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA 104 (347)
T ss_dssp CCSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE----EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS
T ss_pred CCCCceEEEEcCCCc-EEEEEecCCEEEEEECCCCcE----eeecccCceeecCCCCceeeEeccccccCCEEEEEEecC
Confidence 345678999999997 666665589999998654321 11211 1223457889999995 334544433
Q ss_pred cCCcEEEEEccCCC----CC-CC--ee-Eeec-cCCCeeEEEeCCCCCc
Q 020480 248 DDQYLLIWDLRTPS----VS-KP--VQ-SVVA-HQSEVGVSILNASFRL 287 (325)
Q Consensus 248 ~dg~i~iwd~~~~~----~~-~~--~~-~~~~-h~~~v~~i~~~p~~~~ 287 (325)
.++.|.-|.+.... .. .. +. .+.. ..-.-..|+|.|+|.+
T Consensus 105 ~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~L 153 (347)
T 3das_A 105 SDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKML 153 (347)
T ss_dssp SSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCE
T ss_pred CCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCE
Confidence 34445445544311 10 01 11 1111 1113466999999986
No 312
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=83.67 E-value=14 Score=32.64 Aligned_cols=105 Identities=9% Similarity=0.115 Sum_probs=58.1
Q ss_pred CCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEeee------cCCccEEEEEeecC---CCcEEEEEec
Q 020480 178 STEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIFK------VHEGVVEDVAWHLR---HEYLFGSVGD 248 (325)
Q Consensus 178 ~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~v~~v~~~p~---~~~~l~s~~~ 248 (325)
-...+.|+|.|++. ++++-...+.|++++...+.. ..+..+. ........|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~~g~~----~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~ 100 (454)
T 1cru_A 26 LNKPHALLWGPDNQ-IWLTERATGKILRVNPESGSV----KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTF 100 (454)
T ss_dssp CSSEEEEEECTTSC-EEEEETTTCEEEEECTTTCCE----EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEE
T ss_pred CCCceEEEEcCCCc-EEEEEcCCCEEEEEECCCCcE----eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEec
Confidence 34678999999997 666544445788887654321 1122221 12456789999995 4455555543
Q ss_pred ------------CCcEEEEEccCCCC----CCCeeE-eec-cCCCeeEEEeCCCCCc
Q 020480 249 ------------DQYLLIWDLRTPSV----SKPVQS-VVA-HQSEVGVSILNASFRL 287 (325)
Q Consensus 249 ------------dg~i~iwd~~~~~~----~~~~~~-~~~-h~~~v~~i~~~p~~~~ 287 (325)
...|.-|++..... .+.+.. +.. .......|+|.|+|.+
T Consensus 101 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~L 157 (454)
T 1cru_A 101 KNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKI 157 (454)
T ss_dssp ECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCE
T ss_pred cccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeE
Confidence 12455555433210 001111 111 1124688999999986
No 313
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=81.67 E-value=7.3 Score=33.21 Aligned_cols=101 Identities=11% Similarity=0.056 Sum_probs=57.7
Q ss_pred CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEee---ecCCccEEEEEeecC---CCcEEEEEec---C
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQIF---KVHEGVVEDVAWHLR---HEYLFGSVGD---D 249 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~~~v~~v~~~p~---~~~~l~s~~~---d 249 (325)
.....++|.|++. |+.+..+|.|+++|. .+. ..+..+ .........|+++|+ +..++++-+. +
T Consensus 29 ~~P~~ia~~pdG~--l~V~e~~g~I~~~d~-~G~-----~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~ 100 (354)
T 3a9g_A 29 EVPWSIAPLGGGR--YLVTERPGRLVLISP-SGK-----KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEG 100 (354)
T ss_dssp SCEEEEEEEETTE--EEEEETTTEEEEECS-SCE-----EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGG
T ss_pred CCCeEEEEcCCCe--EEEEeCCCEEEEEeC-CCc-----eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCC
Confidence 4568999999986 445566799999973 221 112111 122356889999997 4455555443 3
Q ss_pred ----CcEEEEEccCCC-CC---CCee-Eeecc-CCCeeEEEeCCCCCc
Q 020480 250 ----QYLLIWDLRTPS-VS---KPVQ-SVVAH-QSEVGVSILNASFRL 287 (325)
Q Consensus 250 ----g~i~iwd~~~~~-~~---~~~~-~~~~h-~~~v~~i~~~p~~~~ 287 (325)
..|..|+..... .. +.+. .+... ......|+|.|+|.+
T Consensus 101 ~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~L 148 (354)
T 3a9g_A 101 GHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGML 148 (354)
T ss_dssp GCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCE
T ss_pred CCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcE
Confidence 567777765431 00 0111 12111 113467999999986
No 314
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=80.89 E-value=5.5 Score=36.69 Aligned_cols=50 Identities=16% Similarity=0.371 Sum_probs=32.2
Q ss_pred eEEEEeCCCcEEEEeCCCCCCCCcccceEeeecCCcc-EEEEEeecCCCcEEEEEec
Q 020480 193 HLLSGSDDAQICLWDINAAPKNKSLEAMQIFKVHEGV-VEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-v~~v~~~p~~~~~l~s~~~ 248 (325)
+++.++.||.++.||.++++ .+..+...... ..-+.|..++..++++.+.
T Consensus 499 lvf~g~~dg~l~A~D~~tG~------~lW~~~~~~g~~a~P~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 499 LVFTGTGDGYFKAFDAKSGK------ELWKFQTGSGIVSPPITWEQDGEQYLGVTVG 549 (582)
T ss_dssp EEEEECTTSEEEEEETTTCC------EEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred EEEEECCCCcEEEEECCCCC------EEEEecCCCCcccCceEEEECCEEEEEEEcc
Confidence 78889999999999999884 35555433221 1225566677555555443
No 315
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=79.47 E-value=28 Score=29.63 Aligned_cols=129 Identities=12% Similarity=0.066 Sum_probs=72.5
Q ss_pred EEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC----CCC--e-EEEEeC--CCcEEEEeCCC
Q 020480 140 LIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF----KEG--H-LLSGSD--DAQICLWDINA 210 (325)
Q Consensus 140 ~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~----~~~--~-l~s~s~--dg~i~iwd~~~ 210 (325)
+++.....+-+.+||+.. +.+..+.. +.+..+..-|. +.. + +++.-. +++|++|++..
T Consensus 42 ~ii~t~k~~gL~Vydl~G-----------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp 108 (355)
T 3amr_A 42 KLITTNKKSGLVVYSLDG-----------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDG 108 (355)
T ss_dssp EEEEEETTTEEEEEETTS-----------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECT
T ss_pred EEEEEcCCCCEEEEcCCC-----------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECC
Confidence 455446678899999964 33555543 45666666552 110 2 333333 58899997743
Q ss_pred CCCCCcccceEeeec------CC-ccEEEEEe--ecC-CCcEEEEEecCCcEEEEEccCCCC----CCCeeEeeccCCCe
Q 020480 211 APKNKSLEAMQIFKV------HE-GVVEDVAW--HLR-HEYLFGSVGDDQYLLIWDLRTPSV----SKPVQSVVAHQSEV 276 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~------~~-~~v~~v~~--~p~-~~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~h~~~v 276 (325)
... .+..+.. .. ..+..+|+ +|. +..++++...+|.+..|++..... .+.+.++. ..+.+
T Consensus 109 ~~~-----~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~ 182 (355)
T 3amr_A 109 KNG-----TLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQT 182 (355)
T ss_dssp TTC-----CEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCE
T ss_pred CCC-----ceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCc
Confidence 221 1222211 11 45677777 664 334677788889999999954211 11344443 24566
Q ss_pred eEEEeCC-CCCc
Q 020480 277 GVSILNA-SFRL 287 (325)
Q Consensus 277 ~~i~~~p-~~~~ 287 (325)
-.++.++ .+.+
T Consensus 183 EgcvvDd~~g~L 194 (355)
T 3amr_A 183 EGMAADDEYGRL 194 (355)
T ss_dssp EEEEEETTTTEE
T ss_pred ceEEEcCCCCeE
Confidence 6677776 3444
No 316
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=77.23 E-value=32 Score=29.06 Aligned_cols=69 Identities=10% Similarity=0.060 Sum_probs=42.5
Q ss_pred ccEEEEEeec-------CCCcEEEEEecCCcEEEEEccCCCCCCCeeE--e-eccCCCeeEEEeCCCCCc-cCCCCceEE
Q 020480 228 GVVEDVAWHL-------RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS--V-VAHQSEVGVSILNASFRL-SHEDTCTCT 296 (325)
Q Consensus 228 ~~v~~v~~~p-------~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~-~~h~~~v~~i~~~p~~~~-~~~~d~~~~ 296 (325)
.....+.|.. ++ .++++.-..+.|...++...+ .+.. + ......+..|++.|+|.+ ...+....+
T Consensus 271 ~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~~~---~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~ 346 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNGDK---VTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGE 346 (353)
T ss_dssp CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEETTE---EEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEE
T ss_pred cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCCCe---EeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCE
Confidence 3566777763 33 577777777888888887543 1221 2 222357899999999986 323334555
Q ss_pred eeec
Q 020480 297 HRHS 300 (325)
Q Consensus 297 ~~~~ 300 (325)
+|.+
T Consensus 347 I~ri 350 (353)
T 2g8s_A 347 LLKV 350 (353)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5543
No 317
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=75.70 E-value=34 Score=30.37 Aligned_cols=60 Identities=10% Similarity=0.052 Sum_probs=35.7
Q ss_pred CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceE-eee-----cCCccEEEEEeecC
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQ-IFK-----VHEGVVEDVAWHLR 238 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~-~~~-----~~~~~v~~v~~~p~ 238 (325)
...+.|+|.|++...++.+...|.|++++.........+.-+. .+. ........|+++|+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 3467999999985346666788999999754321110000000 011 12456889999995
No 318
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=72.96 E-value=30 Score=28.11 Aligned_cols=62 Identities=15% Similarity=0.136 Sum_probs=31.4
Q ss_pred eEEEEeCC-----CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC-----cEEEEEccCCC
Q 020480 193 HLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ-----YLLIWDLRTPS 261 (325)
Q Consensus 193 ~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~ 261 (325)
+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++ .+++.|+.++ .+.+||+.+.+
T Consensus 207 iyv~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~~~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 207 LYAVGGHDGPLVRKSVEVYDPTTNAW----RQVADMNMCRRNAGVCAV--NG-LLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEECCBSSSSBCCCEEEEETTTTEE----EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEECCCCCCcccceEEEEeCCCCCE----eeCCCCCCccccCeEEEE--CC-EEEEECCcCCCcccccEEEEcCCCCe
Confidence 67777654 4688999876521 111111111111111222 33 5777777654 37777777654
No 319
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=72.79 E-value=60 Score=30.45 Aligned_cols=111 Identities=14% Similarity=0.077 Sum_probs=56.9
Q ss_pred CCCcEEEEEecCC------eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC--cEEEEe
Q 020480 136 QNPFLIATKTVSA------EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA--QICLWD 207 (325)
Q Consensus 136 ~~~~~la~g~~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg--~i~iwd 207 (325)
.+ .+++.||.++ .+.+||..+ ..+..+..+..- ..-.+++...++. +++.|+.++ .+.+||
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t--------~~W~~~~~~p~~-R~~h~~~~~~~~~-iyv~GG~~~~~~v~~yd 519 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKT--------REWSMIKSLSHT-RFRHSACSLPDGN-VLILGGVTEGPAMLLYN 519 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTT--------TEEEECCCCSBC-CBSCEEEECTTSC-EEEECCBCSSCSEEEEE
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCC--------CcEEECCCCCCC-cccceEEEEcCCE-EEEECCCCCCCCEEEEE
Confidence 44 6888877543 577888765 222222111111 1112233323455 777777654 689999
Q ss_pred CCCCCCCCcccceEe---eecCCccEEEEEeecCCCcEEEEEec--C-----CcEEEEEccCCC
Q 020480 208 INAAPKNKSLEAMQI---FKVHEGVVEDVAWHLRHEYLFGSVGD--D-----QYLLIWDLRTPS 261 (325)
Q Consensus 208 ~~~~~~~~~~~~~~~---~~~~~~~v~~v~~~p~~~~~l~s~~~--d-----g~i~iwd~~~~~ 261 (325)
..+..- ..+.. .........++.+......+++.||. + ..+.+||+.+..
T Consensus 520 ~~t~~W----~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 520 VTEEIF----KDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TTTTEE----EECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCCCce----EEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 876521 11111 11111112234455442357777775 2 458899998876
No 320
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=71.85 E-value=62 Score=29.79 Aligned_cols=21 Identities=10% Similarity=0.031 Sum_probs=17.8
Q ss_pred eEEEEeCCCcEEEEeCCCCCC
Q 020480 193 HLLSGSDDAQICLWDINAAPK 213 (325)
Q Consensus 193 ~l~s~s~dg~i~iwd~~~~~~ 213 (325)
.++.++.+|.+.+.|.++++.
T Consensus 325 ~v~~~~~~G~l~~lD~~tG~~ 345 (599)
T 1w6s_A 325 LLTHPDRNGIVYTLDRTDGAL 345 (599)
T ss_dssp EEEEECTTSEEEEEETTTCCE
T ss_pred EEEEECCCcEEEEEECCCCCE
Confidence 677889999999999988753
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=69.52 E-value=43 Score=27.07 Aligned_cols=105 Identities=12% Similarity=0.089 Sum_probs=50.8
Q ss_pred cEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-----CcEEEEeC
Q 020480 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (325)
Q Consensus 139 ~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-----g~i~iwd~ 208 (325)
.+++.|+.+ ..+.+||..+ ..+..+..+.........+.+ ++. +++.|+.+ ..+.+||+
T Consensus 161 ~iyv~GG~~~~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~ 229 (301)
T 2vpj_A 161 VIYCLGGYDGLNILNSVEKYDPHT--------GHWTNVTPMATKRSGAGVALL--NDH-IYVVGGFDGTAHLSSVEAYNI 229 (301)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTT--------TEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEET
T ss_pred EEEEECCCCCCcccceEEEEeCCC--------CcEEeCCCCCcccccceEEEE--CCE-EEEEeCCCCCcccceEEEEeC
Confidence 678887754 3588888876 222211111111111112222 333 67777654 46889998
Q ss_pred CCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-----CcEEEEEccCCC
Q 020480 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
.+..- ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 230 ~~~~W----~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 230 RTDSW----TTVTSMTTPRCYVGATVL--RG-RLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp TTTEE----EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCcE----EECCCCCCcccceeEEEE--CC-EEEEEcCcCCCcccccEEEEcCCCCe
Confidence 76521 111111111111112222 33 577777765 356778877654
No 322
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=68.71 E-value=30 Score=28.27 Aligned_cols=105 Identities=8% Similarity=-0.017 Sum_probs=50.8
Q ss_pred cEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-----CcEEEEeC
Q 020480 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (325)
Q Consensus 139 ~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-----g~i~iwd~ 208 (325)
.+++.|+.+ ..+.+||..+ ..+..+..+......-..+.+ ++. +++.|+.+ ..+.+||+
T Consensus 123 ~iyv~GG~~~~~~~~~~~~yd~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~ 191 (308)
T 1zgk_A 123 HIYAVGGSHGCIHHNSVERYEPER--------DEWHLVAPMLTRRIGVGVAVL--NRL-LYAVGGFDGTNRLNSAECYYP 191 (308)
T ss_dssp EEEEECCEETTEECCCEEEEETTT--------TEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEET
T ss_pred EEEEEcCCCCCcccccEEEECCCC--------CeEeECCCCCccccceEEEEE--CCE-EEEEeCCCCCCcCceEEEEeC
Confidence 677777644 3577888765 222111111111111112222 344 66666654 45888888
Q ss_pred CCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-----CcEEEEEccCCC
Q 020480 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
.+..- ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 192 ~~~~W----~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 192 ERNEW----RMITAMNTIRSGAGVCVL--HN-CIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TTTEE----EECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCeE----eeCCCCCCccccceEEEE--CC-EEEEEeCCCCCCccceEEEEeCCCCc
Confidence 76421 111111111111122222 33 677788765 558899988764
No 323
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=68.60 E-value=45 Score=26.94 Aligned_cols=105 Identities=10% Similarity=-0.001 Sum_probs=52.5
Q ss_pred cEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-----CcEEEEeC
Q 020480 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (325)
Q Consensus 139 ~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-----g~i~iwd~ 208 (325)
.+++.|+.+ ..+.+||... ..+..+..+......-..+.+ ++. +++.|+.+ ..+.+||+
T Consensus 114 ~lyv~GG~~~~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~d~ 182 (301)
T 2vpj_A 114 MIYVSGGFDGSRRHTSMERYDPNI--------DQWSMLGDMQTAREGAGLVVA--SGV-IYCLGGYDGLNILNSVEKYDP 182 (301)
T ss_dssp EEEEECCBCSSCBCCEEEEEETTT--------TEEEEEEECSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCCEEEEET
T ss_pred EEEEEcccCCCcccceEEEEcCCC--------CeEEECCCCCCCcccceEEEE--CCE-EEEECCCCCCcccceEEEEeC
Confidence 677777754 3688888876 323222222211111112222 344 66666654 45888888
Q ss_pred CCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-----CcEEEEEccCCC
Q 020480 209 NAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
.+..- ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 183 ~~~~W----~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 183 HTGHW----TNVTPMATKRSGAGVALL--ND-HIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp TTTEE----EEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CCCcE----EeCCCCCcccccceEEEE--CC-EEEEEeCCCCCcccceEEEEeCCCCc
Confidence 76521 111111111111122222 33 677788764 468899998765
No 324
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=67.66 E-value=57 Score=27.71 Aligned_cols=118 Identities=12% Similarity=0.190 Sum_probs=74.6
Q ss_pred EecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCC
Q 020480 132 RYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (325)
Q Consensus 132 ~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~ 211 (325)
-.+|.. +.+|.-. ...+.+||+.. ...+..+. ....|..-.|-... .|+-.+ +..|+-|++...
T Consensus 73 IMnP~~-~ViALra-g~~LQiFnlet----------K~klks~~-~~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~ 136 (365)
T 2xzh_A 73 IMNPAS-KVIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEGE 136 (365)
T ss_dssp EECSSS-SEEEEEE-TTEEEEEETTT----------TEEEEEEE-CSSCEEEEEECSSS--EEEEEE-SSEEEEEESSTT
T ss_pred eeCCCc-cEEEEec-CCeEEEechHH----------hhhhccee-cCCccEEEEecCCC--eEEEEc-CCcEEEEcccCC
Confidence 347765 5777654 67999999987 22233332 23577788886544 344444 468999999753
Q ss_pred CCCCcccceEeeecCC----ccEEEEEeecCCCcEEEEEe------cCCcEEEEEccCCCCCCCeeEeeccCC
Q 020480 212 PKNKSLEAMQIFKVHE----GVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQS 274 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~~----~~v~~v~~~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~h~~ 274 (325)
. .|...+..|. ..|..-..+++...++++|- -.|.+.+|...... -+.+++|.+
T Consensus 137 s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa 200 (365)
T 2xzh_A 137 S-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAA 200 (365)
T ss_dssp C-----CCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE----EEEECCSEE
T ss_pred C-----CCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc----cceeeeeee
Confidence 2 3555665553 46777777887765555553 34778899887654 455666644
No 325
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=65.94 E-value=52 Score=26.63 Aligned_cols=105 Identities=10% Similarity=0.096 Sum_probs=50.5
Q ss_pred cEEEEEecCC-----eEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-------CcEEEE
Q 020480 139 FLIATKTVSA-----EVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-------AQICLW 206 (325)
Q Consensus 139 ~~la~g~~dg-----~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-------g~i~iw 206 (325)
.+++.|+.++ .+.+||... ..+..+..+...... .++... ++. +++.|+.+ ..+.+|
T Consensus 110 ~iyv~GG~~~~~~~~~~~~~d~~~--------~~W~~~~~~p~~r~~-~~~~~~-~~~-iyv~GG~~~~~~~~~~~~~~y 178 (302)
T 2xn4_A 110 LLYAVGGFDGSTGLSSVEAYNIKS--------NEWFHVAPMNTRRSS-VGVGVV-GGL-LYAVGGYDVASRQCLSTVECY 178 (302)
T ss_dssp EEEEEEEECSSCEEEEEEEEETTT--------TEEEEECCCSSCCBS-CEEEEE-TTE-EEEECCEETTTTEECCCEEEE
T ss_pred EEEEEcCCCCCccCceEEEEeCCC--------CeEeecCCCCCcccC-ceEEEE-CCE-EEEEeCCCCCCCccccEEEEE
Confidence 6788887654 577888765 222111111111111 122221 333 66666542 458888
Q ss_pred eCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-----CcEEEEEccCCC
Q 020480 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
|+.+..- ..+..+.........+.+ ++ .+++.|+.+ ..+.+||+.+..
T Consensus 179 d~~~~~W----~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 179 NATTNEW----TYIAEMSTRRSGAGVGVL--NN-LLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ETTTTEE----EEECCCSSCCBSCEEEEE--TT-EEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred eCCCCcE----EECCCCccccccccEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCC
Confidence 9876521 111111111111122222 33 677788764 368899987764
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=62.57 E-value=43 Score=27.19 Aligned_cols=21 Identities=14% Similarity=0.378 Sum_probs=14.9
Q ss_pred cEEEEEecC-----CcEEEEEccCCC
Q 020480 241 YLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 241 ~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
.+++.|+.+ ..+.+||+.+..
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTTTE
T ss_pred EEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 577777754 458889988764
No 327
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=61.90 E-value=74 Score=27.04 Aligned_cols=27 Identities=11% Similarity=0.087 Sum_probs=16.8
Q ss_pred ceEEEEecCCC-CCeEEEEeCCCcEEEE
Q 020480 180 EGYGLSWSKFK-EGHLLSGSDDAQICLW 206 (325)
Q Consensus 180 ~v~~l~~~p~~-~~~l~s~s~dg~i~iw 206 (325)
.|.++++.|.. ...+..+...+.|...
T Consensus 116 ~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 116 HVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp EEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred ceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 57889998743 3356666656655544
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=61.58 E-value=45 Score=27.22 Aligned_cols=62 Identities=8% Similarity=0.015 Sum_probs=32.1
Q ss_pred cEEEEEecC-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCC-----CcEEEEeC
Q 020480 139 FLIATKTVS-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDD-----AQICLWDI 208 (325)
Q Consensus 139 ~~la~g~~d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~d-----g~i~iwd~ 208 (325)
.+++.|+.+ ..+.+||... ..+..+..+.........+.+ ++. +++.|+.+ ..+.+||+
T Consensus 170 ~iyv~GG~~~~~~~~~~~~yd~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~v~~yd~ 238 (308)
T 1zgk_A 170 LLYAVGGFDGTNRLNSAECYYPER--------NEWRMITAMNTIRSGAGVCVL--HNC-IYAAGGYDGQDQLNSVERYDV 238 (308)
T ss_dssp EEEEECCBCSSCBCCCEEEEETTT--------TEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEET
T ss_pred EEEEEeCCCCCCcCceEEEEeCCC--------CeEeeCCCCCCccccceEEEE--CCE-EEEEeCCCCCCccceEEEEeC
Confidence 677777654 3578888765 222111111111111122222 344 67777654 56889998
Q ss_pred CCC
Q 020480 209 NAA 211 (325)
Q Consensus 209 ~~~ 211 (325)
.+.
T Consensus 239 ~~~ 241 (308)
T 1zgk_A 239 ETE 241 (308)
T ss_dssp TTT
T ss_pred CCC
Confidence 765
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=59.27 E-value=70 Score=25.88 Aligned_cols=62 Identities=13% Similarity=0.126 Sum_probs=32.6
Q ss_pred eEEEEeCC-----CcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecC-----CcEEEEEccCCC
Q 020480 193 HLLSGSDD-----AQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDD-----QYLLIWDLRTPS 261 (325)
Q Consensus 193 ~l~s~s~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~ 261 (325)
+++.|+.+ ..+.+||+.+..- ..+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 203 i~v~GG~~~~~~~~~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 203 IFAVGGQNGLGGLDNVEYYDIKLNEW----KMVSPMPWKGVTVKCAAV--GS-IVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEECCEETTEEBCCEEEEETTTTEE----EECCCCSCCBSCCEEEEE--TT-EEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEEEeCCCCCCCCceEEEeeCCCCcE----EECCCCCCCccceeEEEE--CC-EEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 66666643 4588899876521 111111111111222222 33 678888854 457888887765
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=55.26 E-value=41 Score=27.55 Aligned_cols=62 Identities=8% Similarity=-0.022 Sum_probs=31.9
Q ss_pred cEEEEEec-C-----CeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCC-----cEEEEe
Q 020480 139 FLIATKTV-S-----AEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDA-----QICLWD 207 (325)
Q Consensus 139 ~~la~g~~-d-----g~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg-----~i~iwd 207 (325)
.+++.|+. + ..+.+||..+ ..+..+..+......-..+.+ ++. +++.|+.++ .+.+||
T Consensus 150 ~iyv~GG~~~~~~~~~~~~~yd~~~--------~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd 218 (315)
T 4asc_A 150 LVYVIGGKGSDRKCLNKMCVYDPKK--------FEWKELAPMQTARSLFGATVH--DGR-IIVAAGVTDTGLTSSAEVYS 218 (315)
T ss_dssp EEEEECCBCTTSCBCCCEEEEETTT--------TEEEECCCCSSCCBSCEEEEE--TTE-EEEEEEECSSSEEEEEEEEE
T ss_pred EEEEEeCCCCCCcccceEEEEeCCC--------CeEEECCCCCCchhceEEEEE--CCE-EEEEeccCCCCccceEEEEE
Confidence 67777776 2 3688888776 222211111111111112222 344 677776554 478888
Q ss_pred CCCC
Q 020480 208 INAA 211 (325)
Q Consensus 208 ~~~~ 211 (325)
+.+.
T Consensus 219 ~~~~ 222 (315)
T 4asc_A 219 ITDN 222 (315)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 8765
No 331
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=54.01 E-value=44 Score=30.61 Aligned_cols=90 Identities=10% Similarity=0.084 Sum_probs=59.8
Q ss_pred EEEeccCCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCC---cEEEecCCCceEEEEecCCCCCeEE
Q 020480 119 IQQINHDGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSP---DLRLRGHSTEGYGLSWSKFKEGHLL 195 (325)
Q Consensus 119 ~~~~~h~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~~p~~~~~l~ 195 (325)
...+.-......+..+|+|..++++|..+.+|.++++......... +...+ +..-..-.......+|.++|. ...
T Consensus 316 ~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~-k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~-aYT 393 (638)
T 3sbq_A 316 TRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAG-KLADPRDVIVGEPELGLGPLHTTFDGRGN-AYT 393 (638)
T ss_dssp EEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTT-CCSCGGGGEEECCBCCSCEEEEEECSSSE-EEE
T ss_pred EEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhc-cccCcccceEeeccCCCcccEEEECCCCc-eEe
Confidence 3455666667788999999877888888999999999752110000 00011 111111233567889999985 778
Q ss_pred EEeCCCcEEEEeCCC
Q 020480 196 SGSDDAQICLWDINA 210 (325)
Q Consensus 196 s~s~dg~i~iwd~~~ 210 (325)
|...|..|.-|++..
T Consensus 394 tlfidSqvvkWni~~ 408 (638)
T 3sbq_A 394 TLFIDSQVVKWNMEE 408 (638)
T ss_dssp EETTTTEEEEEEHHH
T ss_pred eeeecceEEEEeccH
Confidence 888999999999875
No 332
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=53.71 E-value=65 Score=31.57 Aligned_cols=32 Identities=13% Similarity=0.045 Sum_probs=26.5
Q ss_pred ceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCC
Q 020480 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP 212 (325)
Q Consensus 180 ~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 212 (325)
.+.++...++.. ++++-+.|+++|+|++.++.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCC
Confidence 456677777766 89999999999999998873
No 333
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=52.58 E-value=23 Score=29.94 Aligned_cols=111 Identities=5% Similarity=-0.019 Sum_probs=58.7
Q ss_pred cEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecC-CCceEEEEe--cCCCCCeEEEE-eCCCcEEEEeCCCCCCC
Q 020480 139 FLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGH-STEGYGLSW--SKFKEGHLLSG-SDDAQICLWDINAAPKN 214 (325)
Q Consensus 139 ~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~--~p~~~~~l~s~-s~dg~i~iwd~~~~~~~ 214 (325)
.++++++.||.|+-+|..+ + +...++... ..++....- .+.+...++.. +.||.|..++...+..
T Consensus 11 ~~V~v~t~dG~l~Ald~~t--------G--~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~- 79 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRN--------G--HIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQ- 79 (339)
T ss_dssp EEEEEEETTSCEEEEETTT--------T--EEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEE-
T ss_pred CEEEEEeCCCeEEEEECCC--------C--cEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcE-
Confidence 4677888899888888765 2 223333321 112211110 01122233333 6899999999876622
Q ss_pred CcccceEeeec----CCccEEEEE----e-ec---CCCcEEEEEecCCcEEEEEccCCCCCCCeeEe
Q 020480 215 KSLEAMQIFKV----HEGVVEDVA----W-HL---RHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSV 269 (325)
Q Consensus 215 ~~~~~~~~~~~----~~~~v~~v~----~-~p---~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 269 (325)
...+.. ..+++.. . . .+ .....+.+|+.+|.+...|+++++. +..+
T Consensus 80 -----~~~~~~~~lv~~SP~~~-~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~---~W~~ 137 (339)
T 2be1_A 80 -----KLPLSIRQLVSTSPLHL-KTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEI---ISAF 137 (339)
T ss_dssp -----EEEEEHHHHHTTCSEEE-ECC----------CCEEEEECEEEEEEEEEETTTCCE---EEEE
T ss_pred -----Eeeeccccceecccccc-CCCceeecccccccCCEEEEEecCCEEEEEECCCCcE---EEEE
Confidence 111111 1111211 0 0 00 0124678999999999999999884 5555
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=52.20 E-value=63 Score=29.66 Aligned_cols=80 Identities=10% Similarity=0.042 Sum_probs=55.9
Q ss_pred CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCC-----C-CcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcE
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPK-----N-KSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYL 252 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~-----~-~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i 252 (325)
...+.+..+|+|...+++|-.+.++.++|++.... . ..-..+..-..-.......+|.++| +...|---|..|
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G-~aYTtlfidSqv 401 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRG-NAYTTLFIDSQV 401 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSS-EEEEEETTTTEE
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCC-ceEeeeeecceE
Confidence 34578899999997777788899999999885211 0 0001111111234567889999987 677777799999
Q ss_pred EEEEccC
Q 020480 253 LIWDLRT 259 (325)
Q Consensus 253 ~iwd~~~ 259 (325)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999975
No 335
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=47.46 E-value=1.5e+02 Score=26.18 Aligned_cols=116 Identities=9% Similarity=0.065 Sum_probs=59.0
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe---------cCCCceEEEEecCC---CCCe
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR---------GHSTEGYGLSWSKF---KEGH 193 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~~p~---~~~~ 193 (325)
..-..|+|.|++...+.++...|.|++++..... ...++..+. ........|+++|+ +..+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~-------~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEI-------FKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCB-------CSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCe-------eeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 3456889999984234444778999999754310 011222221 12456789999996 2213
Q ss_pred EEEEeC--C----------CcEEEEeCCCCCCC----CcccceEeee--cCCccEEEEEeecCCCcEEEEEecC
Q 020480 194 LLSGSD--D----------AQICLWDINAAPKN----KSLEAMQIFK--VHEGVVEDVAWHLRHEYLFGSVGDD 249 (325)
Q Consensus 194 l~s~s~--d----------g~i~iwd~~~~~~~----~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~s~~~d 249 (325)
.++-+. + ..|.-|.+...... .....+..+. ........|+|.|++ .++++.+..
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~Gd~ 159 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILGDG 159 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEECCT
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeCCC
Confidence 343221 1 14545665432100 0001121221 112245789999998 455555543
No 336
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=46.84 E-value=1.4e+02 Score=31.05 Aligned_cols=109 Identities=11% Similarity=0.169 Sum_probs=66.4
Q ss_pred EecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCCC
Q 020480 132 RYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (325)
Q Consensus 132 ~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~ 211 (325)
-.+|.. +++|.- ...++.||++.. ...+..+. ....|..-.|-.... |+-.+ +..|..|++...
T Consensus 72 IMnP~~-~iiALr-ag~~lQiFnl~~----------k~klks~~-~~e~VvfWkWis~~~--l~lVT-~~aVyHW~~~~~ 135 (1630)
T 1xi4_A 72 IMNPAS-KVIALK-AGKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLNT--VALVT-DNAVYHWSMEGE 135 (1630)
T ss_pred ccCCCc-ceEEEe-cCCeEEEeehHH----------hhhhcccc-cCCCceEEEecCCCe--eEEEc-CCeEEEeccCCC
Confidence 345655 566664 467999999986 22232222 234677777865433 33333 568999999652
Q ss_pred CCCCcccceEeeecC----CccEEEEEeecCCCcEEEEEe------cCCcEEEEEccCCC
Q 020480 212 PKNKSLEAMQIFKVH----EGVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPS 261 (325)
Q Consensus 212 ~~~~~~~~~~~~~~~----~~~v~~v~~~p~~~~~l~s~~------~dg~i~iwd~~~~~ 261 (325)
. .|...|..| +..|..-..+++...++++|- -.|.+.+|......
T Consensus 136 s-----~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~ 190 (1630)
T 1xi4_A 136 S-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 190 (1630)
T ss_pred C-----ccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc
Confidence 2 344444444 456777777777765555553 45888899887654
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=45.85 E-value=86 Score=29.36 Aligned_cols=115 Identities=9% Similarity=0.080 Sum_probs=55.7
Q ss_pred CCCcEEEEEecCC--eEEEEeCCCCCCCCCCCCCCCCcEE---EecCCCceEEEEecCCCCCeEEEEeC--C-----CcE
Q 020480 136 QNPFLIATKTVSA--EVYVFDYSKHPSKPPLDGACSPDLR---LRGHSTEGYGLSWSKFKEGHLLSGSD--D-----AQI 203 (325)
Q Consensus 136 ~~~~~la~g~~dg--~v~vwd~~~~~~~~~~~~~~~~~~~---~~~h~~~v~~l~~~p~~~~~l~s~s~--d-----g~i 203 (325)
.+ .+++.|+.++ .+.+||... ..+..+.. +.........+.+......+++.|+. + ..+
T Consensus 500 ~~-~iyv~GG~~~~~~v~~yd~~t--------~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v 570 (695)
T 2zwa_A 500 DG-NVLILGGVTEGPAMLLYNVTE--------EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKA 570 (695)
T ss_dssp TS-CEEEECCBCSSCSEEEEETTT--------TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEE
T ss_pred CC-EEEEECCCCCCCCEEEEECCC--------CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcE
Confidence 44 6888887655 688898876 22221111 11111111234445442326666665 2 458
Q ss_pred EEEeCCCCCCCCc--ccceEeee-cCCccEEEEEeecCCCcEEEEEec--------CCcEEEEEccCCC
Q 020480 204 CLWDINAAPKNKS--LEAMQIFK-VHEGVVEDVAWHLRHEYLFGSVGD--------DQYLLIWDLRTPS 261 (325)
Q Consensus 204 ~iwd~~~~~~~~~--~~~~~~~~-~~~~~v~~v~~~p~~~~~l~s~~~--------dg~i~iwd~~~~~ 261 (325)
.+||+.+..-... ...+.... .......++.+ .++ .+++.||. ...+.+||+.+..
T Consensus 571 ~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 571 IIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPR-KLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp EEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETT-EEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred EEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCC-EEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 8999887641000 01111110 11111122222 223 57777774 3458899988765
No 338
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=45.27 E-value=78 Score=30.23 Aligned_cols=116 Identities=9% Similarity=0.009 Sum_probs=58.5
Q ss_pred CCCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CCCceEEEEecCCCCCeEEEEeCC
Q 020480 125 DGEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HSTEGYGLSWSKFKEGHLLSGSDD 200 (325)
Q Consensus 125 ~~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~p~~~~~l~s~s~d 200 (325)
.+.|.+|.++|.++..+.+++..+-|...+=.. ..+.++..... ....+.+|++.|..+..++.+...
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG--------~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~ 85 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGT--------SKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGR 85 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTT--------TEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECS
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCC--------CCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCc
Confidence 468999999998766777777777665444222 11222110000 124689999998654455555433
Q ss_pred Cc----EEEEeCCCCCCCCcccceEe-ee--c---CCccEEEEEeecCCCcEEEEEecCC
Q 020480 201 AQ----ICLWDINAAPKNKSLEAMQI-FK--V---HEGVVEDVAWHLRHEYLFGSVGDDQ 250 (325)
Q Consensus 201 g~----i~iwd~~~~~~~~~~~~~~~-~~--~---~~~~v~~v~~~p~~~~~l~s~~~dg 250 (325)
.. -.||-...+...+. .+.. +. + ....+..++++|.++..+..+...+
T Consensus 86 ~~~~~~~~v~~S~DgG~TW~--~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~ 143 (789)
T 1sqj_A 86 YVGDEWAAFYVSEDRGQSFT--IYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTE 143 (789)
T ss_dssp CTTSSCCEEEEESSTTSEEE--EEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSS
T ss_pred cCCCcccEEEEECCCCCcce--eccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccC
Confidence 11 34443333322211 1110 00 0 0113456788886555565665333
No 339
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.80 E-value=1.4e+02 Score=25.20 Aligned_cols=68 Identities=9% Similarity=-0.068 Sum_probs=34.2
Q ss_pred CceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCCCCCcccceEe-eec---------CCccEEEEEeecCCCcEEEEEec
Q 020480 179 TEGYGLSWSKFKEGHLLSGSDDAQICLWDINAAPKNKSLEAMQI-FKV---------HEGVVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 179 ~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~~~~~~~~~~~-~~~---------~~~~v~~v~~~p~~~~~l~s~~~ 248 (325)
..+.+|.++|.....+..+..++.|...+ .+...+. .+.. ... ....+.++.++|.++..+..+..
T Consensus 177 ~~i~~i~~d~~~~~~l~vg~~~ggl~~s~--DgG~tW~--~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~ 252 (394)
T 3b7f_A 177 PKMHSILVDPRDPKHLYIGMSSGGVFEST--DAGTDWK--PLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH 252 (394)
T ss_dssp CEEEEEEECTTCTTCEEEEEETBEEEEES--STTSSCE--ECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET
T ss_pred CceeEEEECCCCCCEEEEEECCCCEEEEC--CCCCCce--ECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC
Confidence 35789999885433455555444444332 2222111 1100 000 01348889999875456666665
Q ss_pred CC
Q 020480 249 DQ 250 (325)
Q Consensus 249 dg 250 (325)
.+
T Consensus 253 ~g 254 (394)
T 3b7f_A 253 CG 254 (394)
T ss_dssp TE
T ss_pred Ce
Confidence 44
No 340
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=44.08 E-value=1.7e+02 Score=25.94 Aligned_cols=121 Identities=12% Similarity=0.193 Sum_probs=75.9
Q ss_pred EEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEEeCCC
Q 020480 131 ARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLWDINA 210 (325)
Q Consensus 131 v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~ 210 (325)
.-.+|.. +.+|.-. ..++.+||+.. ...+..+. ....|..-.|-... .|+-.+ +..|+-|++..
T Consensus 71 AIMnP~~-~iiALra-g~~lQiFnle~----------K~klks~~-~~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~ 134 (494)
T 1bpo_A 71 AIMNPAS-KVIALKA-GKTLQIFNIEM----------KSKMKAHT-MTDDVTFWKWISLN--TVALVT-DNAVYHWSMEG 134 (494)
T ss_dssp EEECSSS-SCEEEEE-TTEEEEEETTT----------TEEEEEEE-CSSCCCEEEEEETT--EEEEEC-SSEEEEEESSS
T ss_pred eeeCCCC-cEEEEec-CCeEEEEchHH----------hhhhccee-cCCCceEEEecCCC--eEEEEc-CCeeEEecccC
Confidence 3456765 5677644 67999999987 22233332 23467777775443 344433 57899999975
Q ss_pred CCCCCcccceEeeecCC----ccEEEEEeecCCCcEEEEEe------cCCcEEEEEccCCCCCCCeeEeeccCCCe
Q 020480 211 APKNKSLEAMQIFKVHE----GVVEDVAWHLRHEYLFGSVG------DDQYLLIWDLRTPSVSKPVQSVVAHQSEV 276 (325)
Q Consensus 211 ~~~~~~~~~~~~~~~~~----~~v~~v~~~p~~~~~l~s~~------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v 276 (325)
.. .|...|..|. ..|..-..+++...++++|- -.|.+.+|...... -+.+++|.+..
T Consensus 135 ~s-----~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~----sQ~ieGhaa~F 201 (494)
T 1bpo_A 135 ES-----QPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV----SQPIEGHAASF 201 (494)
T ss_dssp SC-----CCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC----EEEECCSEEEE
T ss_pred CC-----CchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc----cchheeeeeee
Confidence 32 3566666553 46777777887765555553 34778899887765 46666765433
No 341
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=43.96 E-value=61 Score=26.99 Aligned_cols=11 Identities=9% Similarity=-0.272 Sum_probs=6.5
Q ss_pred cEEEEEccCCC
Q 020480 251 YLLIWDLRTPS 261 (325)
Q Consensus 251 ~i~iwd~~~~~ 261 (325)
.+.+||+.+.+
T Consensus 286 ~~~~yd~~~~~ 296 (357)
T 2uvk_A 286 STDIHLWHNGK 296 (357)
T ss_dssp CCEEEECC---
T ss_pred eEEEEecCCCc
Confidence 57789988765
No 342
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=43.73 E-value=81 Score=29.79 Aligned_cols=113 Identities=11% Similarity=-0.006 Sum_probs=59.1
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CCCceEEEEecCCCCCeEEEEeCC-
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HSTEGYGLSWSKFKEGHLLSGSDD- 200 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~p~~~~~l~s~s~d- 200 (325)
+.|..|+++|.++..+.++...|.|.-.+-.. ....++....+ ....|.+|+++|..++.++.+...
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G--------~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~ 94 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPST--------ETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMY 94 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTT--------TEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCC--------CCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEeccc
Confidence 38999999998766677777666655554322 11221110001 023588999999654455555421
Q ss_pred ------CcEEEEeCCCCCCCCcccceEe-ee--cC---CccEEEEEeecCCCcEEEEEec
Q 020480 201 ------AQICLWDINAAPKNKSLEAMQI-FK--VH---EGVVEDVAWHLRHEYLFGSVGD 248 (325)
Q Consensus 201 ------g~i~iwd~~~~~~~~~~~~~~~-~~--~~---~~~v~~v~~~p~~~~~l~s~~~ 248 (325)
+...||-...+.+.+.. +.. +. ++ ...+..++++|.++..+..+..
T Consensus 95 ~~~~~~~~~~l~~S~DgG~TW~~--~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 95 TNDWLPNMGAILRSTDRGETWEK--TILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp SSSSSCCCCEEEEESSSSSSCEE--EECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred ccccccCCccEEEeCCCCCCccc--CCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 12455655444333221 111 11 00 1124678889876666666653
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=41.11 E-value=80 Score=26.21 Aligned_cols=54 Identities=6% Similarity=-0.041 Sum_probs=24.9
Q ss_pred cEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCC------cEEEEEccCCCC
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQ------YLLIWDLRTPSV 262 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg------~i~iwd~~~~~~ 262 (325)
.+.+||+.+..- ..+..+......-.++. .++ .+++.|+.++ .|.++++++.+.
T Consensus 286 ~~~~yd~~~~~W----~~~~~~p~~r~~~~~~~--~~~-~i~v~GG~~~~~~~~~~v~~l~~~~~~~ 345 (357)
T 2uvk_A 286 STDIHLWHNGKW----DKSGELSQGRAYGVSLP--WNN-SLLIIGGETAGGKAVTDSVLITVKDNKV 345 (357)
T ss_dssp CCEEEECC---C----EEEEECSSCCBSSEEEE--ETT-EEEEEEEECGGGCEEEEEEEEEC-CCSC
T ss_pred eEEEEecCCCce----eeCCCCCCCcccceeEE--eCC-EEEEEeeeCCCCCEeeeEEEEEEcCcEe
Confidence 577888876532 12222221111112222 234 6778888553 355667777763
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=40.00 E-value=3.5e+02 Score=28.27 Aligned_cols=124 Identities=11% Similarity=0.203 Sum_probs=66.8
Q ss_pred CeeEEEecCCCCcEEEEE------ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEec--CCCCCeEEEEe
Q 020480 127 EVNRARYMPQNPFLIATK------TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS--KFKEGHLLSGS 198 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la~g------~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--p~~~~~l~s~s 198 (325)
.|-.-+.+++...++++| .-.|.+.+|+... .....+.||......+... +....+++.+.
T Consensus 152 QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er-----------~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~ 220 (1630)
T 1xi4_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-----------KVSQPIEGHAASFAQFKMEGNAEESTLFCFAV 220 (1630)
T ss_pred eeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccc-----------ccchhhhHhHhhhheeccCCCCCCceEEEEEE
Confidence 344445555553333333 2458899999876 2234456666544433332 22222333333
Q ss_pred C---CCcEEEEeCCCC-CCCCcc--cceEeee---cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC
Q 020480 199 D---DAQICLWDINAA-PKNKSL--EAMQIFK---VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 199 ~---dg~i~iwd~~~~-~~~~~~--~~~~~~~---~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
. .+.++|-++... ...... ..+..+. ....-..++..++.. .++..-+.-|.+++||+.++.+
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC 292 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEecccc-CEEEEEecCceEEEEecccchh
Confidence 2 268899888654 111000 0111111 112334456677764 4777888999999999999875
No 345
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=38.03 E-value=2.2e+02 Score=25.34 Aligned_cols=139 Identities=12% Similarity=0.197 Sum_probs=80.4
Q ss_pred CCeeEEEecCCCCcEEEEEe------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCC--CCCeEEEE
Q 020480 126 GEVNRARYMPQNPFLIATKT------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKF--KEGHLLSG 197 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~--~~~~l~s~ 197 (325)
..|-.-+.+++...++++|- -.|.+.+|+.+. +....+.||......+...-+ ...+++.+
T Consensus 151 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-----------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 219 (494)
T 1bpo_A 151 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-----------KVSQPIEGHAASFAQFKMEGNAEESTLFCFA 219 (494)
T ss_dssp CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-----------CCEEEECCSEEEEEEEECTTCSSEEEEEEEE
T ss_pred ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-----------cccchheeeeeeeEEEecCCCCCCceEEEEE
Confidence 34444555666643333332 347889999886 445678888765544444321 12245555
Q ss_pred eCC---CcEEEEeCCCCC-CCCcc--cceEee---ecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeE
Q 020480 198 SDD---AQICLWDINAAP-KNKSL--EAMQIF---KVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (325)
Q Consensus 198 s~d---g~i~iwd~~~~~-~~~~~--~~~~~~---~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 268 (325)
... +.++|-++.... ..... +.+..+ .....--.++..++.. .++..-+.-|.|++||+.++.+ +..
T Consensus 220 ~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviTK~G~i~lyDleTgt~---i~~ 295 (494)
T 1bpo_A 220 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC---IYM 295 (494)
T ss_dssp ECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCE---EEE
T ss_pred EecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccC-CEEEEEecCceEEEEeccccee---eee
Confidence 543 789999986541 11100 111111 1123445567888865 5778889999999999999985 555
Q ss_pred eeccCCCeeEE
Q 020480 269 VVAHQSEVGVS 279 (325)
Q Consensus 269 ~~~h~~~v~~i 279 (325)
-.-...+|..-
T Consensus 296 nrIs~~~iF~t 306 (494)
T 1bpo_A 296 NRISGETIFVT 306 (494)
T ss_dssp EECCSSCEEEE
T ss_pred ecccCCceEEe
Confidence 44444455433
No 346
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=35.93 E-value=3.2e+02 Score=26.71 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=27.0
Q ss_pred cEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC
Q 020480 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 229 ~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
.+.+++..++. .++.+-+.|+.+|+|++.++++
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCe
Confidence 56677777664 6888999999999999998764
No 347
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=30.37 E-value=2.2e+02 Score=23.03 Aligned_cols=21 Identities=19% Similarity=0.360 Sum_probs=14.2
Q ss_pred cEEEEEecC-------CcEEEEEccCCC
Q 020480 241 YLFGSVGDD-------QYLLIWDLRTPS 261 (325)
Q Consensus 241 ~~l~s~~~d-------g~i~iwd~~~~~ 261 (325)
.+++.|+.+ ..+.+||+.+.+
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 138 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAAK 138 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTTE
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCCC
Confidence 577777754 347788887654
No 348
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.49 E-value=3.7e+02 Score=25.10 Aligned_cols=143 Identities=6% Similarity=-0.040 Sum_probs=73.0
Q ss_pred CeeEEEecCCCCcEEE-EEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEec----CCCceEEEEecCCCCCeEEEEeCCC
Q 020480 127 EVNRARYMPQNPFLIA-TKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLRG----HSTEGYGLSWSKFKEGHLLSGSDDA 201 (325)
Q Consensus 127 ~v~~v~~~~~~~~~la-~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~~p~~~~~l~s~s~dg 201 (325)
.|.++...++| ++.+ .|+..| |..++... + ....+.. ....+.++....++. +. .|+..|
T Consensus 473 ~i~~i~~d~~g-~lWi~~~t~~G-l~~~d~~~--------~---~~~~~~~~~~~~~~~~~~i~~d~~g~-lW-igt~~G 537 (758)
T 3ott_A 473 FINQIIPDNEG-NVWVLLYNNKG-IDKINPRT--------R---EVTKLFADELTGEKSPNYLLCDEDGL-LW-VGFHGG 537 (758)
T ss_dssp CEEEEEECTTS-CEEEEETTCSS-EEEEETTT--------T---EEEEECTTTSCGGGCEEEEEECTTSC-EE-EEETTE
T ss_pred eeeeEEEcCCC-CEEEEccCCCC-cEEEeCCC--------C---ceEEecCCCcCCCcccceEEECCCCC-EE-EEecCc
Confidence 47788877777 4554 345444 66778754 1 1222211 123567777777776 44 445544
Q ss_pred cEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeeccCCCeeEEE
Q 020480 202 QICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVAHQSEVGVSI 280 (325)
Q Consensus 202 ~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~i~ 280 (325)
+..+|....... ... ..+ ....|.++... ++ ++. .++..| |..||..+.+ +..+......+....
T Consensus 538 -l~~~~~~~~~~~----~~~-~~gl~~~~i~~i~~~-~g-~lW-i~t~~G-l~~~~~~~~~----~~~~~~~~~~~~~~~ 603 (758)
T 3ott_A 538 -VMRINPKDESQQ----SIS-FGSFSNNEILSMTCV-KN-SIW-VSTTNG-LWIIDRKTMD----ARQQNMTNKRFTSLL 603 (758)
T ss_dssp -EEEECC--CCCC----BCC-CCC---CCEEEEEEE-TT-EEE-EEESSC-EEEEETTTCC----EEEC--CCCCCSEEE
T ss_pred -eEEEecCCCceE----Eec-ccCCCccceEEEEEC-CC-CEE-EECCCC-eEEEcCCCce----eEEecCCCCceeeeE
Confidence 788887654321 110 111 12457777654 44 444 445555 7778887654 333221122333333
Q ss_pred e-CCCCCc-cCCCCceEEee
Q 020480 281 L-NASFRL-SHEDTCTCTHR 298 (325)
Q Consensus 281 ~-~p~~~~-~~~~d~~~~~~ 298 (325)
+ .++|.+ .|+..|.+.+.
T Consensus 604 ~~~~~G~l~fG~~~Gl~~f~ 623 (758)
T 3ott_A 604 FDPKEDCVYLGGADGFGISH 623 (758)
T ss_dssp EETTTTEEEEECBSEEEEEE
T ss_pred EECCCCcEEEecCCceEEEC
Confidence 3 457775 66666666654
No 349
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=28.10 E-value=2.4e+02 Score=22.74 Aligned_cols=16 Identities=6% Similarity=0.173 Sum_probs=11.6
Q ss_pred EEEEEecCCeEEEEeCCC
Q 020480 140 LIATKTVSAEVYVFDYSK 157 (325)
Q Consensus 140 ~la~g~~dg~v~vwd~~~ 157 (325)
+++.|+ ..+..||...
T Consensus 7 l~~~GG--~~~~~yd~~~ 22 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAA 22 (315)
T ss_dssp EEEEET--TEEEEEETTT
T ss_pred EEEEcC--CceEEECCCC
Confidence 555666 5788999876
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=28.08 E-value=2.5e+02 Score=22.96 Aligned_cols=103 Identities=6% Similarity=0.060 Sum_probs=0.0
Q ss_pred EEEecCCCCcEEEEE---ecCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEecCCCCCeEEEEeCCCcEEEE
Q 020480 130 RARYMPQNPFLIATK---TVSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWSKFKEGHLLSGSDDAQICLW 206 (325)
Q Consensus 130 ~v~~~~~~~~~la~g---~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~p~~~~~l~s~s~dg~i~iw 206 (325)
+..|++++..+..+- .....|..-++.. .....+..+.. ..+++.+..+..+......|.+-
T Consensus 108 ~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-----------s~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~ 172 (302)
T 3s25_A 108 CIYASLIGNYIYYLHYDTQTATSLYRIRIDG-----------EEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRY 172 (302)
T ss_dssp EEEEEEETTEEEEEEESSSSCEEEEEEETTS-----------CCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEE
T ss_pred ccEEEEeCCEEEEEeecCCCCceEEEEECCC-----------CCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEE
Q ss_pred eCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEcc
Q 020480 207 DINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLR 258 (325)
Q Consensus 207 d~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~ 258 (325)
++... .....+.+.. ...++|++..++.+-..++ -+|+-+.
T Consensus 173 ~l~g~------~~~~l~~~~~----~~~~~P~g~~iy~t~~~~~-~~I~~~~ 213 (302)
T 3s25_A 173 DTASQ------SEALFYDCNC----YKPVVLDDTNVYYMDVNRD-NAIVHVN 213 (302)
T ss_dssp ETTTT------EEEEEECSCE----EEEEEEETTEEEEEEGGGT-TEEEEEC
T ss_pred ECCCC------CEEEEeCCCc----cceeeecCCEEEEEEcCCC-cEEEEEE
No 351
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=27.53 E-value=3.8e+02 Score=24.98 Aligned_cols=139 Identities=11% Similarity=0.076 Sum_probs=73.8
Q ss_pred CCeeEEEecCCCCcEEEEEecCCeEEEEeCCCCCCCCCCCCCCCCcEEEe--c----CCCceEEEEecCCCCCeEEEEeC
Q 020480 126 GEVNRARYMPQNPFLIATKTVSAEVYVFDYSKHPSKPPLDGACSPDLRLR--G----HSTEGYGLSWSKFKEGHLLSGSD 199 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~--~----h~~~v~~l~~~p~~~~~l~s~s~ 199 (325)
..|.++....++ .+.+ |+..| |..++... +. ...+. . ....|.++...+++. .|-.|+.
T Consensus 146 ~~i~~i~~d~~g-~lWi-gt~~G-l~~~~~~~--------~~---~~~~~~~~~~~~~~~~i~~i~~d~~~~-~lWigt~ 210 (758)
T 3ott_A 146 NTIYSIIRTKDN-QIYV-GTYNG-LCRYIPSN--------GK---FEGIPLPVHSSQSNLFVNSLLEDTTRQ-CVWIGTE 210 (758)
T ss_dssp SCEEEEEECTTC-CEEE-EETTE-EEEEETTT--------TE---EEEECCCCCTTCSSCCEEEEEEETTTT-EEEEEEE
T ss_pred CeEEEEEEcCCC-CEEE-EeCCC-HhhCccCC--------Cc---eEEecCCCccccccceeEEEEEECCCC-EEEEEEC
Confidence 356677766666 3443 45544 66677654 11 11111 0 122478888777655 3444443
Q ss_pred CCcEEEEeCCCCCCCCcccceEeeecCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeEeec--------
Q 020480 200 DAQICLWDINAAPKNKSLEAMQIFKVHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQSVVA-------- 271 (325)
Q Consensus 200 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------- 271 (325)
+-+..+|...... .....+ ....|.++....++ .+. .|+. +-+.+++..+.. +..+..
T Consensus 211 -~Gl~~~~~~~~~~----~~~~~l--~~~~i~~i~~d~~g-~lW-igT~-~Gl~~~~~~~~~----~~~~~~~~~~~~~l 276 (758)
T 3ott_A 211 -GYLFQYFPSTGQI----KQTEAF--HNNSIKSLALDGNG-DLL-AGTD-NGLYVYHNDTTP----LQHIIHDSRNIQSL 276 (758)
T ss_dssp -EEEEEEETTTTEE----EEEEEE--EEEEEEEEEECTTC-CEE-EEET-TEEEEECCTTSC----CEEECCCTTCTTSC
T ss_pred -CCCeEEcCCCCeE----EeccCC--CCCeEEEEEEcCCC-CEE-EEeC-CceeEEecCCCc----EEEEEcCCCCcCcC
Confidence 4577888765421 111111 23457788777666 344 4554 457788876654 222211
Q ss_pred cCCCeeEEEeCCCCCc-cCCCCc
Q 020480 272 HQSEVGVSILNASFRL-SHEDTC 293 (325)
Q Consensus 272 h~~~v~~i~~~p~~~~-~~~~d~ 293 (325)
....|.++..+.+|.+ .|...+
T Consensus 277 ~~~~i~~i~~D~~g~lWiGT~~G 299 (758)
T 3ott_A 277 TNNIIWNIFADQEHNIWLGTDYG 299 (758)
T ss_dssp SCSCEEEEEECTTCCEEEEESSS
T ss_pred CcCeEEEEEEcCCCCEEEEeCCc
Confidence 1235888888888876 443333
No 352
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=26.52 E-value=5e+02 Score=26.06 Aligned_cols=86 Identities=13% Similarity=0.090 Sum_probs=53.2
Q ss_pred ceEEEEEeccCCCeeEEEecCCC-----CcEEEEEec-CCeEEEEeCCCCCCCCCCCCCCCCcEEEe-cCCCceEEEEec
Q 020480 115 KVQIIQQINHDGEVNRARYMPQN-----PFLIATKTV-SAEVYVFDYSKHPSKPPLDGACSPDLRLR-GHSTEGYGLSWS 187 (325)
Q Consensus 115 ~~~~~~~~~h~~~v~~v~~~~~~-----~~~la~g~~-dg~v~vwd~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~~ 187 (325)
.+...........|.|+++.|.. ..++|+|.. |++|+|+++.. ...+.... +-.....++.+.
T Consensus 543 ~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~----------l~~~~~~~L~~~~~p~si~l~ 612 (1158)
T 3ei3_A 543 ELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS----------FELLHKEMLGGEIIPRSILMT 612 (1158)
T ss_dssp EEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT----------CCEEEEEECCSSCCEEEEEEE
T ss_pred ceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC----------CCeEEEEECCCCCCCcEEEEE
Confidence 44444555567889999998643 368999986 99999999976 22222111 111233344332
Q ss_pred C-CCCCeEEEEeCCCcEEEEeCCC
Q 020480 188 K-FKEGHLLSGSDDAQICLWDINA 210 (325)
Q Consensus 188 p-~~~~~l~s~s~dg~i~iwd~~~ 210 (325)
. .+..+|..|-.||.+..+.+..
T Consensus 613 ~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 613 TFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp EETTEEEEEEEETTSEEEEEEECT
T ss_pred EeCCCcEEEEEeCCCeEEEEEEcC
Confidence 1 1233788888999987666543
No 353
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.81 E-value=55 Score=32.84 Aligned_cols=30 Identities=13% Similarity=0.051 Sum_probs=24.0
Q ss_pred eEEEEecCCCCCeEEEEeCCCcEEEEeCCCC
Q 020480 181 GYGLSWSKFKEGHLLSGSDDAQICLWDINAA 211 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~ 211 (325)
+.+++..++.. ++++-+.|+++|+|++.++
T Consensus 240 ~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~ 269 (1139)
T 4fhn_B 240 IISMIFLSTYN-VLVMLSLDYKLKVLDLSTN 269 (1139)
T ss_dssp BSCCEEETTTT-EEEEEBTTCEEEEEETTTT
T ss_pred eEEeeccCCcc-EEEEEeCCCEEEEEECCCC
Confidence 34455556666 8999999999999999887
No 354
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=24.95 E-value=48 Score=33.26 Aligned_cols=33 Identities=15% Similarity=0.106 Sum_probs=25.5
Q ss_pred cEEEEEeecCCCcEEEEEecCCcEEEEEccCCCC
Q 020480 229 VVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 229 ~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
.+.+++..++. .++++-+.|+.+|||++.++.+
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCe
Confidence 34455556654 6888999999999999998764
No 355
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=23.41 E-value=3.4e+02 Score=23.02 Aligned_cols=140 Identities=11% Similarity=0.173 Sum_probs=78.6
Q ss_pred CCeeEEEecCCCCcEEEEEe------cCCeEEEEeCCCCCCCCCCCCCCCCcEEEecCCCceEEEEec--CCCCCeEEEE
Q 020480 126 GEVNRARYMPQNPFLIATKT------VSAEVYVFDYSKHPSKPPLDGACSPDLRLRGHSTEGYGLSWS--KFKEGHLLSG 197 (325)
Q Consensus 126 ~~v~~v~~~~~~~~~la~g~------~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~--p~~~~~l~s~ 197 (325)
..|-.-+.+++...++++|- -.|.+.+|+.+. +....+.||......+... +....+++.+
T Consensus 152 ~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-----------~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa 220 (365)
T 2xzh_A 152 CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-----------KVSQPIEGHAASFAQFKMEGNAEESTLFCFA 220 (365)
T ss_dssp CEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-----------TEEEEECCSEEEEEEECCTTCSSCEEEEEEE
T ss_pred ceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-----------cccceeeeeeeeeEEEecCCCCCCceEEEEE
Confidence 34444455566533333432 347889999876 4456678886554444332 1112234444
Q ss_pred eCC---CcEEEEeCCCCC-CCCc--ccceEeee---cCCccEEEEEeecCCCcEEEEEecCCcEEEEEccCCCCCCCeeE
Q 020480 198 SDD---AQICLWDINAAP-KNKS--LEAMQIFK---VHEGVVEDVAWHLRHEYLFGSVGDDQYLLIWDLRTPSVSKPVQS 268 (325)
Q Consensus 198 s~d---g~i~iwd~~~~~-~~~~--~~~~~~~~---~~~~~v~~v~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 268 (325)
... +.++|-++.... .... .+.+..+. +...--.++..++.. .++..-+.-|.|++||+.++.+ +..
T Consensus 221 ~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviTK~G~ihlyDleTgt~---i~~ 296 (365)
T 2xzh_A 221 VRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKYGYIHLYDLETGTC---IYM 296 (365)
T ss_dssp EEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEETTSEEEEEETTTCCE---EEE
T ss_pred EecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC-CEEEEEeCCcEEEEEEcccCcE---EEE
Confidence 432 589999985541 1110 01111111 123445567778765 5788889999999999999985 555
Q ss_pred eeccCCCeeEEE
Q 020480 269 VVAHQSEVGVSI 280 (325)
Q Consensus 269 ~~~h~~~v~~i~ 280 (325)
-.-...+|..-+
T Consensus 297 nrIS~d~iF~ta 308 (365)
T 2xzh_A 297 NRISGETIFVTA 308 (365)
T ss_dssp EECCSSCEEEEE
T ss_pred eccCCCceEEec
Confidence 444445554333
No 356
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=21.54 E-value=4.6e+02 Score=24.01 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=36.0
Q ss_pred eEEEEecCCCCCeEEEEeCC------------CcEEEEeCCCCCCCCcccceEeeec-CCccEEEEEeecCCCcEEEEEe
Q 020480 181 GYGLSWSKFKEGHLLSGSDD------------AQICLWDINAAPKNKSLEAMQIFKV-HEGVVEDVAWHLRHEYLFGSVG 247 (325)
Q Consensus 181 v~~l~~~p~~~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~s~~ 247 (325)
.=-|.|+|.+. +++.-..+ ..+.+.+...+. ..+.+.+ ..+.++.++|+|++..+|+..-
T Consensus 478 PDNL~fd~~G~-LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~------~~rf~~~P~gaE~TG~~fspDg~tlfvniQ 550 (592)
T 3zwu_A 478 PDGLGFDKAGR-LWILTDGDSSNAGDFAGMGNNQMLCADPATGE------IRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp EEEEEECTTCC-EEEEECCCCCCSGGGTTTCSCEEEEECTTTCC------EEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CcceEECCCCC-EEEEecCCCcccccccccccceEEEEeCCCCe------EEEEEeCCCCccCcCeeECCCCCEEEEEEE
Confidence 35688999987 66654432 234444544432 2222222 4578999999999876665543
No 357
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=21.35 E-value=1.6e+02 Score=27.85 Aligned_cols=30 Identities=10% Similarity=0.223 Sum_probs=23.6
Q ss_pred ceEEEEecCCCCCeEEEEeCCCcEEEEeCCCCC
Q 020480 180 EGYGLSWSKFKEGHLLSGSDDAQICLWDINAAP 212 (325)
Q Consensus 180 ~v~~l~~~p~~~~~l~s~s~dg~i~iwd~~~~~ 212 (325)
.|.++.+. .. ++++-+.|..+|+|+++++.
T Consensus 223 ~Is~~~~~--~~-fLftL~~Dh~LRiWsL~t~~ 252 (729)
T 3f7f_A 223 VISCKLFH--ER-YLIVLTQNCHLKIWDLTSFT 252 (729)
T ss_dssp EEEEEEET--TT-EEEEEETTCEEEEEETTTTE
T ss_pred eEEEeccC--Cc-EEEEEEcCCeEEEEEcCCCc
Confidence 45555553 44 89999999999999999874
No 358
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=21.26 E-value=1.1e+02 Score=28.99 Aligned_cols=23 Identities=26% Similarity=0.394 Sum_probs=20.3
Q ss_pred CcEEEEEecCCcEEEEEccCCCC
Q 020480 240 EYLFGSVGDDQYLLIWDLRTPSV 262 (325)
Q Consensus 240 ~~~l~s~~~dg~i~iwd~~~~~~ 262 (325)
..++++-+.|..+|+|+++++.+
T Consensus 231 ~~fLftL~~Dh~LRiWsL~t~~l 253 (729)
T 3f7f_A 231 ERYLIVLTQNCHLKIWDLTSFTL 253 (729)
T ss_dssp TTEEEEEETTCEEEEEETTTTEE
T ss_pred CcEEEEEEcCCeEEEEEcCCCce
Confidence 36889999999999999999873
No 359
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=20.12 E-value=3.4e+02 Score=21.76 Aligned_cols=21 Identities=10% Similarity=0.316 Sum_probs=14.2
Q ss_pred cEEEEEec------CCcEEEEEccCCC
Q 020480 241 YLFGSVGD------DQYLLIWDLRTPS 261 (325)
Q Consensus 241 ~~l~s~~~------dg~i~iwd~~~~~ 261 (325)
.+++.|+. -..+.+||+.+.+
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56677764 2358889987754
Done!