Query 020483
Match_columns 325
No_of_seqs 140 out of 412
Neff 5.5
Searched_HMMs 46136
Date Fri Mar 29 02:44:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020483.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020483hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2592 Tumor differentially e 100.0 7.7E-95 1.7E-99 699.6 17.3 300 21-322 72-426 (426)
2 PF03348 Serinc: Serine incorp 100.0 2E-89 4.3E-94 682.8 22.2 300 19-321 68-429 (429)
3 PF08426 ICE2: ICE2; InterPro 81.7 11 0.00023 38.5 9.7 95 86-185 128-224 (412)
4 PF13334 DUF4094: Domain of un 43.0 24 0.00051 28.8 2.7 22 258-279 6-29 (95)
5 PF08409 DUF1736: Domain of un 26.4 1.4E+02 0.0031 23.6 4.6 38 285-322 15-53 (80)
6 KOG4662 NADH dehydrogenase sub 21.5 77 0.0017 27.2 2.3 59 37-98 48-116 (122)
7 PF03904 DUF334: Domain of unk 18.8 2.7E+02 0.0059 26.4 5.5 28 107-134 197-224 (230)
8 PF07787 DUF1625: Protein of u 11.2 1.1E+03 0.024 21.8 7.7 63 71-135 184-247 (248)
9 PF07172 GRP: Glycine rich pro 10.8 3.1E+02 0.0068 22.3 3.3 22 209-230 5-26 (95)
10 PF10669 Phage_Gp23: Protein g 9.7 4.3E+02 0.0092 22.1 3.6 26 74-99 17-42 (121)
No 1
>KOG2592 consensus Tumor differentially expressed (TDE) protein [Function unknown]
Probab=100.00 E-value=7.7e-95 Score=699.62 Aligned_cols=300 Identities=28% Similarity=0.581 Sum_probs=270.7
Q ss_pred ccchhhhhhhhhcccc-------------CCCCCCcccc-ccceeeeeehhcc---cccccccccch---hhhhHHHHHH
Q 020483 21 DQGFMALWMVVCKDCP-------------LDCLDNHPIS-SSFFLYSTLWGDC---SFWCRVSLIPI---MFSCLRNMVF 80 (325)
Q Consensus 21 ~~~~~a~~~~~~~~c~-------------~~~~~~~~~q-~~~f~k~~l~~~~---~FF~~~~~i~~---~i~~~Ga~lF 80 (325)
-+|+.|++|++|++-+ -..|+|+.+| |.||+|+++|+.. +||.|++.+.. |+|++||++|
T Consensus 72 ~~gy~AVyR~~f~~a~Ff~~lsllm~gVkss~D~R~~iqng~W~fK~i~~~~l~i~~FfIP~~~~~~~~~~v~~~Ga~~F 151 (426)
T KOG2592|consen 72 LLGYKAVYRLCFGLACFFLLLSLLMIGVKSSKDPRAAIQNGFWFFKFILWFGLIVGSFFIPNGFFISFWFYVSVFGAALF 151 (426)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHhcCcCCCHHHHHHcCcHHHHHHHHHHHHHheEEcCCccchhHHHHHHHHhHHHH
Confidence 5899999999988755 5678888899 5599999999865 99999975543 9999999999
Q ss_pred HHHHHHHHHHHHHHHhHHhhcC-cCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCchhHHHHHHHHHHHHHHhh
Q 020483 81 LLIQLISVISFITWLNDCCLSE-KNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQLMTS 159 (325)
Q Consensus 81 IliQLIlLVDFAh~WNe~Wv~~-~~~~~w~~~Ll~~T~~~Y~~si~~~vlmy~~ft~~~gC~lN~~fIt~nliL~vi~sv 159 (325)
||+||||||||||+|||+|++| ||++.||++|+++|+++|+++++++++||+|||+++||++||+||++|+++|+++++
T Consensus 152 ILvqLvLLvDFaH~w~e~wv~~~Edsr~wy~~Ll~~T~~~Y~~s~~~~~l~fv~ft~~~~C~~nk~fi~~nlilcv~~si 231 (426)
T KOG2592|consen 152 ILVQLVLLVDFAHSWNESWVEKVEDSRFWYAALLGVTLLMYLLSLVATVLLFVYFTPGDGCGENKFFISVNLILCVAISI 231 (426)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHhheEecCCCCCCcceEEEeechHHHHHHHH
Confidence 9999999999999999999998 778899999999999999999999999999999999999999999999999999999
Q ss_pred hhcccccc-----cccCcchhHHHHHHhhhhhhhhcCCCCCCCCCCcccC-------------CCCchhHHHHHHHHHHH
Q 020483 160 VSLHPKIN-----SGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRKAEAS-------------NKTDWLTIISFVVALLA 221 (325)
Q Consensus 160 iSi~p~v~-----~gLLqSsiVs~Y~~YLt~SAlsseP~d~~CNp~~~~~-------------~~~~~~~iig~i~~~~~ 221 (325)
+|+||++| +||||||+|++|+||||||||+||| |++|||...+. ...+.++++|+++++++
T Consensus 232 ~sv~P~VQe~~P~SGLlQSsvIs~Y~~YLt~SAlss~P-e~~CNP~~~~~~~~t~~~~~~~~~~~~~~~~iiGli~~~lc 310 (426)
T KOG2592|consen 232 LSVHPKVQEGQPRSGLLQSSVISLYTMYLTWSALSSEP-ENGCNPWLNSSKNVTITVGPGASVSTFDATNIIGLIFLLLC 310 (426)
T ss_pred HhcChhhhcCCCCcccchhHHHHHHHHHHHHHHHhcCC-ccccChhhhcccccccccCcccccccccccchHHHHHHHHH
Confidence 99999887 8999999999999999999999999 99999974322 12355789999999999
Q ss_pred HHhhhcccCcccccccc--------------C--CCCCCCCCCcCccchhHHHHHHHHHHHHHHhhcCCCCCCCCcceee
Q 020483 222 IVIATFSTGIDSQCFQL--------------R--KSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNTHHTIRKWTI 285 (325)
Q Consensus 222 i~ys~~rt~~~~~~~~~--------------~--~~~d~e~~~v~YsYsfFH~vf~LaSmY~aMllTnW~~~~~~~~~~i 285 (325)
++|++.|++++++.... . ++.|+|+|+|.|+|+|||++|+|||+|+||+||||++++++- +.+
T Consensus 311 ilYsalR~~s~~~l~k~~~~~~e~~~l~~~dG~~~~~d~Ek~GV~YsYsfFHfvf~LASlyvmmtLTnW~~~~~~~-~~v 389 (426)
T KOG2592|consen 311 ILYSALRASSRTQLRKLTRSNEEEPLLPDEDGGGRANDNEKDGVTYSYSFFHFVFVLASLYVMMTLTNWYTPDEDI-WFV 389 (426)
T ss_pred HHHHHhhccccccccccccccccccCccCCCCCcccccccCCCeeEeeeHHHHHHHHHHHHHHHHhccccCCCCce-eEE
Confidence 99999999887765310 0 235678889999999999999999999999999999998443 789
Q ss_pred ecCceehhhhhHHHHHHHHHHHHHhhhcccccCCCCC
Q 020483 286 DVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRAA 322 (325)
Q Consensus 286 ~~gw~s~WVKi~SsW~c~~LY~WtLvAP~v~pdRdF~ 322 (325)
+.+|+++||||+|+|+|.+||+||||||+++|||||+
T Consensus 390 ~~~w~~vWVKI~ssWic~~LY~WTlVAPli~p~Rdf~ 426 (426)
T KOG2592|consen 390 KSSWASVWVKIVSSWICSGLYLWTLVAPLILPDRDFS 426 (426)
T ss_pred eccchHHHHHHHHHHHHHHHHHHHHhhhhhccccccC
Confidence 9999999999999999999999999999999999996
No 2
>PF03348 Serinc: Serine incorporator (Serinc); InterPro: IPR005016 This is a family of proteins which display differential expression in various tumour and cell lines. The function of these proteins is unknown. ; GO: 0016020 membrane
Probab=100.00 E-value=2e-89 Score=682.81 Aligned_cols=300 Identities=31% Similarity=0.614 Sum_probs=266.3
Q ss_pred hhccchhhhhhhhhcccc-------------CCCCCCcccc-ccceeeeeehhcc---cccccc-cccch--hhhhHHHH
Q 020483 19 ARDQGFMALWMVVCKDCP-------------LDCLDNHPIS-SSFFLYSTLWGDC---SFWCRV-SLIPI--MFSCLRNM 78 (325)
Q Consensus 19 ~~~~~~~a~~~~~~~~c~-------------~~~~~~~~~q-~~~f~k~~l~~~~---~FF~~~-~~i~~--~i~~~Ga~ 78 (325)
.+-+|+.|++|++|.... -..|+|+.+| |.|++|+.+|+.. +||.|+ .+++. |+|++||+
T Consensus 68 ~~c~G~~aVyRvsfal~~Ff~l~~l~~i~v~~~~d~Ra~ihng~W~~K~l~l~~l~v~~FfiP~~~f~~~~~~v~~~ga~ 147 (429)
T PF03348_consen 68 DSCVGYSAVYRVSFALALFFFLMALLTIGVKSSRDPRAAIHNGFWFLKFLLLIGLIVGAFFIPNGSFINVYMYVARVGAF 147 (429)
T ss_pred HHhhhhHHHHHHHHHHHHHHHHHHHHHhhcCCCccHHHHHHHhhHHHHHHHHHHHHheeEEeCchHHHHHHHHHHHHHHH
Confidence 467899999999988665 4556777788 5588899998865 999999 55555 89999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHhhcCc---CCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCchhHHHHHHHHHHHH
Q 020483 79 VFLLIQLISVISFITWLNDCCLSEK---NAERCHIHVMLIATVAYIICIVGIIMMYIWYTPDPTCLLNIFFITWTLVLLQ 155 (325)
Q Consensus 79 lFIliQLIlLVDFAh~WNe~Wv~~~---~~~~w~~~Ll~~T~~~Y~~si~~~vlmy~~ft~~~gC~lN~~fIt~nliL~v 155 (325)
+||+||||+||||||+|||+|++|. ++++|+.+|+++|+++|+++++++++||++|+ ++||.+||+||++|++||+
T Consensus 148 ~FiliQlIlLvDFah~wne~w~~~~e~~~s~~w~~~Li~~T~~~y~~si~~~v~~y~~f~-~~~C~lN~~fIt~nliL~v 226 (429)
T PF03348_consen 148 IFILIQLILLVDFAHSWNESWVEKAEEGNSKRWYIALIGVTLLFYAASIAGIVLMYVFFT-PSGCSLNKFFITFNLILCV 226 (429)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccccccCceehhHHHHHHHHHHHHHHHHHHHHHHHhC-CCCCchhHHHHHHHHHHHH
Confidence 9999999999999999999999982 24789999999999999999999999999999 7799999999999999999
Q ss_pred HHhhhhccccc-----ccccCcchhHHHHHHhhhhhhhhcCCCCCCCCCC-cccCCCCchhHHHHHHHHHHHHHhhhccc
Q 020483 156 LMTSVSLHPKI-----NSGFLAPGLMGLYIIFLCWCAIRSEPAGETCNRK-AEASNKTDWLTIISFVVALLAIVIATFST 229 (325)
Q Consensus 156 i~sviSi~p~v-----~~gLLqSsiVs~Y~~YLt~SAlsseP~d~~CNp~-~~~~~~~~~~~iig~i~~~~~i~ys~~rt 229 (325)
+++++|++||| ++||||||+|++|+||||||||+||| |++|||. .++.+..++++++|+++++++++|+++||
T Consensus 227 i~s~lSv~p~Vqe~~p~sgLLqssvv~~Y~~yL~~SAlss~P-~~~CNp~~~~~~~~~~~~~iig~i~~~~~v~yss~ra 305 (429)
T PF03348_consen 227 IISVLSVLPKVQEANPRSGLLQSSVVSLYTTYLTWSALSSEP-DKECNPSGSRSGSWNTWQSIIGLIFTFVSVLYSSFRA 305 (429)
T ss_pred HHHHHHhhhhhhhcCCCcccccHHHHHHHHHHHHHHHHHcCC-CcccCCcccccCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 99999999987 57999999999999999999999999 9999998 45555678899999999999999999999
Q ss_pred Ccccccc------c------------c---------------CCCCCCCCCCcCccchhHHHHHHHHHHHHHHhhcCCCC
Q 020483 230 GIDSQCF------Q------------L---------------RKSESPAEDDVPYGYGFFHFVFATGAMYFAMLLIGWNT 276 (325)
Q Consensus 230 ~~~~~~~------~------------~---------------~~~~d~e~~~v~YsYsfFH~vf~LaSmY~aMllTnW~~ 276 (325)
+++++.. + . ++.+|||+++++|||+|||++|+|||||+||++|||++
T Consensus 306 ~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~d~e~~~~~y~y~~FH~vf~las~Y~am~lTnW~~ 385 (429)
T PF03348_consen 306 SSSSQVGKLQLSSDSEGEQPKCCFNEDRDQADRADVEEGSLPQSVIDDEEDGVSYSYSFFHFVFALASMYVAMLLTNWYS 385 (429)
T ss_pred ccccchhhhhccCccccccCccccccccccccccchhccccCcccccccccCCcccHHHHHHHHHHHHHHHHHHhccccC
Confidence 9877621 0 0 00124566779999999999999999999999999999
Q ss_pred CCCCcceeeecCceehhhhhHHHHHHHHHHHHHhhhcccccCCCC
Q 020483 277 HHTIRKWTIDVGWTSTWVRIVNEWLAVCVYLWMLVAPVILKSSRA 321 (325)
Q Consensus 277 ~~~~~~~~i~~gw~s~WVKi~SsW~c~~LY~WtLvAP~v~pdRdF 321 (325)
++ ++.+.++.||+++||||+|+|+|++||+||||||+++|||||
T Consensus 386 ~~-~~~~~~~~~~~~~Wvki~s~W~~~~LY~WtLvAP~~~p~RdF 429 (429)
T PF03348_consen 386 PD-ADFETVGSGWASVWVKIASSWVCLLLYIWTLVAPLLFPDRDF 429 (429)
T ss_pred Cc-cccccccCCcceehHHHHHHHHHHHHHHHHHHHHHhcCCCCC
Confidence 94 344588999999999999999999999999999999999998
No 3
>PF08426 ICE2: ICE2; InterPro: IPR013635 ICE2 is a fungal ER protein which has been shown to play an important role in forming/maintaining the cortical ER []. It has also been identified as a protein which is necessary for nuclear inner membrane targeting [].
Probab=81.67 E-value=11 Score=38.54 Aligned_cols=95 Identities=14% Similarity=0.151 Sum_probs=71.2
Q ss_pred HHHHHHHHHHhHHhhcC-cCCchhHHHHHHHHHHHHHHHHHHHHhhhhhccCC-CCCchhHHHHHHHHHHHHHHhhhhcc
Q 020483 86 ISVISFITWLNDCCLSE-KNAERCHIHVMLIATVAYIICIVGIIMMYIWYTPD-PTCLLNIFFITWTLVLLQLMTSVSLH 163 (325)
Q Consensus 86 IlLVDFAh~WNe~Wv~~-~~~~~w~~~Ll~~T~~~Y~~si~~~vlmy~~ft~~-~gC~lN~~fIt~nliL~vi~sviSi~ 163 (325)
+|+|-=+=+-++ |+.+ +.++.|...++..+...|+.|+- ++|--|+-| +-=..+...|++.+-+.+.+++.-+.
T Consensus 128 LLvIQa~Gq~~r-WLv~~~rSd~W~I~~Li~Sg~vit~s~Y---fLyRIy~fp~~is~~~AtLiG~~lT~~~~L~~~GI~ 203 (412)
T PF08426_consen 128 LLVIQAAGQTSR-WLVNRGRSDSWMIVSLIASGSVITASLY---FLYRIYVFPWTISNLDATLIGVTLTSVVFLGLYGIV 203 (412)
T ss_pred HHHHHHHhHHHH-HHHhcCCCchhHHHHHHHHHHHHHHHHH---HHHHhhccccccCcccHHHHHHHHHHHHHHHHheee
Confidence 344555566665 8754 35778998888888877777653 455555544 34568899999999999998888887
Q ss_pred cccccccCcchhHHHHHHhhhh
Q 020483 164 PKINSGFLAPGLMGLYIIFLCW 185 (325)
Q Consensus 164 p~v~~gLLqSsiVs~Y~~YLt~ 185 (325)
.-|++...||.+.+|++|=.|
T Consensus 204 -sgrGn~iESSLlFAYiV~cIY 224 (412)
T PF08426_consen 204 -SGRGNVIESSLLFAYIVRCIY 224 (412)
T ss_pred -cCCCcHHHHHHHHHHHHHHHH
Confidence 678999999999999877666
No 4
>PF13334 DUF4094: Domain of unknown function (DUF4094)
Probab=42.96 E-value=24 Score=28.83 Aligned_cols=22 Identities=14% Similarity=0.489 Sum_probs=18.8
Q ss_pred HHHHHHHHHHHHhhcC--CCCCCC
Q 020483 258 FVFATGAMYFAMLLIG--WNTHHT 279 (325)
Q Consensus 258 ~vf~LaSmY~aMllTn--W~~~~~ 279 (325)
++++++|+.+.|++|| |..|+.
T Consensus 6 l~Lc~~SF~~G~lft~R~W~~pe~ 29 (95)
T PF13334_consen 6 LLLCIASFCAGMLFTNRMWTVPES 29 (95)
T ss_pred HHHHHHHHHHHHHHhcccccCCcc
Confidence 5899999999999999 976643
No 5
>PF08409 DUF1736: Domain of unknown function (DUF1736); InterPro: IPR013618 This domain of unknown function is found in various hypothetical metazoan proteins.
Probab=26.36 E-value=1.4e+02 Score=23.61 Aligned_cols=38 Identities=16% Similarity=0.087 Sum_probs=30.4
Q ss_pred eecCceehhhhhHHHHHHHHHHHHHhhhcc-cccCCCCC
Q 020483 285 IDVGWTSTWVRIVNEWLAVCVYLWMLVAPV-ILKSSRAA 322 (325)
Q Consensus 285 i~~gw~s~WVKi~SsW~c~~LY~WtLvAP~-v~pdRdF~ 322 (325)
....-.+.+.|..+----..+|.|-|+.|. ++.|-.++
T Consensus 15 Paa~~~~~~tR~LT~~yl~~~n~~LLl~P~~L~~DWSm~ 53 (80)
T PF08409_consen 15 PAAFAPSLLTRWLTYNYLPAFNLWLLLFPSWLCFDWSMG 53 (80)
T ss_pred CcccCCcHHHHHHHHHHHHHHHHHHHHCccccCCcCCCC
Confidence 334455799999999999999999999998 57776554
No 6
>KOG4662 consensus NADH dehydrogenase subunit 3 and related proteins [Energy production and conversion]
Probab=21.52 E-value=77 Score=27.19 Aligned_cols=59 Identities=17% Similarity=0.202 Sum_probs=32.3
Q ss_pred CCCCCCcccc--ccceeeeeehhcc----cccccccccch---hhhh-HHHHHHHHHHHHHHHHHHHHHhHH
Q 020483 37 LDCLDNHPIS--SSFFLYSTLWGDC----SFWCRVSLIPI---MFSC-LRNMVFLLIQLISVISFITWLNDC 98 (325)
Q Consensus 37 ~~~~~~~~~q--~~~f~k~~l~~~~----~FF~~~~~i~~---~i~~-~Ga~lFIliQLIlLVDFAh~WNe~ 98 (325)
.|+.+.++.+ .++|..-++|... .++.|.-+.+. +.+. +=+++||+ ++.+.+.|.|+|.
T Consensus 48 FdP~~~arlpFsirfflvaI~FliFDLEi~~~lp~~l~~d~~~~~~~~~~~fifIl---il~~Gl~~ew~~g 116 (122)
T KOG4662|consen 48 FDPLGDARLPFSIRFFLVAITFLIFDLEIVLLLPGALPQDMSGLHPFGIMAFIFIL---ILKIGLYYEWSEG 116 (122)
T ss_pred CCcCccccCchhhHHHHHHHHHHHHhhHHHhhCccccchhhccccHHHHHHHHHHH---HHHHHHHHHHHhc
Confidence 4444433333 4455544455543 56665443333 3333 44555654 5778999999984
No 7
>PF03904 DUF334: Domain of unknown function (DUF334); InterPro: IPR005602 This is a family of proteins found in Staphylococcus aureus plasmid with no characterised function.
Probab=18.78 E-value=2.7e+02 Score=26.43 Aligned_cols=28 Identities=25% Similarity=0.336 Sum_probs=21.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhhhc
Q 020483 107 RCHIHVMLIATVAYIICIVGIIMMYIWY 134 (325)
Q Consensus 107 ~w~~~Ll~~T~~~Y~~si~~~vlmy~~f 134 (325)
.|...-.++=.+=|+.+|.+.+.+|-|-
T Consensus 197 ~~~~lwyi~Y~vPY~~~ig~~i~l~~~~ 224 (230)
T PF03904_consen 197 FWTYLWYIAYLVPYIFAIGLFIYLYEWI 224 (230)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 5655556666677899999999888774
No 8
>PF07787 DUF1625: Protein of unknown function (DUF1625); InterPro: IPR012430 Sequences making up this family are derived from hypothetical proteins expressed by both prokaryotic and eukaryotic species. The region in question is approximately 250 residues long.
Probab=11.17 E-value=1.1e+03 Score=21.80 Aligned_cols=63 Identities=11% Similarity=0.256 Sum_probs=35.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhHHhhcC-cCCchhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Q 020483 71 MFSCLRNMVFLLIQLISVISFITWLNDCCLSE-KNAERCHIHVMLIATVAYIICIVGIIMMYIWYT 135 (325)
Q Consensus 71 ~i~~~Ga~lFIliQLIlLVDFAh~WNe~Wv~~-~~~~~w~~~Ll~~T~~~Y~~si~~~vlmy~~ft 135 (325)
|+-|++|.+-+.+++.++..-.+..-+ |+.= ++=.+....+ ..-++...++++.+++-.++|.
T Consensus 184 W~lR~~G~llmf~G~~~~~~~l~~l~~-~~P~lg~l~~~~~~~-~~~~~s~~lsl~~Ia~aW~~yR 247 (248)
T PF07787_consen 184 WILRFIGWLLMFIGFFLLFSPLYTLVD-WIPLLGNLVGFGLFL-VAFIISFSLSLLTIALAWLFYR 247 (248)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-hhceeechhhhHHHH-HHHHHHHHHHHHHHHHhheeeC
Confidence 788888888888888888887777754 5432 1111111111 1123344455555555555654
No 9
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=10.82 E-value=3.1e+02 Score=22.26 Aligned_cols=22 Identities=9% Similarity=0.283 Sum_probs=13.6
Q ss_pred hhHHHHHHHHHHHHHhhhcccC
Q 020483 209 WLTIISFVVALLAIVIATFSTG 230 (325)
Q Consensus 209 ~~~iig~i~~~~~i~ys~~rt~ 230 (325)
...+++++++.+.++-|..++.
T Consensus 5 ~~llL~l~LA~lLlisSevaa~ 26 (95)
T PF07172_consen 5 AFLLLGLLLAALLLISSEVAAR 26 (95)
T ss_pred HHHHHHHHHHHHHHHHhhhhhH
Confidence 3455777777766666666543
No 10
>PF10669 Phage_Gp23: Protein gp23 (Bacteriophage A118); InterPro: IPR018926 This entry is represented by the major tail subunit protein, Gp23 of Listeria phage A118 and prophage found in Bacilli. The function is currently unknown.
Probab=9.68 E-value=4.3e+02 Score=22.09 Aligned_cols=26 Identities=15% Similarity=0.262 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhHHh
Q 020483 74 CLRNMVFLLIQLISVISFITWLNDCC 99 (325)
Q Consensus 74 ~~Ga~lFIliQLIlLVDFAh~WNe~W 99 (325)
++.|++|+.+=+||||=-+.-|.++=
T Consensus 17 ~~FA~L~i~~FiILLIi~~~IW~~~r 42 (121)
T PF10669_consen 17 MFFAFLFIVVFIILLIITKSIWHDSR 42 (121)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 57789999999999999999998754
Done!