BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020484
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8LDQ4|TAP46_ARATH PP2A regulatory subunit TAP46 OS=Arabidopsis thaliana GN=TAP46 PE=1
SV=2
Length = 405
Score = 484 bits (1247), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/321 (72%), Positives = 276/321 (85%)
Query: 1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
MG ++ EE+PL LFE+ RKIH A+ESG D D V+KGCE+ +KCEDM+GKL LFSSNET
Sbjct: 1 MGGLAMEEMPLSVLFEQARKIHLAASESGVDQDVVKKGCEMFQKCEDMIGKLALFSSNET 60
Query: 61 KDDISTANLKYILVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELE 120
K+DIST NLKY+LVPY+L EL EKI Q+DR+QI+KAS AKLKEF SFCE MELVP+EELE
Sbjct: 61 KEDISTNNLKYLLVPYYLAELTEKIIQEDRIQIVKASYAKLKEFFSFCEAMELVPDEELE 120
Query: 121 AVAQAKPTAFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEED 180
A ++ A D+RA KIARFKRQ+AAE+KL EIKERKERRGRST+A+A S PVE+GE+D
Sbjct: 121 ASSRGGSGAPADRRALKIARFKRQKAAEAKLLEIKERKERRGRSTKASALSTPVESGEDD 180
Query: 181 VLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEEFSEVVLDE 240
+ DDD EEEREAWL++I+LA+CKA+DLLEMLK+EE+MLSA+KERQLK GE FS LD+
Sbjct: 181 IPDDDSEEEREAWLSSINLAICKAIDLLEMLKREEEMLSAIKERQLKDGEGGFSRDALDD 240
Query: 241 RSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLV 300
R+KKAE+WHRDAA R QY+KPAQPITCATFAQDVLEGRA VSQ HEHK+QP+IFGPAS+V
Sbjct: 241 RTKKAETWHRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIV 300
Query: 301 GGGLTSERERMAAQVFQPMHR 321
GG L++ERERM AQVFQP HR
Sbjct: 301 GGPLSTERERMIAQVFQPSHR 321
>sp|Q9Y7T1|YCJ5_SCHPO Uncharacterized protein C63.05 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC63.05 PE=3 SV=1
Length = 323
Score = 87.0 bits (214), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 122/265 (46%), Gaps = 38/265 (14%)
Query: 13 SLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYI 72
SL E + ++ S D + E EKC +V +L +FSSNE D+I T+ L+Y+
Sbjct: 5 SLRELWEETEKLKDSSSTDEKTRSEIVEGYEKCLKLVLQLRIFSSNEEVDEIKTSELRYL 64
Query: 73 LVPYFLGELIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTD 132
++ Y L + +E+ + DRL+ ++ ++ + F+S C+ L P + KP D
Sbjct: 65 MIDYELAKCVEQWTKGDRLKAVQYAKTHYETFLSICDDYGLKP------MQDEKPKTEAD 118
Query: 133 QRARKIARFKRQRAAESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREA 192
R KIAR++ ++ E +L+ A S E E E+ER+
Sbjct: 119 TRTLKIARYRMRQNLEKELK----------------ALSKDSETNE--------EQERKF 154
Query: 193 WLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGE--EEFSEVVLDERSKKAE--SW 248
WLT + +AV LD L ++ E D+L + +K + E+ E + E K+ E SW
Sbjct: 155 WLTKLQIAVEDTLDSLPHIEMEIDLLKRAQAELMKSEDSPEKDEETLRREERKQKEGSSW 214
Query: 249 HRDAAIRAQY----TKPAQPITCAT 269
D R + +P QP T +
Sbjct: 215 RLDLNTRDKILDKNNRPLQPFTIVS 239
>sp|P78318|IGBP1_HUMAN Immunoglobulin-binding protein 1 OS=Homo sapiens GN=IGBP1 PE=1 SV=1
Length = 339
Score = 73.2 bits (178), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 114/232 (49%), Gaps = 42/232 (18%)
Query: 8 ELP-LPSLFERGRKIH---QIATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNET 60
+LP LP LFE GR++ ++ATE S + V KG ++LEK +M+ +L LFS NE
Sbjct: 8 QLPRLPELFETGRQLLDEVEVATEPAGSRIVQEKVFKGLDLLEKAAEMLSQLDLFSRNED 67
Query: 61 KDDISTANLKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFC----------- 108
++I++ +LKY+LVP F G L ++++ RL L+ ++ +++ C
Sbjct: 68 LEEIASTDLKYLLVPAFQGALTMKQVNPSKRLDHLQRAREHFINYLTQCHCYHVAEFELP 127
Query: 109 EIMELVPEEELEAVAQAKPT--AFTDQRARKIARFKRQRAAESKLQEIKERKERRGRSTR 166
+ M E + A P+ A QR KI R+K+++ E +L +K
Sbjct: 128 KTMNNSAENHTANSSMAYPSLVAMASQRQAKIQRYKQKKELEHRLSAMK----------- 176
Query: 167 AAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDML 218
+ VE+G+ D E RE +L + + +L+ +E + +E +L
Sbjct: 177 -----SAVESGQA-----DDERVREYYLLHLQRWIDISLEEIESIDQEIKIL 218
>sp|Q61249|IGBP1_MOUSE Immunoglobulin-binding protein 1 OS=Mus musculus GN=Igbp1 PE=1 SV=1
Length = 340
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 20/161 (12%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEDVEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASTD 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELV-----------PE 116
LKY++VP G L ++++ RL L+ ++ F++ C + E
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFVHFLTQCHCYHVAEFQLPQTKTNSAE 136
Query: 117 EELEAVAQAKPT--AFTDQRARKIARFKRQRAAESKLQEIK 155
+ + A P A QR KI R+K+++ E +L +K
Sbjct: 137 NNTASSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALK 177
>sp|Q9QZ29|IGB1B_MOUSE Immunoglobulin-binding protein 1b OS=Mus musculus GN=Igbp1b PE=2
SV=1
Length = 343
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 98/188 (52%), Gaps = 22/188 (11%)
Query: 28 SGCDP--DAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEK- 84
+G P + VR+ ++LEK DM+ +L LFS NE ++I++A+LKY+++P G L K
Sbjct: 34 TGSKPIQEKVREALKLLEKASDMLSQLDLFSRNEDWEEIASADLKYLMLPALKGALTLKL 93
Query: 85 IAQDDRLQILKASQAKLKEFISFCEIMEL----VPEEELEAVAQAKPTAFTDQRARKIAR 140
+ RL +L+ ++ F++ + +P + ++ + P A +D + + +
Sbjct: 94 VGSSKRLGLLQDAREHFMNFLTQTHSYHVADFQLPWAQSSSM-EGNPAATSDAQEQNLVA 152
Query: 141 FKRQRAAESKLQEIKERK--ERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTIS 198
QR ++K+Q K++K E+R S ++A VE+G+ D E RE +L +
Sbjct: 153 MASQR--QTKIQRYKQKKAVEQRLSSLKSA-----VESGQA-----DDERVREYYLLQLR 200
Query: 199 LAVCKALD 206
+ +LD
Sbjct: 201 RWISISLD 208
>sp|O08836|IGBP1_RAT Immunoglobulin-binding protein 1 OS=Rattus norvegicus GN=Igbp1 PE=2
SV=2
Length = 340
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 107/212 (50%), Gaps = 17/212 (8%)
Query: 15 FERGRKIHQ---IATE---SGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTAN 68
FE +K+ + +ATE S D V KG E+LEK M+ +L LFS NE ++I++ +
Sbjct: 17 FETSKKLLEELEVATEPTGSRTIQDKVSKGLELLEKAAGMLSQLDLFSRNEDLEEIASID 76
Query: 69 LKYILVPYFLGEL-IEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKP 127
LKY++VP G L ++++ RL L+ ++ F++ C V E +L Q K
Sbjct: 77 LKYLMVPALQGALTMKQVNPSKRLDHLQRAREHFIHFLTQCHCYH-VAEFQL---PQTKN 132
Query: 128 TAFTDQRARKIARFKRQRAAESKLQ-EIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDG 186
+ + AR + A S+ Q +I+ K+++ R +A + VE+G+ D
Sbjct: 133 NSAENNTARSSMAYPNLVAMASQRQAKIERYKQKKEVEHRLSALKSAVESGQA-----DD 187
Query: 187 EEEREAWLTTISLAVCKALDLLEMLKKEEDML 218
E RE +L + + +L+ +E + +E +L
Sbjct: 188 ERVREYYLLHLRRWIGISLEEIESIDQEIKIL 219
>sp|Q04372|TAP42_YEAST Type 2A phosphatase-associated protein 42 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=TAP42 PE=1
SV=1
Length = 366
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 12/74 (16%)
Query: 48 MVGKLGLFSSNETKDDISTANLKYILVPYFLGELIEKIAQDD---------RLQILKASQ 98
+ +L LFS+NET DD+STA++K++ V Y+LG LI + +D +L LK S
Sbjct: 49 IFDRLALFSTNETIDDVSTASIKFLAVDYYLGLLISRRQSNDSDVAQRQSMKLIYLKKS- 107
Query: 99 AKLKEFISFCEIME 112
++ FI+F +++
Sbjct: 108 --VESFINFLTLLQ 119
>sp|Q7MA30|RL21_WOLSU 50S ribosomal protein L21 OS=Wolinella succinogenes (strain ATCC
29543 / DSM 1740 / LMG 7466 / NCTC 11488 / FDC 602W)
GN=rplU PE=3 SV=1
Length = 103
Score = 32.0 bits (71), Expect = 7.1, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 39/81 (48%)
Query: 89 DRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQRAAE 148
D++ + S+ +L E ++ C+ L+ A+ + + RA+K+ FK++R +
Sbjct: 23 DKMSLEPKSKVELNEVLALCKDDNLILGTPFVEGAKIEIEVINEDRAKKVVTFKKRRRKD 82
Query: 149 SKLQEIKERKERRGRSTRAAA 169
SK + R R R + AA
Sbjct: 83 SKTKRGFRRDFTRVRILKIAA 103
>sp|B2G849|EX7L_LACRJ Exodeoxyribonuclease 7 large subunit OS=Lactobacillus reuteri
(strain JCM 1112) GN=xseA PE=3 SV=1
Length = 445
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 29/183 (15%)
Query: 50 GKLGLFSSNETKDDISTANL---KYILVPYFLGELIEKIAQDDRLQILKASQAKL----K 102
K+ + SS + D + A+L + P EL + +D L LK Q +L +
Sbjct: 225 SKIPVISSVGHETDTTIADLVADQRAATPTAAAELATPVKLNDALMTLKDDQNRLLNTMR 284
Query: 103 EFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQ--RAAESKLQEIKERKER 160
I+F + +L ++L++ +PT + A+K+ + +Q +AA++K+QE++ ER
Sbjct: 285 TKINF-DRQQL--NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQELQMNVER 341
Query: 161 RGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLA-----------VCKALDLLE 209
AA+P V+ E+ V ++ + L T SLA + K LD L
Sbjct: 342 LSGRLTAASPLHRVQQQEQLV------DQLKKQLVTASLASQNEKKQQVTTLIKQLDSLS 395
Query: 210 MLK 212
LK
Sbjct: 396 PLK 398
>sp|A5VKR6|EX7L_LACRD Exodeoxyribonuclease 7 large subunit OS=Lactobacillus reuteri
(strain DSM 20016) GN=xseA PE=3 SV=1
Length = 445
Score = 31.6 bits (70), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 29/183 (15%)
Query: 50 GKLGLFSSNETKDDISTANL---KYILVPYFLGELIEKIAQDDRLQILKASQAKL----K 102
K+ + SS + D + A+L + P EL + +D L LK Q +L +
Sbjct: 225 SKIPVISSVGHETDTTIADLVADQRAATPTAAAELATPVKLNDALMTLKDDQNRLLNTMR 284
Query: 103 EFISFCEIMELVPEEELEAVAQAKPTAFTDQRARKIARFKRQ--RAAESKLQEIKERKER 160
I+F + +L ++L++ +PT + A+K+ + +Q +AA++K+QE++ ER
Sbjct: 285 TKINF-DRQQL--NKQLQSYIFQQPTRLYENYAQKVDQLTQQLGQAAQNKMQELQMNVER 341
Query: 161 RGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLA-----------VCKALDLLE 209
AA+P V+ E+ V ++ + L T SLA + K LD L
Sbjct: 342 LSGRLTAASPLHRVQQQEQLV------DQLKKQLVTASLASQNEKKQQVTTLIKQLDSLS 395
Query: 210 MLK 212
LK
Sbjct: 396 PLK 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.366
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,359,886
Number of Sequences: 539616
Number of extensions: 4722688
Number of successful extensions: 22814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 266
Number of HSP's that attempted gapping in prelim test: 22222
Number of HSP's gapped (non-prelim): 750
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)