Query 020484
Match_columns 325
No_of_seqs 182 out of 272
Neff 6.2
Searched_HMMs 46136
Date Fri Mar 29 02:45:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020484.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020484hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF04177 TAP42: TAP42-like fam 100.0 1E-60 2.3E-65 463.4 17.0 264 10-325 1-281 (340)
2 KOG2830 Protein phosphatase 2A 100.0 7.6E-42 1.7E-46 322.3 20.2 258 1-281 1-276 (324)
3 KOG2830 Protein phosphatase 2A 94.8 0.13 2.8E-06 49.9 8.2 30 127-156 121-150 (324)
4 PF04177 TAP42: TAP42-like fam 93.4 0.059 1.3E-06 52.7 3.0 38 244-282 256-299 (340)
5 PF12309 KBP_C: KIF-1 binding 48.2 86 0.0019 31.3 8.1 76 33-113 263-344 (371)
6 PF00392 GntR: Bacterial regul 29.9 31 0.00067 24.9 1.3 19 306-324 8-26 (64)
7 TIGR00256 D-tyrosyl-tRNA(Tyr) 21.4 65 0.0014 28.0 2.0 70 41-112 41-117 (145)
8 PF04380 BMFP: Membrane fusoge 19.3 4.3E+02 0.0093 20.3 6.6 31 89-122 25-55 (79)
9 KOG2785 C2H2-type Zn-finger pr 16.6 86 0.0019 31.5 1.8 32 245-278 24-55 (390)
10 PF14774 FAM177: FAM177 family 15.0 63 0.0014 27.3 0.4 16 54-69 24-39 (123)
No 1
>PF04177 TAP42: TAP42-like family; InterPro: IPR007304 The TOR signalling pathway activates a cell-growth program in response to nutrients []. TIP41 interacts with TAP42 and negatively regulates the TOR signalling pathway [].; GO: 0009966 regulation of signal transduction; PDB: 3QC1_A 2V0P_A.
Probab=100.00 E-value=1e-60 Score=463.42 Aligned_cols=264 Identities=34% Similarity=0.475 Sum_probs=173.5
Q ss_pred CHHHHHHHHHHHhh------hhccCCCcHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhhHhhc
Q 020484 10 PLPSLFERGRKIHQ------IATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGELIE 83 (325)
Q Consensus 10 sL~~lF~~a~~~~~------~~~~s~~~Q~~l~~~i~~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg~L~~ 83 (325)
||+++|..|+++|. .+.+|+++|+.|+++|+.|+.|+.+|+++||||+||++|||+|++|+||+||||||.|+.
T Consensus 1 ~L~~lf~~~~~~~~~le~~~~~~~s~~~q~~v~~~i~~l~~~~~~v~~l~lFS~NE~ledIsT~~LkyLllpy~Lg~L~~ 80 (340)
T PF04177_consen 1 SLSELFDEALKLYDELENSSLPSSSPEYQEKVKSAIADLEKAQKMVSQLSLFSSNEELEDISTSDLKYLLLPYYLGELTL 80 (340)
T ss_dssp -HHHHHHHHHHHHHHCCC-SS-TTSHHHHHHHHHHHHHHHHHHHHHCCCTCCHCSSSCCCS-CCCHGGGGHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhCCcCCCCCcccccccchhHHHHHHHHHHHHH
Confidence 69999999999996 366788999999999999999999999999999999999999999999999999999999
Q ss_pred c-cchhhHHHHHHHHHHHHHHHHHHhhhcCCCChhHHHHHhhc----------CCcchHHHHHHHHHHHHHHHHHHHHHH
Q 020484 84 K-IAQDDRLQILKASQAKLKEFISFCEIMELVPEEELEAVAQA----------KPTAFTDQRARKIARFKRQRAAESKLQ 152 (325)
Q Consensus 84 k-~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~----------~~~~~a~~R~~KIarfK~eKel~~kL~ 152 (325)
+ ....+|+.+|+.|+.||.+||++|++|||+++++...+... .+.+|+.+|+.||+|||++|+|+++|.
T Consensus 81 k~~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~~~~~~~~~~~~~~~~~~~a~~R~~KI~r~K~eKel~~~L~ 160 (340)
T PF04177_consen 81 KLSNPEDRLEILKRAKEYYIEFLKRCEDYGLLDKDDPKLLESYQDNPSSSSSSSLSDPAARRNEKIARFKREKELEQKLK 160 (340)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHHHCCHHHTT-S-HHHHHHHHT-HHS---SSCCHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred hhcCchhHHHHHHHHHHHHHHHHHHHHHCCCCChhHHHHHhhcccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 56789999999999999999999999999999988766533 467999999999999999999999999
Q ss_pred HHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhhcccCCCCc
Q 020484 153 EIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISLAVCKALDLLEMLKKEEDMLSAVKERQLKGGEEE 232 (325)
Q Consensus 153 ~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l~~~~a~~~Lesi~~ElemL~~~~~~~~~~~~~~ 232 (325)
.|++.... +.+++|||++|++||++|++|+++|+++|+||.+|++||+++++++.......
T Consensus 161 ~l~~~~~~-------------------~~~~~DEE~~Re~~l~~L~~~~~~s~~~l~si~~El~mL~~~~~~~~~~~~~~ 221 (340)
T PF04177_consen 161 ELEKRRES-------------------DDDDDDEEIEREYYLLLLKLWVLKSLEELESIEQELEMLEMRPKMKEAPESEP 221 (340)
T ss_dssp HHHHHHHT-------------------TTT-S-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHTT----------
T ss_pred HHHHhhcc-------------------cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCCcc
Confidence 99986541 12467899999999999999999999999999999999999998876642211
Q ss_pred chhhhhhhhhhhhhhhhhhhHHhhhcCCCCCCcchhhhhhhhhhccccccccccccCCCccccCccccCCCCchHHHHHH
Q 020484 233 FSEVVLDERSKKAESWHRDAAIRAQYTKPAQPITCATFAQDVLEGRAKVSQAHEHKHQPMIFGPASLVGGGLTSERERMA 312 (325)
Q Consensus 233 ~~~~~~d~r~~~~~~~~rd~~~~~~~~~p~~P~t~~~~~q~v~~g~~~~~~~~~~~~~p~~~~P~~~~~~~~~~~R~~l~ 312 (325)
......+........|+.+. +..+++.. ..|+|+ +||||+ +.|++++
T Consensus 222 ~~~~~~~~~~~~~~~~~l~~------------------------~~~~pl~~--~~~~~l--~pfti~-----~~R~~~~ 268 (340)
T PF04177_consen 222 SQDERDDEPDADGYSDRLES------------------------PKPGPLLS--KPGKPL--KPFTIT-----STREQLQ 268 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccc------------------------cCCCCCCC--CCCCCC--CCcccH-----HHHHHHH
Confidence 00000000000123333222 22223322 337887 999986 7999999
Q ss_pred hccCCCCCCCCCC
Q 020484 313 AQVFQPMHRNVLW 325 (325)
Q Consensus 313 ~~VF~p~h~LPT~ 325 (325)
++||+|||+||||
T Consensus 269 ~~VFgpg~~LPTM 281 (340)
T PF04177_consen 269 KKVFGPGHPLPTM 281 (340)
T ss_dssp -------------
T ss_pred HHhcCCCCCCCcC
Confidence 9999999999999
No 2
>KOG2830 consensus Protein phosphatase 2A-associated protein [Signal transduction mechanisms]
Probab=100.00 E-value=7.6e-42 Score=322.27 Aligned_cols=258 Identities=32% Similarity=0.441 Sum_probs=214.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhhccCCCcHHHHHHHHHHHHHHHHHhhhhcCCCCCCCCcccccccchhhchHHHhhH
Q 020484 1 MGEVSREELPLPSLFERGRKIHQIATESGCDPDAVRKGCEVLEKCEDMVGKLGLFSSNETKDDISTANLKYILVPYFLGE 80 (325)
Q Consensus 1 ~~~~~~~~~sL~~lF~~a~~~~~~~~~s~~~Q~~l~~~i~~l~~~~~~v~~l~LFS~NE~leDIsT~~LkyLlvpy~Lg~ 80 (325)
|+++++...++..||+...+.+.....+..+|..+.+.|..+..|+.||++|+|||+||++|||||++||||+||||||.
T Consensus 1 Ma~~~e~~~~~~~L~d~~~~~~~~~~E~~~~~~~~~~~i~q~~~~t~m~~ql~lFSsNE~iedIsT~sLkyLlVpyflg~ 80 (324)
T KOG2830|consen 1 MASLDELELPLQKLYDLSLKGKQLRDESEVATEPVLKRIKQLKVATEMVNQLALFSSNETIEDISTNSLKYLLVPYFLGK 80 (324)
T ss_pred CcchhhhccchhhhHHHHHHhHHHHhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhcccchhhhccccccchhhhHHHHHH
Confidence 78889999999999888888777777888999999999999999999999999999999999999999999999999999
Q ss_pred hhcccchhhHHHHHHHHHHHHHHHHHHhhhcCCCChhHH---------HHH----hhcCCcchHHHHHHHHHHHHHHHHH
Q 020484 81 LIEKIAQDDRLQILKASQAKLKEFISFCEIMELVPEEEL---------EAV----AQAKPTAFTDQRARKIARFKRQRAA 147 (325)
Q Consensus 81 L~~k~~~~~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~---------~~~----~~~~~~~~a~~R~~KIarfK~eKel 147 (325)
|++|+.+.+|+..|+.|..+|..||.+|+.|+|++.... .+. .......++..|..||+||+++||+
T Consensus 81 Lt~k~~~~~~~~~lk~a~~~f~~~ls~c~~y~L~~~~~~k~~~~~~~~~~~~s~~~~~~l~~~~~~r~~Kier~~r~kEl 160 (324)
T KOG2830|consen 81 LTEKQINEDRLDHLKLAEEHFINFLSRCQDYHLAPFELPKTKNNAADRALKISRMAEKSLVEAALKRQKKIERYKRKKEL 160 (324)
T ss_pred HHHHhhcCchHHHHHHHHHHHHHHHHHHhccCccchhhccccCchhHHHHHHhhhccchhHHHHHHHHhHHHHHHHHHHH
Confidence 999988888899999999999999999999999654322 111 2245678999999999999999999
Q ss_pred HHHHHHHHHHHHhcccccccCCCCCCcccCCCCCCCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhHhhcc
Q 020484 148 ESKLQEIKERKERRGRSTRAAAPSAPVEAGEEDVLDDDGEEEREAWLTTISL-AVCKALDLLEMLKKEEDMLSAVKERQL 226 (325)
Q Consensus 148 ~~kL~~L~~~~~~~~r~~~~~~~s~~~e~~~~~~~~~DeE~~Re~~l~~L~l-~~~~a~~~Lesi~~ElemL~~~~~~~~ 226 (325)
+.+|..++.. |+++ .+||+.+|++|++++.. |+-.+++++++|.+|+.+|+.....+-
T Consensus 161 ~~~l~~~~~a----------------ve~~-----~~Dde~lrelyl~~l~~~~~d~~lee~E~i~~e~r~lkE~~s~r~ 219 (324)
T KOG2830|consen 161 KHRLTRMQSA----------------VEDG-----QDDDEHLRELYLLQLQRGWIDISLEEEESIDQEERLLKEGESSRD 219 (324)
T ss_pred HHHHHHHHHh----------------hhcC-----CCchHHHHHHHHHHHHhhhhchhHHHHHHHHHHHHHHhccccccc
Confidence 9999999852 4443 45677799999999999 999999999999999999994433321
Q ss_pred cCCCCcchhhhhhhhhhhhhhhhhhhHHhhhcCC--CCCCc-chhh-hhhhhhhccccc
Q 020484 227 KGGEEEFSEVVLDERSKKAESWHRDAAIRAQYTK--PAQPI-TCAT-FAQDVLEGRAKV 281 (325)
Q Consensus 227 ~~~~~~~~~~~~d~r~~~~~~~~rd~~~~~~~~~--p~~P~-t~~~-~~q~v~~g~~~~ 281 (325)
.. .+..+.....+ +.+|||++|++.+++|||. |..|| ||+| |.|.+..|..+.
T Consensus 220 ~s-t~~t~~~e~~p-~~~~fi~~r~~~q~kVfG~Gyp~lPtMsvdE~~~~~~~~g~a~~ 276 (324)
T KOG2830|consen 220 PS-TSNTSRGETRP-PLFPFIITRNETQKKVFGLGYPGLPTMTVDEFLDQEFEEGIAKA 276 (324)
T ss_pred cc-cCccccccCCC-CcchHHHHHHHHhhhhhhcCCCCCccccHHHHHHHHHHhhhccc
Confidence 11 10111111122 3379999999999999987 98899 9999 999998885443
No 3
>KOG2830 consensus Protein phosphatase 2A-associated protein [Signal transduction mechanisms]
Probab=94.80 E-value=0.13 Score=49.90 Aligned_cols=30 Identities=27% Similarity=0.339 Sum_probs=25.3
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020484 127 PTAFTDQRARKIARFKRQRAAESKLQEIKE 156 (325)
Q Consensus 127 ~~~~a~~R~~KIarfK~eKel~~kL~~L~~ 156 (325)
...++..|..||++|+...-+...+....+
T Consensus 121 ~~~~~~~~~~~~s~~~~~~l~~~~~~r~~K 150 (324)
T KOG2830|consen 121 TKNNAADRALKISRMAEKSLVEAALKRQKK 150 (324)
T ss_pred ccCchhHHHHHHhhhccchhHHHHHHHHhH
Confidence 457899999999999999888887776654
No 4
>PF04177 TAP42: TAP42-like family; InterPro: IPR007304 The TOR signalling pathway activates a cell-growth program in response to nutrients []. TIP41 interacts with TAP42 and negatively regulates the TOR signalling pathway [].; GO: 0009966 regulation of signal transduction; PDB: 3QC1_A 2V0P_A.
Probab=93.43 E-value=0.059 Score=52.74 Aligned_cols=38 Identities=21% Similarity=0.330 Sum_probs=0.0
Q ss_pred hhhhh--hhhhHHhhhcCC--CCCCc-chhh-hhhhhhhcccccc
Q 020484 244 KAESW--HRDAAIRAQYTK--PAQPI-TCAT-FAQDVLEGRAKVS 282 (325)
Q Consensus 244 ~~~~~--~rd~~~~~~~~~--p~~P~-t~~~-~~q~v~~g~~~~~ 282 (325)
+||+| +|+..++.|||. | +|| ||+| |.+.+..|..+..
T Consensus 256 ~pfti~~~R~~~~~~VFgpg~~-LPTMTveE~~e~E~~~g~~~~~ 299 (340)
T PF04177_consen 256 KPFTITSTREQLQKKVFGPGHP-LPTMTVEEFLEQEMREGNIPQG 299 (340)
T ss_dssp ---------------------------------------------
T ss_pred CCcccHHHHHHHHHHhcCCCCC-CCcCcHHHHHHHHHHhccCccc
Confidence 89999 999999999987 5 888 9999 7888888876543
No 5
>PF12309 KBP_C: KIF-1 binding protein C terminal; InterPro: IPR022083 This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 365 and 621 amino acids in length. There is a conserved LLP sequence motif. KBP is a binding partner for KIF1Balpha that is a regulator of its transport function and thus represents a type of kinesin interacting protein.
Probab=48.15 E-value=86 Score=31.30 Aligned_cols=76 Identities=18% Similarity=0.327 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCC--CCCcccccccch-hhchHHHhhHhhcccc---hhhHHHHHHHHHHHHHHHHH
Q 020484 33 DAVRKGCEVLEKCEDMVGKLGLFSSN--ETKDDISTANLK-YILVPYFLGELIEKIA---QDDRLQILKASQAKLKEFIS 106 (325)
Q Consensus 33 ~~l~~~i~~l~~~~~~v~~l~LFS~N--E~leDIsT~~Lk-yLlvpy~Lg~L~~k~~---~~~R~~~L~~A~~~~~~FL~ 106 (325)
..+.++|..|+....... +++ +.-+.++.++++ ||..=|++|.|+.|+. +..++++|..|-.+|..+.+
T Consensus 263 ~l~~~ai~~y~~fl~s~~-----~~~~~~~~~~~~~d~~~~~l~a~f~~arl~~K~~~~~~~~~~~~l~~sl~~y~~vv~ 337 (371)
T PF12309_consen 263 QLCSKAIKYYQKFLDSYK-----SPDSGKLPEKLDEDELRPYLYAYFHIARLYSKLITSDPKEQLENLEKSLEYYKWVVD 337 (371)
T ss_pred HHHHHHHHHHHHHHHHHc-----CCccccCCCCCcHHHHHHHHHHHHHHHHHHccccCCChHHHHHHHHHHHHHHHHHHH
Confidence 445566777755544333 444 223335555554 6677788999999984 45799999999999999999
Q ss_pred HhhhcCC
Q 020484 107 FCEIMEL 113 (325)
Q Consensus 107 ~~~~y~l 113 (325)
-|+.+..
T Consensus 338 y~~~~~~ 344 (371)
T PF12309_consen 338 YCEKHPE 344 (371)
T ss_pred HHHhChh
Confidence 9999976
No 6
>PF00392 GntR: Bacterial regulatory proteins, gntR family; InterPro: IPR000524 Many bacterial transcription regulation proteins bind DNA through a helix-turn-helix (HTH) motif, which can be classified into subfamilies on the basis of sequence similarities. The HTH GntR family has many members distributed among diverse bacterial groups that regulate various biological processes. It was named GntR after the Bacillus subtilis repressor of the gluconate operon []. Family members include GntR, HutC, KorA, NtaR, FadR, ExuR, FarR, DgoR and PhnF. The crystal structure of the FadR protein has been determined []. In general, these proteins contain a DNA-binding HTH domain at the N terminus, and an effector-binding or oligomerisation domain at the C terminus (IPR011711 from INTERPRO). The DNA-binding domain is well conserved in structure for the whole of the GntR family, consisting of a 3-helical bundle core with a small beta-sheet (wing); the GntR winged helix structure is similar to that found in several other transcriptional regulator families. The regions outside the DNA-binding domain are more variable and are consequently used to define GntR subfamilies []. This entry represents the N-terminal DNA-binding domain of the GntR family.; GO: 0003700 sequence-specific DNA binding transcription factor activity, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1HW1_B 1H9T_A 1HW2_A 1H9G_A 1E2X_A 3IHU_A 3C7J_A 2RA5_A 3BY6_C 3IC7_A ....
Probab=29.90 E-value=31 Score=24.93 Aligned_cols=19 Identities=16% Similarity=0.120 Sum_probs=14.0
Q ss_pred hHHHHHHhccCCCCCCCCC
Q 020484 306 SERERMAAQVFQPMHRNVL 324 (325)
Q Consensus 306 ~~R~~l~~~VF~p~h~LPT 324 (325)
.-++.+.++.+.||..|||
T Consensus 8 ~l~~~I~~g~~~~g~~lps 26 (64)
T PF00392_consen 8 QLRQAILSGRLPPGDRLPS 26 (64)
T ss_dssp HHHHHHHTTSS-TTSBE--
T ss_pred HHHHHHHcCCCCCCCEeCC
Confidence 3478999999999999997
No 7
>TIGR00256 D-tyrosyl-tRNA(Tyr) deacylase. This homodimeric enzyme appears able to cleave any D-amino acid (and glycine, which does not have distinct D/L forms) from charged tRNA. The name reflects characterization with respect to D-Tyr on tRNA(Tyr) as established in the literature, but substrate specificity seems much broader.
Probab=21.43 E-value=65 Score=28.03 Aligned_cols=70 Identities=17% Similarity=0.244 Sum_probs=42.9
Q ss_pred HHHHHHHHhhhhcCCCCCCCCccccccc--chhhchHHHhhHhhcccchhhHHHH-----HHHHHHHHHHHHHHhhhcC
Q 020484 41 VLEKCEDMVGKLGLFSSNETKDDISTAN--LKYILVPYFLGELIEKIAQDDRLQI-----LKASQAKLKEFISFCEIME 112 (325)
Q Consensus 41 ~l~~~~~~v~~l~LFS~NE~leDIsT~~--LkyLlvpy~Lg~L~~k~~~~~R~~~-----L~~A~~~~~~FL~~~~~y~ 112 (325)
....+.+-+-.+-||++.+..=..|-.+ -..|+||=+ .|+......+|..+ =+.|+.+|..|+..|+.++
T Consensus 41 ~~~~~~~Kil~lRif~de~gk~~~Sv~d~~geiL~VSQF--TL~a~~~KG~rPsF~~a~~~~~A~~ly~~fv~~l~~~~ 117 (145)
T TIGR00256 41 KADKLAEKVLNYRIFSDSEGKMNLNVQQAGGEILSVSQF--TLAADTKKGMRPSFSKGASPDRAEELYEYFVELCREKG 117 (145)
T ss_pred HHHHHHHHHhheEeccCCCCCccCCHHHCCCCEEEEECC--cccccCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcC
Confidence 3455667777789998844332233333 344666654 45544422223222 3678999999999999886
No 8
>PF04380 BMFP: Membrane fusogenic activity; InterPro: IPR007475 BMFP consists of two structural domains, a coiled-coil C-terminal domain via which the protein self-associates as a trimer, and an N-terminal domain disordered at neutral pH but adopting an amphipathic alpha-helical structure in the presence of phospholipid vesicles, high ionic strength, acidic pH or SDS. BMFP interacts with phospholipid vesicles though the predicted amphipathic alpha-helix induced in the N-terminal half of the protein and promotes aggregation and fusion of vesicles in vitro.
Probab=19.27 E-value=4.3e+02 Score=20.26 Aligned_cols=31 Identities=35% Similarity=0.464 Sum_probs=20.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhcCCCChhHHHHH
Q 020484 89 DRLQILKASQAKLKEFISFCEIMELVPEEELEAV 122 (325)
Q Consensus 89 ~R~~~L~~A~~~~~~FL~~~~~y~ll~~~~~~~~ 122 (325)
-+-++-+..+..+..+|.. +++|+.++-+..
T Consensus 25 ~~~e~e~~~r~~l~~~l~k---ldlVtREEFd~q 55 (79)
T PF04380_consen 25 PREEIEKNIRARLQSALSK---LDLVTREEFDAQ 55 (79)
T ss_pred hHHHHHHHHHHHHHHHHHH---CCCCcHHHHHHH
Confidence 4555555566666665554 899999987754
No 9
>KOG2785 consensus C2H2-type Zn-finger protein [General function prediction only]
Probab=16.58 E-value=86 Score=31.48 Aligned_cols=32 Identities=31% Similarity=0.515 Sum_probs=25.9
Q ss_pred hhhhhhhhHHhhhcCCCCCCcchhhhhhhhhhcc
Q 020484 245 AESWHRDAAIRAQYTKPAQPITCATFAQDVLEGR 278 (325)
Q Consensus 245 ~~~~~rd~~~~~~~~~p~~P~t~~~~~q~v~~g~ 278 (325)
--.|||=..-+.+++. ||||+++|.+++.+-.
T Consensus 24 KSdWHRYNLKRkVA~l--PPItaE~F~~k~~s~~ 55 (390)
T KOG2785|consen 24 KSDWHRYNLKRKVASL--PPITAEEFNEKVLSDD 55 (390)
T ss_pred hhhHHHhhHHhHhhcC--CCcCHHHHhHHHhhhh
Confidence 3679998788888754 8899999999987765
No 10
>PF14774 FAM177: FAM177 family
Probab=15.04 E-value=63 Score=27.34 Aligned_cols=16 Identities=38% Similarity=0.420 Sum_probs=13.9
Q ss_pred CCCCCCCCcccccccc
Q 020484 54 LFSSNETKDDISTANL 69 (325)
Q Consensus 54 LFS~NE~leDIsT~~L 69 (325)
=||++|+++|+||++=
T Consensus 24 hFsdGetmEE~StdeE 39 (123)
T PF14774_consen 24 HFSDGETMEEYSTDEE 39 (123)
T ss_pred EecCCceeeeeccccc
Confidence 4999999999999774
Done!