Query 020487
Match_columns 325
No_of_seqs 123 out of 1878
Neff 10.2
Searched_HMMs 46136
Date Fri Mar 29 02:47:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020487.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020487hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1064 AdhP Zn-dependent alco 100.0 7.6E-58 1.7E-62 388.7 30.0 305 1-325 4-337 (339)
2 COG0604 Qor NADPH:quinone redu 100.0 2.2E-55 4.8E-60 383.1 36.4 321 1-325 1-326 (326)
3 KOG1197 Predicted quinone oxid 100.0 1.4E-51 3E-56 327.5 28.9 321 2-325 10-330 (336)
4 KOG0023 Alcohol dehydrogenase, 100.0 6.9E-49 1.5E-53 323.1 27.0 306 2-324 11-353 (360)
5 KOG0024 Sorbitol dehydrogenase 100.0 2E-48 4.4E-53 321.1 28.2 308 1-325 5-352 (354)
6 COG1062 AdhC Zn-dependent alco 100.0 3.6E-48 7.7E-53 322.5 27.6 308 1-322 3-364 (366)
7 cd08281 liver_ADH_like1 Zinc-d 100.0 3.4E-47 7.4E-52 341.2 34.9 312 1-323 1-371 (371)
8 cd08291 ETR_like_1 2-enoyl thi 100.0 1.8E-46 3.9E-51 331.0 34.9 317 1-324 1-324 (324)
9 cd08239 THR_DH_like L-threonin 100.0 5.6E-46 1.2E-50 329.9 34.1 306 1-325 1-339 (339)
10 TIGR03451 mycoS_dep_FDH mycoth 100.0 1.1E-45 2.4E-50 330.0 35.0 311 1-324 2-357 (358)
11 KOG0025 Zn2+-binding dehydroge 100.0 6.9E-46 1.5E-50 300.2 27.3 314 2-315 21-341 (354)
12 cd08292 ETR_like_2 2-enoyl thi 100.0 6.9E-45 1.5E-49 321.1 36.2 323 1-324 1-324 (324)
13 PLN02740 Alcohol dehydrogenase 100.0 9.6E-45 2.1E-49 326.2 35.3 311 1-324 11-380 (381)
14 KOG0022 Alcohol dehydrogenase, 100.0 3E-45 6.5E-50 300.1 28.4 310 1-324 8-374 (375)
15 PLN02827 Alcohol dehydrogenase 100.0 2.7E-44 5.8E-49 322.4 35.6 308 1-325 13-376 (378)
16 TIGR02818 adh_III_F_hyde S-(hy 100.0 5.8E-44 1.2E-48 319.7 36.4 311 1-325 2-368 (368)
17 PLN02586 probable cinnamyl alc 100.0 1.6E-44 3.5E-49 322.0 32.7 306 1-325 11-353 (360)
18 cd08301 alcohol_DH_plants Plan 100.0 1.5E-43 3.2E-48 317.7 35.8 309 1-323 3-368 (369)
19 PRK09880 L-idonate 5-dehydroge 100.0 8E-44 1.7E-48 316.2 33.2 301 1-325 5-343 (343)
20 cd08300 alcohol_DH_class_III c 100.0 2.9E-43 6.2E-48 315.5 35.5 310 1-324 3-368 (368)
21 PLN02178 cinnamyl-alcohol dehy 100.0 1.3E-43 2.8E-48 317.0 33.0 305 2-325 6-348 (375)
22 PRK10309 galactitol-1-phosphat 100.0 4.5E-43 9.8E-48 312.1 34.6 310 1-325 1-346 (347)
23 TIGR02822 adh_fam_2 zinc-bindi 100.0 2.4E-43 5.1E-48 310.9 32.1 298 3-324 1-329 (329)
24 cd08277 liver_alcohol_DH_like 100.0 8.9E-43 1.9E-47 311.9 35.8 308 1-323 3-364 (365)
25 TIGR02819 fdhA_non_GSH formald 100.0 7.9E-43 1.7E-47 313.5 34.1 307 1-325 3-390 (393)
26 PLN03154 putative allyl alcoho 100.0 3E-42 6.4E-47 306.1 37.2 314 2-325 10-345 (348)
27 cd08295 double_bond_reductase_ 100.0 3E-42 6.4E-47 305.8 35.5 314 2-325 9-338 (338)
28 PLN02514 cinnamyl-alcohol dehy 100.0 1.9E-42 4E-47 308.7 33.7 304 1-325 10-350 (357)
29 cd08233 butanediol_DH_like (2R 100.0 3.7E-42 8E-47 306.8 35.2 307 1-324 1-351 (351)
30 cd08244 MDR_enoyl_red Possible 100.0 1.5E-41 3.3E-46 299.7 38.6 320 1-325 1-324 (324)
31 cd08290 ETR 2-enoyl thioester 100.0 5.1E-42 1.1E-46 304.9 34.7 324 1-325 1-341 (341)
32 PTZ00354 alcohol dehydrogenase 100.0 2E-41 4.3E-46 300.2 38.1 324 1-324 2-327 (334)
33 cd08230 glucose_DH Glucose deh 100.0 2.5E-42 5.4E-47 308.2 31.3 302 1-325 1-355 (355)
34 TIGR03201 dearomat_had 6-hydro 100.0 4.3E-42 9.3E-47 305.8 32.4 305 4-325 2-349 (349)
35 cd08238 sorbose_phosphate_red 100.0 7.4E-42 1.6E-46 310.0 34.2 311 1-325 3-368 (410)
36 cd08294 leukotriene_B4_DH_like 100.0 2.3E-41 5E-46 299.2 36.1 309 1-325 3-329 (329)
37 cd08231 MDR_TM0436_like Hypoth 100.0 2.8E-41 6.2E-46 302.2 35.3 309 2-325 2-361 (361)
38 TIGR02825 B4_12hDH leukotriene 100.0 2E-41 4.3E-46 299.0 33.8 299 11-324 15-325 (325)
39 cd08293 PTGR2 Prostaglandin re 100.0 2E-41 4.4E-46 301.5 33.9 306 12-325 20-345 (345)
40 TIGR01202 bchC 2-desacetyl-2-h 100.0 6.9E-42 1.5E-46 299.0 29.6 291 1-324 2-308 (308)
41 cd08296 CAD_like Cinnamyl alco 100.0 6.5E-41 1.4E-45 296.6 34.6 304 1-324 1-333 (333)
42 COG1063 Tdh Threonine dehydrog 100.0 4.6E-41 9.9E-46 297.0 33.5 310 1-325 1-350 (350)
43 PRK10754 quinone oxidoreductas 100.0 2E-40 4.4E-45 293.0 35.9 322 1-325 2-327 (327)
44 cd08237 ribitol-5-phosphate_DH 100.0 2.1E-41 4.6E-46 300.1 29.4 293 2-325 4-339 (341)
45 cd08274 MDR9 Medium chain dehy 100.0 1.5E-40 3.3E-45 296.5 34.8 311 1-325 1-350 (350)
46 cd05284 arabinose_DH_like D-ar 100.0 1.3E-40 2.8E-45 295.8 33.8 308 1-325 1-340 (340)
47 cd05282 ETR_like 2-enoyl thioe 100.0 2.3E-40 5.1E-45 292.0 34.8 319 6-324 3-323 (323)
48 cd05276 p53_inducible_oxidored 100.0 6.7E-40 1.5E-44 288.5 36.9 323 1-323 1-323 (323)
49 TIGR02817 adh_fam_1 zinc-bindi 100.0 3.4E-40 7.3E-45 292.7 34.4 316 2-324 1-334 (336)
50 cd05280 MDR_yhdh_yhfp Yhdh and 100.0 7.5E-40 1.6E-44 289.1 35.7 316 1-325 1-325 (325)
51 cd08246 crotonyl_coA_red croto 100.0 6.8E-40 1.5E-44 296.4 34.4 313 1-323 13-391 (393)
52 cd08283 FDH_like_1 Glutathione 100.0 1.4E-39 3E-44 293.2 35.3 309 1-325 1-386 (386)
53 cd08297 CAD3 Cinnamyl alcohol 100.0 2.7E-39 5.9E-44 287.4 36.7 312 1-325 1-341 (341)
54 cd08278 benzyl_alcohol_DH Benz 100.0 2E-39 4.3E-44 290.4 35.8 310 1-324 3-365 (365)
55 cd08289 MDR_yhfp_like Yhfp put 100.0 1.5E-39 3.3E-44 287.3 34.4 317 1-325 1-326 (326)
56 cd08263 Zn_ADH10 Alcohol dehyd 100.0 2.1E-39 4.6E-44 290.6 35.4 310 1-324 1-367 (367)
57 cd08285 NADP_ADH NADP(H)-depen 100.0 2.7E-39 5.9E-44 288.4 35.3 310 1-325 1-351 (351)
58 cd08270 MDR4 Medium chain dehy 100.0 4E-39 8.7E-44 281.9 35.7 303 1-325 1-305 (305)
59 cd08240 6_hydroxyhexanoate_dh_ 100.0 4.2E-39 9.1E-44 287.1 34.9 310 1-325 1-350 (350)
60 TIGR01751 crot-CoA-red crotony 100.0 3.8E-39 8.2E-44 291.7 34.8 314 1-324 8-386 (398)
61 cd08250 Mgc45594_like Mgc45594 100.0 6.9E-39 1.5E-43 283.4 35.7 314 1-324 2-329 (329)
62 cd05278 FDH_like Formaldehyde 100.0 4.3E-39 9.4E-44 286.8 34.1 309 1-325 1-347 (347)
63 cd08276 MDR7 Medium chain dehy 100.0 1.5E-38 3.3E-43 281.9 37.5 313 1-324 1-335 (336)
64 cd08260 Zn_ADH6 Alcohol dehydr 100.0 7.8E-39 1.7E-43 284.9 35.2 309 1-324 1-344 (345)
65 TIGR02823 oxido_YhdH putative 100.0 1.1E-38 2.4E-43 281.4 35.7 313 2-324 1-322 (323)
66 TIGR02824 quinone_pig3 putativ 100.0 2.5E-38 5.5E-43 278.9 37.7 324 1-324 1-324 (325)
67 cd08279 Zn_ADH_class_III Class 100.0 1.1E-38 2.5E-43 285.4 35.6 310 1-322 1-362 (363)
68 cd08253 zeta_crystallin Zeta-c 100.0 2.4E-38 5.2E-43 279.0 36.9 320 1-325 1-325 (325)
69 cd05286 QOR2 Quinone oxidoredu 100.0 3.3E-38 7.2E-43 277.4 37.3 320 2-325 1-320 (320)
70 PRK10083 putative oxidoreducta 100.0 2.4E-38 5.2E-43 281.1 35.0 304 1-325 1-337 (339)
71 KOG1198 Zinc-binding oxidoredu 100.0 6.1E-39 1.3E-43 279.7 29.8 318 3-325 8-345 (347)
72 cd08286 FDH_like_ADH2 formalde 100.0 4.7E-38 1E-42 279.8 36.1 308 1-325 1-345 (345)
73 cd08261 Zn_ADH7 Alcohol dehydr 100.0 4.2E-38 9.1E-43 279.3 35.6 305 1-324 1-336 (337)
74 PRK13771 putative alcohol dehy 100.0 1.9E-38 4.1E-43 281.2 32.4 305 1-325 1-333 (334)
75 cd08243 quinone_oxidoreductase 100.0 5.4E-38 1.2E-42 276.5 35.1 309 1-323 1-319 (320)
76 cd08266 Zn_ADH_like1 Alcohol d 100.0 6.5E-38 1.4E-42 278.4 35.9 315 1-325 1-342 (342)
77 cd08254 hydroxyacyl_CoA_DH 6-h 100.0 4.5E-38 9.7E-43 279.2 34.7 310 1-325 1-338 (338)
78 cd08249 enoyl_reductase_like e 100.0 9.9E-39 2.1E-43 283.3 30.3 312 1-324 1-338 (339)
79 PRK09422 ethanol-active dehydr 100.0 4.6E-38 1E-42 279.2 34.4 304 1-324 1-335 (338)
80 cd08272 MDR6 Medium chain dehy 100.0 1.4E-37 3.1E-42 274.4 36.6 319 1-325 1-326 (326)
81 cd08299 alcohol_DH_class_I_II_ 100.0 8.6E-38 1.9E-42 280.2 35.6 310 1-325 8-373 (373)
82 cd08284 FDH_like_2 Glutathione 100.0 1.1E-37 2.4E-42 277.4 35.3 306 1-325 1-344 (344)
83 cd08268 MDR2 Medium chain dehy 100.0 2.7E-37 5.9E-42 272.7 37.5 323 1-325 1-328 (328)
84 cd08252 AL_MDR Arginate lyase 100.0 1E-37 2.2E-42 276.7 34.6 318 1-324 1-336 (336)
85 cd08235 iditol_2_DH_like L-idi 100.0 1.3E-37 2.9E-42 276.8 35.2 306 1-324 1-343 (343)
86 cd08256 Zn_ADH2 Alcohol dehydr 100.0 1E-37 2.2E-42 278.1 34.5 305 1-323 1-350 (350)
87 cd08259 Zn_ADH5 Alcohol dehydr 100.0 1.1E-37 2.4E-42 276.0 34.4 305 1-324 1-332 (332)
88 cd08288 MDR_yhdh Yhdh putative 100.0 2.8E-37 6E-42 272.6 36.0 315 1-325 1-324 (324)
89 cd05283 CAD1 Cinnamyl alcohol 100.0 7.2E-38 1.6E-42 277.6 32.1 301 2-324 1-337 (337)
90 cd05279 Zn_ADH1 Liver alcohol 100.0 1.7E-37 3.7E-42 277.8 34.8 307 2-323 2-364 (365)
91 cd08236 sugar_DH NAD(P)-depend 100.0 3.9E-37 8.4E-42 273.8 34.8 309 1-323 1-343 (343)
92 cd08282 PFDH_like Pseudomonas 100.0 3.4E-37 7.5E-42 276.8 34.3 305 1-325 1-375 (375)
93 PRK05396 tdh L-threonine 3-deh 100.0 7.7E-37 1.7E-41 271.6 34.1 308 1-325 1-340 (341)
94 cd08262 Zn_ADH8 Alcohol dehydr 100.0 7E-37 1.5E-41 271.9 33.5 306 1-324 1-341 (341)
95 COG2130 Putative NADP-dependen 100.0 4E-37 8.8E-42 251.8 28.9 301 12-324 24-337 (340)
96 cd08273 MDR8 Medium chain dehy 100.0 1.3E-36 2.8E-41 269.1 34.6 315 1-323 1-330 (331)
97 cd08271 MDR5 Medium chain dehy 100.0 4.6E-36 9.9E-41 264.8 36.9 319 1-325 1-325 (325)
98 cd08234 threonine_DH_like L-th 100.0 2.3E-36 5E-41 267.8 34.5 302 1-324 1-334 (334)
99 cd08242 MDR_like Medium chain 100.0 1E-36 2.3E-41 268.3 32.0 288 1-325 1-319 (319)
100 cd08287 FDH_like_ADH3 formalde 100.0 2E-36 4.2E-41 269.5 34.0 306 1-325 1-345 (345)
101 cd08241 QOR1 Quinone oxidoredu 100.0 8.7E-36 1.9E-40 262.4 37.3 322 1-324 1-323 (323)
102 cd05285 sorbitol_DH Sorbitol d 100.0 3.7E-36 8E-41 267.4 33.8 302 4-323 2-341 (343)
103 cd08264 Zn_ADH_like2 Alcohol d 100.0 2.6E-36 5.7E-41 266.5 32.4 297 1-321 1-324 (325)
104 cd05288 PGDH Prostaglandin deh 100.0 9.1E-36 2E-40 263.5 35.2 311 2-323 3-329 (329)
105 cd08248 RTN4I1 Human Reticulon 100.0 1.3E-36 2.9E-41 271.1 30.1 320 1-324 1-350 (350)
106 cd05281 TDH Threonine dehydrog 100.0 6.4E-36 1.4E-40 265.6 32.7 307 1-325 1-341 (341)
107 cd08251 polyketide_synthase po 100.0 1.8E-35 3.8E-40 258.3 33.4 299 22-323 2-303 (303)
108 cd08269 Zn_ADH9 Alcohol dehydr 100.0 2.6E-35 5.6E-40 258.6 34.5 300 13-323 5-311 (312)
109 cd08275 MDR3 Medium chain dehy 100.0 7.1E-35 1.5E-39 258.5 37.3 320 2-325 1-337 (337)
110 cd08265 Zn_ADH3 Alcohol dehydr 100.0 2.5E-35 5.4E-40 265.5 34.5 296 15-323 39-383 (384)
111 cd08298 CAD2 Cinnamyl alcohol 100.0 2.1E-35 4.5E-40 261.2 32.4 298 1-323 1-329 (329)
112 cd08247 AST1_like AST1 is a cy 100.0 3.6E-35 7.7E-40 262.0 33.6 318 1-324 1-351 (352)
113 cd08232 idonate-5-DH L-idonate 100.0 4.7E-35 1E-39 259.9 33.5 294 13-325 7-339 (339)
114 TIGR00692 tdh L-threonine 3-de 100.0 4.4E-35 9.6E-40 260.1 33.2 301 8-325 6-340 (340)
115 cd08245 CAD Cinnamyl alcohol d 100.0 3E-35 6.6E-40 260.3 32.0 301 2-323 1-330 (330)
116 PLN02702 L-idonate 5-dehydroge 100.0 8.7E-35 1.9E-39 260.5 35.2 297 14-325 28-364 (364)
117 cd05289 MDR_like_2 alcohol deh 100.0 4.1E-35 8.9E-40 256.7 32.4 304 1-323 1-309 (309)
118 cd08258 Zn_ADH4 Alcohol dehydr 100.0 1.4E-34 3E-39 253.0 31.5 275 1-290 1-306 (306)
119 cd08267 MDR1 Medium chain dehy 100.0 1.4E-33 3E-38 248.3 31.4 305 6-323 3-319 (319)
120 cd05195 enoyl_red enoyl reduct 100.0 2.8E-33 6.1E-38 242.8 30.7 290 28-323 1-293 (293)
121 smart00829 PKS_ER Enoylreducta 100.0 8.3E-33 1.8E-37 239.5 30.3 284 32-323 2-288 (288)
122 TIGR03366 HpnZ_proposed putati 100.0 1.2E-32 2.5E-37 237.8 23.0 232 60-305 1-280 (280)
123 cd05188 MDR Medium chain reduc 100.0 5.9E-31 1.3E-35 226.1 27.2 237 29-267 1-261 (271)
124 KOG1196 Predicted NAD-dependen 100.0 2E-30 4.4E-35 211.8 27.7 302 13-324 20-339 (343)
125 KOG1202 Animal-type fatty acid 100.0 1.1E-30 2.4E-35 243.7 20.3 300 10-324 1424-1740(2376)
126 cd08255 2-desacetyl-2-hydroxye 100.0 1.8E-28 3.8E-33 211.7 25.6 251 57-322 20-276 (277)
127 PF08240 ADH_N: Alcohol dehydr 99.7 7.6E-18 1.6E-22 123.9 8.9 82 27-108 1-109 (109)
128 PF00107 ADH_zinc_N: Zinc-bind 99.7 5.9E-17 1.3E-21 123.4 13.2 116 151-266 1-117 (130)
129 PF13602 ADH_zinc_N_2: Zinc-bi 99.6 1.5E-14 3.3E-19 109.6 8.9 124 183-323 1-127 (127)
130 cd00401 AdoHcyase S-adenosyl-L 99.4 3.4E-11 7.4E-16 107.4 18.8 174 128-325 189-376 (413)
131 PRK09424 pntA NAD(P) transhydr 99.3 2.1E-11 4.6E-16 111.4 14.4 126 137-263 162-313 (509)
132 TIGR00561 pntA NAD(P) transhyd 98.7 4.9E-07 1.1E-11 82.9 14.7 149 138-287 162-337 (511)
133 PRK08306 dipicolinate synthase 98.6 6.8E-06 1.5E-10 71.2 19.1 133 139-284 151-286 (296)
134 PRK11873 arsM arsenite S-adeno 98.5 7.9E-07 1.7E-11 76.4 9.4 167 135-322 73-258 (272)
135 TIGR00518 alaDH alanine dehydr 98.3 2.5E-05 5.4E-10 69.9 14.2 147 140-292 167-329 (370)
136 PF11017 DUF2855: Protein of u 98.3 0.00021 4.5E-09 61.5 18.4 253 47-317 19-312 (314)
137 PRK05476 S-adenosyl-L-homocyst 98.2 2.2E-05 4.7E-10 70.8 12.3 103 127-242 198-303 (425)
138 COG2518 Pcm Protein-L-isoaspar 98.1 2.3E-05 5E-10 63.0 8.7 119 112-239 47-170 (209)
139 TIGR02853 spore_dpaA dipicolin 98.1 0.00048 1E-08 59.4 17.3 109 139-260 150-259 (287)
140 TIGR00936 ahcY adenosylhomocys 98.0 7.8E-05 1.7E-09 66.9 12.2 101 128-241 182-285 (406)
141 PLN02494 adenosylhomocysteinas 98.0 8.2E-05 1.8E-09 67.4 11.4 101 128-241 241-344 (477)
142 COG0300 DltE Short-chain dehyd 97.9 7.2E-05 1.6E-09 62.9 9.3 81 138-218 4-94 (265)
143 PRK00517 prmA ribosomal protei 97.9 0.00047 1E-08 58.4 13.6 142 77-241 65-216 (250)
144 PRK08324 short chain dehydroge 97.9 0.00011 2.4E-09 71.4 10.9 115 92-217 385-507 (681)
145 COG4221 Short-chain alcohol de 97.8 0.00019 4.2E-09 58.9 9.7 78 139-218 5-91 (246)
146 COG3967 DltE Short-chain dehyd 97.8 0.00014 3.1E-09 57.8 8.5 80 139-218 4-88 (245)
147 PF13460 NAD_binding_10: NADH( 97.8 0.00039 8.6E-09 55.8 11.3 93 143-241 1-100 (183)
148 PTZ00075 Adenosylhomocysteinas 97.7 0.00059 1.3E-08 62.1 12.6 90 138-240 252-343 (476)
149 COG2230 Cfa Cyclopropane fatty 97.7 0.00019 4.1E-09 60.8 8.0 106 125-241 58-179 (283)
150 PRK05786 fabG 3-ketoacyl-(acyl 97.7 0.00088 1.9E-08 56.1 12.2 103 139-241 4-138 (238)
151 PRK12742 oxidoreductase; Provi 97.6 0.0011 2.3E-08 55.6 11.6 102 139-242 5-135 (237)
152 PRK12771 putative glutamate sy 97.6 5.8E-05 1.3E-09 71.8 4.0 94 136-235 133-250 (564)
153 cd05213 NAD_bind_Glutamyl_tRNA 97.6 0.00052 1.1E-08 60.1 9.6 107 104-221 140-251 (311)
154 PLN03209 translocon at the inn 97.6 0.00092 2E-08 62.4 11.4 106 133-241 73-210 (576)
155 PRK06198 short chain dehydroge 97.5 0.0064 1.4E-07 51.7 15.5 80 139-218 5-94 (260)
156 PRK05693 short chain dehydroge 97.5 0.001 2.2E-08 57.2 10.6 77 141-217 2-81 (274)
157 PRK05993 short chain dehydroge 97.5 0.0012 2.7E-08 56.8 10.5 78 139-217 3-85 (277)
158 PF01488 Shikimate_DH: Shikima 97.4 0.00068 1.5E-08 51.6 7.1 92 139-239 11-110 (135)
159 PRK06139 short chain dehydroge 97.4 0.001 2.3E-08 58.8 9.2 80 139-218 6-94 (330)
160 PRK07060 short chain dehydroge 97.4 0.002 4.3E-08 54.2 10.5 78 139-218 8-87 (245)
161 PRK08177 short chain dehydroge 97.4 0.0016 3.6E-08 54.1 9.7 78 141-218 2-81 (225)
162 PRK08265 short chain dehydroge 97.4 0.0026 5.6E-08 54.2 11.0 78 139-218 5-90 (261)
163 PF02353 CMAS: Mycolic acid cy 97.3 0.00013 2.9E-09 62.3 2.6 100 129-239 52-167 (273)
164 PRK07806 short chain dehydroge 97.3 0.0043 9.3E-08 52.3 11.8 101 139-239 5-135 (248)
165 COG3288 PntA NAD/NADP transhyd 97.3 0.0023 5.1E-08 54.1 9.2 149 138-289 162-335 (356)
166 PRK07109 short chain dehydroge 97.3 0.0035 7.5E-08 55.6 10.9 78 139-218 7-95 (334)
167 PRK06182 short chain dehydroge 97.2 0.0038 8.2E-08 53.6 10.8 80 139-218 2-84 (273)
168 PRK05872 short chain dehydroge 97.2 0.0011 2.4E-08 57.7 7.6 78 139-218 8-95 (296)
169 PRK12939 short chain dehydroge 97.2 0.0042 9E-08 52.4 10.9 80 139-218 6-94 (250)
170 PRK00045 hemA glutamyl-tRNA re 97.2 0.0045 9.7E-08 56.7 11.5 141 60-219 91-253 (423)
171 TIGR00406 prmA ribosomal prote 97.2 0.0029 6.2E-08 54.8 9.4 145 78-240 105-261 (288)
172 KOG1205 Predicted dehydrogenas 97.2 0.003 6.6E-08 53.7 9.2 102 139-242 11-153 (282)
173 PRK08017 oxidoreductase; Provi 97.2 0.0036 7.8E-08 53.0 9.8 76 141-217 3-83 (256)
174 PRK11705 cyclopropane fatty ac 97.1 0.0046 9.9E-08 55.7 10.6 110 121-238 149-267 (383)
175 PLN02780 ketoreductase/ oxidor 97.1 0.0033 7.1E-08 55.4 9.4 79 139-217 52-141 (320)
176 PRK06953 short chain dehydroge 97.1 0.0053 1.1E-07 50.9 10.1 78 141-218 2-80 (222)
177 PRK06128 oxidoreductase; Provi 97.1 0.0081 1.8E-07 52.4 11.6 101 139-241 54-194 (300)
178 TIGR03325 BphB_TodD cis-2,3-di 97.1 0.0036 7.8E-08 53.4 9.2 77 139-217 4-88 (262)
179 PRK12367 short chain dehydroge 97.1 0.0054 1.2E-07 51.8 9.8 76 140-218 14-89 (245)
180 PRK08261 fabG 3-ketoacyl-(acyl 97.1 0.0089 1.9E-07 55.4 12.1 79 139-217 209-293 (450)
181 PRK12829 short chain dehydroge 97.1 0.0034 7.4E-08 53.4 8.7 79 138-218 9-96 (264)
182 PRK07831 short chain dehydroge 97.1 0.005 1.1E-07 52.5 9.7 82 137-218 14-107 (262)
183 PRK06484 short chain dehydroge 97.1 0.0057 1.2E-07 57.7 10.9 101 139-241 268-403 (520)
184 PRK05866 short chain dehydroge 97.0 0.0058 1.3E-07 53.1 10.0 78 139-218 39-127 (293)
185 PF00670 AdoHcyase_NAD: S-aden 97.0 0.006 1.3E-07 47.3 8.7 100 138-253 21-122 (162)
186 PRK08339 short chain dehydroge 97.0 0.0048 1E-07 52.7 9.2 80 139-218 7-95 (263)
187 PRK00377 cbiT cobalt-precorrin 97.0 0.011 2.3E-07 48.2 10.8 100 133-237 34-144 (198)
188 TIGR01035 hemA glutamyl-tRNA r 97.0 0.024 5.1E-07 51.9 14.1 140 60-219 89-251 (417)
189 PRK06057 short chain dehydroge 97.0 0.0058 1.3E-07 51.8 9.5 80 139-218 6-89 (255)
190 TIGR01832 kduD 2-deoxy-D-gluco 97.0 0.0061 1.3E-07 51.4 9.5 80 139-218 4-90 (248)
191 PRK07904 short chain dehydroge 97.0 0.007 1.5E-07 51.3 9.9 82 137-218 5-97 (253)
192 PRK06196 oxidoreductase; Provi 97.0 0.0056 1.2E-07 53.8 9.5 79 139-217 25-108 (315)
193 PRK13394 3-hydroxybutyrate deh 97.0 0.006 1.3E-07 51.8 9.5 78 139-218 6-94 (262)
194 PRK07814 short chain dehydroge 97.0 0.0048 1E-07 52.7 8.8 77 139-217 9-96 (263)
195 PRK06200 2,3-dihydroxy-2,3-dih 97.0 0.0046 1E-07 52.7 8.7 77 139-217 5-89 (263)
196 PF02826 2-Hacid_dh_C: D-isome 97.0 0.0021 4.5E-08 51.4 6.1 88 139-239 35-128 (178)
197 PRK06841 short chain dehydroge 97.0 0.0057 1.2E-07 51.8 9.1 78 139-218 14-99 (255)
198 COG2910 Putative NADH-flavin r 97.0 0.019 4.1E-07 45.2 10.8 95 142-242 2-108 (211)
199 PRK08217 fabG 3-ketoacyl-(acyl 96.9 0.0072 1.6E-07 51.0 9.6 79 139-217 4-91 (253)
200 PRK07832 short chain dehydroge 96.9 0.026 5.6E-07 48.4 13.1 75 142-218 2-88 (272)
201 PRK06505 enoyl-(acyl carrier p 96.9 0.0091 2E-07 51.2 10.2 77 139-217 6-94 (271)
202 PRK09291 short chain dehydroge 96.9 0.0082 1.8E-07 50.9 9.9 76 140-217 2-82 (257)
203 PRK06949 short chain dehydroge 96.9 0.0063 1.4E-07 51.6 9.1 78 138-217 7-95 (258)
204 PRK07825 short chain dehydroge 96.9 0.01 2.3E-07 50.8 10.6 77 140-218 5-88 (273)
205 COG0686 Ald Alanine dehydrogen 96.9 0.0057 1.2E-07 52.0 8.4 209 26-243 29-273 (371)
206 PF01262 AlaDh_PNT_C: Alanine 96.9 0.0035 7.5E-08 49.6 6.9 97 140-239 20-140 (168)
207 PRK06500 short chain dehydroge 96.9 0.007 1.5E-07 51.0 9.3 78 139-218 5-90 (249)
208 PRK08261 fabG 3-ketoacyl-(acyl 96.9 0.0026 5.6E-08 58.9 7.1 96 133-242 27-127 (450)
209 PRK06180 short chain dehydroge 96.9 0.0075 1.6E-07 51.9 9.4 78 139-218 3-88 (277)
210 cd01080 NAD_bind_m-THF_DH_Cycl 96.9 0.014 2.9E-07 46.1 9.9 96 120-241 24-119 (168)
211 PRK06194 hypothetical protein; 96.9 0.0073 1.6E-07 52.2 9.4 77 140-218 6-93 (287)
212 PRK05854 short chain dehydroge 96.9 0.0068 1.5E-07 53.2 9.2 80 139-218 13-103 (313)
213 PRK08594 enoyl-(acyl carrier p 96.9 0.019 4E-07 48.9 11.6 77 139-217 6-96 (257)
214 PRK05867 short chain dehydroge 96.9 0.0077 1.7E-07 51.0 9.2 78 139-218 8-96 (253)
215 PRK08267 short chain dehydroge 96.9 0.0086 1.9E-07 50.9 9.4 78 141-218 2-87 (260)
216 PRK08628 short chain dehydroge 96.9 0.0074 1.6E-07 51.2 8.9 77 139-217 6-92 (258)
217 PRK07231 fabG 3-ketoacyl-(acyl 96.8 0.0078 1.7E-07 50.7 9.0 80 139-218 4-91 (251)
218 PRK12481 2-deoxy-D-gluconate 3 96.8 0.0083 1.8E-07 50.8 9.1 78 139-218 7-93 (251)
219 PRK13943 protein-L-isoaspartat 96.8 0.021 4.5E-07 50.1 11.6 99 133-237 74-179 (322)
220 cd01078 NAD_bind_H4MPT_DH NADP 96.8 0.041 8.9E-07 44.6 12.6 77 139-220 27-109 (194)
221 PRK07478 short chain dehydroge 96.8 0.012 2.5E-07 49.9 9.8 78 139-218 5-93 (254)
222 PRK07890 short chain dehydroge 96.8 0.0097 2.1E-07 50.4 9.3 78 139-218 4-92 (258)
223 PRK06079 enoyl-(acyl carrier p 96.8 0.0091 2E-07 50.6 9.1 77 139-217 6-92 (252)
224 TIGR00438 rrmJ cell division p 96.8 0.032 7E-07 45.0 11.8 99 134-238 27-146 (188)
225 COG2242 CobL Precorrin-6B meth 96.8 0.028 6E-07 44.5 10.8 99 133-239 28-136 (187)
226 PRK07453 protochlorophyllide o 96.8 0.0094 2E-07 52.5 9.3 79 139-217 5-92 (322)
227 PRK12937 short chain dehydroge 96.8 0.026 5.5E-07 47.4 11.7 36 139-174 4-39 (245)
228 PRK07576 short chain dehydroge 96.8 0.012 2.6E-07 50.3 9.7 79 139-217 8-95 (264)
229 PRK04148 hypothetical protein; 96.8 0.016 3.5E-07 43.5 9.0 80 138-225 15-94 (134)
230 PF01135 PCMT: Protein-L-isoas 96.8 0.0031 6.7E-08 51.6 5.7 109 120-237 55-171 (209)
231 PRK06398 aldose dehydrogenase; 96.8 0.0015 3.2E-08 55.7 3.9 72 139-217 5-81 (258)
232 PRK06720 hypothetical protein; 96.7 0.022 4.9E-07 45.0 10.2 78 139-218 15-103 (169)
233 PRK05884 short chain dehydroge 96.7 0.016 3.4E-07 48.2 9.8 75 142-217 2-78 (223)
234 KOG1610 Corticosteroid 11-beta 96.7 0.015 3.4E-07 49.6 9.6 105 138-242 27-168 (322)
235 PRK07063 short chain dehydroge 96.7 0.013 2.8E-07 49.8 9.5 78 139-218 6-96 (260)
236 PRK13942 protein-L-isoaspartat 96.7 0.015 3.3E-07 47.9 9.5 98 132-237 69-175 (212)
237 PRK05653 fabG 3-ketoacyl-(acyl 96.7 0.013 2.8E-07 49.1 9.4 80 139-218 4-92 (246)
238 PRK06172 short chain dehydroge 96.7 0.011 2.4E-07 50.0 9.0 78 139-218 6-94 (253)
239 PRK06077 fabG 3-ketoacyl-(acyl 96.7 0.027 5.9E-07 47.4 11.4 101 140-242 6-144 (252)
240 PRK09072 short chain dehydroge 96.7 0.0095 2.1E-07 50.8 8.6 80 139-218 4-90 (263)
241 PRK06181 short chain dehydroge 96.7 0.011 2.3E-07 50.4 8.9 78 141-218 2-88 (263)
242 PRK07062 short chain dehydroge 96.7 0.0088 1.9E-07 51.0 8.3 78 139-218 7-97 (265)
243 PRK07533 enoyl-(acyl carrier p 96.7 0.018 3.9E-07 49.0 10.2 77 139-217 9-97 (258)
244 PRK05876 short chain dehydroge 96.7 0.013 2.8E-07 50.4 9.4 77 139-217 5-92 (275)
245 PRK06484 short chain dehydroge 96.7 0.0097 2.1E-07 56.2 9.3 78 139-218 4-89 (520)
246 PRK07677 short chain dehydroge 96.7 0.017 3.7E-07 48.8 10.0 76 140-217 1-87 (252)
247 PRK07067 sorbitol dehydrogenas 96.7 0.013 2.9E-07 49.7 9.3 76 140-217 6-89 (257)
248 PRK12828 short chain dehydroge 96.7 0.013 2.8E-07 48.9 9.2 78 139-218 6-92 (239)
249 PRK08213 gluconate 5-dehydroge 96.7 0.015 3.2E-07 49.5 9.5 78 139-218 11-99 (259)
250 PRK07523 gluconate 5-dehydroge 96.7 0.013 2.8E-07 49.7 9.2 80 139-218 9-97 (255)
251 PF12847 Methyltransf_18: Meth 96.7 0.006 1.3E-07 44.5 6.2 91 139-237 1-110 (112)
252 PRK10538 malonic semialdehyde 96.7 0.013 2.9E-07 49.4 9.1 77 142-218 2-84 (248)
253 PRK07424 bifunctional sterol d 96.7 0.016 3.5E-07 52.6 10.0 76 139-217 177-254 (406)
254 PRK06603 enoyl-(acyl carrier p 96.7 0.019 4E-07 49.0 10.0 77 139-217 7-95 (260)
255 PRK08862 short chain dehydroge 96.7 0.01 2.2E-07 49.5 8.2 78 139-217 4-92 (227)
256 PRK08690 enoyl-(acyl carrier p 96.7 0.02 4.4E-07 48.8 10.2 78 139-218 5-94 (261)
257 PRK06138 short chain dehydroge 96.7 0.013 2.9E-07 49.3 9.1 77 140-218 5-91 (252)
258 PRK08340 glucose-1-dehydrogena 96.7 0.021 4.6E-07 48.5 10.3 75 142-218 2-86 (259)
259 PRK08303 short chain dehydroge 96.6 0.021 4.6E-07 49.9 10.4 35 139-173 7-41 (305)
260 KOG0725 Reductases with broad 96.6 0.0096 2.1E-07 51.0 8.0 80 139-218 7-99 (270)
261 PRK06114 short chain dehydroge 96.6 0.015 3.3E-07 49.2 9.3 78 139-218 7-96 (254)
262 PRK08415 enoyl-(acyl carrier p 96.6 0.023 5E-07 48.8 10.4 101 139-241 4-146 (274)
263 PRK08589 short chain dehydroge 96.6 0.013 2.8E-07 50.3 8.9 78 139-218 5-92 (272)
264 PRK07774 short chain dehydroge 96.6 0.017 3.7E-07 48.7 9.5 77 139-217 5-92 (250)
265 CHL00194 ycf39 Ycf39; Provisio 96.6 0.014 3E-07 51.4 9.2 72 142-217 2-73 (317)
266 PRK12823 benD 1,6-dihydroxycyc 96.6 0.012 2.7E-07 49.9 8.6 77 139-217 7-93 (260)
267 PRK06101 short chain dehydroge 96.6 0.014 2.9E-07 49.1 8.8 76 141-217 2-80 (240)
268 PRK14175 bifunctional 5,10-met 96.6 0.025 5.5E-07 48.4 10.2 95 120-241 138-233 (286)
269 PRK06125 short chain dehydroge 96.6 0.027 5.9E-07 47.8 10.7 78 139-218 6-91 (259)
270 PRK12826 3-ketoacyl-(acyl-carr 96.6 0.013 2.9E-07 49.3 8.7 40 139-178 5-44 (251)
271 KOG1014 17 beta-hydroxysteroid 96.6 0.017 3.8E-07 49.3 9.1 81 138-218 47-136 (312)
272 PRK07035 short chain dehydroge 96.6 0.017 3.6E-07 48.8 9.3 76 140-217 8-94 (252)
273 PRK06482 short chain dehydroge 96.6 0.017 3.7E-07 49.6 9.4 78 141-218 3-86 (276)
274 PRK07024 short chain dehydroge 96.6 0.02 4.4E-07 48.6 9.8 78 140-217 2-87 (257)
275 PRK07326 short chain dehydroge 96.6 0.025 5.5E-07 47.2 10.2 80 139-218 5-92 (237)
276 PRK07454 short chain dehydroge 96.6 0.024 5.2E-07 47.5 10.0 79 138-218 4-93 (241)
277 PRK08643 acetoin reductase; Va 96.6 0.018 3.8E-07 48.8 9.2 77 140-218 2-89 (256)
278 PRK08264 short chain dehydroge 96.6 0.022 4.8E-07 47.6 9.7 75 139-218 5-83 (238)
279 PRK08226 short chain dehydroge 96.6 0.018 3.9E-07 49.0 9.3 77 139-217 5-91 (263)
280 PRK08085 gluconate 5-dehydroge 96.6 0.018 4E-07 48.7 9.3 78 139-218 8-96 (254)
281 KOG1208 Dehydrogenases with di 96.6 0.015 3.2E-07 50.8 8.7 104 139-242 34-174 (314)
282 PRK06197 short chain dehydroge 96.6 0.016 3.5E-07 50.6 9.2 41 139-179 15-55 (306)
283 PRK05717 oxidoreductase; Valid 96.5 0.02 4.3E-07 48.5 9.4 78 139-218 9-94 (255)
284 PRK09186 flagellin modificatio 96.5 0.022 4.8E-07 48.2 9.7 42 139-180 3-44 (256)
285 PRK06935 2-deoxy-D-gluconate 3 96.5 0.018 3.9E-07 48.9 9.0 77 139-218 14-101 (258)
286 PRK08993 2-deoxy-D-gluconate 3 96.5 0.021 4.5E-07 48.4 9.3 78 139-218 9-95 (253)
287 PRK09242 tropinone reductase; 96.5 0.021 4.5E-07 48.5 9.3 78 139-218 8-98 (257)
288 KOG1201 Hydroxysteroid 17-beta 96.5 0.01 2.2E-07 50.4 7.1 78 139-218 37-124 (300)
289 PRK08159 enoyl-(acyl carrier p 96.5 0.027 5.8E-07 48.4 10.0 78 138-217 8-97 (272)
290 PRK08263 short chain dehydroge 96.5 0.022 4.7E-07 48.9 9.4 77 140-218 3-87 (275)
291 PRK08277 D-mannonate oxidoredu 96.5 0.021 4.5E-07 49.1 9.3 77 139-217 9-96 (278)
292 PRK07856 short chain dehydroge 96.5 0.017 3.8E-07 48.8 8.7 73 139-217 5-84 (252)
293 PRK06483 dihydromonapterin red 96.5 0.03 6.6E-07 46.8 10.0 77 140-218 2-84 (236)
294 PRK06179 short chain dehydroge 96.5 0.012 2.5E-07 50.4 7.6 75 140-218 4-83 (270)
295 PRK08278 short chain dehydroge 96.5 0.016 3.4E-07 49.8 8.4 37 139-175 5-41 (273)
296 PRK07985 oxidoreductase; Provi 96.5 0.065 1.4E-06 46.6 12.3 35 139-173 48-82 (294)
297 PRK07666 fabG 3-ketoacyl-(acyl 96.5 0.025 5.4E-07 47.3 9.5 79 140-218 7-94 (239)
298 PRK05875 short chain dehydroge 96.5 0.018 3.9E-07 49.4 8.8 41 139-179 6-46 (276)
299 PRK12743 oxidoreductase; Provi 96.5 0.022 4.7E-07 48.3 9.2 77 140-218 2-90 (256)
300 PRK07097 gluconate 5-dehydroge 96.5 0.023 4.9E-07 48.5 9.3 78 139-218 9-97 (265)
301 PRK05650 short chain dehydroge 96.5 0.022 4.7E-07 48.8 9.2 77 142-218 2-87 (270)
302 PF02254 TrkA_N: TrkA-N domain 96.4 0.091 2E-06 38.5 11.3 91 143-237 1-95 (116)
303 PRK07791 short chain dehydroge 96.4 0.029 6.2E-07 48.6 9.9 37 138-174 4-40 (286)
304 PRK12429 3-hydroxybutyrate deh 96.4 0.027 5.9E-07 47.6 9.6 77 139-217 3-90 (258)
305 PRK08251 short chain dehydroge 96.4 0.034 7.4E-07 46.8 10.1 76 140-217 2-90 (248)
306 COG1748 LYS9 Saccharopine dehy 96.4 0.028 6.1E-07 50.2 9.8 95 141-241 2-102 (389)
307 PRK08703 short chain dehydroge 96.4 0.018 4E-07 48.2 8.4 42 139-180 5-46 (239)
308 PRK06113 7-alpha-hydroxysteroi 96.4 0.026 5.6E-07 47.8 9.3 77 139-217 10-97 (255)
309 PLN02253 xanthoxin dehydrogena 96.4 0.024 5.1E-07 48.8 9.1 78 139-218 17-104 (280)
310 PRK07074 short chain dehydroge 96.4 0.029 6.3E-07 47.5 9.5 79 140-218 2-87 (257)
311 PLN00141 Tic62-NAD(P)-related 96.4 0.031 6.7E-07 47.3 9.5 77 139-218 16-95 (251)
312 COG4122 Predicted O-methyltran 96.4 0.056 1.2E-06 44.4 10.4 101 134-237 54-165 (219)
313 TIGR03206 benzo_BadH 2-hydroxy 96.4 0.029 6.2E-07 47.2 9.3 79 139-217 2-89 (250)
314 TIGR02469 CbiT precorrin-6Y C5 96.4 0.075 1.6E-06 39.2 10.6 99 133-238 13-122 (124)
315 PRK14192 bifunctional 5,10-met 96.4 0.046 9.9E-07 47.0 10.4 78 138-241 157-234 (283)
316 TIGR00507 aroE shikimate 5-deh 96.3 0.041 8.9E-07 47.2 10.1 90 138-238 115-214 (270)
317 COG2264 PrmA Ribosomal protein 96.3 0.029 6.4E-07 48.1 8.9 149 78-242 108-267 (300)
318 PRK12936 3-ketoacyl-(acyl-carr 96.3 0.035 7.6E-07 46.5 9.4 78 139-218 5-90 (245)
319 PF00106 adh_short: short chai 96.3 0.034 7.3E-07 43.6 8.8 77 142-218 2-90 (167)
320 PRK06914 short chain dehydroge 96.3 0.052 1.1E-06 46.7 10.5 79 140-218 3-91 (280)
321 PRK12384 sorbitol-6-phosphate 96.2 0.034 7.4E-07 47.2 9.1 40 140-179 2-41 (259)
322 PRK06124 gluconate 5-dehydroge 96.2 0.031 6.8E-07 47.3 8.8 78 139-218 10-98 (256)
323 TIGR02622 CDP_4_6_dhtase CDP-g 96.2 0.029 6.3E-07 50.0 8.9 77 140-217 4-84 (349)
324 PRK07984 enoyl-(acyl carrier p 96.2 0.033 7.2E-07 47.5 8.9 79 139-217 5-93 (262)
325 PRK07792 fabG 3-ketoacyl-(acyl 96.2 0.037 8.1E-07 48.4 9.4 80 139-218 11-99 (306)
326 PRK07502 cyclohexadienyl dehyd 96.2 0.051 1.1E-06 47.6 10.2 90 141-240 7-102 (307)
327 PRK07370 enoyl-(acyl carrier p 96.2 0.041 8.8E-07 46.8 9.4 77 139-217 5-96 (258)
328 PRK13944 protein-L-isoaspartat 96.2 0.035 7.5E-07 45.5 8.6 97 133-237 66-172 (205)
329 PF02670 DXP_reductoisom: 1-de 96.2 0.08 1.7E-06 39.5 9.6 51 143-193 1-56 (129)
330 PRK06701 short chain dehydroge 96.2 0.04 8.6E-07 47.8 9.3 37 139-175 45-81 (290)
331 PRK07775 short chain dehydroge 96.2 0.047 1E-06 46.9 9.6 79 140-218 10-97 (274)
332 PRK08063 enoyl-(acyl carrier p 96.2 0.041 8.9E-07 46.3 9.1 77 139-217 3-91 (250)
333 PRK06719 precorrin-2 dehydroge 96.2 0.061 1.3E-06 41.9 9.3 86 139-235 12-97 (157)
334 PF03446 NAD_binding_2: NAD bi 96.2 0.06 1.3E-06 42.3 9.4 86 142-239 3-95 (163)
335 PRK07577 short chain dehydroge 96.2 0.031 6.8E-07 46.5 8.3 74 140-218 3-78 (234)
336 PLN02657 3,8-divinyl protochlo 96.1 0.04 8.7E-07 50.0 9.5 80 138-218 58-146 (390)
337 PF05368 NmrA: NmrA-like famil 96.1 0.037 8.1E-07 46.2 8.7 71 143-217 1-73 (233)
338 PRK05557 fabG 3-ketoacyl-(acyl 96.1 0.044 9.6E-07 45.9 9.3 37 139-175 4-40 (248)
339 PRK06463 fabG 3-ketoacyl-(acyl 96.1 0.066 1.4E-06 45.3 10.4 78 139-218 6-89 (255)
340 TIGR00080 pimt protein-L-isoas 96.1 0.012 2.6E-07 48.7 5.6 97 133-237 71-176 (215)
341 PF06325 PrmA: Ribosomal prote 96.1 0.035 7.5E-07 48.0 8.4 146 78-243 107-264 (295)
342 TIGR00715 precor6x_red precorr 96.1 0.022 4.8E-07 48.2 7.0 74 142-218 2-75 (256)
343 PRK06523 short chain dehydroge 96.1 0.0089 1.9E-07 50.8 4.7 72 139-217 8-86 (260)
344 PRK08219 short chain dehydroge 96.1 0.073 1.6E-06 44.0 10.2 76 141-218 4-81 (227)
345 TIGR01963 PHB_DH 3-hydroxybuty 96.1 0.058 1.3E-06 45.5 9.7 76 141-218 2-88 (255)
346 PRK13940 glutamyl-tRNA reducta 96.1 0.094 2E-06 47.8 11.3 73 139-220 180-254 (414)
347 PRK12938 acetyacetyl-CoA reduc 96.1 0.034 7.4E-07 46.7 8.1 78 139-218 2-91 (246)
348 PRK03369 murD UDP-N-acetylmura 96.0 0.023 4.9E-07 53.2 7.5 72 137-218 9-80 (488)
349 PRK07889 enoyl-(acyl carrier p 96.0 0.06 1.3E-06 45.7 9.5 78 139-218 6-95 (256)
350 PLN02986 cinnamyl-alcohol dehy 96.0 0.044 9.6E-07 48.2 8.9 76 139-217 4-86 (322)
351 PRK06718 precorrin-2 dehydroge 96.0 0.023 4.9E-07 46.4 6.5 90 139-237 9-99 (202)
352 PRK00107 gidB 16S rRNA methylt 96.0 0.026 5.7E-07 45.4 6.7 95 137-238 43-145 (187)
353 PLN02730 enoyl-[acyl-carrier-p 96.0 0.051 1.1E-06 47.4 9.0 38 139-177 8-47 (303)
354 COG0169 AroE Shikimate 5-dehyd 96.0 0.034 7.3E-07 47.7 7.6 92 139-237 125-225 (283)
355 PF02882 THF_DHG_CYH_C: Tetrah 96.0 0.078 1.7E-06 41.3 9.0 79 138-242 34-112 (160)
356 cd01075 NAD_bind_Leu_Phe_Val_D 96.0 0.11 2.3E-06 42.4 10.3 79 139-229 27-107 (200)
357 PRK12935 acetoacetyl-CoA reduc 96.0 0.06 1.3E-06 45.2 9.3 78 139-218 5-94 (247)
358 KOG1210 Predicted 3-ketosphing 96.0 0.065 1.4E-06 45.9 9.1 45 138-182 31-75 (331)
359 PRK08220 2,3-dihydroxybenzoate 95.9 0.047 1E-06 46.0 8.5 36 139-174 7-42 (252)
360 TIGR01289 LPOR light-dependent 95.9 0.062 1.3E-06 47.2 9.4 79 140-218 3-91 (314)
361 PRK08618 ornithine cyclodeamin 95.9 0.1 2.2E-06 46.0 10.8 101 138-249 125-232 (325)
362 PRK06997 enoyl-(acyl carrier p 95.9 0.076 1.6E-06 45.2 9.7 77 139-217 5-93 (260)
363 PRK07102 short chain dehydroge 95.9 0.059 1.3E-06 45.2 9.0 77 141-218 2-86 (243)
364 PRK14191 bifunctional 5,10-met 95.9 0.69 1.5E-05 39.7 15.2 95 120-241 137-232 (285)
365 COG0373 HemA Glutamyl-tRNA red 95.9 0.29 6.3E-06 44.2 13.4 93 139-241 177-277 (414)
366 PF03807 F420_oxidored: NADP o 95.9 0.13 2.8E-06 36.2 9.3 85 142-237 1-93 (96)
367 KOG1200 Mitochondrial/plastidi 95.9 0.039 8.4E-07 43.9 6.8 77 140-218 14-100 (256)
368 PRK05565 fabG 3-ketoacyl-(acyl 95.9 0.054 1.2E-06 45.4 8.6 77 140-218 5-93 (247)
369 PLN02781 Probable caffeoyl-CoA 95.9 0.12 2.5E-06 43.3 10.3 101 134-236 63-176 (234)
370 PRK08416 7-alpha-hydroxysteroi 95.8 0.069 1.5E-06 45.4 9.1 35 139-173 7-41 (260)
371 PRK12825 fabG 3-ketoacyl-(acyl 95.8 0.075 1.6E-06 44.5 9.3 37 139-175 5-41 (249)
372 TIGR02632 RhaD_aldol-ADH rhamn 95.8 0.065 1.4E-06 52.3 9.8 112 94-218 379-503 (676)
373 PRK12746 short chain dehydroge 95.8 0.077 1.7E-06 44.8 9.2 38 140-177 6-44 (254)
374 PLN02214 cinnamoyl-CoA reducta 95.8 0.077 1.7E-06 47.2 9.5 78 138-218 8-91 (342)
375 PLN02653 GDP-mannose 4,6-dehyd 95.8 0.035 7.7E-07 49.3 7.3 37 139-175 5-41 (340)
376 PRK08936 glucose-1-dehydrogena 95.8 0.082 1.8E-06 44.9 9.3 36 139-174 6-41 (261)
377 PF03435 Saccharop_dh: Sacchar 95.8 0.095 2.1E-06 47.5 10.2 90 143-236 1-96 (386)
378 PRK10792 bifunctional 5,10-met 95.7 0.099 2.1E-06 44.7 9.4 95 120-241 139-234 (285)
379 cd05212 NAD_bind_m-THF_DH_Cycl 95.7 0.11 2.4E-06 39.5 8.8 77 139-241 27-103 (140)
380 PRK14189 bifunctional 5,10-met 95.7 0.085 1.8E-06 45.2 8.9 77 139-241 157-233 (285)
381 PF10727 Rossmann-like: Rossma 95.7 0.071 1.5E-06 39.8 7.5 87 139-237 9-102 (127)
382 PRK05855 short chain dehydroge 95.7 0.066 1.4E-06 51.2 9.4 80 139-218 314-402 (582)
383 PLN02989 cinnamyl-alcohol dehy 95.7 0.076 1.6E-06 46.8 9.1 77 138-217 3-86 (325)
384 PLN02896 cinnamyl-alcohol dehy 95.7 0.11 2.4E-06 46.3 10.3 77 138-217 8-88 (353)
385 PLN00016 RNA-binding protein; 95.7 0.048 1E-06 49.3 7.9 95 140-239 52-165 (378)
386 PF01370 Epimerase: NAD depend 95.7 0.037 8E-07 46.1 6.8 73 143-218 1-75 (236)
387 PRK09135 pteridine reductase; 95.7 0.092 2E-06 44.0 9.2 36 139-174 5-40 (249)
388 PRK07417 arogenate dehydrogena 95.7 0.12 2.5E-06 44.6 9.9 87 142-239 2-92 (279)
389 TIGR02415 23BDH acetoin reduct 95.7 0.078 1.7E-06 44.7 8.8 75 142-218 2-87 (254)
390 PRK11207 tellurite resistance 95.6 0.037 8.1E-07 45.0 6.4 95 136-238 27-134 (197)
391 COG0569 TrkA K+ transport syst 95.6 0.11 2.4E-06 43.2 9.3 79 142-224 2-82 (225)
392 PRK12827 short chain dehydroge 95.6 0.1 2.3E-06 43.7 9.4 33 140-172 6-38 (249)
393 cd01065 NAD_bind_Shikimate_DH 95.6 0.097 2.1E-06 40.6 8.4 94 138-239 17-117 (155)
394 PLN02244 tocopherol O-methyltr 95.6 0.028 6.2E-07 49.9 6.0 94 138-239 117-224 (340)
395 PRK12745 3-ketoacyl-(acyl-carr 95.6 0.075 1.6E-06 44.9 8.4 76 141-218 3-90 (256)
396 TIGR03589 PseB UDP-N-acetylglu 95.6 0.11 2.4E-06 45.9 9.6 76 140-218 4-84 (324)
397 PLN03075 nicotianamine synthas 95.6 0.097 2.1E-06 45.1 8.9 95 139-238 123-233 (296)
398 PRK14177 bifunctional 5,10-met 95.6 0.2 4.3E-06 42.8 10.7 89 139-253 158-246 (284)
399 PRK13656 trans-2-enoyl-CoA red 95.6 0.14 3E-06 45.8 10.1 79 138-219 39-142 (398)
400 PRK14103 trans-aconitate 2-met 95.6 0.14 3.1E-06 43.4 10.0 95 133-237 23-125 (255)
401 PRK06550 fabG 3-ketoacyl-(acyl 95.6 0.079 1.7E-06 44.1 8.4 72 139-217 4-76 (235)
402 PRK08642 fabG 3-ketoacyl-(acyl 95.6 0.11 2.3E-06 43.8 9.3 77 140-217 5-90 (253)
403 PRK14618 NAD(P)H-dependent gly 95.6 0.16 3.5E-06 44.9 10.7 96 141-239 5-105 (328)
404 PRK09134 short chain dehydroge 95.6 0.11 2.4E-06 44.0 9.4 77 139-217 8-96 (258)
405 PRK07023 short chain dehydroge 95.5 0.063 1.4E-06 45.1 7.7 35 142-176 3-37 (243)
406 PRK14967 putative methyltransf 95.5 0.31 6.6E-06 40.5 11.7 94 134-237 31-158 (223)
407 TIGR01472 gmd GDP-mannose 4,6- 95.5 0.07 1.5E-06 47.5 8.4 35 141-175 1-35 (343)
408 PF02558 ApbA: Ketopantoate re 95.5 0.03 6.5E-07 43.3 5.3 90 143-239 1-102 (151)
409 PRK06171 sorbitol-6-phosphate 95.5 0.017 3.7E-07 49.3 4.3 74 139-217 8-86 (266)
410 TIGR03840 TMPT_Se_Te thiopurin 95.5 0.11 2.3E-06 42.8 8.8 99 138-239 33-153 (213)
411 PLN02476 O-methyltransferase 95.5 0.18 3.8E-06 43.2 10.2 102 133-236 112-226 (278)
412 PRK08655 prephenate dehydrogen 95.5 0.087 1.9E-06 48.5 9.0 87 142-239 2-93 (437)
413 PRK07041 short chain dehydroge 95.5 0.13 2.7E-06 42.7 9.4 73 144-218 1-79 (230)
414 COG1052 LdhA Lactate dehydroge 95.5 0.14 3.1E-06 44.9 9.9 87 139-239 145-237 (324)
415 PRK12744 short chain dehydroge 95.5 0.096 2.1E-06 44.4 8.8 34 139-172 7-40 (257)
416 PRK07574 formate dehydrogenase 95.5 0.097 2.1E-06 47.1 9.1 89 139-239 191-285 (385)
417 PRK12747 short chain dehydroge 95.5 0.18 4E-06 42.5 10.4 104 139-242 3-148 (252)
418 KOG1502 Flavonol reductase/cin 95.5 0.07 1.5E-06 46.4 7.7 75 139-218 5-88 (327)
419 TIGR01809 Shik-DH-AROM shikima 95.5 0.068 1.5E-06 46.1 7.7 74 139-218 124-200 (282)
420 PRK14176 bifunctional 5,10-met 95.5 0.15 3.3E-06 43.6 9.6 95 120-241 144-239 (287)
421 PLN02686 cinnamoyl-CoA reducta 95.5 0.14 3E-06 46.1 10.0 44 138-181 51-94 (367)
422 PLN02589 caffeoyl-CoA O-methyl 95.4 0.24 5.2E-06 41.7 10.6 100 135-236 75-188 (247)
423 PRK11908 NAD-dependent epimera 95.4 0.11 2.4E-06 46.3 9.3 74 142-217 3-77 (347)
424 TIGR01470 cysG_Nterm siroheme 95.4 0.078 1.7E-06 43.4 7.5 89 140-237 9-99 (205)
425 PF02719 Polysacc_synt_2: Poly 95.4 0.11 2.5E-06 44.5 8.6 76 143-218 1-87 (293)
426 PRK14194 bifunctional 5,10-met 95.4 0.22 4.7E-06 43.0 10.4 94 120-241 139-234 (301)
427 PRK05599 hypothetical protein; 95.4 0.099 2.1E-06 44.1 8.3 74 142-218 2-87 (246)
428 COG2227 UbiG 2-polyprenyl-3-me 95.4 0.14 3.1E-06 42.2 8.7 94 138-237 58-160 (243)
429 TIGR01318 gltD_gamma_fam gluta 95.4 0.082 1.8E-06 49.2 8.4 77 139-219 140-237 (467)
430 PRK00258 aroE shikimate 5-dehy 95.4 0.16 3.5E-06 43.7 9.7 92 139-238 122-221 (278)
431 PRK12548 shikimate 5-dehydroge 95.3 0.26 5.6E-06 42.7 10.9 35 139-174 125-160 (289)
432 KOG1209 1-Acyl dihydroxyaceton 95.3 0.073 1.6E-06 43.0 6.7 79 139-218 6-91 (289)
433 PRK12550 shikimate 5-dehydroge 95.3 0.19 4E-06 43.1 9.8 68 136-217 118-187 (272)
434 PRK08125 bifunctional UDP-gluc 95.3 0.097 2.1E-06 51.0 9.0 78 138-217 313-391 (660)
435 PLN03139 formate dehydrogenase 95.3 0.12 2.5E-06 46.6 8.7 89 139-239 198-292 (386)
436 cd01079 NAD_bind_m-THF_DH NAD 95.3 0.16 3.5E-06 40.7 8.5 97 138-241 60-159 (197)
437 PLN02662 cinnamyl-alcohol dehy 95.2 0.085 1.8E-06 46.3 7.9 37 140-176 4-40 (322)
438 PLN02427 UDP-apiose/xylose syn 95.2 0.12 2.6E-06 46.8 9.0 76 139-217 13-95 (386)
439 PRK07069 short chain dehydroge 95.2 0.14 3E-06 43.1 8.9 37 143-179 2-39 (251)
440 TIGR01829 AcAcCoA_reduct aceto 95.2 0.13 2.8E-06 43.0 8.5 75 141-217 1-87 (242)
441 TIGR00872 gnd_rel 6-phosphoglu 95.2 0.41 9E-06 41.7 11.9 89 142-239 2-94 (298)
442 PRK07201 short chain dehydroge 95.2 0.093 2E-06 51.1 8.7 77 140-218 371-458 (657)
443 PRK08317 hypothetical protein; 95.2 0.26 5.7E-06 41.0 10.4 99 132-238 12-124 (241)
444 PRK06940 short chain dehydroge 95.2 0.13 2.8E-06 44.2 8.6 77 140-218 2-86 (275)
445 TIGR01214 rmlD dTDP-4-dehydror 95.2 0.069 1.5E-06 46.0 7.0 32 142-173 1-32 (287)
446 PRK14188 bifunctional 5,10-met 95.2 0.27 5.9E-06 42.5 10.3 94 120-241 138-233 (296)
447 PRK03659 glutathione-regulated 95.2 0.16 3.5E-06 48.8 10.0 94 141-238 401-498 (601)
448 PTZ00098 phosphoethanolamine N 95.2 0.087 1.9E-06 45.0 7.4 101 131-239 44-157 (263)
449 PRK13403 ketol-acid reductoiso 95.1 0.24 5.3E-06 43.1 9.9 86 139-237 15-105 (335)
450 PRK05447 1-deoxy-D-xylulose 5- 95.1 0.28 6E-06 43.9 10.4 95 141-236 2-120 (385)
451 PRK14172 bifunctional 5,10-met 95.1 0.22 4.7E-06 42.5 9.4 95 120-241 138-233 (278)
452 TIGR01830 3oxo_ACP_reduc 3-oxo 95.1 0.13 2.8E-06 42.9 8.2 74 143-218 1-86 (239)
453 PRK13243 glyoxylate reductase; 95.1 0.12 2.6E-06 45.8 8.2 87 139-239 149-241 (333)
454 PLN00198 anthocyanidin reducta 95.1 0.14 3E-06 45.5 8.7 75 140-217 9-89 (338)
455 PLN02240 UDP-glucose 4-epimera 95.1 0.15 3.2E-06 45.5 8.9 34 140-173 5-38 (352)
456 PRK06947 glucose-1-dehydrogena 95.0 0.16 3.5E-06 42.6 8.7 77 141-217 3-89 (248)
457 PRK14027 quinate/shikimate deh 95.0 0.3 6.5E-06 42.1 10.3 42 139-181 126-168 (283)
458 PRK15469 ghrA bifunctional gly 95.0 0.092 2E-06 46.0 7.3 87 139-239 135-227 (312)
459 PRK03562 glutathione-regulated 95.0 0.28 6.1E-06 47.3 11.1 93 141-237 401-497 (621)
460 PRK07578 short chain dehydroge 95.0 0.15 3.3E-06 41.3 8.2 64 142-218 2-65 (199)
461 PRK12549 shikimate 5-dehydroge 95.0 0.36 7.7E-06 41.7 10.7 90 139-237 126-226 (284)
462 PLN00015 protochlorophyllide r 95.0 0.14 3E-06 44.9 8.4 74 144-217 1-84 (308)
463 TIGR02685 pter_reduc_Leis pter 95.0 0.21 4.5E-06 42.6 9.4 33 141-173 2-34 (267)
464 PRK08309 short chain dehydroge 95.0 1.2 2.6E-05 35.5 12.9 78 142-220 2-87 (177)
465 PRK12809 putative oxidoreducta 95.0 0.12 2.6E-06 50.1 8.6 76 139-218 309-405 (639)
466 KOG1252 Cystathionine beta-syn 95.0 0.22 4.7E-06 43.2 8.9 58 133-190 96-156 (362)
467 PRK12859 3-ketoacyl-(acyl-carr 95.0 0.28 6E-06 41.6 9.9 33 139-171 5-39 (256)
468 COG2226 UbiE Methylase involve 94.9 0.37 8E-06 40.2 10.1 104 131-242 43-160 (238)
469 KOG1199 Short-chain alcohol de 94.9 0.22 4.7E-06 38.8 8.0 81 139-219 8-94 (260)
470 COG2519 GCD14 tRNA(1-methylade 94.9 0.14 3E-06 42.7 7.4 101 133-239 88-196 (256)
471 PRK12748 3-ketoacyl-(acyl-carr 94.9 0.19 4.2E-06 42.5 8.8 34 140-173 5-40 (256)
472 PRK14190 bifunctional 5,10-met 94.9 0.34 7.3E-06 41.6 10.0 95 120-241 138-233 (284)
473 PLN00203 glutamyl-tRNA reducta 94.9 0.24 5.2E-06 46.5 9.8 73 140-219 266-340 (519)
474 TIGR03466 HpnA hopanoid-associ 94.9 0.087 1.9E-06 46.3 6.8 72 142-217 2-73 (328)
475 PLN02650 dihydroflavonol-4-red 94.8 0.16 3.4E-06 45.3 8.5 40 139-178 4-43 (351)
476 TIGR03649 ergot_EASG ergot alk 94.8 0.097 2.1E-06 45.2 6.9 92 142-239 1-105 (285)
477 PRK06123 short chain dehydroge 94.8 0.23 4.9E-06 41.7 9.0 79 140-218 2-90 (248)
478 PLN02583 cinnamoyl-CoA reducta 94.8 0.29 6.3E-06 42.5 9.9 37 138-174 4-40 (297)
479 PRK14169 bifunctional 5,10-met 94.8 0.31 6.7E-06 41.7 9.5 77 139-241 155-231 (282)
480 PF01210 NAD_Gly3P_dh_N: NAD-d 94.8 0.072 1.6E-06 41.6 5.4 85 142-230 1-91 (157)
481 PRK08945 putative oxoacyl-(acy 94.7 0.096 2.1E-06 44.0 6.5 43 137-179 9-51 (247)
482 PLN02695 GDP-D-mannose-3',5'-e 94.7 0.14 3.1E-06 46.1 7.9 76 138-217 19-94 (370)
483 PRK14180 bifunctional 5,10-met 94.7 0.3 6.4E-06 41.8 9.3 95 120-241 138-233 (282)
484 PRK10669 putative cation:proto 94.7 0.36 7.9E-06 46.1 11.0 93 141-237 418-514 (558)
485 PRK09730 putative NAD(P)-bindi 94.7 0.21 4.6E-06 41.8 8.6 78 141-218 2-89 (247)
486 PF01596 Methyltransf_3: O-met 94.7 0.049 1.1E-06 44.5 4.4 99 137-237 43-154 (205)
487 TIGR01777 yfcH conserved hypot 94.7 0.035 7.6E-07 47.9 3.9 67 143-218 1-67 (292)
488 PRK07340 ornithine cyclodeamin 94.7 0.36 7.9E-06 42.1 10.1 101 138-250 123-229 (304)
489 TIGR00477 tehB tellurite resis 94.7 0.081 1.7E-06 42.9 5.7 96 133-237 24-132 (195)
490 PRK06849 hypothetical protein; 94.7 0.38 8.3E-06 43.6 10.7 96 139-234 3-103 (389)
491 PRK11036 putative S-adenosyl-L 94.7 0.18 3.9E-06 42.8 8.1 93 138-238 43-149 (255)
492 KOG1207 Diacetyl reductase/L-x 94.7 0.21 4.6E-06 39.0 7.5 80 139-218 6-87 (245)
493 PRK13255 thiopurine S-methyltr 94.7 0.22 4.8E-06 41.2 8.2 99 136-237 34-154 (218)
494 PRK00811 spermidine synthase; 94.6 0.35 7.6E-06 41.8 9.7 94 138-238 75-191 (283)
495 PF13241 NAD_binding_7: Putati 94.6 0.2 4.3E-06 36.0 6.9 86 139-239 6-92 (103)
496 PF04321 RmlD_sub_bind: RmlD s 94.6 0.094 2E-06 45.4 6.2 32 142-173 2-33 (286)
497 PRK14178 bifunctional 5,10-met 94.6 0.44 9.6E-06 40.7 9.9 77 139-241 151-227 (279)
498 PF01118 Semialdhyde_dh: Semia 94.6 0.13 2.7E-06 38.2 6.0 89 142-239 1-98 (121)
499 TIGR01181 dTDP_gluc_dehyt dTDP 94.6 0.16 3.5E-06 44.2 7.8 76 142-218 1-83 (317)
500 PRK05708 2-dehydropantoate 2-r 94.6 0.19 4.2E-06 43.9 8.1 95 141-238 3-104 (305)
No 1
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=7.6e-58 Score=388.73 Aligned_cols=305 Identities=36% Similarity=0.534 Sum_probs=278.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++.+++++ +++++.+.|+|+++||+|+|.|+|+|++|++.+.|.++... +|.+||||.+|+|+++|+++++|+
T Consensus 4 mkA~~~~~~~~p--l~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~-~P~ipGHEivG~V~~vG~~V~~~k 80 (339)
T COG1064 4 MKAAVLKKFGQP--LEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPK-LPLIPGHEIVGTVVEVGEGVTGLK 80 (339)
T ss_pred eEEEEEccCCCC--ceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCC-CCccCCcceEEEEEEecCCCccCC
Confidence 899999999988 99999999999999999999999999999999999998776 899999999999999999999999
Q ss_pred CCCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||||.. +..+|+|+||+++++.+++++|+++++++||.+.+++.|.|++|
T Consensus 81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~al- 159 (339)
T COG1064 81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRAL- 159 (339)
T ss_pred CCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeeh-
Confidence 9999963 12379999999999999999999999999999999999999999
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
..++++||++|+|+|+ |++|++++|+|+.+|++|+++++++++++.++++|++++++.++.+....+.+. +|++
T Consensus 160 k~~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~-----~d~i 233 (339)
T COG1064 160 KKANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEI-----ADAI 233 (339)
T ss_pred hhcCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhh-----CcEE
Confidence 5589999999999999 799999999999999999999999999999999999999997766666666553 9999
Q ss_pred EeCCChHHHHHhhccccCCCEEEEEeccC-CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487 213 LDCMGASYFQRNLGSLNIDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 213 i~~~g~~~~~~~~~~l~~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 291 (325)
++|++...+..+++.|+++|+++++|.+. .....++...+..+++++.|+...++. .+++++++..+|+
T Consensus 234 i~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~----------d~~e~l~f~~~g~ 303 (339)
T COG1064 234 IDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRA----------DLEEALDFAAEGK 303 (339)
T ss_pred EECCChhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHH----------HHHHHHHHHHhCC
Confidence 99999667899999999999999999885 444567788888999999999887653 2233899999999
Q ss_pred cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++.+.+.++++++++|++.|++++..|++|+++
T Consensus 304 Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~ 337 (339)
T COG1064 304 IKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337 (339)
T ss_pred ceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecC
Confidence 9999888999999999999999999999999875
No 2
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=100.00 E-value=2.2e-55 Score=383.09 Aligned_cols=321 Identities=43% Similarity=0.700 Sum_probs=291.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+.++++++++.|.|.|.++||+|||.++|||+.|.....|..+....+|++||.|++|+|+++|+++++|+
T Consensus 1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~ 80 (326)
T COG0604 1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK 80 (326)
T ss_pred CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence 89999999999988999999999999999999999999999999999998555556799999999999999999999999
Q ss_pred CCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (325)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~ 157 (325)
+||+|+.+. .+|+|+||+.++++.++++|+++++++||+++..++|||++|....++++|++|||+|++|++|.+++
T Consensus 81 ~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~ai 160 (326)
T COG0604 81 VGDRVAALGGVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI 160 (326)
T ss_pred CCCEEEEccCCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHH
Confidence 999999996 67999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred HHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEE
Q 020487 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (325)
|+|+++|+++++++.++++.+.++++|+++++++.+.++.+.+++.++++++|+|+|++|++.+...+.+|+++|+++.+
T Consensus 161 QlAk~~G~~~v~~~~s~~k~~~~~~lGAd~vi~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~i 240 (326)
T COG0604 161 QLAKALGATVVAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSI 240 (326)
T ss_pred HHHHHcCCcEEEEecCHHHHHHHHhcCCCEEEcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEE
Confidence 99999998888888788888899999999999999988999999999999999999999999999999999999999999
Q ss_pred eccC-CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-
Q 020487 238 GTQG-GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS- 315 (325)
Q Consensus 238 g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~- 315 (325)
|... .....++...++.+.+...+...... +. +...+.++++++++.+|.+++.+..+|++++..++..+....
T Consensus 241 g~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~---~~-~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~ 316 (326)
T COG0604 241 GALSGGPPVPLNLLPLLGKRLTLRGVTLGSR---DP-EALAEALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLER 316 (326)
T ss_pred ecCCCCCccccCHHHHhhccEEEEEecceec---ch-HHHHHHHHHHHHHHHcCCCcceeccEechhhhHHHHHHHHccc
Confidence 9987 34455667777778888888876655 12 566778888999999999999999999999977776655444
Q ss_pred CCceeEEEeC
Q 020487 316 QHIGKIMLVP 325 (325)
Q Consensus 316 ~~~gkvvi~~ 325 (325)
+..||+|+.|
T Consensus 317 ~~~GKvvl~~ 326 (326)
T COG0604 317 RTTGKVVLKV 326 (326)
T ss_pred CCcceEEEeC
Confidence 8889999975
No 3
>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=1.4e-51 Score=327.46 Aligned_cols=321 Identities=33% Similarity=0.529 Sum_probs=295.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
|.+++++.|..+++++++.|.|+|+++|++||..|+|+|..|..+..|-+. +...|++||-|.+|+|+++|+.++++++
T Consensus 10 k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~-~~plPytpGmEaaGvVvAvG~gvtdrkv 88 (336)
T KOG1197|consen 10 KCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYD-PAPLPYTPGMEAAGVVVAVGEGVTDRKV 88 (336)
T ss_pred eEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccC-CCCCCcCCCcccceEEEEecCCcccccc
Confidence 678999999999999999999999999999999999999999999999885 3346999999999999999999999999
Q ss_pred CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (325)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~ 161 (325)
||+|.-+.+.|.|+++..+|...++++|+.+++.+||++...++|||..+++.-+++||++||++.|.|++|++++|+++
T Consensus 89 GDrVayl~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~r 168 (336)
T KOG1197|consen 89 GDRVAYLNPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLR 168 (336)
T ss_pred ccEEEEeccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHH
Confidence 99999998889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
..|++++++..+.++++.+++.|+++.++++.+++.+.+.+.++++|+|+++|.+|.+.+...+.+|++.|.+|++|...
T Consensus 169 a~~a~tI~~asTaeK~~~akenG~~h~I~y~~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~as 248 (336)
T KOG1197|consen 169 AVGAHTIATASTAEKHEIAKENGAEHPIDYSTEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNAS 248 (336)
T ss_pred hcCcEEEEEeccHHHHHHHHhcCCcceeeccchhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEecccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 020487 242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 321 (325)
+...+++..++..+++++.-.++..+. +....+.....+++.++-+|.+++.|.++|||+++.+|..+++++++.||+
T Consensus 249 gl~~p~~l~~ls~k~l~lvrpsl~gYi--~g~~el~~~v~rl~alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkv 326 (336)
T KOG1197|consen 249 GLIDPIPLNQLSPKALQLVRPSLLGYI--DGEVELVSYVARLFALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKV 326 (336)
T ss_pred CCCCCeehhhcChhhhhhccHhhhccc--CCHHHHHHHHHHHHHHhhcCccceeeeeecchHHHHHHHHHHHhhhccceE
Confidence 877777777777777776654443332 222344556667889999999999999999999999999999999999999
Q ss_pred EEeC
Q 020487 322 MLVP 325 (325)
Q Consensus 322 vi~~ 325 (325)
++.|
T Consensus 327 lLlp 330 (336)
T KOG1197|consen 327 LLLP 330 (336)
T ss_pred EEeC
Confidence 9875
No 4
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=6.9e-49 Score=323.07 Aligned_cols=306 Identities=26% Similarity=0.389 Sum_probs=266.4
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
++|.+..+++...+++.+++.|+|.++||+|++.|+|||++|++.+.|.++. ..+|.++|||.+|+|+++|+++++|++
T Consensus 11 ~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~-s~~PlV~GHEiaG~VvkvGs~V~~~ki 89 (360)
T KOG0023|consen 11 FGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGL-SKYPLVPGHEIAGVVVKVGSNVTGFKI 89 (360)
T ss_pred EEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCc-ccCCccCCceeeEEEEEECCCcccccc
Confidence 5788888888666888999999999999999999999999999999999998 678999999999999999999999999
Q ss_pred CCEEEE-------------------Ec-----------C-----CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487 82 GDQVCA-------------------LL-----------G-----GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 82 Gd~V~~-------------------~~-----------~-----~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (325)
||+|-. +| . .|+|++|+++++.+++++|++++++.||.+.++..|
T Consensus 90 GD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGIT 169 (360)
T KOG0023|consen 90 GDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGIT 169 (360)
T ss_pred cCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceE
Confidence 999831 11 1 366999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHHHHHHcCCCEEEeCC-CchHHHHHHHHh
Q 020487 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLAVCKDLGADVCINYK-TEDFVARVKEET 204 (325)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~ 204 (325)
.|.+| .+.++.||+++.|.|+ |++|.+++|+|+++|.+|++++++. ++.+.++.+|++..++.. +.++...+.+.+
T Consensus 170 vYspL-k~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~ 247 (360)
T KOG0023|consen 170 VYSPL-KRSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTT 247 (360)
T ss_pred Eeehh-HHcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhh
Confidence 99999 6778889999999999 5599999999999999999999988 455666779999988887 677777777766
Q ss_pred CCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 284 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
.+ ++|-+.+. ....+..+++.|+++|++|++|.+.. ...++..++..+.+++.|+.++.+.. .+| ++
T Consensus 248 dg-~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~-~~~~~~~~lil~~~~I~GS~vG~~ke------t~E----~L 314 (360)
T KOG0023|consen 248 DG-GIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK-PLKLDTFPLILGRKSIKGSIVGSRKE------TQE----AL 314 (360)
T ss_pred cC-cceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC-cccccchhhhcccEEEEeeccccHHH------HHH----HH
Confidence 43 45555544 34557888999999999999998876 67788888899999999999887642 223 88
Q ss_pred HHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 285 PAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 285 ~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+++.++.+++.+ +..+++++++|+++|++++..+|.|++
T Consensus 315 df~a~~~ik~~I-E~v~~~~v~~a~erm~kgdV~yRfVvD 353 (360)
T KOG0023|consen 315 DFVARGLIKSPI-ELVKLSEVNEAYERMEKGDVRYRFVVD 353 (360)
T ss_pred HHHHcCCCcCce-EEEehhHHHHHHHHHHhcCeeEEEEEE
Confidence 999999998887 888999999999999999999999886
No 5
>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2e-48 Score=321.13 Aligned_cols=308 Identities=23% Similarity=0.331 Sum_probs=262.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEecCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVS 77 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~ 77 (325)
|+|+++..+++ +++++.|.|++ .|+||+|++.+.|||++|.|.+........ .-|+++|||.+|+|.++|++|+
T Consensus 5 ~~A~vl~g~~d---i~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk 81 (354)
T KOG0024|consen 5 NLALVLRGKGD---IRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVK 81 (354)
T ss_pred cceeEEEccCc---eeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccc
Confidence 68999998877 99999999997 899999999999999999999987654332 3589999999999999999999
Q ss_pred CCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHH
Q 020487 78 RWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS 129 (325)
Q Consensus 78 ~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (325)
++++||||..-. .+|++++|++.+++.+++||++++++++| |..+.+++|+
T Consensus 82 ~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLsV~~H 160 (354)
T KOG0024|consen 82 HLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLSVGVH 160 (354)
T ss_pred ccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcc-cccchhhhhh
Confidence 999999997311 25999999999999999999999999998 5556899999
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCc----hHHHHHHHHh
Q 020487 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE----DFVARVKEET 204 (325)
Q Consensus 130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~ 204 (325)
|+ +++++++|+++||+|+ |++|+.+...|+.+|+ +|++++..+.|++.++++|++.+.+.... .+.+.+....
T Consensus 161 Ac-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~ 238 (354)
T KOG0024|consen 161 AC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKAL 238 (354)
T ss_pred hh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhc
Confidence 99 8889999999999999 9999999999999999 89999999999999999999988766553 3445556667
Q ss_pred CCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
+...+|+.|||+|... ++.++..++.+|++++.| .+.+...++......+++.+.|++.+.... ++.+
T Consensus 239 g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg-~g~~~~~fpi~~v~~kE~~~~g~fry~~~~----------y~~a 307 (354)
T KOG0024|consen 239 GKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVG-MGAEEIQFPIIDVALKEVDLRGSFRYCNGD----------YPTA 307 (354)
T ss_pred cccCCCeEEEccCchHHHHHHHHHhccCCEEEEec-cCCCccccChhhhhhheeeeeeeeeecccc----------HHHH
Confidence 7677999999999765 688899999999977776 344566788888888999999987654432 2238
Q ss_pred HHHHHCCcc--ccccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487 284 WPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 325 (325)
++++++|++ ++++++.|+++++.+||+.+.+++. .-|+++.+
T Consensus 308 i~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~ 352 (354)
T KOG0024|consen 308 IELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITG 352 (354)
T ss_pred HHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeC
Confidence 999999996 4688999999999999999987774 23777653
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=100.00 E-value=3.6e-48 Score=322.50 Aligned_cols=308 Identities=26% Similarity=0.384 Sum_probs=273.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
+||++..++++| |+++++.+++|+++||+||+.++|+|++|....+|..|.. +|.++|||++|+|++||+.|+.++
T Consensus 3 ~~aAV~~~~~~P--l~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~--~P~vLGHEgAGiVe~VG~gVt~vk 78 (366)
T COG1062 3 TRAAVAREAGKP--LEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG--FPAVLGHEGAGIVEAVGEGVTSVK 78 (366)
T ss_pred ceEeeeecCCCC--eEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC--CceecccccccEEEEecCCccccC
Confidence 479999999988 9999999999999999999999999999999999999876 799999999999999999999999
Q ss_pred CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (325)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (325)
+||+|+... ..++|++|.++++.++++++++.
T Consensus 79 pGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~ 158 (366)
T COG1062 79 PGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA 158 (366)
T ss_pred CCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence 999997422 01489999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (325)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
+++.++.+.+..+|.+.+..+.+++++|+++.|.|. |.+|++++|-|+..|+ ++++++.+++++++++++|+.+++|.
T Consensus 159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~ 237 (366)
T COG1062 159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNP 237 (366)
T ss_pred CccceEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecc
Confidence 999999999999999999989999999999999999 9999999999999999 89999999999999999999999998
Q ss_pred CCc-hHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487 192 KTE-DFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS 268 (325)
Q Consensus 192 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (325)
++. +..+.+.+.+++ ++|.+|||+|.. .+..+++++.++|+.+.+|.... ...+.+..++... .++.|+......
T Consensus 238 ~~~~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~ 315 (366)
T COG1062 238 KEVDDVVEAIVELTDG-GADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGAR 315 (366)
T ss_pred hhhhhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCc
Confidence 876 588888898886 899999999975 46888999999999999998775 3455666666644 889998877553
Q ss_pred chhHHHHHHHHHHHHHHHHHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEE
Q 020487 269 TENKALIVSEVEKNVWPAIAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIM 322 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvv 322 (325)
.+ ..+..++++..+|+| +.++++.++|+|+++||+.|.+++....+|
T Consensus 316 p~-------~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~IR~Vi 364 (366)
T COG1062 316 PR-------SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSIRSVI 364 (366)
T ss_pred cc-------cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCceeeEEe
Confidence 21 123338899999985 568899999999999999999999875444
No 7
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=100.00 E-value=3.4e-47 Score=341.17 Aligned_cols=312 Identities=26% Similarity=0.354 Sum_probs=270.5
Q ss_pred CEEEEEcCCCC------CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecC
Q 020487 1 MKAIVITQPGS------PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGK 74 (325)
Q Consensus 1 m~a~~~~~~~~------~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~ 74 (325)
|||+++.++|. ++.+++++.+.|+|+++||+||+.+++||++|++.+.|..+. .+|.++|||++|+|+++|+
T Consensus 1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~GhE~~G~V~~vG~ 78 (371)
T cd08281 1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRPR--PLPMALGHEAAGVVVEVGE 78 (371)
T ss_pred CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCCC--CCCccCCccceeEEEEeCC
Confidence 99999998875 367999999999999999999999999999999999887643 3588999999999999999
Q ss_pred CCCCCCCCCEEEEEcC------------------------------------------------CceeeeEEeecCCcee
Q 020487 75 NVSRWKVGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVL 106 (325)
Q Consensus 75 ~~~~~~~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~ 106 (325)
+++++++||+|+.... .|+|++|+.++++.++
T Consensus 79 ~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~ 158 (371)
T cd08281 79 GVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV 158 (371)
T ss_pred CCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence 9999999999986310 2689999999999999
Q ss_pred eCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCC
Q 020487 107 PVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGA 185 (325)
Q Consensus 107 ~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~ 185 (325)
++|+++++++++.+.++..+||.++.+...+++|++|+|+|+ |++|++++|+|+..|+ +|++++.++++++.++++|+
T Consensus 159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga 237 (371)
T cd08281 159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGA 237 (371)
T ss_pred ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCC
Confidence 999999999999999999999999878888999999999996 9999999999999999 69999999999999999999
Q ss_pred CEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecc
Q 020487 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAG 263 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~ 263 (325)
+++++....++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|.... ....++...++.+++++.++.
T Consensus 238 ~~~i~~~~~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~ 316 (371)
T cd08281 238 TATVNAGDPNAVEQVRELTGG-GVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSY 316 (371)
T ss_pred ceEeCCCchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEe
Confidence 999988877778888888776 89999999986 467888999999999999987643 234566777888999999987
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 264 LRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
...... ++.++.+++++.+|+++. +++++|+++|+++|++.+++++..+|+|+
T Consensus 317 ~~~~~~-------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 317 MGSCVP-------RRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred cCCCCh-------HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 654321 123445789999999864 67899999999999999999998877663
No 8
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=100.00 E-value=1.8e-46 Score=331.02 Aligned_cols=317 Identities=27% Similarity=0.396 Sum_probs=270.1
Q ss_pred CEEEEEcCCCCC---cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487 1 MKAIVITQPGSP---EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (325)
Q Consensus 1 m~a~~~~~~~~~---~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (325)
|||+++..++.+ +.+++++.|.|.|+++||+||+.++++|++|++.+.|.++....+|.++|||++|+|+++|+++.
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~ 80 (324)
T cd08291 1 MKALLLEEYGKPLEVKELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPL 80 (324)
T ss_pred CeEEEEeecCCCccccEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCcc
Confidence 899999988866 56889999999999999999999999999999999887754445688999999999999999998
Q ss_pred C-CCCCCEEEEEcC-CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEE-cCCchHHH
Q 020487 78 R-WKVGDQVCALLG-GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVH-GGSSGIGT 154 (325)
Q Consensus 78 ~-~~~Gd~V~~~~~-~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~-g~~g~~G~ 154 (325)
. |++||+|+++.. +|+|++|++++++.++++|++++++++++++....+||.++ ....+ ++++++|+ +++|.+|+
T Consensus 81 ~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~~~g~g~vG~ 158 (324)
T cd08291 81 AQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGML-ETARE-EGAKAVVHTAAASALGR 158 (324)
T ss_pred ccCCCCCEEEecCCCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHH-Hhhcc-CCCcEEEEccCccHHHH
Confidence 6 999999998764 39999999999999999999999999998888889998554 55555 45556665 77899999
Q ss_pred HHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEE
Q 020487 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (325)
Q Consensus 155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (325)
+++|+|+.+|++|+++++++++++.++++|++++++....++.+.+++.++++++|++|||+|.......+++++++|++
T Consensus 159 ~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~ 238 (324)
T cd08291 159 MLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTL 238 (324)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEE
Confidence 99999999999999999999999999999999999988888888888888878899999999998888889999999999
Q ss_pred EEEeccCCccc-ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHH
Q 020487 235 FIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME 313 (325)
Q Consensus 235 v~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~ 313 (325)
+.+|....... .++...++.+++++.++....+..... .+.++.+.+++. +.+++.++++|+++|+++|++.+.
T Consensus 239 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~~~~i~~~~~l~~~~~a~~~~~ 313 (324)
T cd08291 239 YVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLG----PEVVKKLKKLVK-TELKTTFASRYPLALTLEAIAFYS 313 (324)
T ss_pred EEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccC----HHHHHHHHHHHh-CccccceeeEEcHHHHHHHHHHHH
Confidence 99987654332 255566777899998887654432111 234555777777 889999999999999999999999
Q ss_pred hCCCceeEEEe
Q 020487 314 SSQHIGKIMLV 324 (325)
Q Consensus 314 ~~~~~gkvvi~ 324 (325)
+++..||++++
T Consensus 314 ~~~~~Gkvv~~ 324 (324)
T cd08291 314 KNMSTGKKLLI 324 (324)
T ss_pred hCCCCCeEEeC
Confidence 99999999874
No 9
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=100.00 E-value=5.6e-46 Score=329.95 Aligned_cols=306 Identities=27% Similarity=0.394 Sum_probs=260.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++ .+++++.+.|+|+++||+||+.++++|++|++.+.+.++....+|.++|||++|+|+++|++++.++
T Consensus 1 mka~~~~~~~---~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (339)
T cd08239 1 MRGAVFPGDR---TVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFR 77 (339)
T ss_pred CeEEEEecCC---ceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCC
Confidence 9999998654 3999999999999999999999999999999988776433223478999999999999999999999
Q ss_pred CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+... .+|+|++|+.++.+.++++|+++++++++++++++.+||+++
T Consensus 78 ~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l- 156 (339)
T cd08239 78 VGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHAL- 156 (339)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHH-
Confidence 999998642 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
....+++|++|+|+|+ |.+|++++|+|+.+|++ |+++++++++++.++++|++.+++++... .+.+.+.++++++|+
T Consensus 157 ~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 234 (339)
T cd08239 157 RRVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQDD-VQEIRELTSGAGADV 234 (339)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCcch-HHHHHHHhCCCCCCE
Confidence 5678899999999987 99999999999999998 99999999999999999999999887666 667777777778999
Q ss_pred EEeCCChHHH-HHhhccccCCCEEEEEeccCCcccccc-hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 212 ILDCMGASYF-QRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 212 vi~~~g~~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
+|||+|+... ..++++++++|+++.+|..... .++ ...++.+++++.++..... +.++.+++++.+
T Consensus 235 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~--~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~~~~~ 302 (339)
T cd08239 235 AIECSGNTAARRLALEAVRPWGRLVLVGEGGEL--TIEVSNDLIRKQRTLIGSWYFSV----------PDMEECAEFLAR 302 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc--ccCcHHHHHhCCCEEEEEecCCH----------HHHHHHHHHHHc
Confidence 9999998754 7789999999999999875432 233 2456678999988755322 133448899999
Q ss_pred Cccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 290 GKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 290 g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
|.++ ++++++|+++++++|++.+++++ .||+|+..
T Consensus 303 g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 303 HKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred CCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 9876 46789999999999999998865 68999863
No 10
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=100.00 E-value=1.1e-45 Score=329.95 Aligned_cols=311 Identities=21% Similarity=0.319 Sum_probs=267.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++.+++++ +++++.+.|+|+++||+||+.++|+|++|++.+.|..+. .+|.++|||++|+|+++|++++.|+
T Consensus 2 mka~~~~~~~~~--~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~~--~~p~i~G~e~~G~V~~vG~~v~~~~ 77 (358)
T TIGR03451 2 VRGVIARSKGAP--VELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIND--EFPFLLGHEAAGVVEAVGEGVTDVA 77 (358)
T ss_pred cEEEEEccCCCC--CEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCccc--cCCcccccceEEEEEEeCCCCcccC
Confidence 999999998876 888999999999999999999999999999999886543 3588999999999999999999999
Q ss_pred CCCEEEEEc----------------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccC
Q 020487 81 VGDQVCALL----------------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (325)
Q Consensus 81 ~Gd~V~~~~----------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (325)
+||+|+... .+|+|+||+.++++.++++|+++++++++.+
T Consensus 78 ~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l 157 (358)
T TIGR03451 78 PGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLL 157 (358)
T ss_pred CCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhh
Confidence 999997521 2488999999999999999999999999999
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (325)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (325)
++.+.++|.++.+...+++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++.++++|++++++....++.+.
T Consensus 158 ~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~ 236 (358)
T TIGR03451 158 GCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEA 236 (358)
T ss_pred cccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHH
Confidence 9999999988877888999999999986 9999999999999999 5999999999999999999999998887777888
Q ss_pred HHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccccccchhHHHHHH
Q 020487 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVS 277 (325)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 277 (325)
+.+.+++.++|++|||+|. ..+..++++++++|+++.+|..... ...++...++.+++++.+++...... +
T Consensus 237 i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-------~ 309 (358)
T TIGR03451 237 IRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLP-------E 309 (358)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCc-------H
Confidence 8888887789999999996 4578889999999999999976532 23456666777889988875432211 1
Q ss_pred HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 278 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 278 ~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+.++++++++.+|++++ +++++|+++|+++|++.+++++.. |+++.
T Consensus 310 ~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 310 RDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred HHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 23555889999999864 678999999999999999888775 66653
No 11
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=100.00 E-value=6.9e-46 Score=300.17 Aligned_cols=314 Identities=24% Similarity=0.341 Sum_probs=279.3
Q ss_pred EEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 2 KAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 2 ~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|++++...|+| ++++++..+.|..+.++|+||+++++|||+|+..++|.+|..+.+|.+-|.|++|+|+.+|+++++|+
T Consensus 21 kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs~vkgfk 100 (354)
T KOG0025|consen 21 KALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGSNVKGFK 100 (354)
T ss_pred ceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecCCcCccC
Confidence 78999999987 78999999999988888999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEEcCC-ceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487 81 VGDQVCALLGG-GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (325)
Q Consensus 81 ~Gd~V~~~~~~-g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~ 159 (325)
+||+|.....+ |.|++|.+.+++.++++++.++++.||++....||||..|.+...+++||+|+..||++.+|.+++|+
T Consensus 101 ~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQl 180 (354)
T KOG0025|consen 101 PGDWVIPLSANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQL 180 (354)
T ss_pred CCCeEeecCCCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHH
Confidence 99999987654 89999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCEEEEEecChhhHHHH----HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487 160 GKCQGVRVFVTAGSEEKLAVC----KDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 160 a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (325)
|++.|++-+.++|+....+++ +++||++++...+-.-.+..+.........+.++|+|+.....+.+.|..||..+
T Consensus 181 aka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~Ggtmv 260 (354)
T KOG0025|consen 181 AKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMV 260 (354)
T ss_pred HHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEE
Confidence 999999999999888877655 4699999986443222222222234457899999999999889999999999999
Q ss_pred EEeccCCcccccchHHHHhhccEeeecccccccchhH-HHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-ALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 314 (325)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~ 314 (325)
.+|++..++...+...++.+++.+.|+++..+...+. ++.+.+++..+.++...|++.....+..+|++...|++...+
T Consensus 261 TYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~ 340 (354)
T KOG0025|consen 261 TYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALS 340 (354)
T ss_pred EecCccCCCcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHH
Confidence 9999998888889999999999999999988765553 556778888899999999999988899999999999996644
Q ss_pred C
Q 020487 315 S 315 (325)
Q Consensus 315 ~ 315 (325)
.
T Consensus 341 ~ 341 (354)
T KOG0025|consen 341 K 341 (354)
T ss_pred H
Confidence 4
No 12
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=100.00 E-value=6.9e-45 Score=321.07 Aligned_cols=323 Identities=23% Similarity=0.334 Sum_probs=279.6
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|||+++..++.+ +.+++++.+.|.+.++||+|++.++++|++|++.+.|.++....+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~ 80 (324)
T cd08292 1 MRAAVHTQFGDPADVLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGL 80 (324)
T ss_pred CeeEEEccCCChhHeEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCC
Confidence 899999887765 4588999999999999999999999999999999988765433457889999999999999999999
Q ss_pred CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (325)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~ 159 (325)
++||+|+++...|+|++|+.++...++++|+++++++++.++....++|+++ ...++++|++++|+|++|.+|++++++
T Consensus 81 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~ 159 (324)
T cd08292 81 QVGQRVAVAPVHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAML 159 (324)
T ss_pred CCCCEEEeccCCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHH
Confidence 9999999987679999999999999999999999999999998899999987 557899999999999999999999999
Q ss_pred HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
|+.+|++++++++++++.+.++++|++.+++.....+.+.+.+.++++++|++|||+|+..+...+++++++|+++.+|.
T Consensus 160 a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (324)
T cd08292 160 AAARGINVINLVRRDAGVAELRALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGS 239 (324)
T ss_pred HHHCCCeEEEEecCHHHHHHHHhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEec
Confidence 99999999999999999998888999899888888888888888988899999999999888888999999999999987
Q ss_pred cCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCce
Q 020487 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 319 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~g 319 (325)
.......++....+.+++++.++..........+....+.++.+++++.+|.+.+.+.+.|+++++++|++.+.+++..+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~~~~~~a~~~~~~~~~~~ 319 (324)
T cd08292 240 MSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDLGDAAKAAAASMRPGRAG 319 (324)
T ss_pred CCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecHHHHHHHHHHHHcCCCCc
Confidence 54333345555566789999888665432211123345567779999999999866778999999999999999888888
Q ss_pred eEEEe
Q 020487 320 KIMLV 324 (325)
Q Consensus 320 kvvi~ 324 (325)
|++++
T Consensus 320 kvvv~ 324 (324)
T cd08292 320 KVLLR 324 (324)
T ss_pred eEEeC
Confidence 99874
No 13
>PLN02740 Alcohol dehydrogenase-like
Probab=100.00 E-value=9.6e-45 Score=326.16 Aligned_cols=311 Identities=23% Similarity=0.310 Sum_probs=260.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++++ +++++.+.|+|.++||+||+.++|||++|++.+.|..+....+|.++|||++|+|+++|+++++|+
T Consensus 11 mka~~~~~~~~~--~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 88 (381)
T PLN02740 11 CKAAVAWGPGEP--LVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLK 88 (381)
T ss_pred eEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCcCC
Confidence 899999887754 788899999999999999999999999999999887654445688999999999999999999999
Q ss_pred CCCEEEEEc---------------------------------------------------CCceeeeEEeecCCceeeCC
Q 020487 81 VGDQVCALL---------------------------------------------------GGGGYAEKVAVPAGQVLPVP 109 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------------------------------~~g~~~~~~~~~~~~~~~~p 109 (325)
+||+|+... .+|+|+||++++.+.++++|
T Consensus 89 vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP 168 (381)
T PLN02740 89 AGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKID 168 (381)
T ss_pred CCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECC
Confidence 999998632 14899999999999999999
Q ss_pred CCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEE
Q 020487 110 SGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVC 188 (325)
Q Consensus 110 ~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~ 188 (325)
+++++++++.+.+++.++|.++.+.+++++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++.+
T Consensus 169 ~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~ 247 (381)
T PLN02740 169 PNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDF 247 (381)
T ss_pred CCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEE
Confidence 999999999999999999998877889999999999997 9999999999999999 69999999999999999999998
Q ss_pred EeCCCc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCc-ccccchHHHHhhccEeeecc
Q 020487 189 INYKTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQAAG 263 (325)
Q Consensus 189 ~~~~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~ 263 (325)
++.... ++.+.+.+.+++ ++|++|||+|. ..+..++.+++++ |+++.+|..... ...++...+ .+++++.|+.
T Consensus 248 i~~~~~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~-~~~~~i~g~~ 325 (381)
T PLN02740 248 INPKDSDKPVHERIREMTGG-GVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMEL-FDGRSITGSV 325 (381)
T ss_pred EecccccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHH-hcCCeEEEEe
Confidence 887653 366777777776 89999999997 4578888999896 999999976532 122333333 3678888876
Q ss_pred cccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 264 LRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
...+... ..++.+++++.+|.++. +++++|+|+|+++|++.+.+++. .|++|.
T Consensus 326 ~~~~~~~-------~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 326 FGDFKGK-------SQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred cCCCCcH-------HHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 5543211 12344888899998754 67899999999999999988776 488875
No 14
>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3e-45 Score=300.15 Aligned_cols=310 Identities=25% Similarity=0.323 Sum_probs=268.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
+||++.+++++| |.++++..++|+.+||+||+.++++|++|...++|..+ ...+|.++|||.+|+|+++|+.++.++
T Consensus 8 CKAAV~w~a~~P--L~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~-~~~fP~IlGHEaaGIVESvGegV~~vk 84 (375)
T KOG0022|consen 8 CKAAVAWEAGKP--LVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDP-EGLFPVILGHEAAGIVESVGEGVTTVK 84 (375)
T ss_pred EeEeeeccCCCC--eeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCc-cccCceEecccceeEEEEecCCccccC
Confidence 589999999998 99999999999999999999999999999999999884 345799999999999999999999999
Q ss_pred CCCEEEEEcC-------------------------------------------------CceeeeEEeecCCceeeCCCC
Q 020487 81 VGDQVCALLG-------------------------------------------------GGGYAEKVAVPAGQVLPVPSG 111 (325)
Q Consensus 81 ~Gd~V~~~~~-------------------------------------------------~g~~~~~~~~~~~~~~~~p~~ 111 (325)
+||+|+.+.. ..+|+||.+++...++++++.
T Consensus 85 ~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~ 164 (375)
T KOG0022|consen 85 PGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPS 164 (375)
T ss_pred CCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCC
Confidence 9999985320 147999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (325)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
.+++.++.|.+..+|+|.|..+.++++||+++.|+|- |.+|+++++-|+..|+ +++.++-++++.+.++++|+.+++|
T Consensus 165 aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iN 243 (375)
T KOG0022|consen 165 APLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFIN 243 (375)
T ss_pred CChhheeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecC
Confidence 9999999999999999999999999999999999998 9999999999999999 9999999999999999999999998
Q ss_pred CCC--chHHHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeecccc
Q 020487 191 YKT--EDFVARVKEETGGKGVDVILDCMGASY-FQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLR 265 (325)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~ 265 (325)
..+ ....+.+++.+++ ++|.-|+|+|... +.+++.+.++| |.-+.+|.... ...+..+.+++ .+.++.|+..+
T Consensus 244 p~d~~~~i~evi~EmTdg-GvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FG 321 (375)
T KOG0022|consen 244 PKDLKKPIQEVIIEMTDG-GVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFG 321 (375)
T ss_pred hhhccccHHHHHHHHhcC-CceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecc
Confidence 773 3467888888884 8999999999865 58888888888 99999998775 34555666655 57888888777
Q ss_pred cccchhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 266 SRSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.+..+. .+..+.+...+++ ++.++++.++++++++||+.|.+++.. |.|+.
T Consensus 322 G~K~~~-------~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 322 GFKSKS-------DIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred cccchh-------hhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 654322 2222555555565 567899999999999999999999988 66654
No 15
>PLN02827 Alcohol dehydrogenase-like
Probab=100.00 E-value=2.7e-44 Score=322.44 Aligned_cols=308 Identities=22% Similarity=0.257 Sum_probs=258.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+++ .+++++.+.|+|+++||+|||.++|||++|++.+.+.. .+|.++|||++|+|+++|++++.|+
T Consensus 13 mka~~~~~~~~--~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~----~~p~i~GhE~~G~V~~vG~~v~~~~ 86 (378)
T PLN02827 13 CRAAVAWGAGE--ALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA----LFPRIFGHEASGIVESIGEGVTEFE 86 (378)
T ss_pred eEEEEEecCCC--CceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC----CCCeeecccceEEEEEcCCCCcccC
Confidence 89999987653 38899999999999999999999999999999887642 2477999999999999999999999
Q ss_pred CCCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCC
Q 020487 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (325)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (325)
+||+|+.... +|+|++|+.+++..++++|+++
T Consensus 87 ~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l 166 (378)
T PLN02827 87 KGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA 166 (378)
T ss_pred CCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence 9999987521 2789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (325)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
++++++.+.+++.++|.++....++++|++|+|+|+ |.+|++++|+|+.+|+ .|++++.++++.+.++++|++++++.
T Consensus 167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~ 245 (378)
T PLN02827 167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINP 245 (378)
T ss_pred CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcc
Confidence 999999888888999988767788999999999997 9999999999999999 57778889999999999999998887
Q ss_pred CC--chHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCC-CEEEEEeccCCcccccch-HHHHhhccEeeeccccc
Q 020487 192 KT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGAKTELNI-TSLFAKRLTVQAAGLRS 266 (325)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~-~~~~~~~~~i~~~~~~~ 266 (325)
.. ..+.+.+.+.+++ ++|++|||+|.. .+...++.++++ |+++.+|..... ..+.. ..++.+++++.|+....
T Consensus 246 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-~~~~~~~~~~~~~~~i~g~~~~~ 323 (378)
T PLN02827 246 NDLSEPIQQVIKRMTGG-GADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-PEVSAHYGLFLSGRTLKGSLFGG 323 (378)
T ss_pred cccchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-ccccccHHHHhcCceEEeeecCC
Confidence 65 3566677777765 899999999975 578889999998 999999876542 22322 34667899999876643
Q ss_pred ccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 267 RSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.. ...++++++++.+|++++ +++++|+|+++++|++.+++++. +|+||.+
T Consensus 324 ~~~-------~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~ 376 (378)
T PLN02827 324 WKP-------KSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHM 376 (378)
T ss_pred Cch-------hhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEe
Confidence 321 112344888999999887 78999999999999999998877 5888764
No 16
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=100.00 E-value=5.8e-44 Score=319.68 Aligned_cols=311 Identities=23% Similarity=0.337 Sum_probs=256.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+++. +++++.|.|+|.++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|+++++|+
T Consensus 2 ~~a~~~~~~~~~--l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~-~~p~i~GhE~~G~V~~vG~~v~~~~ 78 (368)
T TIGR02818 2 SRAAVAWAAGQP--LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEG-VFPVILGHEGAGIVEAVGEGVTSVK 78 (368)
T ss_pred ceEEEEecCCCC--eEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCC-CCCeeeccccEEEEEEECCCCccCC
Confidence 899998887654 8899999999999999999999999999999998876532 3588999999999999999999999
Q ss_pred CCCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCC
Q 020487 81 VGDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGV 112 (325)
Q Consensus 81 ~Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~ 112 (325)
+||+|+.... .|+|+||++++++.++++|+++
T Consensus 79 ~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l 158 (368)
T TIGR02818 79 VGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAA 158 (368)
T ss_pred CCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCC
Confidence 9999986420 2689999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (325)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
++++++.+++++.++|+++.+..++++|++|||+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++.
T Consensus 159 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~ 237 (368)
T TIGR02818 159 PLEEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNP 237 (368)
T ss_pred CHHHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcc
Confidence 999999999999999999877889999999999987 9999999999999999 79999999999999999999998886
Q ss_pred CC--chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487 192 KT--EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS 266 (325)
Q Consensus 192 ~~--~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~ 266 (325)
.+ ..+.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... .....+...++ ++..+.++....
T Consensus 238 ~~~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 315 (368)
T TIGR02818 238 NDYDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLV-TGRVWRGSAFGG 315 (368)
T ss_pred cccchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHh-ccceEEEeeccC
Confidence 64 3455667777775 89999999996 4568889999886 99999997642 22233333333 234455654332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 267 RSTENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
... .+.++++++++.+|+++ ++++++|+|+|+++|++.+++++. .|+++.+
T Consensus 316 ~~~-------~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 316 VKG-------RTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred CCc-------HHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 211 12344588999999875 567999999999999999987765 5988864
No 17
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=100.00 E-value=1.6e-44 Score=321.98 Aligned_cols=306 Identities=24% Similarity=0.321 Sum_probs=251.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||+..+...+..+.+++.+.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|++++.|+
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~-~~~p~i~GhE~~G~V~~vG~~v~~~~ 89 (360)
T PLN02586 11 QKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGF-TRYPIVPGHEIVGIVTKLGKNVKKFK 89 (360)
T ss_pred hheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCC-CCCCccCCcceeEEEEEECCCCCccC
Confidence 55555554444455888899999999999999999999999999998876542 24588999999999999999999999
Q ss_pred CCCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487 81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (325)
Q Consensus 81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (325)
+||+|+.. | .+|+|+||++++++.++++|+++++++++++.+.+.
T Consensus 90 vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ 169 (360)
T PLN02586 90 EGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGI 169 (360)
T ss_pred CCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchH
Confidence 99999731 1 158999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
++|+++.....+++|++|+|.|+ |++|++++|+|+.+|++|++++.+++++ ..++++|++++++.... +.+.+.+
T Consensus 170 ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~---~~~~~~~ 245 (360)
T PLN02586 170 TVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDP---EKMKAAI 245 (360)
T ss_pred HHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCH---HHHHhhc
Confidence 99999866666789999999887 9999999999999999998888776654 45578999988876543 2444544
Q ss_pred CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
+ ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.++..+.++..... +.++++
T Consensus 246 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~ 312 (360)
T PLN02586 246 G--TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEK-PLELPIFPLVLGRKLVGGSDIGGI----------KETQEM 312 (360)
T ss_pred C--CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCC-CCccCHHHHHhCCeEEEEcCcCCH----------HHHHHH
Confidence 4 699999999974 57888999999999999986543 345666677777877777754321 124458
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++++.+|++++.+ ++|+|+|+++|++.+.+++..||+|+.|
T Consensus 313 ~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 313 LDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred HHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 8999999998766 5899999999999999998889999875
No 18
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=100.00 E-value=1.5e-43 Score=317.66 Aligned_cols=309 Identities=21% Similarity=0.277 Sum_probs=259.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++++ +++++.+.|+|+++||+||+.+++||++|++.+.|..+. ..+|.++|||++|+|+++|++++.|+
T Consensus 3 ~ka~~~~~~~~~--~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (369)
T cd08301 3 CKAAVAWEAGKP--LVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQT-PLFPRILGHEAAGIVESVGEGVTDLK 79 (369)
T ss_pred cEEEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCC-CCCCcccccccceEEEEeCCCCCccc
Confidence 799999887655 899999999999999999999999999999999887652 34688999999999999999999999
Q ss_pred CCCEEEEEc-------------------------------------------------CCceeeeEEeecCCceeeCCCC
Q 020487 81 VGDQVCALL-------------------------------------------------GGGGYAEKVAVPAGQVLPVPSG 111 (325)
Q Consensus 81 ~Gd~V~~~~-------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~ 111 (325)
+||+|+.+. ..|+|+||+++++..++++|++
T Consensus 80 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~ 159 (369)
T cd08301 80 PGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPE 159 (369)
T ss_pred cCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCC
Confidence 999998641 1278999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (325)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
+++++++.+++.+.++|.++....++++|++|+|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++
T Consensus 160 ~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~ 238 (369)
T cd08301 160 APLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVN 238 (369)
T ss_pred CCHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEc
Confidence 9999999999999999998877788999999999987 9999999999999999 8999999999999999999998887
Q ss_pred CCC--chHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCC-CEEEEEeccCCc-ccccchHHHHhhccEeeecccc
Q 020487 191 YKT--EDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNID-GRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLR 265 (325)
Q Consensus 191 ~~~--~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~-g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~ 265 (325)
... ..+.+.+++.+++ ++|++|||+|.. .+..++++++++ |+++.+|..... ..+++...++ +++++.|+...
T Consensus 239 ~~~~~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~-~~~~i~g~~~~ 316 (369)
T cd08301 239 PKDHDKPVQEVIAEMTGG-GVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLL-NGRTLKGTLFG 316 (369)
T ss_pred ccccchhHHHHHHHHhCC-CCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHh-cCCeEEEEecC
Confidence 765 3456667777765 899999999865 467889999996 999999976532 2334444444 68899887654
Q ss_pred cccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 266 SRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
.+.. +..++.+++++.+|.++. +++++|+|+|+++|++.+++++.. |+++
T Consensus 317 ~~~~-------~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 317 GYKP-------KTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred CCCh-------HHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 4321 123444888888898654 578999999999999999988864 8876
No 19
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=100.00 E-value=8e-44 Score=316.21 Aligned_cols=301 Identities=20% Similarity=0.271 Sum_probs=247.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhh-CCCCC-CCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||++++..++. +++++.+.| +.++||+|||.++|||++|++.+. |..+. ...+|.++|||++|+|+++ ++++
T Consensus 5 ~~~~~~~~~~~---~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~ 78 (343)
T PRK09880 5 TQSCVVAGKKD---VAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG 78 (343)
T ss_pred ceEEEEecCCc---eEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence 57889886665 889999987 689999999999999999999875 43322 2246889999999999999 6788
Q ss_pred CCCCCEEEEE--------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487 79 WKVGDQVCAL--------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 79 ~~~Gd~V~~~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (325)
|++||+|... ..+|+|+||++++++.++++|+++++++++ +..++.+
T Consensus 79 ~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~~~~ 157 (343)
T PRK09880 79 LKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEPLAV 157 (343)
T ss_pred CCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcHHHH
Confidence 9999999742 125999999999999999999999987665 5667789
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (325)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (325)
+|+++. .....+|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|++++++++..++.+ +.+..
T Consensus 158 a~~al~-~~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~-~~~~~- 233 (343)
T PRK09880 158 AIHAAH-QAGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDH-YKAEK- 233 (343)
T ss_pred HHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHH-HhccC-
Confidence 999984 445668999999997 9999999999999999 699999999999999999999999877655432 22222
Q ss_pred CCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487 206 GKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 284 (325)
Q Consensus 206 ~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
.++|++|||+|.. .+..+++.++++|+++.+|.... ...++...++.+++++.++.... +.+++++
T Consensus 234 -g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~-----------~~~~~~~ 300 (343)
T PRK09880 234 -GYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA-PPEFPMMTLIVKEISLKGSFRFT-----------EEFNTAV 300 (343)
T ss_pred -CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CCccCHHHHHhCCcEEEEEeecc-----------ccHHHHH
Confidence 2599999999975 57888999999999999996543 34567777788899998875321 1244588
Q ss_pred HHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 285 PAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 285 ~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++.+|++++ +++++|+++|+++|++.+.+++..||+++.|
T Consensus 301 ~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 301 SWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred HHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 9999999875 6789999999999999999888789999986
No 20
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=100.00 E-value=2.9e-43 Score=315.47 Aligned_cols=310 Identities=26% Similarity=0.349 Sum_probs=256.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++...+++ +++++.|.|+|.++||+||+.++|+|++|++.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~-~~p~v~G~E~~G~V~~vG~~v~~~~ 79 (368)
T cd08300 3 CKAAVAWEAGKP--LSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEG-LFPVILGHEGAGIVESVGEGVTSVK 79 (368)
T ss_pred ceEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccC-CCCceeccceeEEEEEeCCCCccCC
Confidence 789988876654 8899999999999999999999999999999998876533 4688999999999999999999999
Q ss_pred CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (325)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (325)
+||+|+... ..|+|+||+.++++.++++|+++
T Consensus 80 vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l 159 (368)
T cd08300 80 PGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEA 159 (368)
T ss_pred CCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCC
Confidence 999998641 12589999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (325)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
++++++.+++++.++|+++.+...+++|++|+|+|+ |++|++++|+|+.+|+ +|+++++++++++.++++|+++++++
T Consensus 160 ~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~ 238 (368)
T cd08300 160 PLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNP 238 (368)
T ss_pred ChhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcc
Confidence 999999999999999999877788999999999986 9999999999999999 79999999999999999999999987
Q ss_pred CCc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCC-cccccchHHHHhhccEeeeccccc
Q 020487 192 KTE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRS 266 (325)
Q Consensus 192 ~~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~ 266 (325)
... ++.+.+.+.+++ ++|++|||+|. ..+..++++++++ |+++.+|.... .....+...+. .+..+.++....
T Consensus 239 ~~~~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~ 316 (368)
T cd08300 239 KDHDKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGG 316 (368)
T ss_pred cccchHHHHHHHHHhCC-CCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecc
Confidence 653 467777777775 89999999996 4678889999886 99999987642 22223333333 334555554433
Q ss_pred ccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 267 RSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+.. .+.++++++++.+|++++ +++++|+|+|+++|++.+.+++. .|++++
T Consensus 317 ~~~-------~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 317 WKS-------RSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred cCc-------HHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 221 123445889999999875 57899999999999999988765 588764
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.3e-43 Score=317.03 Aligned_cols=305 Identities=24% Similarity=0.323 Sum_probs=252.2
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||+.+...+.+..+++.+.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++++|++
T Consensus 6 ~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~-~~~p~i~GhE~aG~Vv~vG~~v~~~~v 84 (375)
T PLN02178 6 KAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGF-SRYPIIPGHEIVGIATKVGKNVTKFKE 84 (375)
T ss_pred eeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCC-CCCCcccCceeeEEEEEECCCCCccCC
Confidence 5555555555555888899999999999999999999999999999886532 235789999999999999999999999
Q ss_pred CCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487 82 GDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 82 Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (325)
||+|+.. | .+|+|+||++++++.++++|+++++++++++++...+
T Consensus 85 GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~t 164 (375)
T PLN02178 85 GDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGIT 164 (375)
T ss_pred CCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchH
Confidence 9999741 1 1589999999999999999999999999999999999
Q ss_pred HHHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487 127 VWSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 127 a~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
+|+++..... .++|++++|.|+ |++|++++|+|+.+|++|++++.++++ .+.++++|++++++.... +.+.+.+
T Consensus 165 a~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~---~~v~~~~ 240 (375)
T PLN02178 165 VYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDS---QKMKEAV 240 (375)
T ss_pred HHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCH---HHHHHhh
Confidence 9998854433 368999999997 999999999999999999998877554 677789999998876542 3455555
Q ss_pred CCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
+ ++|++|||+|.. .+..++++++++|+++.+|.... ...++...++.+++++.|+..... +.++++
T Consensus 241 ~--~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~ 307 (375)
T PLN02178 241 G--TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEK-PLDLPIFPLVLGRKMVGGSQIGGM----------KETQEM 307 (375)
T ss_pred C--CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCC-CCccCHHHHHhCCeEEEEeCccCH----------HHHHHH
Confidence 4 699999999976 56888999999999999987643 345667777788999988765432 123448
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++++.+|++++.+ +.|+|+|+++|++.+.+++..||+|+.|
T Consensus 308 ~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 348 (375)
T PLN02178 308 LEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDV 348 (375)
T ss_pred HHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEe
Confidence 8999999998776 6799999999999999999889999875
No 22
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-43 Score=312.14 Aligned_cols=310 Identities=23% Similarity=0.283 Sum_probs=253.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|||+++..++. +++++.+.|+| .++||+||+.++++|++|++.+..... ..+|.++|||++|+|+++|++++.|
T Consensus 1 Mka~~~~~~~~---~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~~~p~i~G~e~~G~V~~vG~~v~~~ 75 (347)
T PRK10309 1 MKSVVNDTDGI---VRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--HYYPITLGHEFSGYVEAVGSGVDDL 75 (347)
T ss_pred CceEEEeCCCc---eEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--CCCCcccccceEEEEEEeCCCCCCC
Confidence 89999997664 89999999997 599999999999999999975432211 1247899999999999999999999
Q ss_pred CCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 80 KVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 80 ~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
++||+|+.+. .+|+|++|+.++++.++++|+++++++++.+. +.++++.++
T Consensus 76 ~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~~~- 153 (347)
T PRK10309 76 HPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLHAF- 153 (347)
T ss_pred CCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHHHH-
Confidence 9999998752 25899999999999999999999999988764 456677775
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc-
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD- 210 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d- 210 (325)
....++++++++|+|+ |.+|++++|+|+.+|++ |+++++++++++.++++|++++++.+... .+.+.+.+.+.++|
T Consensus 154 ~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~-~~~~~~~~~~~~~d~ 231 (347)
T PRK10309 154 HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSREMS-APQIQSVLRELRFDQ 231 (347)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcccC-HHHHHHHhcCCCCCe
Confidence 5677899999999986 99999999999999996 78888899999999999999998877655 55677777767888
Q ss_pred EEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccc---hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHH
Q 020487 211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 286 (325)
Q Consensus 211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
++|||+|.. .+..++++++++|+++.+|..... .+++ +..++.+++++.|+......... .+.+++++++
T Consensus 232 ~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-----~~~~~~~~~~ 305 (347)
T PRK10309 232 LILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-LHLTSATFGKILRKELTVIGSWMNYSSPWP-----GQEWETASRL 305 (347)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-cccChhhhhHHhhcCcEEEEEeccccCCcc-----hhHHHHHHHH
Confidence 999999975 568889999999999999976542 1222 23567788999987654221111 1234458889
Q ss_pred HHCCcc--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 287 IAVGKV--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 287 ~~~g~l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.+|.+ +++++++|+|+|+++|++.+.+++..||+|+.+
T Consensus 306 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 306 LTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 999987 467899999999999999999988889999875
No 23
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=100.00 E-value=2.4e-43 Score=310.88 Aligned_cols=298 Identities=23% Similarity=0.291 Sum_probs=249.6
Q ss_pred EEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 3 AIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 3 a~~~~~~~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|+.+..+|.+ ..+++++.|.|+|.++||+||+.++|+|++|.+.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus 1 ~~~~~~~g~~~~~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 79 (329)
T TIGR02822 1 AWEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVH-RPRVTPGHEVVGEVAGRGADAGGFA 79 (329)
T ss_pred CeeeecCCcCCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCC-CCCccCCcceEEEEEEECCCCcccC
Confidence 3556666654 469999999999999999999999999999999998876532 2468999999999999999999999
Q ss_pred CCCEEEEE----------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCAL----------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~~----------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+.. ..+|+|++|+.+++..++++|+++++++++.+++.+.+||+++
T Consensus 80 ~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~- 158 (329)
T TIGR02822 80 VGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRAL- 158 (329)
T ss_pred CCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHH-
Confidence 99999741 1258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
...++++|++++|+|+ |++|++++|+|+..|++|+++++++++++.++++|++++++..... .+++|++
T Consensus 159 ~~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~----------~~~~d~~ 227 (329)
T TIGR02822 159 LRASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAASAGGAYDTP----------PEPLDAA 227 (329)
T ss_pred HhcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHhCCceeccccccC----------cccceEE
Confidence 4678999999999998 9999999999999999999999999999999999999988743211 1368988
Q ss_pred EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 291 (325)
+++.+. ..+..++++++++|+++.+|........++...++.+++++.++..... +.+.++++++.+|+
T Consensus 228 i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~~~l~~~g~ 297 (329)
T TIGR02822 228 ILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTR----------ADAREFLELAAQHG 297 (329)
T ss_pred EECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCH----------HHHHHHHHHHHhCC
Confidence 887764 4568889999999999999975433334566666778888888753211 12344788999999
Q ss_pred cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
++ +++++|+|+|+++|++.+.+++..||+|+.
T Consensus 298 i~-~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~ 329 (329)
T TIGR02822 298 VR-VTTHTYPLSEADRALRDLKAGRFDGAAVLV 329 (329)
T ss_pred Ce-eEEEEEeHHHHHHHHHHHHcCCCceEEEeC
Confidence 87 457899999999999999999999999873
No 24
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=100.00 E-value=8.9e-43 Score=311.93 Aligned_cols=308 Identities=25% Similarity=0.333 Sum_probs=257.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++...+++ +++++.|.|.|.++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|+++++++
T Consensus 3 ~ka~~~~~~~~~--~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~--~~~p~i~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08277 3 CKAAVAWEAGKP--LVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA--TLFPVILGHEGAGIVESVGEGVTNLK 78 (365)
T ss_pred cEEEEEccCCCC--cEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC--CCCCeecccceeEEEEeeCCCCccCC
Confidence 689988876654 88999999999999999999999999999999988765 34578999999999999999999999
Q ss_pred CCCEEEEEc-----------------------------------------------CCceeeeEEeecCCceeeCCCCCC
Q 020487 81 VGDQVCALL-----------------------------------------------GGGGYAEKVAVPAGQVLPVPSGVS 113 (325)
Q Consensus 81 ~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~~ 113 (325)
+||+|+... ..|+|+||+.++.+.++++|++++
T Consensus 79 ~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~ 158 (365)
T cd08277 79 PGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP 158 (365)
T ss_pred CCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence 999998741 137899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCC
Q 020487 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYK 192 (325)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (325)
+++++.+..++.+||+++.+..++++|++++|+|+ |.+|++++++|+.+|+ +|+++++++++++.++++|++++++..
T Consensus 159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~ 237 (365)
T cd08277 159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPK 237 (365)
T ss_pred HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccc
Confidence 99999999999999998877888999999999986 9999999999999999 799999999999999999999888766
Q ss_pred Cc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCC-CEEEEEeccCCcccccchHHHHhhccEeeeccccccc
Q 020487 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNID-GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS 268 (325)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~-g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (325)
.. .+.+.+.+.++ .++|++|||+|. ..+..++++++++ |+++.+|...+...+++...+.. ++++.++....+.
T Consensus 238 ~~~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~ 315 (365)
T cd08277 238 DSDKPVSEVIREMTG-GGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFK 315 (365)
T ss_pred cccchHHHHHHHHhC-CCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCC
Confidence 53 34566777776 589999999995 4568889999885 99999987653333445545553 7888887654432
Q ss_pred chhHHHHHHHHHHHHHHHHHCCccc--cccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 269 TENKALIVSEVEKNVWPAIAVGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
. ...++.+++++.++.++ ++++++|+|+|+++|++.+++++. .|+++
T Consensus 316 ~-------~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~i 364 (365)
T cd08277 316 S-------RSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGEC-IRTVI 364 (365)
T ss_pred h-------HHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCCC-ceEee
Confidence 1 11234488888888754 578899999999999999988774 58876
No 25
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=100.00 E-value=7.9e-43 Score=313.45 Aligned_cols=307 Identities=20% Similarity=0.329 Sum_probs=241.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-------CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEec
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIK-------DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVG 73 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~-------~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG 73 (325)
|||+++..+++ +++++.+.|+|+ ++||+|||.++|||++|++.+.|..+. .+|.++|||++|+|+++|
T Consensus 3 mka~v~~~~~~---~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~~--~~p~i~GhE~~G~V~~vG 77 (393)
T TIGR02819 3 NRGVVYLGPGK---VEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTTA--PTGLVLGHEITGEVIEKG 77 (393)
T ss_pred ceEEEEecCCc---eeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCCC--CCCccccceeEEEEEEEc
Confidence 89999987765 889999999874 689999999999999999999886542 358899999999999999
Q ss_pred CCCCCCCCCCEEEEEc-------------------------------------CCceeeeEEeecCC--ceeeCCCCCCH
Q 020487 74 KNVSRWKVGDQVCALL-------------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSL 114 (325)
Q Consensus 74 ~~~~~~~~Gd~V~~~~-------------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~ 114 (325)
+++++|++||||+... .+|+|+||+.+++. .++++|++++.
T Consensus 78 ~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~ 157 (393)
T TIGR02819 78 RDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQA 157 (393)
T ss_pred CccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCCcccc
Confidence 9999999999996520 14899999999964 69999998653
Q ss_pred ----HhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEE-EecChhhHHHHHHcCCCEEE
Q 020487 115 ----KDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFV-TAGSEEKLAVCKDLGADVCI 189 (325)
Q Consensus 115 ----~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~-~~~~~~~~~~~~~~g~~~~~ 189 (325)
..++++..++.++|+++ ...++++|++++|.|+ |++|++++|+|+.+|+++++ +++++++++.++++|++.+.
T Consensus 158 ~~~~~~~a~l~~~~~ta~~a~-~~~~~~~g~~VlV~G~-G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~ 235 (393)
T TIGR02819 158 LEKIRDLTMLSDIFPTGYHGA-VTAGVGPGSTVYIAGA-GPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVD 235 (393)
T ss_pred cccccceeeeccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEe
Confidence 34677888999999988 4578999999999776 99999999999999997544 55677899999999997543
Q ss_pred eCCCchHHHHHHHHhCCCcccEEEeCCChH---------------HHHHhhccccCCCEEEEEeccCC-cccc-------
Q 020487 190 NYKTEDFVARVKEETGGKGVDVILDCMGAS---------------YFQRNLGSLNIDGRLFIIGTQGG-AKTE------- 246 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~---------------~~~~~~~~l~~~g~~v~~g~~~~-~~~~------- 246 (325)
.....++.+.+.+.++++++|++|||+|.+ .+..+++.++++|+++.+|.+.. ....
T Consensus 236 ~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~ 315 (393)
T TIGR02819 236 LSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKT 315 (393)
T ss_pred cCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccc
Confidence 333445667778888877899999999974 57889999999999999998632 2111
Q ss_pred ----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccc-cccchhhHHHHHHHHHhCCCce
Q 020487 247 ----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIY-KYLPLCEAAEAHQLMESSQHIG 319 (325)
Q Consensus 247 ----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~-~~~~l~~~~~a~~~~~~~~~~g 319 (325)
+....++.+++++.+.... . .+....+++++.+|+++. +++ ++|+|+++++|++.+.+++. .
T Consensus 316 ~~~~i~~~~~~~~~~~i~g~~~~------~----~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~~-~ 384 (393)
T TIGR02819 316 GSLSIRFGLGWAKSHSFHTGQTP------V----MKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGAA-K 384 (393)
T ss_pred cccccchHHhhccCceEEeccCC------h----hhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCCc-e
Confidence 2223333445555542111 0 011223889999999764 455 78999999999999988754 7
Q ss_pred eEEEeC
Q 020487 320 KIMLVP 325 (325)
Q Consensus 320 kvvi~~ 325 (325)
|+++.|
T Consensus 385 Kvvi~~ 390 (393)
T TIGR02819 385 KFVIDP 390 (393)
T ss_pred EEEEeC
Confidence 999876
No 26
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=100.00 E-value=3e-42 Score=306.06 Aligned_cols=314 Identities=20% Similarity=0.233 Sum_probs=256.0
Q ss_pred EEEEEcCCC----CCcceEEEee---cCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCC--ceeEEEEE
Q 020487 2 KAIVITQPG----SPEVLQLQEV---EDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL--ECSGTILS 71 (325)
Q Consensus 2 ~a~~~~~~~----~~~~l~~~~~---~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~--e~~G~V~~ 71 (325)
|.+++.... .+++|++++. +.|. ++++||+||+.++++|+.|+..+.+..+. ...|.++|+ |++|+|..
T Consensus 10 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~-~~~p~~~G~~~~~~G~v~~ 88 (348)
T PLN03154 10 KQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDS-YLPPFVPGQRIEGFGVSKV 88 (348)
T ss_pred eEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCC-CCCCcCCCCeeEeeEEEEE
Confidence 556664222 3467888884 5553 47999999999999999998754432221 124778998 88999999
Q ss_pred ecCCCCCCCCCCEEEEEcCCceeeeEEeecCCc--eee--CCCCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEE
Q 020487 72 VGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQ--VLP--VPSGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVH 146 (325)
Q Consensus 72 vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~ 146 (325)
+|+++++|++||+|+++ |+|++|.+++... +++ +|++++++ +++++++++.|||+++.+...+++|++|+|+
T Consensus 89 vg~~v~~~~~Gd~V~~~---~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~ 165 (348)
T PLN03154 89 VDSDDPNFKPGDLISGI---TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVS 165 (348)
T ss_pred EecCCCCCCCCCEEEec---CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 99999999999999887 7899999998753 544 59999986 6888999999999999888889999999999
Q ss_pred cCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHh
Q 020487 147 GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRN 224 (325)
Q Consensus 147 g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~ 224 (325)
|++|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++.. ..+.+.+.+.++ +++|++|||+|+..+...
T Consensus 166 GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvD~v~d~vG~~~~~~~ 244 (348)
T PLN03154 166 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP-EGIDIYFDNVGGDMLDAA 244 (348)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC-CCcEEEEECCCHHHHHHH
Confidence 99999999999999999999999999999999887 799999998875 366677777765 589999999999888999
Q ss_pred hccccCCCEEEEEeccCCccc-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccc
Q 020487 225 LGSLNIDGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKY 299 (325)
Q Consensus 225 ~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~ 299 (325)
+++++++|+++.+|...+... ..+...++.+++++.|+....+. ....+.++++++++.+|++++.+..+
T Consensus 245 ~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~G~l~~~~~~~ 319 (348)
T PLN03154 245 LLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYL-----HLFPQFLENVSRYYKQGKIVYIEDMS 319 (348)
T ss_pred HHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHH-----HHHHHHHHHHHHHHHCCCccCceecc
Confidence 999999999999987654321 12455677788999887643221 11234566689999999999888889
Q ss_pred cchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 300 LPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 300 ~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
|+|+++++|++.+++++..||+|+++
T Consensus 320 ~~L~~~~~A~~~l~~g~~~GKvVl~~ 345 (348)
T PLN03154 320 EGLESAPAALVGLFSGKNVGKQVIRV 345 (348)
T ss_pred cCHHHHHHHHHHHHcCCCCceEEEEe
Confidence 99999999999999999999999874
No 27
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=100.00 E-value=3e-42 Score=305.81 Aligned_cols=314 Identities=25% Similarity=0.269 Sum_probs=256.2
Q ss_pred EEEEEcCCCCCcceEEEeecC----CCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCce--eEEEEEecCC
Q 020487 2 KAIVITQPGSPEVLQLQEVED----PQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLEC--SGTILSVGKN 75 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~----~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~--~G~V~~vG~~ 75 (325)
|++....+ .++.|++++.+. |+|+++||+|||.+++||+.|++...|..+.....|+++|++. .|.+..+|+.
T Consensus 9 ~~~~~~~~-~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~ 87 (338)
T cd08295 9 KAYVTGFP-KESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSG 87 (338)
T ss_pred ecCCCCCC-CccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecC
Confidence 44443332 246799999987 8899999999999999999999998885432223477889754 4566667888
Q ss_pred CCCCCCCCEEEEEcCCceeeeEEeecC-CceeeCC-CCCCHH-hhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchH
Q 020487 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVP-SGVSLK-DAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGI 152 (325)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~ 152 (325)
++.|++||+|+++ |+|+||+++++ ..++++| +++++. +++++++++.|||+++.+..++++|++++|+|++|++
T Consensus 88 v~~~~vGd~V~~~---g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~v 164 (338)
T cd08295 88 NPDFKVGDLVWGF---TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAV 164 (338)
T ss_pred CCCCCCCCEEEec---CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHH
Confidence 8899999999987 78999999999 7999995 678876 7889999999999999888899999999999999999
Q ss_pred HHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccC
Q 020487 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (325)
Q Consensus 153 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (325)
|.+++|+|+.+|++|+++++++++.+.+++ +|+++++++.. .++.+.+.+.++ +++|++||++|+..+...++++++
T Consensus 165 G~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~-~gvd~v~d~~g~~~~~~~~~~l~~ 243 (338)
T cd08295 165 GQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFP-NGIDIYFDNVGGKMLDAVLLNMNL 243 (338)
T ss_pred HHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccHHHHHHHhCC-CCcEEEEECCCHHHHHHHHHHhcc
Confidence 999999999999999999999999999988 99999998654 466777777765 689999999999888999999999
Q ss_pred CCEEEEEeccCCccc-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487 231 DGRLFIIGTQGGAKT-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 305 (325)
Q Consensus 231 ~g~~v~~g~~~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~ 305 (325)
+|+++.+|....... ..+...+..+++++.++...... ....+.++++++++.+|.+++.+...|+++++
T Consensus 244 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~-----~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~ 318 (338)
T cd08295 244 HGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYL-----HRYPEFLEEMSGYIKEGKLKYVEDIADGLESA 318 (338)
T ss_pred CcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhH-----HHHHHHHHHHHHHHHCCCeEceeecccCHHHH
Confidence 999999986543211 12344556677777775443221 12334566688999999998877677999999
Q ss_pred HHHHHHHHhCCCceeEEEeC
Q 020487 306 AEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 306 ~~a~~~~~~~~~~gkvvi~~ 325 (325)
++|++.+.+++..||+|+..
T Consensus 319 ~~A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 319 PEAFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHHHhcCCCCceEEEEC
Confidence 99999999999899999863
No 28
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=100.00 E-value=1.9e-42 Score=308.69 Aligned_cols=304 Identities=21% Similarity=0.280 Sum_probs=254.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
++|+++..++.. +++++.+.|+|+++||+||+.++++|++|++.+.|.++.. .+|.++|||++|+|+++|++++.|+
T Consensus 10 ~~~~~~~~~~~~--~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~-~~p~i~G~E~~G~Vv~vG~~v~~~~ 86 (357)
T PLN02514 10 TTGWAARDPSGH--LSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMS-NYPMVPGHEVVGEVVEVGSDVSKFT 86 (357)
T ss_pred EEEEEEecCCCC--ceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcC-CCCccCCceeeEEEEEECCCccccc
Confidence 478888888865 8899999999999999999999999999999988866432 3578999999999999999999999
Q ss_pred CCCEEEEE-----c------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHH
Q 020487 81 VGDQVCAL-----L------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVAC 125 (325)
Q Consensus 81 ~Gd~V~~~-----~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~ 125 (325)
+||+|+.. | .+|+|++|++++.+.++++|+++++++++.++..+.
T Consensus 87 ~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ 166 (357)
T PLN02514 87 VGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGV 166 (357)
T ss_pred CCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHH
Confidence 99999731 1 248999999999999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHh
Q 020487 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
+||.++......++|++++|+|+ |++|++++|+|+.+|++|++++.+++++..+ +++|++.+++.... +.+.+.+
T Consensus 167 ta~~al~~~~~~~~g~~vlV~G~-G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~---~~~~~~~ 242 (357)
T PLN02514 167 TVYSPLSHFGLKQSGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDA---AEMQEAA 242 (357)
T ss_pred HHHHHHHHcccCCCCCeEEEEcc-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCCh---HHHHHhc
Confidence 99999866666689999999976 9999999999999999999998888776555 56999877765442 2344444
Q ss_pred CCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
+ ++|++|||+|. ..+..++++++++|+++.+|.... ...++...++.+++++.++..... +.++++
T Consensus 243 ~--~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~g~~~~~~----------~~~~~~ 309 (357)
T PLN02514 243 D--SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINT-PLQFVTPMLMLGRKVITGSFIGSM----------KETEEM 309 (357)
T ss_pred C--CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCC-CCcccHHHHhhCCcEEEEEecCCH----------HHHHHH
Confidence 3 69999999996 467888999999999999997643 334666677788999998865432 123448
Q ss_pred HHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 284 WPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++++.+|++.+.+ ++|+|+|+++|++.+.+++..||+++.|
T Consensus 310 ~~~~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gk~v~~~ 350 (357)
T PLN02514 310 LEFCKEKGLTSMI-EVVKMDYVNTAFERLEKNDVRYRFVVDV 350 (357)
T ss_pred HHHHHhCCCcCcE-EEEcHHHHHHHHHHHHcCCCceeEEEEc
Confidence 8999999998776 5899999999999999998889999875
No 29
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=100.00 E-value=3.7e-42 Score=306.82 Aligned_cols=307 Identities=31% Similarity=0.465 Sum_probs=260.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCC-C--CC-------CCCCCCCCCCceeEEEE
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-Y--PP-------PKGASPYPGLECSGTIL 70 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~-~--~~-------~~~~p~~~G~e~~G~V~ 70 (325)
|||+++..++. +++++.+.|+|.++||+||+.++++|++|++.+.+. . +. ...+|.++|||++|+|+
T Consensus 1 mka~~~~~~~~---l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~ 77 (351)
T cd08233 1 MKAARYHGRKD---IRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVV 77 (351)
T ss_pred CceEEEecCCc---eEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEE
Confidence 89999987654 899999999999999999999999999998876532 1 10 11257899999999999
Q ss_pred EecCCCCCCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487 71 SVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (325)
Q Consensus 71 ~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (325)
++|++++.|++||+|+... .+|+|++|+.++...++++|+++++++++.+ .
T Consensus 78 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~-~ 156 (351)
T cd08233 78 EVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV-E 156 (351)
T ss_pred EeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc-c
Confidence 9999999999999998621 1589999999999999999999999988765 6
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (325)
Q Consensus 123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (325)
+..+||.++ ...++++|++++|+|+ |.+|++++|+|+.+|+ +|+++++++++.+.++++|++.+++++...+.+.+.
T Consensus 157 ~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~ 234 (351)
T cd08233 157 PLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVR 234 (351)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHH
Confidence 778999998 7788999999999986 9999999999999999 899999999999999999999999988888888888
Q ss_pred HHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 280 (325)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 280 (325)
+.++++++|+++||+|. ..+..++++++++|+++.+|... ....++...+..+++++.+...... +.+
T Consensus 235 ~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~g~~~~~~----------~~~ 303 (351)
T cd08233 235 KLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWE-KPISFNPNDLVLKEKTLTGSICYTR----------EDF 303 (351)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCC-CCCccCHHHHHhhCcEEEEEeccCc----------chH
Confidence 88887789999999985 56788899999999999999765 3345667777788999988754321 234
Q ss_pred HHHHHHHHCCccc--cccccccchhhH-HHHHHHHHhCCCc-eeEEEe
Q 020487 281 KNVWPAIAVGKVK--PVIYKYLPLCEA-AEAHQLMESSQHI-GKIMLV 324 (325)
Q Consensus 281 ~~~~~~~~~g~l~--~~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvi~ 324 (325)
+++++++.+|.++ +.++++|+++|+ ++|++.+.+++.. +|+|+.
T Consensus 304 ~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~~ 351 (351)
T cd08233 304 EEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILVS 351 (351)
T ss_pred HHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEeC
Confidence 4589999999985 457889999997 7899999988874 899873
No 30
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=100.00 E-value=1.5e-41 Score=299.69 Aligned_cols=320 Identities=33% Similarity=0.489 Sum_probs=276.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
|||+++.+++.++.+++.+.+.|.+.++||+|++.++++|++|++...|..+. ....|.++|||++|+|+++|+++..
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~ 80 (324)
T cd08244 1 MRAIRLHEFGPPEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDP 80 (324)
T ss_pred CeEEEEcCCCCccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCC
Confidence 89999988777777888888887789999999999999999999988886543 2234678999999999999999999
Q ss_pred CCCCCEEEEEcC--CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487 79 WKVGDQVCALLG--GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (325)
Q Consensus 79 ~~~Gd~V~~~~~--~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~ 156 (325)
+++||+|+++.. .|+|++|+.++.+.++++|+++++.+++++++.+++|| ++....+++++++++|+|++|.+|.++
T Consensus 81 ~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~ 159 (324)
T cd08244 81 AWLGRRVVAHTGRAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLL 159 (324)
T ss_pred CCCCCEEEEccCCCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHH
Confidence 999999999862 58999999999999999999999999999999999995 455778899999999999999999999
Q ss_pred HHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487 157 IQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 157 ~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (325)
+++|+.+|++|+++++++++.+.++++|++.+++.+...+...+.+.++++++|+++||+|+......+++++++|+++.
T Consensus 160 ~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~ 239 (324)
T cd08244 160 VQLAKAAGATVVGAAGGPAKTALVRALGADVAVDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLT 239 (324)
T ss_pred HHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEE
Confidence 99999999999999999999999999999888888777777788888887889999999999888888999999999999
Q ss_pred EeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCC
Q 020487 237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQ 316 (325)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~ 316 (325)
+|........++...++.+++++.++....... ....+.++.+.+++.++.+.+.+...|+++++++|++.+.+++
T Consensus 240 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~ 315 (324)
T cd08244 240 YGWASGEWTALDEDDARRRGVTVVGLLGVQAER----GGLRALEARALAEAAAGRLVPVVGQTFPLERAAEAHAALEARS 315 (324)
T ss_pred EecCCCCCCccCHHHHhhCCcEEEEeecccCCH----HHHHHHHHHHHHHHHCCCccCccceEEeHHHHHHHHHHHHcCC
Confidence 987654333445455567888888776543321 2345566778899999999877889999999999999999999
Q ss_pred CceeEEEeC
Q 020487 317 HIGKIMLVP 325 (325)
Q Consensus 317 ~~gkvvi~~ 325 (325)
..+|++++|
T Consensus 316 ~~~kvv~~~ 324 (324)
T cd08244 316 TVGKVLLLP 324 (324)
T ss_pred CCceEEEeC
Confidence 999999987
No 31
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=100.00 E-value=5.1e-42 Score=304.90 Aligned_cols=324 Identities=28% Similarity=0.356 Sum_probs=273.9
Q ss_pred CEEEEEcCCCCC-cceEEEeecCCCCCC-CeEEEEEeeeecChhhhhhhhCCCCCCCC----CCCCCCCceeEEEEEecC
Q 020487 1 MKAIVITQPGSP-EVLQLQEVEDPQIKD-DEVLIKVEATALNRADTLQRKGSYPPPKG----ASPYPGLECSGTILSVGK 74 (325)
Q Consensus 1 m~a~~~~~~~~~-~~l~~~~~~~~~~~~-~ev~v~v~~~~i~~~D~~~~~g~~~~~~~----~p~~~G~e~~G~V~~vG~ 74 (325)
|||+++...+.+ +.+++++.|.|+|.+ +||+||+.++++|++|+..+.|..+.... +|.++|||++|+|+++|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~ 80 (341)
T cd08290 1 AKALVYTEHGEPKEVLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGS 80 (341)
T ss_pred CceEEEccCCCchhheEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCC
Confidence 999999988765 468999999998887 99999999999999999999887653322 567899999999999999
Q ss_pred CCCCCCCCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHH
Q 020487 75 NVSRWKVGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIG 153 (325)
Q Consensus 75 ~~~~~~~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G 153 (325)
++..|++||+|++.. ..|+|++|+.++.+.++++|+++++++++.++....++|.++.....++++++|+|+|++|.+|
T Consensus 81 ~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg 160 (341)
T cd08290 81 GVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVG 160 (341)
T ss_pred CCCCCCCCCEEEecCCCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHH
Confidence 999999999999886 3689999999999999999999999999999999999999997778899999999999999999
Q ss_pred HHHHHHHHHCCCEEEEEecCh----hhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCCcccEEEeCCChHHHHHhhc
Q 020487 154 TFAIQMGKCQGVRVFVTAGSE----EKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGVDVILDCMGASYFQRNLG 226 (325)
Q Consensus 154 ~~~~~~a~~~g~~v~~~~~~~----~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~ 226 (325)
++++++|+..|+++++++.++ ++.+.++++|++++++.... .+...+....++ ++|+++||+|+..+...++
T Consensus 161 ~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~d~vld~~g~~~~~~~~~ 239 (341)
T cd08290 161 QAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVLTEEELRSLLATELLKSAPGG-RPKLALNCVGGKSATELAR 239 (341)
T ss_pred HHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhcCCCEEEeCcccccccHHHHHHHHcCC-CceEEEECcCcHhHHHHHH
Confidence 999999999999999998776 56778888999999887765 667777777766 8999999999988888899
Q ss_pred cccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccccccc---chh
Q 020487 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYL---PLC 303 (325)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~---~l~ 303 (325)
+++++|+++.+|........++....+.+++++.+...........+......++.+.+++.+|.+.+.....+ +++
T Consensus 240 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 319 (341)
T cd08290 240 LLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGKLKAPPVEKVTDDPLE 319 (341)
T ss_pred HhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCCcccccccCCHH
Confidence 99999999999865433334555566778999988765433210112334456677889999999887766677 999
Q ss_pred hHHHHHHHHHhCCCceeEEEeC
Q 020487 304 EAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 304 ~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++++++.+.+++..+|+|+.+
T Consensus 320 ~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 320 EFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred HHHHHHHHHhhcCCCCeEEEeC
Confidence 9999999999988889999864
No 32
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=100.00 E-value=2e-41 Score=300.23 Aligned_cols=324 Identities=43% Similarity=0.735 Sum_probs=277.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++...+....+++++.+.|++.++||+||+.++++|+.|+....+..+.....|.++|+|++|+|+++|+++..++
T Consensus 2 m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 81 (334)
T PTZ00354 2 MRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRFK 81 (334)
T ss_pred cEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCCC
Confidence 89999998887767888888888899999999999999999999998887654444567899999999999999999999
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+||+|+++..+|+|++|++++.+.++++|++++..+++.++.++.+||+++.....++++++++|+|++|.+|++++++|
T Consensus 82 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a 161 (334)
T PTZ00354 82 EGDRVMALLPGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLA 161 (334)
T ss_pred CCCEEEEecCCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHH
Confidence 99999998767999999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCch-HHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTED-FVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
+.+|++++++++++++.+.++++|.+.+++....+ +.+.+.+.++++++|++++|.++..+..++++++++|+++.+|.
T Consensus 162 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~ 241 (334)
T PTZ00354 162 EKYGAATIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGF 241 (334)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEec
Confidence 99999988899999999999999998888776654 67778888877889999999998888889999999999999986
Q ss_pred cCCcccc-cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487 240 QGGAKTE-LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 318 (325)
Q Consensus 240 ~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~ 318 (325)
....... ++...+..++.++.+...........+......++.+++++.++.+.+.+.+.+++++++++++.+.+++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (334)
T PTZ00354 242 MGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNI 321 (334)
T ss_pred CCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCC
Confidence 5443322 566666667778887765443222223344556677889999999988788999999999999999988878
Q ss_pred eeEEEe
Q 020487 319 GKIMLV 324 (325)
Q Consensus 319 gkvvi~ 324 (325)
+|+++.
T Consensus 322 ~kvvv~ 327 (334)
T PTZ00354 322 GKVVLT 327 (334)
T ss_pred ceEEEe
Confidence 898874
No 33
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=100.00 E-value=2.5e-42 Score=308.16 Aligned_cols=302 Identities=21% Similarity=0.251 Sum_probs=236.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
|||+++...+ ++ +++++.|.|+|+++||+|||.++|||++|++.+.|.++..+ .+|.++|||++|+|+++|++ +.
T Consensus 1 mka~~~~~~~-~~-l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~ 77 (355)
T cd08230 1 MKAIAVKPGK-PG-VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SG 77 (355)
T ss_pred CceeEecCCC-CC-CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CC
Confidence 8999998533 34 99999999999999999999999999999999998754322 35789999999999999999 99
Q ss_pred CCCCCEEEEEc------------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH
Q 020487 79 WKVGDQVCALL------------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW 128 (325)
Q Consensus 79 ~~~Gd~V~~~~------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (325)
|++||+|+... .+|+|++|++++++.++++|++++ + ++++..+.++++
T Consensus 78 ~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~-~a~~~~p~~~~~ 155 (355)
T cd08230 78 LSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-D-VGVLLEPLSVVE 155 (355)
T ss_pred CCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-c-ceeecchHHHHH
Confidence 99999998632 248899999999999999999998 3 444555666655
Q ss_pred HHHHh------hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec---ChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487 129 STVFM------TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG---SEEKLAVCKDLGADVCINYKTEDFVAR 199 (325)
Q Consensus 129 ~~l~~------~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (325)
.++.. ...+++|++|+|+|+ |++|++++|+|+.+|++|+++++ ++++++.++++|++. +++....+.+
T Consensus 156 ~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~~~~~~- 232 (355)
T cd08230 156 KAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATY-VNSSKTPVAE- 232 (355)
T ss_pred HHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEE-ecCCccchhh-
Confidence 54422 223578999999997 99999999999999999999987 678889999999986 4554444332
Q ss_pred HHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccc----hHHHHhhccEeeecccccccchhHH
Q 020487 200 VKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELN----ITSLFAKRLTVQAAGLRSRSTENKA 273 (325)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~----~~~~~~~~~~i~~~~~~~~~~~~~~ 273 (325)
... ..++|++|||+|.. .+..+++.++++|+++++|.... ....++ ...++.+++++.|+......
T Consensus 233 -~~~--~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~----- 304 (355)
T cd08230 233 -VKL--VGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKR----- 304 (355)
T ss_pred -hhh--cCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchh-----
Confidence 111 24799999999975 57888999999999999997665 223344 34567789999997543321
Q ss_pred HHHHHHHHHHHHHHHCCc------cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 274 LIVSEVEKNVWPAIAVGK------VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~g~------l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
.+ +.+++++.++. +++.++++|+++|+++|++.++++. .|+|+++
T Consensus 305 -~~----~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 305 -HF----EQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred -hH----HHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 12 22566666554 6667899999999999999887554 4999864
No 34
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=100.00 E-value=4.3e-42 Score=305.82 Aligned_cols=305 Identities=22% Similarity=0.365 Sum_probs=253.5
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 020487 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (325)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (325)
+++.+++++ +++++.|.|+|.++||+||+.++|+|++|++.+.+.......+|.++|||++|+|+++|+++..+ +||
T Consensus 2 ~~~~~~g~~--~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~Gd 78 (349)
T TIGR03201 2 WMMTEPGKP--MVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGK 78 (349)
T ss_pred ceEecCCCC--ceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCC
Confidence 455666654 88899999999999999999999999999998754433223457899999999999999999877 999
Q ss_pred EEEEE----------c-----------------CCceeeeEEeecCCceeeCCC------CCCHHhhccCcchHHHHHHH
Q 020487 84 QVCAL----------L-----------------GGGGYAEKVAVPAGQVLPVPS------GVSLKDAAAFPEVACTVWST 130 (325)
Q Consensus 84 ~V~~~----------~-----------------~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~l~~~~~~a~~~ 130 (325)
+|+.. | .+|+|++|+.++.+.++++|+ ++++++++.++.++.++|.+
T Consensus 79 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a 158 (349)
T TIGR03201 79 AVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQA 158 (349)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHH
Confidence 99861 1 258999999999999999999 89999999999999999999
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCC
Q 020487 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGK 207 (325)
Q Consensus 131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~ 207 (325)
+. ...+++|++|+|+|+ |++|++++|+|+..|++|+++++++++++.++++|++++++.... .+.+.+.+.++++
T Consensus 159 ~~-~~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~ 236 (349)
T TIGR03201 159 AV-QAGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKAR 236 (349)
T ss_pred HH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccC
Confidence 84 578899999999999 999999999999999999999999999999999999988876553 4566677777777
Q ss_pred ccc----EEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHH
Q 020487 208 GVD----VILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKN 282 (325)
Q Consensus 208 ~~d----~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 282 (325)
++| ++|||+|... +..++++++++|+++.+|..... ..++...++.++.++.+...... +.++.
T Consensus 237 g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-~~~~~~~~~~~~~~~~g~~~~~~----------~~~~~ 305 (349)
T TIGR03201 237 GLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK-TEYRLSNLMAFHARALGNWGCPP----------DRYPA 305 (349)
T ss_pred CCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC-cccCHHHHhhcccEEEEEecCCH----------HHHHH
Confidence 886 8999999765 56789999999999999976532 34556666667788877653211 12444
Q ss_pred HHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 283 VWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 283 ~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++++.+|++.+ ++ +.|+|+++++|++.+++++..||++++|
T Consensus 306 ~~~~i~~g~i~~~~~i-~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 306 ALDLVLDGKIQLGPFV-ERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred HHHHHHcCCCCcccce-EEecHHHHHHHHHHHHcCCccceEEecC
Confidence 889999999864 44 4799999999999999999889999876
No 35
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=100.00 E-value=7.4e-42 Score=310.03 Aligned_cols=311 Identities=24% Similarity=0.315 Sum_probs=248.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhh-hCCCCC-----CCCCCCCCCCceeEEEEEecC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPP-----PKGASPYPGLECSGTILSVGK 74 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~-~g~~~~-----~~~~p~~~G~e~~G~V~~vG~ 74 (325)
||++++..++. +++++.|.|+|+++||+|||.++|||++|++.+ .|.... ...+|.++|||++|+|+++|+
T Consensus 3 ~~a~~~~~~~~---l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~ 79 (410)
T cd08238 3 TKAWRMYGKGD---LRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK 79 (410)
T ss_pred cEEEEEEcCCc---eEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence 68888887664 999999999999999999999999999999976 454211 013578999999999999999
Q ss_pred CCC-CCCCCCEEEEEc----------------CCceeeeEEeecCC----ceeeCCCCCCHHhhccCcchHH--HHHHHH
Q 020487 75 NVS-RWKVGDQVCALL----------------GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVAC--TVWSTV 131 (325)
Q Consensus 75 ~~~-~~~~Gd~V~~~~----------------~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~--~a~~~l 131 (325)
+++ +|++||+|+... .+|+|++|++++++ .++++|+++++++++.+....+ +++.++
T Consensus 80 ~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal~epl~~~~~~~~a~ 159 (410)
T cd08238 80 KWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASLVEPLSCVIGAYTAN 159 (410)
T ss_pred CccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEECCCCCCHHHHhhcchHHHHHHHhhhc
Confidence 998 699999998742 25899999999987 6899999999998885422222 233332
Q ss_pred --------HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC---EEEEEecChhhHHHHHHc--------CCC-EEEeC
Q 020487 132 --------FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV---RVFVTAGSEEKLAVCKDL--------GAD-VCINY 191 (325)
Q Consensus 132 --------~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~---~v~~~~~~~~~~~~~~~~--------g~~-~~~~~ 191 (325)
...+++++|++++|+|++|++|++++|+|+..|+ +|++++.++++++.++++ |++ .+++.
T Consensus 160 ~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~ 239 (410)
T cd08238 160 YHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNP 239 (410)
T ss_pred ccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECC
Confidence 2456789999999999889999999999999864 799999999999999886 665 45665
Q ss_pred CC-chHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-c-ccccchHHHHhhccEeeecccccc
Q 020487 192 KT-EDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-A-KTELNITSLFAKRLTVQAAGLRSR 267 (325)
Q Consensus 192 ~~-~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~-~~~~~~~~~~~~~~~i~~~~~~~~ 267 (325)
.. .++.+.+.+.+++.++|++|+++|. ..+..++++++++|+++.++.... . ..+++...++.+++++.|+.....
T Consensus 240 ~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~ 319 (410)
T cd08238 240 ATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNT 319 (410)
T ss_pred CccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCH
Confidence 54 4567778888888889999999985 567888999999999887754322 1 235666777889999999754321
Q ss_pred cchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 268 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.++++++++.+|++++ +++++|+|+|+++|++.+. ++..||+|+.|
T Consensus 320 ----------~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~ 368 (410)
T cd08238 320 ----------DDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYT 368 (410)
T ss_pred ----------HHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEEC
Confidence 22344889999999876 6799999999999999998 77789999875
No 36
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=100.00 E-value=2.3e-41 Score=299.22 Aligned_cols=309 Identities=23% Similarity=0.275 Sum_probs=255.7
Q ss_pred CEEEEEcCC--CCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCC
Q 020487 1 MKAIVITQP--GSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNV 76 (325)
Q Consensus 1 m~a~~~~~~--~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~ 76 (325)
||+|++... +++ +.+++++.+.|+|+++||+|||.++|||+.|.+...+ + ..+|.++|+|++|+|++ .+
T Consensus 3 ~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~--~--~~~p~v~G~e~~G~V~~---~~ 75 (329)
T cd08294 3 AKTWVLKKHFDGKPKESDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR--L--NEGDTMIGTQVAKVIES---KN 75 (329)
T ss_pred ceEEEEecCCCCCCCccceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc--C--CCCCcEecceEEEEEec---CC
Confidence 899999983 444 7899999999999999999999999999987652211 1 12477899999999985 44
Q ss_pred CCCCCCCEEEEEcCCceeeeEEeecCC---ceeeCCCCCC-----HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcC
Q 020487 77 SRWKVGDQVCALLGGGGYAEKVAVPAG---QVLPVPSGVS-----LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (325)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~---~~~~~p~~~~-----~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~ 148 (325)
+.|++||+|+++ ++|++|++++.+ .++++|++++ ...+++++.+++|||+++.+..++++|++++|+|+
T Consensus 76 ~~~~~Gd~V~~~---~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga 152 (329)
T cd08294 76 SKFPVGTIVVAS---FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGA 152 (329)
T ss_pred CCCCCCCEEEee---CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecC
Confidence 679999999987 579999999999 9999999988 23334688899999999988889999999999999
Q ss_pred CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccc
Q 020487 149 SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSL 228 (325)
Q Consensus 149 ~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l 228 (325)
+|.+|.+++|+|+..|++|+++++++++.+.++++|+++++++...++.+.+.+.++ +++|+++||+|+..+...++++
T Consensus 153 ~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~~vi~~~~~~~~~~v~~~~~-~gvd~vld~~g~~~~~~~~~~l 231 (329)
T cd08294 153 AGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFDAVFNYKTVSLEEALKEAAP-DGIDCYFDNVGGEFSSTVLSHM 231 (329)
T ss_pred ccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCccHHHHHHHHCC-CCcEEEEECCCHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999888888888877776 6899999999998889999999
Q ss_pred cCCCEEEEEeccCCcc-c-----ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487 229 NIDGRLFIIGTQGGAK-T-----ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 302 (325)
Q Consensus 229 ~~~g~~v~~g~~~~~~-~-----~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l 302 (325)
+++|+++.+|...... . ......+..+++++.++..... .....+.++.+++++.+|.+.+.+..+|++
T Consensus 232 ~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l 306 (329)
T cd08294 232 NDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRW-----QDRWPEALKQLLKWIKEGKLKYREHVTEGF 306 (329)
T ss_pred ccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhh-----HHHHHHHHHHHHHHHHCCCCcCCcccccCH
Confidence 9999999998543211 0 1223345667788877644322 122345566788999999998777678999
Q ss_pred hhHHHHHHHHHhCCCceeEEEeC
Q 020487 303 CEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 303 ~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++++|++.+.+++..||+|+++
T Consensus 307 ~~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 307 ENMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHHHcCCCCCeEEEeC
Confidence 99999999999999999999864
No 37
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=100.00 E-value=2.8e-41 Score=302.25 Aligned_cols=309 Identities=27% Similarity=0.419 Sum_probs=257.5
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC---
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR--- 78 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~--- 78 (325)
||+++..+++ .+++++.+.|+|.++||+||+.++++|++|++...|.++. ..+|.++|||++|+|+++|++++.
T Consensus 2 ka~~~~~~~~--~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~~ 78 (361)
T cd08231 2 RAAVLTGPGK--PLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPR-VPLPIILGHEGVGRVVALGGGVTTDVA 78 (361)
T ss_pred eEEEEcCCCC--CCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCC-CCCCcccccCCceEEEEeCCCcccccc
Confidence 7899998774 3999999999999999999999999999999999887753 335789999999999999999976
Q ss_pred ---CCCCCEEEEEc----------------------------------CCceeeeEEeecCC-ceeeCCCCCCHHhhccC
Q 020487 79 ---WKVGDQVCALL----------------------------------GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (325)
Q Consensus 79 ---~~~Gd~V~~~~----------------------------------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (325)
|++||+|+.+. ..|+|++|+.++++ .++++|++++..+++++
T Consensus 79 ~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~ 158 (361)
T cd08231 79 GEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPA 158 (361)
T ss_pred CCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHh
Confidence 99999998762 24899999999996 79999999999999988
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchH---
Q 020487 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF--- 196 (325)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--- 196 (325)
++++.+||.++......++++++||+|+ |.+|++++++|+..|+ +|+++++++++.+.++++|++.+++.+....
T Consensus 159 ~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~ 237 (361)
T cd08231 159 NCALATVLAALDRAGPVGAGDTVVVQGA-GPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQR 237 (361)
T ss_pred cCHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHH
Confidence 8999999999977766779999999985 9999999999999999 9999999999999999999998887765433
Q ss_pred HHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccchhHHH
Q 020487 197 VARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTENKAL 274 (325)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 274 (325)
...+.+.++++++|++|||+|+ ..+...+++++++|+++.+|.... ....++...++.+++++.++......
T Consensus 238 ~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 311 (361)
T cd08231 238 RAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPS------ 311 (361)
T ss_pred HHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCch------
Confidence 2467777887889999999986 457888999999999999987643 22345555567789998887653221
Q ss_pred HHHHHHHHHHHHHHCC----ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 275 IVSEVEKNVWPAIAVG----KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 275 ~~~~~~~~~~~~~~~g----~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
.+++ +++++.++ .+.++++++|+++++++|++.+.+++. +|++|.|
T Consensus 312 ~~~~----~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 312 HLYR----AVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred hHHH----HHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 1233 55666555 355677899999999999999988764 7999987
No 38
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=100.00 E-value=2e-41 Score=298.97 Aligned_cols=299 Identities=20% Similarity=0.259 Sum_probs=245.4
Q ss_pred CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC
Q 020487 11 SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (325)
Q Consensus 11 ~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (325)
.++.+++++.+.|+|+++||+|||.++|+|+.+.. |.++.. ..|.++|.|++|+|+++|+ .|++||+|+++
T Consensus 15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~-~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~-- 85 (325)
T TIGR02825 15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLK-EGDTMMGQQVARVVESKNV---ALPKGTIVLAS-- 85 (325)
T ss_pred CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCC-CCCcEecceEEEEEEeCCC---CCCCCCEEEEe--
Confidence 45779999999999999999999999999997654 333222 2367999999999999874 59999999987
Q ss_pred CceeeeEEeecCCceeeC----CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487 91 GGGYAEKVAVPAGQVLPV----PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (325)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~ 165 (325)
++|++|++++.+.+.++ |++++++++ ++++.++.|||+++.+..++++|++|||+|++|++|++++|+|+..|+
T Consensus 86 -~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~ 164 (325)
T TIGR02825 86 -PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGC 164 (325)
T ss_pred -cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCC
Confidence 46999999999888777 899999987 689999999999988889999999999999999999999999999999
Q ss_pred EEEEEecChhhHHHHHHcCCCEEEeCCCc-hHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-
Q 020487 166 RVFVTAGSEEKLAVCKDLGADVCINYKTE-DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA- 243 (325)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~- 243 (325)
+|+++++++++.+.++++|+++++++... .+.+.+.... ++++|++|||+|+..+..++++++++|+++.+|.....
T Consensus 165 ~Vi~~~~s~~~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~-~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~ 243 (325)
T TIGR02825 165 KVVGAAGSDEKVAYLKKLGFDVAFNYKTVKSLEETLKKAS-PDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYN 243 (325)
T ss_pred EEEEEeCCHHHHHHHHHcCCCEEEeccccccHHHHHHHhC-CCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcc
Confidence 99999999999999999999999988764 4444455544 45899999999998889999999999999999865421
Q ss_pred ---ccc--cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487 244 ---KTE--LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 318 (325)
Q Consensus 244 ---~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~ 318 (325)
... .....+..+++++.++...... .....+.++.+++++.+|++++.+...|+++++++|++.+++++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~ 319 (325)
T TIGR02825 244 RTGPLPPGPPPEIVIYQELRMEGFIVNRWQ----GEVRQKALKELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENL 319 (325)
T ss_pred cCCCCCCCcchHHHhhhcceEeEEEehhhh----hhhhHHHHHHHHHHHHCCCcccceeccccHHHHHHHHHHHhcCCCC
Confidence 111 1233455577777776543221 1223445666899999999988777889999999999999999999
Q ss_pred eeEEEe
Q 020487 319 GKIMLV 324 (325)
Q Consensus 319 gkvvi~ 324 (325)
||+|+.
T Consensus 320 gkvVv~ 325 (325)
T TIGR02825 320 GKTIVK 325 (325)
T ss_pred CeEEeC
Confidence 999874
No 39
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=100.00 E-value=2e-41 Score=301.51 Aligned_cols=306 Identities=21% Similarity=0.247 Sum_probs=242.9
Q ss_pred CcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCC--CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE
Q 020487 12 PEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL 88 (325)
Q Consensus 12 ~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~ 88 (325)
++.+++++.+.|+|. ++||+|||.++|||+.|+....... .....+|.++|||++|+|+++|++++.|++||+|+++
T Consensus 20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~ 99 (345)
T cd08293 20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF 99 (345)
T ss_pred ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence 477999999999874 9999999999999999964332111 1112347789999999999999999999999999886
Q ss_pred cCCceeeeEEeecCCceeeCCCCCCHH----hhccCcchHHHHHHHHHhhcCCCCC--CEEEEEcCCchHHHHHHHHHHH
Q 020487 89 LGGGGYAEKVAVPAGQVLPVPSGVSLK----DAAAFPEVACTVWSTVFMTSHLSPG--ESFLVHGGSSGIGTFAIQMGKC 162 (325)
Q Consensus 89 ~~~g~~~~~~~~~~~~~~~~p~~~~~~----~aa~l~~~~~~a~~~l~~~~~~~~~--~~vli~g~~g~~G~~~~~~a~~ 162 (325)
. ++|++|++++++.++++|+++++. .+++++.++.+||+++.+..+++++ ++|||+|++|++|++++|+|+.
T Consensus 100 ~--~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~ 177 (345)
T cd08293 100 N--WPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRL 177 (345)
T ss_pred C--CCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHH
Confidence 3 689999999999999999985432 2456788899999999778888877 9999999999999999999999
Q ss_pred CCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 163 QGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 163 ~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
+|+ +|+++++++++.+.+++ +|+++++++...++.+.+++.++ +++|++|||+|+..+..++++++++|+++.+|..
T Consensus 178 ~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~-~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~ 256 (345)
T cd08293 178 LGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP-EGVDVYFDNVGGEISDTVISQMNENSHIILCGQI 256 (345)
T ss_pred cCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC-CCceEEEECCCcHHHHHHHHHhccCCEEEEEeee
Confidence 999 89999999999988876 99999999888788888888776 6899999999998888899999999999999853
Q ss_pred CCcc--c----ccc--hHHH-HhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487 241 GGAK--T----ELN--ITSL-FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 311 (325)
Q Consensus 241 ~~~~--~----~~~--~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~ 311 (325)
.... . ... ...+ ..++++........ ......+.++++.+++.+|.+++.+...++++++++|++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~ 331 (345)
T cd08293 257 SQYNKDVPYPPPLPEATEAILKERNITRERFLVLN-----YKDKFEEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQS 331 (345)
T ss_pred ecccCccCccccccchhHHHhhhcceEEEEEEeec-----cHhHHHHHHHHHHHHHHCCCccceeEEeecHHHHHHHHHH
Confidence 3210 0 111 1111 12334433332211 1122345566688999999998776667799999999999
Q ss_pred HHhCCCceeEEEeC
Q 020487 312 MESSQHIGKIMLVP 325 (325)
Q Consensus 312 ~~~~~~~gkvvi~~ 325 (325)
+.+++..||+|+++
T Consensus 332 ~~~~~~~gkvvl~~ 345 (345)
T cd08293 332 MMNGGNIGKQIVKV 345 (345)
T ss_pred HhcCCCCCeEEEEC
Confidence 99998889999864
No 40
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=100.00 E-value=6.9e-42 Score=298.98 Aligned_cols=291 Identities=19% Similarity=0.251 Sum_probs=230.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecC-hhhhhhhhCCCCCC--CCCCCCCCCceeEEEEEecCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALN-RADTLQRKGSYPPP--KGASPYPGLECSGTILSVGKNVS 77 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~-~~D~~~~~g~~~~~--~~~p~~~G~e~~G~V~~vG~~~~ 77 (325)
||++++..++ .+++++.+.|+|+++||+|||.++||| ++|++.+.|..+.. ..+|.++|||++|+|+++|+++
T Consensus 2 ~ka~~~~~~~---~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v- 77 (308)
T TIGR01202 2 TQAIVLSGPN---QIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT- 77 (308)
T ss_pred ceEEEEeCCC---eEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-
Confidence 7899998654 399999999999999999999999996 69999888876532 2468999999999999999998
Q ss_pred CCCCCCEEEEEc---------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcC
Q 020487 78 RWKVGDQVCALL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGG 148 (325)
Q Consensus 78 ~~~~Gd~V~~~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~ 148 (325)
.|++||+|+..+ ..|+|+||++++++.++++|++++++. +.+ .+..+||+++.. . ..++++++|+|+
T Consensus 78 ~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~~~a~~~~~~-~-~~~~~~vlV~G~ 153 (308)
T TIGR01202 78 GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALAATARHAVAG-A-EVKVLPDLIVGH 153 (308)
T ss_pred CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHHHHHHHHHHh-c-ccCCCcEEEECC
Confidence 599999998632 159999999999999999999999865 444 457899999854 3 346889999986
Q ss_pred CchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhc
Q 020487 149 SSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLG 226 (325)
Q Consensus 149 ~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~ 226 (325)
|++|++++|+|+.+|++ |+++..++++++.+... .+++.... .+.++|++|||+|.. .+..+++
T Consensus 154 -G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~~----------~~~g~Dvvid~~G~~~~~~~~~~ 219 (308)
T TIGR01202 154 -GTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEKD----------PRRDYRAIYDASGDPSLIDTLVR 219 (308)
T ss_pred -CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhhc----------cCCCCCEEEECCCCHHHHHHHHH
Confidence 99999999999999997 44555565565554432 34433211 234799999999986 4688899
Q ss_pred cccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhh
Q 020487 227 SLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCE 304 (325)
Q Consensus 227 ~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~ 304 (325)
.++++|+++.+|.... ...++...++.+++++.++.... .+.++.+++++.+|++++ +++++|+|+|
T Consensus 220 ~l~~~G~iv~~G~~~~-~~~~~~~~~~~~~~~i~~~~~~~----------~~~~~~~~~l~~~g~i~~~~~it~~~~l~~ 288 (308)
T TIGR01202 220 RLAKGGEIVLAGFYTE-PVNFDFVPAFMKEARLRIAAEWQ----------PGDLHAVRELIESGALSLDGLITHQRPASD 288 (308)
T ss_pred hhhcCcEEEEEeecCC-CcccccchhhhcceEEEEecccc----------hhHHHHHHHHHHcCCCChhhccceeecHHH
Confidence 9999999999997643 33455566777888888754321 123455899999999875 6799999999
Q ss_pred HHHHHHHHHhCCCceeEEEe
Q 020487 305 AAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 305 ~~~a~~~~~~~~~~gkvvi~ 324 (325)
+++|++.+.++...+|++++
T Consensus 289 ~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 289 AAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred HHHHHHHHhcCcCceEEEeC
Confidence 99999998877777899874
No 41
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=100.00 E-value=6.5e-41 Score=296.63 Aligned_cols=304 Identities=30% Similarity=0.461 Sum_probs=259.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+++. +++++.+.|++.++||+||+.++++|++|+..+.|..+.. .+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~p~~~g~e~~G~v~~vG~~v~~~~ 77 (333)
T cd08296 1 YKAVQVTEPGGP--LELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGL-SYPRVPGHEVVGRIDAVGEGVSRWK 77 (333)
T ss_pred CeEEEEccCCCC--ceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCC-CCCcccCcceeEEEEEECCCCccCC
Confidence 999999987543 8899999999999999999999999999999998876432 3477899999999999999999999
Q ss_pred CCCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+. +..+|++++|+.++...++++|+++++.+++.++.++.++|.++.
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~ 157 (333)
T cd08296 78 VGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR 157 (333)
T ss_pred CCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH
Confidence 9999976 222588999999999999999999999999999999999999985
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
. .+++++++++|+| +|.+|++++++|+.+|++|+++++++++.+.++++|++++++....++...+.+. +++|++
T Consensus 158 ~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~---~~~d~v 232 (333)
T cd08296 158 N-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQEL---GGAKLI 232 (333)
T ss_pred h-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhc---CCCCEE
Confidence 4 4899999999999 5999999999999999999999999999999999999999888776666666554 369999
Q ss_pred EeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 291 (325)
+|+.| ...+...+++++++|+++.+|... ...+++...++.+++++.+...... ..++.+++++.++.
T Consensus 233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~~ 301 (333)
T cd08296 233 LATAPNAKAISALVGGLAPRGKLLILGAAG-EPVAVSPLQLIMGRKSIHGWPSGTA----------LDSEDTLKFSALHG 301 (333)
T ss_pred EECCCchHHHHHHHHHcccCCEEEEEecCC-CCCCcCHHHHhhcccEEEEeCcCCH----------HHHHHHHHHHHhCC
Confidence 99986 566788899999999999998765 3344566667789999998763211 12333677788888
Q ss_pred cccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+++.+ ..|+++++.+|++.+.+++..||+|+.
T Consensus 302 l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 302 VRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred CCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 88775 689999999999999999999999874
No 42
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=100.00 E-value=4.6e-41 Score=297.05 Aligned_cols=310 Identities=33% Similarity=0.475 Sum_probs=249.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCC-CCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASP-YPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~-~~G~e~~G~V~~vG~~~~~~ 79 (325)
|++++...++.. .++++.+.|.+.++||+|||.++|||+||++.+.+..+.... +. ++|||++|+|+++| .++.+
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~-~~~i~GHE~~G~V~evG-~~~~~ 76 (350)
T COG1063 1 MKAAVVYVGGGD--VRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPP-GDIILGHEFVGEVVEVG-VVRGF 76 (350)
T ss_pred CceeEEEecCCc--cccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCC-CCcccCccceEEEEEec-cccCC
Confidence 788888876653 336667666689999999999999999999999997665432 33 89999999999999 77889
Q ss_pred CCCCEEEEE------------------c--------------CCceeeeEEeecCCceee-CCCCCCHHhhccCcchHHH
Q 020487 80 KVGDQVCAL------------------L--------------GGGGYAEKVAVPAGQVLP-VPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 80 ~~Gd~V~~~------------------~--------------~~g~~~~~~~~~~~~~~~-~p~~~~~~~aa~l~~~~~~ 126 (325)
++||||+.- | .+|+|+||+.++.++.+. +|+++ +.+.+++..++.+
T Consensus 77 ~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~ 155 (350)
T COG1063 77 KVGDRVVVEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLAT 155 (350)
T ss_pred CCCCEEEECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhh
Confidence 999999742 1 148999999999765555 58887 5666678999999
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHh
Q 020487 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
++++........++++++|+|+ |++|++++++++..|+ +|++++.+++|++.+++ .+++.+.+.........+.+.+
T Consensus 156 ~~~~~a~~~~~~~~~~V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t 234 (350)
T COG1063 156 AYHGHAERAAVRPGGTVVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELT 234 (350)
T ss_pred hhhhhhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHh
Confidence 9887555666666779999998 9999999999999998 88888999999999998 6666666655556677788888
Q ss_pred CCCcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
++.++|++|||+|... +..+++.++++|+++.+|.+......++...++.+++++.|+...... ..++.+
T Consensus 235 ~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~---------~~~~~~ 305 (350)
T COG1063 235 GGRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGR---------EDFERA 305 (350)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCc---------ccHHHH
Confidence 8889999999999754 688899999999999999887543356677888999999998432111 122338
Q ss_pred HHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487 284 WPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 325 (325)
++++.+|++++ ++++.++++++++|++.+.+.+. .-|+++.|
T Consensus 306 ~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 306 LDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred HHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 89999999765 56899999999999999987554 55998875
No 43
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=100.00 E-value=2e-40 Score=292.95 Aligned_cols=322 Identities=33% Similarity=0.469 Sum_probs=269.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++.+..+|.+..+++++.+.|.|+++||+||+.++|+|++|++...+.++.. .+|.++|+|++|+|+.+|+++..++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (327)
T PRK10754 2 AKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPP-SLPSGLGTEAAGVVSKVGSGVKHIK 80 (327)
T ss_pred ceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCC-CCCCccCcceEEEEEEeCCCCCCCC
Confidence 899999998888889999999999999999999999999999999988876532 2477899999999999999999999
Q ss_pred CCCEEEEEc-CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487 81 VGDQVCALL-GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (325)
Q Consensus 81 ~Gd~V~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~ 159 (325)
+||+|+.+. .+|+|++|+.++.+.++++|+++++++++.++....++|.++.....+++|++++|+|++|.+|++++++
T Consensus 81 ~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~l 160 (327)
T PRK10754 81 VGDRVVYAQSALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW 160 (327)
T ss_pred CCCEEEECCCCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHH
Confidence 999998653 4589999999999999999999999999999999999999987778899999999999889999999999
Q ss_pred HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
++.+|++|+.++.++++.+.++++|++++++.....+.+.+++.++++++|++++|+++..+...+++++++|+++.+|.
T Consensus 161 ak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~ 240 (327)
T PRK10754 161 AKALGAKLIGTVGSAQKAQRAKKAGAWQVINYREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGN 240 (327)
T ss_pred HHHcCCEEEEEeCCHHHHHHHHHCCCCEEEcCCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEcc
Confidence 99999999999999999999999999888888777788888888888899999999999888889999999999999987
Q ss_pred cCCcccccchHHHHhhccEe-eecccccccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCC
Q 020487 240 QGGAKTELNITSLFAKRLTV-QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQ 316 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~ 316 (325)
........+...+..++... ......... ..+....+.++.+++++.+|.+++. ..+.|++++++++++.+.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~ 318 (327)
T PRK10754 241 ASGPVTGVNLGILNQKGSLYVTRPSLQGYI--TTREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRA 318 (327)
T ss_pred CCCCCCCcCHHHHhccCceEEecceeeccc--CCHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCC
Confidence 65322223333333222211 111111111 1122344455668899999998753 478999999999999999999
Q ss_pred CceeEEEeC
Q 020487 317 HIGKIMLVP 325 (325)
Q Consensus 317 ~~gkvvi~~ 325 (325)
..+|+|++|
T Consensus 319 ~~~~~~~~~ 327 (327)
T PRK10754 319 TQGSSLLIP 327 (327)
T ss_pred CcceEEEeC
Confidence 999999987
No 44
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=100.00 E-value=2.1e-41 Score=300.08 Aligned_cols=293 Identities=18% Similarity=0.225 Sum_probs=231.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCC---CCCCCCCCCceeEEEEEecCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPP---KGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~---~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
|++++..+++ +++++.+.|+ +++||+|||.++|||++|++.+.|.++.. ..+|.++|||++|+|+++|.. .
T Consensus 4 ~~~~~~~~~~---~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~ 77 (341)
T cd08237 4 QVYRLVRPKF---FEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T 77 (341)
T ss_pred cceEEeccce---EEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence 5788876654 9999999985 99999999999999999999999875321 246899999999999998864 6
Q ss_pred CCCCCEEEEEc------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh-
Q 020487 79 WKVGDQVCALL------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM- 133 (325)
Q Consensus 79 ~~~Gd~V~~~~------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~- 133 (325)
|++||+|+... .+|+|+||++++++.++++|+++++++|+ +..+++++++++..
T Consensus 78 ~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~~~~a~~a~~~~ 156 (341)
T cd08237 78 YKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTELVSVGVHAISRF 156 (341)
T ss_pred cCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEECCCCCChHHhh-hhchHHHHHHHHHHH
Confidence 99999997531 25889999999999999999999998876 55688888888753
Q ss_pred -hcCCCCCCEEEEEcCCchHHHHHHHHHHH-CC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 134 -TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 134 -~~~~~~~~~vli~g~~g~~G~~~~~~a~~-~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
...+++|++|+|+|+ |++|++++|++++ .| .+|+++++++++++.+++.++...++ . . ....++|
T Consensus 157 ~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~----~----~---~~~~g~d 224 (341)
T cd08237 157 EQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID----D----I---PEDLAVD 224 (341)
T ss_pred hhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh----h----h---hhccCCc
Confidence 345688999999997 9999999999986 55 58999999999999888766543321 1 1 1122699
Q ss_pred EEEeCCCh----HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHH
Q 020487 211 VILDCMGA----SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPA 286 (325)
Q Consensus 211 ~vi~~~g~----~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (325)
++|||+|+ ..+..+++.++++|+++.+|.... ...++...++.+++++.++..... +.++.++++
T Consensus 225 ~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~-~~~~~~~~~~~k~~~i~g~~~~~~----------~~~~~~~~~ 293 (341)
T cd08237 225 HAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY-PVPINTRMVLEKGLTLVGSSRSTR----------EDFERAVEL 293 (341)
T ss_pred EEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC-CcccCHHHHhhCceEEEEecccCH----------HHHHHHHHH
Confidence 99999994 346888999999999999996543 345666777889999998754221 123448888
Q ss_pred HHCC-----ccccccccccch---hhHHHHHHHHHhCCCceeEEEeC
Q 020487 287 IAVG-----KVKPVIYKYLPL---CEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 287 ~~~g-----~l~~~~~~~~~l---~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.+| .+++++++.|++ ++++++++.+.++ ..||+|+.+
T Consensus 294 ~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~ 339 (341)
T cd08237 294 LSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEW 339 (341)
T ss_pred HHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEe
Confidence 9888 577788999998 5667777666554 678999874
No 45
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-40 Score=296.47 Aligned_cols=311 Identities=32% Similarity=0.493 Sum_probs=260.8
Q ss_pred CEEEEEcCCCCCcceEEEe-ecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-------------------CCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQE-VEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-------------------PKGASPY 60 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~-~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-------------------~~~~p~~ 60 (325)
||++++...+.++.+.+.+ .+.|++.+++|+||+.++++|++|++.+.|.++. ...+|.+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 80 (350)
T cd08274 1 MRAVLLTGHGGLDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRI 80 (350)
T ss_pred CeEEEEeccCCccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcc
Confidence 8999998777665576654 4777789999999999999999999988776531 2345788
Q ss_pred CCCceeEEEEEecCCCCCCCCCCEEEEEc-------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCc
Q 020487 61 PGLECSGTILSVGKNVSRWKVGDQVCALL-------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFP 121 (325)
Q Consensus 61 ~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~ 121 (325)
+|||++|+|+++|+++++|++||+|+..+ .+|+|++|+.++.+.++++|+++++.+++++.
T Consensus 81 ~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~ 160 (350)
T cd08274 81 QGADIVGRVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFP 160 (350)
T ss_pred cCCcceEEEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcc
Confidence 99999999999999999999999998742 24899999999999999999999999999999
Q ss_pred chHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487 122 EVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (325)
Q Consensus 122 ~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (325)
..+.++|+++ ....++++++++|+|++|.+|++++++++.+|+++++++.++ +++.++++|++.+.+........ .
T Consensus 161 ~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~--~ 236 (350)
T cd08274 161 CSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVRALGADTVILRDAPLLAD--A 236 (350)
T ss_pred cHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHHhcCCeEEEeCCCccHHH--H
Confidence 9999999988 778899999999999999999999999999999999988665 77888889987666554444333 4
Q ss_pred HHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHH
Q 020487 202 EETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEK 281 (325)
Q Consensus 202 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 281 (325)
..+.++++|++|||+|+..+..++++++++|+++.+|........++...++.+++++.+..... .+.++
T Consensus 237 ~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~ 306 (350)
T cd08274 237 KALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGT----------REVFR 306 (350)
T ss_pred HhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCC----------HHHHH
Confidence 55667789999999999888999999999999999986543324556666677888888765421 22345
Q ss_pred HHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 282 NVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 282 ~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
.+++++.++.+.+.+.+.|++++++++++.+..+...+|+|++|
T Consensus 307 ~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 307 RLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred HHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 58899999999887889999999999999999888889999987
No 46
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=100.00 E-value=1.3e-40 Score=295.80 Aligned_cols=308 Identities=29% Similarity=0.432 Sum_probs=263.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
|||+++..++++ +++.+.+.|++.++||+|++.++++|++|+....|.++. ...+|.++|+|++|+|+++|+++..
T Consensus 1 ~ka~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~ 78 (340)
T cd05284 1 MKAARLYEYGKP--LRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDG 78 (340)
T ss_pred CeeeEeccCCCC--ceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCc
Confidence 899999987654 888899999999999999999999999999998887653 3455788999999999999999999
Q ss_pred CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (325)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (325)
|++||+|+++. .+|+|++|+.++.++++++|+++++++++.++..+.+||.++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l 158 (340)
T cd05284 79 LKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAV 158 (340)
T ss_pred CcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHH
Confidence 99999998763 258999999999999999999999999999999999999998
Q ss_pred Hhh-cCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcc
Q 020487 132 FMT-SHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGV 209 (325)
Q Consensus 132 ~~~-~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (325)
... ..+.++++++|+|+ +.+|++++++|+..| ++|+++++++++.+.++++|++++++++.. +.+.+.+.+++.++
T Consensus 159 ~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~i~~~~~~~~~ 236 (340)
T cd05284 159 KKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASDD-VVEEVRELTGGRGA 236 (340)
T ss_pred HHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCcc-HHHHHHHHhCCCCC
Confidence 665 46888999999996 669999999999999 799999999999999999999999888776 77788888877789
Q ss_pred cEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487 210 DVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 288 (325)
Q Consensus 210 d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
|+++||+|+ ..+..++++++++|+++.+|.... ..++....+.+++++.+..... ...++.+++++.
T Consensus 237 dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~l~ 304 (340)
T cd05284 237 DAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH--GRLPTSDLVPTEISVIGSLWGT----------RAELVEVVALAE 304 (340)
T ss_pred CEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC--CccCHHHhhhcceEEEEEeccc----------HHHHHHHHHHHH
Confidence 999999996 567888999999999999986543 2344444456888888764321 123445788899
Q ss_pred CCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 289 VGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 289 ~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+|.+.+ ....|+++++++|++.+.+++..||+++.|
T Consensus 305 ~g~l~~-~~~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 305 SGKVKV-EITKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred hCCCCc-ceEEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 998875 446799999999999999999899999876
No 47
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=100.00 E-value=2.3e-40 Score=292.03 Aligned_cols=319 Identities=29% Similarity=0.403 Sum_probs=273.6
Q ss_pred EcCCCCCc--ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCC
Q 020487 6 ITQPGSPE--VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGD 83 (325)
Q Consensus 6 ~~~~~~~~--~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd 83 (325)
++..+.+. .+++++.+.|++.++||+|++.++++|+.|...+.+..+....+|.++|+|++|+|+++|++++.+++||
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd 82 (323)
T cd05282 3 YTQFGEPLPLVLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQ 82 (323)
T ss_pred eCcCCCCccceEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCC
Confidence 35555554 6888899999999999999999999999999998887654444577899999999999999999999999
Q ss_pred EEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC
Q 020487 84 QVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ 163 (325)
Q Consensus 84 ~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~ 163 (325)
+|+++...|+|++|+.++.+.++++|+++++.+++.++....++|.++.....+.++++++|+|++|.+|++++++|+.+
T Consensus 83 ~V~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~ 162 (323)
T cd05282 83 RVLPLGGEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLL 162 (323)
T ss_pred EEEEeCCCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHC
Confidence 99998746899999999999999999999999999999999999999888888899999999999999999999999999
Q ss_pred CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc
Q 020487 164 GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA 243 (325)
Q Consensus 164 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 243 (325)
|++++++++++++.+.++++|++.+++.....+...+.+.++++++|++++|+|+......+++++++|+++.+|.....
T Consensus 163 g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~ 242 (323)
T cd05282 163 GFKTINVVRRDEQVEELKALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGE 242 (323)
T ss_pred CCeEEEEecChHHHHHHHhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCC
Confidence 99999999999999999999999999887777778888888888999999999998888889999999999999876543
Q ss_pred ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 244 KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
...++...+..+++++.+..+........+....+.++.+++++.++.+.+.+.+.|+++++++|++.+.+++..+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~ 322 (323)
T cd05282 243 PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAEQPGRGGKVLL 322 (323)
T ss_pred CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHhcCCCCceEee
Confidence 33455555555889888877654322112334566777789999999988777899999999999999998888889887
Q ss_pred e
Q 020487 324 V 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 323 ~ 323 (323)
T cd05282 323 T 323 (323)
T ss_pred C
Confidence 4
No 48
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=100.00 E-value=6.7e-40 Score=288.53 Aligned_cols=323 Identities=59% Similarity=0.969 Sum_probs=277.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+.+..+++++.+.|.+.++||+|++.++++|++|+....+.++.....|.++|||++|+|+++|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (323)
T cd05276 1 MKAIVIKEPGGPEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWK 80 (323)
T ss_pred CeEEEEecCCCcccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCC
Confidence 89999998777777888888888889999999999999999999988887655445678999999999999999999999
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+||+|+++..+|+|++|+.++.+.++++|+++++.+++.++.++.+++.++.+...+.++++++|+|+++.+|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~ 160 (323)
T cd05276 81 VGDRVCALLAGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLA 160 (323)
T ss_pred CCCEEEEecCCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHH
Confidence 99999999777999999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
+..|++|+++++++++.+.++++|.+.+++.....+...+.+...++++|++++|.|+..+...++++.++|+++.+|..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~ 240 (323)
T cd05276 161 KALGARVIATAGSEEKLEACRALGADVAINYRTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLL 240 (323)
T ss_pred HHcCCEEEEEcCCHHHHHHHHHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecC
Confidence 99999999999998888888889988888877767777777777667899999999988888889999999999999875
Q ss_pred CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK 320 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk 320 (325)
.......+...++.+++++.++.................++.+.+++.++.+.+..+..|++++++++++.+.++...+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k 320 (323)
T cd05276 241 GGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGK 320 (323)
T ss_pred CCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHhCCCcce
Confidence 54333445555667888888876654322222334556667788899999988778899999999999999998888888
Q ss_pred EEE
Q 020487 321 IML 323 (325)
Q Consensus 321 vvi 323 (325)
+++
T Consensus 321 vv~ 323 (323)
T cd05276 321 IVL 323 (323)
T ss_pred EeC
Confidence 764
No 49
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=100.00 E-value=3.4e-40 Score=292.65 Aligned_cols=316 Identities=26% Similarity=0.381 Sum_probs=258.7
Q ss_pred EEEEEcCC---CCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 2 KAIVITQP---GSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 2 ~a~~~~~~---~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||+++..+ +.++.+++.+.|.|+|+++||+||+.++++|++|...+.+..+.. .+|.++|+|++|+|+++|+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~vG~~v~~ 79 (336)
T TIGR02817 1 KAVGYKKPLPITDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEA-GQPKILGWDAAGVVVAVGDEVTL 79 (336)
T ss_pred CceeeccccCCCCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCC-CCCcccceeeEEEEEEeCCCCCC
Confidence 57788876 677889999999999999999999999999999999888765432 35778999999999999999999
Q ss_pred CCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEEcCCc
Q 020487 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGSS 150 (325)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~vli~g~~g 150 (325)
|++||+|+++. ..|+|++|++++++.++++|+++++++++.++...++||+++....++++ |++++|+|++|
T Consensus 80 ~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g 159 (336)
T TIGR02817 80 FKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAG 159 (336)
T ss_pred CCCCCEEEEcCCCCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCc
Confidence 99999999875 35899999999999999999999999999999999999999978888877 99999999999
Q ss_pred hHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-hHHHHHhhccc
Q 020487 151 GIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSL 228 (325)
Q Consensus 151 ~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l 228 (325)
.+|.+++|+|+.+ |++|++++.++++.+.++++|+++++++.. .+...+.+ .+++++|++++|++ .......++++
T Consensus 160 ~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~~g~~~~~~~~~-~~~~~i~~-~~~~~vd~vl~~~~~~~~~~~~~~~l 237 (336)
T TIGR02817 160 GVGSILIQLARQLTGLTVIATASRPESQEWVLELGAHHVIDHSK-PLKAQLEK-LGLEAVSYVFSLTHTDQHFKEIVELL 237 (336)
T ss_pred HHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHHcCCCEEEECCC-CHHHHHHH-hcCCCCCEEEEcCCcHHHHHHHHHHh
Confidence 9999999999998 999999999999999999999999987554 55666666 45568999999975 46678889999
Q ss_pred cCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHH--HHHHHHHHHHHHHCCcccccccccc---chh
Q 020487 229 NIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALI--VSEVEKNVWPAIAVGKVKPVIYKYL---PLC 303 (325)
Q Consensus 229 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~l~~~~~~~~---~l~ 303 (325)
+++|+++.++.. ...+...+..+++++.+..+........+.. ....++++.+++.++.+++.+...+ +++
T Consensus 238 ~~~G~~v~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~ 313 (336)
T TIGR02817 238 APQGRFALIDDP----AELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKIRTTLAETFGTINAA 313 (336)
T ss_pred ccCCEEEEEccc----ccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCeeccchhccCCCCHH
Confidence 999999988532 2344444555667666543321111111111 1245677889999999887665555 479
Q ss_pred hHHHHHHHHHhCCCceeEEEe
Q 020487 304 EAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 304 ~~~~a~~~~~~~~~~gkvvi~ 324 (325)
++++|++.+.+++..||++++
T Consensus 314 ~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 314 NLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred HHHHHHHHHHcCCccceEEEe
Confidence 999999999999888998874
No 50
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=100.00 E-value=7.5e-40 Score=289.06 Aligned_cols=316 Identities=22% Similarity=0.322 Sum_probs=259.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||++++.+++++.+++++.+.|.+.++||+|++.++++|++|+..+.|..+....+|.++|||++|+|+++ +++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~ 78 (325)
T cd05280 1 FKALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFR 78 (325)
T ss_pred CceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCC
Confidence 899999998876779999999999999999999999999999999998876544445778999999999998 456799
Q ss_pred CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc--CCC-CCCEEEEEcCCch
Q 020487 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS--HLS-PGESFLVHGGSSG 151 (325)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~--~~~-~~~~vli~g~~g~ 151 (325)
+||+|++.. .+|+|++|+.++++.++++|+++++.+++.+++.+.++|.++.... ++. .+++++|+|++|.
T Consensus 79 ~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (325)
T cd05280 79 EGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGG 158 (325)
T ss_pred CCCEEEEcccccCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccH
Confidence 999999864 3689999999999999999999999999999999999999885543 335 3579999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (325)
Q Consensus 152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (325)
+|++++++|+.+|++|+++++++++++.++++|++++++.... .....+....+++|+++||.++..+...+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~ 236 (325)
T cd05280 159 VGSIAVAILAKLGYTVVALTGKEEQADYLKSLGASEVLDREDL--LDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYG 236 (325)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEcchhH--HHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCC
Confidence 9999999999999999999999999999999999888875542 22334444555799999999998889999999999
Q ss_pred CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 311 (325)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~ 311 (325)
|+++.+|.........+...++.+++++.+........ ....+.++.+.+++..+ +...+..+|++++++++++.
T Consensus 237 g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~a~~~ 311 (325)
T cd05280 237 GVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPM----ELRKQVWQKLATEWKPD-LLEIVVREISLEELPEAIDR 311 (325)
T ss_pred CEEEEEecCCCCccccccchheeeeeEEEEEEeecCch----hHHHHHHHHHHHHHhcC-CccceeeEecHHHHHHHHHH
Confidence 99999987654333444455556888888876543221 12234445566666666 44457899999999999999
Q ss_pred HHhCCCceeEEEeC
Q 020487 312 MESSQHIGKIMLVP 325 (325)
Q Consensus 312 ~~~~~~~gkvvi~~ 325 (325)
+.+++..||+|++.
T Consensus 312 ~~~~~~~gk~vv~~ 325 (325)
T cd05280 312 LLAGKHRGRTVVKI 325 (325)
T ss_pred HhcCCcceEEEEeC
Confidence 99999999999863
No 51
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=100.00 E-value=6.8e-40 Score=296.39 Aligned_cols=313 Identities=27% Similarity=0.469 Sum_probs=260.4
Q ss_pred CEEEEEc--CCCCCc-ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC---------CCCCCCCCCCceeEE
Q 020487 1 MKAIVIT--QPGSPE-VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGASPYPGLECSGT 68 (325)
Q Consensus 1 m~a~~~~--~~~~~~-~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~---------~~~~p~~~G~e~~G~ 68 (325)
|||+++. ..+++. .+++++.+.|.++++||+|++.++++|++|++...+.... ....+.++|||++|+
T Consensus 13 ~~a~~~~~~~~g~~~~~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~ 92 (393)
T cd08246 13 MYAFAIRPERYGDPAQAIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGI 92 (393)
T ss_pred hhheeeecccCCCcccceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEE
Confidence 7888775 344443 5899999999999999999999999999999887665110 011134789999999
Q ss_pred EEEecCCCCCCCCCCEEEEEcC----------------------------CceeeeEEeecCCceeeCCCCCCHHhhccC
Q 020487 69 ILSVGKNVSRWKVGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAF 120 (325)
Q Consensus 69 V~~vG~~~~~~~~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l 120 (325)
|+++|++++.+++||+|+.++. +|+|++|+.++...++++|+++++++++.+
T Consensus 93 V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l 172 (393)
T cd08246 93 VWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAY 172 (393)
T ss_pred EEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhh
Confidence 9999999999999999988742 489999999999999999999999999999
Q ss_pred cchHHHHHHHHHhh--cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc----
Q 020487 121 PEVACTVWSTVFMT--SHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE---- 194 (325)
Q Consensus 121 ~~~~~~a~~~l~~~--~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---- 194 (325)
+.++.+||+++... ++++++++++|+|++|.+|++++++|+.+|+++++++.++++.+.++++|++.+++.+..
T Consensus 173 ~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~ 252 (393)
T cd08246 173 MLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWG 252 (393)
T ss_pred cccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEccccccccc
Confidence 99999999998654 678999999999999999999999999999999999999999999999999988875332
Q ss_pred ------------------hHHHHHHHHhCCC-cccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhh
Q 020487 195 ------------------DFVARVKEETGGK-GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (325)
Q Consensus 195 ------------------~~~~~~~~~~~~~-~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (325)
.+.+.+.+.+++. ++|++|||+|...+..++++++++|+++.+|........++...++.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~ 332 (393)
T cd08246 253 VLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMR 332 (393)
T ss_pred ccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhh
Confidence 2456677788877 899999999988788899999999999999865543334556666677
Q ss_pred ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC-CCceeEEE
Q 020487 256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS-QHIGKIML 323 (325)
Q Consensus 256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi 323 (325)
+.++.+...... +.++.+++++.++.+.+.++++|+++++++|++.+.++ +..||+++
T Consensus 333 ~~~i~g~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv 391 (393)
T cd08246 333 QKRIQGSHFAND----------REAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAV 391 (393)
T ss_pred eeEEEecccCcH----------HHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEE
Confidence 888877654321 12344788899999887778999999999999999988 78889876
No 52
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=100.00 E-value=1.4e-39 Score=293.24 Aligned_cols=309 Identities=29% Similarity=0.447 Sum_probs=259.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|||+++..++ .+++++.+.|.|. ++||+||+.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++++
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~-~~p~~~G~e~~G~V~~vG~~v~~~ 76 (386)
T cd08283 1 MKALVWHGKG---DVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGM-KKGDILGHEFMGVVEEVGPEVRNL 76 (386)
T ss_pred CeeEEEecCC---CceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCC-CCCccccccceEEEEEeCCCCCCC
Confidence 9999998653 4889999999884 9999999999999999999999987653 357889999999999999999999
Q ss_pred CCCCEEEEEc-----------------------------------------------CCceeeeEEeecCC--ceeeCCC
Q 020487 80 KVGDQVCALL-----------------------------------------------GGGGYAEKVAVPAG--QVLPVPS 110 (325)
Q Consensus 80 ~~Gd~V~~~~-----------------------------------------------~~g~~~~~~~~~~~--~~~~~p~ 110 (325)
++||+|+..+ .+|+|++|++++.+ .++++|+
T Consensus 77 ~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~ 156 (386)
T cd08283 77 KVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPD 156 (386)
T ss_pred CCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCC
Confidence 9999998743 14889999999987 8999999
Q ss_pred CCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEE
Q 020487 111 GVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCI 189 (325)
Q Consensus 111 ~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~ 189 (325)
+++++++++++..+++||+++ ...+++++++|+|+|+ |.+|.+++++|+..|+ +|+++++++++.+.+++++...++
T Consensus 157 ~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~-G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi 234 (386)
T cd08283 157 DLSDEKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGC-GPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETI 234 (386)
T ss_pred CCCHHHHhhhccchhhhHHHH-hhccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEE
Confidence 999999999999999999998 7788999999999976 9999999999999998 599999999999999988444677
Q ss_pred eCCCc-hHHHHHHHHhCCCcccEEEeCCChH----------------------HHHHhhccccCCCEEEEEeccCCcccc
Q 020487 190 NYKTE-DFVARVKEETGGKGVDVILDCMGAS----------------------YFQRNLGSLNIDGRLFIIGTQGGAKTE 246 (325)
Q Consensus 190 ~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~----------------------~~~~~~~~l~~~g~~v~~g~~~~~~~~ 246 (325)
+.... .+.+.+.+.++++++|++|||+|+. .+..++++++++|+++.+|........
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~ 314 (386)
T cd08283 235 NFEEVDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNK 314 (386)
T ss_pred cCCcchHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCc
Confidence 66665 4777788888777899999999753 467788999999999999876543333
Q ss_pred cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCC-CceeEEE
Q 020487 247 LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIML 323 (325)
Q Consensus 247 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi 323 (325)
.+....+.+++++.+.... ..+.++.+++++.++++.+ ++.+.|+++++++|++.+.+++ ..+|+++
T Consensus 315 ~~~~~~~~~~~~i~~~~~~----------~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 384 (386)
T cd08283 315 FPIGAAMNKGLTLRMGQTH----------VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVL 384 (386)
T ss_pred cCHHHHHhCCcEEEeccCC----------chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEe
Confidence 4555567788888886421 1234555888899999876 3568899999999999998876 4689999
Q ss_pred eC
Q 020487 324 VP 325 (325)
Q Consensus 324 ~~ 325 (325)
+|
T Consensus 385 ~~ 386 (386)
T cd08283 385 KP 386 (386)
T ss_pred cC
Confidence 86
No 53
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.7e-39 Score=287.38 Aligned_cols=312 Identities=30% Similarity=0.455 Sum_probs=266.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++ +..+++++.+.|.|.++|++||+.++++|++|...+.+..+.....|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~ 79 (341)
T cd08297 1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK 79 (341)
T ss_pred CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence 9999998777 456999999999999999999999999999999998887765444566889999999999999999999
Q ss_pred CCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+... ..|+|++|+.++.+.++++|+++++.+++.++..+.+||.++.
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~ 159 (341)
T cd08297 80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALK 159 (341)
T ss_pred CCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHH
Confidence 999998742 2588999999999999999999999999999999999999985
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
. .+++++++++|+|+++.+|.+++++|+.+|++|++++.++++.+.++++|++.+++.....+.+.+.+.++++++|++
T Consensus 160 ~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~v 238 (341)
T cd08297 160 K-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAV 238 (341)
T ss_pred h-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEE
Confidence 5 588999999999998889999999999999999999999999998889999999888777778888888877889999
Q ss_pred EeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487 213 LDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 213 i~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 291 (325)
++|.+ .......+++++++|+++.+|........++...+..+++++.+..... .+.++.+++++.++.
T Consensus 239 l~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~ 308 (341)
T cd08297 239 VVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGT----------RQDLQEALEFAARGK 308 (341)
T ss_pred EEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCC----------HHHHHHHHHHHHcCC
Confidence 99665 5667888999999999999986553333455555667888887753321 134455888999999
Q ss_pred cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 292 VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 292 l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.+.+ ..|++++++++++.+..+...||+++++
T Consensus 309 l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 309 VKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred Cccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 87654 6799999999999999998899999874
No 54
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=100.00 E-value=2e-39 Score=290.36 Aligned_cols=310 Identities=28% Similarity=0.383 Sum_probs=260.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++.+ +++++.+.|++.++||+||+.++++|++|++...|.++. .+|.++|+|++|+|+++|+++..++
T Consensus 3 ~~a~~~~~~~~~--~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~ 78 (365)
T cd08278 3 TTAAVVREPGGP--FVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLPT--PLPAVLGHEGAGVVEAVGSAVTGLK 78 (365)
T ss_pred cEEeeeccCCCc--ceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCC
Confidence 799999986654 788899999999999999999999999999999887652 3477899999999999999999999
Q ss_pred CCCEEEEE-------------------------------------------------cCCceeeeEEeecCCceeeCCCC
Q 020487 81 VGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPVPSG 111 (325)
Q Consensus 81 ~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~ 111 (325)
+||+|+.. ...|+|++|+.++++.++++|++
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~ 158 (365)
T cd08278 79 PGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKD 158 (365)
T ss_pred CCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCC
Confidence 99999851 11378999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEe
Q 020487 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCIN 190 (325)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~ 190 (325)
+++++++.++..+.+|+.++.....++++++++|+|+ |.+|++++++|+..|+ +++++++++++.+.++++|++.+++
T Consensus 159 ~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~ 237 (365)
T cd08278 159 VPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVIN 237 (365)
T ss_pred CCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEec
Confidence 9999999999999999999888888999999999976 9999999999999999 5888888999999889999999998
Q ss_pred CCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeeccccccc
Q 020487 191 YKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRS 268 (325)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (325)
....++.+.+.+.+ +.++|+++||+|. ..+..++++++++|+++.+|.... ....++...++.+++++.++......
T Consensus 238 ~~~~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (365)
T cd08278 238 PKEEDLVAAIREIT-GGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV 316 (365)
T ss_pred CCCcCHHHHHHHHh-CCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence 87777777788777 6689999999985 557888999999999999987532 23456666666788888876543221
Q ss_pred chhHHHHHHHHHHHHHHHHHCCcccc-ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 269 TENKALIVSEVEKNVWPAIAVGKVKP-VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~g~l~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
. .+.++.+++++.+|++.. .+...|+++++++|++.+++++.. |++++
T Consensus 317 ---~----~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 317 ---P----QEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred ---h----HHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 1 234455788899998854 345689999999999999887654 88774
No 55
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=100.00 E-value=1.5e-39 Score=287.29 Aligned_cols=317 Identities=21% Similarity=0.291 Sum_probs=251.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++...++++.+++++.+.|.|+++||+||+.++++|++|.....+.......+|.++|||++|+|+++| +..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~ 78 (326)
T cd08289 1 FQALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFK 78 (326)
T ss_pred CeeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCC
Confidence 8999999888877789999999999999999999999999999876653222222347889999999999954 56799
Q ss_pred CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhh--cC-CCCCCEEEEEcCCch
Q 020487 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SH-LSPGESFLVHGGSSG 151 (325)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~-~~~~~~vli~g~~g~ 151 (325)
+||+|+... .+|+|++|+.++++.++++|+++++++++.+++.+.+||.++... .. ..++++++|+|++|.
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~ 158 (326)
T cd08289 79 PGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGG 158 (326)
T ss_pred CCCEEEEcccccCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCch
Confidence 999999875 369999999999999999999999999999999999999887432 23 334789999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (325)
Q Consensus 152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (325)
+|.+++++|+.+|++|+++++++++.+.++++|++.+++.... ..+.+.+. .++++|+++||+|+..+...+++++++
T Consensus 159 vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~-~~~~~~~~-~~~~~d~vld~~g~~~~~~~~~~l~~~ 236 (326)
T cd08289 159 VGSLAVSILAKLGYEVVASTGKADAADYLKKLGAKEVIPREEL-QEESIKPL-EKQRWAGAVDPVGGKTLAYLLSTLQYG 236 (326)
T ss_pred HHHHHHHHHHHCCCeEEEEecCHHHHHHHHHcCCCEEEcchhH-HHHHHHhh-ccCCcCEEEECCcHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999888876554 24444554 345799999999998888999999999
Q ss_pred CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 311 (325)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~ 311 (325)
|+++.+|.......+.+...++.+++++.+.......... ..+.+..+...+....+...+.++|+++++++|++.
T Consensus 237 G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~ 312 (326)
T cd08289 237 GSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMEL----RRRIWRRLATDLKPTQLLNEIKQEITLDELPEALKQ 312 (326)
T ss_pred CEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchH----HHHHHHHHHhhcCccccccccceEeeHHHHHHHHHH
Confidence 9999999764333333455666788998887532211111 122223333333323333456899999999999999
Q ss_pred HHhCCCceeEEEeC
Q 020487 312 MESSQHIGKIMLVP 325 (325)
Q Consensus 312 ~~~~~~~gkvvi~~ 325 (325)
+.+++..||+++++
T Consensus 313 ~~~~~~~gkvvv~~ 326 (326)
T cd08289 313 ILQGRVTGRTVVKL 326 (326)
T ss_pred HhcCcccceEEEeC
Confidence 99999999999864
No 56
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=100.00 E-value=2.1e-39 Score=290.64 Aligned_cols=310 Identities=31% Similarity=0.470 Sum_probs=265.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC--
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR-- 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~-- 78 (325)
|||+++..++.+ +++++.+.|.+.++||+|++.++++|++|+....+.++. .+|.++|||++|+|+.+|+++..
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~--~~p~~~g~e~~G~v~~vG~~~~~~~ 76 (367)
T cd08263 1 MKAAVLKGPNPP--LTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELPF--PPPFVLGHEISGEVVEVGPNVENPY 76 (367)
T ss_pred CeeEEEecCCCC--cEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCCC--CCCcccccccceEEEEeCCCCCCCC
Confidence 899999987643 888899999999999999999999999999998887754 45778999999999999999987
Q ss_pred -CCCCCEEEEE-------------------------------------------------cCCceeeeEEeecCCceeeC
Q 020487 79 -WKVGDQVCAL-------------------------------------------------LGGGGYAEKVAVPAGQVLPV 108 (325)
Q Consensus 79 -~~~Gd~V~~~-------------------------------------------------~~~g~~~~~~~~~~~~~~~~ 108 (325)
|++||+|++. ...|+|++|+.++.+.++++
T Consensus 77 ~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (367)
T cd08263 77 GLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPL 156 (367)
T ss_pred cCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEEC
Confidence 9999999872 13588999999999999999
Q ss_pred CCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCE
Q 020487 109 PSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADV 187 (325)
Q Consensus 109 p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~ 187 (325)
|+++++.+++.++..+++||.++.....++++++++|+| +|.+|++++++|+..|++ |++++.++++.+.++++|++.
T Consensus 157 P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~ 235 (367)
T cd08263 157 PESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATH 235 (367)
T ss_pred CCCCCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCce
Confidence 999999999999999999999998878889999999996 599999999999999997 888888888888888999999
Q ss_pred EEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccc
Q 020487 188 CINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLR 265 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~ 265 (325)
+++.+...+.+.+.+..+++++|+++||+++. .+..++++++++|+++.+|..... ...++...++.+++++.++...
T Consensus 236 v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (367)
T cd08263 236 TVNAAKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315 (367)
T ss_pred EecCCcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCC
Confidence 99888778888888888778899999999987 778889999999999999865432 2345555555678887774211
Q ss_pred cccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 266 SRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
. . .+.++.+.+++.++.+.+. +++.++++++.++++.+++++..||+|+.
T Consensus 316 ~----~-----~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 316 R----P-----RQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred C----c-----HHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 1 1 2345558899999998763 57889999999999999999888999874
No 57
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2.7e-39 Score=288.39 Aligned_cols=310 Identities=22% Similarity=0.333 Sum_probs=254.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++. +++++.+.|.+.++||+||+.++++|++|++...+.++. ...|.++|||++|+|+++|++++.++
T Consensus 1 mka~~~~~~~~---~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~-~~~~~~~G~e~~G~V~~vG~~v~~~~ 76 (351)
T cd08285 1 MKAFAMLGIGK---VGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPG-ERHGMILGHEAVGVVEEVGSEVKDFK 76 (351)
T ss_pred CceEEEccCCc---cEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCC-CCCCcccCcceEEEEEEecCCcCccC
Confidence 99999998764 778889998899999999999999999999988876543 23478999999999999999999999
Q ss_pred CCCEEEEEc------------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHH
Q 020487 81 VGDQVCALL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVW 128 (325)
Q Consensus 81 ~Gd~V~~~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~ 128 (325)
+||+|+... .+|+|++|+.++.+ .++++|+++++++++.++.+++++|
T Consensus 77 ~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~ 156 (351)
T cd08285 77 PGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF 156 (351)
T ss_pred CCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence 999999742 25899999999874 8999999999999999999999999
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (325)
Q Consensus 129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (325)
+++ ....++++++++|+|+ |.+|++++|+|+.+|+ .|+++++++++.+.++++|++++++....++...+.+.++++
T Consensus 157 ~~~-~~~~~~~g~~vlI~g~-g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~ 234 (351)
T cd08285 157 HGA-ELANIKLGDTVAVFGI-GPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGK 234 (351)
T ss_pred HHH-HccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCC
Confidence 996 6778999999999975 9999999999999999 588888888899999999999999888777777888877777
Q ss_pred cccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCc-ccccchHH--HHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 208 GVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITS--LFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 208 ~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
++|+++||+|+ ..+..++++++++|+++.+|..... ...++... ...+..++.+...... .+.++++
T Consensus 235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---------~~~~~~~ 305 (351)
T cd08285 235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGG---------RLRMERL 305 (351)
T ss_pred CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCc---------cccHHHH
Confidence 89999999996 4568889999999999999876542 12223212 1234445554322111 1234448
Q ss_pred HHHHHCCcccc---ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487 284 WPAIAVGKVKP---VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~---~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~ 325 (325)
++++.+|++++ .+...|+++++++|++.+.+++ ...|+++++
T Consensus 306 ~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 306 ASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred HHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 89999999887 3456799999999999998876 357998864
No 58
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4e-39 Score=281.93 Aligned_cols=303 Identities=28% Similarity=0.382 Sum_probs=256.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+ ++.+++++.+.|.+.++||+||+.++++|+.|.+...... .|.++|+|++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~~~-----~~~~~g~e~~G~v~~~G~~v~~~~ 74 (305)
T cd08270 1 MRALVVDPDA-PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAERP-----DGAVPGWDAAGVVERAAADGSGPA 74 (305)
T ss_pred CeEEEEccCC-CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhccCC-----CCCcccceeEEEEEEeCCCCCCCC
Confidence 8999998765 6778899999999999999999999999999998765221 256899999999999999999999
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+||+|+++...|+|++|+.++.+.++++|+++++++++++++.+.+||+++...... +|++++|+|++|.+|.++++++
T Consensus 75 ~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~~~g~~~~~~a 153 (305)
T cd08270 75 VGARVVGLGAMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL-LGRRVLVTGASGGVGRFAVQLA 153 (305)
T ss_pred CCCEEEEecCCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCcHHHHHHHHHH
Confidence 999999987679999999999999999999999999999999999999998665554 5999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
+..|++|+.+++++++.+.++++|++..+.... +..+ +++|+++||+|+..+...+++++++|+++.+|..
T Consensus 154 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~--------~~~~-~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~ 224 (305)
T cd08270 154 ALAGAHVVAVVGSPARAEGLRELGAAEVVVGGS--------ELSG-APVDLVVDSVGGPQLARALELLAPGGTVVSVGSS 224 (305)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEeccc--------cccC-CCceEEEECCCcHHHHHHHHHhcCCCEEEEEecc
Confidence 999999999999999999999999876553222 1122 4799999999998888899999999999999876
Q ss_pred CCcccccchHHHHh--hccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487 241 GGAKTELNITSLFA--KRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 318 (325)
Q Consensus 241 ~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~ 318 (325)
......++...+.. +++++.++.+.. +....+.++.+.+++.++++.+.+.+++++++++++++.+.+++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~ 298 (305)
T cd08270 225 SGEPAVFNPAAFVGGGGGRRLYTFFLYD------GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDEAAEALLARRFR 298 (305)
T ss_pred CCCcccccHHHHhcccccceEEEEEccC------HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHHHHHHHHcCCCC
Confidence 53333445555544 588888776553 1123456677889999999987778899999999999999999988
Q ss_pred eeEEEeC
Q 020487 319 GKIMLVP 325 (325)
Q Consensus 319 gkvvi~~ 325 (325)
||+|+++
T Consensus 299 gkvvi~~ 305 (305)
T cd08270 299 GKAVLDV 305 (305)
T ss_pred ceEEEeC
Confidence 9999864
No 59
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=100.00 E-value=4.2e-39 Score=287.09 Aligned_cols=310 Identities=30% Similarity=0.449 Sum_probs=261.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC-----------CCCCCCCCCCceeEEE
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP-----------PKGASPYPGLECSGTI 69 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~-----------~~~~p~~~G~e~~G~V 69 (325)
|||+++..++.+ +++++.|.|++.++||+|++.++++|++|++.+.|.++. ...+|.++|+|++|+|
T Consensus 1 ~~a~~~~~~~~~--~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V 78 (350)
T cd08240 1 MKAAAVVEPGKP--LEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEV 78 (350)
T ss_pred CeeEEeccCCCC--ceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEE
Confidence 899999887765 788899999999999999999999999999998876542 2234678999999999
Q ss_pred EEecCCCCCCCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487 70 LSVGKNVSRWKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (325)
Q Consensus 70 ~~vG~~~~~~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (325)
+++|++++.+++||+|+++. ..|++++|+.++.+.++++|+++++.+++.+..
T Consensus 79 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~ 158 (350)
T cd08240 79 VAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLAC 158 (350)
T ss_pred EeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhc
Confidence 99999999999999998762 358899999999999999999999999999999
Q ss_pred hHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHH
Q 020487 123 VACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVK 201 (325)
Q Consensus 123 ~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 201 (325)
.+.+||.++.....++++++++|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|++.+++.+...+.+.+.
T Consensus 159 ~~~tA~~~~~~~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 237 (350)
T cd08240 159 SGLTAYSAVKKLMPLVADEPVVIIGA-GGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRII 237 (350)
T ss_pred hhhhHHHHHHhcccCCCCCEEEEECC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHH
Confidence 99999999977777778999999975 9999999999999999 789999899999999999998888877767777777
Q ss_pred HHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487 202 EETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 280 (325)
Q Consensus 202 ~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 280 (325)
+..++ ++|+++||+|. ..+..++++|+++|+++.+|..... ...+...+..+++++.+...... +.+
T Consensus 238 ~~~~~-~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~i~~~~~~~~----------~~~ 305 (350)
T cd08240 238 KAAGG-GVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGE-ATLPLPLLPLRALTIQGSYVGSL----------EEL 305 (350)
T ss_pred HHhCC-CCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCC-CcccHHHHhhcCcEEEEcccCCH----------HHH
Confidence 77766 89999999984 5678889999999999999865532 22334444457788777654321 234
Q ss_pred HHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 281 KNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 281 ~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
..+++++.+|.+++.+...|+++++++|++.+.+++..+|++++|
T Consensus 306 ~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 350 (350)
T cd08240 306 RELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLKP 350 (350)
T ss_pred HHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEecC
Confidence 448889999998876778999999999999999998889999875
No 60
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=100.00 E-value=3.8e-39 Score=291.65 Aligned_cols=314 Identities=27% Similarity=0.453 Sum_probs=262.1
Q ss_pred CEEEEEcC--CCCC-cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC---------CCCCC-CCCCCceeE
Q 020487 1 MKAIVITQ--PGSP-EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP---------PKGAS-PYPGLECSG 67 (325)
Q Consensus 1 m~a~~~~~--~~~~-~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~---------~~~~p-~~~G~e~~G 67 (325)
|||+++.. .+++ +.+++++.+.|.|+++||+|++.++++|.+|.+...+.... ....| .++|||++|
T Consensus 8 ~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G 87 (398)
T TIGR01751 8 MYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASG 87 (398)
T ss_pred hhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEE
Confidence 89999964 6655 56999999999999999999999999999998876553210 00113 378999999
Q ss_pred EEEEecCCCCCCCCCCEEEEEc----------------------------CCceeeeEEeecCCceeeCCCCCCHHhhcc
Q 020487 68 TILSVGKNVSRWKVGDQVCALL----------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAA 119 (325)
Q Consensus 68 ~V~~vG~~~~~~~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~ 119 (325)
+|+++|++++.+++||+|+..+ .+|+|++|+.++.+.++++|+++++++++.
T Consensus 88 ~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~ 167 (398)
T TIGR01751 88 VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAAC 167 (398)
T ss_pred EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhh
Confidence 9999999999999999998864 258999999999999999999999999999
Q ss_pred CcchHHHHHHHHHh--hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCc---
Q 020487 120 FPEVACTVWSTVFM--TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTE--- 194 (325)
Q Consensus 120 l~~~~~~a~~~l~~--~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--- 194 (325)
+.....+||.++.. ..++.++++++|+|++|.+|++++++++.+|++++++++++++.+.++++|++.+++....
T Consensus 168 ~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~ 247 (398)
T TIGR01751 168 PGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHW 247 (398)
T ss_pred ccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchh
Confidence 99999999999854 4678999999999999999999999999999999999989999999999999988876432
Q ss_pred -------------------hHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhh
Q 020487 195 -------------------DFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAK 255 (325)
Q Consensus 195 -------------------~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~ 255 (325)
.+...+.+.++++++|++|||+|...+...+++++++|+++.+|........++...++.+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 327 (398)
T TIGR01751 248 GRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMR 327 (398)
T ss_pred hccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhc
Confidence 2445566777777899999999988888899999999999999876654345556666667
Q ss_pred ccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+.++.++..... +.++.+.+++.++.+.+.+++++++++++++++.+.+++..||+|++
T Consensus 328 ~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 386 (398)
T TIGR01751 328 QKRIQGSHFANL----------REAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVL 386 (398)
T ss_pred ccEEEccccCcH----------HHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEE
Confidence 777777644321 12344888899999988788999999999999999999988999875
No 61
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=6.9e-39 Score=283.42 Aligned_cols=314 Identities=29% Similarity=0.427 Sum_probs=264.3
Q ss_pred CEEEEEcCCCC--CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGS--PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~--~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
|||+.+..++. ++.+++++.+.|.+.++|++||+.++++|++|++...|..+....+|.++|+|++|+|+.+|++++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 81 (329)
T cd08250 2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD 81 (329)
T ss_pred ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence 89999998877 6778999999999999999999999999999999988876544456889999999999999999999
Q ss_pred CCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487 79 WKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (325)
Q Consensus 79 ~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~ 158 (325)
+++||+|+++. .|+|++|+.++.+.++++|++ ..+++.++.++.+||+++.+..+++++++++|+|++|.+|.++++
T Consensus 82 ~~~Gd~V~~~~-~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~ 158 (329)
T cd08250 82 FKVGDAVATMS-FGAFAEYQVVPARHAVPVPEL--KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQ 158 (329)
T ss_pred CCCCCEEEEec-CcceeEEEEechHHeEECCCC--cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHH
Confidence 99999999885 488999999999999999997 346778999999999999777889999999999999999999999
Q ss_pred HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEe
Q 020487 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g 238 (325)
+++..|++|+++++++++.+.++++|++.+++.+...+.+.+....+ +++|+++||+|+..+..++++++++|+++.+|
T Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~-~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g 237 (329)
T cd08250 159 LAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYP-KGVDVVYESVGGEMFDTCVDNLALKGRLIVIG 237 (329)
T ss_pred HHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCCCccHHHHHHHhcC-CCCeEEEECCcHHHHHHHHHHhccCCeEEEEe
Confidence 99999999999999999999999999988888777666666666554 68999999999988889999999999999998
Q ss_pred ccCCcc----------cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccc--cccccchhhHH
Q 020487 239 TQGGAK----------TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPV--IYKYLPLCEAA 306 (325)
Q Consensus 239 ~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~--~~~~~~l~~~~ 306 (325)
...... ..++ ...+.+++++.+..+..... ...+.++.+.+++.++.+.+. ....+++++++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 311 (329)
T cd08250 238 FISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFFLPHYAK-----LIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVA 311 (329)
T ss_pred cccCCcccCccccccccccc-HHHhhcCceEEEEEhHHHHH-----HHHHHHHHHHHHHHCCCeeeeECCccccCHHHHH
Confidence 764321 1112 23456788888776532211 134566668899999988763 35669999999
Q ss_pred HHHHHHHhCCCceeEEEe
Q 020487 307 EAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 307 ~a~~~~~~~~~~gkvvi~ 324 (325)
+|++.+.+++..+|++++
T Consensus 312 ~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 312 DAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHcCCCCceEEeC
Confidence 999999988888898874
No 62
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=100.00 E-value=4.3e-39 Score=286.79 Aligned_cols=309 Identities=28% Similarity=0.445 Sum_probs=258.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
||++++..++. +++.+.+.|.| .++||+||+.++++|++|++.+.|.++. ..+|.++|+|++|+|+++|++++++
T Consensus 1 ~ka~~~~~~~~---~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~~ 76 (347)
T cd05278 1 MKALVYLGPGK---IGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPG-AKHGMILGHEFVGEVVEVGSDVKRL 76 (347)
T ss_pred CceEEEecCCc---eEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCC-CCCCceeccceEEEEEEECCCcccc
Confidence 89999987654 88889999999 9999999999999999999999887764 3447899999999999999999999
Q ss_pred CCCCEEEEE------------------------------cCCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHH
Q 020487 80 KVGDQVCAL------------------------------LGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTV 127 (325)
Q Consensus 80 ~~Gd~V~~~------------------------------~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a 127 (325)
++||+|++. ..+|+|++|++++.+ .++++|+++++++++.++..+.+|
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta 156 (347)
T cd05278 77 KPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG 156 (347)
T ss_pred CCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence 999999872 125899999999987 899999999999999999999999
Q ss_pred HHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 128 WSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 128 ~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
|+++ ...+++++++|+|.|+ |.+|.+++|+|+.+|+ +++++.+++++.+.++++|++.+++.+...+.+.+.+.+++
T Consensus 157 ~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~ 234 (347)
T cd05278 157 FHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGG 234 (347)
T ss_pred eehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCC
Confidence 9998 6778999999999875 9999999999999997 88888888888888889999999988877777888888777
Q ss_pred CcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487 207 KGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 285 (325)
Q Consensus 207 ~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
+++|+++||+++ ..+..++++|+++|+++.+|..............+.+++++.+..... .+.++.+.+
T Consensus 235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ 304 (347)
T cd05278 235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPV----------RARMPELLD 304 (347)
T ss_pred CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCc----------hhHHHHHHH
Confidence 789999999987 567888999999999999986543211111122335677776643211 234555888
Q ss_pred HHHCCccccc--cccccchhhHHHHHHHHHhCCC-ceeEEEeC
Q 020487 286 AIAVGKVKPV--IYKYLPLCEAAEAHQLMESSQH-IGKIMLVP 325 (325)
Q Consensus 286 ~~~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvi~~ 325 (325)
++.++.+++. +...|++++++++++.+..++. .+|++++|
T Consensus 305 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~~ 347 (347)
T cd05278 305 LIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIRP 347 (347)
T ss_pred HHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEecC
Confidence 9999998763 5688999999999999987776 68999886
No 63
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.5e-38 Score=281.90 Aligned_cols=313 Identities=34% Similarity=0.555 Sum_probs=271.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++.+.+.++.+++++.+.|.+.++|++|++.++++|++|++...|.++.....|.++|||++|+|+++|+++++++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (336)
T cd08276 1 MKAWRLSGGGGLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFK 80 (336)
T ss_pred CeEEEEeccCCCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCC
Confidence 99999998766667888888888889999999999999999999998887665444577899999999999999999999
Q ss_pred CCCEEEEEcC---------------------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC
Q 020487 81 VGDQVCALLG---------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP 139 (325)
Q Consensus 81 ~Gd~V~~~~~---------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~ 139 (325)
+||+|++... +|+|++|+.++.+.++++|+++++.+++.+..++.+||+++.....+++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~ 160 (336)
T cd08276 81 VGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKP 160 (336)
T ss_pred CCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCC
Confidence 9999998751 5889999999999999999999999999999999999999877788999
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCcccEEEeCCCh
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
|++++|+| +|.+|++++++++..|++|++++.++++.+.++++|.+.+++... ..+...+.+.++++++|++++|++.
T Consensus 161 g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 239 (336)
T cd08276 161 GDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGP 239 (336)
T ss_pred CCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCCh
Confidence 99999996 599999999999999999999999999999998899988888776 6677788888887899999999998
Q ss_pred HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccccccc
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYK 298 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 298 (325)
..+..++++++++|+++.+|.........+...++.+++++.+..... ...++++.+++.++.+.+....
T Consensus 240 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~l~~~~~~ 309 (336)
T cd08276 240 GTLAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGS----------RAQFEAMNRAIEAHRIRPVIDR 309 (336)
T ss_pred HHHHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCc----------HHHHHHHHHHHHcCCcccccCc
Confidence 888889999999999999987654333455566677899988876532 2344457788888888777778
Q ss_pred ccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 299 YLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 299 ~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.+++++++++++.+.+++..+|++++
T Consensus 310 ~~~~~~~~~a~~~~~~~~~~~kvv~~ 335 (336)
T cd08276 310 VFPFEEAKEAYRYLESGSHFGKVVIR 335 (336)
T ss_pred EEeHHHHHHHHHHHHhCCCCceEEEe
Confidence 99999999999999988888899875
No 64
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=100.00 E-value=7.8e-39 Score=284.87 Aligned_cols=309 Identities=30% Similarity=0.499 Sum_probs=264.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++.+ +++++.+.|.+.++||+||+.++++|++|+....|..+. ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~~G~~~~~~~ 77 (345)
T cd08260 1 MRAAVYEEFGEP--LEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPD-VTLPHVPGHEFAGVVVEVGEDVSRWR 77 (345)
T ss_pred CeeEEEecCCCC--cEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCC-CCCCeeeccceeEEEEEECCCCccCC
Confidence 999999987765 888899999999999999999999999999998887653 24577899999999999999999999
Q ss_pred CCCEEEE---------------------------EcCCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (325)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (325)
+||+|++ +..+|+|++|+.++.. .++++|+++++++++.++.++++||+++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l 157 (345)
T cd08260 78 VGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRAL 157 (345)
T ss_pred CCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHH
Confidence 9999986 3346899999999975 8999999999999999999999999998
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCccc
Q 020487 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (325)
Q Consensus 132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (325)
....++.++++++|+| .|.+|++++++|+..|++|+++++++++.+.++++|++.+++.+. .++...+.+..++ ++|
T Consensus 158 ~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~-~~d 235 (345)
T cd08260 158 VHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGG-GAH 235 (345)
T ss_pred HHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCC-CCC
Confidence 7778899999999999 599999999999999999999999999999999999999998877 6777777777776 899
Q ss_pred EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcc--cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 287 (325)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
++|+|+|. ..+...+++++++|+++.+|...... ..++...+..+++++.+..... ...++.+++++
T Consensus 236 ~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~ 305 (345)
T cd08260 236 VSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMP----------AHRYDAMLALI 305 (345)
T ss_pred EEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCC----------HHHHHHHHHHH
Confidence 99999984 56778899999999999998765432 3445555667888888865421 12444588899
Q ss_pred HCCccccc--cccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 288 AVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 288 ~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.++.+.+. +...++++++++|++.+.+++..+|+|+.
T Consensus 306 ~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 306 ASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 99988753 57899999999999999999888998874
No 65
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=100.00 E-value=1.1e-38 Score=281.39 Aligned_cols=313 Identities=23% Similarity=0.348 Sum_probs=257.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||+++...+.++.+++++.|.|.+.++||+||+.++++|++|+..+.|..+....+|.++|||++|+|+. +++..|++
T Consensus 1 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~ 78 (323)
T TIGR02823 1 KALVVEKEDGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFRE 78 (323)
T ss_pred CeEEEccCCCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCC
Confidence 6889998887778999999999999999999999999999999999887643334578899999999998 56678999
Q ss_pred CCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhh--cCCCCCC-EEEEEcCCchH
Q 020487 82 GDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMT--SHLSPGE-SFLVHGGSSGI 152 (325)
Q Consensus 82 Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~--~~~~~~~-~vli~g~~g~~ 152 (325)
||+|+++. .+|++++|+.++.+.++++|+++++++++.++..+.+++.++... ..+.+++ +++|+|++|.+
T Consensus 79 Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~v 158 (323)
T TIGR02823 79 GDEVIVTGYGLGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGV 158 (323)
T ss_pred CCEEEEccCCCCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHH
Confidence 99999875 368999999999999999999999999999999999998876433 3478898 99999999999
Q ss_pred HHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCC
Q 020487 153 GTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDG 232 (325)
Q Consensus 153 G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g 232 (325)
|.+++++|+.+|+++++++.++++++.++++|++.+++...... .+....++ ++|+++||+|++.+...+++++++|
T Consensus 159 g~~~~~la~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~d~vld~~g~~~~~~~~~~l~~~G 235 (323)
T TIGR02823 159 GSLAVAILSKLGYEVVASTGKAEEEDYLKELGASEVIDREDLSP--PGKPLEKE-RWAGAVDTVGGHTLANVLAQLKYGG 235 (323)
T ss_pred HHHHHHHHHHcCCeEEEEeCCHHHHHHHHhcCCcEEEccccHHH--HHHHhcCC-CceEEEECccHHHHHHHHHHhCCCC
Confidence 99999999999999999998888889899999988887654332 34444443 5999999999988888999999999
Q ss_pred EEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHH
Q 020487 233 RLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLM 312 (325)
Q Consensus 233 ~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~ 312 (325)
+++.+|.........+...++.+++++.+........ ....+.++.+.+++..+.+... ...|+++++++|++.+
T Consensus 236 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~~~a~~~~ 310 (323)
T TIGR02823 236 AVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPM----ALREAAWQRLATDLKPRNLESI-TREITLEELPEALEQI 310 (323)
T ss_pred EEEEEcccCCCCccccHHHHhhcceEEEEEeccccCc----hhHHHHHHHHHHHhhcCCCcCc-eeeecHHHHHHHHHHH
Confidence 9999997653333344455657888888865432211 2223455557777778887654 4689999999999999
Q ss_pred HhCCCceeEEEe
Q 020487 313 ESSQHIGKIMLV 324 (325)
Q Consensus 313 ~~~~~~gkvvi~ 324 (325)
.+++..+|+|++
T Consensus 311 ~~~~~~~k~vv~ 322 (323)
T TIGR02823 311 LAGQHRGRTVVD 322 (323)
T ss_pred hCCCccceEEEe
Confidence 999999999875
No 66
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=100.00 E-value=2.5e-38 Score=278.93 Aligned_cols=324 Identities=60% Similarity=0.976 Sum_probs=277.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++.+..++.+..+++++.+.+++++++++|++.++++|++|+....+.++....+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~ 80 (325)
T TIGR02824 1 MKAIEITEPGGPEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWK 80 (325)
T ss_pred CceEEEccCCCcccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCC
Confidence 89999988777777888888777789999999999999999999988776654444577899999999999999999999
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+||+|+++..+|+|++|+.++...++++|+++++.++++++.+..++|.++.+...++++++++|+|+++.+|.++++++
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a 160 (325)
T TIGR02824 81 VGDRVCALVAGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLA 160 (325)
T ss_pred CCCEEEEccCCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHH
Confidence 99999998777999999999999999999999999999999999999999878889999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
+..|++|+++++++++.+.++.+|.+.+++.....+...+.....++++|++++|+|...+...+++++++|+++.+|..
T Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
T TIGR02824 161 KAFGARVFTTAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQ 240 (325)
T ss_pred HHcCCEEEEEeCCHHHHHHHHHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecC
Confidence 99999999999999888888888888887777666777777777767899999999988788889999999999999875
Q ss_pred CCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCcee
Q 020487 241 GGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGK 320 (325)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gk 320 (325)
......++...++.+++++.+...........+......+.++++++.++.+.+..+..+++++++++++.+.++...+|
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (325)
T TIGR02824 241 GGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPLEDAAQAHALMESGDHIGK 320 (325)
T ss_pred CCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeHHHHHHHHHHHHhCCCcce
Confidence 43222455666667899999887655322233334556677788999999988778889999999999999998888889
Q ss_pred EEEe
Q 020487 321 IMLV 324 (325)
Q Consensus 321 vvi~ 324 (325)
++++
T Consensus 321 ~v~~ 324 (325)
T TIGR02824 321 IVLT 324 (325)
T ss_pred EEEe
Confidence 8875
No 67
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=100.00 E-value=1.1e-38 Score=285.42 Aligned_cols=310 Identities=25% Similarity=0.363 Sum_probs=262.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++++ +++++.+.|++.++||+|++.++++|++|+..+.|.++. .+|.++|+|++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~~ 76 (363)
T cd08279 1 MRAAVLHEVGKP--LEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLPA--PLPAVLGHEGAGVVEEVGPGVTGVK 76 (363)
T ss_pred CeEEEEecCCCC--ceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCCC--CCCccccccceEEEEEeCCCccccC
Confidence 899999988755 888999999999999999999999999999998887753 3467899999999999999999999
Q ss_pred CCCEEEEE-----------------------------------------------cCCceeeeEEeecCCceeeCCCCCC
Q 020487 81 VGDQVCAL-----------------------------------------------LGGGGYAEKVAVPAGQVLPVPSGVS 113 (325)
Q Consensus 81 ~Gd~V~~~-----------------------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~ 113 (325)
+||+|++. ...|+|++|+.++.+.++++|++++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~ 156 (363)
T cd08279 77 PGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIP 156 (363)
T ss_pred CCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCC
Confidence 99999983 2358899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC
Q 020487 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (325)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (325)
+++++.+++...+||.++....+++++++++|+|+ |.+|.+++++++..|++ |++++.++++.+.++++|++++++.+
T Consensus 157 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~-g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~ 235 (363)
T cd08279 157 LDRAALLGCGVTTGVGAVVNTARVRPGDTVAVIGC-GGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNAS 235 (363)
T ss_pred hHHeehhcchhHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCC
Confidence 99999999999999999888888999999999975 99999999999999996 99999999999988899999999888
Q ss_pred CchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccch
Q 020487 193 TEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTE 270 (325)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 270 (325)
...+...+.+.+.++++|+++||+++ ..+...+++++++|+++.+|.... ....++...+..++..+.++.+....
T Consensus 236 ~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 313 (363)
T cd08279 236 EDDAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSAN-- 313 (363)
T ss_pred CccHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcC--
Confidence 77777888888766789999999994 567888999999999999986542 23345555555567777776543321
Q ss_pred hHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEE
Q 020487 271 NKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIM 322 (325)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvv 322 (325)
..+.++++++++.++.+.+ .+.++|+++++++|++.+.+++..+.+|
T Consensus 314 -----~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 314 -----PRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred -----cHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 1234555888999999876 3678899999999999999888765555
No 68
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=100.00 E-value=2.4e-38 Score=278.97 Aligned_cols=320 Identities=35% Similarity=0.567 Sum_probs=274.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+.+..+++.+.+.|.+.+++|+|++.++++|++|+..+.|..+.....|.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~ 80 (325)
T cd08253 1 MRAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLK 80 (325)
T ss_pred CceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCC
Confidence 89999988776666888999999999999999999999999999988887654445678899999999999999999999
Q ss_pred CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
+||+|+++. ..|++++|+.++.+.++++|+++++.+++.++++..++|+++....++.+|++++|+|+++.+|.+
T Consensus 81 ~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~ 160 (325)
T cd08253 81 VGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHA 160 (325)
T ss_pred CCCEEEEeccccCCCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHH
Confidence 999999986 358999999999999999999999999999999999999998777889999999999999999999
Q ss_pred HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (325)
++++++..|++|+++++++++.+.++++|++.+++.....+...+.+.+.++++|++++|.+.......+++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (325)
T cd08253 161 AVQLARWAGARVIATASSAEGAELVRQAGADAVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIV 240 (325)
T ss_pred HHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEE
Confidence 99999999999999999999999888899988888777777777887777778999999999988888889999999999
Q ss_pred EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 315 (325)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~ 315 (325)
.+|... .....+..+++.+++++.+...... .+....+.++.+.+++.++.+.+.....+++++++++++.+.++
T Consensus 241 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 315 (325)
T cd08253 241 VYGSGG-LRGTIPINPLMAKEASIRGVLLYTA----TPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESG 315 (325)
T ss_pred EEeecC-CcCCCChhHHHhcCceEEeeehhhc----CHHHHHHHHHHHHHHHHCCCccCccccEEcHHHHHHHHHHHHcC
Confidence 998754 2334455555567777766553322 12234556666778888888887778999999999999999998
Q ss_pred CCceeEEEeC
Q 020487 316 QHIGKIMLVP 325 (325)
Q Consensus 316 ~~~gkvvi~~ 325 (325)
...+|++++|
T Consensus 316 ~~~~kvv~~~ 325 (325)
T cd08253 316 GAIGKVVLDP 325 (325)
T ss_pred CCcceEEEeC
Confidence 8889999875
No 69
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=100.00 E-value=3.3e-38 Score=277.36 Aligned_cols=320 Identities=36% Similarity=0.522 Sum_probs=272.3
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||+....++.+..+++.+.+.+.+.++||+|++.++++|++|+....+.++. .+|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~--~~~~~~g~e~~G~v~~~g~~~~~~~~ 78 (320)
T cd05286 1 KAVRIHKTGGPEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYPL--PLPFVLGVEGAGVVEAVGPGVTGFKV 78 (320)
T ss_pred CeEEEecCCCccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCCC--CCCccCCcceeEEEEEECCCCCCCCC
Confidence 5777777777667888888887789999999999999999999998887653 34678999999999999999999999
Q ss_pred CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (325)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~ 161 (325)
||+|+++...|+|++|+.++.+.++++|+++++.+++.++....+++.++....++++|++++|+|++|.+|++++++++
T Consensus 79 G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~ 158 (320)
T cd05286 79 GDRVAYAGPPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAK 158 (320)
T ss_pred CCEEEEecCCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHH
Confidence 99999985358899999999999999999999999999999999999998788889999999999988999999999999
Q ss_pred HCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 162 CQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 162 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+|++|++++.++++.+.++++|++.+++.....+...+.+.+.++++|++++|.++......+++++++|+++.+|...
T Consensus 159 ~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~ 238 (320)
T cd05286 159 ALGATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNAS 238 (320)
T ss_pred HcCCEEEEEcCCHHHHHHHHHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCC
Confidence 99999999999999999999999988888777777778888887778999999999887888899999999999998755
Q ss_pred CcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeE
Q 020487 242 GAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKI 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 321 (325)
.....++...+..+++++.+....... ..+....+.++.+.+++.++.+.+...+.|++++++++++.+.++...+|+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~v 316 (320)
T cd05286 239 GPVPPFDLLRLSKGSLFLTRPSLFHYI--ATREELLARAAELFDAVASGKLKVEIGKRYPLADAAQAHRDLESRKTTGKL 316 (320)
T ss_pred CCCCccCHHHHHhcCcEEEEEehhhhc--CCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHHHHHHHHHcCCCCceE
Confidence 432334444444678887755433222 122344556677889999998887777899999999999999998888999
Q ss_pred EEeC
Q 020487 322 MLVP 325 (325)
Q Consensus 322 vi~~ 325 (325)
+++|
T Consensus 317 v~~~ 320 (320)
T cd05286 317 LLIP 320 (320)
T ss_pred EEeC
Confidence 9987
No 70
>PRK10083 putative oxidoreductase; Provisional
Probab=100.00 E-value=2.4e-38 Score=281.07 Aligned_cols=304 Identities=25% Similarity=0.339 Sum_probs=246.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++ .+++++.+.|+|.++|++||+.++++|++|++.+.|..+.. .+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~-~~p~i~G~e~~G~V~~vG~~v~~~~ 76 (339)
T PRK10083 1 MKSIVIEKPN---SLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFA-KYPRVIGHEFFGVIDAVGEGVDAAR 76 (339)
T ss_pred CeEEEEecCC---eeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcC-CCCcccccceEEEEEEECCCCccCC
Confidence 8999998765 38999999999999999999999999999999988876543 3578999999999999999999999
Q ss_pred CCCEEE---------------------------EEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVC---------------------------ALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~---------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+ ++..+|+|++|+.++.+.++++|+++++++++ +..++.+++.+ ..
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~-~~ 154 (339)
T PRK10083 77 IGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV-TG 154 (339)
T ss_pred CCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH-HH
Confidence 999998 34346899999999999999999999998876 55677888854 47
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHH-CCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKC-QGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~-~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
..++++|++|+|+|+ |.+|++++|+|+. +|++ ++++++++++.+.++++|++.+++.....+.+.+.. .+.++|+
T Consensus 155 ~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~--~g~~~d~ 231 (339)
T PRK10083 155 RTGPTEQDVALIYGA-GPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEE--KGIKPTL 231 (339)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhc--CCCCCCE
Confidence 778999999999995 9999999999997 5995 777778888999999999999988776665555532 1234679
Q ss_pred EEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487 212 ILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 290 (325)
Q Consensus 212 vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (325)
+|||+|. ..+..++++++++|+++.+|.... ...++...+..+++++.+.... .+.++.+++++.+|
T Consensus 232 vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~g 299 (339)
T PRK10083 232 IIDAACHPSILEEAVTLASPAARIVLMGFSSE-PSEIVQQGITGKELSIFSSRLN-----------ANKFPVVIDWLSKG 299 (339)
T ss_pred EEECCCCHHHHHHHHHHhhcCCEEEEEccCCC-CceecHHHHhhcceEEEEEecC-----------hhhHHHHHHHHHcC
Confidence 9999995 467888999999999999987543 2233444444566666654321 12344588999999
Q ss_pred cccc--ccccccchhhHHHHHHHHHhCC-CceeEEEeC
Q 020487 291 KVKP--VIYKYLPLCEAAEAHQLMESSQ-HIGKIMLVP 325 (325)
Q Consensus 291 ~l~~--~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi~~ 325 (325)
.+++ ++.+.|+++++++|++.+.++. ..+|+++.+
T Consensus 300 ~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~ 337 (339)
T PRK10083 300 LIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTF 337 (339)
T ss_pred CCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEec
Confidence 9887 4689999999999999998653 458998864
No 71
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=100.00 E-value=6.1e-39 Score=279.72 Aligned_cols=318 Identities=40% Similarity=0.560 Sum_probs=253.2
Q ss_pred EEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC---CCCCCC---CCceeEEEEEec-CC
Q 020487 3 AIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK---GASPYP---GLECSGTILSVG-KN 75 (325)
Q Consensus 3 a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~---~~p~~~---G~e~~G~V~~vG-~~ 75 (325)
.......+..+....++.++|.|.++|+++++.++++|+.|+.+..|...... .+|.++ |.+.+|.+...| ..
T Consensus 8 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~ 87 (347)
T KOG1198|consen 8 VSLVSPPGGGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDV 87 (347)
T ss_pred EEEeccCCCcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEecccccc
Confidence 44445555566677889999999999999999999999999999999887655 667444 444455566666 44
Q ss_pred CCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc------CCCCCCEEEEEcCC
Q 020487 76 VSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS------HLSPGESFLVHGGS 149 (325)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~------~~~~~~~vli~g~~ 149 (325)
+..+..||.++.....|+|++|.++++..++++|++++++++|+++.++.+||.++.... ++++|++|||+|++
T Consensus 88 ~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggs 167 (347)
T KOG1198|consen 88 VGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGS 167 (347)
T ss_pred ccceEeeeEEeeccCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCC
Confidence 567888999988888999999999999999999999999999999999999999999998 89999999999999
Q ss_pred chHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhcccc
Q 020487 150 SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLN 229 (325)
Q Consensus 150 g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~ 229 (325)
|++|++++|+|++.|+..+++++++++.++++++|+++++|+++.++.+.+.+.+ +++||+||||+|+........++.
T Consensus 168 ggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k~lGAd~vvdy~~~~~~e~~kk~~-~~~~DvVlD~vg~~~~~~~~~~l~ 246 (347)
T KOG1198|consen 168 GGVGTAAIQLAKHAGAIKVVTACSKEKLELVKKLGADEVVDYKDENVVELIKKYT-GKGVDVVLDCVGGSTLTKSLSCLL 246 (347)
T ss_pred cHHHHHHHHHHHhcCCcEEEEEcccchHHHHHHcCCcEeecCCCHHHHHHHHhhc-CCCccEEEECCCCCccccchhhhc
Confidence 9999999999999997666666699999999999999999999999998988888 779999999999987777788888
Q ss_pred CCCEEEEEeccCCcccccchHHHH--hhc-----cEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccch
Q 020487 230 IDGRLFIIGTQGGAKTELNITSLF--AKR-----LTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPL 302 (325)
Q Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~--~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l 302 (325)
.+|+...++.............++ .+. ..+.+......... ...+.++.+.+++++|++++.+.+.||+
T Consensus 247 ~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~l~~~ie~gkikp~i~~~~p~ 322 (347)
T KOG1198|consen 247 KGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFV----PSAEYLKALVELIEKGKIKPVIDSVYPF 322 (347)
T ss_pred cCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeec----CCHHHHHHHHHHHHcCcccCCcceeeeH
Confidence 887654444333221111111111 111 11111111111111 2245566689999999999999999999
Q ss_pred hhHHHHHHHHHhCCCceeEEEeC
Q 020487 303 CEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 303 ~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++.+|++.+.++...||+++.+
T Consensus 323 ~~~~ea~~~~~~~~~~GK~vl~~ 345 (347)
T KOG1198|consen 323 SQAKEAFEKLEKSHATGKVVLEK 345 (347)
T ss_pred HHHHHHHHHHhhcCCcceEEEEe
Confidence 99999999999999999999864
No 72
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=100.00 E-value=4.7e-38 Score=279.82 Aligned_cols=308 Identities=23% Similarity=0.402 Sum_probs=259.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|||+++..++. +++++.+.|+| .++||+|++.++++|++|+..+.|.++.. .+|.++|||++|+|+++|++++.+
T Consensus 1 m~a~~~~~~~~---~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~ 76 (345)
T cd08286 1 MKALVYHGPGK---ISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTV-TPGRILGHEGVGVVEEVGSAVTNF 76 (345)
T ss_pred CceEEEecCCc---eeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCC-CCCceecccceEEEEEeccCcccc
Confidence 89999987664 88999999986 89999999999999999999998876543 236789999999999999999999
Q ss_pred CCCCEEEEEc----------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHHHHH
Q 020487 80 KVGDQVCALL----------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACTVWS 129 (325)
Q Consensus 80 ~~Gd~V~~~~----------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~a~~ 129 (325)
++||+|+... .+|+|++|+.++.+ .++++|++++..+++.++..+++||.
T Consensus 77 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~ 156 (345)
T cd08286 77 KVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYE 156 (345)
T ss_pred CCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHH
Confidence 9999998742 13889999999987 89999999999999999999999999
Q ss_pred HHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCc
Q 020487 130 TVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKG 208 (325)
Q Consensus 130 ~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (325)
++....+++++++++|.|+ |.+|.+++|+++..| .+|++++.++++...++++|++.+++.....+...+.+.+++++
T Consensus 157 ~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~ 235 (345)
T cd08286 157 CGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRG 235 (345)
T ss_pred HHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCC
Confidence 8777788999999999886 999999999999999 69999888888888889999999998877777777888888778
Q ss_pred ccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487 209 VDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 287 (325)
Q Consensus 209 ~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
+|+++||+|. ..+..+++.++++|+++.+|.... ...++...++.+++++.+..... +.++.+.+++
T Consensus 236 ~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 303 (345)
T cd08286 236 VDVVIEAVGIPATFELCQELVAPGGHIANVGVHGK-PVDLHLEKLWIKNITITTGLVDT-----------NTTPMLLKLV 303 (345)
T ss_pred CCEEEECCCCHHHHHHHHHhccCCcEEEEecccCC-CCCcCHHHHhhcCcEEEeecCch-----------hhHHHHHHHH
Confidence 9999999985 456788899999999999986543 34455666677888887753221 2244477888
Q ss_pred HCCcccc--ccccccchhhHHHHHHHHHhCC--CceeEEEeC
Q 020487 288 AVGKVKP--VIYKYLPLCEAAEAHQLMESSQ--HIGKIMLVP 325 (325)
Q Consensus 288 ~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~--~~gkvvi~~ 325 (325)
.++.+.+ ++.++|++++++++++.+.... ...|++|.|
T Consensus 304 ~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 304 SSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred HcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 8998765 3578999999999999998753 345898876
No 73
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=100.00 E-value=4.2e-38 Score=279.26 Aligned_cols=305 Identities=32% Similarity=0.493 Sum_probs=257.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||++++.++ .+++.+.+.|++.++||+|++.++++|+.|+....+..+.. .+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~ 76 (337)
T cd08261 1 MKALVCEKPG---RLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFA-SYPRILGHELSGEVVEVGEGVAGLK 76 (337)
T ss_pred CeEEEEeCCC---ceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcC-CCCcccccccEEEEEEeCCCCCCCC
Confidence 8999998765 38899999999999999999999999999999988876543 2367899999999999999999999
Q ss_pred CCCEEEE---------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|++ +...|+|++|+.++++ ++++|+++++++++++ ..+++++.++ .
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~ 153 (337)
T cd08261 77 VGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-R 153 (337)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-H
Confidence 9999987 3235899999999999 9999999999999876 6778888887 7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
..++.+++++||+|+ |.+|.+++++|+.+|++|+++++++++.+.++++|++++++.....+.+.+.+.++++++|+++
T Consensus 154 ~~~l~~g~~vLI~g~-g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vl 232 (337)
T cd08261 154 RAGVTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVI 232 (337)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEE
Confidence 788999999999975 8999999999999999999999999999999999999999888777788888888877899999
Q ss_pred eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292 (325)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 292 (325)
||+|+ ..+..++++|+++|+++.+|.... ....+...+..+++++.+... . ..+.++.+.+++.+|.+
T Consensus 233 d~~g~~~~~~~~~~~l~~~G~~i~~g~~~~-~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~~l~~~~~i 301 (337)
T cd08261 233 DATGNPASMEEAVELVAHGGRVVLVGLSKG-PVTFPDPEFHKKELTILGSRN---A-------TREDFPDVIDLLESGKV 301 (337)
T ss_pred ECCCCHHHHHHHHHHHhcCCEEEEEcCCCC-CCccCHHHHHhCCCEEEEecc---C-------ChhhHHHHHHHHHcCCC
Confidence 99976 567888999999999999886542 233444455556777666421 1 12345558889999998
Q ss_pred cc--ccccccchhhHHHHHHHHHhC-CCceeEEEe
Q 020487 293 KP--VIYKYLPLCEAAEAHQLMESS-QHIGKIMLV 324 (325)
Q Consensus 293 ~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvi~ 324 (325)
++ .+...+++++++++++.+.++ ...+|+|++
T Consensus 302 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~ 336 (337)
T cd08261 302 DPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE 336 (337)
T ss_pred ChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence 87 677899999999999999988 477899886
No 74
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=100.00 E-value=1.9e-38 Score=281.18 Aligned_cols=305 Identities=32% Similarity=0.468 Sum_probs=256.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++++ +++++.|.|.+.++|++|++.++++|++|++...|.++.. .+|.++|||++|+|+++|++++.++
T Consensus 1 m~a~~~~~~~~~--~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~g~~~~~~~ 77 (334)
T PRK13771 1 MKAVILPGFKQG--YRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRM-KYPVILGHEVVGTVEEVGENVKGFK 77 (334)
T ss_pred CeeEEEcCCCCC--cEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCC-CCCeeccccceEEEEEeCCCCccCC
Confidence 899999988764 8899999999999999999999999999999888866532 3367899999999999999998899
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+.+.+.++|.++..
T Consensus 78 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~ 157 (334)
T PRK13771 78 PGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRR 157 (334)
T ss_pred CCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHh
Confidence 999999863 15889999999999999999999999999999999999999855
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
. .++++++++|+|++|.+|++++++++..|++++++++++++.+.++++ ++.+++.. .+.+.+.+. + ++|+++
T Consensus 158 ~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~v~~~-~--~~d~~l 230 (334)
T PRK13771 158 A-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVSKY-ADYVIVGS--KFSEEVKKI-G--GADIVI 230 (334)
T ss_pred c-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHH-HHHhcCch--hHHHHHHhc-C--CCcEEE
Confidence 5 889999999999999999999999999999999999999999888887 66666554 444555543 3 699999
Q ss_pred eCCChHHHHHhhccccCCCEEEEEeccCCccc-ccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKT-ELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292 (325)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 292 (325)
||+|+......+++++++|+++.+|....... .......+.+++++.+.... ..+.++.+++++.++.+
T Consensus 231 d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l 300 (334)
T PRK13771 231 ETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISA----------TKRDVEEALKLVAEGKI 300 (334)
T ss_pred EcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCC----------CHHHHHHHHHHHHcCCC
Confidence 99999888889999999999999997653221 23344445677888776311 12335558899999999
Q ss_pred ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++.+.+.|+++++++|++.+++++..+|+++.|
T Consensus 301 ~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 301 KPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred cceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 877889999999999999999888889999875
No 75
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=5.4e-38 Score=276.46 Aligned_cols=309 Identities=32% Similarity=0.507 Sum_probs=256.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+.+..+++.+.+.|.+.++||+||+.++++|++|+....+..+. ...|.++|||++|+|+++|+ ..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~vG~--~~~~ 77 (320)
T cd08243 1 MKAIVIEQPGGPEVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPS-VKFPRVLGIEAVGEVEEAPG--GTFT 77 (320)
T ss_pred CeEEEEcCCCCccceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCC-CCCCccccceeEEEEEEecC--CCCC
Confidence 89999988776666888888888889999999999999999999998886643 23467899999999999995 5799
Q ss_pred CCCEEEEEcC------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHH
Q 020487 81 VGDQVCALLG------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGT 154 (325)
Q Consensus 81 ~Gd~V~~~~~------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~ 154 (325)
+||+|+++.. +|+|++|+.++...++++|+++++++++.++.++.+||.++.....+++|++++|+|++|.+|+
T Consensus 78 ~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~ 157 (320)
T cd08243 78 PGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGL 157 (320)
T ss_pred CCCEEEEecCCCCCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHH
Confidence 9999998853 4899999999999999999999999999999999999999988888999999999999999999
Q ss_pred HHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEE
Q 020487 155 FAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRL 234 (325)
Q Consensus 155 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~ 234 (325)
+++++|+..|++|++++.++++.+.++++|++++++. ...+...+.+. ++++|+++||+|+..+...+++++++|++
T Consensus 158 ~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~i~~~--~~~~d~vl~~~~~~~~~~~~~~l~~~g~~ 234 (320)
T cd08243 158 AALKLAKALGATVTATTRSPERAALLKELGADEVVID-DGAIAEQLRAA--PGGFDKVLELVGTATLKDSLRHLRPGGIV 234 (320)
T ss_pred HHHHHHHHcCCEEEEEeCCHHHHHHHHhcCCcEEEec-CccHHHHHHHh--CCCceEEEECCChHHHHHHHHHhccCCEE
Confidence 9999999999999999999999999999999887754 44556666666 46899999999998888999999999999
Q ss_pred EEEeccCCccc--ccchHHHH--hhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHH
Q 020487 235 FIIGTQGGAKT--ELNITSLF--AKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQ 310 (325)
Q Consensus 235 v~~g~~~~~~~--~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~ 310 (325)
+.+|...+... ........ .+++++.+....... ...++.+.+++.++.+.+.+...|+++++++|++
T Consensus 235 v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~ 306 (320)
T cd08243 235 CMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVP--------QTPLQELFDFVAAGHLDIPPSKVFTFDEIVEAHA 306 (320)
T ss_pred EEEccCCCCcccCCcchhhhhhhccceEEEecchhhhh--------HHHHHHHHHHHHCCceecccccEEcHHHHHHHHH
Confidence 99987543211 11122222 456666665432211 2345558888999998877788999999999999
Q ss_pred HHHhCCCceeEEE
Q 020487 311 LMESSQHIGKIML 323 (325)
Q Consensus 311 ~~~~~~~~gkvvi 323 (325)
.+.++...+|+++
T Consensus 307 ~~~~~~~~~kvvv 319 (320)
T cd08243 307 YMESNRAFGKVVV 319 (320)
T ss_pred HHHhCCCCCcEEe
Confidence 9998888888875
No 76
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=100.00 E-value=6.5e-38 Score=278.35 Aligned_cols=315 Identities=40% Similarity=0.644 Sum_probs=268.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++...+.+..+++.+.+.|.+.+++|+|++.++++|++|++.+.|..+....+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (342)
T cd08266 1 MKAVVIRGHGGPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVK 80 (342)
T ss_pred CeEEEEecCCCccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCC
Confidence 89999987666667888888888889999999999999999999998887654334577899999999999999999999
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+... ..|+|++|+.++.+.++++|+++++.+++.++..+.+++.++.+
T Consensus 81 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 81 PGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 999999762 24789999999999999999999999999999999999999878
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
...+.++++++|+|+++.+|++++++++..|++|+++++++++.+.++.++.+.+++.....+.+.+.+.+.++++|+++
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 240 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVV 240 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEE
Confidence 88899999999999988999999999999999999999999988888888887778777666777777777767899999
Q ss_pred eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK 293 (325)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 293 (325)
+++|...+...+++++++|+++.+|.........+....+.+++++.+...... ..++.+.+++.++.+.
T Consensus 241 ~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~l~ 310 (342)
T cd08266 241 EHVGAATWEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTK----------AELDEALRLVFRGKLK 310 (342)
T ss_pred ECCcHHHHHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCH----------HHHHHHHHHHHcCCcc
Confidence 999998888899999999999999876543333444445667888777654321 2344478889999988
Q ss_pred cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.++..|+++++++|++.+.++...+|++++|
T Consensus 311 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 311 PVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred cceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 87889999999999999999888889999875
No 77
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=100.00 E-value=4.5e-38 Score=279.23 Aligned_cols=310 Identities=32% Similarity=0.472 Sum_probs=264.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++..++++. +.+++.+.|.+.+++|+|++.++++|++|.....|..+....+|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~ 79 (338)
T cd08254 1 MKAWRFHKGSKGL-LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFK 79 (338)
T ss_pred CeeEEEecCCCCc-eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCC
Confidence 8999999888875 788888899999999999999999999999999888764444577899999999999999999999
Q ss_pred CCCEEEE------------------Ec---------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCA------------------LL---------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~------------------~~---------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+. ++ .+|+|++|+.++.+.++++|+++++.+++.++.++.+||.++..
T Consensus 80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~ 159 (338)
T cd08254 80 VGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVR 159 (338)
T ss_pred CCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHh
Confidence 9999986 22 25899999999999999999999999999999999999999988
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
...+++++++||.|+ |.+|.+++++|+..|++|++++.++++.+.++++|.+.+++.........+ +...++++|+++
T Consensus 160 ~~~~~~~~~vli~g~-g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~~~~~D~vi 237 (338)
T cd08254 160 AGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKK-AAGLGGGFDVIF 237 (338)
T ss_pred ccCCCCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHH-HHhcCCCceEEE
Confidence 888999999999875 899999999999999999999999999999999999888877766665555 666777899999
Q ss_pred eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292 (325)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 292 (325)
||+|. ..+..++++|+++|+++.+|.... ...++...+..++..+.+..... .+.++.+.+++.++.+
T Consensus 238 d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~ll~~~~l 306 (338)
T cd08254 238 DFVGTQPTFEDAQKAVKPGGRIVVVGLGRD-KLTVDLSDLIARELRIIGSFGGT----------PEDLPEVLDLIAKGKL 306 (338)
T ss_pred ECCCCHHHHHHHHHHhhcCCEEEEECCCCC-CCccCHHHHhhCccEEEEeccCC----------HHHHHHHHHHHHcCCC
Confidence 99985 467888999999999999976442 23355566677788777754321 1234447888999998
Q ss_pred ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
.+. .+.+++++++++++.+.+++..+|+|+.|
T Consensus 307 ~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 307 DPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred ccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 866 68899999999999999999999999987
No 78
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=100.00 E-value=9.9e-39 Score=283.31 Aligned_cols=312 Identities=29% Similarity=0.393 Sum_probs=255.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++ +..+++++.+.|+|+++||+|++.++++|++|+....+..+ ..+|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~-~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~--~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (339)
T cd08249 1 QKAAVLTGPG-GGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGFI--PSYPAILGCDFAGTVVEVGSGVTRFK 77 (339)
T ss_pred CceEEeccCC-CCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeecccc--cCCCceeeeeeeEEEEEeCCCcCcCC
Confidence 8999999887 66699999999999999999999999999999987755441 12356899999999999999999999
Q ss_pred CCCEEEEEcC--------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCC----------CCCCE
Q 020487 81 VGDQVCALLG--------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL----------SPGES 142 (325)
Q Consensus 81 ~Gd~V~~~~~--------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~----------~~~~~ 142 (325)
+||+|+++.. +|+|++|+.++.+.++++|+++++++++.++..+.++|+++....++ +++++
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~ 157 (339)
T cd08249 78 VGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKP 157 (339)
T ss_pred CCCEEEEEeccccCCCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCE
Confidence 9999999864 48999999999999999999999999999999999999998666544 78999
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHH
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYF 221 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~ 221 (325)
++|+|++|.+|++++++++.+|++|+.++ +.++.+.++++|++++++.....+.+.+++.++ +++|+++|++|. ..+
T Consensus 158 vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~-~~~d~vl~~~g~~~~~ 235 (339)
T cd08249 158 VLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVKSLGADAVFDYHDPDVVEDIRAATG-GKLRYALDCISTPESA 235 (339)
T ss_pred EEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHHhcCCCEEEECCCchHHHHHHHhcC-CCeeEEEEeeccchHH
Confidence 99999999999999999999999999888 568888889999999998888788888877766 579999999997 778
Q ss_pred HHhhccccC--CCEEEEEeccCCcccccchHHHHhhccEeeecccccccc--hhHHHHHHHHHHHHHHHHHCCccccccc
Q 020487 222 QRNLGSLNI--DGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST--ENKALIVSEVEKNVWPAIAVGKVKPVIY 297 (325)
Q Consensus 222 ~~~~~~l~~--~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~~~~ 297 (325)
...++++++ +|+++.+|...... .+..+++........... ...+......++.+.+++.++.+.+...
T Consensus 236 ~~~~~~l~~~~~g~~v~~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 308 (339)
T cd08249 236 QLCAEALGRSGGGKLVSLLPVPEET-------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPV 308 (339)
T ss_pred HHHHHHHhccCCCEEEEecCCCccc-------cCCCCceEEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCc
Confidence 899999999 99999998654321 011222222222111100 0111223345566888999999887666
Q ss_pred cccc--hhhHHHHHHHHHhCC-CceeEEEe
Q 020487 298 KYLP--LCEAAEAHQLMESSQ-HIGKIMLV 324 (325)
Q Consensus 298 ~~~~--l~~~~~a~~~~~~~~-~~gkvvi~ 324 (325)
..++ ++++++|++.+.+++ ..+|+|++
T Consensus 309 ~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~ 338 (339)
T cd08249 309 RVVEGGLEGVQEGLDLLRKGKVSGEKLVVR 338 (339)
T ss_pred eecCCcHHHHHHHHHHHHCCCccceEEEEe
Confidence 7788 999999999999888 88999986
No 79
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=100.00 E-value=4.6e-38 Score=279.15 Aligned_cols=304 Identities=26% Similarity=0.412 Sum_probs=253.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++.++++.. .+++.+.|++.++||+||+.++++|++|++.+.|..+.. .|.++|||++|+|+++|++++.|+
T Consensus 1 mka~~~~~~~~~~--~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~~--~~~~~g~e~~G~V~~~G~~v~~~~ 76 (338)
T PRK09422 1 MKAAVVNKDHTGD--VVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGDK--TGRILGHEGIGIVKEVGPGVTSLK 76 (338)
T ss_pred CeEEEecCCCCCc--eEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCCC--CCccCCcccceEEEEECCCCccCC
Confidence 9999999877642 278899999999999999999999999999988876532 267899999999999999999999
Q ss_pred CCCEEEE-----------Ec-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCA-----------LL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~-----------~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+. ++ .+|+|++|+.++.+.++++|+++++.+++.++..+.+||+++
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~- 155 (338)
T PRK09422 77 VGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI- 155 (338)
T ss_pred CCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-
Confidence 9999986 22 258999999999999999999999999999999999999998
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCC-chHHHHHHHHhCCCccc
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKT-EDFVARVKEETGGKGVD 210 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~d 210 (325)
..++++++++++|+|+ |.+|++++++|+.. |++|+++++++++++.++++|++.+++.+. ..+.+.+.+..+ ++|
T Consensus 156 ~~~~~~~g~~vlV~g~-g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~--~~d 232 (338)
T PRK09422 156 KVSGIKPGQWIAIYGA-GGLGNLALQYAKNVFNAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTG--GAH 232 (338)
T ss_pred HhcCCCCCCEEEEECC-cHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcC--CCc
Confidence 7788999999999995 99999999999984 999999999999999999999998888754 556667777665 588
Q ss_pred -EEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 211 -VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 211 -~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
+++++.+...+...+++++++|+++.+|.... ...++...+..++..+.++.... .+.++.+++++.+
T Consensus 233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~ 301 (338)
T PRK09422 233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPE-SMDLSIPRLVLDGIEVVGSLVGT----------RQDLEEAFQFGAE 301 (338)
T ss_pred EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCC-CceecHHHHhhcCcEEEEecCCC----------HHHHHHHHHHHHh
Confidence 55666666778899999999999999986542 23445555556777776654321 1234458889999
Q ss_pred CccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 290 g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
|.+.+.+. .++++++++|++.+.++...||+++.
T Consensus 302 g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~ 335 (338)
T PRK09422 302 GKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVID 335 (338)
T ss_pred CCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEe
Confidence 99876654 58999999999999999988999885
No 80
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-37 Score=274.37 Aligned_cols=319 Identities=32% Similarity=0.508 Sum_probs=269.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++.++.+++++.+.|.+.+++|+|++.++++|++|+....+........|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (326)
T cd08272 1 MKALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFR 80 (326)
T ss_pred CeEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCC
Confidence 89999998888777888888888889999999999999999999988876653333467899999999999999999999
Q ss_pred CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
+||+|+++. ..|+|++|+.++...++++|+++++..++.++..+.+||+++.+..+++++++++|+|+++.+|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~ 160 (326)
T cd08272 81 VGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHV 160 (326)
T ss_pred CCCEEEEccCCcCCCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHH
Confidence 999999986 258899999999999999999999999999999999999998788899999999999988999999
Q ss_pred HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (325)
++++++..|++|+.++++ ++.+.++++|.+.+++.... +.+.+.+.++++++|++++|.++......++++.++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 238 (326)
T cd08272 161 AVQLAKAAGARVYATASS-EKAAFARSLGADPIIYYRET-VVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVV 238 (326)
T ss_pred HHHHHHHcCCEEEEEech-HHHHHHHHcCCCEEEecchh-HHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEE
Confidence 999999999999999987 88888888999888877666 7778888888778999999999988888899999999999
Q ss_pred EEeccCCcccccchHHHHhhccEeeecccccc-cchhHHHHHHHHHHHHHHHHHCCccccccc-cccchhhHHHHHHHHH
Q 020487 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSR-STENKALIVSEVEKNVWPAIAVGKVKPVIY-KYLPLCEAAEAHQLME 313 (325)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~-~~~~l~~~~~a~~~~~ 313 (325)
.+|... ..+......+++++.+..+... .....+......++.+.+++.++.+++.++ +.|++++++++++.+.
T Consensus 239 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~ 314 (326)
T cd08272 239 SILGGA----THDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLE 314 (326)
T ss_pred EEecCC----ccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCcccccccceecHHHHHHHHHHHH
Confidence 998653 1222233357787777654321 111222334556677888999999887765 8999999999999998
Q ss_pred hCCCceeEEEeC
Q 020487 314 SSQHIGKIMLVP 325 (325)
Q Consensus 314 ~~~~~gkvvi~~ 325 (325)
+++..+|++++.
T Consensus 315 ~~~~~~~vv~~~ 326 (326)
T cd08272 315 SGSARGKIVIDV 326 (326)
T ss_pred cCCcccEEEEEC
Confidence 888888998863
No 81
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=100.00 E-value=8.6e-38 Score=280.17 Aligned_cols=310 Identities=26% Similarity=0.342 Sum_probs=248.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++..+++. +++++.|.|+|.++||+||+.++++|++|++.+.|..+. .+|.++|||++|+|+++|+++..++
T Consensus 8 ~~a~~~~~~~~~--~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~~--~~p~v~G~e~~G~V~~vG~~v~~~~ 83 (373)
T cd08299 8 CKAAVLWEPKKP--FSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLVT--PFPVILGHEAAGIVESVGEGVTTVK 83 (373)
T ss_pred eEEEEEecCCCC--cEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCCC--CCCccccccceEEEEEeCCCCccCC
Confidence 688888876654 889999999999999999999999999999999887632 3578999999999999999999999
Q ss_pred CCCEEEEEc------------------------------------------------CCceeeeEEeecCCceeeCCCCC
Q 020487 81 VGDQVCALL------------------------------------------------GGGGYAEKVAVPAGQVLPVPSGV 112 (325)
Q Consensus 81 ~Gd~V~~~~------------------------------------------------~~g~~~~~~~~~~~~~~~~p~~~ 112 (325)
+||+|+.+. ..|+|++|++++.+.++++|+++
T Consensus 84 ~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l 163 (373)
T cd08299 84 PGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAA 163 (373)
T ss_pred CCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCC
Confidence 999998751 24789999999999999999999
Q ss_pred CHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeC
Q 020487 113 SLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINY 191 (325)
Q Consensus 113 ~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
++++++.+.+++.++|.++....+++++++++|+|+ |.+|++++++++..|+ +|+++++++++++.++++|++++++.
T Consensus 164 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~ 242 (373)
T cd08299 164 PLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINP 242 (373)
T ss_pred ChHHhheeccchHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecc
Confidence 999999999999999998878889999999999976 9999999999999999 89999999999999999999988876
Q ss_pred CCch--HHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcc-ccCCCEEEEEeccCCc-ccccchHHHHhhccEeeeccccc
Q 020487 192 KTED--FVARVKEETGGKGVDVILDCMGA-SYFQRNLGS-LNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRS 266 (325)
Q Consensus 192 ~~~~--~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~-l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~ 266 (325)
.... +...+.+.++ +++|+++||+|. ..+..++.. +.++|+++.+|..... ..+++.. .+.++.++.++....
T Consensus 243 ~~~~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~ 320 (373)
T cd08299 243 QDYKKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGG 320 (373)
T ss_pred cccchhHHHHHHHHhC-CCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecC
Confidence 6433 5666666666 479999999996 445555554 4679999999876432 2223332 234677888776554
Q ss_pred ccchhHHHHHHHHHHHHHHHHHCCc--cccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 267 RSTENKALIVSEVEKNVWPAIAVGK--VKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~g~--l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
..... .+.++++.+.++. +++.+.+.|+++++++|++.+.+++. .|+++.+
T Consensus 321 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 321 WKSKD-------SVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred CccHH-------HHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 32211 1112445555554 44567899999999999999887665 4777653
No 82
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=100.00 E-value=1.1e-37 Score=277.44 Aligned_cols=306 Identities=29% Similarity=0.445 Sum_probs=255.4
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|||+++..++ .+++++.+.|.|. ++||+|++.++++|++|+....|.++. .+|.++|+|++|+|+++|++++.+
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (344)
T cd08284 1 MKAVVFKGPG---DVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIPS--TPGFVLGHEFVGEVVEVGPEVRTL 75 (344)
T ss_pred CeeEEEecCC---CceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCCC--CCCcccccceEEEEEeeCCCcccc
Confidence 8999998654 3899999999985 999999999999999999988887652 236789999999999999999999
Q ss_pred CCCCEEEEEc-------------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhccCcchHHH
Q 020487 80 KVGDQVCALL-------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 80 ~~Gd~V~~~~-------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~l~~~~~~ 126 (325)
++||+|++.. .+|+|++|+.++++ .++++|++++++++++++..+++
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~t 155 (344)
T cd08284 76 KVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPT 155 (344)
T ss_pred CCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHH
Confidence 9999999753 14889999999875 99999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (325)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (325)
||+++. ...+.++++|+|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|+. .++.+...+...+.+.++
T Consensus 156 a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~l~~~~~ 232 (344)
T cd08284 156 GYFGAK-RAQVRPGDTVAVIGC-GPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFEDAEPVERVREATE 232 (344)
T ss_pred HHhhhH-hcCCccCCEEEEECC-cHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCCcCHHHHHHHHhC
Confidence 999984 478899999999975 9999999999999997 899998888888888899975 456666667778888887
Q ss_pred CCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHH
Q 020487 206 GKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVW 284 (325)
Q Consensus 206 ~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (325)
++++|++|||++. ..+...+++++++|+++.+|..............+.+++++.+... . ..+.++.++
T Consensus 233 ~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~-------~~~~~~~~~ 302 (344)
T cd08284 233 GRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRC---P-------VRSLFPELL 302 (344)
T ss_pred CCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecC---C-------cchhHHHHH
Confidence 7789999999995 4678889999999999999876543334445555667887765311 0 123455588
Q ss_pred HHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 285 PAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 285 ~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+++.++.+.+ ++.+++++++++++++.+.+++. +|+|++|
T Consensus 303 ~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~~ 344 (344)
T cd08284 303 PLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLDP 344 (344)
T ss_pred HHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEecC
Confidence 8999998875 46788999999999999988777 9999876
No 83
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=2.7e-37 Score=272.69 Aligned_cols=323 Identities=35% Similarity=0.529 Sum_probs=273.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++...+.++.+++++.+.|.+.+++++|++.++++|+.|+....+..+....+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~ 80 (328)
T cd08268 1 MRAVRFHQFGGPEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFA 80 (328)
T ss_pred CeEEEEeccCCcceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCC
Confidence 89999998777777888888888889999999999999999999988776654334467899999999999999999999
Q ss_pred CCCEEEEEc-----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 81 VGDQVCALL-----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 81 ~Gd~V~~~~-----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
+||+|+++. .+|++++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++++|+|+++.+|++
T Consensus 81 ~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~ 160 (328)
T cd08268 81 VGDRVSVIPAADLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLA 160 (328)
T ss_pred CCCEEEeccccccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHH
Confidence 999999885 348899999999999999999999999999999999999998788889999999999999999999
Q ss_pred HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (325)
++++++..|++++.++++.++.+.++++|.+.+++.+.......+.+.+.++++|++++|.++......+++++++|+++
T Consensus 161 ~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v 240 (328)
T cd08268 161 AIQIANAAGATVIATTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLV 240 (328)
T ss_pred HHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEE
Confidence 99999999999999999998888888888888888777677777777777778999999999988888899999999999
Q ss_pred EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 315 (325)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~ 315 (325)
.+|.........+....+.+++++.+..+.... ..+......++.+.+++.++.+.+.....|++++++++++.+.++
T Consensus 241 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (328)
T cd08268 241 VYGALSGEPTPFPLKAALKKSLTFRGYSLDEIT--LDPEARRRAIAFILDGLASGALKPVVDRVFPFDDIVEAHRYLESG 318 (328)
T ss_pred EEEeCCCCCCCCchHHHhhcCCEEEEEeccccc--CCHHHHHHHHHHHHHHHHCCCCcCCcccEEcHHHHHHHHHHHHcC
Confidence 998655432234444346788888776554322 122344556666778888888887778889999999999999988
Q ss_pred CCceeEEEeC
Q 020487 316 QHIGKIMLVP 325 (325)
Q Consensus 316 ~~~gkvvi~~ 325 (325)
+..+|++++|
T Consensus 319 ~~~~~vv~~~ 328 (328)
T cd08268 319 QQIGKIVVTP 328 (328)
T ss_pred CCCceEEEeC
Confidence 8888999875
No 84
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=100.00 E-value=1e-37 Score=276.73 Aligned_cols=318 Identities=31% Similarity=0.404 Sum_probs=262.9
Q ss_pred CEEEEEcCCCCCc---ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC
Q 020487 1 MKAIVITQPGSPE---VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS 77 (325)
Q Consensus 1 m~a~~~~~~~~~~---~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~ 77 (325)
|||+++..++++. .++.++.+.|++.++||+|++.++++|++|+....+..+. ..+|.++|||++|+|+.+|+++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~-~~~~~~~g~e~~G~v~~~G~~v~ 79 (336)
T cd08252 1 MKAIGFTQPLPITDPDSLIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPV-PGQPKILGWDASGVVEAVGSEVT 79 (336)
T ss_pred CceEEecCCCCCCcccceeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCC-CCCCcccccceEEEEEEcCCCCC
Confidence 8999999988765 4777888888899999999999999999999988776652 23466899999999999999999
Q ss_pred CCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC-----CCEEEEEcCC
Q 020487 78 RWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-----GESFLVHGGS 149 (325)
Q Consensus 78 ~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-----~~~vli~g~~ 149 (325)
.|++||+|+.+. .+|+|++|+.++.+.++++|+++++++++.++..+.++|.++.+...+++ +++++|+|++
T Consensus 80 ~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~ 159 (336)
T cd08252 80 LFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGA 159 (336)
T ss_pred CCCCCCEEEEcCCCCCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCC
Confidence 999999999874 46899999999999999999999999999999999999999877788887 9999999988
Q ss_pred chHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcc
Q 020487 150 SGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGS 227 (325)
Q Consensus 150 g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~ 227 (325)
|.+|++++++++.+| ++|++++.++++.+.++++|++++++... .+...+.. .+++++|+++||+|. ..+..++++
T Consensus 160 g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~i~~-~~~~~~d~vl~~~~~~~~~~~~~~~ 237 (336)
T cd08252 160 GGVGSIAIQLAKQLTGLTVIATASRPESIAWVKELGADHVINHHQ-DLAEQLEA-LGIEPVDYIFCLTDTDQHWDAMAEL 237 (336)
T ss_pred chHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHhcCCcEEEeCCc-cHHHHHHh-hCCCCCCEEEEccCcHHHHHHHHHH
Confidence 999999999999999 89999999999999999999988887764 45555553 344689999999995 567888999
Q ss_pred ccCCCEEEEEeccCCcccccchHHHHhhccEeeeccccccc--chhHHHHHHHHHHHHHHHHHCCcccccc---ccccch
Q 020487 228 LNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRS--TENKALIVSEVEKNVWPAIAVGKVKPVI---YKYLPL 302 (325)
Q Consensus 228 l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~~~---~~~~~l 302 (325)
++++|+++.+|... ..++...+..+++++.+..+.... ...........++.+.+++.+|.+.+.+ ...+++
T Consensus 238 l~~~g~~v~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (336)
T cd08252 238 IAPQGHICLIVDPQ---EPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINA 314 (336)
T ss_pred hcCCCEEEEecCCC---CcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCH
Confidence 99999999998542 234445555678888776543211 1111123345667788999999988653 245899
Q ss_pred hhHHHHHHHHHhCCCceeEEEe
Q 020487 303 CEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 303 ~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+++++|++.+.+++..+|+++.
T Consensus 315 ~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 315 ENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred HHHHHHHHHHHcCCccceEEeC
Confidence 9999999999999888998863
No 85
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=100.00 E-value=1.3e-37 Score=276.79 Aligned_cols=306 Identities=31% Similarity=0.456 Sum_probs=256.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++++++. +.+++.+.|++.+++|+|++.++++|++|+..+.+.++ ...+|.++|+|++|+|+++|++++.++
T Consensus 1 ~~~~~~~~~~~---~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~-~~~~~~~~g~~~~G~V~~~G~~v~~~~ 76 (343)
T cd08235 1 MKAAVLHGPND---VRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHT-DLKPPRILGHEIAGEIVEVGDGVTGFK 76 (343)
T ss_pred CeEEEEecCCc---eEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCc-cCCCCcccccceEEEEEeeCCCCCCCC
Confidence 89999987764 88899999999999999999999999999999888764 223467899999999999999999999
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCc-----eeeCCCCCCHHhhccCcchHHHHH
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQ-----VLPVPSGVSLKDAAAFPEVACTVW 128 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~l~~~~~~a~ 128 (325)
+||+|+++. ..|+|++|+.++.+. ++++|+++++.+++.+ .+..+|+
T Consensus 77 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~~a~ 155 (343)
T cd08235 77 VGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLACCI 155 (343)
T ss_pred CCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHHHHH
Confidence 999999862 358999999999998 9999999999998766 7889999
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCC
Q 020487 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGK 207 (325)
Q Consensus 129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 207 (325)
+++. ..++++|++|+|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|.+++++++...+.+.+.+.++++
T Consensus 156 ~~l~-~~~~~~g~~VlV~g~-g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~ 233 (343)
T cd08235 156 NAQR-KAGIKPGDTVLVIGA-GPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGR 233 (343)
T ss_pred HHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCc
Confidence 9984 458999999999975 99999999999999998 98898899998888889999999888888888888888878
Q ss_pred cccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487 208 GVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 285 (325)
Q Consensus 208 ~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
++|+++||++.. .+...+++++++|+++.+|..... ...++......+++.+.+...... +.++.+++
T Consensus 234 ~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~ 303 (343)
T cd08235 234 GADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASP----------EDYKEALE 303 (343)
T ss_pred CCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCCh----------hhHHHHHH
Confidence 899999999964 678889999999999999865432 233444455556777766432211 23444788
Q ss_pred HHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 286 AIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 286 ~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
++.++.+++ .+..+|++++++++++.+.+++ .+|+|+.
T Consensus 304 l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 304 LIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred HHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 999998863 4578899999999999999988 8899873
No 86
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=100.00 E-value=1e-37 Score=278.10 Aligned_cols=305 Identities=27% Similarity=0.389 Sum_probs=251.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--------CCCCCCCCCCCceeEEEEEe
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--------PPKGASPYPGLECSGTILSV 72 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--------~~~~~p~~~G~e~~G~V~~v 72 (325)
|||+++.+++. +++++.+.|++.++||+||+.++++|++|++.+.|... ....+|.++|||++|+|+++
T Consensus 1 mka~~~~~~~~---~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~v 77 (350)
T cd08256 1 MRAVVCHGPQD---YRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVEL 77 (350)
T ss_pred CeeEEEecCCc---eEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEe
Confidence 89999987654 88999999999999999999999999999998887531 11134678999999999999
Q ss_pred cCCCC--CCCCCCEEEE---------------------------Ec--CCceeeeEEeecCC-ceeeCCCCCCHHhhccC
Q 020487 73 GKNVS--RWKVGDQVCA---------------------------LL--GGGGYAEKVAVPAG-QVLPVPSGVSLKDAAAF 120 (325)
Q Consensus 73 G~~~~--~~~~Gd~V~~---------------------------~~--~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~l 120 (325)
|+.++ +|++||+|+. +. ..|+|++|+.++++ .++++|+++++++++.+
T Consensus 78 G~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~ 157 (350)
T cd08256 78 GEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI 157 (350)
T ss_pred CCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh
Confidence 99998 8999999987 31 35899999999988 57899999999999888
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (325)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (325)
.++.++|.++ +..+++++++++|.|+ |.+|.+++++|+.+|++ ++++++++++...++++|++.+++.....+.+.
T Consensus 158 -~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~ 234 (350)
T cd08256 158 -EPLACALHAV-DRANIKFDDVVVLAGA-GPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEK 234 (350)
T ss_pred -hHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHH
Confidence 8889999998 7788999999999554 99999999999999985 677778888888888999998988877777888
Q ss_pred HHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHH-HhhccEeeecccccccchhHHHHHH
Q 020487 200 VKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSL-FAKRLTVQAAGLRSRSTENKALIVS 277 (325)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~ 277 (325)
+.+.+++.++|+++||+|. ..+..++++++++|+++.+|.... ...++...+ ..+++++.++.....
T Consensus 235 ~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~---------- 303 (350)
T cd08256 235 IKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGD-PVTVDWSIIGDRKELDVLGSHLGPY---------- 303 (350)
T ss_pred HHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCC-CCccChhHhhcccccEEEEeccCch----------
Confidence 8888887889999999995 467788999999999999986543 222333333 245677776543321
Q ss_pred HHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 278 EVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 278 ~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
.++++.+++.+|.+.+ .+.+.|+++++++|++.+++++..+|+++
T Consensus 304 -~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 304 -CYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred -hHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 2344788899999876 36899999999999999999888888874
No 87
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=100.00 E-value=1.1e-37 Score=276.01 Aligned_cols=305 Identities=34% Similarity=0.481 Sum_probs=255.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+++ .+.+++.|.|.+.++||+|++.++++|++|++...|..+.. ..|.++|+|++|+|+.+|++++.++
T Consensus 1 m~a~~~~~~~~--~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~-~~~~~~g~e~~G~v~~~G~~v~~~~ 77 (332)
T cd08259 1 MKAAILHKPNK--PLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRG-KYPLILGHEIVGTVEEVGEGVERFK 77 (332)
T ss_pred CeEEEEecCCC--ceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCC-CCCeeccccceEEEEEECCCCccCC
Confidence 89999987433 48889999999999999999999999999999998876542 3467899999999999999999999
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+++. ..|+|++|+.++...++++|+++++++++.++.++.+||+++..
T Consensus 78 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 78 PGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 999999874 15899999999999999999999999999999999999999866
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
..++++++++|+|++|.+|++++++++..|++|+++++++++.+.+++++.+.+++... +.+.+.+.. ++|+++
T Consensus 158 -~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~---~~d~v~ 231 (332)
T cd08259 158 -AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILKELGADYVIDGSK--FSEDVKKLG---GADVVI 231 (332)
T ss_pred -hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCcEEEecHH--HHHHHHhcc---CCCEEE
Confidence 88999999999999999999999999999999999999988888888888877775443 444554433 699999
Q ss_pred eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK 293 (325)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 293 (325)
+|+|......++++++++|+++.+|................+++.+.+.... ..+.++.+.+++.+|.+.
T Consensus 232 ~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~ 301 (332)
T cd08259 232 ELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISA----------TKADVEEALKLVKEGKIK 301 (332)
T ss_pred ECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCC----------CHHHHHHHHHHHHcCCCc
Confidence 9999988888899999999999998755432223333344466666654211 123345588889999998
Q ss_pred cccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
+.+.++|+++++++|++.+.+++..+|++++
T Consensus 302 ~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 302 PVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred cceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 8788999999999999999998888998874
No 88
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=100.00 E-value=2.8e-37 Score=272.58 Aligned_cols=315 Identities=20% Similarity=0.301 Sum_probs=257.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+|+++.+++++.+.|+|.++||+|++.++++|++|+....|..+....+|.++|||++|+|++ ++++.++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~ 78 (324)
T cd08288 1 FKALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFK 78 (324)
T ss_pred CeeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCC
Confidence 99999999887777999999999999999999999999999999988887643334577889999999998 7777899
Q ss_pred CCCEEEEEc------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH--hhcCCC-CCCEEEEEcCCch
Q 020487 81 VGDQVCALL------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF--MTSHLS-PGESFLVHGGSSG 151 (325)
Q Consensus 81 ~Gd~V~~~~------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~--~~~~~~-~~~~vli~g~~g~ 151 (325)
+||+|+.+. ..|+|++|+.++.+.++++|+++++++++.++..+++++.++. ...... ++++++|+|++|.
T Consensus 79 ~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~ 158 (324)
T cd08288 79 PGDRVVLTGWGVGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGG 158 (324)
T ss_pred CCCEEEECCccCCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcH
Confidence 999999864 2589999999999999999999999999999999999987763 123445 5789999999999
Q ss_pred HHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCC
Q 020487 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNID 231 (325)
Q Consensus 152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~ 231 (325)
+|.+++++|+.+|++|++++.++++.+.++++|++++++...... .+.....+ ++|.++|++++..+...+..++.+
T Consensus 159 vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~~ 235 (324)
T cd08288 159 VGSVAVALLARLGYEVVASTGRPEEADYLRSLGASEIIDRAELSE--PGRPLQKE-RWAGAVDTVGGHTLANVLAQTRYG 235 (324)
T ss_pred HHHHHHHHHHHCCCeEEEEeCCHHHHHHHHhcCCCEEEEcchhhH--hhhhhccC-cccEEEECCcHHHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999888765332 34444433 589999999987677778889999
Q ss_pred CEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHH
Q 020487 232 GRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQL 311 (325)
Q Consensus 232 g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~ 311 (325)
|+++.+|.........+...++.+++++.+........ ....+.++.+.+++.++.+.+ +.+.++++++++|++.
T Consensus 236 g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-i~~~~~~~~~~~a~~~ 310 (324)
T cd08288 236 GAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPI----ERRRAAWARLARDLDPALLEA-LTREIPLADVPDAAEA 310 (324)
T ss_pred CEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccc----hhhHHHHHHHHHHHhcCCccc-cceeecHHHHHHHHHH
Confidence 99999987643222344455556888888875432221 123445566778888888865 4689999999999999
Q ss_pred HHhCCCceeEEEeC
Q 020487 312 MESSQHIGKIMLVP 325 (325)
Q Consensus 312 ~~~~~~~gkvvi~~ 325 (325)
+++++..+|+++++
T Consensus 311 ~~~~~~~~~vvv~~ 324 (324)
T cd08288 311 ILAGQVRGRVVVDV 324 (324)
T ss_pred HhcCCccCeEEEeC
Confidence 99999999999864
No 89
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=100.00 E-value=7.2e-38 Score=277.62 Aligned_cols=301 Identities=25% Similarity=0.350 Sum_probs=252.8
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
|+++...++ +.+++++.+.|+|.++||+||+.++++|++|++.+.|.... ..+|.++|||++|+|+++|++++.|++
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~ 77 (337)
T cd05283 1 KGYAARDAS--GKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGP-TKYPLVPGHEIVGIVVAVGSKVTKFKV 77 (337)
T ss_pred CceEEecCC--CCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCC-CCCCcccCcceeeEEEEECCCCcccCC
Confidence 467777766 44999999999999999999999999999999999887643 335789999999999999999999999
Q ss_pred CCEEEEE-----------------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHH
Q 020487 82 GDQVCAL-----------------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACT 126 (325)
Q Consensus 82 Gd~V~~~-----------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~ 126 (325)
||+|+.. ...|+|++|+.++.+.++++|+++++++++.+.+.+.+
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~t 157 (337)
T cd05283 78 GDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGIT 157 (337)
T ss_pred CCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHH
Confidence 9999731 23588999999999999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 127 VWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 127 a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
||.++.. ..++++++++|.|+ |.+|++++++++..|++|+++++++++.+.++++|++.+++.....+.. .. +
T Consensus 158 a~~~~~~-~~~~~g~~vlV~g~-g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~----~~-~ 230 (337)
T cd05283 158 VYSPLKR-NGVGPGKRVGVVGI-GGLGHLAVKFAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMK----KA-A 230 (337)
T ss_pred HHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhh----hc-c
Confidence 9999844 46899999999875 9999999999999999999999999999999999998888766543322 12 3
Q ss_pred CcccEEEeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHH
Q 020487 207 KGVDVILDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWP 285 (325)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (325)
+++|++++|+|... +..++++++++|+++.+|...... .++...++.+++++.+...... +.++.+++
T Consensus 231 ~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~ 299 (337)
T cd05283 231 GSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEPL-PVPPFPLIFGRKSVAGSLIGGR----------KETQEMLD 299 (337)
T ss_pred CCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCCC-ccCHHHHhcCceEEEEecccCH----------HHHHHHHH
Confidence 57999999999874 788899999999999998765432 4566666778999988765421 23444778
Q ss_pred HHHCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 286 AIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 286 ~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
++.+|++.+.+ +.|+++++++|++.+++++..||+|++
T Consensus 300 ~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 300 FAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred HHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 88899987765 789999999999999999999998874
No 90
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=100.00 E-value=1.7e-37 Score=277.83 Aligned_cols=307 Identities=25% Similarity=0.367 Sum_probs=254.6
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||+++.+.+.+ +++++.+.|++.++||+|++.++++|++|++.+.+..+. .+|.++|||++|+|+++|++++.+++
T Consensus 2 ~a~~~~~~~~~--~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~~--~~~~i~g~e~~G~V~~vG~~v~~~~~ 77 (365)
T cd05279 2 KAAVLWEKGKP--LSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLPT--PLPVILGHEGAGIVESIGPGVTTLKP 77 (365)
T ss_pred ceeEEecCCCC--cEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCCC--CCCcccccceeEEEEEeCCCcccCCC
Confidence 67888876654 889999999999999999999999999999998887653 34678999999999999999999999
Q ss_pred CCEEEEEcC------------------------------------------------CceeeeEEeecCCceeeCCCCCC
Q 020487 82 GDQVCALLG------------------------------------------------GGGYAEKVAVPAGQVLPVPSGVS 113 (325)
Q Consensus 82 Gd~V~~~~~------------------------------------------------~g~~~~~~~~~~~~~~~~p~~~~ 113 (325)
||+|+.... .|+|++|+.++++.++++|++++
T Consensus 78 Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~ 157 (365)
T cd05279 78 GDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAP 157 (365)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCC
Confidence 999987621 26899999999999999999999
Q ss_pred HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC
Q 020487 114 LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK 192 (325)
Q Consensus 114 ~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~ 192 (325)
+++++.+..++.++|.++.+.+++++|++++|+|+ |.+|++++++|+..|++ |+++++++++.+.++++|++++++..
T Consensus 158 ~~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~-g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~ 236 (365)
T cd05279 158 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGL-GGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPR 236 (365)
T ss_pred HHHhhHhccchhHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccc
Confidence 99999999999999999888889999999999975 99999999999999995 67777799999999999999888776
Q ss_pred Cc--hHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhcccc-CCCEEEEEeccC-CcccccchHHHHhhccEeeecccccc
Q 020487 193 TE--DFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLN-IDGRLFIIGTQG-GAKTELNITSLFAKRLTVQAAGLRSR 267 (325)
Q Consensus 193 ~~--~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~-~~g~~v~~g~~~-~~~~~~~~~~~~~~~~~i~~~~~~~~ 267 (325)
.. .+.+.+.+.++ +++|+++|++|. ..+..++++++ ++|+++.+|... .....++...+ .++.++.|......
T Consensus 237 ~~~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~ 314 (365)
T cd05279 237 DQDKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGW 314 (365)
T ss_pred cccchHHHHHHHHhC-CCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCC
Confidence 65 66677777775 689999999985 56788899999 999999998753 22344555565 56777777655433
Q ss_pred cchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 268 STENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
.. .+.++.+++++.++.+.+ ++.++|+++++++|++.+++++.. |+++
T Consensus 315 ~~-------~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 315 KS-------KDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred ch-------HhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 22 123444788889998765 468999999999999999876654 6554
No 91
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=100.00 E-value=3.9e-37 Score=273.77 Aligned_cols=309 Identities=32% Similarity=0.486 Sum_probs=256.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||++++..+. +.+++.+.|+++++||+|++.++++|++|+....+..+. ..|.++|+|++|+|+++|+++..|+
T Consensus 1 ~~a~~~~~~~~---l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~~--~~~~~~g~~~~G~V~~~g~~v~~~~ 75 (343)
T cd08236 1 MKALVLTGPGD---LRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGAY--HPPLVLGHEFSGTVEEVGSGVDDLA 75 (343)
T ss_pred CeeEEEecCCc---eeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCCC--CCCcccCcceEEEEEEECCCCCcCC
Confidence 89999998753 888999999999999999999999999999988776522 2367899999999999999999999
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+++. ..|+|++|+.++.+.++++|+++++++++++ ..+.+||.++.
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~- 153 (343)
T cd08236 76 VGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVR- 153 (343)
T ss_pred CCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHH-
Confidence 999999862 3589999999999999999999999999877 67789999984
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
...++++++++|+|+ |.+|.+++++|+.+|++ |+++++++++.+.++++|++.+++.+... .+.+....+++++|++
T Consensus 154 ~~~~~~~~~vlI~g~-g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~-~~~~~~~~~~~~~d~v 231 (343)
T cd08236 154 LAGITLGDTVVVIGA-GTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKEED-VEKVRELTEGRGADLV 231 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcccc-HHHHHHHhCCCCCCEE
Confidence 778999999999975 99999999999999997 99999899888888889998888877766 7777778887789999
Q ss_pred EeCCCh-HHHHHhhccccCCCEEEEEeccCCcc--cccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
+||.|. ..+..++++|+++|+++.+|...... ...+...++.+++++.++....... ...+.++.+.+++.+
T Consensus 232 ld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 306 (343)
T cd08236 232 IEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAP-----FPGDEWRTALDLLAS 306 (343)
T ss_pred EECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccc-----cchhhHHHHHHHHHc
Confidence 999976 45688899999999999998654321 1223444567788888876533211 123345557888999
Q ss_pred Cccc--cccccccchhhHHHHHHHHHh-CCCceeEEE
Q 020487 290 GKVK--PVIYKYLPLCEAAEAHQLMES-SQHIGKIML 323 (325)
Q Consensus 290 g~l~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvi 323 (325)
+.+. +.+...+++++++++++.+.+ ....+|+|+
T Consensus 307 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 307 GKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred CCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 9875 446789999999999999998 666788774
No 92
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=100.00 E-value=3.4e-37 Score=276.85 Aligned_cols=305 Identities=26% Similarity=0.419 Sum_probs=250.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
||++++..++ .+++++.+.|.+ +++||+||+.++++|++|++...|.++. .+|.++|||++|+|+++|+++..+
T Consensus 1 m~~~~~~~~~---~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~~--~~p~~~g~e~~G~V~~vG~~v~~~ 75 (375)
T cd08282 1 MKAVVYGGPG---NVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTGA--EPGLVLGHEAMGEVEEVGSAVESL 75 (375)
T ss_pred CceEEEecCC---ceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCC--CCCceeccccEEEEEEeCCCCCcC
Confidence 8999997665 388999999996 7999999999999999999999887762 347899999999999999999999
Q ss_pred CCCCEEEE-------Ec------------------------------CCceeeeEEeecCC--ceeeCCCCCCHH---hh
Q 020487 80 KVGDQVCA-------LL------------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLK---DA 117 (325)
Q Consensus 80 ~~Gd~V~~-------~~------------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~---~a 117 (325)
++||+|+. .| .+|+|++|+.++.+ .++++|++++++ .+
T Consensus 76 ~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~ 155 (375)
T cd08282 76 KVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDY 155 (375)
T ss_pred CCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhhe
Confidence 99999986 22 13889999999975 899999999998 56
Q ss_pred ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchH
Q 020487 118 AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDF 196 (325)
Q Consensus 118 a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 196 (325)
+.+...+.++|.++ ..+++++|++|+|.|+ |.+|++++|+++..|+ +|+++++++++.+.++++|+. .++.+...+
T Consensus 156 a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~~~~ 232 (375)
T cd08282 156 LMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSDGDP 232 (375)
T ss_pred eeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCcccH
Confidence 77888999999998 7888999999999876 9999999999999998 799988899999999999984 566666667
Q ss_pred HHHHHHHhCCCcccEEEeCCChHH------------HHHhhccccCCCEEEEEeccCCcc------------cccchHHH
Q 020487 197 VARVKEETGGKGVDVILDCMGASY------------FQRNLGSLNIDGRLFIIGTQGGAK------------TELNITSL 252 (325)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~~------------~~~~~~~l~~~g~~v~~g~~~~~~------------~~~~~~~~ 252 (325)
.+.+.+.++ +++|+++||+|... +..++++++++|+++.+|...... ..++...+
T Consensus 233 ~~~i~~~~~-~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (375)
T cd08282 233 VEQILGLEP-GGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLL 311 (375)
T ss_pred HHHHHHhhC-CCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHH
Confidence 777777776 57999999998763 678899999999999887644211 12344445
Q ss_pred HhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 253 FAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 253 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.++..+.+.... ..+.++.+++++.++++.+ .+.+.|+++++++|++.+.+++ .+|+|+.|
T Consensus 312 ~~~~~~~~~~~~~----------~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~~ 375 (375)
T cd08282 312 WAKGLSFGTGQAP----------VKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIKP 375 (375)
T ss_pred HhcCcEEEEecCC----------chhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 5555555543211 1223444788899999876 3789999999999999999888 88999875
No 93
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=100.00 E-value=7.7e-37 Score=271.56 Aligned_cols=308 Identities=28% Similarity=0.366 Sum_probs=248.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC-C-CCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY-P-PPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~-~-~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||++++..+++ .+++.+.|.|+|+++||+||+.++++|++|++++.+.. . ....+|.++|||++|+|+++|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~ 78 (341)
T PRK05396 1 MKALVKLKAEP--GLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTG 78 (341)
T ss_pred CceEEEecCCC--ceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCc
Confidence 89999987663 49999999999999999999999999999999776532 1 12234678999999999999999999
Q ss_pred CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (325)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (325)
+++||+|++.. .+|+|++|+.++.+.++++|+++++.+++.+ .++.+++.++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~~~~~~ 157 (341)
T PRK05396 79 FKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGNAVHTA 157 (341)
T ss_pred CCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHHHHHHH
Confidence 99999998752 3589999999999999999999999888754 4555555554
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
.. ...+|++++|.|+ |.+|++++++|+.+|+ +|+++..++++.+.++++|++.+++.+...+.+.+.+.+.++++|
T Consensus 158 ~~--~~~~g~~vlV~~~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d 234 (341)
T PRK05396 158 LS--FDLVGEDVLITGA-GPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFD 234 (341)
T ss_pred Hc--CCCCCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCC
Confidence 32 3468999999875 9999999999999999 688888888888889999999999888777888888888778899
Q ss_pred EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
++|||.|. ..+..++++++++|+++.+|.... ...++...+..+++.+.++...... +.+..+.+++.+
T Consensus 235 ~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~ 304 (341)
T PRK05396 235 VGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPG-DMAIDWNKVIFKGLTIKGIYGREMF---------ETWYKMSALLQS 304 (341)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC-CCcccHHHHhhcceEEEEEEccCcc---------chHHHHHHHHHc
Confidence 99999886 456888999999999999987553 2234455666677777765421110 122236678888
Q ss_pred C-ccccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 290 G-KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 290 g-~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+ ++.+.+.+.++++++++|++.+.+++ .||+++++
T Consensus 305 ~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~ 340 (341)
T PRK05396 305 GLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDW 340 (341)
T ss_pred CCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEec
Confidence 8 45566779999999999999998876 79999864
No 94
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=7e-37 Score=271.90 Aligned_cols=306 Identities=28% Similarity=0.382 Sum_probs=246.2
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC----------CCCCCCCCCCCceeEEEE
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP----------PPKGASPYPGLECSGTIL 70 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~----------~~~~~p~~~G~e~~G~V~ 70 (325)
|||+++... .+++++.+.|+++++||+|++.++++|++|+....|... ....+|.++|+|++|+|+
T Consensus 1 m~a~~~~~~----~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~ 76 (341)
T cd08262 1 MRAAVFRDG----PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVV 76 (341)
T ss_pred CceEEEeCC----ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEE
Confidence 899998764 399999999999999999999999999999999887321 122346789999999999
Q ss_pred EecCCCCC-CCCCCEEEEEc-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 71 SVGKNVSR-WKVGDQVCALL-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 71 ~vG~~~~~-~~~Gd~V~~~~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
++|++++. |++||+|++++ ..|+|++|+.++.+.++++|+++++++++ ++.++.+||+++
T Consensus 77 ~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~-~~~~~~~a~~~~- 154 (341)
T cd08262 77 DYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRVPDGLSMEDAA-LTEPLAVGLHAV- 154 (341)
T ss_pred EeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEECCCCCCHHHhh-hhhhHHHHHHHH-
Confidence 99999987 99999999872 35899999999999999999999998876 677888999985
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHH---HHHHHhCCCc
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVA---RVKEETGGKG 208 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~~~~~ 208 (325)
..++++++++|+|+|+ |.+|.+++|+|+.+|++ +++++.++++.+.++++|++++++.+...... .+.+..++++
T Consensus 155 ~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~ 233 (341)
T cd08262 155 RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPK 233 (341)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCC
Confidence 7888999999999986 99999999999999996 66677788888888899998888866542211 3445566678
Q ss_pred ccEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487 209 VDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 287 (325)
Q Consensus 209 ~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
+|+++||+|.. .+...+++++++|+++.+|...... .........+++.+.+..... . +.++.+.+++
T Consensus 234 ~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~l~ 302 (341)
T cd08262 234 PAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD-NIEPALAIRKELTLQFSLGYT------P----EEFADALDAL 302 (341)
T ss_pred CCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC-ccCHHHHhhcceEEEEEeccc------H----HHHHHHHHHH
Confidence 99999999974 6678899999999999998764321 223223344666666432211 1 1334478889
Q ss_pred HCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 288 AVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 288 ~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.+|.+.+ .+.+.+++++++++++.+.+++..+|+|++
T Consensus 303 ~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 303 AEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred HcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 9998875 447899999999999999999988999875
No 95
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=100.00 E-value=4e-37 Score=251.81 Aligned_cols=301 Identities=23% Similarity=0.291 Sum_probs=250.9
Q ss_pred CcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCC--CCCCCCCCceeEEEEEec--CCCCCCCCCCEEEE
Q 020487 12 PEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPK--GASPYPGLECSGTILSVG--KNVSRWKVGDQVCA 87 (325)
Q Consensus 12 ~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~--~~p~~~G~e~~G~V~~vG--~~~~~~~~Gd~V~~ 87 (325)
++.+++++.+.|+|+++|||+|+.|.|+.|.- +|.....+ ..|.-+|...+|.++... |+...|++||.|++
T Consensus 24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPym----Rgrm~d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~ 99 (340)
T COG2130 24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYM----RGRMSDAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG 99 (340)
T ss_pred CCCceeEeccCCCCCcCceEEEEEEeccCHHH----eecccCCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe
Confidence 36699999999999999999999999999833 23332222 225567777765444433 56788999999999
Q ss_pred EcCCceeeeEEeecCCceeeCCCCCC--HHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487 88 LLGGGGYAEKVAVPAGQVLPVPSGVS--LKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (325)
Q Consensus 88 ~~~~g~~~~~~~~~~~~~~~~p~~~~--~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~ 165 (325)
. .+|++|..++.+.+.+++...- ......|.++..|||.+|.+..+.++|++++|.+|+|++|..+.|+|+..|+
T Consensus 100 ~---~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~ 176 (340)
T COG2130 100 V---SGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGC 176 (340)
T ss_pred c---ccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCC
Confidence 9 5799999999999999964321 1233468999999999999999999999999999999999999999999999
Q ss_pred EEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc
Q 020487 166 RVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK 244 (325)
Q Consensus 166 ~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (325)
+|+.++-++++...+++ +|++.++|++.+++.+.+.+.+. +++|+.||++|++.+...+..|+..+|++.||.....+
T Consensus 177 rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P-~GIDvyfeNVGg~v~DAv~~~ln~~aRi~~CG~IS~YN 255 (340)
T COG2130 177 RVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACP-KGIDVYFENVGGEVLDAVLPLLNLFARIPVCGAISQYN 255 (340)
T ss_pred eEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCC-CCeEEEEEcCCchHHHHHHHhhccccceeeeeehhhcC
Confidence 99999999999999986 99999999999999999999998 58999999999999999999999999999999876532
Q ss_pred cc------cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCc
Q 020487 245 TE------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHI 318 (325)
Q Consensus 245 ~~------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~ 318 (325)
.+ .....++.+++++.|+-..... .....+..+++..|+++|+++...+.+-.|+.+++||..|.++++.
T Consensus 256 ~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~----~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~gLl~G~N~ 331 (340)
T COG2130 256 APELPPGPRRLPLLMAKRLRVQGFIVASDY----DQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFIGLLSGKNF 331 (340)
T ss_pred CCCCCCCcchhhHHHhhhheeEEEEechhh----hhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHHHHhcCCcc
Confidence 11 2244566788999998764332 2234456666999999999998888888899999999999999999
Q ss_pred eeEEEe
Q 020487 319 GKIMLV 324 (325)
Q Consensus 319 gkvvi~ 324 (325)
||.|++
T Consensus 332 GK~vvK 337 (340)
T COG2130 332 GKLVVK 337 (340)
T ss_pred ceEEEE
Confidence 999986
No 96
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.3e-36 Score=269.12 Aligned_cols=315 Identities=31% Similarity=0.500 Sum_probs=255.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
.||+++...+.++.+++++.+.|.|.++||+|++.++++|++|+..+.+..+....+|.++|||++|+|+.+|+++..|+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~ 80 (331)
T cd08273 1 NREVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFE 80 (331)
T ss_pred CeeEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCC
Confidence 37899998888888999999999999999999999999999999998887654334577899999999999999999999
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+||+|+++...|+|++|+.++.+.++++|+++++.+++.++.++.++|.++.....+.++++++|+|++|.+|+++++++
T Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a 160 (331)
T cd08273 81 VGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELA 160 (331)
T ss_pred CCCEEEEeCCCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 99999999766899999999999999999999999999999999999999877788999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
+..|++|+.++. +++.+.++++|+.. ++.....+... +.. ++++|++++|+++......+++++++|+++.+|..
T Consensus 161 ~~~g~~v~~~~~-~~~~~~~~~~g~~~-~~~~~~~~~~~--~~~-~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~ 235 (331)
T cd08273 161 LLAGAEVYGTAS-ERNHAALRELGATP-IDYRTKDWLPA--MLT-PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGN 235 (331)
T ss_pred HHcCCEEEEEeC-HHHHHHHHHcCCeE-EcCCCcchhhh--hcc-CCCceEEEECCchHHHHHHHHHhcCCCEEEEEccC
Confidence 999999999997 88888888888654 44444343333 222 35799999999998888889999999999999876
Q ss_pred CCccc-ccch--H------------HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487 241 GGAKT-ELNI--T------------SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 305 (325)
Q Consensus 241 ~~~~~-~~~~--~------------~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~ 305 (325)
..... .... . ....++++...... . ....+....+.++.+++++.+|.+.+.+.+.++++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~p~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 312 (331)
T cd08273 236 SSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWR--D-RAEDPKLFRQDLTELLDLLAKGKIRPKIAKRLPLSEV 312 (331)
T ss_pred CCCCCccccccchhhhhhhhhhhcceeccceeEEEeech--h-cccCHHHHHHHHHHHHHHHHCCCccCCcceEEcHHHH
Confidence 53211 1111 0 01112333333222 1 1112223455677788999999998877889999999
Q ss_pred HHHHHHHHhCCCceeEEE
Q 020487 306 AEAHQLMESSQHIGKIML 323 (325)
Q Consensus 306 ~~a~~~~~~~~~~gkvvi 323 (325)
+++++.+.+++..||+|+
T Consensus 313 ~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 313 AEAHRLLESGKVVGKIVL 330 (331)
T ss_pred HHHHHHHHcCCCcceEEe
Confidence 999999998888889876
No 97
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=4.6e-36 Score=264.76 Aligned_cols=319 Identities=33% Similarity=0.542 Sum_probs=262.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..+++.+++++++.+.|++.+++|+|++.++++|++|+..+.+..... .+|.++|||++|+|+.+|+++..++
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~-~~~~~~g~e~~G~v~~~G~~~~~~~ 79 (325)
T cd08271 1 MKAWVLPKPGAALQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAW-SYPHVPGVDGAGVVVAVGAKVTGWK 79 (325)
T ss_pred CeeEEEccCCCcceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCC-CCCcccccceEEEEEEeCCCCCcCC
Confidence 899999988853459999999999999999999999999999999887765321 1256789999999999999999999
Q ss_pred CCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHH
Q 020487 81 VGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAI 157 (325)
Q Consensus 81 ~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~ 157 (325)
+||+|+++. ..|+|++|+.++.+.++++|+++++.+++.+...+.+++.++.....+++|++++|+|+++.+|++++
T Consensus 80 ~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~ 159 (325)
T cd08271 80 VGDRVAYHASLARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAV 159 (325)
T ss_pred CCCEEEeccCCCCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHH
Confidence 999999985 35899999999999999999999999999999999999999988888999999999999899999999
Q ss_pred HHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEE
Q 020487 158 QMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 158 ~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~ 237 (325)
++++..|++|+++. ++++.+.++++|++.+++.....+...+.+..+++++|++++|+++......+++++++|+++.+
T Consensus 160 ~~a~~~g~~v~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~ 238 (325)
T cd08271 160 QLAKRAGLRVITTC-SKRNFEYVKSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCI 238 (325)
T ss_pred HHHHHcCCEEEEEE-cHHHHHHHHHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEE
Confidence 99999999999887 66777888889998888877766777778777777899999999988777789999999999998
Q ss_pred eccCCcccccchHHHHhhccEeeecccccccchh---HHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487 238 GTQGGAKTELNITSLFAKRLTVQAAGLRSRSTEN---KALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 314 (325)
Q Consensus 238 g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~ 314 (325)
+...... ... .+.+++.+....+....... ......+.+.++++++.++.+.+.....|+++++.++++.+.+
T Consensus 239 ~~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~~~~~~ 314 (325)
T cd08271 239 QGRPDAS---PDP-PFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQLPEALRALKD 314 (325)
T ss_pred cCCCCCc---chh-HHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccceEEcHHHHHHHHHHHHc
Confidence 7543221 111 12334444333222211000 1123455667788999999988777788999999999999998
Q ss_pred CCCceeEEEeC
Q 020487 315 SQHIGKIMLVP 325 (325)
Q Consensus 315 ~~~~gkvvi~~ 325 (325)
+...+|+++++
T Consensus 315 ~~~~~kiv~~~ 325 (325)
T cd08271 315 RHTRGKIVVTI 325 (325)
T ss_pred CCccceEEEEC
Confidence 88889999875
No 98
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=2.3e-36 Score=267.83 Aligned_cols=302 Identities=31% Similarity=0.458 Sum_probs=250.3
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++. +++++.+.|+++++||+||+.++++|+.|+....|.++.. +|.++|+|++|+|+.+|++++.++
T Consensus 1 ~~a~~~~~~~~---~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~~--~p~~~g~~~~G~v~~vG~~v~~~~ 75 (334)
T cd08234 1 MKALVYEGPGE---LEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGAA--PPLVPGHEFAGVVVAVGSKVTGFK 75 (334)
T ss_pred CeeEEecCCCc---eEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCCC--CCcccccceEEEEEEeCCCCCCCC
Confidence 89999987663 8899999999999999999999999999999998877643 577899999999999999999999
Q ss_pred CCCEEEEE---------------------------cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCAL---------------------------LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~---------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+.. ...|+|++|+.++.+.++++|+++++.+++.+ ..+.++++++ .
T Consensus 76 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~l-~ 153 (334)
T cd08234 76 VGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVHGL-D 153 (334)
T ss_pred CCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHHHH-H
Confidence 99999871 13588999999999999999999999988766 7778899888 7
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
.++++++++++|+|+ |.+|.+++++|+..|++ |+++++++++.+.++++|.+.+++.+...+... ..+.++++|++
T Consensus 154 ~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~~~~~~~vd~v 230 (334)
T cd08234 154 LLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQ--KEDNPYGFDVV 230 (334)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHH--HHhcCCCCcEE
Confidence 889999999999985 99999999999999997 888999999999888899888887776655444 44556689999
Q ss_pred EeCCCh-HHHHHhhccccCCCEEEEEeccCC-cccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 290 (325)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (325)
+||++. ......+++++++|+++.+|.... ....++...+..+++++.+.... .+.++.+.+++.++
T Consensus 231 ~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~ 299 (334)
T cd08234 231 IEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFIN-----------PYTFPRAIALLESG 299 (334)
T ss_pred EECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccC-----------HHHHHHHHHHHHcC
Confidence 999974 556788999999999999986543 22334444445567777765421 12345588889999
Q ss_pred cccc--ccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 291 KVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 291 ~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
++.+ .+..++++++++++++.+.+ ...+|+|+.
T Consensus 300 ~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi~ 334 (334)
T cd08234 300 KIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVVV 334 (334)
T ss_pred CCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEeC
Confidence 8864 35788999999999999998 778898863
No 99
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=100.00 E-value=1e-36 Score=268.34 Aligned_cols=288 Identities=24% Similarity=0.351 Sum_probs=237.8
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|||+++..++ .+++++.+.|++.++||+||+.++++|++|.....|.++ .|.++|+|++|+|+++|++ ++
T Consensus 1 ~~a~~~~~~~---~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~----~~~~~G~e~~G~Vv~~G~~---~~ 70 (319)
T cd08242 1 MKALVLDGGL---DLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP----FPGVPGHEFVGIVEEGPEA---EL 70 (319)
T ss_pred CeeEEEeCCC---cEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC----CCCccCceEEEEEEEeCCC---CC
Confidence 8999998754 399999999999999999999999999999999988765 3678999999999999998 67
Q ss_pred CCCEEEE---------------------------E-cCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCA---------------------------L-LGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~---------------------------~-~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|.. + ..+|+|++|+.++.+.++++|++++.++++.+ .+..++|.++
T Consensus 71 ~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~~~- 148 (319)
T cd08242 71 VGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALEIL- 148 (319)
T ss_pred CCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHHHH-
Confidence 9999963 1 12589999999999999999999999888754 4455666554
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
+..+++++++++|+|+ |.+|.+++|+|+.+|++|++++.++++.+.++++|++.+++.... +.++++|++
T Consensus 149 ~~~~~~~g~~vlV~g~-g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~---------~~~~~~d~v 218 (319)
T cd08242 149 EQVPITPGDKVAVLGD-GKLGLLIAQVLALTGPDVVLVGRHSEKLALARRLGVETVLPDEAE---------SEGGGFDVV 218 (319)
T ss_pred HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCcEEeCcccc---------ccCCCCCEE
Confidence 7788999999999984 999999999999999999999999999999999999887765331 345689999
Q ss_pred EeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCc
Q 020487 213 LDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 213 i~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 291 (325)
+||+|. ..+..++++++++|+++..+.... ...++...+..++.++.+..... ++.+++++.++.
T Consensus 219 id~~g~~~~~~~~~~~l~~~g~~v~~~~~~~-~~~~~~~~~~~~~~~i~~~~~~~-------------~~~~~~~~~~~~ 284 (319)
T cd08242 219 VEATGSPSGLELALRLVRPRGTVVLKSTYAG-PASFDLTKAVVNEITLVGSRCGP-------------FAPALRLLRKGL 284 (319)
T ss_pred EECCCChHHHHHHHHHhhcCCEEEEEcccCC-CCccCHHHheecceEEEEEeccc-------------HHHHHHHHHcCC
Confidence 999987 456888899999999998765432 33455556667788887764322 233778899999
Q ss_pred c--ccccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 292 V--KPVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 292 l--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+ .+.+.+.|+++++++|++.+.++. .+|+|++|
T Consensus 285 l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~~ 319 (319)
T cd08242 285 VDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLRP 319 (319)
T ss_pred CChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeCC
Confidence 8 456789999999999999998766 48999987
No 100
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=2e-36 Score=269.46 Aligned_cols=306 Identities=30% Similarity=0.489 Sum_probs=250.0
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
||+++++.++. +++++.+.|.| +++||+||+.++++|++|+..+.|.++. ..|.++|||++|+|+++|+++..+
T Consensus 1 m~~~~~~~~~~---~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~--~~~~~~g~e~~G~V~~vG~~v~~~ 75 (345)
T cd08287 1 MRATVIHGPGD---IRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSPT--RAPAPIGHEFVGVVEEVGSEVTSV 75 (345)
T ss_pred CceeEEecCCc---eeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCCC--CCCcccccceEEEEEEeCCCCCcc
Confidence 89999986554 88999999996 8999999999999999999988887653 346789999999999999999999
Q ss_pred CCCCEEEE-Ec--------------------------CCceeeeEEeecCC--ceeeCCCCCCHHhhc-----cCcchHH
Q 020487 80 KVGDQVCA-LL--------------------------GGGGYAEKVAVPAG--QVLPVPSGVSLKDAA-----AFPEVAC 125 (325)
Q Consensus 80 ~~Gd~V~~-~~--------------------------~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa-----~l~~~~~ 125 (325)
++||+|+. +. .+|+|++|+.++.+ .++++|++++++.+. ++...+.
T Consensus 76 ~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~~~~ 155 (345)
T cd08287 76 KPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSDVMG 155 (345)
T ss_pred CCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhcHHH
Confidence 99999987 21 12889999999875 899999999873221 2335688
Q ss_pred HHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh
Q 020487 126 TVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 126 ~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
+|+.++ ....++++++++|.| +|.+|++++++|+..|++ ++++.+++++.+.++++|++.++++....+.+.+.+.+
T Consensus 156 ~a~~~~-~~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~ 233 (345)
T cd08287 156 TGHHAA-VSAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELT 233 (345)
T ss_pred HHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhc
Confidence 899887 467889999999987 599999999999999995 78888888888888999999999988877888888888
Q ss_pred CCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHH
Q 020487 205 GGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNV 283 (325)
Q Consensus 205 ~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 283 (325)
++.++|+++||+|+ ..+..++++++++|+++.+|.... ...++....+.+++++.+.... ..+.++.+
T Consensus 234 ~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 302 (345)
T cd08287 234 GGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHG-GVELDVRELFFRNVGLAGGPAP----------VRRYLPEL 302 (345)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCC-CCccCHHHHHhcceEEEEecCC----------cHHHHHHH
Confidence 87889999999986 457888999999999999886553 2344544556788888763211 12344558
Q ss_pred HHHHHCCcccc--ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 284 WPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++++.++.+++ ++.+.++++++++|++.+.+.... |++++|
T Consensus 303 ~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~~ 345 (345)
T cd08287 303 LDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLRP 345 (345)
T ss_pred HHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeCC
Confidence 88999999875 457889999999999998876654 999986
No 101
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=100.00 E-value=8.7e-36 Score=262.44 Aligned_cols=322 Identities=38% Similarity=0.616 Sum_probs=269.9
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCC-CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIK-DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRW 79 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~-~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~ 79 (325)
|+|+++...+.+..+++.+.+ |.+. +++++|++.++++|++|+..+.+........|.++|+|++|+|+.+|+++..+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~ 79 (323)
T cd08241 1 MKAVVCKELGGPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGF 79 (323)
T ss_pred CeEEEEecCCCcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCC
Confidence 899999877666668887777 6665 59999999999999999998887664333346678999999999999999999
Q ss_pred CCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHH
Q 020487 80 KVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQM 159 (325)
Q Consensus 80 ~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~ 159 (325)
++||+|+++...|++++|+.++.+.++++|++++..+++.+..+..+|+.++.....++++++++|+|+++.+|++++++
T Consensus 80 ~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~ 159 (323)
T cd08241 80 KVGDRVVALTGQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQL 159 (323)
T ss_pred CCCCEEEEecCCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHH
Confidence 99999999975589999999999999999999999999889999999999987778899999999999999999999999
Q ss_pred HHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487 160 GKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
++..|++|++++.+.++.+.++++|.+.+++.....+...+.+.+.++++|.+++|+|+..+...+++++++|+++.+|.
T Consensus 160 a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~ 239 (323)
T cd08241 160 AKALGARVIAAASSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGF 239 (323)
T ss_pred HHHhCCEEEEEeCCHHHHHHHHHcCCceeeecCCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEcc
Confidence 99999999999999999998888998888877777777788888777789999999999888888999999999999986
Q ss_pred cCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCce
Q 020487 240 QGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIG 319 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~g 319 (325)
.......++....+.+++++.+..+..... ..+....+.++.+.+++.++.+.+..+..|++++++++++.+.++...+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (323)
T cd08241 240 ASGEIPQIPANLLLLKNISVVGVYWGAYAR-REPELLRANLAELFDLLAEGKIRPHVSAVFPLEQAAEALRALADRKATG 318 (323)
T ss_pred CCCCcCcCCHHHHhhcCcEEEEEecccccc-hhHHHHHHHHHHHHHHHHCCCcccccceEEcHHHHHHHHHHHHhCCCCC
Confidence 543222233334456788888876544322 2223345566778899999998877888999999999999998888888
Q ss_pred eEEEe
Q 020487 320 KIMLV 324 (325)
Q Consensus 320 kvvi~ 324 (325)
|++++
T Consensus 319 ~vvv~ 323 (323)
T cd08241 319 KVVLT 323 (323)
T ss_pred cEEeC
Confidence 88863
No 102
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=100.00 E-value=3.7e-36 Score=267.37 Aligned_cols=302 Identities=27% Similarity=0.409 Sum_probs=245.0
Q ss_pred EEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCC-CCC-CCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 4 IVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGS-YPP-PKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 4 ~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~-~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
+++...+ .+++++.+.|.+.++||+|++.++++|+.|++.+.+. .+. ...+|.++|+|++|+|+++|++++.|++
T Consensus 2 ~~~~~~~---~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~ 78 (343)
T cd05285 2 AVLHGPG---DLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV 78 (343)
T ss_pred ceEecCC---ceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC
Confidence 4556543 3889999999999999999999999999999876432 111 1124668899999999999999999999
Q ss_pred CCEEEE------------------------E-c---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 82 GDQVCA------------------------L-L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 82 Gd~V~~------------------------~-~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
||+|++ + . ..|+|++|++++++.++++|+++++++++.+ .++.+|++++ .
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~ 156 (343)
T cd05285 79 GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R 156 (343)
T ss_pred CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence 999986 2 1 2589999999999999999999999998876 5778899887 8
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchH---HHHHHHHhCCCcc
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDF---VARVKEETGGKGV 209 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~ 209 (325)
.+.++++++++|.|+ |.+|.+++++|+.+|++ |+++++++++.+.++++|++.+++.+...+ .+.+.+.++++++
T Consensus 157 ~~~~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd05285 157 RAGVRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGP 235 (343)
T ss_pred hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence 889999999999876 89999999999999997 889988899999889999999988776654 6777788887889
Q ss_pred cEEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487 210 DVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 288 (325)
Q Consensus 210 d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
|+++||.|.. .+...+++++++|+++.+|..... ..++......+++.+.+..... +.++.+++++.
T Consensus 236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~l~ 303 (343)
T cd05285 236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE-VTLPLSAASLREIDIRGVFRYA-----------NTYPTAIELLA 303 (343)
T ss_pred CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-CccCHHHHhhCCcEEEEeccCh-----------HHHHHHHHHHH
Confidence 9999999976 678889999999999999854432 3344445555677766653221 23445788899
Q ss_pred CCccc--cccccccchhhHHHHHHHHHhCC-CceeEEE
Q 020487 289 VGKVK--PVIYKYLPLCEAAEAHQLMESSQ-HIGKIML 323 (325)
Q Consensus 289 ~g~l~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvi 323 (325)
++.+. +.+.++|+++++.+|++.+.+++ ..+|+++
T Consensus 304 ~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 304 SGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred cCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 99865 44678899999999999998875 4589887
No 103
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=100.00 E-value=2.6e-36 Score=266.47 Aligned_cols=297 Identities=31% Similarity=0.482 Sum_probs=241.7
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||++++..++ .+.+++++.+.|+++++||+|++.++++|++|+..+.+.. . ..+|.++|||++|+|+++|+++..|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~~-~-~~~~~~~g~e~~G~v~~vG~~v~~~~ 77 (325)
T cd08264 1 MKALVFEKSG-IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAVK-V-KPMPHIPGAEFAGVVEEVGDHVKGVK 77 (325)
T ss_pred CeeEEeccCC-CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCCC-C-CCCCeecccceeEEEEEECCCCCCCC
Confidence 8999998766 5668888888888999999999999999999998876422 1 12466899999999999999999999
Q ss_pred CCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 81 VGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 81 ~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
+||+|+.+. ..|+|++|+.++.+.++++|+++++++++.++.++.++|+++..
T Consensus 78 ~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~ 157 (325)
T cd08264 78 KGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT 157 (325)
T ss_pred CCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 999998651 35899999999999999999999999999999999999999854
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
.+++++++++|+|++|.+|++++++|+.+|++|+++++ .+.++++|++++++... ..+.+.+.+ +++|+++
T Consensus 158 -~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~~~g~~~~~~~~~--~~~~l~~~~--~~~d~vl 228 (325)
T cd08264 158 -AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLKEFGADEVVDYDE--VEEKVKEIT--KMADVVI 228 (325)
T ss_pred -cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHHHhCCCeeecchH--HHHHHHHHh--CCCCEEE
Confidence 88999999999999999999999999999999988873 36667899888886543 244555555 5799999
Q ss_pred eCCChHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc
Q 020487 214 DCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK 293 (325)
Q Consensus 214 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 293 (325)
+|+|...+..++++++++|+++.+|........++...+..++.++.+...... +.++.+++++.+.+
T Consensus 229 ~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~l~~~~~-- 296 (325)
T cd08264 229 NSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTR----------KELLELVKIAKDLK-- 296 (325)
T ss_pred ECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCH----------HHHHHHHHHHHcCC--
Confidence 999998888999999999999999875333345566666667777777643211 22333667775433
Q ss_pred cccccccchhhHHHHHHHHHhCCCceeE
Q 020487 294 PVIYKYLPLCEAAEAHQLMESSQHIGKI 321 (325)
Q Consensus 294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkv 321 (325)
..+.+.|+++++++|++.+.+++..+|+
T Consensus 297 ~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 297 VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 4466889999999999999888777775
No 104
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=100.00 E-value=9.1e-36 Score=263.48 Aligned_cols=311 Identities=25% Similarity=0.308 Sum_probs=253.3
Q ss_pred EEEEEcCCC----CCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCC
Q 020487 2 KAIVITQPG----SPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKN 75 (325)
Q Consensus 2 ~a~~~~~~~----~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~ 75 (325)
||+++...+ .++.+++++.+.|++.++||+||+.++++|+.|.....+.... +...+.++|+|++|+|+++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~ 82 (329)
T cd05288 3 RQVVLAKRPEGPPPPDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP 82 (329)
T ss_pred cEEEEeccCCCCCCccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC
Confidence 677777554 4577999999999999999999999999999887655553211 1112457899999999999965
Q ss_pred CCCCCCCCEEEEEcCCceeeeEEeecC-CceeeCCCCCC--HHhhcc-CcchHHHHHHHHHhhcCCCCCCEEEEEcCCch
Q 020487 76 VSRWKVGDQVCALLGGGGYAEKVAVPA-GQVLPVPSGVS--LKDAAA-FPEVACTVWSTVFMTSHLSPGESFLVHGGSSG 151 (325)
Q Consensus 76 ~~~~~~Gd~V~~~~~~g~~~~~~~~~~-~~~~~~p~~~~--~~~aa~-l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~ 151 (325)
.+++||+|+++ ++|++|+.++. +.++++|++++ ..++++ +++++.++|+++.....+.++++++|+|++|.
T Consensus 83 --~~~~Gd~V~~~---~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ 157 (329)
T cd05288 83 --DFKVGDLVSGF---LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGA 157 (329)
T ss_pred --CCCCCCEEecc---cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcch
Confidence 79999999987 58999999999 99999999985 445545 88999999999877788899999999998899
Q ss_pred HHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccC
Q 020487 152 IGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNI 230 (325)
Q Consensus 152 ~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~ 230 (325)
+|++++++++..|++|+++++++++.+.+++ +|++.+++.....+...+.+..+ +++|+++||+|+..+..+++++++
T Consensus 158 ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~-~~~d~vi~~~g~~~~~~~~~~l~~ 236 (329)
T cd05288 158 VGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAP-DGIDVYFDNVGGEILDAALTLLNK 236 (329)
T ss_pred HHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhcc-CCceEEEEcchHHHHHHHHHhcCC
Confidence 9999999999999999999999999998887 99988888877667777777765 689999999999888899999999
Q ss_pred CCEEEEEeccCCcccc-----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhH
Q 020487 231 DGRLFIIGTQGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEA 305 (325)
Q Consensus 231 ~g~~v~~g~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~ 305 (325)
+|+++.+|........ .+....+.+++++.+....... ....+.++.+.+++.+|.+++.....++++++
T Consensus 237 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~~ 311 (329)
T cd05288 237 GGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYA-----DRFPEALAELAKWLAEGKLKYREDVVEGLENA 311 (329)
T ss_pred CceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhH-----HHHHHHHHHHHHHHHCCCccccccccccHHHH
Confidence 9999999865542211 2344456788888876543221 12345666688999999988766677999999
Q ss_pred HHHHHHHHhCCCceeEEE
Q 020487 306 AEAHQLMESSQHIGKIML 323 (325)
Q Consensus 306 ~~a~~~~~~~~~~gkvvi 323 (325)
+++++.+.+++..+|+++
T Consensus 312 ~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 312 PEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHhcCCCccceeC
Confidence 999999998888888874
No 105
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=100.00 E-value=1.3e-36 Score=271.08 Aligned_cols=320 Identities=32% Similarity=0.425 Sum_probs=247.2
Q ss_pred CEEEEEcCCCCCc-ceEEEeecCCCC-CCCeEEEEEeeeecChhhhhhhhCCCCC--------------CCCCCCCCCCc
Q 020487 1 MKAIVITQPGSPE-VLQLQEVEDPQI-KDDEVLIKVEATALNRADTLQRKGSYPP--------------PKGASPYPGLE 64 (325)
Q Consensus 1 m~a~~~~~~~~~~-~l~~~~~~~~~~-~~~ev~v~v~~~~i~~~D~~~~~g~~~~--------------~~~~p~~~G~e 64 (325)
|||+++..+++++ .+++++.+.|.| .++||+|++.++++|++|+....|.... ....|.++|||
T Consensus 1 ~~a~~~~~~~~~~~~~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e 80 (350)
T cd08248 1 MKAWQIHSYGGIDSLLLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRD 80 (350)
T ss_pred CceEEecccCCCcceeeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecce
Confidence 8999999888753 478899999999 4999999999999999999988774210 22347799999
Q ss_pred eeEEEEEecCCCCCCCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCC--
Q 020487 65 CSGTILSVGKNVSRWKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSP-- 139 (325)
Q Consensus 65 ~~G~V~~vG~~~~~~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~-- 139 (325)
++|+|+++|+++..+++||+|+++. ..|+|++|+.++.+.++++|+++++++++.++..+.++|+++.....+.+
T Consensus 81 ~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~ 160 (350)
T cd08248 81 CSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKN 160 (350)
T ss_pred eEEEEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCcc
Confidence 9999999999999999999999875 25899999999999999999999999999999999999999877777654
Q ss_pred --CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 140 --GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 140 --~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
|++++|+|++|.+|.+++++++.+|++|++++++ ++.+.++++|.+.+++.....+...+.. .+++|++++|+|
T Consensus 161 ~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~l~~---~~~vd~vi~~~g 236 (350)
T cd08248 161 AAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVKSLGADDVIDYNNEDFEEELTE---RGKFDVILDTVG 236 (350)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHHHhCCceEEECCChhHHHHHHh---cCCCCEEEECCC
Confidence 9999999998999999999999999999988855 5677778899888888766555544432 357999999999
Q ss_pred hHHHHHhhccccCCCEEEEEeccCCccc---ccchHH----HHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCC
Q 020487 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKT---ELNITS----LFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG 290 (325)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~---~~~~~~----~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 290 (325)
......++++++++|+++.+|....... ...... +......+....................++.+++++.+|
T Consensus 237 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 316 (350)
T cd08248 237 GDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDG 316 (350)
T ss_pred hHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCC
Confidence 9888889999999999999985432110 110000 000111110000000000000000123455588999999
Q ss_pred ccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 291 KVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 291 ~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.+.+.+.+.|++++++++++.+.+++..+|+++.
T Consensus 317 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 317 KIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred CEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 9887788999999999999999988878888863
No 106
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=100.00 E-value=6.4e-36 Score=265.64 Aligned_cols=307 Identities=35% Similarity=0.445 Sum_probs=246.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC--CCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY--PPPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~--~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||+++...++. .+++.+.+.|.|.++|++||+.++++|++|++.+.+.. .....+|.++|+|++|+|+.+|++++.
T Consensus 1 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~ 78 (341)
T cd05281 1 MKAIVKTKAGP--GAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTR 78 (341)
T ss_pred CcceEEecCCC--ceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCC
Confidence 89999997664 48899999999999999999999999999998765432 111224668999999999999999999
Q ss_pred CCCCCEEEEEc---------------------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHH
Q 020487 79 WKVGDQVCALL---------------------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTV 131 (325)
Q Consensus 79 ~~~Gd~V~~~~---------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l 131 (325)
+++||+|+++. ..|+|++|++++.+.++++|++++++.+ ++...+.++++++
T Consensus 79 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~~~a-~~~~~~~~a~~~~ 157 (341)
T cd05281 79 VKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKNDKDIPPEIA-SIQEPLGNAVHTV 157 (341)
T ss_pred CCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEECcCCCCHHHh-hhhhHHHHHHHHH
Confidence 99999998851 3588999999999999999999998554 5677778888876
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
. ...+++++++|.|+ |.+|++++++++..|+ +|+++.+++++.+.++++|++++++....++. .+.+..+++++|
T Consensus 158 ~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~vd 233 (341)
T cd05281 158 L--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPREEDVV-EVKSVTDGTGVD 233 (341)
T ss_pred H--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCcccccHH-HHHHHcCCCCCC
Confidence 4 45578999999876 9999999999999999 79988888888888889999888887766777 778888878999
Q ss_pred EEEeCCChH-HHHHhhccccCCCEEEEEeccCCcccccchH-HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHH
Q 020487 211 VILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIA 288 (325)
Q Consensus 211 ~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (325)
++|||+|.. .....+++|+++|+++.+|.... ....+.. ....+++.+.+...... .+.+..+.+++.
T Consensus 234 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~l~ 303 (341)
T cd05281 234 VVLEMSGNPKAIEQGLKALTPGGRVSILGLPPG-PVDIDLNNLVIFKGLTVQGITGRKM---------FETWYQVSALLK 303 (341)
T ss_pred EEEECCCCHHHHHHHHHHhccCCEEEEEccCCC-CcccccchhhhccceEEEEEecCCc---------chhHHHHHHHHH
Confidence 999999864 56788999999999999986543 2222222 24456666665432111 122344778899
Q ss_pred CCccc--cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 289 VGKVK--PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 289 ~g~l~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+|.+. +.+...++++++++|++.+.+++ .||+|++|
T Consensus 304 ~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 304 SGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred cCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 99876 45678899999999999999988 89999987
No 107
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=100.00 E-value=1.8e-35 Score=258.33 Aligned_cols=299 Identities=30% Similarity=0.491 Sum_probs=250.0
Q ss_pred CCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC--CceeeeEEe
Q 020487 22 DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG--GGGYAEKVA 99 (325)
Q Consensus 22 ~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~--~g~~~~~~~ 99 (325)
.|++.+++++|++.++++|+.|+..+.+.++....+|.++|+|++|+|+++|+++.++++||+|+++.. .|+|++|+.
T Consensus 2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 467899999999999999999999998876554456789999999999999999999999999998853 589999999
Q ss_pred ecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487 100 VPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (325)
Q Consensus 100 ~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
++++.++++|+++++++++.++..+.++|.++ +...+++|++++|+++++.+|.+++++++.+|++|+++++++++.+.
T Consensus 82 ~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~ 160 (303)
T cd08251 82 VPEDQVVRKPASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEY 160 (303)
T ss_pred ccHHHeEECCCCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHH
Confidence 99999999999999999999999999999998 57889999999999999999999999999999999999999999999
Q ss_pred HHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccE
Q 020487 180 CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLT 258 (325)
Q Consensus 180 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~ 258 (325)
++++|.+.+++.....+...+.+.+.++++|.+++|+++..+...+++++++|+++.+|..... ...++... +.+++.
T Consensus 161 ~~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~-~~~~~~ 239 (303)
T cd08251 161 LKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSV-LSNNQS 239 (303)
T ss_pred HHHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhH-hhcCce
Confidence 9999999998888777778888888878899999999988888889999999999999865422 12233333 233444
Q ss_pred eeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 259 VQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 259 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
+....+..... ..+....+.+.++.+++.+|.+++...+.|++++++++++.+.+++..+|+++
T Consensus 240 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 240 FHSVDLRKLLL-LDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred EEEEehHHhhh-hCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 43333222111 12233456667788999999988777899999999999999998888888874
No 108
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=100.00 E-value=2.6e-35 Score=258.64 Aligned_cols=300 Identities=24% Similarity=0.316 Sum_probs=245.3
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhh-hCCCCCC-CCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcC
Q 020487 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQR-KGSYPPP-KGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLG 90 (325)
Q Consensus 13 ~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~-~g~~~~~-~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~ 90 (325)
+.+++++.+.|++.++||+|++.++++|++|+..+ .|..+.. ...|.++|+|++|+|+++|++++.+++||+|+.+.
T Consensus 5 ~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~- 83 (312)
T cd08269 5 GRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLS- 83 (312)
T ss_pred CeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEec-
Confidence 35899999999999999999999999999999987 6654321 12367899999999999999999999999999985
Q ss_pred CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEE
Q 020487 91 GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFV 169 (325)
Q Consensus 91 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~ 169 (325)
.|+|++|+.++.+.++++|+++ ..++.+..++.++++++. ..+++++++++|+|+ |.+|.+++++|+..|++ |++
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g~-g~vg~~~~~la~~~g~~~v~~ 159 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-RGWIRAGKTVAVIGA-GFIGLLFLQLAAAAGARRVIA 159 (312)
T ss_pred CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEE
Confidence 4889999999999999999988 233322377788998885 788999999999975 89999999999999998 999
Q ss_pred EecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccc
Q 020487 170 TAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELN 248 (325)
Q Consensus 170 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~ 248 (325)
+++++++.+.++++|++.+++.+...+.+.+.+.+++.++|+++||.|. ......+++++++|+++.+|........++
T Consensus 160 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~ 239 (312)
T cd08269 160 IDRRPARLALARELGATEVVTDDSEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVP 239 (312)
T ss_pred ECCCHHHHHHHHHhCCceEecCCCcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccC
Confidence 9988888888889999888887777788888888887899999999975 456888999999999999986543333445
Q ss_pred hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc--ccccccchhhHHHHHHHHHhCCC-ceeEEE
Q 020487 249 ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP--VIYKYLPLCEAAEAHQLMESSQH-IGKIML 323 (325)
Q Consensus 249 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~--~~~~~~~l~~~~~a~~~~~~~~~-~gkvvi 323 (325)
...+..+++.+.++...... ...+.++.+.+++.++.+.+ ++.+.|++++++++++.+.+++. ..|+++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 240 FQTWNWKGIDLINAVERDPR------IGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred HHHHhhcCCEEEEecccCcc------chhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 55556677777665332211 12345666889999999886 35788999999999999988864 478876
No 109
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=7.1e-35 Score=258.46 Aligned_cols=320 Identities=35% Similarity=0.553 Sum_probs=262.0
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||++....+.+..+++++.+.|+|+++||+|++.++++|++|+....+.++.....|.++|||++|+|+.+|+++.++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~ 80 (337)
T cd08275 1 RAVVLTGFGGLDKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKV 80 (337)
T ss_pred CeEEEcCCCCccceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCC
Confidence 57777776766668888888888899999999999999999999888876544445778999999999999999999999
Q ss_pred CCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHH
Q 020487 82 GDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGK 161 (325)
Q Consensus 82 Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~ 161 (325)
||+|+++...|+|++|+.++.+.++++|+++++.+++.++.+..++|.++.....++++++++|+|++|.+|++++++++
T Consensus 81 G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~ 160 (337)
T cd08275 81 GDRVMGLTRFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCK 160 (337)
T ss_pred CCEEEEecCCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHH
Confidence 99999997778999999999999999999999999999999999999998888889999999999999999999999999
Q ss_pred HC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEecc
Q 020487 162 CQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 162 ~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~ 240 (325)
.. +..++... .+++.+.++.+|.+.+++.....+...+.+.++ +++|++++|+|+......+++++++|+++.+|..
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~ 238 (337)
T cd08275 161 TVPNVTVVGTA-SASKHEALKENGVTHVIDYRTQDYVEEVKKISP-EGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAA 238 (337)
T ss_pred HccCcEEEEeC-CHHHHHHHHHcCCcEEeeCCCCcHHHHHHHHhC-CCceEEEECCcHHHHHHHHHhhccCcEEEEEeec
Confidence 98 43433332 345777778899888888777777777777775 6799999999998888889999999999999865
Q ss_pred CCc-ccc---------------cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhh
Q 020487 241 GGA-KTE---------------LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCE 304 (325)
Q Consensus 241 ~~~-~~~---------------~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~ 304 (325)
... ... .....++.+++++.++.+..... ... .....++.+.+++.++.+.+.....|++++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (337)
T cd08275 239 NLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFE-ERE-LLTEVMDKLLKLYEEGKIKPKIDSVFPFEE 316 (337)
T ss_pred CCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhh-ChH-HHHHHHHHHHHHHHCCCCCCceeeEEcHHH
Confidence 431 111 11234566788888776542211 111 223456668888999998877788999999
Q ss_pred HHHHHHHHHhCCCceeEEEeC
Q 020487 305 AAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 305 ~~~a~~~~~~~~~~gkvvi~~ 325 (325)
++++++.+.+++..+|++++|
T Consensus 317 ~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 317 VGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred HHHHHHHHHcCCCcceEEEeC
Confidence 999999999888889999876
No 110
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=100.00 E-value=2.5e-35 Score=265.50 Aligned_cols=296 Identities=28% Similarity=0.380 Sum_probs=239.6
Q ss_pred eEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCC------CCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEE-
Q 020487 15 LQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSY------PPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCA- 87 (325)
Q Consensus 15 l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~------~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~- 87 (325)
+++++.|.|+++++||+|++.++++|++|++.+.+.. +....+|.++|||++|+|+++|++++.|++||+|+.
T Consensus 39 ~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~ 118 (384)
T cd08265 39 LRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAE 118 (384)
T ss_pred EEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEEC
Confidence 8999999999999999999999999999998876321 222345788999999999999999999999999985
Q ss_pred --------------------------EcCCceeeeEEeecCCceeeCCCC-------CCHHhhccCcchHHHHHHHHHhh
Q 020487 88 --------------------------LLGGGGYAEKVAVPAGQVLPVPSG-------VSLKDAAAFPEVACTVWSTVFMT 134 (325)
Q Consensus 88 --------------------------~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~l~~~~~~a~~~l~~~ 134 (325)
+..+|+|++|+.++++.++++|++ ++.. +++++.++++||+++...
T Consensus 119 ~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~ta~~al~~~ 197 (384)
T cd08265 119 EMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTSVAYNGLFIR 197 (384)
T ss_pred CCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHHHHHHHHHhh
Confidence 333689999999999999999986 3445 556778889999998665
Q ss_pred -cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCc---hHHHHHHHHhCCCcc
Q 020487 135 -SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTE---DFVARVKEETGGKGV 209 (325)
Q Consensus 135 -~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~ 209 (325)
.++++|++|+|+|+ |.+|++++++|+..|+ +|++++.++++.+.++++|++.+++.... .+...+.+.++++++
T Consensus 198 ~~~~~~g~~VlV~g~-g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gv 276 (384)
T cd08265 198 GGGFRPGAYVVVYGA-GPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGA 276 (384)
T ss_pred cCCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCC
Confidence 68999999999975 9999999999999999 79999988888888899999988876643 677788888888899
Q ss_pred cEEEeCCChH--HHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487 210 DVILDCMGAS--YFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 287 (325)
Q Consensus 210 d~vi~~~g~~--~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
|+++||.|.. .+...+++++++|+++.+|.... ...++...+..+..++.+...... ...++++++++
T Consensus 277 Dvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~l~~~~~~~~---------~~~~~~~~~ll 346 (384)
T cd08265 277 DIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAAT-TVPLHLEVLQVRRAQIVGAQGHSG---------HGIFPSVIKLM 346 (384)
T ss_pred CEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCC-CCcccHHHHhhCceEEEEeeccCC---------cchHHHHHHHH
Confidence 9999999963 56788999999999999986543 223344455556667776532111 12344488899
Q ss_pred HCCccccc--cccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 288 AVGKVKPV--IYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 288 ~~g~l~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
.++.+.+. +.+.|+++++++|++.+.++ ..+|+|+
T Consensus 347 ~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 347 ASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 99998753 57889999999999997554 5688875
No 111
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=100.00 E-value=2.1e-35 Score=261.18 Aligned_cols=298 Identities=27% Similarity=0.357 Sum_probs=243.5
Q ss_pred CEEEEEcCCCCC--cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSP--EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~--~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||++++..++++ ..+++++.+.|.+.++||+||+.++++|++|++...|..+. ..+|.++|||++|+|+++|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~-~~~~~~~g~e~~G~V~~vG~~v~~ 79 (329)
T cd08298 1 MKAMVLEKPGPIEENPLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPP-PKLPLIPGHEIVGRVEAVGPGVTR 79 (329)
T ss_pred CeEEEEecCCCCCCCCceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCC-CCCCccccccccEEEEEECCCCCC
Confidence 899999988742 35888888888899999999999999999999999887654 234779999999999999999999
Q ss_pred CCCCCEEEEE-----------c-----------------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHH
Q 020487 79 WKVGDQVCAL-----------L-----------------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWST 130 (325)
Q Consensus 79 ~~~Gd~V~~~-----------~-----------------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~ 130 (325)
+++||+|+.. + .+|+|++|+.++.+.++++|+++++.+++.+.+++.+||++
T Consensus 80 ~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~ 159 (329)
T cd08298 80 FSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRA 159 (329)
T ss_pred CcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHH
Confidence 9999999762 1 25889999999999999999999999999999999999999
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
+ +.++++++++++|+|+ |.+|++++++++..|++|+++++++++++.++++|++.+++.... .++++|
T Consensus 160 ~-~~~~~~~~~~vlV~g~-g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~----------~~~~vD 227 (329)
T cd08298 160 L-KLAGLKPGQRLGLYGF-GASAHLALQIARYQGAEVFAFTRSGEHQELARELGADWAGDSDDL----------PPEPLD 227 (329)
T ss_pred H-HhhCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEcCChHHHHHHHHhCCcEEeccCcc----------CCCccc
Confidence 8 8889999999999985 999999999999999999999999999999999999877765432 234799
Q ss_pred EEEeCCC-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 211 VILDCMG-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 211 ~vi~~~g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
+++++.+ ...+..++++++++|+++.+|.........+... +.++..+.+.... ..+.++.+.+++.+
T Consensus 228 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~i~~~~~~----------~~~~~~~~~~l~~~ 296 (329)
T cd08298 228 AAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-LWGEKTIRSVANL----------TRQDGEEFLKLAAE 296 (329)
T ss_pred EEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-hhCceEEEEecCC----------CHHHHHHHHHHHHc
Confidence 9999865 4567888999999999998874332211222222 2344555544321 11233447888889
Q ss_pred CccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 290 GKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 290 g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
+.+++. .+.|+++++++|++.+++++..||+|+
T Consensus 297 ~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 297 IPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred CCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 988764 588999999999999999988888774
No 112
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=100.00 E-value=3.6e-35 Score=262.02 Aligned_cols=318 Identities=30% Similarity=0.427 Sum_probs=240.1
Q ss_pred CEEEEEcCCCCCcceEEEeecCCC-CCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCC-C
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQ-IKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVS-R 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~-~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~-~ 78 (325)
.|++++..++++..++..+.+.|. +.++||+|++.++++|++|+..+.+........|.++|+|++|+|+++|++++ .
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~ 80 (352)
T cd08247 1 YKALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASE 80 (352)
T ss_pred CceEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccC
Confidence 478999988887555555555553 38999999999999999999887543221112367899999999999999998 8
Q ss_pred CCCCCEEEEEc-----CCceeeeEEeecCC----ceeeCCCCCCHHhhccCcchHHHHHHHHHhhc-CCCCCCEEEEEcC
Q 020487 79 WKVGDQVCALL-----GGGGYAEKVAVPAG----QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS-HLSPGESFLVHGG 148 (325)
Q Consensus 79 ~~~Gd~V~~~~-----~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~-~~~~~~~vli~g~ 148 (325)
|++||+|+++. ..|+|++|++++.. .++++|+++++.+++.++....++|+++.... ++++|++++|+|+
T Consensus 81 ~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga 160 (352)
T cd08247 81 WKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGG 160 (352)
T ss_pred CCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECC
Confidence 99999999885 25899999999987 78999999999999999999999999987666 7899999999999
Q ss_pred CchHHHHHHHHHHHC-CC-EEEEEecChhhHHHHHHcCCCEEEeCCCch---HHHHHHHH-hCCCcccEEEeCCCh-HHH
Q 020487 149 SSGIGTFAIQMGKCQ-GV-RVFVTAGSEEKLAVCKDLGADVCINYKTED---FVARVKEE-TGGKGVDVILDCMGA-SYF 221 (325)
Q Consensus 149 ~g~~G~~~~~~a~~~-g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~-~~~~~~d~vi~~~g~-~~~ 221 (325)
++.+|.+++++|+.. +. +++.+. ++++...++++|++.+++.+... +...+.+. ++++++|++|||+|+ ...
T Consensus 161 ~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~ 239 (352)
T cd08247 161 STSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLF 239 (352)
T ss_pred CchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHH
Confidence 999999999999987 55 566665 55556677889998888866544 44444444 436689999999998 566
Q ss_pred HHhhcccc---CCCEEEEEeccCCccccc-----------chHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHH
Q 020487 222 QRNLGSLN---IDGRLFIIGTQGGAKTEL-----------NITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAI 287 (325)
Q Consensus 222 ~~~~~~l~---~~g~~v~~g~~~~~~~~~-----------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (325)
..++++++ ++|+++.+++........ .... +.+++.+....+........ .+.++.+.+++
T Consensus 240 ~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 314 (352)
T cd08247 240 PHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARK-LFGSLGLWSYNYQFFLLDPN----ADWIEKCAELI 314 (352)
T ss_pred HHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhh-hhhhhcCCCcceEEEEecCC----HHHHHHHHHHH
Confidence 78888999 999999875332111000 0011 11222222221111100001 13455588899
Q ss_pred HCCccccccccccchhhHHHHHHHHHhCCCceeEEEe
Q 020487 288 AVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIMLV 324 (325)
Q Consensus 288 ~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 324 (325)
.++.+++.+.+.++++++++|++.+++++..||++++
T Consensus 315 ~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~ 351 (352)
T cd08247 315 ADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIK 351 (352)
T ss_pred hCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEe
Confidence 9999988788999999999999999998888999875
No 113
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=100.00 E-value=4.7e-35 Score=259.94 Aligned_cols=294 Identities=26% Similarity=0.361 Sum_probs=235.9
Q ss_pred cceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhh-CCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE--
Q 020487 13 EVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRK-GSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL-- 88 (325)
Q Consensus 13 ~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~-- 88 (325)
+.+++++.+.|+++++||+||+.++++|++|+..+. +..+. ....|.++|+|++|+|+++|++++.|++||+|+..
T Consensus 7 ~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~ 86 (339)
T cd08232 7 GDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPS 86 (339)
T ss_pred CceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccC
Confidence 349999999999999999999999999999998764 33321 11346789999999999999999999999999862
Q ss_pred -----------------------c-------CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC
Q 020487 89 -----------------------L-------GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138 (325)
Q Consensus 89 -----------------------~-------~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 138 (325)
. .+|+|++|++++.+.++++|+++++++++. ..++.++|+++.....+
T Consensus 87 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~~~~~- 164 (339)
T cd08232 87 RPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNRAGDL- 164 (339)
T ss_pred CcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHhcCCC-
Confidence 1 258999999999999999999999998875 57788999988666556
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHh-CCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEET-GGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~d~vi~~~ 216 (325)
++++|+|.|+ |.+|.+++++|+.+|+ +++++++++++.+.++++|++.+++.+...+ .+.. +..++|+++||.
T Consensus 165 ~~~~VLI~g~-g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~----~~~~~~~~~vd~vld~~ 239 (339)
T cd08232 165 AGKRVLVTGA-GPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLARDPL----AAYAADKGDFDVVFEAS 239 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhh----hhhhccCCCccEEEECC
Confidence 8999999885 8999999999999999 8999998888888888999988887765442 2222 234699999999
Q ss_pred Ch-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcccc-
Q 020487 217 GA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKP- 294 (325)
Q Consensus 217 g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~- 294 (325)
|. ..+...+++|+++|+++.+|... .....+...++.+++++.+.... .+.++.+++++.+|.+++
T Consensus 240 g~~~~~~~~~~~L~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~i~~~ 307 (339)
T cd08232 240 GAPAALASALRVVRPGGTVVQVGMLG-GPVPLPLNALVAKELDLRGSFRF-----------DDEFAEAVRLLAAGRIDVR 307 (339)
T ss_pred CCHHHHHHHHHHHhcCCEEEEEecCC-CCccCcHHHHhhcceEEEEEecC-----------HHHHHHHHHHHHcCCCCch
Confidence 95 56788899999999999998644 22333444455577777665321 123445788899998763
Q ss_pred -ccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 295 -VIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 295 -~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
.+.++|++++++++++.+.++...||+|+++
T Consensus 308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 308 PLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred hheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 4678999999999999999888889999875
No 114
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=100.00 E-value=4.4e-35 Score=260.15 Aligned_cols=301 Identities=31% Similarity=0.400 Sum_probs=240.6
Q ss_pred CCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--CCCCCCCCCCCceeEEEEEecCCCCCCCCCCEE
Q 020487 8 QPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSRWKVGDQV 85 (325)
Q Consensus 8 ~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V 85 (325)
.++.+ +++++.|.|.|.++||+||+.++++|++|+.++.+... ....+|.++|+|++|+|+++|++++.|++||+|
T Consensus 6 ~~~~~--~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V 83 (340)
T TIGR00692 6 KPGYG--AELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYV 83 (340)
T ss_pred cCCCC--cEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEE
Confidence 44444 88899999999999999999999999999988765421 111246689999999999999999999999999
Q ss_pred EE---------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCC
Q 020487 86 CA---------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLS 138 (325)
Q Consensus 86 ~~---------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~ 138 (325)
++ +...|+|++|++++++.++++|++++.+++ +++.++.++++++ ....+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~--~~~~~ 160 (340)
T TIGR00692 84 SVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTV--LAGPI 160 (340)
T ss_pred EECCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHH--HccCC
Confidence 87 224589999999999999999999998655 5777888888876 34568
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+|++++|.|+ |.+|.+++++++.+|++ |+++..++++.+.++++|++.+++.....+.+.+.+.++++++|+++||+|
T Consensus 161 ~g~~vlI~~~-g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g 239 (340)
T TIGR00692 161 SGKSVLVTGA-GPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSG 239 (340)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCC
Confidence 8999999875 99999999999999996 888877888888888999988888877778888888888788999999988
Q ss_pred h-HHHHHhhccccCCCEEEEEeccCCcccccchH-HHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--
Q 020487 218 A-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNIT-SLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK-- 293 (325)
Q Consensus 218 ~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-- 293 (325)
. ..+...+++|+++|+++.+|..... ...+.. .+..+++.+.+... . .. .+.+..+.+++.++.++
T Consensus 240 ~~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~--~---~~----~~~~~~~~~~l~~~~l~~~ 309 (340)
T TIGR00692 240 APKALEQGLQAVTPGGRVSLLGLPPGK-VTIDFTNKVIFKGLTIYGITG--R---HM----FETWYTVSRLIQSGKLDLD 309 (340)
T ss_pred CHHHHHHHHHhhcCCCEEEEEccCCCC-cccchhhhhhhcceEEEEEec--C---Cc----hhhHHHHHHHHHcCCCChH
Confidence 5 4568889999999999999875322 222232 44556666665431 1 11 12334588899999986
Q ss_pred cccccccchhhHHHHHHHHHhCCCceeEEEeC
Q 020487 294 PVIYKYLPLCEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 294 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.+.+.+++++++++++.+.+++ .||+|++.
T Consensus 310 ~~~~~~~~l~~~~~a~~~~~~~~-~gkvvv~~ 340 (340)
T TIGR00692 310 PIITHKFKFDKFEKGFELMRSGQ-TGKVILSL 340 (340)
T ss_pred HheeeeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence 45689999999999999998776 49999863
No 115
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=100.00 E-value=3e-35 Score=260.25 Aligned_cols=301 Identities=30% Similarity=0.405 Sum_probs=247.9
Q ss_pred EEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 2 KAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 2 ~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
||+++.++|. .+++++.+.|.+.++|++|++.++++|++|+....+..+. ..+|.++|+|++|+|+++|++++.+++
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~-~~~p~~~g~e~~G~v~~~g~~~~~~~~ 77 (330)
T cd08245 1 KAAVVHAAGG--PLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGG-SKYPLVPGHEIVGEVVEVGAGVEGRKV 77 (330)
T ss_pred CeEEEecCCC--CceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCC-CCCCcccCccceEEEEEECCCCccccc
Confidence 6888888754 3899999999999999999999999999999999887643 235778999999999999999999999
Q ss_pred CCEEEE----------------------------EcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHh
Q 020487 82 GDQVCA----------------------------LLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFM 133 (325)
Q Consensus 82 Gd~V~~----------------------------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~ 133 (325)
||+|+. +...|+|++|+.++.+.++++|+++++.+++.+...+.+||.++..
T Consensus 78 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~ 157 (330)
T cd08245 78 GDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD 157 (330)
T ss_pred CCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence 999973 2235889999999999999999999999999999999999999854
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
.+++++++++|+|+ |.+|++++++|+..|++|+++++++++.+.++++|++.+++......... .. +++|+++
T Consensus 158 -~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----~~-~~~d~vi 230 (330)
T cd08245 158 -AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELARKLGADEVVDSGAELDEQA----AA-GGADVIL 230 (330)
T ss_pred -hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHh----cc-CCCCEEE
Confidence 78999999999986 77999999999999999999999999999998899888877655443222 22 4799999
Q ss_pred eCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCcc
Q 020487 214 DCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKV 292 (325)
Q Consensus 214 ~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l 292 (325)
+|++. .....++++++++|+++.+|.........+..++..++.++.+...... ..++.+++++.++.+
T Consensus 231 ~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ll~~~~l 300 (330)
T cd08245 231 VTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGR----------ADLQEALDFAAEGKV 300 (330)
T ss_pred ECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCH----------HHHHHHHHHHHcCCC
Confidence 99774 5568889999999999999865433222234456667777777654321 234447788889988
Q ss_pred ccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 293 KPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 293 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
.+ ....+++++++++++.+.+++..+|+|+
T Consensus 301 ~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 301 KP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred cc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 75 4578999999999999999888888874
No 116
>PLN02702 L-idonate 5-dehydrogenase
Probab=100.00 E-value=8.7e-35 Score=260.52 Aligned_cols=297 Identities=24% Similarity=0.337 Sum_probs=234.8
Q ss_pred ceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEE---
Q 020487 14 VLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCAL--- 88 (325)
Q Consensus 14 ~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~--- 88 (325)
.+++++.+.|.|.++||+||+.++++|++|++.+.+.... ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus 28 ~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~ 107 (364)
T PLN02702 28 TLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGI 107 (364)
T ss_pred ceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCC
Confidence 3888888888899999999999999999999988763211 11236789999999999999999999999999862
Q ss_pred ----------------------c---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEE
Q 020487 89 ----------------------L---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESF 143 (325)
Q Consensus 89 ----------------------~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~v 143 (325)
. .+|+|++|+.++.+.++++|+++++.+++. ..++.+++.++ ...++.+++++
T Consensus 108 ~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~-~~~~~~a~~~~-~~~~~~~g~~v 185 (364)
T PLN02702 108 SCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAM-CEPLSVGVHAC-RRANIGPETNV 185 (364)
T ss_pred CCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhh-hhHHHHHHHHH-HhcCCCCCCEE
Confidence 1 148999999999999999999999988874 23455688877 77889999999
Q ss_pred EEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcCCCEEEeCC--CchHHHHHHHH--hCCCcccEEEeCCC-
Q 020487 144 LVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLGADVCINYK--TEDFVARVKEE--TGGKGVDVILDCMG- 217 (325)
Q Consensus 144 li~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~~--~~~~~~d~vi~~~g- 217 (325)
+|+|+ |.+|++++++++..|++ ++++++++++.+.++++|++.+++.+ ...+.+.+.+. ..++++|++|||+|
T Consensus 186 lI~g~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~ 264 (364)
T PLN02702 186 LVMGA-GPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGF 264 (364)
T ss_pred EEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCC
Confidence 99985 99999999999999995 77777788888888999998876543 34455555543 23447999999999
Q ss_pred hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccc--cc
Q 020487 218 ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVK--PV 295 (325)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~--~~ 295 (325)
...+..++++++++|+++.+|.... ...........+++++.++.... ..++.+++++.++.+. +.
T Consensus 265 ~~~~~~~~~~l~~~G~~v~~g~~~~-~~~~~~~~~~~~~~~i~~~~~~~-----------~~~~~~~~~~~~~~l~~~~~ 332 (364)
T PLN02702 265 NKTMSTALEATRAGGKVCLVGMGHN-EMTVPLTPAAAREVDVVGVFRYR-----------NTWPLCLEFLRSGKIDVKPL 332 (364)
T ss_pred HHHHHHHHHHHhcCCEEEEEccCCC-CCcccHHHHHhCccEEEEeccCh-----------HHHHHHHHHHHcCCCCchHh
Confidence 4667899999999999999986543 23345556677888888764321 1234478889999875 44
Q ss_pred cccccch--hhHHHHHHHHHhCCCceeEEEeC
Q 020487 296 IYKYLPL--CEAAEAHQLMESSQHIGKIMLVP 325 (325)
Q Consensus 296 ~~~~~~l--~~~~~a~~~~~~~~~~gkvvi~~ 325 (325)
+.+.|++ +++++|++.+.+++..+|+++.+
T Consensus 333 ~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~~ 364 (364)
T PLN02702 333 ITHRFGFSQKEVEEAFETSARGGNAIKVMFNL 364 (364)
T ss_pred eEEEeccChHHHHHHHHHHhcCCCceEEEEeC
Confidence 5677554 89999999999888888999864
No 117
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=100.00 E-value=4.1e-35 Score=256.65 Aligned_cols=304 Identities=35% Similarity=0.581 Sum_probs=252.5
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCC--CCCCCCCCCCCceeEEEEEecCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYP--PPKGASPYPGLECSGTILSVGKNVSR 78 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~--~~~~~p~~~G~e~~G~V~~vG~~~~~ 78 (325)
||++++..++..+.+++++.+.|.++++||+|++.++++|++|+..+.+... ....+|.++|||++|+|+.+|+++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~ 80 (309)
T cd05289 1 MKAVRIHEYGGPEVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTG 80 (309)
T ss_pred CceEEEcccCCccceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCC
Confidence 8999999888766677888888888999999999999999999998877653 11234778999999999999999999
Q ss_pred CCCCCEEEEEc---CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 79 WKVGDQVCALL---GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 79 ~~~Gd~V~~~~---~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
+++||+|+++. ..|+|++|+.++...++++|+++++..++.++..+.+++.++.....+.++++++|+|++|.+|++
T Consensus 81 ~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~ 160 (309)
T cd05289 81 FKVGDEVFGMTPFTRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSF 160 (309)
T ss_pred CCCCCEEEEccCCCCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHH
Confidence 99999999986 258999999999999999999999999999999999999998777778999999999998999999
Q ss_pred HHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEE
Q 020487 156 AIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 156 ~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v 235 (325)
++++++..|++|++++.++ +.+.++++|.+.+++.....+.+ ...++++|++++|+++.....++++++++|+++
T Consensus 161 ~~~~a~~~g~~v~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~----~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v 235 (309)
T cd05289 161 AVQLAKARGARVIATASAA-NADFLRSLGADEVIDYTKGDFER----AAAPGGVDAVLDTVGGETLARSLALVKPGGRLV 235 (309)
T ss_pred HHHHHHHcCCEEEEEecch-hHHHHHHcCCCEEEeCCCCchhh----ccCCCCceEEEECCchHHHHHHHHHHhcCcEEE
Confidence 9999999999999998777 77778888888887766555433 345567999999999988888999999999999
Q ss_pred EEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhC
Q 020487 236 IIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESS 315 (325)
Q Consensus 236 ~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~ 315 (325)
.+|...... . ....+++++....+... ...++.+.+++.++.+.+.+++.|++++++++++.+.++
T Consensus 236 ~~g~~~~~~-~----~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~ 301 (309)
T cd05289 236 SIAGPPPAE-Q----AAKRRGVRAGFVFVEPD---------GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESG 301 (309)
T ss_pred EEcCCCcch-h----hhhhccceEEEEEeccc---------HHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHHHHhC
Confidence 998654311 1 22345555555443211 345555888999999887788999999999999999988
Q ss_pred CCceeEEE
Q 020487 316 QHIGKIML 323 (325)
Q Consensus 316 ~~~gkvvi 323 (325)
+..+|+++
T Consensus 302 ~~~~kvv~ 309 (309)
T cd05289 302 HARGKVVL 309 (309)
T ss_pred CCCCcEeC
Confidence 87788764
No 118
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=100.00 E-value=1.4e-34 Score=253.03 Aligned_cols=275 Identities=36% Similarity=0.554 Sum_probs=229.6
Q ss_pred CEEEEEcCCCCCcceEEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCC
Q 020487 1 MKAIVITQPGSPEVLQLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 1 m~a~~~~~~~~~~~l~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
||+++....+ +..+++++.+.|.+.++||+||+.++++|++|.+...+.... ...|.++|+|++|+|+++|++++.|+
T Consensus 1 ~~~~~~~~~~-~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~-~~~p~~~G~e~~G~V~~vG~~v~~~~ 78 (306)
T cd08258 1 MKALVKTGPG-PGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDP-VETPVVLGHEFSGTIVEVGPDVEGWK 78 (306)
T ss_pred CeeEEEecCC-CCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCc-CCCCeeeccceEEEEEEECCCcCcCC
Confidence 8999987643 355999999999999999999999999999999988887632 12367899999999999999999999
Q ss_pred CCCEEEEEcC----------------------------CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHH
Q 020487 81 VGDQVCALLG----------------------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVF 132 (325)
Q Consensus 81 ~Gd~V~~~~~----------------------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~ 132 (325)
+||+|+++.. .|+|++|++++...++++|+++++++++ +.....++|+++.
T Consensus 79 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~~l~ 157 (306)
T cd08258 79 VGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVHAVA 157 (306)
T ss_pred CCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHHHHH
Confidence 9999998642 4899999999999999999999999887 7778889999988
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe--cChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA--GSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
....++++++++|.| +|.+|.+++++|+..|++|++++ .++++.+.++++|++.+ +....++...+.+..+++++|
T Consensus 158 ~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~l~~~~~~~~vd 235 (306)
T cd08258 158 ERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAKELGADAV-NGGEEDLAELVNEITDGDGAD 235 (306)
T ss_pred HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHhCCccc-CCCcCCHHHHHHHHcCCCCCC
Confidence 888899999999977 59999999999999999988774 34446677788999878 777777888888888777899
Q ss_pred EEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC
Q 020487 211 VILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 211 ~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (325)
+++||+|. ..+...+++|+++|+++.+|........++...++.+++++.|+.+++..+ ++++++++++
T Consensus 236 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~----------~~~~~~~~~~ 305 (306)
T cd08258 236 VVIECSGAVPALEQALELLRKGGRIVQVGIFGPLAASIDVERIIQKELSVIGSRSSTPAS----------WETALRLLAS 305 (306)
T ss_pred EEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCcccCHHHHhhcCcEEEEEecCchHh----------HHHHHHHHhc
Confidence 99999975 566788999999999999988664445567777888999999988754421 2236666665
Q ss_pred C
Q 020487 290 G 290 (325)
Q Consensus 290 g 290 (325)
|
T Consensus 306 ~ 306 (306)
T cd08258 306 G 306 (306)
T ss_pred C
Confidence 4
No 119
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=100.00 E-value=1.4e-33 Score=248.26 Aligned_cols=305 Identities=34% Similarity=0.501 Sum_probs=237.9
Q ss_pred EcCCCCCcce--EEEeecCCCCCCCeEEEEEeeeecChhhhhhhhCCCCC--CCCCCCCCCCceeEEEEEecCCCCCCCC
Q 020487 6 ITQPGSPEVL--QLQEVEDPQIKDDEVLIKVEATALNRADTLQRKGSYPP--PKGASPYPGLECSGTILSVGKNVSRWKV 81 (325)
Q Consensus 6 ~~~~~~~~~l--~~~~~~~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~--~~~~p~~~G~e~~G~V~~vG~~~~~~~~ 81 (325)
.+..++++++ ++++.+.|+|+++||+|++.++++|++|++.+.|..+. ....|..+|||++|+|+++|+++..+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~ 82 (319)
T cd08267 3 YTRYGSPEVLLLLEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKV 82 (319)
T ss_pred eCCCCChhhhhhccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCC
Confidence 3445555554 78888999999999999999999999999998876532 1123567899999999999999999999
Q ss_pred CCEEEEEcC---CceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHH
Q 020487 82 GDQVCALLG---GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQ 158 (325)
Q Consensus 82 Gd~V~~~~~---~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~ 158 (325)
||+|+.+.. .|+|++|+.++.+.++++|+++++.+++.++.++.+||+++....+++++++++|+|++|.+|+++++
T Consensus 83 Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~ 162 (319)
T cd08267 83 GDEVFGRLPPKGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQ 162 (319)
T ss_pred CCEEEEeccCCCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 999998863 58999999999999999999999999999999999999998777779999999999999999999999
Q ss_pred HHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--HHHHhhccccCCCEEEE
Q 020487 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS--YFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~--~~~~~~~~l~~~g~~v~ 236 (325)
+++..|++|++++.+ ++.+.++++|.+.+++.....+. ...+.++++|++++|.++. .....+..++++|+++.
T Consensus 163 la~~~g~~v~~~~~~-~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~ 238 (319)
T cd08267 163 IAKALGAHVTGVCST-RNAELVRSLGADEVIDYTTEDFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVS 238 (319)
T ss_pred HHHHcCCEEEEEeCH-HHHHHHHHcCCCEeecCCCCCcc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEE
Confidence 999999999998865 77788888998888876654443 4445566899999999853 23333445999999999
Q ss_pred EeccCCcccccc---hHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHH
Q 020487 237 IGTQGGAKTELN---ITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLME 313 (325)
Q Consensus 237 ~g~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~ 313 (325)
+|.......... ..........+....... . .+.++.+.+++.++.+.+.+++.|++++++++++.+.
T Consensus 239 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~----~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~ 309 (319)
T cd08267 239 VGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP-----N----AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLK 309 (319)
T ss_pred eccccccccccccccchhhccccceEEEEEecC-----C----HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHh
Confidence 986543221111 001111112222221111 1 3345558889999998888889999999999999999
Q ss_pred hCCCceeEEE
Q 020487 314 SSQHIGKIML 323 (325)
Q Consensus 314 ~~~~~gkvvi 323 (325)
+++..+|+++
T Consensus 310 ~~~~~~~vvv 319 (319)
T cd08267 310 SGRARGKVVI 319 (319)
T ss_pred cCCCCCcEeC
Confidence 8887788764
No 120
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=100.00 E-value=2.8e-33 Score=242.77 Aligned_cols=290 Identities=32% Similarity=0.542 Sum_probs=241.9
Q ss_pred CeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceee
Q 020487 28 DEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLP 107 (325)
Q Consensus 28 ~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ 107 (325)
+||+||+.++++|++|++...|..+ .+|.++|||++|+|+++|+++..+++||+|+++. .|+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~~---~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLLP---GDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-PGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCCC---CCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-cCcccceEEechhheEe
Confidence 5899999999999999999887653 2467899999999999999999999999999986 48899999999999999
Q ss_pred CCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC--C
Q 020487 108 VPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG--A 185 (325)
Q Consensus 108 ~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g--~ 185 (325)
+|+++++.+++.++.+..+++.++.+...+++|++++|+|++|.+|++++++++..|++++++++++++.+.+++.+ +
T Consensus 77 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~ 156 (293)
T cd05195 77 IPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPV 156 (293)
T ss_pred CCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCc
Confidence 99999999999999999999999878788999999999998899999999999999999999999989998888887 6
Q ss_pred CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCcc-cccchHHHHhhccEeeeccc
Q 020487 186 DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAK-TELNITSLFAKRLTVQAAGL 264 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~-~~~~~~~~~~~~~~i~~~~~ 264 (325)
+.+++.....+...+.+.+.++++|++++|+|+..+...+++++++|+++.+|...... ....... +.+++.+....+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~ 235 (293)
T cd05195 157 DHIFSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDL 235 (293)
T ss_pred ceEeecCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEEeH
Confidence 77887777677778888887778999999999988889999999999999998655321 1222222 335566665544
Q ss_pred ccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 265 RSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
..... .......+.+..+.+++.++.+++..+..+++++++++++.+.+++..+|+++
T Consensus 236 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 236 DQLAR-ERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred HHHhh-hChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 33211 11123345667788999999998878888999999999999998888788764
No 121
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=100.00 E-value=8.3e-33 Score=239.46 Aligned_cols=284 Identities=32% Similarity=0.547 Sum_probs=236.0
Q ss_pred EEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCC
Q 020487 32 IKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSG 111 (325)
Q Consensus 32 v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (325)
||+.++++|++|++...|.++. |.++|+|++|+|+++|++++.+++||+|++++. |+|++|+.++.+.++++|++
T Consensus 2 i~v~~~~i~~~d~~~~~g~~~~----~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~-g~~~~~~~~~~~~~~~~p~~ 76 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLLPG----EAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAP-GSFATYVRTDARLVVPIPDG 76 (288)
T ss_pred eeEEEEecCHHHHHHhcCCCCC----CCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcC-CceeeEEEccHHHeEECCCC
Confidence 7899999999999998886642 568999999999999999999999999999864 88999999999999999999
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC--CEEE
Q 020487 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVCI 189 (325)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~~ 189 (325)
+++.+++.+.....+++.++.+...+.+|++++|+|++|.+|++++++++..|++|+++++++++.+.++++|+ +.++
T Consensus 77 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 156 (288)
T smart00829 77 LSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIF 156 (288)
T ss_pred CCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhhee
Confidence 99999999999999999998778889999999999988999999999999999999999999999999999998 6778
Q ss_pred eCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccCCc-ccccchHHHHhhccEeeeccccccc
Q 020487 190 NYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGGA-KTELNITSLFAKRLTVQAAGLRSRS 268 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-~~~~~~~~~~~~~~~i~~~~~~~~~ 268 (325)
+.....+.+.+.+.++++++|+++|++++..+...+++++++|+++.+|..... ....+... +.+++++.+..+....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 235 (288)
T smart00829 157 SSRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALE 235 (288)
T ss_pred eCCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhh
Confidence 777767777777777777899999999987788889999999999999865421 12233333 3456666665443221
Q ss_pred chhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 269 TENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
. .+....+.++.+.+++.++.+.+...+.|++++++++++.+..++..+|+++
T Consensus 236 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 236 E--GPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred c--ChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 1 1112334556688889999887766788999999999999998877778764
No 122
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=100.00 E-value=1.2e-32 Score=237.76 Aligned_cols=232 Identities=22% Similarity=0.320 Sum_probs=190.5
Q ss_pred CCCCceeEEEEEecCCCC------CCCCCCEEEEEc----------------------------------CCceeeeEEe
Q 020487 60 YPGLECSGTILSVGKNVS------RWKVGDQVCALL----------------------------------GGGGYAEKVA 99 (325)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~------~~~~Gd~V~~~~----------------------------------~~g~~~~~~~ 99 (325)
++|||++|+|+++|++++ .+++||||+... .+|+|+||++
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999998 899999996421 1489999999
Q ss_pred ecCC-ceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhH
Q 020487 100 VPAG-QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKL 177 (325)
Q Consensus 100 ~~~~-~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~ 177 (325)
+++. .++++|+++++++++.+++...++|+++. .....++++|+|+|+ |++|++++|+|+.+|++ |++++++++++
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~ 158 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALE-AAGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPSPDRR 158 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHH-hccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHH
Confidence 9997 79999999999999999999999999884 445669999999997 99999999999999996 88888899999
Q ss_pred HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEEEeccCC-cccccchHHHHhh
Q 020487 178 AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFIIGTQGG-AKTELNITSLFAK 255 (325)
Q Consensus 178 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~g~~~~-~~~~~~~~~~~~~ 255 (325)
+.++++|++.+++... ..+.+.+.+.+.++|++|||+|.. .+..++++++++|+++.+|.... ...+++...++.+
T Consensus 159 ~~a~~~Ga~~~i~~~~--~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~ 236 (280)
T TIGR03366 159 ELALSFGATALAEPEV--LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRR 236 (280)
T ss_pred HHHHHcCCcEecCchh--hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhC
Confidence 9999999998887543 244566667777899999999865 46888999999999999997543 3346677788889
Q ss_pred ccEeeecccccccchhHHHHHHHHHHHHHHHHHCC--c--cccccccccchhhH
Q 020487 256 RLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVG--K--VKPVIYKYLPLCEA 305 (325)
Q Consensus 256 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--l~~~~~~~~~l~~~ 305 (325)
++++.++..... +.++++++++.++ + ++.+++++|+|+|+
T Consensus 237 ~~~i~g~~~~~~----------~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 237 WLTIRGVHNYEP----------RHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred CcEEEecCCCCH----------HHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 999999754321 1234477888764 3 44678999999874
No 123
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=100.00 E-value=5.9e-31 Score=226.09 Aligned_cols=237 Identities=39% Similarity=0.645 Sum_probs=203.8
Q ss_pred eEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEc-------------------
Q 020487 29 EVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL------------------- 89 (325)
Q Consensus 29 ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~------------------- 89 (325)
||+|++.++++|++|+..+.|..+.....|.++|+|++|+|+++|++++.|++||+|+++.
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 80 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGI 80 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCE
Confidence 6899999999999999999887652334477899999999999999999999999999875
Q ss_pred ----CCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC
Q 020487 90 ----GGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV 165 (325)
Q Consensus 90 ----~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~ 165 (325)
..|+|++|+.++.+.++++|+++++++++.++.++.+||.++.....+.++++++|+|+++ +|++++++++..|.
T Consensus 81 ~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~~~g~ 159 (271)
T cd05188 81 LGEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159 (271)
T ss_pred eccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHHHcCC
Confidence 2589999999999999999999999999999999999999997777779999999999966 99999999999999
Q ss_pred EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh-HHHHHhhccccCCCEEEEEeccCCcc
Q 020487 166 RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA-SYFQRNLGSLNIDGRLFIIGTQGGAK 244 (325)
Q Consensus 166 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~ 244 (325)
+|+++++++++.+.++++|++.+++.........+. ...++++|++++|++. ......+++++++|+++.+|......
T Consensus 160 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~ 238 (271)
T cd05188 160 RVIVTDRSDEKLELAKELGADHVIDYKEEDLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGP 238 (271)
T ss_pred eEEEEcCCHHHHHHHHHhCCceeccCCcCCHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCC
Confidence 999999999999999999988888877766666665 5666789999999998 67788899999999999998766433
Q ss_pred cccchHHHHhhccEeeecccccc
Q 020487 245 TELNITSLFAKRLTVQAAGLRSR 267 (325)
Q Consensus 245 ~~~~~~~~~~~~~~i~~~~~~~~ 267 (325)
........+.+++++.++.....
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~ 261 (271)
T cd05188 239 PLDDLRRLLFKELTIIGSTGGTR 261 (271)
T ss_pred CcccHHHHHhcceEEEEeecCCH
Confidence 22334556778999988866543
No 124
>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]
Probab=100.00 E-value=2e-30 Score=211.79 Aligned_cols=302 Identities=20% Similarity=0.270 Sum_probs=238.1
Q ss_pred cceEEEeec---CCCCCCCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCC----ceeEEEEEecCCCCCCCCCCEE
Q 020487 13 EVLQLQEVE---DPQIKDDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGL----ECSGTILSVGKNVSRWKVGDQV 85 (325)
Q Consensus 13 ~~l~~~~~~---~~~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~----e~~G~V~~vG~~~~~~~~Gd~V 85 (325)
+++.++... ..++.+++|+||.+|-+..|.-...+.-..+..-..|+.||- .++|+|++ +..+.+++||.|
T Consensus 20 ~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~kVi~--S~~~~~~~GD~v 97 (343)
T KOG1196|consen 20 SDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVAKVID--SGHPNYKKGDLV 97 (343)
T ss_pred ccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceEEEEe--cCCCCCCcCceE
Confidence 345544333 344689999999999999887665554433332112333332 67899998 566789999999
Q ss_pred EEEcCCceeeeEEeecCCc--eeeC--CCCCCHHhh-ccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 86 CALLGGGGYAEKVAVPAGQ--VLPV--PSGVSLKDA-AAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 86 ~~~~~~g~~~~~~~~~~~~--~~~~--p~~~~~~~a-a~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
+++. +|.+|.+++++. .+++ |.+.++... ..+.++..|||.++.+....++|++++|-||+|++|..+.|+|
T Consensus 98 ~g~~---gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaAsGAvGql~GQ~A 174 (343)
T KOG1196|consen 98 WGIV---GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFA 174 (343)
T ss_pred EEec---cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeeccchhHHHHHHHH
Confidence 9995 699999997753 3443 345555543 3688999999999999999999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEec
Q 020487 161 KCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
+.+|++|+.++-++++...++ ++|.+..+|+.++.......+....+++|+.||.+|+..+...+..|+..||++.+|.
T Consensus 175 k~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~nM~~~gri~~CG~ 254 (343)
T KOG1196|consen 175 KLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLLNMNLHGRIAVCGM 254 (343)
T ss_pred HhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHHhhhhccceEeeee
Confidence 999999999999999999887 6899999999988444444445666799999999999999999999999999999998
Q ss_pred cCCcccc-----cchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHh
Q 020487 240 QGGAKTE-----LNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMES 314 (325)
Q Consensus 240 ~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~ 314 (325)
......+ .+....+.|++++.++......+ .+...++++..++++|++.-.-+..-.|+..+.||.-|.+
T Consensus 255 ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d-----~~~k~ld~l~~~ikegKI~y~edi~~Glen~P~A~vglf~ 329 (343)
T KOG1196|consen 255 ISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLD-----KYPKFLDFLLPYIKEGKITYVEDIADGLENGPSALVGLFH 329 (343)
T ss_pred ehhccccCCccccchhhheeeeEEeeeEEeechhh-----hhHHHHHHHHHHHhcCceEEehhHHHHHhccHHHHHHHhc
Confidence 7743222 23456677899999976544432 2356677799999999998877777789999999999999
Q ss_pred CCCceeEEEe
Q 020487 315 SQHIGKIMLV 324 (325)
Q Consensus 315 ~~~~gkvvi~ 324 (325)
+++.||-++.
T Consensus 330 GkNvGKqiv~ 339 (343)
T KOG1196|consen 330 GKNVGKQLVK 339 (343)
T ss_pred cCcccceEEE
Confidence 9999998775
No 125
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=99.97 E-value=1.1e-30 Score=243.70 Aligned_cols=300 Identities=26% Similarity=0.355 Sum_probs=255.2
Q ss_pred CCCcceEEEeecCC---CCCCCeEEEEEeeeecChhhhhhhhCCCCCCC------CCCCCCCCceeEEEEEecCCCCCCC
Q 020487 10 GSPEVLQLQEVEDP---QIKDDEVLIKVEATALNRADTLQRKGSYPPPK------GASPYPGLECSGTILSVGKNVSRWK 80 (325)
Q Consensus 10 ~~~~~l~~~~~~~~---~~~~~ev~v~v~~~~i~~~D~~~~~g~~~~~~------~~p~~~G~e~~G~V~~vG~~~~~~~ 80 (325)
|+...+++.+.|.. +..++.=+..|.|++||-.|++...|+.+.+. .....+|-||+|+ .+
T Consensus 1424 GDlsSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~ 1493 (2376)
T KOG1202|consen 1424 GDLSSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DA 1493 (2376)
T ss_pred ccccceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cC
Confidence 45566888777754 23677778999999999999999999886532 1245678888886 57
Q ss_pred CCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHH
Q 020487 81 VGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMG 160 (325)
Q Consensus 81 ~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a 160 (325)
-|.||+++..-.++++.+.++.+.+|.+|++..+++|++.|+.+.|+|+||..+...++|++|||++++|++|.+++.+|
T Consensus 1494 ~GrRvM~mvpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiA 1573 (2376)
T KOG1202|consen 1494 SGRRVMGMVPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIA 1573 (2376)
T ss_pred CCcEEEEeeehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHH
Confidence 79999999988899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEE
Q 020487 161 KCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 161 ~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~ 236 (325)
..+|++|+-++.++++++++++ +...++-|+.+.+|...+...++++|+|+|++....+.++..++||.-+|||..
T Consensus 1574 La~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLE 1653 (2376)
T KOG1202|consen 1574 LAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLE 1653 (2376)
T ss_pred HHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeee
Confidence 9999999999999999998874 456677788899999999999999999999999999999999999999999999
Q ss_pred EeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHHHHHHHHHHC----CccccccccccchhhHHHHHHHH
Q 020487 237 IGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVEKNVWPAIAV----GKVKPVIYKYLPLCEAAEAHQLM 312 (325)
Q Consensus 237 ~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----g~l~~~~~~~~~l~~~~~a~~~~ 312 (325)
+|--.-+.-.......+.+|.+++|..+.+....+ . +++.+++.++.+ |...|+.+++|+-+++++||++|
T Consensus 1654 IGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege-~----e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfM 1728 (2376)
T KOG1202|consen 1654 IGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGE-E----EMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFM 1728 (2376)
T ss_pred ecceecccCCcchhhhhhcccceeeeehhhhhcCc-H----HHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHH
Confidence 98644332233345567799999999888765422 2 233335555555 55888999999999999999999
Q ss_pred HhCCCceeEEEe
Q 020487 313 ESSQHIGKIMLV 324 (325)
Q Consensus 313 ~~~~~~gkvvi~ 324 (325)
.+++.+||+|+.
T Consensus 1729 asGKHIGKVvik 1740 (2376)
T KOG1202|consen 1729 ASGKHIGKVVIK 1740 (2376)
T ss_pred hccCccceEEEE
Confidence 999999999985
No 126
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.97 E-value=1.8e-28 Score=211.70 Aligned_cols=251 Identities=27% Similarity=0.401 Sum_probs=198.7
Q ss_pred CCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcC
Q 020487 57 ASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSH 136 (325)
Q Consensus 57 ~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~ 136 (325)
+|.++|||++|+|+++|++++.+++||+|+++ +.|++|+.++.+.++++|++++..+++.+ ..+++||+++ ...+
T Consensus 20 ~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~---~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~-~~~~ 94 (277)
T cd08255 20 LPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF---GPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGV-RDAE 94 (277)
T ss_pred CCcccCcceeEEEEEeCCCCCCCCCCCEEEec---CCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHH-HhcC
Confidence 57899999999999999999999999999998 46999999999999999999999998888 7899999997 4788
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHHHHHHcC-CCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLAVCKDLG-ADVCINYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
++++++++|+|+ |.+|++++++|+.+|++ |+++++++++.+.++++| ++.+++... ..+.++++|++|+
T Consensus 95 ~~~g~~vlI~g~-g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~--------~~~~~~~~d~vl~ 165 (277)
T cd08255 95 PRLGERVAVVGL-GLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTA--------DEIGGRGADVVIE 165 (277)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccch--------hhhcCCCCCEEEE
Confidence 999999999985 99999999999999998 999999999999888888 455543322 1224557999999
Q ss_pred CCCh-HHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhH-H-HHHHHHHHHHHHHHHCCc
Q 020487 215 CMGA-SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENK-A-LIVSEVEKNVWPAIAVGK 291 (325)
Q Consensus 215 ~~g~-~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~ 291 (325)
|++. ..+...+++++++|+++.+|..... .......+..+++++.+..+........ . ....+.++++.+++.++.
T Consensus 166 ~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 244 (277)
T cd08255 166 ASGSPSALETALRLLRDRGRVVLVGWYGLK-PLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGR 244 (277)
T ss_pred ccCChHHHHHHHHHhcCCcEEEEEeccCCC-ccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCC
Confidence 9875 5568889999999999999876543 2222233444666777766543321110 0 112345566889999999
Q ss_pred cccccccccchhhHHHHHHHHHhC-CCceeEE
Q 020487 292 VKPVIYKYLPLCEAAEAHQLMESS-QHIGKIM 322 (325)
Q Consensus 292 l~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvv 322 (325)
+++.+.+.|+++++++|++.+.++ ....|++
T Consensus 245 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~ 276 (277)
T cd08255 245 LEALITHRVPFEDAPEAYRLLFEDPPECLKVV 276 (277)
T ss_pred ccccccCccCHHHHHHHHHHHHcCCccceeee
Confidence 888788999999999999999877 3345665
No 127
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.74 E-value=7.6e-18 Score=123.95 Aligned_cols=82 Identities=40% Similarity=0.618 Sum_probs=69.8
Q ss_pred CCeEEEEEeeeecChhhhhhhhCCCCCCCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEc-----------------
Q 020487 27 DDEVLIKVEATALNRADTLQRKGSYPPPKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALL----------------- 89 (325)
Q Consensus 27 ~~ev~v~v~~~~i~~~D~~~~~g~~~~~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~----------------- 89 (325)
|+||+||+.++|||++|++.+.|.......+|.++|||++|+|+++|+++++|++||+|+...
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~~~ 80 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRPNL 80 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTGGG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCCcccc
Confidence 689999999999999999999996544556799999999999999999999999999998632
Q ss_pred ----------CCceeeeEEeecCCceeeC
Q 020487 90 ----------GGGGYAEKVAVPAGQVLPV 108 (325)
Q Consensus 90 ----------~~g~~~~~~~~~~~~~~~~ 108 (325)
.+|+|++|+++++++++++
T Consensus 81 c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 81 CPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp TTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred CCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 2589999999999998874
No 128
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.74 E-value=5.9e-17 Score=123.41 Aligned_cols=116 Identities=41% Similarity=0.738 Sum_probs=108.1
Q ss_pred hHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-hHHHHHhhcccc
Q 020487 151 GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG-ASYFQRNLGSLN 229 (325)
Q Consensus 151 ~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g-~~~~~~~~~~l~ 229 (325)
++|++++|+|+..|++|+++++++++++.++++|++++++++..++.+.+++.+++.++|++|||+| ...+..++++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~ 80 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAKELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLLR 80 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHEE
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHHhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999999999889999999999 677899999999
Q ss_pred CCCEEEEEeccCCcccccchHHHHhhccEeeeccccc
Q 020487 230 IDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRS 266 (325)
Q Consensus 230 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 266 (325)
++|+++.+|........++...++.+++++.++....
T Consensus 81 ~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~ 117 (130)
T PF00107_consen 81 PGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGS 117 (130)
T ss_dssp EEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGG
T ss_pred cCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCC
Confidence 9999999999886667888999999999999997765
No 129
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=99.56 E-value=1.5e-14 Score=109.59 Aligned_cols=124 Identities=35% Similarity=0.498 Sum_probs=82.0
Q ss_pred cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC--hHHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEe
Q 020487 183 LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG--ASYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTV 259 (325)
Q Consensus 183 ~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i 259 (325)
||+++++|++..++ .+.+++|+||||+| .+.+ ..++++| ++|+++.++. .........+...+
T Consensus 1 LGAd~vidy~~~~~-------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~------~~~~~~~~~~~~~~ 66 (127)
T PF13602_consen 1 LGADEVIDYRDTDF-------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG------DLPSFARRLKGRSI 66 (127)
T ss_dssp CT-SEEEETTCSHH-------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S------HHHHHHHHHHCHHC
T ss_pred CCcCEEecCCCccc-------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC------cccchhhhhcccce
Confidence 68999999997665 55568999999999 6665 6777888 9999999974 11111111223333
Q ss_pred eecccccccchhHHHHHHHHHHHHHHHHHCCccccccccccchhhHHHHHHHHHhCCCceeEEE
Q 020487 260 QAAGLRSRSTENKALIVSEVEKNVWPAIAVGKVKPVIYKYLPLCEAAEAHQLMESSQHIGKIML 323 (325)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi 323 (325)
....+...... ...++.++++.+++.+|++++.+.++||++++++|++.+++++..||+|+
T Consensus 67 ~~~~~~~~~~~---~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 67 RYSFLFSVDPN---AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp EEECCC-H--H---HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred EEEEEEecCCC---chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 33333221110 22345577799999999999999999999999999999999999999986
No 130
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=99.40 E-value=3.4e-11 Score=107.41 Aligned_cols=174 Identities=15% Similarity=0.136 Sum_probs=129.9
Q ss_pred HHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 128 ~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
+.++.+..+ .-+|++|+|.|+ |.+|+.+++.++.+|++|++++.++.+.+.++.+|++.+ + . .+..
T Consensus 189 ~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~-~-----~----~e~v-- 255 (413)
T cd00401 189 IDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVM-T-----M----EEAV-- 255 (413)
T ss_pred HHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEc-c-----H----HHHH--
Confidence 344444433 368999999998 999999999999999999999999999999999998433 1 1 1222
Q ss_pred CcccEEEeCCChHH-HHH-hhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccc-hhHHHHHHHHHHHH
Q 020487 207 KGVDVILDCMGASY-FQR-NLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRST-ENKALIVSEVEKNV 283 (325)
Q Consensus 207 ~~~d~vi~~~g~~~-~~~-~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~ 283 (325)
+++|++|+|+|... +.. .++.++++|.++.+|.. ...++...+..+++++.++....... .+. ...
T Consensus 256 ~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~---~~eId~~~L~~~el~i~g~~~~~~~~~~~~--------g~a 324 (413)
T cd00401 256 KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF---DVEIDVKGLKENAVEVVNIKPQVDRYELPD--------GRR 324 (413)
T ss_pred cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC---CCccCHHHHHhhccEEEEccCCcceEEcCC--------cch
Confidence 25899999999765 444 48999999999999853 34677888888889888876543211 110 027
Q ss_pred HHHHHCCcc---ccccccc-----cchh-hHHHHHHHHHhCCCc-eeEEEeC
Q 020487 284 WPAIAVGKV---KPVIYKY-----LPLC-EAAEAHQLMESSQHI-GKIMLVP 325 (325)
Q Consensus 284 ~~~~~~g~l---~~~~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvi~~ 325 (325)
++++.+|.+ ...+++. ++++ ++.++++.+.+++.. .|+++.|
T Consensus 325 I~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p 376 (413)
T cd00401 325 IILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP 376 (413)
T ss_pred hhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence 889999987 4456777 8899 999999999876543 5777765
No 131
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=99.34 E-value=2.1e-11 Score=111.41 Aligned_cols=126 Identities=17% Similarity=0.202 Sum_probs=95.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCc-------------hHHHHHHH
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTE-------------DFVARVKE 202 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~-------------~~~~~~~~ 202 (325)
..++++|+|+|+ |.+|+++++.|+.+|++|++++.++++++.++++|++.+ ++..+. .+.+...+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 457999999999 999999999999999999999999999999999999854 443221 12222222
Q ss_pred HhCC--CcccEEEeCCChH------H-HHHhhccccCCCEEEEEeccCCcc--cccchHHHHh-hccEeeecc
Q 020487 203 ETGG--KGVDVILDCMGAS------Y-FQRNLGSLNIDGRLFIIGTQGGAK--TELNITSLFA-KRLTVQAAG 263 (325)
Q Consensus 203 ~~~~--~~~d~vi~~~g~~------~-~~~~~~~l~~~g~~v~~g~~~~~~--~~~~~~~~~~-~~~~i~~~~ 263 (325)
.+.+ +++|++|+|++.+ . +..+++.++++|+++++|...+.. .+.+..+++. +++++.|..
T Consensus 241 ~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~ 313 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYT 313 (509)
T ss_pred HHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeC
Confidence 2221 4799999999852 3 488999999999999998753332 3344445554 789998875
No 132
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=98.70 E-value=4.9e-07 Score=82.89 Aligned_cols=149 Identities=20% Similarity=0.262 Sum_probs=97.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE-eCCC-------------chHHHHHHHH
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI-NYKT-------------EDFVARVKEE 203 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~-~~~~-------------~~~~~~~~~~ 203 (325)
.++++++|+|+ |.+|+++++.++.+|++|++++.+.++++.++.+|++.+. +..+ ..+.+...+.
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~ 240 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL 240 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence 46789999998 9999999999999999999999999999999999987633 2211 1222222222
Q ss_pred hC--CCcccEEEeCC---ChH----HHHHhhccccCCCEEEEEeccCCcccccc-hHHHH--hhccEeeecc-cccccch
Q 020487 204 TG--GKGVDVILDCM---GAS----YFQRNLGSLNIDGRLFIIGTQGGAKTELN-ITSLF--AKRLTVQAAG-LRSRSTE 270 (325)
Q Consensus 204 ~~--~~~~d~vi~~~---g~~----~~~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~~~~--~~~~~i~~~~-~~~~~~~ 270 (325)
+. .+++|++|+|+ |.+ .....++.|++|+.+|+++...+...... +.+.+ ..++++.+.. +.+....
T Consensus 241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~E~t~p~~~~~~~~GV~~~gv~nlPs~~p~ 320 (511)
T TIGR00561 241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNCEYTKPGEVYTTENQVKVIGYTDLPSRLPT 320 (511)
T ss_pred HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCEEEecCceEEEecCCEEEEeeCCccccCHH
Confidence 22 24699999999 542 25778999999999999976554322211 12222 1347777663 3444444
Q ss_pred hHHHHHHHHHHHHHHHH
Q 020487 271 NKALIVSEVEKNVWPAI 287 (325)
Q Consensus 271 ~~~~~~~~~~~~~~~~~ 287 (325)
.....+.+.+-..+..+
T Consensus 321 ~AS~l~s~nl~~~l~~l 337 (511)
T TIGR00561 321 QSSQLYGTNLVNLLKLL 337 (511)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 44444555443334333
No 133
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=98.63 E-value=6.8e-06 Score=71.20 Aligned_cols=133 Identities=20% Similarity=0.293 Sum_probs=92.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.+.+++|+|. |.+|..+++.++.+|++|+++.++.++.++++.+|+..+. ...+.+... .+|+||+|++.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~~G~~~~~-------~~~l~~~l~--~aDiVI~t~p~ 220 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITEMGLSPFH-------LSELAEEVG--KIDIIFNTIPA 220 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCeeec-------HHHHHHHhC--CCCEEEECCCh
Confidence 5899999998 9999999999999999999999998888888888865331 123334433 68999999986
Q ss_pred HHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeec-cccccc-chhHHHHHHHHHHHHH
Q 020487 219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAA-GLRSRS-TENKALIVSEVEKNVW 284 (325)
Q Consensus 219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~ 284 (325)
..+ ...++.+++++.+++++...+. ..+ .....++++..+. .+.... .......+.+.+..++
T Consensus 221 ~~i~~~~l~~~~~g~vIIDla~~pgg-td~--~~a~~~Gv~~~~~~~lpg~vap~ta~~~~~~~i~~~l 286 (296)
T PRK08306 221 LVLTKEVLSKMPPEALIIDLASKPGG-TDF--EYAEKRGIKALLAPGLPGKVAPKTAGQILANVLSQLL 286 (296)
T ss_pred hhhhHHHHHcCCCCcEEEEEccCCCC-cCe--eehhhCCeEEEEECCCCccCCHHHHHHHHHHHHHHHH
Confidence 544 5667889999999999766543 222 2334456666643 333332 3344444555444444
No 134
>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed
Probab=98.48 E-value=7.9e-07 Score=76.44 Aligned_cols=167 Identities=17% Similarity=0.176 Sum_probs=98.4
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHH-hCCC
Q 020487 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEE-TGGK 207 (325)
Q Consensus 135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~-~~~~ 207 (325)
+.++++++||.+|+ |. |..+.++++..|. +|++++.+++..+.+++ .+...+.. ... .+.+. ....
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~-~~~----d~~~l~~~~~ 145 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEF-RLG----EIEALPVADN 145 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEE-EEc----chhhCCCCCC
Confidence 46789999999998 65 8888888887764 69999999998887765 33322210 011 11221 1234
Q ss_pred cccEEEeCC------C-hHHHHHhhccccCCCEEEEEeccCCcccccchHHHHhhccEeeecccccccchhHHHHHHHHH
Q 020487 208 GVDVILDCM------G-ASYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQAAGLRSRSTENKALIVSEVE 280 (325)
Q Consensus 208 ~~d~vi~~~------g-~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 280 (325)
.||+|+... . ...+..+.+.|+|||+++..+...... .+ ....+...+.+........ . .+
T Consensus 146 ~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~--~----~e-- 213 (272)
T PRK11873 146 SVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGE--LP--EEIRNDAELYAGCVAGALQ--E----EE-- 213 (272)
T ss_pred ceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCC--CC--HHHHHhHHHHhccccCCCC--H----HH--
Confidence 799998543 1 234788899999999999876544321 11 1122222222111111111 1 11
Q ss_pred HHHHHHHHCCccc---cccccccchhhHHHHHHHH--HhCCCceeEE
Q 020487 281 KNVWPAIAVGKVK---PVIYKYLPLCEAAEAHQLM--ESSQHIGKIM 322 (325)
Q Consensus 281 ~~~~~~~~~g~l~---~~~~~~~~l~~~~~a~~~~--~~~~~~gkvv 322 (325)
..+++.+..+. ......+++++..++++.+ .+++..++.+
T Consensus 214 --~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 258 (272)
T PRK11873 214 --YLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYI 258 (272)
T ss_pred --HHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceE
Confidence 44555553333 3345678899999999988 5555444444
No 135
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=98.29 E-value=2.5e-05 Score=69.89 Aligned_cols=147 Identities=12% Similarity=0.168 Sum_probs=93.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG- 217 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g- 217 (325)
+.+++|+|+ |.+|+.+++.++.+|++|++++++.++.+.+. .++......... ...+.+... .+|++|+|++
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~---~~~l~~~l~--~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSN---AYEIEDAVK--RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCC---HHHHHHHHc--cCCEEEEcccc
Confidence 455999998 99999999999999999999999888877665 445432222221 223344443 6899999973
Q ss_pred --h--HH--HHHhhccccCCCEEEEEeccCCcccccc-hH-----HHHhhccEeeec-ccccccchhHHHHHHH-HHHHH
Q 020487 218 --A--SY--FQRNLGSLNIDGRLFIIGTQGGAKTELN-IT-----SLFAKRLTVQAA-GLRSRSTENKALIVSE-VEKNV 283 (325)
Q Consensus 218 --~--~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~-~~-----~~~~~~~~i~~~-~~~~~~~~~~~~~~~~-~~~~~ 283 (325)
. +. ....++.+++++.++.++...+...... .+ .+...++...+. ++......+....+.+ ++..+
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~~e~~~~t~~d~p~~~~~Gv~~~~v~nlP~~~p~~aS~~~~~~l~~~l 320 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGCVETSRPTTHDQPTYAVHDVVHYCVANMPGAVPKTSTYALTNATMPYV 320 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCCccCCcCCCCCCCEEEECCeEEEEeCCcccccHHHHHHHHHHHHHHHH
Confidence 2 21 3667788999999999876554321111 11 122345666666 5555555555554444 44555
Q ss_pred HHHHHCCcc
Q 020487 284 WPAIAVGKV 292 (325)
Q Consensus 284 ~~~~~~g~l 292 (325)
..+..+|.+
T Consensus 321 ~~~~~~g~~ 329 (370)
T TIGR00518 321 LELANHGWR 329 (370)
T ss_pred HHHHhcccc
Confidence 566666644
No 136
>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function.
Probab=98.25 E-value=0.00021 Score=61.46 Aligned_cols=253 Identities=14% Similarity=0.044 Sum_probs=138.5
Q ss_pred hhCCCCC-CCCCCCCCCCceeEEEEEecCCCCCCCCCCEEEEEcCCc---------------------------eeeeEE
Q 020487 47 RKGSYPP-PKGASPYPGLECSGTILSVGKNVSRWKVGDQVCALLGGG---------------------------GYAEKV 98 (325)
Q Consensus 47 ~~g~~~~-~~~~p~~~G~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~g---------------------------~~~~~~ 98 (325)
+...+|. ...+-.+|--.+ ++|++ |+++++.+|.||+++-.-+ .|.+|.
T Consensus 19 YW~ffP~~~~~wG~vPvWGf-A~Vve--S~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~ 95 (314)
T PF11017_consen 19 YWDFFPASDDGWGIVPVWGF-ATVVE--SRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYL 95 (314)
T ss_pred cceeccCCcccCcccccceE-EEEEe--eCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhcee
Confidence 3344444 233333444434 77777 8999999999999875321 234444
Q ss_pred eecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhc---CCCCCCEEEEEcCCchHHHHHHHHHH-HC-CCEEEEEecC
Q 020487 99 AVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTS---HLSPGESFLVHGGSSGIGTFAIQMGK-CQ-GVRVFVTAGS 173 (325)
Q Consensus 99 ~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~---~~~~~~~vli~g~~g~~G~~~~~~a~-~~-g~~v~~~~~~ 173 (325)
++..+..+. .-....-+.+...+.|.|..- +.. ..-..+.|+|..|++-.++.++..++ .. +.+++.++ |
T Consensus 96 r~~~d~~y~---~~~e~~~~LlrPLf~Tsfll~-d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglT-S 170 (314)
T PF11017_consen 96 RVSADPAYD---PEREDWQMLLRPLFITSFLLD-DFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLT-S 170 (314)
T ss_pred ecCCCcccC---cchhHHHHHHHHHHHHHHHHH-HHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEe-c
Confidence 444333221 112233456777788888642 221 12345788999999999999999998 33 45899988 6
Q ss_pred hhhHHHHHHcCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCC-EEEEEeccCCcccccchH
Q 020487 174 EEKLAVCKDLGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDG-RLFIIGTQGGAKTELNIT 250 (325)
Q Consensus 174 ~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g-~~v~~g~~~~~~~~~~~~ 250 (325)
+......+.+|. +.++.+++- ..... ..--+++|..|+..+ ..+-+.+...- ..+.+|....+.... ..
T Consensus 171 ~~N~~Fve~lg~Yd~V~~Yd~i------~~l~~-~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~~~~~~-~~ 242 (314)
T PF11017_consen 171 ARNVAFVESLGCYDEVLTYDDI------DSLDA-PQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHWDKVEA-PA 242 (314)
T ss_pred CcchhhhhccCCceEEeehhhh------hhccC-CCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCccccCc-cc
Confidence 677778888885 667765542 22211 245789999998654 44445555543 455566544322110 00
Q ss_pred HHHhhccEeeecc----cccccchhHHHHHHHHHHHHHHHHHCCccc-cccccccchhhHHHHHHHHHhCCC
Q 020487 251 SLFAKRLTVQAAG----LRSRSTENKALIVSEVEKNVWPAIAVGKVK-PVIYKYLPLCEAAEAHQLMESSQH 317 (325)
Q Consensus 251 ~~~~~~~~i~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~-~~~~~~~~l~~~~~a~~~~~~~~~ 317 (325)
.+ .+.+-..++ +..+....-...+.+.....+..+.+.... ..+..+-..+.+.++++.+.+++.
T Consensus 243 ~l--~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~~~~~G~ea~~~~y~~l~~G~v 312 (314)
T PF11017_consen 243 DL--PGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKVEEVAGPEAVEAAYQDLLAGKV 312 (314)
T ss_pred cC--CCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEEEEecCHHHHHHHHHHHhcCCC
Confidence 00 000111111 111111111112222222233222222222 235688899999999999988764
No 137
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=98.22 E-value=2.2e-05 Score=70.80 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=76.9
Q ss_pred HHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhC
Q 020487 127 VWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETG 205 (325)
Q Consensus 127 a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 205 (325)
+|.++.+...+. .|++++|+|. |.+|..+++.++.+|++|+++++++.+...+...|+. +.+ . .+..
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~~G~~-v~~-----l----~eal- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAAMDGFR-VMT-----M----EEAA- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHhcCCE-ecC-----H----HHHH-
Confidence 455554443444 7999999998 9999999999999999999999888776666555654 221 1 1222
Q ss_pred CCcccEEEeCCChHH-HH-HhhccccCCCEEEEEeccCC
Q 020487 206 GKGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 206 ~~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~~ 242 (325)
+++|++|+|+|... +. ..+..+++++.++..|....
T Consensus 266 -~~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d~ 303 (425)
T PRK05476 266 -ELGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFDN 303 (425)
T ss_pred -hCCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCCC
Confidence 26899999999765 43 57889999999999886553
No 138
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.08 E-value=2.3e-05 Score=63.00 Aligned_cols=119 Identities=21% Similarity=0.177 Sum_probs=83.2
Q ss_pred CCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH----HHHHHcCCCE
Q 020487 112 VSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL----AVCKDLGADV 187 (325)
Q Consensus 112 ~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~----~~~~~~g~~~ 187 (325)
++....-++..+.+.|.. .+...++++++||-+|+ +.|+.++-+++..| +|+.+.+.++-. ..++.+|...
T Consensus 47 lpi~~gqtis~P~~vA~m--~~~L~~~~g~~VLEIGt--GsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~n 121 (209)
T COG2518 47 LPIGCGQTISAPHMVARM--LQLLELKPGDRVLEIGT--GSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYEN 121 (209)
T ss_pred ccCCCCceecCcHHHHHH--HHHhCCCCCCeEEEECC--CchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCc
Confidence 333344455555566653 36778999999999995 56999999999888 999999888733 3455688754
Q ss_pred EEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEEec
Q 020487 188 CINYKTEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~ 239 (325)
+.....+.. .-+....+||.|+-+.+.+.. ..++++|++||+++.--+
T Consensus 122 V~v~~gDG~----~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~PvG 170 (209)
T COG2518 122 VTVRHGDGS----KGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIPVG 170 (209)
T ss_pred eEEEECCcc----cCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEEEc
Confidence 433222221 112233589999988887765 677899999999987643
No 139
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=98.08 E-value=0.00048 Score=59.42 Aligned_cols=109 Identities=18% Similarity=0.265 Sum_probs=77.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+++|+|. |.+|.++++.++.+|++|++..++.++.+.+.+.+...+ . ...+.+... .+|++++|++.
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~~g~~~~-~------~~~l~~~l~--~aDiVint~P~ 219 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITEMGLIPF-P------LNKLEEKVA--EIDIVINTIPA 219 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeee-c------HHHHHHHhc--cCCEEEECCCh
Confidence 3789999998 999999999999999999999999887777666664322 1 122333333 68999999986
Q ss_pred HHH-HHhhccccCCCEEEEEeccCCcccccchHHHHhhccEee
Q 020487 219 SYF-QRNLGSLNIDGRLFIIGTQGGAKTELNITSLFAKRLTVQ 260 (325)
Q Consensus 219 ~~~-~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~ 260 (325)
..+ ...++.++++..++.++...+ ..++......++...
T Consensus 220 ~ii~~~~l~~~k~~aliIDlas~Pg---~tdf~~Ak~~G~~a~ 259 (287)
T TIGR02853 220 LVLTADVLSKLPKHAVIIDLASKPG---GTDFEYAKKRGIKAL 259 (287)
T ss_pred HHhCHHHHhcCCCCeEEEEeCcCCC---CCCHHHHHHCCCEEE
Confidence 543 456778899888898876443 233333334455544
No 140
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=98.04 E-value=7.8e-05 Score=66.87 Aligned_cols=101 Identities=17% Similarity=0.184 Sum_probs=74.8
Q ss_pred HHHHHhhcC-CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 128 WSTVFMTSH-LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 128 ~~~l~~~~~-~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
+.++.+..+ ...|++++|.|. |.+|..+++.++.+|++|+++..++.+...+...|+. +.+ . . +..
T Consensus 182 ~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~~~G~~-v~~-----l-e---eal-- 248 (406)
T TIGR00936 182 IDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAAMDGFR-VMT-----M-E---EAA-- 248 (406)
T ss_pred HHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHHhcCCE-eCC-----H-H---HHH--
Confidence 344434333 367999999998 9999999999999999999998887776666666663 321 1 1 112
Q ss_pred CcccEEEeCCChHH-HH-HhhccccCCCEEEEEeccC
Q 020487 207 KGVDVILDCMGASY-FQ-RNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 207 ~~~d~vi~~~g~~~-~~-~~~~~l~~~g~~v~~g~~~ 241 (325)
++.|++|++.|... +. ..+..+++++.++..|...
T Consensus 249 ~~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~~ 285 (406)
T TIGR00936 249 KIGDIFITATGNKDVIRGEHFENMKDGAIVANIGHFD 285 (406)
T ss_pred hcCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCCC
Confidence 25799999999866 33 4788999999999987653
No 141
>PLN02494 adenosylhomocysteinase
Probab=98.00 E-value=8.2e-05 Score=67.42 Aligned_cols=101 Identities=15% Similarity=0.151 Sum_probs=76.1
Q ss_pred HHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 128 WSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 128 ~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
+-++.+..++ -.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|+..+ + .. +..
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~~~G~~vv-~-----le----Eal-- 307 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQALMEGYQVL-T-----LE----DVV-- 307 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHHhcCCeec-c-----HH----HHH--
Confidence 3344344333 56999999998 999999999999999999999988777666666676532 1 11 122
Q ss_pred CcccEEEeCCChHH--HHHhhccccCCCEEEEEeccC
Q 020487 207 KGVDVILDCMGASY--FQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 207 ~~~d~vi~~~g~~~--~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+..|++++|.|... ....++.|++++.++.+|...
T Consensus 308 ~~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~~ 344 (477)
T PLN02494 308 SEADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHFD 344 (477)
T ss_pred hhCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCCC
Confidence 15799999999765 377899999999999998743
No 142
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=97.93 E-value=7.2e-05 Score=62.91 Aligned_cols=81 Identities=25% Similarity=0.397 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC----CC-EEE--eCCCchHHHHHHHHhCC--C
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG----AD-VCI--NYKTEDFVARVKEETGG--K 207 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g----~~-~~~--~~~~~~~~~~~~~~~~~--~ 207 (325)
..+.+++|+||++++|...+..+...|++|+.+.|++++++.+. ++. .. .++ |..+......+.+.... .
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~ 83 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG 83 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence 45789999999999999999999999999999999999987765 332 11 233 44444444444443332 3
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|+.++++|.
T Consensus 84 ~IdvLVNNAG~ 94 (265)
T COG0300 84 PIDVLVNNAGF 94 (265)
T ss_pred cccEEEECCCc
Confidence 79999999984
No 143
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed
Probab=97.88 E-value=0.00047 Score=58.44 Aligned_cols=142 Identities=18% Similarity=0.258 Sum_probs=90.7
Q ss_pred CCCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHH
Q 020487 77 SRWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFA 156 (325)
Q Consensus 77 ~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~ 156 (325)
..+++||+++..+ +|.+|.. +...++.+++++++..+. -+.. ..+...+.. .+.++.+||-+|+ |. |..+
T Consensus 65 ~p~~~g~~~~i~p---~~~~~~~-~~~~~i~i~p~~afgtg~-h~tt-~~~l~~l~~--~~~~~~~VLDiGc-Gs-G~l~ 134 (250)
T PRK00517 65 HPIRIGDRLWIVP---SWEDPPD-PDEINIELDPGMAFGTGT-HPTT-RLCLEALEK--LVLPGKTVLDVGC-GS-GILA 134 (250)
T ss_pred CCEEEcCCEEEEC---CCcCCCC-CCeEEEEECCCCccCCCC-CHHH-HHHHHHHHh--hcCCCCEEEEeCC-cH-HHHH
Confidence 3478899888774 3666644 667788888888877654 1111 112222322 2468899999998 54 8777
Q ss_pred HHHHHHCCC-EEEEEecChhhHHHHHHc----CC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH----HHHhhc
Q 020487 157 IQMGKCQGV-RVFVTAGSEEKLAVCKDL----GA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNLG 226 (325)
Q Consensus 157 ~~~a~~~g~-~v~~~~~~~~~~~~~~~~----g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~~ 226 (325)
+.+++ .|+ +|++++.++...+.+++. +. +.+... .+...||+|+.+..... +..+.+
T Consensus 135 i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~------------~~~~~fD~Vvani~~~~~~~l~~~~~~ 201 (250)
T PRK00517 135 IAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLP------------QGDLKADVIVANILANPLLELAPDLAR 201 (250)
T ss_pred HHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEc------------cCCCCcCEEEEcCcHHHHHHHHHHHHH
Confidence 76544 576 699999998887766532 22 111100 01115899998766432 466788
Q ss_pred cccCCCEEEEEeccC
Q 020487 227 SLNIDGRLFIIGTQG 241 (325)
Q Consensus 227 ~l~~~g~~v~~g~~~ 241 (325)
.|++||.++..|...
T Consensus 202 ~LkpgG~lilsgi~~ 216 (250)
T PRK00517 202 LLKPGGRLILSGILE 216 (250)
T ss_pred hcCCCcEEEEEECcH
Confidence 899999999887543
No 144
>PRK08324 short chain dehydrogenase; Validated
Probab=97.87 E-value=0.00011 Score=71.39 Aligned_cols=115 Identities=20% Similarity=0.230 Sum_probs=73.3
Q ss_pred ceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe
Q 020487 92 GGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA 171 (325)
Q Consensus 92 g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~ 171 (325)
-++++|..+++..++.+ +..+.+++..... ......+|++++|+|++|.+|..+++.+...|++|++++
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~~----------~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~ 453 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQRM----------PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVLAD 453 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhcC----------CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEe
Confidence 34677777777777776 5566666541100 012223689999999999999999999999999999999
Q ss_pred cChhhHHHHH-HcCC--C-EE--EeCCCchHHHHHHH-Hh-CCCcccEEEeCCC
Q 020487 172 GSEEKLAVCK-DLGA--D-VC--INYKTEDFVARVKE-ET-GGKGVDVILDCMG 217 (325)
Q Consensus 172 ~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~~~~~~-~~-~~~~~d~vi~~~g 217 (325)
++.++.+.+. .++. . .. .|-.+......+.+ .. ...++|++|+++|
T Consensus 454 r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG 507 (681)
T PRK08324 454 LDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAG 507 (681)
T ss_pred CCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 9988765544 3332 1 12 23333222222222 11 1126999999998
No 145
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.82 E-value=0.00019 Score=58.87 Aligned_cols=78 Identities=27% Similarity=0.456 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--CE--EEeCCCchH-H---HHHHHHhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DV--CINYKTEDF-V---ARVKEETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~~--~~~~~~~~~-~---~~~~~~~~~~~~ 209 (325)
.++.++|+||++++|.++++.+...|++|+.+.|..++++.+. +++. .. .+|-.+... . ..+.+..+ .+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g--~i 82 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFG--RI 82 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhC--cc
Confidence 3578999999999999999999999999999999999998776 5763 22 233333222 2 22223333 69
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++++.|.
T Consensus 83 DiLvNNAGl 91 (246)
T COG4221 83 DILVNNAGL 91 (246)
T ss_pred cEEEecCCC
Confidence 999999985
No 146
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.81 E-value=0.00014 Score=57.80 Aligned_cols=80 Identities=24% Similarity=0.302 Sum_probs=59.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC---CEEEeCCCchHHHHHHHHhCC--CcccEEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA---DVCINYKTEDFVARVKEETGG--KGVDVIL 213 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~~~--~~~d~vi 213 (325)
.|-+|||+|+++++|+.+++-...+|=+|++..|++++++++++... ..+.|-.+.+..+.+.++..+ ...++++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli 83 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI 83 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence 37799999999999999999999999999999999999999886432 234444444433334443322 2579999
Q ss_pred eCCCh
Q 020487 214 DCMGA 218 (325)
Q Consensus 214 ~~~g~ 218 (325)
+|+|-
T Consensus 84 NNAGI 88 (245)
T COG3967 84 NNAGI 88 (245)
T ss_pred ecccc
Confidence 99874
No 147
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=97.79 E-value=0.00039 Score=55.76 Aligned_cols=93 Identities=19% Similarity=0.202 Sum_probs=67.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh----
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA---- 218 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~---- 218 (325)
|+|+||+|.+|..+++.+...|.+|++++|++++.+. ..+. +++..+..+ .+.+.+... ++|.||.+.|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~--~~~~-~~~~~d~~d-~~~~~~al~--~~d~vi~~~~~~~~~ 74 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED--SPGV-EIIQGDLFD-PDSVKAALK--GADAVIHAAGPPPKD 74 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH--CTTE-EEEESCTTC-HHHHHHHHT--TSSEEEECCHSTTTH
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc--cccc-ccceeeehh-hhhhhhhhh--hcchhhhhhhhhccc
Confidence 7899999999999999999999999999999998776 3333 344333333 245566555 69999999983
Q ss_pred -HHHHHhhccccCC--CEEEEEeccC
Q 020487 219 -SYFQRNLGSLNID--GRLFIIGTQG 241 (325)
Q Consensus 219 -~~~~~~~~~l~~~--g~~v~~g~~~ 241 (325)
.....+++.++.. .+++.++...
T Consensus 75 ~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 75 VDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred ccccccccccccccccccceeeeccc
Confidence 3345555555443 3788776655
No 148
>PTZ00075 Adenosylhomocysteinase; Provisional
Probab=97.75 E-value=0.00059 Score=62.14 Aligned_cols=90 Identities=18% Similarity=0.182 Sum_probs=69.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
-.|++++|.|. |.+|..+++.++.+|++|+++.+++.+...+...|+... + +.+.. +.+|+++.|.|
T Consensus 252 LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~~~G~~~~-~---------leell--~~ADIVI~atG 318 (476)
T PTZ00075 252 IAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAAMEGYQVV-T---------LEDVV--ETADIFVTATG 318 (476)
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHhcCceec-c---------HHHHH--hcCCEEEECCC
Confidence 46899999998 999999999999999999999877666544444565322 1 11222 26899999998
Q ss_pred hHHH--HHhhccccCCCEEEEEecc
Q 020487 218 ASYF--QRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 218 ~~~~--~~~~~~l~~~g~~v~~g~~ 240 (325)
...+ ...++.|++++.++.+|..
T Consensus 319 t~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 319 NKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred cccccCHHHHhccCCCcEEEEcCCC
Confidence 7653 4778999999999999765
No 149
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=97.69 E-value=0.00019 Score=60.77 Aligned_cols=106 Identities=25% Similarity=0.336 Sum_probs=76.6
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-E--EEeCCCchHH
Q 020487 125 CTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-V--CINYKTEDFV 197 (325)
Q Consensus 125 ~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~--~~~~~~~~~~ 197 (325)
..+...+.++.+++||+++|=+|+ +.|.+++.+|+..|++|+.++.|++..+.+++ .|.. . +.-.
T Consensus 58 ~~k~~~~~~kl~L~~G~~lLDiGC--GWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~------ 129 (283)
T COG2230 58 RAKLDLILEKLGLKPGMTLLDIGC--GWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQ------ 129 (283)
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCC--ChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEec------
Confidence 455666678899999999999996 68999999999999999999999998877654 4443 1 2111
Q ss_pred HHHHHHhCCCcccEEE-----eCCCh----HHHHHhhccccCCCEEEEEeccC
Q 020487 198 ARVKEETGGKGVDVIL-----DCMGA----SYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 198 ~~~~~~~~~~~~d~vi-----~~~g~----~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.++..+ .||-|+ +.+|. ..+..+.+.|+++|++.+.....
T Consensus 130 -d~rd~~e--~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 130 -DYRDFEE--PFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred -ccccccc--ccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 1122221 377775 45554 23677788999999998776544
No 150
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.68 E-value=0.00088 Score=56.15 Aligned_cols=103 Identities=18% Similarity=0.255 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEEEeC--CCchHHHHHHHHhC--CCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINY--KTEDFVARVKEETG--GKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~~~--~~~~~~~~~~~~~~--~~~~d 210 (325)
.+++++|+|++|.+|..+++.+...|++|+.+++++++.+.+. .+ +.-+.+.. .+......+.+... ..++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3679999999999999999999999999999999988776552 22 22223322 22222222211110 12579
Q ss_pred EEEeCCChH------------------------HHHHhhccccCCCEEEEEeccC
Q 020487 211 VILDCMGAS------------------------YFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 211 ~vi~~~g~~------------------------~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.++.+.+.. .+...+..++++|+++.++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~ 138 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMS 138 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecch
Confidence 999888731 0233445566789999887654
No 151
>PRK12742 oxidoreductase; Provisional
Probab=97.61 E-value=0.0011 Score=55.59 Aligned_cols=102 Identities=25% Similarity=0.374 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH-HHcCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KDLGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.+++++|+|++|.+|..+++.+...|++|+.+.+ ++++.+.+ .+++...+ .|..+........+.. .++|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 3689999999999999999999999999988765 44444433 34454332 2332322222222222 368999999
Q ss_pred CChHH--------------------------HHHhhccccCCCEEEEEeccCC
Q 020487 216 MGASY--------------------------FQRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 216 ~g~~~--------------------------~~~~~~~l~~~g~~v~~g~~~~ 242 (325)
.|... +..+...++.+|+++.++....
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 86410 0223344566789998876543
No 152
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.58 E-value=5.8e-05 Score=71.78 Aligned_cols=94 Identities=20% Similarity=0.275 Sum_probs=63.6
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC---------------------hhhHHHHHHcCCCEEEeCCC-
Q 020487 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS---------------------EEKLAVCKDLGADVCINYKT- 193 (325)
Q Consensus 136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~---------------------~~~~~~~~~~g~~~~~~~~~- 193 (325)
...+|++|+|+|+ |++|+++++.++..|++|++++.. ..+.+.++++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 3578999999999 999999999999999999998843 33556677889876665433
Q ss_pred chH-HHHHHHHhCCCcccEEEeCCChHH-HHHhhccccCCCEEE
Q 020487 194 EDF-VARVKEETGGKGVDVILDCMGASY-FQRNLGSLNIDGRLF 235 (325)
Q Consensus 194 ~~~-~~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v 235 (325)
.+. ...+. .++|.+|.++|... ....+.....+|.+.
T Consensus 212 ~~~~~~~~~-----~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~ 250 (564)
T PRK12771 212 EDITLEQLE-----GEFDAVFVAIGAQLGKRLPIPGEDAAGVLD 250 (564)
T ss_pred CcCCHHHHH-----hhCCEEEEeeCCCCCCcCCCCCCccCCcEE
Confidence 221 12211 25899999999753 222233334444443
No 153
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=97.58 E-value=0.00052 Score=60.07 Aligned_cols=107 Identities=19% Similarity=0.320 Sum_probs=73.9
Q ss_pred ceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCC---CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhH-H
Q 020487 104 QVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHL---SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKL-A 178 (325)
Q Consensus 104 ~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~---~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~-~ 178 (325)
..+++|+.+..+.++... +.+.++.++...... -++.+|+|+|+ |.+|..+++.++..|+ +|+++.++.++. +
T Consensus 140 ~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~ 217 (311)
T cd05213 140 KAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEE 217 (311)
T ss_pred HHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence 467778888877776543 556666665322221 36899999998 9999999999998875 789999988765 4
Q ss_pred HHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487 179 VCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221 (325)
Q Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (325)
.++++|+. +.+. +.+.+... .+|+||.|++.+..
T Consensus 218 la~~~g~~-~~~~------~~~~~~l~--~aDvVi~at~~~~~ 251 (311)
T cd05213 218 LAKELGGN-AVPL------DELLELLN--EADVVISATGAPHY 251 (311)
T ss_pred HHHHcCCe-EEeH------HHHHHHHh--cCCEEEECCCCCch
Confidence 55678773 3321 12233222 58999999997543
No 154
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.56 E-value=0.00092 Score=62.44 Aligned_cols=106 Identities=15% Similarity=0.226 Sum_probs=69.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---------cCC-----CEEEeCCCchHHH
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---------LGA-----DVCINYKTEDFVA 198 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---------~g~-----~~~~~~~~~~~~~ 198 (325)
...+.+.|.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ .|. -.++..+-.+ .+
T Consensus 73 ~~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD-~e 151 (576)
T PLN03209 73 KELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEK-PD 151 (576)
T ss_pred cccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCC-HH
Confidence 44556788999999999999999999999999999999999887654321 121 1122222222 23
Q ss_pred HHHHHhCCCcccEEEeCCChHH----------------HHHhhccccC--CCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASY----------------FQRNLGSLNI--DGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~----------------~~~~~~~l~~--~g~~v~~g~~~ 241 (325)
.+.+.++ ++|+||.|+|... ...+++.+.. .++||.++..+
T Consensus 152 sI~~aLg--giDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSig 210 (576)
T PLN03209 152 QIGPALG--NASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLG 210 (576)
T ss_pred HHHHHhc--CCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccch
Confidence 4445554 6899999987421 1233343332 36899887654
No 155
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0064 Score=51.67 Aligned_cols=80 Identities=21% Similarity=0.293 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecChhhHH----HHHHcCCCE---EEeCCCchHHHHHHHHhC--CCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSEEKLA----VCKDLGADV---CINYKTEDFVARVKEETG--GKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~~~~~----~~~~~g~~~---~~~~~~~~~~~~~~~~~~--~~~ 208 (325)
.+.+++|+|++|.+|..+++.+...|++ |+++.++.++.. .+++.+... ..|..+......+.+... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999999998 999998766544 223344332 123333222222222210 125
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++.+.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 8999999874
No 156
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.001 Score=57.19 Aligned_cols=77 Identities=29% Similarity=0.400 Sum_probs=55.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHHHh--CCCcccEEEeCCC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEET--GGKGVDVILDCMG 217 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~~~g 217 (325)
.+++|+|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|..+......+.+.. ...++|+++++.|
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~ag 81 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNAG 81 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 478999999999999999999999999999998887776665554433 3444433332222221 1236899999998
No 157
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.0012 Score=56.79 Aligned_cols=78 Identities=27% Similarity=0.443 Sum_probs=56.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHH----HhCCCcccEEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKE----ETGGKGVDVIL 213 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~----~~~~~~~d~vi 213 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+.+...+ .|..+......+.+ ..+ ..+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~-g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEAEGLEAFQLDYAEPESIAALVAQVLELSG-GRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCceEEEccCCCHHHHHHHHHHHHHHcC-CCccEEE
Confidence 35789999999999999999999999999999999888877766554432 24333332222222 222 2689999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
++.|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9876
No 158
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.41 E-value=0.00068 Score=51.56 Aligned_cols=92 Identities=13% Similarity=0.186 Sum_probs=59.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCC--EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
.+.+++|+|+ |.+|.+++..+...|+ +|+++.|+.++.+.+. .++.. ..++..+. .+.. ..+|++|+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~------~~~~--~~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDL------EEAL--QEADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGH------CHHH--HTESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHH------HHHH--hhCCeEEE
Confidence 4889999998 9999999999999999 5999999998876654 45332 23332221 1111 16999999
Q ss_pred CCChHHH---HHhhccccC-CCEEEEEec
Q 020487 215 CMGASYF---QRNLGSLNI-DGRLFIIGT 239 (325)
Q Consensus 215 ~~g~~~~---~~~~~~l~~-~g~~v~~g~ 239 (325)
|++.... ...+....+ -+.+++++.
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~ 110 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAV 110 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-S
T ss_pred ecCCCCcccCHHHHHHHHhhhhceecccc
Confidence 9886532 222222222 146666654
No 159
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.001 Score=58.78 Aligned_cols=80 Identities=29% Similarity=0.450 Sum_probs=55.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--EeCCCchHHHHHHHHh--CCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTEDFVARVKEET--GGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~~~~~~~~~~--~~~~~ 209 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.+++++.+.+ ++.+.+. + .|-.+......+.+.. ...++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 85 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI 85 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 468999999999999999999999999999999998876543 3345442 2 2333322222222211 11368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|++.|.
T Consensus 86 D~lVnnAG~ 94 (330)
T PRK06139 86 DVWVNNVGV 94 (330)
T ss_pred CEEEECCCc
Confidence 999999873
No 160
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.002 Score=54.24 Aligned_cols=78 Identities=24% Similarity=0.368 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ .+...+ .|..+......+.+.. .++|++|.+.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~--~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAA--GAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHh--CCCCEEEECC
Confidence 46799999999999999999999999999999998877665543 343322 2333332222333322 3689999998
Q ss_pred Ch
Q 020487 217 GA 218 (325)
Q Consensus 217 g~ 218 (325)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 73
No 161
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0016 Score=54.08 Aligned_cols=78 Identities=15% Similarity=0.168 Sum_probs=55.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEE--eCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCI--NYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.+++|+|++|.+|..+++.+...|++|++++++.++.+.+++++....+ |-.+....+.+.+...+.++|+++.+.|.
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag~ 81 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAGI 81 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCcc
Confidence 4689999999999999999999999999999988776666554332222 33333334444444444579999988764
No 162
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.36 E-value=0.0026 Score=54.25 Aligned_cols=78 Identities=23% Similarity=0.329 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
.+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+. +++.. ..+ |..+.... +.+.+..+ .+|
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 82 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFG--RVD 82 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 3679999999999999999999999999999999887655443 44432 122 33332222 22222233 589
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 83 ~lv~~ag~ 90 (261)
T PRK08265 83 ILVNLACT 90 (261)
T ss_pred EEEECCCC
Confidence 99998873
No 163
>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4). All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....
Probab=97.33 E-value=0.00013 Score=62.31 Aligned_cols=100 Identities=24% Similarity=0.314 Sum_probs=63.5
Q ss_pred HHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHH
Q 020487 129 STVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVK 201 (325)
Q Consensus 129 ~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~ 201 (325)
..+.+++++++|++||-+|+ +.|..+..+++..|++|+.++.+++..+.+++ .|.. .+...+- +
T Consensus 52 ~~~~~~~~l~~G~~vLDiGc--GwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~-------~ 122 (273)
T PF02353_consen 52 DLLCEKLGLKPGDRVLDIGC--GWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDY-------R 122 (273)
T ss_dssp HHHHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-G-------G
T ss_pred HHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeec-------c
Confidence 34558889999999999996 48999999999999999999999998887753 4422 2222111 1
Q ss_pred HHhCCCcccEEEe-----CCChH----HHHHhhccccCCCEEEEEec
Q 020487 202 EETGGKGVDVILD-----CMGAS----YFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 202 ~~~~~~~~d~vi~-----~~g~~----~~~~~~~~l~~~g~~v~~g~ 239 (325)
+..+ .||.|+. .+|.. .+..+.+.|+|||++++-..
T Consensus 123 ~~~~--~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~i 167 (273)
T PF02353_consen 123 DLPG--KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQTI 167 (273)
T ss_dssp G-----S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEEE
T ss_pred ccCC--CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEec
Confidence 2222 7898864 45532 25677789999999985533
No 164
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0043 Score=52.32 Aligned_cols=101 Identities=20% Similarity=0.308 Sum_probs=61.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHH----HHcCCC-EEE--eCCCchHHHHHHH-HhC-CCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVC----KDLGAD-VCI--NYKTEDFVARVKE-ETG-GKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~----~~~g~~-~~~--~~~~~~~~~~~~~-~~~-~~~ 208 (325)
.+.+++|+|++|.+|..++..+...|++|+++.++.. +.+.+ +..+.. ..+ |..+......+.+ ... ..+
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3678999999999999999999999999999887653 22222 222322 122 3333222222222 111 125
Q ss_pred ccEEEeCCChH--------------------HHHHhhccccCCCEEEEEec
Q 020487 209 VDVILDCMGAS--------------------YFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 209 ~d~vi~~~g~~--------------------~~~~~~~~l~~~g~~v~~g~ 239 (325)
+|+++.+.+.. .+..+...+..+|+++.+++
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS 135 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTS 135 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeC
Confidence 89998887531 12344455556788888765
No 165
>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]
Probab=97.27 E-value=0.0023 Score=54.13 Aligned_cols=149 Identities=17% Similarity=0.140 Sum_probs=99.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCC-----------chHH----HHHHH
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKT-----------EDFV----ARVKE 202 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~-----------~~~~----~~~~~ 202 (325)
.++.++++.|. |..|++++..++..|+-|........+.++.+.+|+...-..+. ++|. +.+.+
T Consensus 162 v~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~a~ 240 (356)
T COG3288 162 VSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELVAE 240 (356)
T ss_pred ccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhhhcccccccccccccCCCccccCCHHHHHHHHHHHHH
Confidence 45677899998 99999999999999999999998888888887777654321111 1121 12222
Q ss_pred HhCCCcccEEEeCCCh---H----HHHHhhccccCCCEEEEEeccCCcccc--cchHHHHhhccEeeec-ccccccchhH
Q 020487 203 ETGGKGVDVILDCMGA---S----YFQRNLGSLNIDGRLFIIGTQGGAKTE--LNITSLFAKRLTVQAA-GLRSRSTENK 272 (325)
Q Consensus 203 ~~~~~~~d~vi~~~g~---~----~~~~~~~~l~~~g~~v~~g~~~~~~~~--~~~~~~~~~~~~i~~~-~~~~~~~~~~ 272 (325)
.. +++|+||.+.-. + ....+++.|+||+.+|++....+.+-. .+..-...+++++.|. ++..+...+.
T Consensus 241 ~~--~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~pg~~v~~~gV~iig~~nlp~r~a~~a 318 (356)
T COG3288 241 QA--KEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTEPGKVVTKNGVKIIGYTNLPGRLAAQA 318 (356)
T ss_pred Hh--cCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCcccccCCeEEEeCCeEEEeecCcchhhhhhH
Confidence 22 379999998632 1 146788999999999998544433211 2222233467888876 5666655666
Q ss_pred HHHHHHHHHHHHHHHHC
Q 020487 273 ALIVSEVEKNVWPAIAV 289 (325)
Q Consensus 273 ~~~~~~~~~~~~~~~~~ 289 (325)
+.++..++-.+++++.+
T Consensus 319 S~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 319 SQLYATNLVNLLKLLCK 335 (356)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 66777777667766543
No 166
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0035 Score=55.61 Aligned_cols=78 Identities=21% Similarity=0.305 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEE---EeCCCchHHHHH----HHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVC---INYKTEDFVARV----KEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~---~~~~~~~~~~~~----~~~~~~~ 207 (325)
.+.+++|+|+++.+|..+++.+...|++|+++++++++.+.+. ..|.... .|-.+......+ .+..+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g-- 84 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELG-- 84 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCC--
Confidence 4678999999999999999999999999999999887665432 3454322 233332222222 22233
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|++|++.|.
T Consensus 85 ~iD~lInnAg~ 95 (334)
T PRK07109 85 PIDTWVNNAMV 95 (334)
T ss_pred CCCEEEECCCc
Confidence 68999999874
No 167
>PRK06182 short chain dehydrogenase; Validated
Probab=97.25 E-value=0.0038 Score=53.60 Aligned_cols=80 Identities=24% Similarity=0.299 Sum_probs=55.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHH-Hh-CCCcccEEEeC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKE-ET-GGKGVDVILDC 215 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~-~~-~~~~~d~vi~~ 215 (325)
++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+...+...+ .|-.+......+.+ .. ...++|+++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~~ 81 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVNN 81 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEEC
Confidence 36789999999999999999999999999999999887766554444322 24333332222222 11 12368999999
Q ss_pred CCh
Q 020487 216 MGA 218 (325)
Q Consensus 216 ~g~ 218 (325)
.|.
T Consensus 82 ag~ 84 (273)
T PRK06182 82 AGY 84 (273)
T ss_pred CCc
Confidence 873
No 168
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.25 E-value=0.0011 Score=57.67 Aligned_cols=78 Identities=24% Similarity=0.392 Sum_probs=54.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--CE-E--EeCCCchHH----HHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--DV-C--INYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~~-~--~~~~~~~~~----~~~~~~~~~~~ 208 (325)
++.+++|+|++|++|..+++.+...|++|++++++.++.+.+. .++. .. . .|-.+.... +.+.+..+ .
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~ 85 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFG--G 85 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcC--C
Confidence 4789999999999999999999999999999999888766543 4442 11 1 233332222 22222233 6
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|++|++.|.
T Consensus 86 id~vI~nAG~ 95 (296)
T PRK05872 86 IDVVVANAGI 95 (296)
T ss_pred CCEEEECCCc
Confidence 8999999984
No 169
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0042 Score=52.38 Aligned_cols=80 Identities=20% Similarity=0.259 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh-C-CCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET-G-GKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~-~-~~~~ 209 (325)
++.+++|+|++|.+|..++..+...|++|+++.+++++.+... ..+.. .++ |..+......+.+.. . ..++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4788999999999999999999999999999998877655432 22332 222 333322222222211 0 1368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.+.|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999874
No 170
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.22 E-value=0.0045 Score=56.71 Aligned_cols=141 Identities=16% Similarity=0.266 Sum_probs=89.5
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEE-EEEcC----------------CceeeeEEeecCCceeeCCCCCCHHhhccCcc
Q 020487 60 YPGLECSGTILSVGKNVSRWKVGDQV-CALLG----------------GGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPE 122 (325)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V-~~~~~----------------~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~ 122 (325)
.-|+|+++-+.+|+++....-+|+.= ++-+. ++.|++ .+++|+.+..+.+ ....
T Consensus 91 ~~g~ea~~hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~--------a~~~~k~v~~~t~-i~~~ 161 (423)
T PRK00045 91 HEGEEAVRHLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQK--------AFSVAKRVRTETG-IGAG 161 (423)
T ss_pred cCCHHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHH--------HHHHHhhHhhhcC-CCCC
Confidence 46999999999999988765555542 21110 122322 2344444443332 2333
Q ss_pred hHHHHHHHHHhhcC---CCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHH-HHHHcCCCEEEeCCCchHH
Q 020487 123 VACTVWSTVFMTSH---LSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLA-VCKDLGADVCINYKTEDFV 197 (325)
Q Consensus 123 ~~~~a~~~l~~~~~---~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 197 (325)
+.+.++.++..... --++.+++|+|+ |.+|.++++.+...|+ +|+++.++.++.. .++.+|.. +++.
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------ 233 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------ 233 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------
Confidence 45556666532221 246789999998 9999999999999998 8999999988765 55567753 3221
Q ss_pred HHHHHHhCCCcccEEEeCCChH
Q 020487 198 ARVKEETGGKGVDVILDCMGAS 219 (325)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~ 219 (325)
....+... ++|+||+|++.+
T Consensus 234 ~~~~~~l~--~aDvVI~aT~s~ 253 (423)
T PRK00045 234 DELPEALA--EADIVISSTGAP 253 (423)
T ss_pred HHHHHHhc--cCCEEEECCCCC
Confidence 22233332 689999999864
No 171
>TIGR00406 prmA ribosomal protein L11 methyltransferase. Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.
Probab=97.18 E-value=0.0029 Score=54.83 Aligned_cols=145 Identities=11% Similarity=0.055 Sum_probs=81.7
Q ss_pred CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH--HHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~--~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
.+++|++.+..+. |.++...+...++.+...+.+-.+ ....|.. ..+.. ...++++||-.|+ |. |..
T Consensus 105 p~~~g~~~~i~p~---w~~~~~~~~~~~i~ldpg~aFgtG----~h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~l 173 (288)
T TIGR00406 105 PVQFGKRFWICPS---WRDVPSDEDALIIMLDPGLAFGTG----THPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GIL 173 (288)
T ss_pred CEEEcCeEEEECC---CcCCCCCCCcEEEEECCCCcccCC----CCHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence 4677887776643 333322222344555444443322 1222222 22222 2357899999997 54 877
Q ss_pred HHHHHHHCCC-EEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCChH----HHHHhh
Q 020487 156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMGAS----YFQRNL 225 (325)
Q Consensus 156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~----~~~~~~ 225 (325)
++.+++ .|+ +|++++.++...+.+++ .+.. .+...... .... ...+||+|+...... .+..+.
T Consensus 174 ai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~~-----~~~~-~~~~fDlVvan~~~~~l~~ll~~~~ 246 (288)
T TIGR00406 174 SIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLIY-----LEQP-IEGKADVIVANILAEVIKELYPQFS 246 (288)
T ss_pred HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEecc-----cccc-cCCCceEEEEecCHHHHHHHHHHHH
Confidence 776665 465 89999999887766653 1211 11111110 1111 134799999876543 245667
Q ss_pred ccccCCCEEEEEecc
Q 020487 226 GSLNIDGRLFIIGTQ 240 (325)
Q Consensus 226 ~~l~~~g~~v~~g~~ 240 (325)
+.|+|+|.++..|..
T Consensus 247 ~~LkpgG~li~sgi~ 261 (288)
T TIGR00406 247 RLVKPGGWLILSGIL 261 (288)
T ss_pred HHcCCCcEEEEEeCc
Confidence 899999999988754
No 172
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.18 E-value=0.003 Score=53.72 Aligned_cols=102 Identities=27% Similarity=0.437 Sum_probs=69.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--E--eCCC-ch---HHHHHHHHhC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--I--NYKT-ED---FVARVKEETG 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~--~~~~-~~---~~~~~~~~~~ 205 (325)
.|..|+|+||++++|.+++.-.-+.|++++.+.+..++++.+ ++.+... + + |-.+ ++ +.+++....|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 478999999999999999999999999999999888887766 3344332 2 2 2222 22 2233333444
Q ss_pred CCcccEEEeCCChH--------------------------HHHHhhccccC--CCEEEEEeccCC
Q 020487 206 GKGVDVILDCMGAS--------------------------YFQRNLGSLNI--DGRLFIIGTQGG 242 (325)
Q Consensus 206 ~~~~d~vi~~~g~~--------------------------~~~~~~~~l~~--~g~~v~~g~~~~ 242 (325)
++|+.+++.|-. .+..++..|++ +|+++.+++..+
T Consensus 91 --~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG 153 (282)
T KOG1205|consen 91 --RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAG 153 (282)
T ss_pred --CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEecccc
Confidence 799999988741 02244555544 399999977665
No 173
>PRK08017 oxidoreductase; Provisional
Probab=97.16 E-value=0.0036 Score=53.03 Aligned_cols=76 Identities=26% Similarity=0.302 Sum_probs=53.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHH----HHHHHHhCCCcccEEEeC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFV----ARVKEETGGKGVDVILDC 215 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~d~vi~~ 215 (325)
++++|+|++|.+|..+++.+...|++|+++.++.++.+.+++.+...+ .|..+.... +.+.+..+ ..+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~-~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNSLGFTGILLDLDDPESVERAADEVIALTD-NRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHhCCCeEEEeecCCHHHHHHHHHHHHHhcC-CCCeEEEEC
Confidence 479999999999999999999999999999999888877776665433 233332221 22222222 357888888
Q ss_pred CC
Q 020487 216 MG 217 (325)
Q Consensus 216 ~g 217 (325)
.|
T Consensus 82 ag 83 (256)
T PRK08017 82 AG 83 (256)
T ss_pred CC
Confidence 76
No 174
>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional
Probab=97.15 E-value=0.0046 Score=55.73 Aligned_cols=110 Identities=22% Similarity=0.306 Sum_probs=74.6
Q ss_pred cchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHH
Q 020487 121 PEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARV 200 (325)
Q Consensus 121 ~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 200 (325)
..+....+..+.+...++++++||-+|+ +.|..+..+++..|++|++++.+++..+.+++......+.....++
T Consensus 149 ~~Aq~~k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~---- 222 (383)
T PRK11705 149 EEAQEAKLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---- 222 (383)
T ss_pred HHHHHHHHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch----
Confidence 3334455555667778899999999996 4788888899888999999999999988887543221111111111
Q ss_pred HHHhCCCcccEEEeC-----CCh----HHHHHhhccccCCCEEEEEe
Q 020487 201 KEETGGKGVDVILDC-----MGA----SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 201 ~~~~~~~~~d~vi~~-----~g~----~~~~~~~~~l~~~g~~v~~g 238 (325)
.+. ...||.|+.. +|. ..+..+.+.|+|+|.++...
T Consensus 223 ~~l--~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 223 RDL--NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred hhc--CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 111 2369988743 343 23577788999999998764
No 175
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.13 E-value=0.0033 Score=55.40 Aligned_cols=79 Identities=24% Similarity=0.353 Sum_probs=55.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H----cCCCE----EEeCCC--chHHHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D----LGADV----CINYKT--EDFVARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~----~g~~~----~~~~~~--~~~~~~~~~~~~~~ 207 (325)
.|.+++|+||++++|.+.++.+...|++|+++++++++.+.+. + .+... ..|-.+ ....+.+.+..++.
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 4789999999999999999998889999999999998776543 2 11111 223332 23344555555554
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
.+|++++++|
T Consensus 132 didilVnnAG 141 (320)
T PLN02780 132 DVGVLINNVG 141 (320)
T ss_pred CccEEEEecC
Confidence 5679999876
No 176
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.12 E-value=0.0053 Score=50.91 Aligned_cols=78 Identities=27% Similarity=0.395 Sum_probs=55.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.+++|+|++|.+|..+++.+...|++|++++++.+..+.++..+... ..|-.+......+.+...+.++|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 46899999999999999988888999999999888777666555432 2233333333333333333468999998764
No 177
>PRK06128 oxidoreductase; Provisional
Probab=97.11 E-value=0.0081 Score=52.38 Aligned_cols=101 Identities=22% Similarity=0.365 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--H----HHHHHcCCCE-EE--eCCCchHH----HHHHHHhC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--L----AVCKDLGADV-CI--NYKTEDFV----ARVKEETG 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~----~~~~~~g~~~-~~--~~~~~~~~----~~~~~~~~ 205 (325)
.+.++||+|+++.+|..++..+...|++|+++.++.+. . +.++..+... .+ |-.+.... +.+.+..+
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 133 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG 133 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence 36799999999999999999999999999887754321 1 2223334322 22 32222222 22222333
Q ss_pred CCcccEEEeCCChH---------------------------HHHHhhccccCCCEEEEEeccC
Q 020487 206 GKGVDVILDCMGAS---------------------------YFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 206 ~~~~d~vi~~~g~~---------------------------~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
++|++|.+.|.. .+..++..+.++|+++.++...
T Consensus 134 --~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~ 194 (300)
T PRK06128 134 --GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQ 194 (300)
T ss_pred --CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCcc
Confidence 689999988731 0123344566788998876544
No 178
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.11 E-value=0.0036 Score=53.36 Aligned_cols=77 Identities=30% Similarity=0.427 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CCC-EEE--eCCCch-HH---HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GAD-VCI--NYKTED-FV---ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~-~~~--~~~~~~-~~---~~~~~~~~~~~~d 210 (325)
++.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+.+. +.. ..+ |-.+.. .. +.+.+..+ .+|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 81 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFG--KID 81 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 478999999999999999999999999999999988776665542 322 122 322222 11 22222233 689
Q ss_pred EEEeCCC
Q 020487 211 VILDCMG 217 (325)
Q Consensus 211 ~vi~~~g 217 (325)
+++++.|
T Consensus 82 ~li~~Ag 88 (262)
T TIGR03325 82 CLIPNAG 88 (262)
T ss_pred EEEECCC
Confidence 9999986
No 179
>PRK12367 short chain dehydrogenase; Provisional
Probab=97.07 E-value=0.0054 Score=51.82 Aligned_cols=76 Identities=16% Similarity=0.256 Sum_probs=49.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
+.+++|+|++|.+|..+++.+...|++|+++.++..........+....+..+..+ ...+.+..+ .+|++|+|+|.
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~--~iDilVnnAG~ 89 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESNDESPNEWIKWECGK-EESLDKQLA--SLDVLILNHGI 89 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhhccCCCeEEEeeCCC-HHHHHHhcC--CCCEEEECCcc
Confidence 67999999999999999999999999999998876222111111112222222222 123334443 59999999874
No 180
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.07 E-value=0.0089 Score=55.36 Aligned_cols=79 Identities=25% Similarity=0.416 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh--hhHHHH-HHcCCCE-EEeCCCchHHHHHHHHhC--CCcccEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGADV-CINYKTEDFVARVKEETG--GKGVDVI 212 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~--~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~--~~~~d~v 212 (325)
++.+++|+|++|.+|..+++.+...|++|+++.+.. +..+.+ .+++... ..|-.+......+.+... ..++|++
T Consensus 209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v 288 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV 288 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 478999999999999999999999999999988743 222222 3455432 234444333333333221 1268999
Q ss_pred EeCCC
Q 020487 213 LDCMG 217 (325)
Q Consensus 213 i~~~g 217 (325)
|.+.|
T Consensus 289 i~~AG 293 (450)
T PRK08261 289 VHNAG 293 (450)
T ss_pred EECCC
Confidence 99988
No 181
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.0034 Score=53.42 Aligned_cols=79 Identities=32% Similarity=0.384 Sum_probs=54.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC--EEE--eCCCchHH----HHHHHHhCCCc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD--VCI--NYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~--~~~--~~~~~~~~----~~~~~~~~~~~ 208 (325)
-++.++||+|++|.+|..++..+...|++|+++.++.+..+.+.+ .... .++ |..+.... +.+.+..+ +
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 86 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFG--G 86 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhC--C
Confidence 467899999999999999999999999999999998776655443 2222 222 33332221 22222233 6
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+||.+.|.
T Consensus 87 ~d~vi~~ag~ 96 (264)
T PRK12829 87 LDVLVNNAGI 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999998874
No 182
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.06 E-value=0.005 Score=52.47 Aligned_cols=82 Identities=24% Similarity=0.371 Sum_probs=53.7
Q ss_pred CCCCCEEEEEcCCc-hHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cCCCEE--E--eCCCchHHHHHHHHh--
Q 020487 137 LSPGESFLVHGGSS-GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGADVC--I--NYKTEDFVARVKEET-- 204 (325)
Q Consensus 137 ~~~~~~vli~g~~g-~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g~~~~--~--~~~~~~~~~~~~~~~-- 204 (325)
+..+.+++|+|++| ++|.++++.+...|++|+++.++.++.+...+ ++...+ + |..+......+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 34578999999986 79999999999999999999988776544321 343222 2 333322222222211
Q ss_pred CCCcccEEEeCCCh
Q 020487 205 GGKGVDVILDCMGA 218 (325)
Q Consensus 205 ~~~~~d~vi~~~g~ 218 (325)
....+|++|.+.|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 11268999999983
No 183
>PRK06484 short chain dehydrogenase; Validated
Probab=97.05 E-value=0.0057 Score=57.73 Aligned_cols=101 Identities=18% Similarity=0.299 Sum_probs=67.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHHH----HHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFVA----RVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~~----~~~~~~~~~~~d 210 (325)
.+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+. +++... .+ |-.+..... .+.+..+ .+|
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 345 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWG--RLD 345 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence 4678999999999999999999999999999999888776654 344332 12 333322222 2222223 689
Q ss_pred EEEeCCChH------------H---------------HHHhhccccCCCEEEEEeccC
Q 020487 211 VILDCMGAS------------Y---------------FQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 211 ~vi~~~g~~------------~---------------~~~~~~~l~~~g~~v~~g~~~ 241 (325)
++|.++|.. . +..++..++.+|+++.+++..
T Consensus 346 ~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~ 403 (520)
T PRK06484 346 VLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIA 403 (520)
T ss_pred EEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchh
Confidence 999988731 0 123344556679999887654
No 184
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0058 Score=53.09 Aligned_cols=78 Identities=29% Similarity=0.475 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHH----HhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKE----ETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~----~~~~~ 207 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +.+.. ..+ |-.+......+.+ ..+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g-- 116 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIG-- 116 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 3578999999999999999999999999999999987765443 22322 122 3233222222222 222
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|+++.|.|.
T Consensus 117 ~id~li~~AG~ 127 (293)
T PRK05866 117 GVDILINNAGR 127 (293)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 185
>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....
Probab=97.03 E-value=0.006 Score=47.29 Aligned_cols=100 Identities=17% Similarity=0.178 Sum_probs=64.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
-.|.+++|.|- |.+|..+++.++.+|++|++++..+-+.-++..-|.. +. .+.+... ..|+++.+.|
T Consensus 21 l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~~dGf~-v~---------~~~~a~~--~adi~vtaTG 87 (162)
T PF00670_consen 21 LAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAAMDGFE-VM---------TLEEALR--DADIFVTATG 87 (162)
T ss_dssp -TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHHHTT-E-EE----------HHHHTT--T-SEEEE-SS
T ss_pred eCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhhhcCcE-ec---------CHHHHHh--hCCEEEECCC
Confidence 46899999996 9999999999999999999999988776666555653 22 1233332 5799999999
Q ss_pred hHH--HHHhhccccCCCEEEEEeccCCcccccchHHHH
Q 020487 218 ASY--FQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF 253 (325)
Q Consensus 218 ~~~--~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 253 (325)
... ....++.|+++.-+..+|... ..++...+.
T Consensus 88 ~~~vi~~e~~~~mkdgail~n~Gh~d---~Eid~~~L~ 122 (162)
T PF00670_consen 88 NKDVITGEHFRQMKDGAILANAGHFD---VEIDVDALE 122 (162)
T ss_dssp SSSSB-HHHHHHS-TTEEEEESSSST---TSBTHHHHH
T ss_pred CccccCHHHHHHhcCCeEEeccCcCc---eeEeecccc
Confidence 754 356678888887777665433 244544433
No 186
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0048 Score=52.71 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCC-EEE--eCCCchHHHHHHH-HhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GAD-VCI--NYKTEDFVARVKE-ETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~-~~~--~~~~~~~~~~~~~-~~~~~~~ 209 (325)
.+.+++|+|+++++|.++++.+...|++|++++++.++.+.+. ++ +.+ ..+ |-.+....+.+.+ .....++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 3788999999999999999999999999999999887665443 22 222 122 3233222222222 2112368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++++.|.
T Consensus 87 D~lv~nag~ 95 (263)
T PRK08339 87 DIFFFSTGG 95 (263)
T ss_pred cEEEECCCC
Confidence 999999873
No 187
>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional
Probab=97.02 E-value=0.011 Score=48.24 Aligned_cols=100 Identities=16% Similarity=0.231 Sum_probs=66.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcC-CCEEEeCCCchHHHHHHHHhC
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLG-ADVCINYKTEDFVARVKEETG 205 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g-~~~~~~~~~~~~~~~~~~~~~ 205 (325)
.+..+.++++++.+|+ |. |..++.+++..+ .+|++++.+++..+.++ .++ .+.+.... .+..+.+.+ .
T Consensus 34 ~~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~d~~~~l~~-~- 108 (198)
T PRK00377 34 SKLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-GEAPEILFT-I- 108 (198)
T ss_pred HHcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-echhhhHhh-c-
Confidence 4567889999999998 55 888888888763 58999999988777554 355 23222111 111111221 1
Q ss_pred CCcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487 206 GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 206 ~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~ 237 (325)
...+|.|+...+. ..+..+.+.|+|+|+++..
T Consensus 109 ~~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 144 (198)
T PRK00377 109 NEKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVID 144 (198)
T ss_pred CCCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEEE
Confidence 2369999986553 2356778889999999853
No 188
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.02 E-value=0.024 Score=51.86 Aligned_cols=140 Identities=16% Similarity=0.274 Sum_probs=87.4
Q ss_pred CCCCceeEEEEEecCCCCCCCCCCEEE-E----------------EcCCceeeeEEeecCCceee---C-CCCCCHHhhc
Q 020487 60 YPGLECSGTILSVGKNVSRWKVGDQVC-A----------------LLGGGGYAEKVAVPAGQVLP---V-PSGVSLKDAA 118 (325)
Q Consensus 60 ~~G~e~~G~V~~vG~~~~~~~~Gd~V~-~----------------~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa 118 (325)
.-|.|+++-+.+|+++....-+|+.=. + ...++.|++++.+.. .+.. + +..++...+|
T Consensus 89 ~~~~~a~~hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~A 167 (417)
T TIGR01035 89 LTGESAVEHLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTETDISAGAVSISSAA 167 (417)
T ss_pred cCchHHHHHHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHHH
Confidence 468899999999999887655565532 1 111356777766654 2222 2 2222222111
Q ss_pred cCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHH-HHHHcCCCEEEeCCCchH
Q 020487 119 AFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLA-VCKDLGADVCINYKTEDF 196 (325)
Q Consensus 119 ~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~ 196 (325)
..........-++++++|+|+ |.+|..+++.+...| .+|+++.++.++.. .++.++.. .++.
T Consensus 168 ---------v~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~----- 231 (417)
T TIGR01035 168 ---------VELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF----- 231 (417)
T ss_pred ---------HHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH-----
Confidence 111112233356899999998 999999999999999 58999999887754 45567653 2221
Q ss_pred HHHHHHHhCCCcccEEEeCCChH
Q 020487 197 VARVKEETGGKGVDVILDCMGAS 219 (325)
Q Consensus 197 ~~~~~~~~~~~~~d~vi~~~g~~ 219 (325)
..+.+... ++|+||+|++.+
T Consensus 232 -~~l~~~l~--~aDvVi~aT~s~ 251 (417)
T TIGR01035 232 -EDLEEYLA--EADIVISSTGAP 251 (417)
T ss_pred -HHHHHHHh--hCCEEEECCCCC
Confidence 12233332 689999999864
No 189
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.00 E-value=0.0058 Score=51.82 Aligned_cols=80 Identities=23% Similarity=0.300 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-EeCCCchHHHHHHHHh--CCCcccEEEe
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEET--GGKGVDVILD 214 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~--~~~~~d~vi~ 214 (325)
.+.+++|+|++|.+|..+++.+...|++|+++++++.+.+... +++...+ .|..+......+.+.. ...++|.++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4789999999999999999999999999999998877665443 4443322 2433333222222211 1126899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8863
No 190
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=96.99 E-value=0.0061 Score=51.40 Aligned_cols=80 Identities=18% Similarity=0.242 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCC-EEE--eCCCchHHH-HHHHHh-CCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGAD-VCI--NYKTEDFVA-RVKEET-GGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~-~~~--~~~~~~~~~-~~~~~~-~~~~~d~ 211 (325)
.+.+++|+|++|.+|..++..+...|++|++++++... .+..++.+.. ..+ |..+..... .+.+.. ...++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 83 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999999999999986532 2233344432 222 322222221 112111 1126899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++.+.|.
T Consensus 84 li~~ag~ 90 (248)
T TIGR01832 84 LVNNAGI 90 (248)
T ss_pred EEECCCC
Confidence 9998863
No 191
>PRK07904 short chain dehydrogenase; Provisional
Probab=96.99 E-value=0.007 Score=51.35 Aligned_cols=82 Identities=23% Similarity=0.274 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhh-HHH----HHHcCC-C-EEE--eCCCch-HHHHHHHHhC
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEK-LAV----CKDLGA-D-VCI--NYKTED-FVARVKEETG 205 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~-~~~----~~~~g~-~-~~~--~~~~~~-~~~~~~~~~~ 205 (325)
+..+.+++|+|+++++|..+++.+... |++|+++++++++ .+. +++.+. + +++ |..+.. ..+.+.+...
T Consensus 5 ~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 84 (253)
T PRK07904 5 VGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFA 84 (253)
T ss_pred cCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHh
Confidence 456789999999999999999887777 4899999988765 332 233332 1 223 322222 2222333332
Q ss_pred CCcccEEEeCCCh
Q 020487 206 GKGVDVILDCMGA 218 (325)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (325)
...+|+++.+.|.
T Consensus 85 ~g~id~li~~ag~ 97 (253)
T PRK07904 85 GGDVDVAIVAFGL 97 (253)
T ss_pred cCCCCEEEEeeec
Confidence 2479999987764
No 192
>PRK06196 oxidoreductase; Provisional
Probab=96.99 E-value=0.0056 Score=53.79 Aligned_cols=79 Identities=20% Similarity=0.317 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHHHHHHH-HhC-CCcccEEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFVARVKE-ETG-GKGVDVIL 213 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~~~~~~-~~~-~~~~d~vi 213 (325)
.+.+++|+|++|.+|..++..+...|++|++++++.++.+.+. ++..-..+ |-.+......+.+ ... ..++|++|
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 4679999999999999999999999999999999887665433 22211222 3333222222222 111 13689999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
.++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9987
No 193
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.98 E-value=0.006 Score=51.82 Aligned_cols=78 Identities=24% Similarity=0.351 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHH----HHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~ 207 (325)
.+.++||+|++|.+|..+++.+...|++|+++.+++++.+.. ++.+... .+ |..+...... +.+..+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 83 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFG-- 83 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence 368899999999999999999999999999999988655433 2344332 22 3223222222 222222
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|+++.|.|.
T Consensus 84 ~~d~vi~~ag~ 94 (262)
T PRK13394 84 SVDILVSNAGI 94 (262)
T ss_pred CCCEEEECCcc
Confidence 58999998874
No 194
>PRK07814 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0048 Score=52.65 Aligned_cols=77 Identities=18% Similarity=0.299 Sum_probs=52.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHH----HHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVK----EETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~----~~~~~~ 207 (325)
++.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ..+.. ..+ |.........+. +.. .
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~ 86 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAF--G 86 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc--C
Confidence 4789999999999999999999999999999999887655433 22322 222 333322222222 222 2
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
++|++|+++|
T Consensus 87 ~id~vi~~Ag 96 (263)
T PRK07814 87 RLDIVVNNVG 96 (263)
T ss_pred CCCEEEECCC
Confidence 6899999887
No 195
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=96.98 E-value=0.0046 Score=52.69 Aligned_cols=77 Identities=27% Similarity=0.407 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
++.+++|+|+++.+|..+++.+...|++|+++.+++++.+.+.+ ++.. ..+ |-.+.... +.+.+..+ .+|
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id 82 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFG--KLD 82 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcC--CCC
Confidence 46799999999999999999999999999999998877765543 3321 222 22222211 22222222 689
Q ss_pred EEEeCCC
Q 020487 211 VILDCMG 217 (325)
Q Consensus 211 ~vi~~~g 217 (325)
+++++.|
T Consensus 83 ~li~~ag 89 (263)
T PRK06200 83 CFVGNAG 89 (263)
T ss_pred EEEECCC
Confidence 9999987
No 196
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=96.97 E-value=0.0021 Score=51.42 Aligned_cols=88 Identities=15% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|.|+|. |.+|..+++.++.+|++|++..++..........+.. .. ++. ++.. ..|+|+.+...
T Consensus 35 ~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~~~~~-~~-----~l~-ell~-----~aDiv~~~~pl 101 (178)
T PF02826_consen 35 RGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGADEFGVE-YV-----SLD-ELLA-----QADIVSLHLPL 101 (178)
T ss_dssp TTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHHTTEE-ES-----SHH-HHHH-----H-SEEEE-SSS
T ss_pred CCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcccccce-ee-----ehh-hhcc-----hhhhhhhhhcc
Confidence 4899999998 9999999999999999999999988876645555441 11 111 2211 47999988773
Q ss_pred -HH----H-HHhhccccCCCEEEEEec
Q 020487 219 -SY----F-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 -~~----~-~~~~~~l~~~g~~v~~g~ 239 (325)
+. + ...+..|+++..+|.++.
T Consensus 102 t~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 102 TPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp STTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred ccccceeeeeeeeeccccceEEEeccc
Confidence 21 2 455788888888887653
No 197
>PRK06841 short chain dehydrogenase; Provisional
Probab=96.96 E-value=0.0057 Score=51.80 Aligned_cols=78 Identities=27% Similarity=0.403 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.++.+......++.... .+ |..+.... +.+.+..+ ++|
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~d 91 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFG--RID 91 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 3679999999999999999999999999999998876554444432211 22 32222211 22222222 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 92 ~vi~~ag~ 99 (255)
T PRK06841 92 ILVNSAGV 99 (255)
T ss_pred EEEECCCC
Confidence 99999873
No 198
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=96.96 E-value=0.019 Score=45.19 Aligned_cols=95 Identities=19% Similarity=0.317 Sum_probs=63.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH--
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-- 219 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-- 219 (325)
+|.|+|++|-+|....+=|...|-.|++++|++.+....+.. .++.-+-.+ .+.+.+.. .++|+||++.+..
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~~~---~i~q~Difd-~~~~a~~l--~g~DaVIsA~~~~~~ 75 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQGV---TILQKDIFD-LTSLASDL--AGHDAVISAFGAGAS 75 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccccc---eeecccccC-hhhhHhhh--cCCceEEEeccCCCC
Confidence 588999999999999999999999999999999888654322 122111111 12222333 3799999998753
Q ss_pred --------HHHHhhccccCC--CEEEEEeccCC
Q 020487 220 --------YFQRNLGSLNID--GRLFIIGTQGG 242 (325)
Q Consensus 220 --------~~~~~~~~l~~~--g~~v~~g~~~~ 242 (325)
..+.+++.|+.- .|+..+|+.+.
T Consensus 76 ~~~~~~~k~~~~li~~l~~agv~RllVVGGAGS 108 (211)
T COG2910 76 DNDELHSKSIEALIEALKGAGVPRLLVVGGAGS 108 (211)
T ss_pred ChhHHHHHHHHHHHHHHhhcCCeeEEEEcCccc
Confidence 123455566653 48888887653
No 199
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.95 E-value=0.0072 Score=50.99 Aligned_cols=79 Identities=19% Similarity=0.288 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHHHHHHh-C-CCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVARVKEET-G-GKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~~~~~-~-~~~~ 209 (325)
++.+++|+|++|.+|..+++.+...|++|++++++..+.+.. +..+... .+ |..+......+.+.. . ..++
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999999999999999999887665433 2334332 22 322222222222211 1 1268
Q ss_pred cEEEeCCC
Q 020487 210 DVILDCMG 217 (325)
Q Consensus 210 d~vi~~~g 217 (325)
|.+|.+.|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999887
No 200
>PRK07832 short chain dehydrogenase; Provisional
Probab=96.95 E-value=0.026 Score=48.40 Aligned_cols=75 Identities=28% Similarity=0.450 Sum_probs=50.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE----EEeCCCchHHH----HHHHHhCCCcc
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV----CINYKTEDFVA----RVKEETGGKGV 209 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~----~~~~~~~~~~~----~~~~~~~~~~~ 209 (325)
+++|+|++|.+|..+++.+...|++|+++.++++..+.. +..+... ..|-.+..... .+.+.. .++
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~i 79 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAH--GSM 79 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhc--CCC
Confidence 689999999999999999999999999999887765433 2233321 23433332222 222222 268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.+.|.
T Consensus 80 d~lv~~ag~ 88 (272)
T PRK07832 80 DVVMNIAGI 88 (272)
T ss_pred CEEEECCCC
Confidence 999999874
No 201
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.94 E-value=0.0091 Score=51.23 Aligned_cols=77 Identities=18% Similarity=0.235 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADVCI--NYKTEDF----VARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~~~--~~~~~~~----~~~~~~~~~~ 206 (325)
.++++||+|+++ ++|.++++.+...|++|+++.++++..+.+ ++.|....+ |-.+... .+.+.+..+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 84 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWG- 84 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhC-
Confidence 478899999975 899999999999999999988765322222 234533333 3333222 222223333
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 85 -~iD~lVnnAG 94 (271)
T PRK06505 85 -KLDFVVHAIG 94 (271)
T ss_pred -CCCEEEECCc
Confidence 6899999987
No 202
>PRK09291 short chain dehydrogenase; Provisional
Probab=96.94 E-value=0.0082 Score=50.85 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=51.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
+.++||+|++|.+|..+++.+...|++|++++++..+...+.+ .+.. .++..+-.+ ...+.+... .++|++|.
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~-~~id~vi~ 79 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTD-AIDRAQAAE-WDVDVLLN 79 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCC-HHHHHHHhc-CCCCEEEE
Confidence 3579999999999999999999999999999988776554432 2322 122112222 123333332 37999999
Q ss_pred CCC
Q 020487 215 CMG 217 (325)
Q Consensus 215 ~~g 217 (325)
|.|
T Consensus 80 ~ag 82 (257)
T PRK09291 80 NAG 82 (257)
T ss_pred CCC
Confidence 987
No 203
>PRK06949 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.0063 Score=51.61 Aligned_cols=78 Identities=23% Similarity=0.348 Sum_probs=52.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC-EEE--eCCCch-HH---HHHHHHhCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD-VCI--NYKTED-FV---ARVKEETGG 206 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~-~~~--~~~~~~-~~---~~~~~~~~~ 206 (325)
..+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+.. .+.. .++ |..... .. ..+.+..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 84 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEA-- 84 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhc--
Confidence 347899999999999999999999999999999998887654432 1221 222 222221 11 1222222
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
..+|+++.+.|
T Consensus 85 ~~~d~li~~ag 95 (258)
T PRK06949 85 GTIDILVNNSG 95 (258)
T ss_pred CCCCEEEECCC
Confidence 26899999988
No 204
>PRK07825 short chain dehydrogenase; Provisional
Probab=96.93 E-value=0.01 Score=50.82 Aligned_cols=77 Identities=22% Similarity=0.290 Sum_probs=53.1
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE--eCCCchHH----HHHHHHhCCCcccEE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI--NYKTEDFV----ARVKEETGGKGVDVI 212 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~--~~~~~~~~----~~~~~~~~~~~~d~v 212 (325)
+.+++|+|++|.+|..+++.+...|++|+++.+++++.+.+. .++....+ |-.+.... +.+.+.. .++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADL--GPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHc--CCCCEE
Confidence 578999999999999999988889999999999888765543 34412222 33332222 2222222 268999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
+.+.|.
T Consensus 83 i~~ag~ 88 (273)
T PRK07825 83 VNNAGV 88 (273)
T ss_pred EECCCc
Confidence 999873
No 205
>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]
Probab=96.93 E-value=0.0057 Score=52.02 Aligned_cols=209 Identities=15% Similarity=0.140 Sum_probs=115.0
Q ss_pred CCCeEEEEEeeeecChhhhhhh--hCCCCCCCCCCCCCC-CceeEEEEEecC-CCCCCCCCCEEEEEcCC---ceeeeE-
Q 020487 26 KDDEVLIKVEATALNRADTLQR--KGSYPPPKGASPYPG-LECSGTILSVGK-NVSRWKVGDQVCALLGG---GGYAEK- 97 (325)
Q Consensus 26 ~~~ev~v~v~~~~i~~~D~~~~--~g~~~~~~~~p~~~G-~e~~G~V~~vG~-~~~~~~~Gd~V~~~~~~---g~~~~~- 97 (325)
..+||+|+.-+..-+..|-..+ .|..-.. +..-.++ .|.+=.|.+-=+ ....|+.|...+.+-+- ....+-
T Consensus 29 ~GheVlVe~gAG~gsg~~D~~Y~~aGA~Iv~-ta~~vw~~~dmvvKvKEP~~~EY~ylregqiLftyLHLA~~~~lt~~l 107 (371)
T COG0686 29 HGHEVLVETGAGAGSGFDDDDYEAAGAKIVA-TAAEVWAEADMVVKVKEPLPSEYPYLREGQILFTYLHLAASPELTEAL 107 (371)
T ss_pred CCcEEEEecCCcCCCCCChHHHHHcCCEEec-CHHHhhcccceEEEecCCChhhhhhhcCCcEEEEEeeecCChHHHHHH
Confidence 4678999988876654332222 2211110 0011233 555555544222 23458889998876531 100000
Q ss_pred ----EeecCCceeeCCC-C----CCHHhhccCcchHHHHHHHHHhh----------cCCCCCCEEEEEcCCchHHHHHHH
Q 020487 98 ----VAVPAGQVLPVPS-G----VSLKDAAAFPEVACTVWSTVFMT----------SHLSPGESFLVHGGSSGIGTFAIQ 158 (325)
Q Consensus 98 ----~~~~~~~~~~~p~-~----~~~~~aa~l~~~~~~a~~~l~~~----------~~~~~~~~vli~g~~g~~G~~~~~ 158 (325)
+..-.--.+.+|+ + -++.+.|.-...-..|++.-... .++.++ +|.|+|+ |.+|.-++.
T Consensus 108 ~~~gvtaIayETV~~~~g~lPlLaPMSeVAGrla~q~Ga~~lek~~GG~GvllgGvpGV~~~-kv~iiGG-GvvgtnaAk 185 (371)
T COG0686 108 LKSGVTAIAYETVQLPDGNLPLLAPMSEVAGRLAAQAGAYYLEKTNGGKGVLLGGVPGVLPA-KVVVLGG-GVVGTNAAK 185 (371)
T ss_pred HHcCcceEEEEEEEcCCCCCcccchHHHHhhhHHHHHHHHHHHhccCCceeEecCCCCCCCc-cEEEECC-ccccchHHH
Confidence 0000001122333 1 22344443333344444421111 122333 4777887 999999999
Q ss_pred HHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEeCCC--hH-----HHHHhhcccc
Q 020487 159 MGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILDCMG--AS-----YFQRNLGSLN 229 (325)
Q Consensus 159 ~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g--~~-----~~~~~~~~l~ 229 (325)
+|..+|++|++.+.+..|++.+..+-... .+-++...+ .+.. +..|++|.++= ++ .+++.++.|+
T Consensus 186 iA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~i----ee~v--~~aDlvIgaVLIpgakaPkLvt~e~vk~Mk 259 (371)
T COG0686 186 IAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNI----EEAV--KKADLVIGAVLIPGAKAPKLVTREMVKQMK 259 (371)
T ss_pred HHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHH----HHHh--hhccEEEEEEEecCCCCceehhHHHHHhcC
Confidence 99999999999999999999888643333 333333333 3332 25799998752 21 2578899999
Q ss_pred CCCEEEEEeccCCc
Q 020487 230 IDGRLFIIGTQGGA 243 (325)
Q Consensus 230 ~~g~~v~~g~~~~~ 243 (325)
||+.+|++..-.+.
T Consensus 260 pGsVivDVAiDqGG 273 (371)
T COG0686 260 PGSVIVDVAIDQGG 273 (371)
T ss_pred CCcEEEEEEEcCCC
Confidence 99999988654443
No 206
>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1.4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....
Probab=96.92 E-value=0.0035 Score=49.64 Aligned_cols=97 Identities=19% Similarity=0.187 Sum_probs=67.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC-----------------CchHHHHHHH
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-----------------TEDFVARVKE 202 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-----------------~~~~~~~~~~ 202 (325)
.-+++|+|+ |.+|..++++++.+|++|++.+...++.+..+..++..+.... -......+.+
T Consensus 20 p~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 20 PAKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp T-EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHHHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred CeEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhhcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 467999998 9999999999999999999999999888888877765433210 1223344444
Q ss_pred HhCCCcccEEEeCC--Ch---HH--HHHhhccccCCCEEEEEec
Q 020487 203 ETGGKGVDVILDCM--GA---SY--FQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 203 ~~~~~~~d~vi~~~--g~---~~--~~~~~~~l~~~g~~v~~g~ 239 (325)
... .+|++|.+. .+ +. ....++.|+++..++++..
T Consensus 99 ~i~--~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~ 140 (168)
T PF01262_consen 99 FIA--PADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISC 140 (168)
T ss_dssp HHH--H-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTG
T ss_pred HHh--hCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEe
Confidence 443 579988543 12 11 3677888999999998844
No 207
>PRK06500 short chain dehydrogenase; Provisional
Probab=96.92 E-value=0.007 Score=50.98 Aligned_cols=78 Identities=26% Similarity=0.400 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE-EE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV-CI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
++.+++|+|++|.+|..+++.+...|++|++++++++...... +++... .+ |..+.... +.+.+..+ ++|
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id 82 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFG--RLD 82 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 4678999999999999999999999999999998876655443 455432 22 22222212 22222222 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (249)
T PRK06500 83 AVFINAGV 90 (249)
T ss_pred EEEECCCC
Confidence 99998873
No 208
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.92 E-value=0.0026 Score=58.91 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=65.4
Q ss_pred hhcCCCCCCEEE----EEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCC
Q 020487 133 MTSHLSPGESFL----VHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGK 207 (325)
Q Consensus 133 ~~~~~~~~~~vl----i~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (325)
...++++|+++| ++|++|.+|.+++++++..|++|+.+...+.+....+..+.+ .++|.+...+.+.+....
T Consensus 27 ~l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~~~--- 103 (450)
T PRK08261 27 PLRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGWGDRFGALVFDATGITDPADLKALY--- 103 (450)
T ss_pred cccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCcCCcccEEEEECCCCCCHHHHHHHH---
Confidence 445678899988 888889999999999999999999987665533333333333 355555444444443321
Q ss_pred cccEEEeCCChHHHHHhhccccCCCEEEEEeccCC
Q 020487 208 GVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 208 ~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~ 242 (325)
..+...++.|.++|+++.++....
T Consensus 104 -----------~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 104 -----------EFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred -----------HHHHHHHHhccCCCEEEEEccccc
Confidence 234566778888899988876543
No 209
>PRK06180 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0075 Score=51.87 Aligned_cols=78 Identities=27% Similarity=0.323 Sum_probs=53.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEE--eCCCchHHHH----HHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCI--NYKTEDFVAR----VKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~~~~~----~~~~~~~~~~d 210 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+.... ..+ |-.+...... +.+..+ ++|
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~--~~d 80 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFG--PID 80 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence 357899999999999999999999999999999998877665543221 122 3333222212 222222 589
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 81 ~vv~~ag~ 88 (277)
T PRK06180 81 VLVNNAGY 88 (277)
T ss_pred EEEECCCc
Confidence 99999875
No 210
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=96.90 E-value=0.014 Score=46.10 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=61.9
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHH
Q 020487 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVAR 199 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 199 (325)
.|+....+...+.....--.+.+++|+|++..+|..++..+...|++|+++.++.+ +
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~-----------------------~ 80 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTK-----------------------N 80 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCch-----------------------h
Confidence 34433344443433322246899999999334699899999999999988886531 1
Q ss_pred HHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 200 VKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 200 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+... .+|+||.+++.+.+ --.+.++++-.+++++.+.
T Consensus 81 l~~~l~--~aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 81 LKEHTK--QADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHHh--hCCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 222222 58999999998653 2223567777777887654
No 211
>PRK06194 hypothetical protein; Provisional
Probab=96.90 E-value=0.0073 Score=52.17 Aligned_cols=77 Identities=19% Similarity=0.367 Sum_probs=50.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCCE-EEeCC--CchHHHH----HHHHhCCCc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGADV-CINYK--TEDFVAR----VKEETGGKG 208 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~~-~~~~~--~~~~~~~----~~~~~~~~~ 208 (325)
+.++||+|++|.+|..+++.+...|++|++++++.+..+... + .+... .+..+ +...... +.+.. .+
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~--g~ 83 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERF--GA 83 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 578999999999999999999999999999998876554332 2 23321 23222 2211111 12222 25
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++.+.|.
T Consensus 84 id~vi~~Ag~ 93 (287)
T PRK06194 84 VHLLFNNAGV 93 (287)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 212
>PRK05854 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.0068 Score=53.24 Aligned_cols=80 Identities=19% Similarity=0.282 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchHHHHHHHHh--CCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDFVARVKEET--GGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~~~~~~~~~--~~~ 207 (325)
.+.+++|+|+++++|..++..+...|++|++++++.++.+.+. ++ +.. ..+ |-.+......+.+.. ...
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~ 92 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR 92 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 3689999999999999999999999999999999887654432 11 111 122 333322222222211 123
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|++|+++|.
T Consensus 93 ~iD~li~nAG~ 103 (313)
T PRK05854 93 PIHLLINNAGV 103 (313)
T ss_pred CccEEEECCcc
Confidence 68999998873
No 213
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.88 E-value=0.019 Score=48.89 Aligned_cols=77 Identities=18% Similarity=0.348 Sum_probs=48.6
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh---hhHHHHH-Hc-CCC-EE--EeCCCchHH----HHHHHHh
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE---EKLAVCK-DL-GAD-VC--INYKTEDFV----ARVKEET 204 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~---~~~~~~~-~~-g~~-~~--~~~~~~~~~----~~~~~~~ 204 (325)
.+.+++|+|++ +++|.++++.+...|++|+++.++. ++.+.+. ++ +.. .. .|-.+.... +.+.+..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 47889999996 7999999999999999999987653 2333332 33 221 12 233332222 2222223
Q ss_pred CCCcccEEEeCCC
Q 020487 205 GGKGVDVILDCMG 217 (325)
Q Consensus 205 ~~~~~d~vi~~~g 217 (325)
+ .+|++++|.|
T Consensus 86 g--~ld~lv~nag 96 (257)
T PRK08594 86 G--VIHGVAHCIA 96 (257)
T ss_pred C--CccEEEECcc
Confidence 3 6899998876
No 214
>PRK05867 short chain dehydrogenase; Provisional
Probab=96.87 E-value=0.0077 Score=51.00 Aligned_cols=78 Identities=24% Similarity=0.329 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-E--EeCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-C--INYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~--~~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+. ..+... . .|..+... .+.+.+..+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 85 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELG-- 85 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhC--
Confidence 4789999999999999999999999999999999887665443 223221 2 23333222 222223333
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|+++.+.|.
T Consensus 86 ~id~lv~~ag~ 96 (253)
T PRK05867 86 GIDIAVCNAGI 96 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 215
>PRK08267 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0086 Score=50.90 Aligned_cols=78 Identities=23% Similarity=0.312 Sum_probs=52.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cC-CC-EE--EeCCCchHHHHH-HHHhC--CCcccEE
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LG-AD-VC--INYKTEDFVARV-KEETG--GKGVDVI 212 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g-~~-~~--~~~~~~~~~~~~-~~~~~--~~~~d~v 212 (325)
.++||+|++|.+|..+++.+...|++|++++++.+..+.+.. .+ .. .+ .|-.+......+ .+... ..++|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 469999999999999999999999999999998887766543 32 11 22 233332222222 22211 2368999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
+.|+|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999874
No 216
>PRK08628 short chain dehydrogenase; Provisional
Probab=96.85 E-value=0.0074 Score=51.21 Aligned_cols=77 Identities=16% Similarity=0.213 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCch-HH---HHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTED-FV---ARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~-~~---~~~~~~~~~~~ 208 (325)
.+.+++|+|++|.+|..+++.+...|++|+++++++++.+..++ .+.. ..+ |..+.. .. +.+.+.. .+
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 83 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKF--GR 83 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhc--CC
Confidence 36789999999999999999999999999999988776533332 3332 222 222222 11 1222222 26
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|++|.+.|
T Consensus 84 id~vi~~ag 92 (258)
T PRK08628 84 IDGLVNNAG 92 (258)
T ss_pred CCEEEECCc
Confidence 899999988
No 217
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.84 E-value=0.0078 Score=50.74 Aligned_cols=80 Identities=25% Similarity=0.326 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC--CC-EEE--eCCCchHHHHH-HHH-hCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG--AD-VCI--NYKTEDFVARV-KEE-TGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g--~~-~~~--~~~~~~~~~~~-~~~-~~~~~~d 210 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. .+. .. ..+ |..+......+ .+. .....+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 3578999999999999999999999999999999987765543 222 11 122 22222222222 111 1112689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
No 218
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.84 E-value=0.0083 Score=50.81 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=51.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCCE-E--EeCCCchHHHHHH----HHhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGADV-C--INYKTEDFVARVK----EETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~~-~--~~~~~~~~~~~~~----~~~~~~~~ 209 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.++... .+..++.+.+. . .|-.+......+. +..+ ++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~i 84 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMG--HI 84 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcC--CC
Confidence 47899999999999999999999999999998875432 22333444332 2 2333332222222 2233 68
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++++.|.
T Consensus 85 D~lv~~ag~ 93 (251)
T PRK12481 85 DILINNAGI 93 (251)
T ss_pred CEEEECCCc
Confidence 999999873
No 219
>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.84 E-value=0.021 Score=50.10 Aligned_cols=99 Identities=23% Similarity=0.188 Sum_probs=67.5
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
+...++++++||.+|+ | .|..++.+++..+. +|++++.+++..+.++ ..|.+.+.....+ ..... ...
T Consensus 74 ~~L~i~~g~~VLDIG~-G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD-~~~~~---~~~ 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGD-GYYGV---PEF 147 (322)
T ss_pred HhcCCCCCCEEEEEeC-C-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCC-hhhcc---ccc
Confidence 4556789999999997 5 59999999988763 6999998888665544 3565443322221 11111 112
Q ss_pred CcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487 207 KGVDVILDCMGASYF-QRNLGSLNIDGRLFII 237 (325)
Q Consensus 207 ~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~ 237 (325)
..||+|+.+.+.... ...++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 369999998886543 4567889999998764
No 220
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.82 E-value=0.041 Score=44.61 Aligned_cols=77 Identities=26% Similarity=0.354 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-c----CCCEE-EeCCCchHHHHHHHHhCCCcccEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L----GADVC-INYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~----g~~~~-~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
.+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+.+ + +.... .+..+ .+.+.+.. .++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~---~~~~~~~~--~~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSD---DAARAAAI--KGADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCC---HHHHHHHH--hcCCEE
Confidence 46799999999999999998888889999999999877655432 2 22211 12222 22223333 268999
Q ss_pred EeCCChHH
Q 020487 213 LDCMGASY 220 (325)
Q Consensus 213 i~~~g~~~ 220 (325)
|.+.+...
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99887544
No 221
>PRK07478 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.012 Score=49.93 Aligned_cols=78 Identities=28% Similarity=0.473 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..++..+...|++|+++++++++.+.+. ..+.+. .+ |..+... .+.+.+..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFG-- 82 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcC--
Confidence 3678999999999999999999999999999999887765443 233322 22 3223222 222222232
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|+++.++|.
T Consensus 83 ~id~li~~ag~ 93 (254)
T PRK07478 83 GLDIAFNNAGT 93 (254)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 222
>PRK07890 short chain dehydrogenase; Provisional
Probab=96.80 E-value=0.0097 Score=50.44 Aligned_cols=78 Identities=24% Similarity=0.351 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGAD-VCI--NYKTEDFV----ARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~~-~~~--~~~~~~~~----~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..++..+...|++|+++.+++++.+.+. + .+.. ..+ |..+.... +.+.+..+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-- 81 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG-- 81 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC--
Confidence 4678999999999999999999999999999998887654443 2 2322 122 32222211 22222233
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|++|.+.|.
T Consensus 82 ~~d~vi~~ag~ 92 (258)
T PRK07890 82 RVDALVNNAFR 92 (258)
T ss_pred CccEEEECCcc
Confidence 58999998863
No 223
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.80 E-value=0.0091 Score=50.61 Aligned_cols=77 Identities=22% Similarity=0.286 Sum_probs=50.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC--EEE--eCCCchH----HHHHHHHhCCCc
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD--VCI--NYKTEDF----VARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~--~~~--~~~~~~~----~~~~~~~~~~~~ 208 (325)
.+++++|+|++ +++|.++++.+...|++|+++.++++..+.++++... ..+ |-.+... .+.+.+..+ .
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g--~ 83 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVG--K 83 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhC--C
Confidence 47899999998 6999999999999999999998875433444443221 122 3222222 222333333 6
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|+++++.|
T Consensus 84 iD~lv~nAg 92 (252)
T PRK06079 84 IDGIVHAIA 92 (252)
T ss_pred CCEEEEccc
Confidence 899999887
No 224
>TIGR00438 rrmJ cell division protein FtsJ.
Probab=96.80 E-value=0.032 Score=44.97 Aligned_cols=99 Identities=18% Similarity=0.235 Sum_probs=61.3
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcCCCEE-EeCCCchHHHHHHHHhCCCccc
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLGADVC-INYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d 210 (325)
...++++++||.+|+ |.-+ .+..+++.. ..+|++++.++.. ...+...+ .+.........+.+.+...++|
T Consensus 27 ~~~i~~g~~VLDiG~-GtG~-~~~~l~~~~~~~~~v~~vDis~~~----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D 100 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-APGG-WSQVAVEQVGGKGRVIAVDLQPMK----PIENVDFIRGDFTDEEVLNKIRERVGDDKVD 100 (188)
T ss_pred hcccCCCCEEEEecC-CCCH-HHHHHHHHhCCCceEEEEeccccc----cCCCceEEEeeCCChhHHHHHHHHhCCCCcc
Confidence 345689999999997 4434 444444443 3489999988754 11233222 1322333344555556666899
Q ss_pred EEEeCC-----C-------------hHHHHHhhccccCCCEEEEEe
Q 020487 211 VILDCM-----G-------------ASYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 211 ~vi~~~-----g-------------~~~~~~~~~~l~~~g~~v~~g 238 (325)
+|+... | ...+..+.+.|+++|+++...
T Consensus 101 ~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 101 VVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred EEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999521 2 123567788999999999864
No 225
>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]
Probab=96.80 E-value=0.028 Score=44.53 Aligned_cols=99 Identities=20% Similarity=0.275 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCCCEE--EeCCCchHHHHHHHHhC
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVC--INYKTEDFVARVKEETG 205 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~--~~~~~~~~~~~~~~~~~ 205 (325)
.+..++||+.++=.|+ +.|...++++... ..+|+++.+++++.+..+ ++|.+.+ +...... .+. +
T Consensus 28 s~L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~---~L~---~ 99 (187)
T COG2242 28 SKLRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPE---ALP---D 99 (187)
T ss_pred HhhCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchH---hhc---C
Confidence 3457799998888887 2466667777443 469999999999876654 5787643 3222221 221 2
Q ss_pred CCcccEEEeCCCh---HHHHHhhccccCCCEEEEEec
Q 020487 206 GKGVDVILDCMGA---SYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 206 ~~~~d~vi~~~g~---~~~~~~~~~l~~~g~~v~~g~ 239 (325)
...+|.+|---|. ..++..++.|+++|++|.-..
T Consensus 100 ~~~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~nai 136 (187)
T COG2242 100 LPSPDAIFIGGGGNIEEILEAAWERLKPGGRLVANAI 136 (187)
T ss_pred CCCCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEee
Confidence 2258999866553 236888999999999997654
No 226
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=96.79 E-value=0.0094 Score=52.52 Aligned_cols=79 Identities=23% Similarity=0.344 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC---CC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---AD-VCI--NYKTEDFVARVKEET--GGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~-~~~--~~~~~~~~~~~~~~~--~~~~~ 209 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ++. .. ..+ |-.+......+.+.. ....+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 4678999999999999999999989999999999887665443 332 11 122 333322222222211 12358
Q ss_pred cEEEeCCC
Q 020487 210 DVILDCMG 217 (325)
Q Consensus 210 d~vi~~~g 217 (325)
|++|+++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999987
No 227
>PRK12937 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.026 Score=47.40 Aligned_cols=36 Identities=25% Similarity=0.316 Sum_probs=31.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
++.+++|+|++|.+|..+++.+...|++++++.++.
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~ 39 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGS 39 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCC
Confidence 467899999999999999999999999998877654
No 228
>PRK07576 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.012 Score=50.28 Aligned_cols=79 Identities=23% Similarity=0.287 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHH-HHHHh-CCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVAR-VKEET-GGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~-~~~~~-~~~~~ 209 (325)
++.+++|+|++|.+|..+++.+...|++|+++.++.++.+... ..+.. ..+ |-.+...... +.+.. ...++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5789999999999999999999999999999998877654332 22322 222 3332222222 22211 11268
Q ss_pred cEEEeCCC
Q 020487 210 DVILDCMG 217 (325)
Q Consensus 210 d~vi~~~g 217 (325)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998875
No 229
>PRK04148 hypothetical protein; Provisional
Probab=96.78 E-value=0.016 Score=43.47 Aligned_cols=80 Identities=15% Similarity=0.081 Sum_probs=56.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
.++.++++.|. | .|..++..+...|.+|++++.++...+.+++.+.+.+.+.-..... . +. +++|++..+-.
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~-~---~y--~~a~liysirp 86 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAKKLGLNAFVDDLFNPNL-E---IY--KNAKLIYSIRP 86 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCCeEEECcCCCCCH-H---HH--hcCCEEEEeCC
Confidence 45688999998 6 8876777777889999999999999998888876655432221111 1 11 26888988887
Q ss_pred hHHHHHhh
Q 020487 218 ASYFQRNL 225 (325)
Q Consensus 218 ~~~~~~~~ 225 (325)
...++..+
T Consensus 87 p~el~~~~ 94 (134)
T PRK04148 87 PRDLQPFI 94 (134)
T ss_pred CHHHHHHH
Confidence 76654333
No 230
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=96.77 E-value=0.0031 Score=51.62 Aligned_cols=109 Identities=20% Similarity=0.197 Sum_probs=67.0
Q ss_pred CcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEE-EeCC
Q 020487 120 FPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVC-INYK 192 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~-~~~~ 192 (325)
+..+...|. +.+...++||++||-+|+ +.|+.++-+++..|. +|+.+...++-.+.++ .++.+.+ +...
T Consensus 55 is~P~~~a~--~l~~L~l~pg~~VLeIGt--GsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~g 130 (209)
T PF01135_consen 55 ISAPSMVAR--MLEALDLKPGDRVLEIGT--GSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVG 130 (209)
T ss_dssp E--HHHHHH--HHHHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES
T ss_pred chHHHHHHH--HHHHHhcCCCCEEEEecC--CCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEc
Confidence 333444444 346677999999999996 457888888887764 6899998877554443 4555432 2111
Q ss_pred CchHHHHHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEE
Q 020487 193 TEDFVARVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFII 237 (325)
Q Consensus 193 ~~~~~~~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~ 237 (325)
+... -+....+||.|+-+.+.+.. ...+++|++||++|..
T Consensus 131 dg~~-----g~~~~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 131 DGSE-----GWPEEAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp -GGG-----TTGGG-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred chhh-----ccccCCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 1110 01112379999998887654 5678999999999985
No 231
>PRK06398 aldose dehydrogenase; Validated
Probab=96.76 E-value=0.0015 Score=55.66 Aligned_cols=72 Identities=24% Similarity=0.369 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHH----HHHHhCCCcccEEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVAR----VKEETGGKGVDVIL 213 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~----~~~~~~~~~~d~vi 213 (325)
.+.++||+|+++.+|.+++..+...|++|+++.+++.+.. ... ...|-.+...... +.+..+ .+|+++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~-----~~~~~~~D~~~~~~i~~~~~~~~~~~~--~id~li 77 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYN-----DVDYFKVDVSNKEQVIKGIDYVISKYG--RIDILV 77 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccC-----ceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 3679999999999999999999999999999998764422 111 1123333222222 222222 589999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
++.|
T Consensus 78 ~~Ag 81 (258)
T PRK06398 78 NNAG 81 (258)
T ss_pred ECCC
Confidence 9887
No 232
>PRK06720 hypothetical protein; Provisional
Probab=96.75 E-value=0.022 Score=45.03 Aligned_cols=78 Identities=24% Similarity=0.383 Sum_probs=50.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EEeCC--CchHHHH----HHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CINYK--TEDFVAR----VKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~~~~--~~~~~~~----~~~~~~~~ 207 (325)
.+..++|+|+++++|..++..+...|++|+++.++.+..+.. .+.+... .+..+ ....... +.+..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G-- 92 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFS-- 92 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 478999999999999999999988999999999887655332 2234332 22222 2111111 122222
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|+++++.|.
T Consensus 93 ~iDilVnnAG~ 103 (169)
T PRK06720 93 RIDMLFQNAGL 103 (169)
T ss_pred CCCEEEECCCc
Confidence 58999988874
No 233
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.74 E-value=0.016 Score=48.17 Aligned_cols=75 Identities=17% Similarity=0.265 Sum_probs=51.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVC-INYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+++|+|+++.+|..+++.+...|++|+++.++.++.+.+. +++...+ .|-.+......+.+...+ .+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~-~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPH-HLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhh-cCcEEEECCC
Confidence 5899999999999999999989999999999887765543 4444322 233333333333333322 5899998864
No 234
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=96.74 E-value=0.015 Score=49.64 Aligned_cols=105 Identities=21% Similarity=0.277 Sum_probs=73.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcC-CC----EEEeCCC----chHHHHHHHHhCCCc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLG-AD----VCINYKT----EDFVARVKEETGGKG 208 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g-~~----~~~~~~~----~~~~~~~~~~~~~~~ 208 (325)
..+..|+|+|+.+++|..++.-+...|.+|++.+.+++..+.++..- .. ..+|-.. ....+.+++..+..+
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 34667999999999999999999999999999998877766655321 11 1233232 234566667788888
Q ss_pred ccEEEeCCChH---------------------------HHHHhhcccc-CCCEEEEEeccCC
Q 020487 209 VDVILDCMGAS---------------------------YFQRNLGSLN-IDGRLFIIGTQGG 242 (325)
Q Consensus 209 ~d~vi~~~g~~---------------------------~~~~~~~~l~-~~g~~v~~g~~~~ 242 (325)
...+++++|.. .....+..++ ..||+|.+++..+
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~G 168 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLG 168 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEeccccc
Confidence 99999999821 1123334443 4699999877665
No 235
>PRK07063 short chain dehydrogenase; Provisional
Probab=96.73 E-value=0.013 Score=49.84 Aligned_cols=78 Identities=23% Similarity=0.329 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc-----CCC-EEE--eCCCchH----HHHHHHHhC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL-----GAD-VCI--NYKTEDF----VARVKEETG 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~-----g~~-~~~--~~~~~~~----~~~~~~~~~ 205 (325)
.+.+++|+|+++.+|..+++.+...|++|+++++++++.+... ++ +.. ..+ |..+... .+.+.+..+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3678999999999999999999999999999998877665443 22 221 122 2222221 222222333
Q ss_pred CCcccEEEeCCCh
Q 020487 206 GKGVDVILDCMGA 218 (325)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (325)
.+|+++.+.|.
T Consensus 86 --~id~li~~ag~ 96 (260)
T PRK07063 86 --PLDVLVNNAGI 96 (260)
T ss_pred --CCcEEEECCCc
Confidence 68999999873
No 236
>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.72 E-value=0.015 Score=47.89 Aligned_cols=98 Identities=20% Similarity=0.098 Sum_probs=65.6
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHH
Q 020487 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEE 203 (325)
Q Consensus 132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~ 203 (325)
.....++++++||-+|+ +.|..++.+++..+ .+|+.++.+++-.+.+++ .+... ++..+.... .
T Consensus 69 ~~~l~~~~g~~VLdIG~--GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~------~ 140 (212)
T PRK13942 69 CELLDLKEGMKVLEIGT--GSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLG------Y 140 (212)
T ss_pred HHHcCCCCcCEEEEECC--cccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccC------C
Confidence 35667899999999996 45777777887765 599999999887766553 44332 222222110 1
Q ss_pred hCCCcccEEEeCCChH-HHHHhhccccCCCEEEEE
Q 020487 204 TGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 204 ~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (325)
.....||.|+-+.... ......+.|++||+++..
T Consensus 141 ~~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 141 EENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred CcCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 1234799997655433 346677899999998875
No 237
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.72 E-value=0.013 Score=49.13 Aligned_cols=80 Identities=21% Similarity=0.339 Sum_probs=51.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-E--EeCCCch-HHHHHHHHhC-CCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-C--INYKTED-FVARVKEETG-GKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~--~~~~~~~-~~~~~~~~~~-~~~~ 209 (325)
++.+++|+|++|.+|..+++.+...|++|+++.++.++.+.. +..+... . .|..+.. ....+.+... -..+
T Consensus 4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999999999999999999987765433 2334322 2 2333322 2222222110 1257
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|.++.++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999998854
No 238
>PRK06172 short chain dehydrogenase; Provisional
Probab=96.72 E-value=0.011 Score=50.00 Aligned_cols=78 Identities=21% Similarity=0.334 Sum_probs=52.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.. ++.+.. ..+ |..+... .+.+.+..+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-- 83 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYG-- 83 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 368999999999999999999999999999999988765433 233332 222 2222221 222233333
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|+++.+.|.
T Consensus 84 ~id~li~~ag~ 94 (253)
T PRK06172 84 RLDYAFNNAGI 94 (253)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 239
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.72 E-value=0.027 Score=47.44 Aligned_cols=101 Identities=20% Similarity=0.297 Sum_probs=61.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhH----HHHHHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKL----AVCKDLGAD-VCI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~----~~~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
+.++||+|++|.+|..+++.+...|++|+.+.++. +.. ...++.+.. ..+ |...... .+.+.+..+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYG-- 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcC--
Confidence 67899999999999999998889999988776542 222 122333332 122 2222221 122222232
Q ss_pred cccEEEeCCCh----------H-H---------------HHHhhccccCCCEEEEEeccCC
Q 020487 208 GVDVILDCMGA----------S-Y---------------FQRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 208 ~~d~vi~~~g~----------~-~---------------~~~~~~~l~~~g~~v~~g~~~~ 242 (325)
.+|.+|.+.|. . . ...+.+.+++.|+++.++....
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 68999999873 0 0 1233445567789998876553
No 240
>PRK09072 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0095 Score=50.77 Aligned_cols=80 Identities=21% Similarity=0.321 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-c--CCC-EEE--eCCCchHHHHHHHH-hCCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-L--GAD-VCI--NYKTEDFVARVKEE-TGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~--g~~-~~~--~~~~~~~~~~~~~~-~~~~~~d~ 211 (325)
++.+++|+|++|.+|..++..+...|++|+++++++++.+.+.+ + +.. ..+ |..+......+.+. .....+|.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~ 83 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV 83 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence 46789999999999999999999999999999999877655542 2 211 122 22232222222221 11236899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++.+.|.
T Consensus 84 lv~~ag~ 90 (263)
T PRK09072 84 LINNAGV 90 (263)
T ss_pred EEECCCC
Confidence 9999874
No 241
>PRK06181 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.011 Score=50.39 Aligned_cols=78 Identities=19% Similarity=0.354 Sum_probs=50.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCch-HHHHHHHHhC-CCcccE
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTED-FVARVKEETG-GKGVDV 211 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~-~~~~~~~~~~-~~~~d~ 211 (325)
.++||+|++|.+|..+++.+...|++|++++++..+.+.+. ..+... ++ |..+.. ....+.+... ..++|.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999999999999999999876654332 233322 22 222222 1111221110 125899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++.|.|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999864
No 242
>PRK07062 short chain dehydrogenase; Provisional
Probab=96.71 E-value=0.0088 Score=51.00 Aligned_cols=78 Identities=31% Similarity=0.433 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----Hc-CCCE--E--EeCCCchHHHH----HHHHhC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GADV--C--INYKTEDFVAR----VKEETG 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~-g~~~--~--~~~~~~~~~~~----~~~~~~ 205 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.++.++.+... +. +... . .|-.+...... +.+..+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4789999999999999999999999999999999887665432 11 1112 1 23333222222 222233
Q ss_pred CCcccEEEeCCCh
Q 020487 206 GKGVDVILDCMGA 218 (325)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (325)
.+|++++++|.
T Consensus 87 --~id~li~~Ag~ 97 (265)
T PRK07062 87 --GVDMLVNNAGQ 97 (265)
T ss_pred --CCCEEEECCCC
Confidence 68999999873
No 243
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.71 E-value=0.018 Score=49.00 Aligned_cols=77 Identities=22% Similarity=0.259 Sum_probs=49.8
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChhhH---HHH-HHcCCCEEEeCC--Cch----HHHHHHHHhCC
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVC-KDLGADVCINYK--TED----FVARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~~~---~~~-~~~g~~~~~~~~--~~~----~~~~~~~~~~~ 206 (325)
.+.+++|+|++ +++|.++++.+...|++|+++.++++.. +.+ ++++....+..+ +.. +.+.+.+..+
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g- 87 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWG- 87 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcC-
Confidence 47899999997 4899999999999999999998875432 222 233432333222 222 2222223333
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 88 -~ld~lv~nAg 97 (258)
T PRK07533 88 -RLDFLLHSIA 97 (258)
T ss_pred -CCCEEEEcCc
Confidence 6899999886
No 244
>PRK05876 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.013 Score=50.43 Aligned_cols=77 Identities=26% Similarity=0.351 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|.+++..+...|++|+++.++.++.+... ..+... .+ |-.+... .+.+.+..+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g-- 82 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLG-- 82 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcC--
Confidence 4678999999999999999999999999999998876655432 233322 22 2222221 122222232
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
.+|++|++.|
T Consensus 83 ~id~li~nAg 92 (275)
T PRK05876 83 HVDVVFSNAG 92 (275)
T ss_pred CCCEEEECCC
Confidence 5899999987
No 245
>PRK06484 short chain dehydrogenase; Validated
Probab=96.70 E-value=0.0097 Score=56.19 Aligned_cols=78 Identities=27% Similarity=0.388 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE---EEeCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---CINYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---~~~~~~~~~~----~~~~~~~~~~~~d 210 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.++.++.+.+. +++... ..|..+.... +.+.+..+ ++|
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~iD 81 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFG--RID 81 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhC--CCC
Confidence 5789999999999999999999999999999999888765543 455432 2233332222 22222233 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++++.|.
T Consensus 82 ~li~nag~ 89 (520)
T PRK06484 82 VLVNNAGV 89 (520)
T ss_pred EEEECCCc
Confidence 99999763
No 246
>PRK07677 short chain dehydrogenase; Provisional
Probab=96.70 E-value=0.017 Score=48.84 Aligned_cols=76 Identities=22% Similarity=0.430 Sum_probs=51.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGKG 208 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~ 208 (325)
+.+++|+|+++.+|..+++.+...|++|++++++.++.+.+. +.+.. ..+ |-.+..... .+.+..+ .
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 78 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFG--R 78 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC--C
Confidence 468999999999999999999999999999998877655443 22222 223 322322222 2222223 5
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|+++++.|
T Consensus 79 id~lI~~ag 87 (252)
T PRK07677 79 IDALINNAA 87 (252)
T ss_pred ccEEEECCC
Confidence 899999886
No 247
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=96.69 E-value=0.013 Score=49.66 Aligned_cols=76 Identities=21% Similarity=0.447 Sum_probs=51.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFVA----RVKEETGGKGVDV 211 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~~d~ 211 (325)
+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. +++.. ..+ |-.+..... .+.+..+ .+|+
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~ 83 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFG--GIDI 83 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence 678999999999999999999999999999999888765544 33322 122 222222222 2222222 6899
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
++.+.|
T Consensus 84 li~~ag 89 (257)
T PRK07067 84 LFNNAA 89 (257)
T ss_pred EEECCC
Confidence 999876
No 248
>PRK12828 short chain dehydrogenase; Provisional
Probab=96.69 E-value=0.013 Score=48.90 Aligned_cols=78 Identities=19% Similarity=0.315 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH----HHHcCCCEE-EeCCCchHH----HHHHHHhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV----CKDLGADVC-INYKTEDFV----ARVKEETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~----~~~~g~~~~-~~~~~~~~~----~~~~~~~~~~~~ 209 (325)
++.++||+|++|.+|..+++.+...|++|++++++.++... ....+...+ .|-.+.... +.+.+..+ ++
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~ 83 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFG--RL 83 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhC--Cc
Confidence 37899999999999999999998889999999987765432 222333221 222222211 22222233 68
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (239)
T PRK12828 84 DALVNIAGA 92 (239)
T ss_pred CEEEECCcc
Confidence 999998763
No 249
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=96.69 E-value=0.015 Score=49.46 Aligned_cols=78 Identities=31% Similarity=0.441 Sum_probs=52.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~ 207 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+... ..+.. ..+ |..+.... ..+.+.. .
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~--~ 88 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERF--G 88 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHh--C
Confidence 4789999999999999999999999999999999887655443 22322 122 33332222 2222222 2
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|.++.+.|.
T Consensus 89 ~id~vi~~ag~ 99 (259)
T PRK08213 89 HVDILVNNAGA 99 (259)
T ss_pred CCCEEEECCCC
Confidence 68999999873
No 250
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=96.69 E-value=0.013 Score=49.67 Aligned_cols=80 Identities=23% Similarity=0.291 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET--GGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~--~~~~~ 209 (325)
.+.++||+|++|.+|..+++.+...|++|+++.+++++.+... +.|.. ..+ |..+......+.+.. ....+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4789999999999999999999889999999998877654332 22322 122 333322222222211 11268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|.+.|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999874
No 251
>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A ....
Probab=96.68 E-value=0.006 Score=44.46 Aligned_cols=91 Identities=24% Similarity=0.316 Sum_probs=61.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHH-HCCCEEEEEecChhhHHHHHHc----CC-CE--EEeCCCchHHHHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGK-CQGVRVFVTAGSEEKLAVCKDL----GA-DV--CINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~-~~g~~v~~~~~~~~~~~~~~~~----g~-~~--~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
|+.+||-+|+ +.|..+..+++ ..+++|++++.+++..+.+++. +. +. ++..+. . .......+||
T Consensus 1 p~~~vLDlGc--G~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~-~-----~~~~~~~~~D 72 (112)
T PF12847_consen 1 PGGRVLDLGC--GTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDA-E-----FDPDFLEPFD 72 (112)
T ss_dssp TTCEEEEETT--TTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCC-H-----GGTTTSSCEE
T ss_pred CCCEEEEEcC--cCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECcc-c-----cCcccCCCCC
Confidence 6889999997 45888888888 4689999999999988776632 21 22 222222 1 1112233699
Q ss_pred EEEeCC-Ch----HH------HHHhhccccCCCEEEEE
Q 020487 211 VILDCM-GA----SY------FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 211 ~vi~~~-g~----~~------~~~~~~~l~~~g~~v~~ 237 (325)
+|+... .. .. +..+.+.|+|||+++.-
T Consensus 73 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 73 LVICSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp EEEECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 999877 22 12 56778899999999863
No 252
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=96.67 E-value=0.013 Score=49.41 Aligned_cols=77 Identities=23% Similarity=0.369 Sum_probs=50.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCE-EE--eCCCchHHHHHHH-HhC-CCcccEEEeC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CI--NYKTEDFVARVKE-ETG-GKGVDVILDC 215 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~--~~~~~~~~~~~~~-~~~-~~~~d~vi~~ 215 (325)
+++|+|++|.+|..++..+...|++|+++++++++.+.+.. ++... .+ |-.+......+.+ ... ..++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 68999999999999999999999999999999887665543 34321 22 2222221222211 111 1268999998
Q ss_pred CCh
Q 020487 216 MGA 218 (325)
Q Consensus 216 ~g~ 218 (325)
.|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 763
No 253
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.67 E-value=0.016 Score=52.56 Aligned_cols=76 Identities=18% Similarity=0.274 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.+.+++|+|++|.+|.+++..+...|++|+++++++++.+... ..... ..+..+..+ .+.+.+..+ ++|++|.+.
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd-~~~v~~~l~--~IDiLInnA 253 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQ-EAALAELLE--KVDILIINH 253 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCC-HHHHHHHhC--CCCEEEECC
Confidence 3679999999999999999999889999999998876554322 11111 122222222 223444443 689999987
Q ss_pred C
Q 020487 217 G 217 (325)
Q Consensus 217 g 217 (325)
|
T Consensus 254 G 254 (406)
T PRK07424 254 G 254 (406)
T ss_pred C
Confidence 6
No 254
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.67 E-value=0.019 Score=48.97 Aligned_cols=77 Identities=23% Similarity=0.322 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFV----ARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~----~~~~~~~~~ 206 (325)
.+..++|+|+++ ++|.++++.+...|++|++..+++...+.++ +.+....+ |-.+.... +.+.+..+
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 85 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWG- 85 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcC-
Confidence 478899999976 7999999988889999999887643222222 23433322 33332222 22222333
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 86 -~iDilVnnag 95 (260)
T PRK06603 86 -SFDFLLHGMA 95 (260)
T ss_pred -CccEEEEccc
Confidence 6899999876
No 255
>PRK08862 short chain dehydrogenase; Provisional
Probab=96.67 E-value=0.01 Score=49.55 Aligned_cols=78 Identities=12% Similarity=0.135 Sum_probs=53.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.+++|+|+++++|.+++..+...|++|+++.++.++.+.+. +.+.+. .+ |..+... .+.+.+..+ .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFN-R 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhC-C
Confidence 4678999999999999999999999999999999888765432 334332 22 3222222 222223333 2
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 83 ~iD~li~nag 92 (227)
T PRK08862 83 APDVLVNNWT 92 (227)
T ss_pred CCCEEEECCc
Confidence 5899999986
No 256
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.66 E-value=0.02 Score=48.78 Aligned_cols=78 Identities=17% Similarity=0.250 Sum_probs=49.3
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEE--eCCCchH----HHHHHHHhCC
Q 020487 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCI--NYKTEDF----VARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~--~~~~~~~----~~~~~~~~~~ 206 (325)
.+.+++|+|+ ++++|.++++.+...|++|++..+.+...+.+++ .+....+ |-.+... .+.+.+..+
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g- 83 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWD- 83 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhC-
Confidence 4678999996 5799999999999999999998765433333322 2332233 3222222 222333333
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
++|+++++.|.
T Consensus 84 -~iD~lVnnAG~ 94 (261)
T PRK08690 84 -GLDGLVHSIGF 94 (261)
T ss_pred -CCcEEEECCcc
Confidence 69999999863
No 257
>PRK06138 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.013 Score=49.35 Aligned_cols=77 Identities=23% Similarity=0.340 Sum_probs=51.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCchHHHH----HHHHhCCCcc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVAR----VKEETGGKGV 209 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~----~~~~~~~~~~ 209 (325)
+.+++|+|++|.+|..+++.+...|++|+++.++.++..... ++ +.. ..+ |-.+...... +.+.. .++
T Consensus 5 ~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~--~~i 82 (252)
T PRK06138 5 GRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARW--GRL 82 (252)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc--CCC
Confidence 678999999999999999988888999999998877654433 22 322 222 2222222222 22222 268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.|.|.
T Consensus 83 d~vi~~ag~ 91 (252)
T PRK06138 83 DVLVNNAGF 91 (252)
T ss_pred CEEEECCCC
Confidence 999999873
No 258
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=96.65 E-value=0.021 Score=48.48 Aligned_cols=75 Identities=25% Similarity=0.348 Sum_probs=50.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCEEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADVCI--NYKTEDFVA----RVKEETGGKGVDV 211 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~~~--~~~~~~~~~----~~~~~~~~~~~d~ 211 (325)
+++|+|+++.+|.++++.+...|++|+++.+++++.+... +.+....+ |-.+..... .+.+..+ ++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g--~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLG--GIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcC--CCCE
Confidence 6899999999999999999999999999999887654432 22322233 222222222 2222223 6899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++++.|.
T Consensus 80 li~naG~ 86 (259)
T PRK08340 80 LVWNAGN 86 (259)
T ss_pred EEECCCC
Confidence 9998873
No 259
>PRK08303 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.021 Score=49.89 Aligned_cols=35 Identities=31% Similarity=0.362 Sum_probs=32.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
.+.+++|+|+++++|.++++.+...|++|+++.++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 47899999999999999999999999999999886
No 260
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=96.64 E-value=0.0096 Score=50.96 Aligned_cols=80 Identities=31% Similarity=0.407 Sum_probs=54.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC----EE--EeCCCchHHHHHHHH-hC--
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD----VC--INYKTEDFVARVKEE-TG-- 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~----~~--~~~~~~~~~~~~~~~-~~-- 205 (325)
.|..++|+|+++++|.+++..+...|++|+++.+++++.+.... .+.. .. .|-........+.+. ..
T Consensus 7 ~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~~ 86 (270)
T KOG0725|consen 7 AGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEKF 86 (270)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHHh
Confidence 57889999999999999999999999999999999998755442 2221 11 222222222222221 11
Q ss_pred CCcccEEEeCCCh
Q 020487 206 GKGVDVILDCMGA 218 (325)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (325)
..++|+++++.|.
T Consensus 87 ~GkidiLvnnag~ 99 (270)
T KOG0725|consen 87 FGKIDILVNNAGA 99 (270)
T ss_pred CCCCCEEEEcCCc
Confidence 1269999998874
No 261
>PRK06114 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.015 Score=49.21 Aligned_cols=78 Identities=24% Similarity=0.316 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HH----HHHHcCCCE-EE--eCCCch-H---HHHHHHHhCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LA----VCKDLGADV-CI--NYKTED-F---VARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~----~~~~~g~~~-~~--~~~~~~-~---~~~~~~~~~~ 206 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.++.++ .+ .++..+... .+ |-.+.. . .+.+.+..+
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g- 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG- 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 46799999999999999999999999999999876532 22 222334321 22 222222 1 122222232
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
.+|+++.|.|.
T Consensus 86 -~id~li~~ag~ 96 (254)
T PRK06114 86 -ALTLAVNAAGI 96 (254)
T ss_pred -CCCEEEECCCC
Confidence 68999999874
No 262
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.63 E-value=0.023 Score=48.84 Aligned_cols=101 Identities=19% Similarity=0.231 Sum_probs=64.5
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHH-HHcCCCEEE--eCCCchHHH----HHHHHhCC
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTEDFVA----RVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~~~~----~~~~~~~~ 206 (325)
.+.+++|+|++ +++|.++++.+...|++|+++.++++ +.+.+ ++++....+ |-.+....+ .+.+..+
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g- 82 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLG- 82 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcC-
Confidence 36899999996 69999999999999999999988753 22222 334433333 333322222 2222233
Q ss_pred CcccEEEeCCChH---------------H---------------HHHhhccccCCCEEEEEeccC
Q 020487 207 KGVDVILDCMGAS---------------Y---------------FQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 207 ~~~d~vi~~~g~~---------------~---------------~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+|+++++.|.. . ....+..|..+|+++.++...
T Consensus 83 -~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~ 146 (274)
T PRK08415 83 -KIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLG 146 (274)
T ss_pred -CCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCC
Confidence 689999998731 0 123445666789999886644
No 263
>PRK08589 short chain dehydrogenase; Validated
Probab=96.63 E-value=0.013 Score=50.26 Aligned_cols=78 Identities=22% Similarity=0.331 Sum_probs=50.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EE--EeCCCchH----HHHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VC--INYKTEDF----VARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~--~~~~~~~~----~~~~~~~~~~~~ 208 (325)
.+.++||+|+++.+|.++++.+...|++|+++.++++..+..++ .+.. .. .|-.+... .+.+.+..+ .
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIAEAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFG--R 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcC--C
Confidence 47799999999999999999999999999999988332222222 2322 12 23333222 222323333 5
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++++.|.
T Consensus 83 id~li~~Ag~ 92 (272)
T PRK08589 83 VDVLFNNAGV 92 (272)
T ss_pred cCEEEECCCC
Confidence 8999998863
No 264
>PRK07774 short chain dehydrogenase; Provisional
Probab=96.63 E-value=0.017 Score=48.68 Aligned_cols=77 Identities=18% Similarity=0.264 Sum_probs=51.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~ 207 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.++++....+. +.+.. ..+ |..+.... ..+.+..+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 82 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFG-- 82 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC--
Confidence 3678999999999999999999889999999998876554332 22222 222 32222211 22222333
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
++|++|.+.|
T Consensus 83 ~id~vi~~ag 92 (250)
T PRK07774 83 GIDYLVNNAA 92 (250)
T ss_pred CCCEEEECCC
Confidence 5899999987
No 265
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.62 E-value=0.014 Score=51.39 Aligned_cols=72 Identities=21% Similarity=0.246 Sum_probs=51.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+|+|+||+|-+|..++..+...|.+|++++|+.++.......+...+ ..+-.+ ...+.+... ++|+||.+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~~~~v~~v-~~Dl~d-~~~l~~al~--g~d~Vi~~~~ 73 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLKEWGAELV-YGDLSL-PETLPPSFK--GVTAIIDAST 73 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHhhcCCEEE-ECCCCC-HHHHHHHHC--CCCEEEECCC
Confidence 69999999999999999999999999999998766554444454332 222111 223444443 6899999875
No 266
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=96.62 E-value=0.012 Score=49.91 Aligned_cols=77 Identities=26% Similarity=0.386 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH---HcCCCE-E--EeCCCchH----HHHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DLGADV-C--INYKTEDF----VARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~---~~g~~~-~--~~~~~~~~----~~~~~~~~~~~~ 208 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.+++...+..+ ..+.+. . .|..+... .+.+.+..+ .
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 84 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFG--R 84 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcC--C
Confidence 3678999999999999999999999999999998754332222 233332 1 23333221 222222222 6
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|+++.++|
T Consensus 85 id~lv~nAg 93 (260)
T PRK12823 85 IDVLINNVG 93 (260)
T ss_pred CeEEEECCc
Confidence 899999986
No 267
>PRK06101 short chain dehydrogenase; Provisional
Probab=96.62 E-value=0.014 Score=49.10 Aligned_cols=76 Identities=16% Similarity=0.101 Sum_probs=49.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EE--EeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VC--INYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~--~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
.+++|+|++|.+|..++..+...|++|+++++++++.+.+.+.+.. .. .|-.+......+.+.... ..|.++.+.|
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~-~~d~~i~~ag 80 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPF-IPELWIFNAG 80 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhccc-CCCEEEEcCc
Confidence 4689999999999999998888999999999998877666543321 22 233333322333333222 3566666654
No 268
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.62 E-value=0.025 Score=48.41 Aligned_cols=95 Identities=14% Similarity=0.169 Sum_probs=65.5
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........+ +..++ -.|.+++|+|.+..+|..+++++...|++|++..+...
T Consensus 138 ~PcTp~ai~~ll-~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~----------------------- 193 (286)
T PRK14175 138 VPCTPLGIMEIL-KHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK----------------------- 193 (286)
T ss_pred CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch-----------------------
Confidence 444333333334 33332 35899999999777999999999999999998874321
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+.+.+ +.+|++|.++|.+.+-. -++++++..++++|...
T Consensus 194 ~l~~~~--~~ADIVIsAvg~p~~i~-~~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 194 DMASYL--KDADVIVSAVGKPGLVT-KDVVKEGAVIIDVGNTP 233 (286)
T ss_pred hHHHHH--hhCCEEEECCCCCcccC-HHHcCCCcEEEEcCCCc
Confidence 122222 25899999999875422 25688998999998754
No 269
>PRK06125 short chain dehydrogenase; Provisional
Probab=96.61 E-value=0.027 Score=47.83 Aligned_cols=78 Identities=23% Similarity=0.443 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----Hc-CCC-EEE--eCCCchHHHHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DL-GAD-VCI--NYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~-g~~-~~~--~~~~~~~~~~~~~~~~~~~~d 210 (325)
.+.+++|+|+++.+|..+++.+...|++|++++++.++.+... +. +.. ..+ |-.+......+.+..+ .+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g--~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAG--DID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhC--CCC
Confidence 3689999999999999999999999999999999877655432 11 222 222 3233222333333333 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.|.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99998873
No 270
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=96.61 E-value=0.013 Score=49.29 Aligned_cols=40 Identities=28% Similarity=0.323 Sum_probs=34.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
.+.+++|+|++|.+|..++..+...|++|++++++.++..
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~ 44 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAA 44 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHH
Confidence 3678999999999999999999889999999999866543
No 271
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=96.61 E-value=0.017 Score=49.25 Aligned_cols=81 Identities=21% Similarity=0.372 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-----cCCC---EEEeCCCchH-HHHHHHHhCCCc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-----LGAD---VCINYKTEDF-VARVKEETGGKG 208 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-----~g~~---~~~~~~~~~~-~~~~~~~~~~~~ 208 (325)
+-|++.+|+|++.++|-+-+.=+.+.|.+|+.+.|+.++++.+++ .+.. .++|....+. .+.+.+.+.+-.
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~~~~ye~i~~~l~~~~ 126 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKGDEVYEKLLEKLAGLD 126 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCCchhHHHHHHHhcCCc
Confidence 346899999999999977666666689999999999999987652 2321 2456665553 566777777777
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+-+.++|+|.
T Consensus 127 VgILVNNvG~ 136 (312)
T KOG1014|consen 127 VGILVNNVGM 136 (312)
T ss_pred eEEEEecccc
Confidence 8889999985
No 272
>PRK07035 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.017 Score=48.84 Aligned_cols=76 Identities=22% Similarity=0.383 Sum_probs=51.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~ 208 (325)
+.+++|+|+++.+|..+++.+...|++|+++.++.++.+.+. +.+.. ..+ |..+.... +.+.+..+ .
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 85 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHG--R 85 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--C
Confidence 578999999999999999999999999999998877654433 22322 222 22222211 22222333 5
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|+++.+.|
T Consensus 86 id~li~~ag 94 (252)
T PRK07035 86 LDILVNNAA 94 (252)
T ss_pred CCEEEECCC
Confidence 899998887
No 273
>PRK06482 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.017 Score=49.57 Aligned_cols=78 Identities=23% Similarity=0.275 Sum_probs=51.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EE--EeCCCchHH-HHHHHHh-CCCcccEEEe
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VC--INYKTEDFV-ARVKEET-GGKGVDVILD 214 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~--~~~~~~~~~-~~~~~~~-~~~~~d~vi~ 214 (325)
.++||+|++|.+|..+++.+...|++|+++.++.++.+.+++ .+.. .. .|..+.... ..+.+.. ...++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 479999999999999999998899999999999887766553 2222 12 232322211 2222211 1136899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
+.|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9863
No 274
>PRK07024 short chain dehydrogenase; Provisional
Probab=96.60 E-value=0.02 Score=48.56 Aligned_cols=78 Identities=21% Similarity=0.210 Sum_probs=50.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCC--C-EEE--eCCCchHHHHH-HHHhC-CCcccE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VCI--NYKTEDFVARV-KEETG-GKGVDV 211 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~~--~~~~~~~~~~~-~~~~~-~~~~d~ 211 (325)
+.+++|+|++|.+|..++..+...|++|++++++.++.+...+ +.. . ..+ |..+....... .+... ...+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 4689999999999999999999999999999998877655432 221 1 122 33332222222 11111 125799
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
++.+.|
T Consensus 82 lv~~ag 87 (257)
T PRK07024 82 VIANAG 87 (257)
T ss_pred EEECCC
Confidence 999886
No 275
>PRK07326 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.025 Score=47.18 Aligned_cols=80 Identities=25% Similarity=0.374 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcC---CCEEE--eCCCch-HHHHHHHHhC-CCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLG---ADVCI--NYKTED-FVARVKEETG-GKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g---~~~~~--~~~~~~-~~~~~~~~~~-~~~~d 210 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++...+. ++. .-+.+ |..+.. ....+.+... ..++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999999999999999999888999999999887665443 332 11222 322222 2222222211 12689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
++|.+.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998763
No 276
>PRK07454 short chain dehydrogenase; Provisional
Probab=96.58 E-value=0.024 Score=47.51 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=52.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchH----HHHHHHHhCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDF----VARVKEETGG 206 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~----~~~~~~~~~~ 206 (325)
..+.+++|+|++|.+|..++..+...|++|++++++.++.+.+. +.+.. ..+ |-.+... .+.+.+..+
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG- 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC-
Confidence 34578999999999999999999999999999999887655443 22322 122 2222221 122222223
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
.+|+++.+.|.
T Consensus 83 -~id~lv~~ag~ 93 (241)
T PRK07454 83 -CPDVLINNAGM 93 (241)
T ss_pred -CCCEEEECCCc
Confidence 58999999873
No 277
>PRK08643 acetoin reductase; Validated
Probab=96.56 E-value=0.018 Score=48.82 Aligned_cols=77 Identities=22% Similarity=0.328 Sum_probs=51.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH----HHHHHHHhCCCc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF----VARVKEETGGKG 208 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~----~~~~~~~~~~~~ 208 (325)
+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+. ..+... .+ |-.+... ...+.+..+ +
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~ 79 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFG--D 79 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC--C
Confidence 568999999999999999999999999999998877654432 223221 22 2222221 122222233 6
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|++|.|.|.
T Consensus 80 id~vi~~ag~ 89 (256)
T PRK08643 80 LNVVVNNAGV 89 (256)
T ss_pred CCEEEECCCC
Confidence 8999999863
No 278
>PRK08264 short chain dehydrogenase; Validated
Probab=96.56 E-value=0.022 Score=47.62 Aligned_cols=75 Identities=25% Similarity=0.416 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHcCCC-EEE--eCCCchHHHHHHHHhCCCcccEEEe
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
.+.+++|+|++|.+|..+++.+...|+ +|+++.++.++.+. .+.. ..+ |..+......+.+.. ..+|++|.
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~vi~ 79 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA--SDVTILVN 79 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc--CCCCEEEE
Confidence 467899999999999999999999999 99999988766543 2222 222 333323233333333 25899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
+.|.
T Consensus 80 ~ag~ 83 (238)
T PRK08264 80 NAGI 83 (238)
T ss_pred CCCc
Confidence 8876
No 279
>PRK08226 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.018 Score=49.02 Aligned_cols=77 Identities=22% Similarity=0.357 Sum_probs=50.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH---cCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD---LGAD-VCI--NYKTEDFVA----RVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~---~g~~-~~~--~~~~~~~~~----~~~~~~~~~~ 208 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.++.+..+..++ .+.. ..+ |..+..... .+.+.. ..
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~--~~ 82 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKE--GR 82 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHc--CC
Confidence 46889999999999999999999999999999988754333322 2322 122 222222222 222222 25
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|++|.+.|
T Consensus 83 id~vi~~ag 91 (263)
T PRK08226 83 IDILVNNAG 91 (263)
T ss_pred CCEEEECCC
Confidence 899999887
No 280
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=96.56 E-value=0.018 Score=48.69 Aligned_cols=78 Identities=18% Similarity=0.336 Sum_probs=51.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~ 207 (325)
.+.++||+|+++.+|..+++.+...|++|+++.++.++.+... ..+.. ..+ |-.+..... .+.+.. .
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~--~ 85 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDI--G 85 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhc--C
Confidence 4678999999999999999999999999999998877654332 22322 122 222222222 222222 2
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|+++.+.|.
T Consensus 86 ~id~vi~~ag~ 96 (254)
T PRK08085 86 PIDVLINNAGI 96 (254)
T ss_pred CCCEEEECCCc
Confidence 68999999873
No 281
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.56 E-value=0.015 Score=50.78 Aligned_cols=104 Identities=22% Similarity=0.287 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc----CCCEE----EeCCCchHHHHHHHH--hCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL----GADVC----INYKTEDFVARVKEE--TGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~----g~~~~----~~~~~~~~~~~~~~~--~~~~ 207 (325)
.+.+++|+|+++++|..++..+...|++|+..+|+.++.+.+. ++ ....+ +|-..........+. ....
T Consensus 34 ~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~~ 113 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKEG 113 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcCC
Confidence 4678999999999999999999999999999999987665543 22 22222 233332222222221 1234
Q ss_pred cccEEEeCCChH-----------------------H-HHHhhccccCC--CEEEEEeccCC
Q 020487 208 GVDVILDCMGAS-----------------------Y-FQRNLGSLNID--GRLFIIGTQGG 242 (325)
Q Consensus 208 ~~d~vi~~~g~~-----------------------~-~~~~~~~l~~~--g~~v~~g~~~~ 242 (325)
+.|+.|+++|.- . ...++..|+.. +|+|.+.+..+
T Consensus 114 ~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~ 174 (314)
T KOG1208|consen 114 PLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILG 174 (314)
T ss_pred CccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccc
Confidence 789999988741 0 23444555443 89998876443
No 282
>PRK06197 short chain dehydrogenase; Provisional
Probab=96.56 E-value=0.016 Score=50.59 Aligned_cols=41 Identities=20% Similarity=0.297 Sum_probs=36.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~ 55 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKA 55 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHH
Confidence 46899999999999999999998899999999998776543
No 283
>PRK05717 oxidoreductase; Validated
Probab=96.55 E-value=0.02 Score=48.53 Aligned_cols=78 Identities=26% Similarity=0.280 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
.|.+++|+|++|.+|..++..+...|++|+++.++..+.+.. ++++.. ..+ |-.+.... +.+.+..+ .+|
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g--~id 86 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFG--RLD 86 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhC--CCC
Confidence 367899999999999999999999999999998776654433 344432 222 22232221 22222222 589
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
++|.+.|.
T Consensus 87 ~li~~ag~ 94 (255)
T PRK05717 87 ALVCNAAI 94 (255)
T ss_pred EEEECCCc
Confidence 99998873
No 284
>PRK09186 flagellin modification protein A; Provisional
Probab=96.54 E-value=0.022 Score=48.17 Aligned_cols=42 Identities=21% Similarity=0.233 Sum_probs=36.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (325)
.+.+++|+|++|.+|..++..+...|++|+++.++.++.+.+
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~ 44 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNEL 44 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHH
Confidence 468899999999999999999999999999999887766543
No 285
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=96.53 E-value=0.018 Score=48.92 Aligned_cols=77 Identities=19% Similarity=0.347 Sum_probs=50.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
.+.++||+|+++.+|..+++.+...|++|+++.++ ++.+.+ .+.+.. ..+ |-.+... .+.+.+..+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g-- 90 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFG-- 90 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 47899999999999999999999999999999887 332222 233432 222 3222222 222222232
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|+++.+.|.
T Consensus 91 ~id~li~~ag~ 101 (258)
T PRK06935 91 KIDILVNNAGT 101 (258)
T ss_pred CCCEEEECCCC
Confidence 58999998873
No 286
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=96.52 E-value=0.021 Score=48.41 Aligned_cols=78 Identities=19% Similarity=0.276 Sum_probs=49.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh--HHHHHHcCCC-EEE--eCCCchH----HHHHHHHhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK--LAVCKDLGAD-VCI--NYKTEDF----VARVKEETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~--~~~~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~ 209 (325)
.+.+++|+|+++.+|.++++.+...|++|+.+.+.... .+.+++.+.. ..+ |-.+... .+.+.+..+ .+
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~~ 86 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFG--HI 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--CC
Confidence 36799999999999999999999999999987654322 2333344432 122 2222221 222222333 68
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++++|.|.
T Consensus 87 D~li~~Ag~ 95 (253)
T PRK08993 87 DILVNNAGL 95 (253)
T ss_pred CEEEECCCC
Confidence 999999873
No 287
>PRK09242 tropinone reductase; Provisional
Probab=96.52 E-value=0.021 Score=48.47 Aligned_cols=78 Identities=21% Similarity=0.352 Sum_probs=52.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---c--CCCE-EE--eCCCchHH----HHHHHHhC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---L--GADV-CI--NYKTEDFV----ARVKEETG 205 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~--g~~~-~~--~~~~~~~~----~~~~~~~~ 205 (325)
.+.+++|+|+++.+|..+++.+...|++|++++++.++.+... + . +.+. .+ |..+.... +.+.+..+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4789999999999999999999999999999999887665443 2 1 2221 12 32222222 22223333
Q ss_pred CCcccEEEeCCCh
Q 020487 206 GKGVDVILDCMGA 218 (325)
Q Consensus 206 ~~~~d~vi~~~g~ 218 (325)
++|+++.+.|.
T Consensus 88 --~id~li~~ag~ 98 (257)
T PRK09242 88 --GLHILVNNAGG 98 (257)
T ss_pred --CCCEEEECCCC
Confidence 68999999974
No 288
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.52 E-value=0.01 Score=50.44 Aligned_cols=78 Identities=22% Similarity=0.415 Sum_probs=54.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH----HHHHcCCC--EEEeCCCch----HHHHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA----VCKDLGAD--VCINYKTED----FVARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~----~~~~~g~~--~~~~~~~~~----~~~~~~~~~~~~~ 208 (325)
.|+.|||+|+++++|.+.++=..+.|+++++.+.+.+... ++++.|-. +..|-.... ..+.+++..| .
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G--~ 114 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVG--D 114 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence 5899999999999999988888888999988887776443 33344421 333433322 3455555555 6
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|++++++|.
T Consensus 115 V~ILVNNAGI 124 (300)
T KOG1201|consen 115 VDILVNNAGI 124 (300)
T ss_pred ceEEEecccc
Confidence 9999999885
No 289
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.51 E-value=0.027 Score=48.35 Aligned_cols=78 Identities=18% Similarity=0.263 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecChh---hHHHH-HHcCCCEEE--eCCCchHH----HHHHHHhC
Q 020487 138 SPGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSEE---KLAVC-KDLGADVCI--NYKTEDFV----ARVKEETG 205 (325)
Q Consensus 138 ~~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~~---~~~~~-~~~g~~~~~--~~~~~~~~----~~~~~~~~ 205 (325)
-.+.+++|+|++ +++|.++++.+...|++|+++.+++. +.+.+ ++++....+ |-.+.... +.+.+..+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 87 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG 87 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence 357899999996 79999999999999999998877642 22222 234532223 32222222 22222232
Q ss_pred CCcccEEEeCCC
Q 020487 206 GKGVDVILDCMG 217 (325)
Q Consensus 206 ~~~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 88 --~iD~lv~nAG 97 (272)
T PRK08159 88 --KLDFVVHAIG 97 (272)
T ss_pred --CCcEEEECCc
Confidence 6899999986
No 290
>PRK08263 short chain dehydrogenase; Provisional
Probab=96.50 E-value=0.022 Score=48.95 Aligned_cols=77 Identities=22% Similarity=0.335 Sum_probs=51.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCC-EEE--eCCCchHH----HHHHHHhCCCcccE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGAD-VCI--NYKTEDFV----ARVKEETGGKGVDV 211 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d~ 211 (325)
+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.+ ++.. ..+ |..+.... ..+.+..+ ++|.
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~d~ 80 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFG--RLDI 80 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence 4689999999999999999998889999999998887665543 2221 222 22222111 12222222 6899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++.|.|.
T Consensus 81 vi~~ag~ 87 (275)
T PRK08263 81 VVNNAGY 87 (275)
T ss_pred EEECCCC
Confidence 9999874
No 291
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=96.50 E-value=0.021 Score=49.10 Aligned_cols=77 Identities=17% Similarity=0.349 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|.+++..+...|++|+++.++.++.+.+. ..+.. ..+ |..+..... .+.+..+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g-- 86 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFG-- 86 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC--
Confidence 4688999999999999999999999999999998876554332 22322 122 222222222 2222222
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
++|++|.+.|
T Consensus 87 ~id~li~~ag 96 (278)
T PRK08277 87 PCDILINGAG 96 (278)
T ss_pred CCCEEEECCC
Confidence 6899999987
No 292
>PRK07856 short chain dehydrogenase; Provisional
Probab=96.49 E-value=0.017 Score=48.80 Aligned_cols=73 Identities=26% Similarity=0.360 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEE--eCCCchHH----HHHHHHhCCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFV----ARVKEETGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d~ 211 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++ ...+.. ..+ |..+.... +.+.+..+ .+|+
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~ 78 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHG--RLDV 78 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCCE
Confidence 47899999999999999999999999999999987654 112211 122 32222212 22222223 6899
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
+|.+.|
T Consensus 79 vi~~ag 84 (252)
T PRK07856 79 LVNNAG 84 (252)
T ss_pred EEECCC
Confidence 999887
No 293
>PRK06483 dihydromonapterin reductase; Provisional
Probab=96.49 E-value=0.03 Score=46.76 Aligned_cols=77 Identities=19% Similarity=0.241 Sum_probs=50.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEE-EeCCCchH----HHHHHHHhCCCcccEEE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVC-INYKTEDF----VARVKEETGGKGVDVIL 213 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~-~~~~~~~~----~~~~~~~~~~~~~d~vi 213 (325)
+.+++|+|+++.+|..+++.+...|++|+++.++.++. +.++..+...+ .|-.+... .+.+.+..+ ++|+++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~lv 79 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTD--GLRAII 79 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCC--CccEEE
Confidence 46899999999999999999999999999999876543 33344453221 22222221 222222222 589999
Q ss_pred eCCCh
Q 020487 214 DCMGA 218 (325)
Q Consensus 214 ~~~g~ 218 (325)
.+.|.
T Consensus 80 ~~ag~ 84 (236)
T PRK06483 80 HNASD 84 (236)
T ss_pred ECCcc
Confidence 98873
No 294
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.012 Score=50.44 Aligned_cols=75 Identities=28% Similarity=0.392 Sum_probs=50.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHH----HHHHhCCCcccEEEe
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVAR----VKEETGGKGVDVILD 214 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~----~~~~~~~~~~d~vi~ 214 (325)
+.+++|+|++|.+|..+++.+...|++|++++++.++.... .+... ..|..+...... +.+..+ .+|++|.
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~~~~~~~g--~~d~li~ 79 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI--PGVELLELDVTDDASVQAAVDEVIARAG--RIDVLVN 79 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc--CCCeeEEeecCCHHHHHHHHHHHHHhCC--CCCEEEE
Confidence 56899999999999999999999999999999886554322 12221 223333222222 222222 5899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
|.|.
T Consensus 80 ~ag~ 83 (270)
T PRK06179 80 NAGV 83 (270)
T ss_pred CCCC
Confidence 9984
No 295
>PRK08278 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.016 Score=49.78 Aligned_cols=37 Identities=24% Similarity=0.482 Sum_probs=33.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
.+.+++|+|+++.+|..+++.+...|++|+++.++.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~ 41 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAE 41 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccc
Confidence 4678999999999999999999999999999998654
No 296
>PRK07985 oxidoreductase; Provisional
Probab=96.48 E-value=0.065 Score=46.59 Aligned_cols=35 Identities=31% Similarity=0.339 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
.+.+++|+|+++.+|.++++.+...|++|+++.++
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~ 82 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLP 82 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCC
Confidence 46789999999999999999999999999987654
No 297
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.48 E-value=0.025 Score=47.33 Aligned_cols=79 Identities=23% Similarity=0.323 Sum_probs=50.8
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchH-HHHHHHHh-CCCccc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDF-VARVKEET-GGKGVD 210 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~-~~~~~~~~-~~~~~d 210 (325)
+.+++|+|++|.+|..++..+...|++|++++++.++.+... ..+... .+ |...... ...+.+.. ...++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 578999999999999999999899999999999877654432 223221 22 2222221 11222111 112689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
++|.+.|.
T Consensus 87 ~vi~~ag~ 94 (239)
T PRK07666 87 ILINNAGI 94 (239)
T ss_pred EEEEcCcc
Confidence 99998864
No 298
>PRK05875 short chain dehydrogenase; Provisional
Probab=96.48 E-value=0.018 Score=49.44 Aligned_cols=41 Identities=32% Similarity=0.474 Sum_probs=36.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
++.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~ 46 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAA 46 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHH
Confidence 36899999999999999999999999999999988766543
No 299
>PRK12743 oxidoreductase; Provisional
Probab=96.47 E-value=0.022 Score=48.32 Aligned_cols=77 Identities=22% Similarity=0.268 Sum_probs=49.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHH----HHHcCCC-EEE--eCCCchH----HHHHHHHhCCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV----CKDLGAD-VCI--NYKTEDF----VARVKEETGGK 207 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~----~~~~g~~-~~~--~~~~~~~----~~~~~~~~~~~ 207 (325)
+.+++|+|+++.+|..+++.+...|++|+++.+. .++.+. ++..+.. ..+ |..+... .+.+.+..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 79 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLG-- 79 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 4689999999999999999999999999888643 333322 2334433 222 3333221 223333333
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|++|.+.|.
T Consensus 80 ~id~li~~ag~ 90 (256)
T PRK12743 80 RIDVLVNNAGA 90 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998873
No 300
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=96.47 E-value=0.023 Score=48.52 Aligned_cols=78 Identities=23% Similarity=0.358 Sum_probs=52.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..++..+...|++|+++.++.++.+... ..+... .+ |-.+.... ..+.+..+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 86 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVG-- 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC--
Confidence 4678999999999999999988889999999998877654332 334332 22 33332222 22222233
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|.++.+.|.
T Consensus 87 ~id~li~~ag~ 97 (265)
T PRK07097 87 VIDILVNNAGI 97 (265)
T ss_pred CCCEEEECCCC
Confidence 68999999874
No 301
>PRK05650 short chain dehydrogenase; Provisional
Probab=96.47 E-value=0.022 Score=48.77 Aligned_cols=77 Identities=19% Similarity=0.259 Sum_probs=49.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHHHHHh--CCCcccEE
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGVDVI 212 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~d~v 212 (325)
+++|+|++|.+|..++..+...|++|++++++.++.+.+. ..+.+. .+ |..+......+.+.. ...++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999999999999999999998887655332 223322 22 222222112222111 11368999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
|.+.|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999874
No 302
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.45 E-value=0.091 Score=38.47 Aligned_cols=91 Identities=21% Similarity=0.189 Sum_probs=64.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH--
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY-- 220 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~-- 220 (325)
++|.|. |.+|..+++.++..+.+|++++.++++.+.+++.|.. ++..+..+. ...+..+-..++.++-+.+.+.
T Consensus 1 vvI~G~-g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~--~~l~~a~i~~a~~vv~~~~~d~~n 76 (116)
T PF02254_consen 1 VVIIGY-GRIGREIAEQLKEGGIDVVVIDRDPERVEELREEGVE-VIYGDATDP--EVLERAGIEKADAVVILTDDDEEN 76 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSH--HHHHHTTGGCESEEEEESSSHHHH
T ss_pred eEEEcC-CHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHhcccc-cccccchhh--hHHhhcCccccCEEEEccCCHHHH
Confidence 578898 9999999999999777999999999999999988854 444444332 2233334457888888887654
Q ss_pred --HHHhhccccCCCEEEEE
Q 020487 221 --FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 221 --~~~~~~~l~~~g~~v~~ 237 (325)
+....+.+.+..+++..
T Consensus 77 ~~~~~~~r~~~~~~~ii~~ 95 (116)
T PF02254_consen 77 LLIALLARELNPDIRIIAR 95 (116)
T ss_dssp HHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHCCCCeEEEE
Confidence 23334556677777765
No 303
>PRK07791 short chain dehydrogenase; Provisional
Probab=96.44 E-value=0.029 Score=48.58 Aligned_cols=37 Identities=27% Similarity=0.335 Sum_probs=32.7
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
-.+.+++|+|+++++|.++++.+...|++|+++.++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~ 40 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGV 40 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCc
Confidence 3578999999999999999999999999999987654
No 304
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=96.44 E-value=0.027 Score=47.62 Aligned_cols=77 Identities=26% Similarity=0.417 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~ 207 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.++.+... ..+.. ..+ |..+..... .+.+..+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 80 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFG-- 80 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC--
Confidence 3578999999999999999999889999999999887665432 22322 122 333322222 2222222
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
++|++|.+++
T Consensus 81 ~~d~vi~~a~ 90 (258)
T PRK12429 81 GVDILVNNAG 90 (258)
T ss_pred CCCEEEECCC
Confidence 6899999886
No 305
>PRK08251 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.034 Score=46.79 Aligned_cols=76 Identities=22% Similarity=0.331 Sum_probs=50.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----c--CCC-EEE--eCCCchHHH----HHHHHhCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----L--GAD-VCI--NYKTEDFVA----RVKEETGG 206 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~--g~~-~~~--~~~~~~~~~----~~~~~~~~ 206 (325)
+.+++|+|++|.+|..+++.+...|++|++++++.++.+.+.. . +.. ..+ |..+..... .+.+..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-- 79 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDEL-- 79 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHc--
Confidence 4679999999999999999998899999999998877654432 1 221 122 333322222 222222
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.++|+++.+.|
T Consensus 80 ~~id~vi~~ag 90 (248)
T PRK08251 80 GGLDRVIVNAG 90 (248)
T ss_pred CCCCEEEECCC
Confidence 26899999986
No 306
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=96.43 E-value=0.028 Score=50.18 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=66.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHHcC---CC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.+|||+|+ |.+|..+++.+...| .+|++++|+.++.+.+.... .. ..+|-.+ .+.+.+... ++|+||+|
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d---~~al~~li~--~~d~VIn~ 75 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAAD---VDALVALIK--DFDLVINA 75 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccC---hHHHHHHHh--cCCEEEEe
Confidence 46999999 999999999988777 79999999999888876543 21 2333333 234444444 46999999
Q ss_pred CChHHHHHhh-ccccCCCEEEEEeccC
Q 020487 216 MGASYFQRNL-GSLNIDGRLFIIGTQG 241 (325)
Q Consensus 216 ~g~~~~~~~~-~~l~~~g~~v~~g~~~ 241 (325)
.+...-..++ .|++.+=.+++...+.
T Consensus 76 ~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 76 APPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred CCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 9987644454 4556666667664433
No 307
>PRK08703 short chain dehydrogenase; Provisional
Probab=96.43 E-value=0.018 Score=48.21 Aligned_cols=42 Identities=26% Similarity=0.417 Sum_probs=36.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC 180 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~ 180 (325)
++.+++|+|++|.+|..+++.+...|++|+++++++++.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~ 46 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV 46 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH
Confidence 367899999999999999999999999999999998766543
No 308
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=96.41 E-value=0.026 Score=47.83 Aligned_cols=77 Identities=19% Similarity=0.323 Sum_probs=51.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHH----HHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVAR----VKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~----~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..++..+...|++|++++++.++.+.+. ..+.+ ..+ |-.+...... +.+..+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~-- 87 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLG-- 87 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC--
Confidence 3789999999999999999999999999999998877654432 23332 222 3222222222 222222
Q ss_pred cccEEEeCCC
Q 020487 208 GVDVILDCMG 217 (325)
Q Consensus 208 ~~d~vi~~~g 217 (325)
.+|+++.+.|
T Consensus 88 ~~d~li~~ag 97 (255)
T PRK06113 88 KVDILVNNAG 97 (255)
T ss_pred CCCEEEECCC
Confidence 5899999887
No 309
>PLN02253 xanthoxin dehydrogenase
Probab=96.39 E-value=0.024 Score=48.80 Aligned_cols=78 Identities=23% Similarity=0.366 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCC--C-EE--EeCCCchHH----HHHHHHhCCCc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGA--D-VC--INYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~--~-~~--~~~~~~~~~----~~~~~~~~~~~ 208 (325)
.+.+++|+|++|.+|.++++.+...|++|++++++.+..+... +++. . .. .|-.+.... +.+.+..+ +
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g--~ 94 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFG--T 94 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhC--C
Confidence 3678999999999999999999889999999998766544332 3321 1 12 233332222 22223333 5
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++++.|.
T Consensus 95 id~li~~Ag~ 104 (280)
T PLN02253 95 LDIMVNNAGL 104 (280)
T ss_pred CCEEEECCCc
Confidence 8999998863
No 310
>PRK07074 short chain dehydrogenase; Provisional
Probab=96.39 E-value=0.029 Score=47.53 Aligned_cols=79 Identities=25% Similarity=0.296 Sum_probs=50.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC--EEE--eCCCchHH-HHHHHHh-CCCcccEE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD--VCI--NYKTEDFV-ARVKEET-GGKGVDVI 212 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~--~~~--~~~~~~~~-~~~~~~~-~~~~~d~v 212 (325)
+.+++|+|++|.+|..++..+...|++|++++++.++.+.+. .+... ..+ |-.+.... ..+.+.. ...++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999999999889999999998877665443 22211 222 22222211 1121111 11258999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999873
No 311
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=96.37 E-value=0.031 Score=47.33 Aligned_cols=77 Identities=13% Similarity=0.189 Sum_probs=51.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc--CCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL--GADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~--g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.+.+++|+|++|.+|..++..+...|++|+++.++.++....... +...+ .|..+. ...+.+..+ .++|++|.+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~--~~~l~~~~~-~~~d~vi~~ 92 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG--SDKLVEAIG-DDSDAVICA 92 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC--HHHHHHHhh-cCCCEEEEC
Confidence 357899999999999999998888899999999887765433211 12211 132221 123334332 268999988
Q ss_pred CCh
Q 020487 216 MGA 218 (325)
Q Consensus 216 ~g~ 218 (325)
.|.
T Consensus 93 ~g~ 95 (251)
T PLN00141 93 TGF 95 (251)
T ss_pred CCC
Confidence 764
No 312
>COG4122 Predicted O-methyltransferase [General function prediction only]
Probab=96.37 E-value=0.056 Score=44.36 Aligned_cols=101 Identities=21% Similarity=0.227 Sum_probs=71.1
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCCEEEeCCC-chHHHHHHHHhCC
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADVCINYKT-EDFVARVKEETGG 206 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~-~~~~~~~~~~~~~ 206 (325)
.++.....++|=+| +.+|++++.+|..+. .+++.+..++++.+.++ +.|.+..+.... .+..+.+.+ ...
T Consensus 54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~gdal~~l~~-~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGGDALDVLSR-LLD 130 (219)
T ss_pred HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecCcHHHHHHh-ccC
Confidence 34456788899998 578999999999885 58999999999877665 466654322222 344445544 334
Q ss_pred CcccEEEeCCCh----HHHHHhhccccCCCEEEEE
Q 020487 207 KGVDVILDCMGA----SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 207 ~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~~ 237 (325)
..||+||-=... ..+...++.|++||-++.=
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~D 165 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVAD 165 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEe
Confidence 589999754443 3478889999999998854
No 313
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=96.37 E-value=0.029 Score=47.25 Aligned_cols=79 Identities=23% Similarity=0.267 Sum_probs=51.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEEeC--CCchHHHH-HHHHhC-CCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCINY--KTEDFVAR-VKEETG-GKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~~~--~~~~~~~~-~~~~~~-~~~~ 209 (325)
++.++||+|++|.+|..+++.+...|++|++++++.++...+. ..+.. .++.. .+...... +.+... ..++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999999999999999998877655432 22322 22222 22222222 222111 1268
Q ss_pred cEEEeCCC
Q 020487 210 DVILDCMG 217 (325)
Q Consensus 210 d~vi~~~g 217 (325)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999987
No 314
>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit. This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.
Probab=96.36 E-value=0.075 Score=39.21 Aligned_cols=99 Identities=16% Similarity=0.258 Sum_probs=65.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH----HcCCC--EEEeCCCchHHHHHHHHhC
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK----DLGAD--VCINYKTEDFVARVKEETG 205 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~----~~g~~--~~~~~~~~~~~~~~~~~~~ 205 (325)
....+.++++++-+|+ |. |..+..+++..+ .+|+.++.++...+.++ ..+.. .++..+.... ....
T Consensus 13 ~~~~~~~~~~vldlG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~---~~~~-- 85 (124)
T TIGR02469 13 SKLRLRPGDVLWDIGA-GS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEA---LEDS-- 85 (124)
T ss_pred HHcCCCCCCEEEEeCC-CC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEecccccc---Chhh--
Confidence 4446677889999997 44 888999998874 69999999988776654 23332 2222221110 1111
Q ss_pred CCcccEEEeCCChH----HHHHhhccccCCCEEEEEe
Q 020487 206 GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 206 ~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~~g 238 (325)
...+|.|+...+.. .+..+.+.|+++|+++...
T Consensus 86 ~~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~~ 122 (124)
T TIGR02469 86 LPEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLNA 122 (124)
T ss_pred cCCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence 13699999765432 3677889999999998753
No 315
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=96.36 E-value=0.046 Score=47.03 Aligned_cols=78 Identities=17% Similarity=0.157 Sum_probs=57.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
-.|.+++|+|+++.+|..++.++...|++|++.-+..+ .+.+.+ +.+|++++++|
T Consensus 157 l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~-----------------------~L~~~~--~~aDIvI~AtG 211 (283)
T PRK14192 157 LAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQ-----------------------NLPELV--KQADIIVGAVG 211 (283)
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCch-----------------------hHHHHh--ccCCEEEEccC
Confidence 35889999999667999999999999998887764211 112222 36899999998
Q ss_pred hHHHHHhhccccCCCEEEEEeccC
Q 020487 218 ASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+.+ --.+.++++..++++|...
T Consensus 212 ~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 212 KPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred CCCc-CCHHHcCCCCEEEEEEEee
Confidence 6552 2236689999999998654
No 316
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=96.35 E-value=0.041 Score=47.20 Aligned_cols=90 Identities=13% Similarity=0.097 Sum_probs=59.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc---CCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL---GADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
..+.+++|+|+ |.+|.+++..+...|++|++..++.++.+.+. .+ +........ . . ....+|++|
T Consensus 115 ~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~------~---~-~~~~~DivI 183 (270)
T TIGR00507 115 RPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD------E---L-PLHRVDLII 183 (270)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh------h---h-cccCccEEE
Confidence 45788999998 89999999988888999999999887765443 32 211121110 1 1 112589999
Q ss_pred eCCChHHHH------HhhccccCCCEEEEEe
Q 020487 214 DCMGASYFQ------RNLGSLNIDGRLFIIG 238 (325)
Q Consensus 214 ~~~g~~~~~------~~~~~l~~~g~~v~~g 238 (325)
+|++..... ...+.++++..++++.
T Consensus 184 natp~gm~~~~~~~~~~~~~l~~~~~v~D~~ 214 (270)
T TIGR00507 184 NATSAGMSGNIDEPPVPAEKLKEGMVVYDMV 214 (270)
T ss_pred ECCCCCCCCCCCCCCCCHHHcCCCCEEEEec
Confidence 998863211 1134567777777773
No 317
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]
Probab=96.32 E-value=0.029 Score=48.14 Aligned_cols=149 Identities=17% Similarity=0.197 Sum_probs=86.2
Q ss_pred CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHH--HHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWS--TVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~--~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
-+++|++.+..++ |.+|..-....++++..++.+- -.+...|++. +|.+ .+++|.++|=.|+ +.|.+
T Consensus 108 P~rig~~f~I~Ps---w~~~~~~~~~~~i~lDPGlAFG----TG~HpTT~lcL~~Le~--~~~~g~~vlDvGc--GSGIL 176 (300)
T COG2264 108 PVRIGERFVIVPS---WREYPEPSDELNIELDPGLAFG----TGTHPTTSLCLEALEK--LLKKGKTVLDVGC--GSGIL 176 (300)
T ss_pred cEEeeeeEEECCC---CccCCCCCCceEEEEccccccC----CCCChhHHHHHHHHHH--hhcCCCEEEEecC--ChhHH
Confidence 3667888777754 5444222234566666555443 2333344433 3433 3468999999996 34666
Q ss_pred HHHHHHHCCC-EEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH----HHHHhhc
Q 020487 156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS----YFQRNLG 226 (325)
Q Consensus 156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~----~~~~~~~ 226 (325)
++..++ +|+ +|++++..+...+.+++ -+... ....... ...+...++.||+|+.+.=-. ....+..
T Consensus 177 aIAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~-~~~~~~~---~~~~~~~~~~~DvIVANILA~vl~~La~~~~~ 251 (300)
T COG2264 177 AIAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVEL-LVQAKGF---LLLEVPENGPFDVIVANILAEVLVELAPDIKR 251 (300)
T ss_pred HHHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCch-hhhcccc---cchhhcccCcccEEEehhhHHHHHHHHHHHHH
Confidence 665554 477 69999988776665543 22221 0000000 111112234799999886432 2456678
Q ss_pred cccCCCEEEEEeccCC
Q 020487 227 SLNIDGRLFIIGTQGG 242 (325)
Q Consensus 227 ~l~~~g~~v~~g~~~~ 242 (325)
.++|+|++++.|....
T Consensus 252 ~lkpgg~lIlSGIl~~ 267 (300)
T COG2264 252 LLKPGGRLILSGILED 267 (300)
T ss_pred HcCCCceEEEEeehHh
Confidence 8999999999987654
No 318
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=96.29 E-value=0.035 Score=46.51 Aligned_cols=78 Identities=29% Similarity=0.427 Sum_probs=51.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEE--eCCCchHH----HHHHHHhCCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCI--NYKTEDFV----ARVKEETGGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~--~~~~~~~~----~~~~~~~~~~~~d 210 (325)
++.+++|+|++|.+|..++..+...|+.|+...++.++.+... .++.. ..+ |-.+.... ..+.+..+ ++|
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id 82 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLE--GVD 82 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcC--CCC
Confidence 3678999999999999999999889999988887776665443 33332 222 22222211 12222232 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
.+|.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12936 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99999873
No 319
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=96.29 E-value=0.034 Score=43.59 Aligned_cols=77 Identities=25% Similarity=0.322 Sum_probs=47.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCC-EEEEEecC--hhhHHHH----HHcCCCE-EE--eCCCchHHHHHHH-Hh-CCCcc
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGS--EEKLAVC----KDLGADV-CI--NYKTEDFVARVKE-ET-GGKGV 209 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~--~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~~~-~~-~~~~~ 209 (325)
+++|+|+++++|..+++.+...|. +|+++.++ .++.+.+ +..+... ++ |.......+.+.+ .. ....+
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~l 81 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGPL 81 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSSE
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeecccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 689999999999999999988876 77888888 3433332 3344321 22 2222222222222 11 12368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|.|.|.
T Consensus 82 d~li~~ag~ 90 (167)
T PF00106_consen 82 DILINNAGI 90 (167)
T ss_dssp SEEEEECSC
T ss_pred ccccccccc
Confidence 999998874
No 320
>PRK06914 short chain dehydrogenase; Provisional
Probab=96.27 E-value=0.052 Score=46.66 Aligned_cols=79 Identities=18% Similarity=0.174 Sum_probs=51.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCC--C-EEE--eCCCchHHHHHHHHh-CCCcc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGA--D-VCI--NYKTEDFVARVKEET-GGKGV 209 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~--~-~~~--~~~~~~~~~~~~~~~-~~~~~ 209 (325)
+.+++|+|++|.+|..++..+...|++|++++++.+..+...+ .+. . ..+ |..+......+.+.. ...++
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i 82 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI 82 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence 5689999999999999999999999999999988776544432 221 1 222 333322222222221 11268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|.++.|.|.
T Consensus 83 d~vv~~ag~ 91 (280)
T PRK06914 83 DLLVNNAGY 91 (280)
T ss_pred eEEEECCcc
Confidence 999999863
No 321
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=96.25 E-value=0.034 Score=47.16 Aligned_cols=40 Identities=30% Similarity=0.320 Sum_probs=34.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
+.+++|+|++|.+|..++..+...|++|+.++++..+.+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~ 41 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAAN 41 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHH
Confidence 4689999999999999999999999999999988765543
No 322
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=96.22 E-value=0.031 Score=47.28 Aligned_cols=78 Identities=26% Similarity=0.457 Sum_probs=52.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCC-EEE--eCCCchHH----HHHHHHhCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGAD-VCI--NYKTEDFV----ARVKEETGGK 207 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~----~~~~~~~~~~ 207 (325)
.+.+++|+|+++.+|..++..+...|++|+++.++.+..+.+ ++.+.. ..+ |..+.... +.+.+..+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~-- 87 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHG-- 87 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcC--
Confidence 478999999999999999998888999999999987655433 223322 122 33332222 22222222
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
.+|.++.+.|.
T Consensus 88 ~id~vi~~ag~ 98 (256)
T PRK06124 88 RLDILVNNVGA 98 (256)
T ss_pred CCCEEEECCCC
Confidence 68999998874
No 323
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.22 E-value=0.029 Score=50.05 Aligned_cols=77 Identities=13% Similarity=0.075 Sum_probs=50.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-HHc--CCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-KDL--GAD-VCINYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
+.++||+|++|.+|..+++.+...|.+|+++.++....... ..+ +.. ..+..+-.+ ...+.+.....++|+||.+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vih~ 82 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRD-AAKLRKAIAEFKPEIVFHL 82 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCC-HHHHHHHHhhcCCCEEEEC
Confidence 67899999999999999999999999999998766543222 112 111 122222222 2233444433368999999
Q ss_pred CC
Q 020487 216 MG 217 (325)
Q Consensus 216 ~g 217 (325)
++
T Consensus 83 A~ 84 (349)
T TIGR02622 83 AA 84 (349)
T ss_pred Cc
Confidence 87
No 324
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.22 E-value=0.033 Score=47.52 Aligned_cols=79 Identities=18% Similarity=0.224 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEE--eCCCchHHHHHHH-HhC-CCc
Q 020487 139 PGESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCI--NYKTEDFVARVKE-ETG-GKG 208 (325)
Q Consensus 139 ~~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~--~~~~~~~~~~~~~-~~~-~~~ 208 (325)
.+.+++|+|+++ ++|.++++.+...|++|++..+++...+.+++ .+....+ |-.+....+.+.+ ... ...
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 478899999964 89999999999999999988876421222222 2222222 3333222222222 111 125
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|+++++.|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 899999987
No 325
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.22 E-value=0.037 Score=48.39 Aligned_cols=80 Identities=18% Similarity=0.289 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCCE-EE--eCCCchHHHHHHHH-hCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGADV-CI--NYKTEDFVARVKEE-TGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~~-~~--~~~~~~~~~~~~~~-~~~~~~ 209 (325)
.+.+++|+|+++.+|...++.+...|++|++.++... ..+ .++..+... .+ |-.+......+.+. .....+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~i 90 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGGL 90 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCCC
Confidence 4688999999999999999999999999999876432 222 223334332 22 22222222222221 111368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|++.|.
T Consensus 91 D~li~nAG~ 99 (306)
T PRK07792 91 DIVVNNAGI 99 (306)
T ss_pred CEEEECCCC
Confidence 999998873
No 326
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=96.21 E-value=0.051 Score=47.59 Aligned_cols=90 Identities=18% Similarity=0.204 Sum_probs=62.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.+|.|+|+ |.+|.+.+..++..|. +|++.++++++.+.+++.|...... ... .+.. ..+|+|+.|+..
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~~~g~~~~~~---~~~----~~~~--~~aDvViiavp~ 76 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARARELGLGDRVT---TSA----AEAV--KGADLVILCVPV 76 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhCCCCceec---CCH----HHHh--cCCCEEEECCCH
Confidence 57999997 9999999999988884 8999999988888887777532111 111 1112 258999999987
Q ss_pred HHH----HHhhccccCCCEEEEEecc
Q 020487 219 SYF----QRNLGSLNIDGRLFIIGTQ 240 (325)
Q Consensus 219 ~~~----~~~~~~l~~~g~~v~~g~~ 240 (325)
... ..+...++++..++.+|..
T Consensus 77 ~~~~~v~~~l~~~l~~~~iv~dvgs~ 102 (307)
T PRK07502 77 GASGAVAAEIAPHLKPGAIVTDVGSV 102 (307)
T ss_pred HHHHHHHHHHHhhCCCCCEEEeCccc
Confidence 543 3334456777767666543
No 327
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=96.21 E-value=0.041 Score=46.81 Aligned_cols=77 Identities=17% Similarity=0.255 Sum_probs=47.6
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEecCh------hhHHHHHHcCCC-EEE--eCCCchH----HHHHHHH
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTAGSE------EKLAVCKDLGAD-VCI--NYKTEDF----VARVKEE 203 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~~~~------~~~~~~~~~g~~-~~~--~~~~~~~----~~~~~~~ 203 (325)
.+.+++|+|++ +++|.++++.+...|++|+++.++. +..+.+++.+.. ..+ |-.+... .+.+.+.
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46889999985 7999999999999999998875432 222333322211 222 3333222 2223333
Q ss_pred hCCCcccEEEeCCC
Q 020487 204 TGGKGVDVILDCMG 217 (325)
Q Consensus 204 ~~~~~~d~vi~~~g 217 (325)
.+ .+|+++++.|
T Consensus 85 ~g--~iD~lv~nag 96 (258)
T PRK07370 85 WG--KLDILVHCLA 96 (258)
T ss_pred cC--CCCEEEEccc
Confidence 33 6899999987
No 328
>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional
Probab=96.20 E-value=0.035 Score=45.49 Aligned_cols=97 Identities=20% Similarity=0.088 Sum_probs=64.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCC---EEEeCCCchHHHHHHHH
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEE 203 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~ 203 (325)
+...++++++||-.|+ +.|..++.+++..+ .+|+.++.+++..+.++ ..+.. .++..+.... +
T Consensus 66 ~~l~~~~~~~VLDiG~--GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~---~--- 137 (205)
T PRK13944 66 ELIEPRPGMKILEVGT--GSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRG---L--- 137 (205)
T ss_pred HhcCCCCCCEEEEECc--CccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccC---C---
Confidence 5566789999999996 45777777777764 59999999988665554 34432 2232222111 1
Q ss_pred hCCCcccEEEeCCChHH-HHHhhccccCCCEEEEE
Q 020487 204 TGGKGVDVILDCMGASY-FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 204 ~~~~~~d~vi~~~g~~~-~~~~~~~l~~~g~~v~~ 237 (325)
.....||.|+-+..... ...+.+.|++||+++..
T Consensus 138 ~~~~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 138 EKHAPFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred ccCCCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 11247999987766544 36667899999999764
No 329
>PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms []. In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A ....
Probab=96.20 E-value=0.08 Score=39.54 Aligned_cols=51 Identities=12% Similarity=0.218 Sum_probs=37.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCC--CEEEEEecChh--h-HHHHHHcCCCEEEeCCC
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEE--K-LAVCKDLGADVCINYKT 193 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~--~-~~~~~~~g~~~~~~~~~ 193 (325)
|.|+|+||++|..+..+.+++. ++|+..+.... . .++++++...++.-.+.
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~ 56 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADE 56 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSH
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH
Confidence 5799999999999999999996 68888774333 2 24556788777765544
No 330
>PRK06701 short chain dehydrogenase; Provisional
Probab=96.17 E-value=0.04 Score=47.81 Aligned_cols=37 Identities=27% Similarity=0.392 Sum_probs=32.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
.+.++||+|++|.+|..++..+...|++|+++.++..
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~ 81 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEH 81 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4678999999999999999999889999999987653
No 331
>PRK07775 short chain dehydrogenase; Provisional
Probab=96.16 E-value=0.047 Score=46.86 Aligned_cols=79 Identities=23% Similarity=0.233 Sum_probs=50.3
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHHHHHHHHh--CCCccc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFVARVKEET--GGKGVD 210 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~~~~~~~~--~~~~~d 210 (325)
..+++|+|++|.+|..+++.+...|++|++++++.++.+... ..+... .+ |..+......+.+.. .-.++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 458999999999999999999999999999998776554332 234332 22 222222222222211 012689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
.+|.+.|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99998874
No 332
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.16 E-value=0.041 Score=46.34 Aligned_cols=77 Identities=26% Similarity=0.352 Sum_probs=48.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHH----HHHcCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAV----CKDLGADV-CI--NYKTEDFVA----RVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~----~~~~g~~~-~~--~~~~~~~~~----~~~~~~~~ 206 (325)
++.+++|+|++|.+|..++..+...|++|++. .++.++.+. .+..+... .+ |..+..... .+.+..+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 81 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFG- 81 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 46789999999999999999999999998764 556554432 22334322 22 222222111 2222222
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.+|++|.+.|
T Consensus 82 -~id~vi~~ag 91 (250)
T PRK08063 82 -RLDVFVNNAA 91 (250)
T ss_pred -CCCEEEECCC
Confidence 5899999887
No 333
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=96.16 E-value=0.061 Score=41.94 Aligned_cols=86 Identities=17% Similarity=0.019 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|+|.|+ |.+|.--++.+...|++|+++. ++..+.+++++.-.. .... .... .-.++|+|+.++++
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~~l~~i~~-~~~~-~~~~------dl~~a~lViaaT~d 80 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMKELPYITW-KQKT-FSND------DIKDAHLIYAATNQ 80 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHHhccCcEE-Eecc-cChh------cCCCceEEEECCCC
Confidence 4789999998 9999998888888899999885 333344444542221 1111 1011 12368999999998
Q ss_pred HHHHHhhccccCCCEEE
Q 020487 219 SYFQRNLGSLNIDGRLF 235 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v 235 (325)
+..+..+........++
T Consensus 81 ~e~N~~i~~~a~~~~~v 97 (157)
T PRK06719 81 HAVNMMVKQAAHDFQWV 97 (157)
T ss_pred HHHHHHHHHHHHHCCcE
Confidence 87765554443333333
No 334
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=96.15 E-value=0.06 Score=42.29 Aligned_cols=86 Identities=22% Similarity=0.228 Sum_probs=58.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH-H
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS-Y 220 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~ 220 (325)
+|.++|. |.+|...+.-+...|++|++..++.++.+.+.+.|+... + + ..++.+ ..|+|+-|+.+. .
T Consensus 3 ~Ig~IGl-G~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~g~~~~-~----s-~~e~~~-----~~dvvi~~v~~~~~ 70 (163)
T PF03446_consen 3 KIGFIGL-GNMGSAMARNLAKAGYEVTVYDRSPEKAEALAEAGAEVA-D----S-PAEAAE-----QADVVILCVPDDDA 70 (163)
T ss_dssp EEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHHTTEEEE-S----S-HHHHHH-----HBSEEEE-SSSHHH
T ss_pred EEEEEch-HHHHHHHHHHHHhcCCeEEeeccchhhhhhhHHhhhhhh-h----h-hhhHhh-----cccceEeecccchh
Confidence 6889998 999999999999999999999999999988888774322 1 1 122222 469999998863 3
Q ss_pred HHH------hhccccCCCEEEEEec
Q 020487 221 FQR------NLGSLNIDGRLFIIGT 239 (325)
Q Consensus 221 ~~~------~~~~l~~~g~~v~~g~ 239 (325)
... ++..+.++..++.++.
T Consensus 71 v~~v~~~~~i~~~l~~g~iiid~sT 95 (163)
T PF03446_consen 71 VEAVLFGENILAGLRPGKIIIDMST 95 (163)
T ss_dssp HHHHHHCTTHGGGS-TTEEEEE-SS
T ss_pred hhhhhhhhHHhhccccceEEEecCC
Confidence 333 4555667777777754
No 335
>PRK07577 short chain dehydrogenase; Provisional
Probab=96.15 E-value=0.031 Score=46.52 Aligned_cols=74 Identities=22% Similarity=0.233 Sum_probs=49.4
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCch-HHHHHHHHhCCCcccEEEeCCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTED-FVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+.+++|+|++|.+|..+++.+...|++|+++.++.++ ..... ...|..+.. ....+.+.....++|+++.+.|
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-----~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~ag 77 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-----DFPGELFACDLADIEQTAATLAQINEIHPVDAIVNNVG 77 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-----ccCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECCC
Confidence 5789999999999999999999999999999987654 11111 122333322 2222333333336899999887
Q ss_pred h
Q 020487 218 A 218 (325)
Q Consensus 218 ~ 218 (325)
.
T Consensus 78 ~ 78 (234)
T PRK07577 78 I 78 (234)
T ss_pred C
Confidence 3
No 336
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.15 E-value=0.04 Score=49.98 Aligned_cols=80 Identities=23% Similarity=0.363 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH-------HHHHcCCCEEE--eCCCchHHHHHHHHhCCCc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-------VCKDLGADVCI--NYKTEDFVARVKEETGGKG 208 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~-------~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 208 (325)
..+.+|+|+|++|.+|..+++.+...|++|++++++..+.. .........++ |..+......+.+..+ .+
T Consensus 58 ~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~~-~~ 136 (390)
T PLN02657 58 PKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSEG-DP 136 (390)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHhC-CC
Confidence 44678999999999999999999889999999998765421 11112112222 3333322222222111 16
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+||+|.+.
T Consensus 137 ~D~Vi~~aa~ 146 (390)
T PLN02657 137 VDVVVSCLAS 146 (390)
T ss_pred CcEEEECCcc
Confidence 8999998863
No 337
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=96.14 E-value=0.037 Score=46.20 Aligned_cols=71 Identities=18% Similarity=0.234 Sum_probs=53.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChh--hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE--KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
|+|+|++|.+|..+++.+...+.+|.+.+|+.. ....+++.|+..+ ..+-. -.+.+.+.+. ++|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv-~~d~~-~~~~l~~al~--g~d~v~~~~~ 73 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVV-EADYD-DPESLVAALK--GVDAVFSVTP 73 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEE-ES-TT--HHHHHHHHT--TCSEEEEESS
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhhcccceEe-ecccC-CHHHHHHHHc--CCceEEeecC
Confidence 789999999999999999999999999999864 3456677888544 32222 2455666664 7999999888
No 338
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=96.14 E-value=0.044 Score=45.91 Aligned_cols=37 Identities=35% Similarity=0.452 Sum_probs=32.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
.+.+++|+|++|.+|..++..+...|++|+++.++..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~ 40 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSE 40 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCch
Confidence 3568999999999999999999999999988876654
No 339
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.14 E-value=0.066 Score=45.31 Aligned_cols=78 Identities=28% Similarity=0.369 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEE-EeCCCchHHH----HHHHHhCCCcccEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVC-INYKTEDFVA----RVKEETGGKGVDVI 212 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~-~~~~~~~~~~----~~~~~~~~~~~d~v 212 (325)
.+.+++|+|+++.+|..+++.+...|++|+++.+..+ ..+.++..+...+ .|-.+..... .+.+..+ ++|++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~--~id~l 83 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELREKGVFTIKCDVGNRDQVKKSKEVVEKEFG--RVDVL 83 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhCCCeEEEecCCCHHHHHHHHHHHHHHcC--CCCEE
Confidence 3678999999999999999999999999988765433 3334443333221 2333322222 2222222 68999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
|.|.|.
T Consensus 84 i~~ag~ 89 (255)
T PRK06463 84 VNNAGI 89 (255)
T ss_pred EECCCc
Confidence 998864
No 340
>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase. Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.
Probab=96.14 E-value=0.012 Score=48.66 Aligned_cols=97 Identities=21% Similarity=0.101 Sum_probs=63.3
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH----HcCCCE--EEeCCCchHHHHHHHHh
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK----DLGADV--CINYKTEDFVARVKEET 204 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~----~~g~~~--~~~~~~~~~~~~~~~~~ 204 (325)
+...++++++||-+|+ +.|..++.+++..+ .+|+.++.+++..+.++ +.+.+. ++..+.... ..
T Consensus 71 ~~l~~~~~~~VLDiG~--GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~------~~ 142 (215)
T TIGR00080 71 ELLELKPGMKVLEIGT--GSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQG------WE 142 (215)
T ss_pred HHhCCCCcCEEEEECC--CccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccC------Cc
Confidence 5567889999999996 45777777887764 37999998888766554 344432 222221110 01
Q ss_pred CCCcccEEEeCCChH-HHHHhhccccCCCEEEEE
Q 020487 205 GGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~~ 237 (325)
....||+|+-+.... ....+.+.|++||+++..
T Consensus 143 ~~~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 143 PLAPYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred ccCCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 123799988654433 345677899999998865
No 341
>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences. Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....
Probab=96.11 E-value=0.035 Score=47.99 Aligned_cols=146 Identities=21% Similarity=0.257 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEcCCceeeeEEeecCCceeeCCCCCCHHhhccCcchHHHHH--HHHHhhcCCCCCCEEEEEcCCchHHHH
Q 020487 78 RWKVGDQVCALLGGGGYAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVW--STVFMTSHLSPGESFLVHGGSSGIGTF 155 (325)
Q Consensus 78 ~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~--~~l~~~~~~~~~~~vli~g~~g~~G~~ 155 (325)
-+++|++.+..+. |.++-.-+...++.+.+.+.+-.+. ..+|.. .+|.+. ..+|++||=.|+ +.|.+
T Consensus 107 P~~vg~~~~I~P~---w~~~~~~~~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~--GSGIL 175 (295)
T PF06325_consen 107 PIRVGDRLVIVPS---WEEYPEPPDEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGC--GSGIL 175 (295)
T ss_dssp -EEECTTEEEEET---T----SSTTSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES---TTSHH
T ss_pred cEEECCcEEEECC---CcccCCCCCcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCC--cHHHH
Confidence 3667887777754 5555222344566666555543321 222222 223233 578899999986 33555
Q ss_pred HHHHHHHCCC-EEEEEecChhhHHHHHH----cCC-CEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH----HHHhh
Q 020487 156 AIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGA-DVCINYKTEDFVARVKEETGGKGVDVILDCMGASY----FQRNL 225 (325)
Q Consensus 156 ~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~-~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~----~~~~~ 225 (325)
++..++ +|+ +|++++..+...+.+++ -+. +.+......... ...||+|+.+.-... ...+.
T Consensus 176 aiaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~~~~--------~~~~dlvvANI~~~vL~~l~~~~~ 246 (295)
T PF06325_consen 176 AIAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSEDLV--------EGKFDLVVANILADVLLELAPDIA 246 (295)
T ss_dssp HHHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTSCTC--------CS-EEEEEEES-HHHHHHHHHHCH
T ss_pred HHHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEecccc--------cccCCEEEECCCHHHHHHHHHHHH
Confidence 555454 488 79999988776655542 121 222111111111 147999999887654 34556
Q ss_pred ccccCCCEEEEEeccCCc
Q 020487 226 GSLNIDGRLFIIGTQGGA 243 (325)
Q Consensus 226 ~~l~~~g~~v~~g~~~~~ 243 (325)
+.++++|.+++.|....+
T Consensus 247 ~~l~~~G~lIlSGIl~~~ 264 (295)
T PF06325_consen 247 SLLKPGGYLILSGILEEQ 264 (295)
T ss_dssp HHEEEEEEEEEEEEEGGG
T ss_pred HhhCCCCEEEEccccHHH
Confidence 788999999999987654
No 342
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=96.10 E-value=0.022 Score=48.21 Aligned_cols=74 Identities=16% Similarity=0.179 Sum_probs=56.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
+|+|+|++|- |..++..+...|.+|++.++++...+.+...|...+.....+ ...+.+.....++|+|+|++-.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~g~l~--~~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHTGALD--PQELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEECCCC--HHHHHHHHHhcCCCEEEEcCCH
Confidence 6999999776 999998888889999999999987777776665555433222 2346666666789999999865
No 343
>PRK06523 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.0089 Score=50.79 Aligned_cols=72 Identities=33% Similarity=0.475 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEE--eCCCchHHH----HHHHHhCCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCI--NYKTEDFVA----RVKEETGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~~d~ 211 (325)
++.+++|+|++|.+|..+++.+...|++|+++.++.... .+.. ..+ |-.+..... .+.+..+ .+|+
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id~ 80 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLG--GVDI 80 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcC--CCCE
Confidence 478999999999999999999999999999999875432 1111 122 333322222 2223333 6899
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
++++.|
T Consensus 81 vi~~ag 86 (260)
T PRK06523 81 LVHVLG 86 (260)
T ss_pred EEECCc
Confidence 999887
No 344
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.08 E-value=0.073 Score=44.00 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=50.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCC-CcccEEEeCCCh
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGG-KGVDVILDCMGA 218 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~d~vi~~~g~ 218 (325)
.+++|+|++|.+|..++..+... ++|+++.++.++.+.+.+ .....++..+-.+ ...+.+.... .++|.+|.+.|.
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~~id~vi~~ag~ 81 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTD-PEAIAAAVEQLGRLDVLVHNAGV 81 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCC-HHHHHHHHHhcCCCCEEEECCCc
Confidence 57999999999999999888777 999999998877655542 2222333333222 2233333221 268999999874
No 345
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=96.08 E-value=0.058 Score=45.48 Aligned_cols=76 Identities=28% Similarity=0.404 Sum_probs=50.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCE-EE--eCCCchHH----HHHHHHhCCCcc
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADV-CI--NYKTEDFV----ARVKEETGGKGV 209 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~-~~--~~~~~~~~----~~~~~~~~~~~~ 209 (325)
.++||+|++|.+|..++..+...|++|++++++.++.+.+.+ .+... .+ |..+.... ..+.+..+ +.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~~ 79 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFG--GL 79 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC--CC
Confidence 579999999999999999998999999999998876654432 23221 22 33332211 12222222 58
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|.+.+.
T Consensus 80 d~vi~~a~~ 88 (255)
T TIGR01963 80 DILVNNAGI 88 (255)
T ss_pred CEEEECCCC
Confidence 999988753
No 346
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=96.05 E-value=0.094 Score=47.77 Aligned_cols=73 Identities=10% Similarity=0.159 Sum_probs=53.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.+.+++|+|+ |.+|.+++..+...|+ +++++.|+.++.+.+. .++....+. .+.+.+... .+|+||+|+
T Consensus 180 ~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~------~~~l~~~l~--~aDiVI~aT 250 (414)
T PRK13940 180 SSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHY------LSELPQLIK--KADIIIAAV 250 (414)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEec------HHHHHHHhc--cCCEEEECc
Confidence 4788999998 9999999999999997 7999999987765544 454222221 233334333 589999999
Q ss_pred ChHH
Q 020487 217 GASY 220 (325)
Q Consensus 217 g~~~ 220 (325)
+.+.
T Consensus 251 ~a~~ 254 (414)
T PRK13940 251 NVLE 254 (414)
T ss_pred CCCC
Confidence 9764
No 347
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=96.05 E-value=0.034 Score=46.73 Aligned_cols=78 Identities=31% Similarity=0.372 Sum_probs=48.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhH-HHH---HHcCCCEE---EeCCCch----HHHHHHHHhCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKL-AVC---KDLGADVC---INYKTED----FVARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~-~~~---~~~g~~~~---~~~~~~~----~~~~~~~~~~~ 206 (325)
++.+++|+|++|.+|..+++.+...|++|++..+ +..+. +.. +..+.... .|..+.. ..+.+.+..+
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 80 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVG- 80 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhC-
Confidence 3578999999999999999999999999888653 22222 222 23344322 2222221 1222223333
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
++|+++.|.|.
T Consensus 81 -~id~li~~ag~ 91 (246)
T PRK12938 81 -EIDVLVNNAGI 91 (246)
T ss_pred -CCCEEEECCCC
Confidence 68999999874
No 348
>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=96.04 E-value=0.023 Score=53.21 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
+.++++++|+|. |..|++++++++..|++|++.+....+.+.+++.|... +.... ....+ ..+|+|+.+.
T Consensus 9 ~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~~~g~~~-~~~~~--~~~~l------~~~D~VV~Sp 78 (488)
T PRK03369 9 LLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHAERGVAT-VSTSD--AVQQI------ADYALVVTSP 78 (488)
T ss_pred ccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHhCCCEE-EcCcc--hHhHh------hcCCEEEECC
Confidence 457899999998 99999999999999999999987766666666777643 22111 11111 2579999998
Q ss_pred Ch
Q 020487 217 GA 218 (325)
Q Consensus 217 g~ 218 (325)
|.
T Consensus 79 Gi 80 (488)
T PRK03369 79 GF 80 (488)
T ss_pred CC
Confidence 85
No 349
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.00 E-value=0.06 Score=45.71 Aligned_cols=78 Identities=24% Similarity=0.354 Sum_probs=49.6
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecCh--hhHHHH-HHcCCC-EEE--eCCCchHHHH----HHHHhCC
Q 020487 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSE--EKLAVC-KDLGAD-VCI--NYKTEDFVAR----VKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~--~~~~~~-~~~g~~-~~~--~~~~~~~~~~----~~~~~~~ 206 (325)
.+.+++|+|+ ++++|.++++.+...|++|+++.++. +..+.+ ++++.. ..+ |-.+....+. +.+..+
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g- 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD- 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC-
Confidence 4678999998 79999999999999999999988653 333333 234321 122 3333222222 222222
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
.+|+++++.|.
T Consensus 85 -~iD~li~nAG~ 95 (256)
T PRK07889 85 -GLDGVVHSIGF 95 (256)
T ss_pred -CCcEEEEcccc
Confidence 68999998863
No 350
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=96.00 E-value=0.044 Score=48.23 Aligned_cols=76 Identities=17% Similarity=0.213 Sum_probs=49.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc----CC--C-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL----GA--D-VCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~----g~--~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
.|.+|+|+|++|.+|..++..+...|++|+++.++..+.+....+ +. . ..+..+-.+ ...+.+... ++|+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~ 80 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLE-ESSFEQAIE--GCDA 80 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCC-cchHHHHHh--CCCE
Confidence 468999999999999999999988999999988876544332211 11 1 222222111 122333332 5899
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
||.+++
T Consensus 81 vih~A~ 86 (322)
T PLN02986 81 VFHTAS 86 (322)
T ss_pred EEEeCC
Confidence 998886
No 351
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=96.00 E-value=0.023 Score=46.42 Aligned_cols=90 Identities=10% Similarity=0.075 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
.|.+|+|.|+ |.+|...+..+...|++|+++.+... ....+.+.+. ..+...... ... -.++|+||.|++
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~~~~~-i~~~~~~~~-~~~------l~~adlViaaT~ 79 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLVEEGK-IRWKQKEFE-PSD------IVDAFLVIAATN 79 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHHhCCC-EEEEecCCC-hhh------cCCceEEEEcCC
Confidence 4789999998 99999999888889999999875432 1122212221 111111100 111 136899999999
Q ss_pred hHHHHHhhccccCCCEEEEE
Q 020487 218 ASYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~ 237 (325)
.+.++..+......+.++..
T Consensus 80 d~elN~~i~~~a~~~~lvn~ 99 (202)
T PRK06718 80 DPRVNEQVKEDLPENALFNV 99 (202)
T ss_pred CHHHHHHHHHHHHhCCcEEE
Confidence 88765554433333445544
No 352
>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed
Probab=96.00 E-value=0.026 Score=45.41 Aligned_cols=95 Identities=22% Similarity=0.254 Sum_probs=59.6
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
++++.+||-+|+ +.|..+..+++.. +++|+.++.+++..+.++ +.+.+.+.- ...+. .+....+.||+
T Consensus 43 l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~-~~~d~----~~~~~~~~fDl 115 (187)
T PRK00107 43 LPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTV-VHGRA----EEFGQEEKFDV 115 (187)
T ss_pred cCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEE-EeccH----hhCCCCCCccE
Confidence 456899999997 3455555555544 679999999988766554 344432211 11111 11112347999
Q ss_pred EEeCCCh---HHHHHhhccccCCCEEEEEe
Q 020487 212 ILDCMGA---SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 212 vi~~~g~---~~~~~~~~~l~~~g~~v~~g 238 (325)
|+..... ..+..+.+.|++||+++.+-
T Consensus 116 V~~~~~~~~~~~l~~~~~~LkpGG~lv~~~ 145 (187)
T PRK00107 116 VTSRAVASLSDLVELCLPLLKPGGRFLALK 145 (187)
T ss_pred EEEccccCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9975432 23567789999999999873
No 353
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=95.98 E-value=0.051 Score=47.40 Aligned_cols=38 Identities=18% Similarity=0.245 Sum_probs=32.4
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecChhhH
Q 020487 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGSEEKL 177 (325)
Q Consensus 139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~~~~~ 177 (325)
.|.+++|+|+ ++++|.++++.+...|++|++ .+...++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 4889999999 799999999999999999998 5554443
No 354
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]
Probab=95.98 E-value=0.034 Score=47.67 Aligned_cols=92 Identities=14% Similarity=0.184 Sum_probs=58.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH-cCCCEE-EeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD-LGADVC-INYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~-~g~~~~-~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
++.+++|+|+ |+.+.+++..+...|+ +++++.|+.++.+.+.+ ++.... +.... ..+......+|++|+|
T Consensus 125 ~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~------~~~~~~~~~~dliINa 197 (283)
T COG0169 125 TGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAA------LADLEGLEEADLLINA 197 (283)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccc------ccccccccccCEEEEC
Confidence 5899999999 9999999999999996 89999999998776653 331110 00000 0000111148999999
Q ss_pred CChHHHH------HhhccccCCCEEEEE
Q 020487 216 MGASYFQ------RNLGSLNIDGRLFII 237 (325)
Q Consensus 216 ~g~~~~~------~~~~~l~~~g~~v~~ 237 (325)
++...-. ...+.+++.-.++++
T Consensus 198 Tp~Gm~~~~~~~~~~~~~l~~~~~v~D~ 225 (283)
T COG0169 198 TPVGMAGPEGDSPVPAELLPKGAIVYDV 225 (283)
T ss_pred CCCCCCCCCCCCCCcHHhcCcCCEEEEe
Confidence 8642211 003456666666665
No 355
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=95.97 E-value=0.078 Score=41.33 Aligned_cols=79 Identities=16% Similarity=0.231 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
-.|.+++|.|.+..+|.-++.++.+.|+.|+..-...+.. .+.+ +..|+|+.++|
T Consensus 34 l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l-----------------------~~~~--~~ADIVVsa~G 88 (160)
T PF02882_consen 34 LEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNL-----------------------QEIT--RRADIVVSAVG 88 (160)
T ss_dssp TTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSH-----------------------HHHH--TTSSEEEE-SS
T ss_pred CCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcc-----------------------ccee--eeccEEeeeec
Confidence 3689999999999999999999999999998876432222 1122 25899999999
Q ss_pred hHHHHHhhccccCCCEEEEEeccCC
Q 020487 218 ASYFQRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 218 ~~~~~~~~~~l~~~g~~v~~g~~~~ 242 (325)
.+.+-. .++++++..++.+|....
T Consensus 89 ~~~~i~-~~~ik~gavVIDvG~~~~ 112 (160)
T PF02882_consen 89 KPNLIK-ADWIKPGAVVIDVGINYV 112 (160)
T ss_dssp STT-B--GGGS-TTEEEEE--CEEE
T ss_pred cccccc-cccccCCcEEEecCCccc
Confidence 876522 468899999999887554
No 356
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=95.97 E-value=0.11 Score=42.42 Aligned_cols=79 Identities=20% Similarity=0.257 Sum_probs=54.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
.|.+++|+|. |.+|..+++.+...|++|++.+++.++.+.+.+ +++. .++.. +.. ...+|+++.|..
T Consensus 27 ~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~-~v~~~---------~l~-~~~~Dv~vp~A~ 94 (200)
T cd01075 27 EGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT-VVAPE---------EIY-SVDADVFAPCAL 94 (200)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE-EEcch---------hhc-cccCCEEEeccc
Confidence 4789999998 899999999999999999999988887766654 4643 33321 111 125899997754
Q ss_pred hHH-HHHhhcccc
Q 020487 218 ASY-FQRNLGSLN 229 (325)
Q Consensus 218 ~~~-~~~~~~~l~ 229 (325)
... ....++.|+
T Consensus 95 ~~~I~~~~~~~l~ 107 (200)
T cd01075 95 GGVINDDTIPQLK 107 (200)
T ss_pred ccccCHHHHHHcC
Confidence 432 234445554
No 357
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=95.97 E-value=0.06 Score=45.24 Aligned_cols=78 Identities=23% Similarity=0.355 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH----HHcCCCE-EE--eCCCchHH----HHHHHHhCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC----KDLGADV-CI--NYKTEDFV----ARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~----~~~g~~~-~~--~~~~~~~~----~~~~~~~~~ 206 (325)
.+.+++|+|++|.+|..++..+...|++|+++.+ ++++.+.. +..+... .+ |..+.... +.+.+..+
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~- 83 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFG- 83 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC-
Confidence 3689999999999999999988889999987654 33333322 2233322 22 22222211 22222222
Q ss_pred CcccEEEeCCCh
Q 020487 207 KGVDVILDCMGA 218 (325)
Q Consensus 207 ~~~d~vi~~~g~ 218 (325)
.+|.++.|.|.
T Consensus 84 -~id~vi~~ag~ 94 (247)
T PRK12935 84 -KVDILVNNAGI 94 (247)
T ss_pred -CCCEEEECCCC
Confidence 58999998874
No 358
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.96 E-value=0.065 Score=45.93 Aligned_cols=45 Identities=38% Similarity=0.479 Sum_probs=40.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD 182 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 182 (325)
+|...++|+|++.++|++++..++..|++|.++.++.+++..+++
T Consensus 31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~ 75 (331)
T KOG1210|consen 31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKA 75 (331)
T ss_pred CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHh
Confidence 455789999999999999999999999999999999999887763
No 359
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=95.95 E-value=0.047 Score=46.02 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
.+.++||+|++|.+|..++..+...|++|+++.++.
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~ 42 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF 42 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch
Confidence 468899999999999999999999999999999775
No 360
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=95.92 E-value=0.062 Score=47.20 Aligned_cols=79 Identities=19% Similarity=0.308 Sum_probs=51.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcC---CC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLG---AD-VCI--NYKTEDFVARVKEET--GGKGV 209 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g---~~-~~~--~~~~~~~~~~~~~~~--~~~~~ 209 (325)
+.+++|+|+++++|.+++..+...| ++|++++++.++.+.+. ++. .. ..+ |-.+....+.+.+.. ...++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 5689999999999999999888889 89999999887665443 332 11 122 333322222222211 12368
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++|.+.|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998763
No 361
>PRK08618 ornithine cyclodeaminase; Validated
Probab=95.92 E-value=0.1 Score=46.04 Aligned_cols=101 Identities=15% Similarity=0.129 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHH-HHCCC-EEEEEecChhhHHHHH-H----cCCCEEEeCCCchHHHHHHHHhCCCccc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMG-KCQGV-RVFVTAGSEEKLAVCK-D----LGADVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a-~~~g~-~v~~~~~~~~~~~~~~-~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
....+++|+|+ |..|...+..+ ...++ +|.+..++.++.+.+. . ++.. +....+ . .+.. ...|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~~--~----~~~~--~~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVNS--A----DEAI--EEAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeCC--H----HHHH--hcCC
Confidence 45678999998 98987776554 45576 7888888888776543 2 2332 111111 1 2222 2689
Q ss_pred EEEeCCChHHHHHhhccccCCCEEEEEeccCCcccccch
Q 020487 211 VILDCMGASYFQRNLGSLNIDGRLFIIGTQGGAKTELNI 249 (325)
Q Consensus 211 ~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~ 249 (325)
+|+.|++.....-. +++++|-.+..+|.......+++.
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~p~~~E~~~ 232 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFMPDMQELPS 232 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCCcccccCCH
Confidence 99999987553333 889999999999876654444554
No 362
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=95.92 E-value=0.076 Score=45.21 Aligned_cols=77 Identities=17% Similarity=0.352 Sum_probs=48.0
Q ss_pred CCCEEEEEcC--CchHHHHHHHHHHHCCCEEEEEecC---hhhHHHH-HHcCCCEEE--eCCCchHH----HHHHHHhCC
Q 020487 139 PGESFLVHGG--SSGIGTFAIQMGKCQGVRVFVTAGS---EEKLAVC-KDLGADVCI--NYKTEDFV----ARVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~--~g~~G~~~~~~a~~~g~~v~~~~~~---~~~~~~~-~~~g~~~~~--~~~~~~~~----~~~~~~~~~ 206 (325)
.+.+++|+|+ ++++|.++++.+...|++|+++.+. +++.+.+ ++++....+ |-.+.... +.+.+..+
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g- 83 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWD- 83 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhC-
Confidence 4788999996 5799999999999899999987543 2333322 234432222 33332222 22222233
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
.+|+++++.|
T Consensus 84 -~iD~lvnnAG 93 (260)
T PRK06997 84 -GLDGLVHSIG 93 (260)
T ss_pred -CCcEEEEccc
Confidence 6899999876
No 363
>PRK07102 short chain dehydrogenase; Provisional
Probab=95.92 E-value=0.059 Score=45.24 Aligned_cols=77 Identities=21% Similarity=0.252 Sum_probs=49.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-H---cCC-C-EEE--eCCCchHHHHHHHHhCCCcccEE
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-D---LGA-D-VCI--NYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~---~g~-~-~~~--~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
.+++|+|++|.+|..+++.+...|++|+++++++++.+... + .+. . .++ |-.+......+.+... ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 47999999999999999999999999999999887654332 1 111 1 122 2222222222222222 246999
Q ss_pred EeCCCh
Q 020487 213 LDCMGA 218 (325)
Q Consensus 213 i~~~g~ 218 (325)
+.+.|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 987763
No 364
>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.91 E-value=0.69 Score=39.68 Aligned_cols=95 Identities=17% Similarity=0.192 Sum_probs=65.1
Q ss_pred CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +..+++ .|.+++|.|.+..+|.-++.++...|++|++.-... .+
T Consensus 137 ~PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t-------------------~~--- 193 (285)
T PRK14191 137 VPATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILT-------------------KD--- 193 (285)
T ss_pred CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCc-------------------HH---
Confidence 344433333333 443443 599999999977999999999999999998763211 11
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+.+ +.+|+++-++|.+.+.. -+++++|..++.+|...
T Consensus 194 -l~~~~--~~ADIvV~AvG~p~~i~-~~~vk~GavVIDvGi~~ 232 (285)
T PRK14191 194 -LSFYT--QNADIVCVGVGKPDLIK-ASMVKKGAVVVDIGINR 232 (285)
T ss_pred -HHHHH--HhCCEEEEecCCCCcCC-HHHcCCCcEEEEeeccc
Confidence 12222 25899999999876522 45789999999998643
No 365
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=95.90 E-value=0.29 Score=44.19 Aligned_cols=93 Identities=19% Similarity=0.277 Sum_probs=63.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHH-HHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAV-CKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.+.++|++|+ |-+|..++..+...|+ +|+++.|+.++... ++++|+..+. .+++..... .+|+||.++
T Consensus 177 ~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~~-------l~el~~~l~--~~DvVissT 246 (414)
T COG0373 177 KDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAVA-------LEELLEALA--EADVVISST 246 (414)
T ss_pred ccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeeec-------HHHHHHhhh--hCCEEEEec
Confidence 5788999999 9999999999999996 89999999887754 5678854332 233344443 689999998
Q ss_pred ChHH--H--HHhhccccCCC--EEEEEeccC
Q 020487 217 GASY--F--QRNLGSLNIDG--RLFIIGTQG 241 (325)
Q Consensus 217 g~~~--~--~~~~~~l~~~g--~~v~~g~~~ 241 (325)
+.+. + ....+.+++.- -+++++.+-
T Consensus 247 sa~~~ii~~~~ve~a~~~r~~~livDiavPR 277 (414)
T COG0373 247 SAPHPIITREMVERALKIRKRLLIVDIAVPR 277 (414)
T ss_pred CCCccccCHHHHHHHHhcccCeEEEEecCCC
Confidence 8753 1 23334444433 345665544
No 366
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=95.88 E-value=0.13 Score=36.21 Aligned_cols=85 Identities=18% Similarity=0.194 Sum_probs=56.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC---CEEEEE-ecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQG---VRVFVT-AGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g---~~v~~~-~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
+|.++|+ |.+|.+++.-+...| .+|+.+ .+++++.+.+. +++...... +..+.+ + ..|++|-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~----~~~~~~-~-----~advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD----DNEEAA-Q-----EADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE----EHHHHH-H-----HTSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC----ChHHhh-c-----cCCEEEEEE
Confidence 4778887 999999999999999 899955 89998887765 555432221 112222 1 479999999
Q ss_pred ChHHHHHhhcc---ccCCCEEEEE
Q 020487 217 GASYFQRNLGS---LNIDGRLFII 237 (325)
Q Consensus 217 g~~~~~~~~~~---l~~~g~~v~~ 237 (325)
....+...++. ..++..++++
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 98766555444 4455666655
No 367
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=95.87 E-value=0.039 Score=43.89 Aligned_cols=77 Identities=27% Similarity=0.416 Sum_probs=52.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH-HHHHcCC--CE-EEeCC--Cch----HHHHHHHHhCCCcc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA-VCKDLGA--DV-CINYK--TED----FVARVKEETGGKGV 209 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~-~~~~~g~--~~-~~~~~--~~~----~~~~~~~~~~~~~~ 209 (325)
....+|+|+++++|.+..+.+...|++|.+.+...+..+ .++.++. ++ .+..+ ... ..+++.+..| ..
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g--~p 91 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLG--TP 91 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcC--CC
Confidence 456789999999999999999999999999997766443 4456664 22 22222 111 1223333344 68
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
+++++|.|.
T Consensus 92 svlVncAGI 100 (256)
T KOG1200|consen 92 SVLVNCAGI 100 (256)
T ss_pred cEEEEcCcc
Confidence 999999985
No 368
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.87 E-value=0.054 Score=45.39 Aligned_cols=77 Identities=25% Similarity=0.446 Sum_probs=49.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHHH----HcCCC-EEE--eCCCchHHH----HHHHHhCCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVCK----DLGAD-VCI--NYKTEDFVA----RVKEETGGK 207 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~----~~~~~~~~~ 207 (325)
+.+++|+|++|.+|..++..+...|++|+++ .++.++.+... ..+.. .++ |..+..... .+.+..+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~-- 82 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFG-- 82 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhC--
Confidence 5689999999999999999888889999998 87766554332 22222 122 222222111 2222222
Q ss_pred cccEEEeCCCh
Q 020487 208 GVDVILDCMGA 218 (325)
Q Consensus 208 ~~d~vi~~~g~ 218 (325)
++|.+|.+.|.
T Consensus 83 ~id~vi~~ag~ 93 (247)
T PRK05565 83 KIDILVNNAGI 93 (247)
T ss_pred CCCEEEECCCc
Confidence 58999998863
No 369
>PLN02781 Probable caffeoyl-CoA O-methyltransferase
Probab=95.86 E-value=0.12 Score=43.35 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=64.1
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhC--
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG-- 205 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~-- 205 (325)
..+..+.+++|-.|. ..|..++.+++.+ +.+|+.++.+++..+.++ +.|...-+.....+..+.+.+...
T Consensus 63 l~~~~~~~~vLEiGt--~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~gda~~~L~~l~~~~ 140 (234)
T PLN02781 63 LVKIMNAKNTLEIGV--FTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQSDALSALDQLLNND 140 (234)
T ss_pred HHHHhCCCEEEEecC--cccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEccHHHHHHHHHhCC
Confidence 445567889999984 5677777777766 359999999988776665 344322111112222333333321
Q ss_pred -CCcccEEEeCCCh----HHHHHhhccccCCCEEEE
Q 020487 206 -GKGVDVILDCMGA----SYFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 206 -~~~~d~vi~~~g~----~~~~~~~~~l~~~g~~v~ 236 (325)
.+.||+||--... ..+..+++.+++||.++.
T Consensus 141 ~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~ 176 (234)
T PLN02781 141 PKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAF 176 (234)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 3479999865543 235677889999998775
No 370
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=95.82 E-value=0.069 Score=45.37 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=31.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
.+++++|+|+++++|.+++..+...|++|+++.++
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~ 41 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNS 41 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCC
Confidence 47899999999999999999999999999888643
No 371
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.82 E-value=0.075 Score=44.48 Aligned_cols=37 Identities=30% Similarity=0.327 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
+..++||+|++|.+|..++..+...|++|+++.++..
T Consensus 5 ~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~ 41 (249)
T PRK12825 5 MGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDE 41 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCH
Confidence 3568999999999999999999999999888666544
No 372
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=95.80 E-value=0.065 Score=52.29 Aligned_cols=112 Identities=21% Similarity=0.304 Sum_probs=68.2
Q ss_pred eeeEEeecCCceeeCCCCCCHHhhccCcchHHHHHHHHHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 94 YAEKVAVPAGQVLPVPSGVSLKDAAAFPEVACTVWSTVFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~p~~~~~~~aa~l~~~~~~a~~~l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
..+|..+++...+.+ +..+++++=.-..+ ...--.+.+++|+|++|.+|.++++.+...|++|++++++
T Consensus 379 ~~~~~~~~~~~~f~~-eyw~~e~~kl~~~~----------~~~~l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~ 447 (676)
T TIGR02632 379 VSEYVSLPEQEAFDI-EYWPLEEAKLRRMP----------KEKTLARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLN 447 (676)
T ss_pred ccceecCchhhccch-hhhhhhHHhhccCC----------CCcCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCC
Confidence 456767777777766 55555555210000 0011237899999999999999999999999999999988
Q ss_pred hhhHHHHH-H----cCCCE--EE--eCCCchHHHH----HHHHhCCCcccEEEeCCCh
Q 020487 174 EEKLAVCK-D----LGADV--CI--NYKTEDFVAR----VKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 174 ~~~~~~~~-~----~g~~~--~~--~~~~~~~~~~----~~~~~~~~~~d~vi~~~g~ 218 (325)
.++.+... + .+... .+ |-.+...... +.+..+ ++|+++.+.|.
T Consensus 448 ~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g--~iDilV~nAG~ 503 (676)
T TIGR02632 448 LEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG--GVDIVVNNAGI 503 (676)
T ss_pred HHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC--CCcEEEECCCC
Confidence 77654432 2 23211 22 2222222222 222222 68999999874
No 373
>PRK12746 short chain dehydrogenase; Provisional
Probab=95.79 E-value=0.077 Score=44.80 Aligned_cols=38 Identities=26% Similarity=0.313 Sum_probs=32.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhH
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKL 177 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~ 177 (325)
+.+++|+|++|.+|..+++.+...|++|++. .++.++.
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~ 44 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAA 44 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHH
Confidence 5789999999999999999998899998775 5666544
No 374
>PLN02214 cinnamoyl-CoA reductase
Probab=95.78 E-value=0.077 Score=47.21 Aligned_cols=78 Identities=15% Similarity=0.230 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH--HHHHcC---CC-EEEeCCCchHHHHHHHHhCCCcccE
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA--VCKDLG---AD-VCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~--~~~~~g---~~-~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
.++.+++|+|++|.+|..++..+...|++|++++++.++.. ..+.+. .. ..+..+-.+ ...+.+... ++|+
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~ 84 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNTHLRELEGGKERLILCKADLQD-YEALKAAID--GCDG 84 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHHHHHHhhCCCCcEEEEecCcCC-hHHHHHHHh--cCCE
Confidence 34678999999999999999999999999999998765321 122221 11 122222111 223333333 5899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
||.+++.
T Consensus 85 Vih~A~~ 91 (342)
T PLN02214 85 VFHTASP 91 (342)
T ss_pred EEEecCC
Confidence 9999863
No 375
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=95.77 E-value=0.035 Score=49.26 Aligned_cols=37 Identities=16% Similarity=0.218 Sum_probs=32.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
++.++||+|++|.+|..+++.+...|++|+++.+...
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 3678999999999999999999999999999887543
No 376
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=95.77 E-value=0.082 Score=44.92 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
.+.+++|+|+++.+|..+++.+...|++|+++.++.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~ 41 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSD 41 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCC
Confidence 478999999999999999999999999999887754
No 377
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=95.76 E-value=0.095 Score=47.50 Aligned_cols=90 Identities=20% Similarity=0.306 Sum_probs=58.2
Q ss_pred EEEEcCCchHHHHHHHHHHHCC-C-EEEEEecChhhHHHHHH--cCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQG-V-RVFVTAGSEEKLAVCKD--LGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g-~-~v~~~~~~~~~~~~~~~--~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+ .+.. .....+..+ ...+.+... +.|+|++|+|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~l~~~~~--~~dvVin~~g 76 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVND-PESLAELLR--GCDVVINCAG 76 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTT-HHHHHHHHT--TSSEEEE-SS
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCC-HHHHHHHHh--cCCEEEECCc
Confidence 689999 999999999998775 4 89999999999776653 2222 222222222 233566654 5699999999
Q ss_pred hHHHH-HhhccccCCCEEEE
Q 020487 218 ASYFQ-RNLGSLNIDGRLFI 236 (325)
Q Consensus 218 ~~~~~-~~~~~l~~~g~~v~ 236 (325)
..... -+-.|+..+-.+++
T Consensus 77 p~~~~~v~~~~i~~g~~yvD 96 (386)
T PF03435_consen 77 PFFGEPVARACIEAGVHYVD 96 (386)
T ss_dssp GGGHHHHHHHHHHHT-EEEE
T ss_pred cchhHHHHHHHHHhCCCeec
Confidence 76433 33456777778887
No 378
>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.74 E-value=0.099 Score=44.74 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=66.3
Q ss_pred CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
.|+........| +..++. .|.+++|+|-+..+|.-+++++...|++|++.-... .+
T Consensus 139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T-------------------~~--- 195 (285)
T PRK10792 139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFT-------------------KN--- 195 (285)
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCC-------------------CC---
Confidence 344433444334 443432 589999999988899999999999999998876331 11
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+.+ +.+|+++.++|.+.+-. -++++++..++.+|...
T Consensus 196 -l~~~~--~~ADIvi~avG~p~~v~-~~~vk~gavVIDvGin~ 234 (285)
T PRK10792 196 -LRHHV--RNADLLVVAVGKPGFIP-GEWIKPGAIVIDVGINR 234 (285)
T ss_pred -HHHHH--hhCCEEEEcCCCccccc-HHHcCCCcEEEEccccc
Confidence 22222 26899999999876422 37889999999998543
No 379
>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional
Probab=95.73 E-value=0.11 Score=39.51 Aligned_cols=77 Identities=14% Similarity=0.098 Sum_probs=58.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.++.|+|.+..+|.-++.++...|++|+......... .+.. +..|+++.++|.
T Consensus 27 ~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l-----------------------~~~v--~~ADIVvsAtg~ 81 (140)
T cd05212 27 DGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQL-----------------------QSKV--HDADVVVVGSPK 81 (140)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCH-----------------------HHHH--hhCCEEEEecCC
Confidence 589999999999999999999999999999887432211 1111 258999999998
Q ss_pred HHHHHhhccccCCCEEEEEeccC
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
..+ ---+++++|..++.+|...
T Consensus 82 ~~~-i~~~~ikpGa~Vidvg~~~ 103 (140)
T cd05212 82 PEK-VPTEWIKPGATVINCSPTK 103 (140)
T ss_pred CCc-cCHHHcCCCCEEEEcCCCc
Confidence 743 2246899999999887544
No 380
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.72 E-value=0.085 Score=45.19 Aligned_cols=77 Identities=17% Similarity=0.238 Sum_probs=58.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+++|.|.+..+|.-++.++...|++|++.-.. ..+. .+.+ +..|+++-++|.
T Consensus 157 ~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~-------------------t~~l----~~~~--~~ADIVV~avG~ 211 (285)
T PRK14189 157 RGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK-------------------TRDL----AAHT--RQADIVVAAVGK 211 (285)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC-------------------CCCH----HHHh--hhCCEEEEcCCC
Confidence 58999999998888999999999999999875321 1122 2222 258999999998
Q ss_pred HHHHHhhccccCCCEEEEEeccC
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+-. -++++++..++.+|...
T Consensus 212 ~~~i~-~~~ik~gavVIDVGin~ 233 (285)
T PRK14189 212 RNVLT-ADMVKPGATVIDVGMNR 233 (285)
T ss_pred cCccC-HHHcCCCCEEEEccccc
Confidence 76422 37899999999998654
No 381
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=95.70 E-value=0.071 Score=39.84 Aligned_cols=87 Identities=13% Similarity=0.128 Sum_probs=52.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHHHH-cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKD-LGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
+.-+|.|+|+ |.+|..+...++..|..|..+. ++.+..+.+.. ++...+.+..+ .. ..+|++|-++
T Consensus 9 ~~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~---------~~--~~aDlv~iav 76 (127)
T PF10727_consen 9 ARLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE---------IL--RDADLVFIAV 76 (127)
T ss_dssp ---EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG---------GG--CC-SEEEE-S
T ss_pred CccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc---------cc--ccCCEEEEEe
Confidence 3467999998 9999999999999999998875 44445555543 44433332211 11 2689999999
Q ss_pred ChHHHHHhhccccCC-----CEEEEE
Q 020487 217 GASYFQRNLGSLNID-----GRLFII 237 (325)
Q Consensus 217 g~~~~~~~~~~l~~~-----g~~v~~ 237 (325)
.++.+....+.|... |++|.-
T Consensus 77 pDdaI~~va~~La~~~~~~~g~iVvH 102 (127)
T PF10727_consen 77 PDDAIAEVAEQLAQYGAWRPGQIVVH 102 (127)
T ss_dssp -CCHHHHHHHHHHCC--S-TT-EEEE
T ss_pred chHHHHHHHHHHHHhccCCCCcEEEE
Confidence 998877776666543 555543
No 382
>PRK05855 short chain dehydrogenase; Validated
Probab=95.70 E-value=0.066 Score=51.18 Aligned_cols=80 Identities=20% Similarity=0.202 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh--CCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET--GGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~--~~~~~ 209 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.++.++.+.+. ..|.. ..+ |-.+......+.+.. ....+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999999999999999999887665432 23432 222 323322222222211 11268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999874
No 383
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=95.70 E-value=0.076 Score=46.77 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH---Hc-CC---CEEEeCCCchHHHHHHHHhCCCccc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK---DL-GA---DVCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~---~~-g~---~~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
..+.++||+|++|.+|..++..+...|++|++++++..+..... .. +. -..+..+-.+ ...+.+... ++|
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d-~~~~~~~~~--~~d 79 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLD-EGSFELAID--GCE 79 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCC-chHHHHHHc--CCC
Confidence 34789999999999999999999999999998887765433221 11 11 1222222111 122333332 589
Q ss_pred EEEeCCC
Q 020487 211 VILDCMG 217 (325)
Q Consensus 211 ~vi~~~g 217 (325)
+++.+++
T Consensus 80 ~vih~A~ 86 (325)
T PLN02989 80 TVFHTAS 86 (325)
T ss_pred EEEEeCC
Confidence 9999886
No 384
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=95.69 E-value=0.11 Score=46.34 Aligned_cols=77 Identities=17% Similarity=0.224 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
..+.+|||+|++|.+|..+++.+...|++|+++.++..+...+. .+ +.. .++..+-.+ ...+.+... ++|.||
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~--~~d~Vi 84 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQE-EGSFDEAVK--GCDGVF 84 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCC-HHHHHHHHc--CCCEEE
Confidence 34678999999999999999999999999999988766544332 22 111 122222222 223334333 589999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
.+++
T Consensus 85 h~A~ 88 (353)
T PLN02896 85 HVAA 88 (353)
T ss_pred ECCc
Confidence 8876
No 385
>PLN00016 RNA-binding protein; Provisional
Probab=95.69 E-value=0.048 Score=49.28 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=60.9
Q ss_pred CCEEEEE----cCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH-----------HHcCCCEEEeCCCchHHHHHHHHh
Q 020487 140 GESFLVH----GGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC-----------KDLGADVCINYKTEDFVARVKEET 204 (325)
Q Consensus 140 ~~~vli~----g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~-----------~~~g~~~~~~~~~~~~~~~~~~~~ 204 (325)
..+|||+ |++|-+|..++..+...|.+|++++++....... ...+...+ ..+.. ++.+..
T Consensus 52 ~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~~v-~~D~~----d~~~~~ 126 (378)
T PLN00016 52 KKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVKTV-WGDPA----DVKSKV 126 (378)
T ss_pred cceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhhhcCceEE-EecHH----HHHhhh
Confidence 4679999 9999999999999999999999999886543211 12233322 11111 133333
Q ss_pred CCCcccEEEeCCChH--HHHHhhccccCC--CEEEEEec
Q 020487 205 GGKGVDVILDCMGAS--YFQRNLGSLNID--GRLFIIGT 239 (325)
Q Consensus 205 ~~~~~d~vi~~~g~~--~~~~~~~~l~~~--g~~v~~g~ 239 (325)
...++|+|+++.+.. ....+++.++.. .++|.++.
T Consensus 127 ~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS 165 (378)
T PLN00016 127 AGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSS 165 (378)
T ss_pred ccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 345799999998743 234555555433 37877654
No 386
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=95.68 E-value=0.037 Score=46.05 Aligned_cols=73 Identities=16% Similarity=0.257 Sum_probs=50.6
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCE-EEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADV-CINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
|||+|++|-+|..++..+...|..|+.+.+.......... ..... ..|..+......+.+. ..+|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~---~~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEK---ANIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHH---HTESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeeccccccccccccc---cCceEEEEeecc
Confidence 7999999999999999999999999988877776654443 22221 2244443333333332 268999998874
No 387
>PRK09135 pteridine reductase; Provisional
Probab=95.68 E-value=0.092 Score=44.05 Aligned_cols=36 Identities=22% Similarity=0.315 Sum_probs=32.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
.+.+++|+|++|.+|..+++.+...|++|++++++.
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~ 40 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRS 40 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCC
Confidence 457899999999999999999998999999999753
No 388
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=95.66 E-value=0.12 Score=44.62 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=58.1
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (325)
+|.|+|. |.+|...+..++..|.+|++.+++++..+.+.+.|..... .... +.. ...|+||-|+.....
T Consensus 2 ~I~IIG~-G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a~~~g~~~~~---~~~~-----~~~--~~aDlVilavp~~~~ 70 (279)
T PRK07417 2 KIGIVGL-GLIGGSLGLDLRSLGHTVYGVSRRESTCERAIERGLVDEA---STDL-----SLL--KDCDLVILALPIGLL 70 (279)
T ss_pred eEEEEee-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCcccc---cCCH-----hHh--cCCCEEEEcCCHHHH
Confidence 5889997 9999999998888899999999998888888776642111 1111 111 257999999987553
Q ss_pred H----HhhccccCCCEEEEEec
Q 020487 222 Q----RNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 222 ~----~~~~~l~~~g~~v~~g~ 239 (325)
. .+...++++..+..+++
T Consensus 71 ~~~~~~l~~~l~~~~ii~d~~S 92 (279)
T PRK07417 71 LPPSEQLIPALPPEAIVTDVGS 92 (279)
T ss_pred HHHHHHHHHhCCCCcEEEeCcc
Confidence 3 33344455544444443
No 389
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=95.66 E-value=0.078 Score=44.74 Aligned_cols=75 Identities=28% Similarity=0.360 Sum_probs=49.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH----HHcCCCE-EE--eCCCchHHHH----HHHHhCCCccc
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC----KDLGADV-CI--NYKTEDFVAR----VKEETGGKGVD 210 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~----~~~~~~~~~~d 210 (325)
+++|+|++|.+|..+++.+...|++|+++.++.++.+.. +..+... .+ |-.+...... +.+..+ .+|
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~--~id 79 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFG--GFD 79 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC--CCC
Confidence 689999999999999999999999999999887655433 2233221 22 3233222222 222222 589
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 80 ~vi~~ag~ 87 (254)
T TIGR02415 80 VMVNNAGV 87 (254)
T ss_pred EEEECCCc
Confidence 99998864
No 390
>PRK11207 tellurite resistance protein TehB; Provisional
Probab=95.64 E-value=0.037 Score=45.00 Aligned_cols=95 Identities=16% Similarity=0.073 Sum_probs=58.5
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
...++.+||-.|+ +.|..+..+++. |.+|++++.++...+.+++ .+...+. ....+ +.+..-...||+
T Consensus 27 ~~~~~~~vLDiGc--G~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~-~~~~d----~~~~~~~~~fD~ 98 (197)
T PRK11207 27 KVVKPGKTLDLGC--GNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLH-TAVVD----LNNLTFDGEYDF 98 (197)
T ss_pred ccCCCCcEEEECC--CCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcce-EEecC----hhhCCcCCCcCE
Confidence 4456788999997 347777777775 8899999999887666553 2222111 00111 111111236999
Q ss_pred EEeCCCh---------HHHHHhhccccCCCEEEEEe
Q 020487 212 ILDCMGA---------SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 212 vi~~~g~---------~~~~~~~~~l~~~g~~v~~g 238 (325)
|+.+..- ..+..+.+.|+|||.++.+.
T Consensus 99 I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~ 134 (197)
T PRK11207 99 ILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 134 (197)
T ss_pred EEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 9876431 22567778899999965543
No 391
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=95.64 E-value=0.11 Score=43.21 Aligned_cols=79 Identities=18% Similarity=0.225 Sum_probs=58.4
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH--cCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChH
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD--LGADVCINYKTEDFVARVKEETGGKGVDVILDCMGAS 219 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~ 219 (325)
+++|.|+ |.+|..+++.+...|.+|+++.+++++...... +.. +++..+..+ . ...+..|-..+|.++.+.|.+
T Consensus 2 ~iiIiG~-G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~-~~v~gd~t~-~-~~L~~agi~~aD~vva~t~~d 77 (225)
T COG0569 2 KIIIIGA-GRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDT-HVVIGDATD-E-DVLEEAGIDDADAVVAATGND 77 (225)
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcce-EEEEecCCC-H-HHHHhcCCCcCCEEEEeeCCC
Confidence 5889998 999999999999999999999999998877433 544 344333332 2 334445666899999999986
Q ss_pred HHHHh
Q 020487 220 YFQRN 224 (325)
Q Consensus 220 ~~~~~ 224 (325)
..+..
T Consensus 78 ~~N~i 82 (225)
T COG0569 78 EVNSV 82 (225)
T ss_pred HHHHH
Confidence 54433
No 392
>PRK12827 short chain dehydrogenase; Provisional
Probab=95.61 E-value=0.1 Score=43.70 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=29.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~ 172 (325)
+.+++|+|++|.+|..++..+...|++|+++.+
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~ 38 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDI 38 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcC
Confidence 578999999999999999999999999988664
No 393
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=95.60 E-value=0.097 Score=40.56 Aligned_cols=94 Identities=16% Similarity=0.144 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHH-HHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVC-KDLGADVCINYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.++.+++|+|+ |.+|...++.+...| .+|++..++.++.+.+ ++++... +.....+. .+. -+++|+++.|
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~-~~~~~~~~----~~~--~~~~Dvvi~~ 88 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELG-IAIAYLDL----EEL--LAEADLIINT 88 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcc-cceeecch----hhc--cccCCEEEeC
Confidence 44688999998 999999999998886 6899999888776554 3444321 00001111 111 1368999999
Q ss_pred CChHHH-----HHhhccccCCCEEEEEec
Q 020487 216 MGASYF-----QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 216 ~g~~~~-----~~~~~~l~~~g~~v~~g~ 239 (325)
++.... ......++++..++.++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 89 TPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 886542 111234566777777643
No 394
>PLN02244 tocopherol O-methyltransferase
Probab=95.60 E-value=0.028 Score=49.89 Aligned_cols=94 Identities=15% Similarity=0.093 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCCccc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
+++++||=+|+ +.|..+..+++..|++|+.++.++...+.+++ .+.. .+...+.... -...+.||
T Consensus 117 ~~~~~VLDiGC--G~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~------~~~~~~FD 188 (340)
T PLN02244 117 KRPKRIVDVGC--GIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQ------PFEDGQFD 188 (340)
T ss_pred CCCCeEEEecC--CCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccC------CCCCCCcc
Confidence 67889999986 45777888888889999999999887766543 2321 1222111110 01234799
Q ss_pred EEEeCCCh-------HHHHHhhccccCCCEEEEEec
Q 020487 211 VILDCMGA-------SYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 211 ~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~ 239 (325)
+|+..... ..+..+.+.|+|||+++....
T Consensus 189 ~V~s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 189 LVWSMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred EEEECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 99865432 235777899999999988643
No 395
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.59 E-value=0.075 Score=44.89 Aligned_cols=76 Identities=20% Similarity=0.330 Sum_probs=48.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHH----HHHHcCCC-EEE--eCCCchHHH----HHHHHhCCCc
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLA----VCKDLGAD-VCI--NYKTEDFVA----RVKEETGGKG 208 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~----~~~~~g~~-~~~--~~~~~~~~~----~~~~~~~~~~ 208 (325)
.+++|+|++|.+|..++..+...|++|++++++.. ..+ .++..+.. ..+ |..+..... .+.+..+ .
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~ 80 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWG--R 80 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence 57999999999999999999999999999987543 221 22223322 222 333322222 2222223 5
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++.|.|.
T Consensus 81 id~vi~~ag~ 90 (256)
T PRK12745 81 IDCLVNNAGV 90 (256)
T ss_pred CCEEEECCcc
Confidence 8999999863
No 396
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=95.58 E-value=0.11 Score=45.88 Aligned_cols=76 Identities=18% Similarity=0.188 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCC--CEEEEEecChhhHHHHH-HcCC-C-EEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSEEKLAVCK-DLGA-D-VCINYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~~~~~~~~-~~g~-~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
+.++||+|++|.+|..+++.+...| .+|++++++..+...+. .+.. . ..+..+-.+ ...+.+... ++|++|.
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d-~~~l~~~~~--~iD~Vih 80 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRD-KERLTRALR--GVDYVVH 80 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCC-HHHHHHHHh--cCCEEEE
Confidence 6789999999999999998887765 68998887765543332 2221 1 222222222 233444443 5899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
+++.
T Consensus 81 ~Ag~ 84 (324)
T TIGR03589 81 AAAL 84 (324)
T ss_pred Cccc
Confidence 8863
No 397
>PLN03075 nicotianamine synthase; Provisional
Probab=95.58 E-value=0.097 Score=45.10 Aligned_cols=95 Identities=13% Similarity=0.050 Sum_probs=63.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHcC-----CCEEEeCCCchHHHHHHHHh-CCCccc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDLG-----ADVCINYKTEDFVARVKEET-GGKGVD 210 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~~~~~~~~~~-~~~~~d 210 (325)
+.++|+-+|+ |+.++.++.+++.+ +.+++.++.+++..+.+++.- ...-+.....+. .+.. ....||
T Consensus 123 ~p~~VldIGc-Gpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da----~~~~~~l~~FD 197 (296)
T PLN03075 123 VPTKVAFVGS-GPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADV----MDVTESLKEYD 197 (296)
T ss_pred CCCEEEEECC-CCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECch----hhcccccCCcC
Confidence 7789999997 88898888888665 458999999999887776532 111111111111 1111 124799
Q ss_pred EEEeCC------Ch--HHHHHhhccccCCCEEEEEe
Q 020487 211 VILDCM------GA--SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 211 ~vi~~~------g~--~~~~~~~~~l~~~g~~v~~g 238 (325)
+||-.+ .. ..+..+.+.|+|||.++.-.
T Consensus 198 lVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 198 VVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 998775 12 23678889999999998764
No 398
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.58 E-value=0.2 Score=42.85 Aligned_cols=89 Identities=17% Similarity=0.225 Sum_probs=64.2
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+++|.|.+..+|.-++.++...|++|++.-.. ..+. .+.+ +.+|+++-++|.
T Consensus 158 ~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~-------------------T~~l----~~~~--~~ADIvIsAvGk 212 (284)
T PRK14177 158 TGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSK-------------------TQNL----PSIV--RQADIIVGAVGK 212 (284)
T ss_pred CCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCC-------------------CCCH----HHHH--hhCCEEEEeCCC
Confidence 58999999999999999999999999999876522 1121 2222 258999999998
Q ss_pred HHHHHhhccccCCCEEEEEeccCCcccccchHHHH
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQGGAKTELNITSLF 253 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~ 253 (325)
+.+-. -+++++|..++++|.......+.++....
T Consensus 213 ~~~i~-~~~ik~gavVIDvGin~~~~GDVd~~~v~ 246 (284)
T PRK14177 213 PEFIK-ADWISEGAVLLDAGYNPGNVGDIEISKAK 246 (284)
T ss_pred cCccC-HHHcCCCCEEEEecCcccccCCcCHHHHh
Confidence 77522 57899999999998754222344444433
No 399
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=95.58 E-value=0.14 Score=45.77 Aligned_cols=79 Identities=20% Similarity=0.213 Sum_probs=50.0
Q ss_pred CCCCEEEEEcCCchHHHH--HHHHHHHCCCEEEEEecChh--h--------------HHHHHHcCCC-EEEeCCCc--h-
Q 020487 138 SPGESFLVHGGSSGIGTF--AIQMGKCQGVRVFVTAGSEE--K--------------LAVCKDLGAD-VCINYKTE--D- 195 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~--~~~~a~~~g~~v~~~~~~~~--~--------------~~~~~~~g~~-~~~~~~~~--~- 195 (325)
..+.++||+|+++.+|++ +++.+ ..|++++++....+ + .+.+++.|.. ..+..+.. .
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~ 117 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI 117 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence 446899999999999999 56666 88999888873221 1 1233455643 23333332 2
Q ss_pred ---HHHHHHHHhCCCcccEEEeCCChH
Q 020487 196 ---FVARVKEETGGKGVDVILDCMGAS 219 (325)
Q Consensus 196 ---~~~~~~~~~~~~~~d~vi~~~g~~ 219 (325)
..+.+.+..| ++|+++++++.+
T Consensus 118 v~~lie~I~e~~G--~IDiLVnSaA~~ 142 (398)
T PRK13656 118 KQKVIELIKQDLG--QVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHhcC--CCCEEEECCccC
Confidence 2333444443 699999998864
No 400
>PRK14103 trans-aconitate 2-methyltransferase; Provisional
Probab=95.58 E-value=0.14 Score=43.40 Aligned_cols=95 Identities=14% Similarity=0.153 Sum_probs=65.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
......++.+||=+|+ +.|..+..+++.. +.+|+.++.++...+.+++.+.+.+ ..+. .+......||+
T Consensus 23 ~~l~~~~~~~vLDlGc--G~G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~~~~~~~~-~~d~-------~~~~~~~~fD~ 92 (255)
T PRK14103 23 ARVGAERARRVVDLGC--GPGNLTRYLARRWPGAVIEALDSSPEMVAAARERGVDAR-TGDV-------RDWKPKPDTDV 92 (255)
T ss_pred HhCCCCCCCEEEEEcC--CCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHhcCCcEE-EcCh-------hhCCCCCCceE
Confidence 4456678899999997 3377777787775 6799999999888887776554332 2111 11222347999
Q ss_pred EEeCCCh-------HHHHHhhccccCCCEEEEE
Q 020487 212 ILDCMGA-------SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 212 vi~~~g~-------~~~~~~~~~l~~~g~~v~~ 237 (325)
|+....- ..+..+.+.|+|||+++..
T Consensus 93 v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~ 125 (255)
T PRK14103 93 VVSNAALQWVPEHADLLVRWVDELAPGSWIAVQ 125 (255)
T ss_pred EEEehhhhhCCCHHHHHHHHHHhCCCCcEEEEE
Confidence 9875531 2356778899999999865
No 401
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.58 E-value=0.079 Score=44.14 Aligned_cols=72 Identities=19% Similarity=0.286 Sum_probs=47.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGAD-VCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
.+.+++|+|+++.+|..++..+...|++|+++.++.... .... ..+..+..+..+.+.+..+ ++|+++.+.|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~--~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD-----LSGNFHFLQLDLSDDLEPLFDWVP--SVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc-----cCCcEEEEECChHHHHHHHHHhhC--CCCEEEECCC
Confidence 357899999999999999999988899999998765332 1111 1222222222233334333 6899999887
No 402
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=95.57 E-value=0.11 Score=43.81 Aligned_cols=77 Identities=25% Similarity=0.387 Sum_probs=47.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHHH-HcCCC-EEE--eCCCchH----HHHHHHHhCCCccc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVCK-DLGAD-VCI--NYKTEDF----VARVKEETGGKGVD 210 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~~-~~g~~-~~~--~~~~~~~----~~~~~~~~~~~~~d 210 (325)
+.+++|+|++|.+|..++..+...|++|+++.+ +..+.+.+. .++.. ..+ |..+... .+.+.+..+ .++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g-~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFG-KPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhC-CCCe
Confidence 568999999999999999999999999988764 333333332 33322 122 2222221 222222233 2489
Q ss_pred EEEeCCC
Q 020487 211 VILDCMG 217 (325)
Q Consensus 211 ~vi~~~g 217 (325)
+++.+.|
T Consensus 84 ~li~~ag 90 (253)
T PRK08642 84 TVVNNAL 90 (253)
T ss_pred EEEECCC
Confidence 9999875
No 403
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=95.57 E-value=0.16 Score=44.88 Aligned_cols=96 Identities=17% Similarity=0.056 Sum_probs=65.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEE-EeCC---C-chHHHHHHHHhCCCcccEEEeC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVC-INYK---T-EDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~-~~~~---~-~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.+|.|+|+ |.+|.+.+..+...|.+|++..+++++.+.+...+.+.. ++.. . ........+.. +..|+|+-|
T Consensus 5 m~I~iIG~-G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~~e~~--~~aD~Vi~~ 81 (328)
T PRK14618 5 MRVAVLGA-GAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADPEEAL--AGADFAVVA 81 (328)
T ss_pred CeEEEECc-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCHHHHH--cCCCEEEEE
Confidence 47999998 999999999998889999999998887776664321100 0000 0 00001112222 258999999
Q ss_pred CChHHHHHhhccccCCCEEEEEec
Q 020487 216 MGASYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 216 ~g~~~~~~~~~~l~~~g~~v~~g~ 239 (325)
+....+..+++.++++-.++++..
T Consensus 82 v~~~~~~~v~~~l~~~~~vi~~~~ 105 (328)
T PRK14618 82 VPSKALRETLAGLPRALGYVSCAK 105 (328)
T ss_pred CchHHHHHHHHhcCcCCEEEEEee
Confidence 998888888888888777776643
No 404
>PRK09134 short chain dehydrogenase; Provisional
Probab=95.56 E-value=0.11 Score=44.00 Aligned_cols=77 Identities=18% Similarity=0.256 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHHH----HHcCCCE-EE--eCCCchHHH----HHHHHhCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAVC----KDLGADV-CI--NYKTEDFVA----RVKEETGG 206 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~~----~~~g~~~-~~--~~~~~~~~~----~~~~~~~~ 206 (325)
.+.+++|+|++|.+|..+++.+...|++|+++.+. .++.+.+ +..+... .+ |..+..... .+.+..+
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~- 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG- 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC-
Confidence 35689999999999999999998999999887654 3333222 2223321 22 322222222 2222222
Q ss_pred CcccEEEeCCC
Q 020487 207 KGVDVILDCMG 217 (325)
Q Consensus 207 ~~~d~vi~~~g 217 (325)
++|++|.|.|
T Consensus 87 -~iD~vi~~ag 96 (258)
T PRK09134 87 -PITLLVNNAS 96 (258)
T ss_pred -CCCEEEECCc
Confidence 6899999987
No 405
>PRK07023 short chain dehydrogenase; Provisional
Probab=95.55 E-value=0.063 Score=45.05 Aligned_cols=35 Identities=26% Similarity=0.283 Sum_probs=31.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~ 176 (325)
+++|+|++|.+|..+++.+...|++|++++++..+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~ 37 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP 37 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch
Confidence 68999999999999999998899999999887553
No 406
>PRK14967 putative methyltransferase; Provisional
Probab=95.55 E-value=0.31 Score=40.48 Aligned_cols=94 Identities=17% Similarity=0.196 Sum_probs=60.9
Q ss_pred hcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHH----cCCC-EEEeCCCchHHHHHHHHhCCC
Q 020487 134 TSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKD----LGAD-VCINYKTEDFVARVKEETGGK 207 (325)
Q Consensus 134 ~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~----~g~~-~~~~~~~~~~~~~~~~~~~~~ 207 (325)
...+++++++|-.|+ |. |..+..+++. ++ +|++++.++...+.+++ .+.. .++..+ +.. .....
T Consensus 31 ~~~~~~~~~vLDlGc-G~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d---~~~----~~~~~ 100 (223)
T PRK14967 31 AEGLGPGRRVLDLCT-GS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGD---WAR----AVEFR 100 (223)
T ss_pred hcccCCCCeEEEecC-CH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECc---hhh----hccCC
Confidence 345678899999997 54 8888887765 66 99999999887765542 3332 222221 111 12234
Q ss_pred cccEEEeCCCh----------------------------HHHHHhhccccCCCEEEEE
Q 020487 208 GVDVILDCMGA----------------------------SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 208 ~~d~vi~~~g~----------------------------~~~~~~~~~l~~~g~~v~~ 237 (325)
.||+|+...+- ..+..+.+.|+++|+++.+
T Consensus 101 ~fD~Vi~npPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~ 158 (223)
T PRK14967 101 PFDVVVSNPPYVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLV 158 (223)
T ss_pred CeeEEEECCCCCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 79999875310 1134567889999999876
No 407
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=95.55 E-value=0.07 Score=47.46 Aligned_cols=35 Identities=14% Similarity=0.122 Sum_probs=31.4
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE 175 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~ 175 (325)
+++||+|++|.+|..+++.+...|.+|++++++..
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 37999999999999999999999999999987653
No 408
>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1.1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....
Probab=95.54 E-value=0.03 Score=43.27 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=57.9
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC-------C-CchHHHHHHHHhCCCcccEEEe
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-------K-TEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-------~-~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
|+|.|+ |++|...+..++..|.+|..+.+.+ +.+..++.|....... . ..... ......+|++|-
T Consensus 1 I~I~G~-GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~D~viv 73 (151)
T PF02558_consen 1 ILIIGA-GAIGSLYAARLAQAGHDVTLVSRSP-RLEAIKEQGLTITGPDGDETVQPPIVISAP-----SADAGPYDLVIV 73 (151)
T ss_dssp EEEEST-SHHHHHHHHHHHHTTCEEEEEESHH-HHHHHHHHCEEEEETTEEEEEEEEEEESSH-----GHHHSTESEEEE
T ss_pred CEEECc-CHHHHHHHHHHHHCCCceEEEEccc-cHHhhhheeEEEEecccceecccccccCcc-----hhccCCCcEEEE
Confidence 689998 9999999999988999999999888 7776765443211110 0 00001 011237999999
Q ss_pred CCChHHH----HHhhccccCCCEEEEEec
Q 020487 215 CMGASYF----QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 215 ~~g~~~~----~~~~~~l~~~g~~v~~g~ 239 (325)
|+-.... ..+...+.++..++++.+
T Consensus 74 ~vKa~~~~~~l~~l~~~~~~~t~iv~~qN 102 (151)
T PF02558_consen 74 AVKAYQLEQALQSLKPYLDPNTTIVSLQN 102 (151)
T ss_dssp -SSGGGHHHHHHHHCTGEETTEEEEEESS
T ss_pred EecccchHHHHHHHhhccCCCcEEEEEeC
Confidence 9876443 444455666767777643
No 409
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=95.54 E-value=0.017 Score=49.28 Aligned_cols=74 Identities=22% Similarity=0.267 Sum_probs=48.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHH----HHHHHhCCCcccEEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVA----RVKEETGGKGVDVIL 213 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~----~~~~~~~~~~~d~vi 213 (325)
.+.+++|+|++|.+|.++++.+...|++|++++++.++... ..... ..|-.+..... .+.+..+ .+|+++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~~---~~~~~~~~D~~~~~~~~~~~~~~~~~~g--~id~li 82 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQH---ENYQFVPTDVSSAEEVNHTVAEIIEKFG--RIDGLV 82 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcccccc---CceEEEEccCCCHHHHHHHHHHHHHHcC--CCCEEE
Confidence 36789999999999999999999999999999877654321 11111 12333322222 2222223 689999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
.+.|
T Consensus 83 ~~Ag 86 (266)
T PRK06171 83 NNAG 86 (266)
T ss_pred ECCc
Confidence 9887
No 410
>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family. Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.
Probab=95.53 E-value=0.11 Score=42.82 Aligned_cols=99 Identities=21% Similarity=0.139 Sum_probs=60.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCEEE---------eCCC-chHHHHHHHHh--
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADVCI---------NYKT-EDFVARVKEET-- 204 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~---------~~~~-~~~~~~~~~~~-- 204 (325)
.++.++|+.|+ +.|.-+..+|. .|.+|++++.++...+.+. +.+..... .... .....++.+..
T Consensus 33 ~~~~rvLd~GC--G~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~ 109 (213)
T TIGR03840 33 PAGARVFVPLC--GKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAA 109 (213)
T ss_pred CCCCeEEEeCC--CchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCcc
Confidence 56789999997 46888888875 5999999999999887753 22221000 0000 00011111111
Q ss_pred CCCcccEEEeCCCh---------HHHHHhhccccCCCEEEEEec
Q 020487 205 GGKGVDVILDCMGA---------SYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 205 ~~~~~d~vi~~~g~---------~~~~~~~~~l~~~g~~v~~g~ 239 (325)
....||.++|+..- ..+..+.+.|+|||+++..+.
T Consensus 110 ~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 110 DLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 12368999997541 235678899999998776654
No 411
>PLN02476 O-methyltransferase
Probab=95.53 E-value=0.18 Score=43.18 Aligned_cols=102 Identities=17% Similarity=0.159 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHh--
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEET-- 204 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~-- 204 (325)
...+..+..+||-+|. ..|..++.+++.+ +.+|+.++.+++..+.++ +.|...-+.-...+..+.+.+..
T Consensus 112 ~L~~~~~ak~VLEIGT--~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~GdA~e~L~~l~~~ 189 (278)
T PLN02476 112 MLVQILGAERCIEVGV--YTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHGLAAESLKSMIQN 189 (278)
T ss_pred HHHHhcCCCeEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhc
Confidence 3445567889999994 6788888888876 457999999988776654 45543222222223333333321
Q ss_pred -CCCcccEEEeCCChH----HHHHhhccccCCCEEEE
Q 020487 205 -GGKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 205 -~~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~ 236 (325)
....||.||--.... .+..+++.|++||.++.
T Consensus 190 ~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~ 226 (278)
T PLN02476 190 GEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVM 226 (278)
T ss_pred ccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 124799997665543 36777889999999875
No 412
>PRK08655 prephenate dehydrogenase; Provisional
Probab=95.53 E-value=0.087 Score=48.47 Aligned_cols=87 Identities=21% Similarity=0.323 Sum_probs=55.9
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH-HHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL-AVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (325)
+|+|+|+.|.+|.+++..++..|.+|++.++++++. +.+.++|... . . +. .+.. ..+|+|+-|+....
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~~gv~~-~---~-~~----~e~~--~~aDvVIlavp~~~ 70 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKELGVEY-A---N-DN----IDAA--KDADIVIISVPINV 70 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHcCCee-c---c-CH----HHHh--ccCCEEEEecCHHH
Confidence 688998779999999999999999999999887764 4445566421 1 0 11 1111 14677777777544
Q ss_pred H----HHhhccccCCCEEEEEec
Q 020487 221 F----QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 221 ~----~~~~~~l~~~g~~v~~g~ 239 (325)
. ..+...++++..+++++.
T Consensus 71 ~~~vl~~l~~~l~~~~iViDvsS 93 (437)
T PRK08655 71 TEDVIKEVAPHVKEGSLLMDVTS 93 (437)
T ss_pred HHHHHHHHHhhCCCCCEEEEccc
Confidence 3 233344555666666654
No 413
>PRK07041 short chain dehydrogenase; Provisional
Probab=95.53 E-value=0.13 Score=42.75 Aligned_cols=73 Identities=30% Similarity=0.358 Sum_probs=48.7
Q ss_pred EEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-Hc--CCC-EEE--eCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 144 LVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DL--GAD-VCI--NYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 144 li~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~--g~~-~~~--~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+|+|++|.+|..+++.+...|++|++++++.++.+... .+ +.. +++ |..+......+.+.. ..+|++|.+.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999999999999999999999876654432 22 222 222 333333333333333 26899999987
Q ss_pred h
Q 020487 218 A 218 (325)
Q Consensus 218 ~ 218 (325)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 3
No 414
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=95.53 E-value=0.14 Score=44.94 Aligned_cols=87 Identities=20% Similarity=0.169 Sum_probs=61.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC-
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG- 217 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g- 217 (325)
.|.++.|+|- |.+|.++++.++..|++|....++.. .+..+..++.++ + +.+... ..|++.-+++
T Consensus 145 ~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~~~~~~y~-~---------l~ell~--~sDii~l~~Pl 210 (324)
T COG1052 145 RGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEKELGARYV-D---------LDELLA--ESDIISLHCPL 210 (324)
T ss_pred CCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHhhcCceec-c---------HHHHHH--hCCEEEEeCCC
Confidence 3889999997 99999999999999999999998876 333334444433 1 122221 4688766555
Q ss_pred hHHH-----HHhhccccCCCEEEEEec
Q 020487 218 ASYF-----QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 218 ~~~~-----~~~~~~l~~~g~~v~~g~ 239 (325)
++.. ...+..|++++.+|-++.
T Consensus 211 t~~T~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 211 TPETRHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred ChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence 3332 455789999999998864
No 415
>PRK12744 short chain dehydrogenase; Provisional
Probab=95.52 E-value=0.096 Score=44.37 Aligned_cols=34 Identities=21% Similarity=0.367 Sum_probs=29.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEec
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG 172 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~ 172 (325)
.+.+++|+|++|.+|..+++.+...|++|+++++
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~ 40 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHY 40 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEec
Confidence 3678999999999999999999999999777754
No 416
>PRK07574 formate dehydrogenase; Provisional
Probab=95.52 E-value=0.097 Score=47.10 Aligned_cols=89 Identities=17% Similarity=0.101 Sum_probs=61.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|.|+|. |.+|..+++.++.+|++|++..++....+..+..+.... . .+.+... ..|+|+-++..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~~~g~~~~-----~----~l~ell~--~aDvV~l~lPl 258 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQELGLTYH-----V----SFDSLVS--VCDVVTIHCPL 258 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHhhcCceec-----C----CHHHHhh--cCCEEEEcCCC
Confidence 4678999998 999999999999999999999987644333334443211 1 1222222 57999888773
Q ss_pred -HH----H-HHhhccccCCCEEEEEec
Q 020487 219 -SY----F-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 -~~----~-~~~~~~l~~~g~~v~~g~ 239 (325)
+. + ...+..|+++..+|.++.
T Consensus 259 t~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 259 HPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 22 2 345778899888887754
No 417
>PRK12747 short chain dehydrogenase; Provisional
Probab=95.50 E-value=0.18 Score=42.48 Aligned_cols=104 Identities=23% Similarity=0.381 Sum_probs=62.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCch----HHHHHHH----
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTED----FVARVKE---- 202 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~----~~~~~~~---- 202 (325)
.+.+++|+|+++.+|.++++.+...|++|++.. ++.++.+.. +..+... .+ |..... ..+.+.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 367899999999999999999999999998875 444433222 2223221 11 222211 1222222
Q ss_pred HhCCCcccEEEeCCChH-----------HH---------------HHhhccccCCCEEEEEeccCC
Q 020487 203 ETGGKGVDVILDCMGAS-----------YF---------------QRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 203 ~~~~~~~d~vi~~~g~~-----------~~---------------~~~~~~l~~~g~~v~~g~~~~ 242 (325)
..+..++|+++++.|.. .+ ..+++.+...|++|.+++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12324689999988731 01 134455667799998876553
No 418
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=95.47 E-value=0.07 Score=46.37 Aligned_cols=75 Identities=20% Similarity=0.259 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhH---HHHHHcC-CC---EEE--eCCCchHHHHHHHHhCCCcc
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKL---AVCKDLG-AD---VCI--NYKTEDFVARVKEETGGKGV 209 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~---~~~~~~g-~~---~~~--~~~~~~~~~~~~~~~~~~~~ 209 (325)
.+..|+|+||+|-+|..++..+...|++|.+++|+.++. +.++++. +. .++ |..+.. .+.+.. .|+
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~l~~aDL~d~~---sf~~ai--~gc 79 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLKLFKADLLDEG---SFDKAI--DGC 79 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHHhcccCcccceEEeccccccc---hHHHHH--hCC
Confidence 578999999999999999999999999999999998874 3455554 22 122 222222 222223 269
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|.||-++..
T Consensus 80 dgVfH~Asp 88 (327)
T KOG1502|consen 80 DGVFHTASP 88 (327)
T ss_pred CEEEEeCcc
Confidence 999987653
No 419
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=95.47 E-value=0.068 Score=46.13 Aligned_cols=74 Identities=20% Similarity=0.085 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCC-EEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGAD-VCINYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
.+.+++|+|+ |+.+.+++..+..+|+ +|+++.|+.++.+.+. .++.. .+.... ...++.... ..+|+||+|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~~~~~--~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGGLAIE--KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhhhhcc--cCCCEEEEC
Confidence 4778999998 9999999999999998 7999999988776553 33321 111100 001111222 368999999
Q ss_pred CCh
Q 020487 216 MGA 218 (325)
Q Consensus 216 ~g~ 218 (325)
++.
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 874
No 420
>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.46 E-value=0.15 Score=43.61 Aligned_cols=95 Identities=17% Similarity=0.185 Sum_probs=66.1
Q ss_pred CcchHHHHHHHHHhhcCCC-CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHLS-PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~~-~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +.-++. .|.+++|+|.+..+|.-++.++...|++|++.-.... +
T Consensus 144 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~-------------------~--- 200 (287)
T PRK14176 144 VPCTPHGVIRAL-EEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTD-------------------D--- 200 (287)
T ss_pred CCCcHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCC-------------------C---
Confidence 444333333334 444443 6999999999888999999999999999987762211 1
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+.+ +.+|+++.++|.+.+- --+++++|..++.+|...
T Consensus 201 -l~~~~--~~ADIvv~AvG~p~~i-~~~~vk~gavVIDvGin~ 239 (287)
T PRK14176 201 -LKKYT--LDADILVVATGVKHLI-KADMVKEGAVIFDVGITK 239 (287)
T ss_pred -HHHHH--hhCCEEEEccCCcccc-CHHHcCCCcEEEEecccc
Confidence 12222 2689999999987643 346889999999998743
No 421
>PLN02686 cinnamoyl-CoA reductase
Probab=95.46 E-value=0.14 Score=46.12 Aligned_cols=44 Identities=18% Similarity=0.185 Sum_probs=37.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK 181 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~ 181 (325)
..+.+|||+|++|.+|..++..+...|++|+++.++.++.+.++
T Consensus 51 ~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 51 AEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 45789999999999999999999999999999888766554443
No 422
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=95.45 E-value=0.24 Score=41.73 Aligned_cols=100 Identities=11% Similarity=0.115 Sum_probs=66.0
Q ss_pred cCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhC---
Q 020487 135 SHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETG--- 205 (325)
Q Consensus 135 ~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~--- 205 (325)
.+..+..++|-+| +.+|++++.+|+.+ +.+|+.+..+++..+.++ +.|...-+........+.+.+...
T Consensus 75 ~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~L~~l~~~~~ 152 (247)
T PLN02589 75 LKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREGPALPVLDQMIEDGK 152 (247)
T ss_pred HHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeccHHHHHHHHHhccc
Confidence 3445567899999 57899999999877 569999999887766554 455332222223333444444332
Q ss_pred -CCcccEEEeCCChH----HHHHhhccccCCCEEEE
Q 020487 206 -GKGVDVILDCMGAS----YFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 206 -~~~~d~vi~~~g~~----~~~~~~~~l~~~g~~v~ 236 (325)
...||+||-=.... .+..+++.|++||.++.
T Consensus 153 ~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 153 YHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred cCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 24799997655442 36677889999998774
No 423
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=95.44 E-value=0.11 Score=46.26 Aligned_cols=74 Identities=14% Similarity=0.004 Sum_probs=46.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+|||+|++|-+|..+++.+... |.+|++++++..+.........-.++..+-......+.+... ++|+||.+++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~--~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRMHFFEGDITINKEWIEYHVK--KCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCeEEEeCCCCCCHHHHHHHHc--CCCEEEECcc
Confidence 6999999999999999988765 689999987655433222211112232222111223333333 5899998764
No 424
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=95.43 E-value=0.078 Score=43.37 Aligned_cols=89 Identities=16% Similarity=0.159 Sum_probs=56.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh-hHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE-KLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
|.+|+|.|+ |.+|..-++.+...|++|+++..... ....+.+.+.-..+.. . ..... . .++++||-+.+.
T Consensus 9 gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~~~~~i~~~~~-~-~~~~d----l--~~~~lVi~at~d 79 (205)
T TIGR01470 9 GRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLAEQGGITWLAR-C-FDADI----L--EGAFLVIAATDD 79 (205)
T ss_pred CCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHHHcCCEEEEeC-C-CCHHH----h--CCcEEEEECCCC
Confidence 679999998 99999999999999999999985543 2233333332112211 1 11112 1 368999999998
Q ss_pred HHH-HHhhccccCCCEEEEE
Q 020487 219 SYF-QRNLGSLNIDGRLFII 237 (325)
Q Consensus 219 ~~~-~~~~~~l~~~g~~v~~ 237 (325)
..+ ..+....+..|..|..
T Consensus 80 ~~ln~~i~~~a~~~~ilvn~ 99 (205)
T TIGR01470 80 EELNRRVAHAARARGVPVNV 99 (205)
T ss_pred HHHHHHHHHHHHHcCCEEEE
Confidence 754 3444444555666644
No 425
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=95.40 E-value=0.11 Score=44.52 Aligned_cols=76 Identities=16% Similarity=0.125 Sum_probs=46.5
Q ss_pred EEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-Hc----CCCEE--E---eCCCchHHHHHHHHhCCCcccE
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DL----GADVC--I---NYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~----g~~~~--~---~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
|||+||+|++|..+++.+...+. +++++++++.++-.++ ++ ....+ . ..-+-.-.+.+.......++|+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi 80 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI 80 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence 79999999999999988888886 8999999998876654 34 11111 1 1112222456666666668999
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
||.++.-
T Consensus 81 VfHaAA~ 87 (293)
T PF02719_consen 81 VFHAAAL 87 (293)
T ss_dssp EEE----
T ss_pred EEEChhc
Confidence 9998864
No 426
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.39 E-value=0.22 Score=43.04 Aligned_cols=94 Identities=15% Similarity=0.142 Sum_probs=64.8
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +.-++ -.|.+|.++|.++.+|..++.++...|++|++..+... +
T Consensus 139 ~PcTp~aii~lL-~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~-------------------~--- 195 (301)
T PRK14194 139 TPCTPSGCLRLL-EDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRST-------------------D--- 195 (301)
T ss_pred CCCcHHHHHHHH-HHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCC-------------------C---
Confidence 444433333334 33333 35899999999889999999999999999999864322 1
Q ss_pred HHHHHhCCCcccEEEeCCChHHH-HHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYF-QRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~-~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+.+ +..|+|+-++|.+.+ .. .++++|..+|.+|...
T Consensus 196 -l~e~~--~~ADIVIsavg~~~~v~~--~~ik~GaiVIDvgin~ 234 (301)
T PRK14194 196 -AKALC--RQADIVVAAVGRPRLIDA--DWLKPGAVVIDVGINR 234 (301)
T ss_pred -HHHHH--hcCCEEEEecCChhcccH--hhccCCcEEEEecccc
Confidence 12222 257999999998753 32 3489999999998543
No 427
>PRK05599 hypothetical protein; Provisional
Probab=95.37 E-value=0.099 Score=44.07 Aligned_cols=74 Identities=23% Similarity=0.281 Sum_probs=49.0
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC--EEE--eCCCchH----HHHHHHHhCCCcc
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD--VCI--NYKTEDF----VARVKEETGGKGV 209 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~--~~~--~~~~~~~----~~~~~~~~~~~~~ 209 (325)
+++|+|+++++|.+++..+. .|++|+++.+++++.+.+. +.+.. ..+ |-.+... .+.+.+..+ ++
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g--~i 78 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAG--EI 78 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcC--CC
Confidence 58999999999999998877 4999999999887765442 33432 222 3223222 223333333 68
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.+.|.
T Consensus 79 d~lv~nag~ 87 (246)
T PRK05599 79 SLAVVAFGI 87 (246)
T ss_pred CEEEEecCc
Confidence 999988874
No 428
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]
Probab=95.37 E-value=0.14 Score=42.22 Aligned_cols=94 Identities=21% Similarity=0.248 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE--EEeCCCchHHHHHHHHhCCCcccEEEe-
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV--CINYKTEDFVARVKEETGGKGVDVILD- 214 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~d~vi~- 214 (325)
-+|.+||=.|+.| |+.. +-+.++|++|+.++.+++..+.++...... -+++.... ..++.. .++.||+|+.
T Consensus 58 l~g~~vLDvGCGg--G~Ls-e~mAr~Ga~VtgiD~se~~I~~Ak~ha~e~gv~i~y~~~~-~edl~~--~~~~FDvV~cm 131 (243)
T COG2227 58 LPGLRVLDVGCGG--GILS-EPLARLGASVTGIDASEKPIEVAKLHALESGVNIDYRQAT-VEDLAS--AGGQFDVVTCM 131 (243)
T ss_pred CCCCeEEEecCCc--cHhh-HHHHHCCCeeEEecCChHHHHHHHHhhhhccccccchhhh-HHHHHh--cCCCccEEEEh
Confidence 3688899999855 4444 444556999999999999888877422211 12233222 222222 2258999974
Q ss_pred ----CCChHH--HHHhhccccCCCEEEEE
Q 020487 215 ----CMGASY--FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 215 ----~~g~~~--~~~~~~~l~~~g~~v~~ 237 (325)
.+..+. +....+.++|+|.++..
T Consensus 132 EVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 132 EVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 455443 46778889999988875
No 429
>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial. This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.
Probab=95.35 E-value=0.082 Score=49.22 Aligned_cols=77 Identities=16% Similarity=0.242 Sum_probs=53.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh---------------------hhHHHHHHcCCCEEEeCCCchHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE---------------------EKLAVCKDLGADVCINYKTEDFV 197 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~---------------------~~~~~~~~~g~~~~~~~~~~~~~ 197 (325)
.+++|+|+|+ |+.|+.++..++..|.+|+++...+ ...++++++|.+..++.......
T Consensus 140 ~~~~V~IIG~-GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 218 (467)
T TIGR01318 140 TGKRVAVIGA-GPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIFTAMGIEFHLNCEVGRDI 218 (467)
T ss_pred CCCeEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHHHHCCCEEECCCEeCCcc
Confidence 5789999998 9999999999999999999988654 23456677887655443221100
Q ss_pred HHHHHHhCCCcccEEEeCCChH
Q 020487 198 ARVKEETGGKGVDVILDCMGAS 219 (325)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~ 219 (325)
.+.+.. ..+|.+|.++|..
T Consensus 219 -~~~~~~--~~~D~vilAtGa~ 237 (467)
T TIGR01318 219 -SLDDLL--EDYDAVFLGVGTY 237 (467)
T ss_pred -CHHHHH--hcCCEEEEEeCCC
Confidence 111112 2699999999863
No 430
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=95.35 E-value=0.16 Score=43.69 Aligned_cols=92 Identities=17% Similarity=0.161 Sum_probs=59.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.+.+++|+|+ |.+|.+++..+...| .+|+++.|+.++.+.+. .++....+.. ... ..+.. ..+|+|++|+
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~~----~~~~~--~~~DivInaT 193 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DLE----LQEEL--ADFDLIINAT 193 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-ccc----chhcc--ccCCEEEECC
Confidence 4678999998 999999999999999 59999999988776554 3332110111 000 11111 3689999998
Q ss_pred ChHHH------HHhhccccCCCEEEEEe
Q 020487 217 GASYF------QRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 217 g~~~~------~~~~~~l~~~g~~v~~g 238 (325)
+.... ....++++++..++++-
T Consensus 194 p~g~~~~~~~~~~~~~~l~~~~~v~Div 221 (278)
T PRK00258 194 SAGMSGELPLPPLPLSLLRPGTIVYDMI 221 (278)
T ss_pred cCCCCCCCCCCCCCHHHcCCCCEEEEee
Confidence 74321 11235677777777763
No 431
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=95.33 E-value=0.26 Score=42.72 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=30.8
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEecCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVR-VFVTAGSE 174 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~-v~~~~~~~ 174 (325)
.+.+++|+|+ |++|.+++..+...|++ |+++.|+.
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~ 160 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKD 160 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCc
Confidence 4678999999 89999999988899995 99999885
No 432
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=95.32 E-value=0.073 Score=43.01 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=55.0
Q ss_pred CCCEEEEEcC-CchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCC-EEEeCCC-ch---HHHHHHHHhCCCcccE
Q 020487 139 PGESFLVHGG-SSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGAD-VCINYKT-ED---FVARVKEETGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~-~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~-~~---~~~~~~~~~~~~~~d~ 211 (325)
....|||+|+ +|++|.+++.-....|+.|+++.|.-++...+. +.|.. .=+|-.. ++ ....++.. ..+..|+
T Consensus 6 ~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~-~~Gkld~ 84 (289)
T KOG1209|consen 6 QPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRAN-PDGKLDL 84 (289)
T ss_pred CCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhC-CCCceEE
Confidence 4567899987 899999999988899999999999999887776 66642 1223222 22 22233332 3346899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
.++..|.
T Consensus 85 L~NNAG~ 91 (289)
T KOG1209|consen 85 LYNNAGQ 91 (289)
T ss_pred EEcCCCC
Confidence 9987764
No 433
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=95.32 E-value=0.19 Score=43.11 Aligned_cols=68 Identities=15% Similarity=0.219 Sum_probs=48.7
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
....+.+++|+|+ |+.+.+++..+...|+ +|+++.|+.++.+.+. .++... ...+ ....+|+++
T Consensus 118 ~~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~---------~~~~----~~~~~dlvI 183 (272)
T PRK12550 118 QVPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW---------RPDL----GGIEADILV 183 (272)
T ss_pred CCCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc---------hhhc----ccccCCEEE
Confidence 3445678999998 9999999999999998 6999999988776554 343110 0011 113589999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
+|+.
T Consensus 184 NaTp 187 (272)
T PRK12550 184 NVTP 187 (272)
T ss_pred ECCc
Confidence 9976
No 434
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=95.29 E-value=0.097 Score=51.03 Aligned_cols=78 Identities=10% Similarity=0.008 Sum_probs=48.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCM 216 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~ 216 (325)
.++.+|||+|++|-+|..+++.+... |.+|+++++.............-..+..+-.+....+.+... ++|+||.++
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~~l~~~l~--~~D~ViHlA 390 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSEWIEYHIK--KCDVVLPLV 390 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHHHHHHHhc--CCCEEEECc
Confidence 46788999999999999999988875 789999997664432221111112222222211122333332 689999877
Q ss_pred C
Q 020487 217 G 217 (325)
Q Consensus 217 g 217 (325)
+
T Consensus 391 a 391 (660)
T PRK08125 391 A 391 (660)
T ss_pred c
Confidence 5
No 435
>PLN03139 formate dehydrogenase; Provisional
Probab=95.26 E-value=0.12 Score=46.61 Aligned_cols=89 Identities=16% Similarity=0.141 Sum_probs=61.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|.|+|. |.+|..+++.++.+|++|++..++....+..++.|.... .+ +.+... ..|+|+.++..
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~~~g~~~~-----~~----l~ell~--~sDvV~l~lPl 265 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEKETGAKFE-----ED----LDAMLP--KCDVVVINTPL 265 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHhhcCceec-----CC----HHHHHh--hCCEEEEeCCC
Confidence 4779999997 999999999999999999998876544444444443221 11 222222 47888888773
Q ss_pred -HH----H-HHhhccccCCCEEEEEec
Q 020487 219 -SY----F-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 -~~----~-~~~~~~l~~~g~~v~~g~ 239 (325)
+. + ...+..|+++..+|.++.
T Consensus 266 t~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 266 TEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 22 2 355778899888887754
No 436
>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase. The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional
Probab=95.26 E-value=0.16 Score=40.68 Aligned_cols=97 Identities=12% Similarity=0.065 Sum_probs=64.5
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCC-C--chHHHHHHHHhCCCcccEEEe
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYK-T--EDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~~~~~~~~d~vi~ 214 (325)
-.|.+++|+|-+..+|.-++.++...|++|++...+.-.. ....+. ..+. . .+....+.+.+. .+|+++.
T Consensus 60 l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~~~~~~---~~hs~t~~~~~~~~l~~~~~--~ADIVIs 132 (197)
T cd01079 60 LYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--FTRGES---IRHEKHHVTDEEAMTLDCLS--QSDVVIT 132 (197)
T ss_pred CCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--cccccc---cccccccccchhhHHHHHhh--hCCEEEE
Confidence 3589999999999999999999999999999875332111 000010 0111 1 121112334432 6899999
Q ss_pred CCChHHHHHhhccccCCCEEEEEeccC
Q 020487 215 CMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 215 ~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
++|.+.+.---+++++|..+|.+|...
T Consensus 133 AvG~~~~~i~~d~ik~GavVIDVGi~~ 159 (197)
T cd01079 133 GVPSPNYKVPTELLKDGAICINFASIK 159 (197)
T ss_pred ccCCCCCccCHHHcCCCcEEEEcCCCc
Confidence 999887533357899999999998653
No 437
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=95.25 E-value=0.085 Score=46.32 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=33.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK 176 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~ 176 (325)
+.+|||+|++|.+|..++..+...|.+|++++++...
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 5789999999999999999999999999998877654
No 438
>PLN02427 UDP-apiose/xylose synthase
Probab=95.24 E-value=0.12 Score=46.82 Aligned_cols=76 Identities=9% Similarity=0.027 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChhhHHHHHHcCC------CEEEeCCCchHHHHHHHHhCCCcccE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVDV 211 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d~ 211 (325)
+..+|||+|++|-+|..+++.+... |.+|++++++.++...+...+. -..+..+-.+ ...+.+... ++|+
T Consensus 13 ~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~~~~~Dl~d-~~~l~~~~~--~~d~ 89 (386)
T PLN02427 13 KPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQFHRINIKH-DSRLEGLIK--MADL 89 (386)
T ss_pred cCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhccccccCCCCeEEEEcCCCC-hHHHHHHhh--cCCE
Confidence 3467999999999999999988877 5899999877665544433221 1222222222 223344443 5899
Q ss_pred EEeCCC
Q 020487 212 ILDCMG 217 (325)
Q Consensus 212 vi~~~g 217 (325)
||.+++
T Consensus 90 ViHlAa 95 (386)
T PLN02427 90 TINLAA 95 (386)
T ss_pred EEEccc
Confidence 999886
No 439
>PRK07069 short chain dehydrogenase; Validated
Probab=95.24 E-value=0.14 Score=43.06 Aligned_cols=37 Identities=24% Similarity=0.375 Sum_probs=31.8
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecC-hhhHHH
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS-EEKLAV 179 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~-~~~~~~ 179 (325)
++|+|++|.+|..+++.+...|++|+++.++ .++.+.
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~ 39 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDA 39 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHH
Confidence 7999999999999999998899999999987 444433
No 440
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=95.22 E-value=0.13 Score=43.01 Aligned_cols=75 Identities=32% Similarity=0.452 Sum_probs=47.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEec-ChhhHHHH-HH---cCCC-EEE--eCCCchHH----HHHHHHhCCCc
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAG-SEEKLAVC-KD---LGAD-VCI--NYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~---~g~~-~~~--~~~~~~~~----~~~~~~~~~~~ 208 (325)
.++||+|++|.+|..++..+...|++|+++.+ +.++.+.. .+ .+.. ..+ |..+.... +.+.+.. ..
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~--~~ 78 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAEL--GP 78 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHc--CC
Confidence 36899999999999999999999999999887 44433322 11 2221 122 33332222 2222223 26
Q ss_pred ccEEEeCCC
Q 020487 209 VDVILDCMG 217 (325)
Q Consensus 209 ~d~vi~~~g 217 (325)
+|.+|.+.|
T Consensus 79 id~vi~~ag 87 (242)
T TIGR01829 79 IDVLVNNAG 87 (242)
T ss_pred CcEEEECCC
Confidence 899999987
No 441
>TIGR00872 gnd_rel 6-phosphogluconate dehydrogenase (decarboxylating). This family resembles a larger family (gnd) of bacterial and eukaryotic 6-phosphogluconate dehydrogenases but differs from it by a deep split in a UPGMA similarity clustering tree and the lack of a central region of about 140 residues. Among complete genomes, it is found is found in Bacillus subtilis and Mycobacterium tuberculosis, both of which also contain gnd, and in Aquifex aeolicus. The protein from Methylobacillus flagellatus KT has been characterized as a decarboxylating 6-phosphogluconate dehydrogenase as part of an unusual formaldehyde oxidation cycle. In some sequenced organisms members of this family are the sole 6-phosphogluconate dehydrogenase present and are probably active in the pentose phosphate cycle.
Probab=95.22 E-value=0.41 Score=41.68 Aligned_cols=89 Identities=8% Similarity=0.031 Sum_probs=58.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHHH
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASYF 221 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~ 221 (325)
+|.++|. |.+|...+.-+...|.+|++..++.++.+.+.+.+.... .+ ..++.+.. ...|+|+-|+....+
T Consensus 2 ~Ig~IGl-G~mG~~la~~L~~~g~~V~~~dr~~~~~~~l~~~g~~~~-----~s-~~~~~~~~--~~~dvIi~~vp~~~~ 72 (298)
T TIGR00872 2 QLGLIGL-GRMGANIVRRLAKRGHDCVGYDHDQDAVKAMKEDRTTGV-----AN-LRELSQRL--SAPRVVWVMVPHGIV 72 (298)
T ss_pred EEEEEcc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCccc-----CC-HHHHHhhc--CCCCEEEEEcCchHH
Confidence 5889998 999999888888889999999999998888877654321 11 11222221 246888888776443
Q ss_pred H----HhhccccCCCEEEEEec
Q 020487 222 Q----RNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 222 ~----~~~~~l~~~g~~v~~g~ 239 (325)
. .+...++++-.++.++.
T Consensus 73 ~~v~~~l~~~l~~g~ivid~st 94 (298)
T TIGR00872 73 DAVLEELAPTLEKGDIVIDGGN 94 (298)
T ss_pred HHHHHHHHhhCCCCCEEEECCC
Confidence 3 33444555555555543
No 442
>PRK07201 short chain dehydrogenase; Provisional
Probab=95.21 E-value=0.093 Score=51.12 Aligned_cols=77 Identities=27% Similarity=0.371 Sum_probs=52.2
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCCE-EE--eCCCchHH----HHHHHHhCCCc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGADV-CI--NYKTEDFV----ARVKEETGGKG 208 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~~-~~--~~~~~~~~----~~~~~~~~~~~ 208 (325)
+.+++|+|++|.+|..++..+...|++|+++++++++.+.+. ..+... .+ |-.+.... +.+.+..+ .
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g--~ 448 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHG--H 448 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC--C
Confidence 578999999999999999999889999999999887765443 223221 22 32222211 22222233 5
Q ss_pred ccEEEeCCCh
Q 020487 209 VDVILDCMGA 218 (325)
Q Consensus 209 ~d~vi~~~g~ 218 (325)
+|+++.+.|.
T Consensus 449 id~li~~Ag~ 458 (657)
T PRK07201 449 VDYLVNNAGR 458 (657)
T ss_pred CCEEEECCCC
Confidence 8999999873
No 443
>PRK08317 hypothetical protein; Provisional
Probab=95.20 E-value=0.26 Score=41.03 Aligned_cols=99 Identities=19% Similarity=0.212 Sum_probs=65.8
Q ss_pred HhhcCCCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHHHc----CCC-EEEeCCCchHHHHHHHHh
Q 020487 132 FMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCKDL----GAD-VCINYKTEDFVARVKEET 204 (325)
Q Consensus 132 ~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~~~----g~~-~~~~~~~~~~~~~~~~~~ 204 (325)
.+...+.++++||-+|+ |. |..+..+++.. +.+++.++.++...+.+++. +.. .+...+..... .
T Consensus 12 ~~~~~~~~~~~vLdiG~-G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~------~ 83 (241)
T PRK08317 12 FELLAVQPGDRVLDVGC-GP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLP------F 83 (241)
T ss_pred HHHcCCCCCCEEEEeCC-CC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCC------C
Confidence 35667889999999998 43 88888888876 36999999998887777653 111 12211111100 1
Q ss_pred CCCcccEEEeCCC-----h--HHHHHhhccccCCCEEEEEe
Q 020487 205 GGKGVDVILDCMG-----A--SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 205 ~~~~~d~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g 238 (325)
....||+|+.... . ..+..+.+.|+++|.++...
T Consensus 84 ~~~~~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 84 PDGSFDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred CCCCceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 2246898876432 2 23678889999999998765
No 444
>PRK06940 short chain dehydrogenase; Provisional
Probab=95.19 E-value=0.13 Score=44.16 Aligned_cols=77 Identities=21% Similarity=0.268 Sum_probs=48.7
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH----HcCCC-EEE--eCCCchHHHHHHHHh-CCCcccE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK----DLGAD-VCI--NYKTEDFVARVKEET-GGKGVDV 211 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~----~~g~~-~~~--~~~~~~~~~~~~~~~-~~~~~d~ 211 (325)
+++++|+|+ |.+|..++..+. .|++|+++++++++.+.+. ..+.. ..+ |-.+......+.+.. ...++|+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357899998 799999999885 7999999999877654332 22322 122 333332222222221 1136899
Q ss_pred EEeCCCh
Q 020487 212 ILDCMGA 218 (325)
Q Consensus 212 vi~~~g~ 218 (325)
++++.|.
T Consensus 80 li~nAG~ 86 (275)
T PRK06940 80 LVHTAGV 86 (275)
T ss_pred EEECCCc
Confidence 9999874
No 445
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=95.18 E-value=0.069 Score=46.04 Aligned_cols=32 Identities=22% Similarity=0.276 Sum_probs=29.3
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
+|||+|++|.+|..+++.+...|.+|+++.++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~ 32 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS 32 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc
Confidence 48999999999999999999999999999875
No 446
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.18 E-value=0.27 Score=42.49 Aligned_cols=94 Identities=13% Similarity=0.151 Sum_probs=64.7
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHHHHcCCCEEEeCCCchHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVCKDLGADVCINYKTEDFV 197 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~ 197 (325)
+|+.....+..| +.-++ -.|.+|.|+|.++.+|..++..+...|+.|++.. ++..
T Consensus 138 ~PcTp~ai~~ll-~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~---------------------- 194 (296)
T PRK14188 138 VPCTPLGCMMLL-RRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRD---------------------- 194 (296)
T ss_pred cCCCHHHHHHHH-HHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCC----------------------
Confidence 444433344334 33333 3599999999889999999999999999999884 4321
Q ss_pred HHHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 198 ARVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+.+ +..|+|+-|+|.+.+-. -.++++|..++.+|...
T Consensus 195 --l~e~~--~~ADIVIsavg~~~~v~-~~~lk~GavVIDvGin~ 233 (296)
T PRK14188 195 --LPAVC--RRADILVAAVGRPEMVK-GDWIKPGATVIDVGINR 233 (296)
T ss_pred --HHHHH--hcCCEEEEecCChhhcc-hheecCCCEEEEcCCcc
Confidence 12222 15799999999876422 13489999999998654
No 447
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.17 E-value=0.16 Score=48.80 Aligned_cols=94 Identities=9% Similarity=0.041 Sum_probs=70.9
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (325)
+.++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|...++ .+..+ .++.+..+-..+|.++-+.+++.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v~~-GDat~--~~~L~~agi~~A~~vv~~~~d~~ 476 (601)
T PRK03659 401 PQVIIVGF-GRFGQVIGRLLMANKMRITVLERDISAVNLMRKYGYKVYY-GDATQ--LELLRAAGAEKAEAIVITCNEPE 476 (601)
T ss_pred CCEEEecC-chHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhCCCeEEE-eeCCC--HHHHHhcCCccCCEEEEEeCCHH
Confidence 57899998 9999999999999999999999999999999988765433 33322 24455566668999999998764
Q ss_pred H----HHhhccccCCCEEEEEe
Q 020487 221 F----QRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 221 ~----~~~~~~l~~~g~~v~~g 238 (325)
. ....+.+.|+-+++...
T Consensus 477 ~n~~i~~~~r~~~p~~~IiaRa 498 (601)
T PRK03659 477 DTMKIVELCQQHFPHLHILARA 498 (601)
T ss_pred HHHHHHHHHHHHCCCCeEEEEe
Confidence 3 23345667777887654
No 448
>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional
Probab=95.17 E-value=0.087 Score=44.99 Aligned_cols=101 Identities=15% Similarity=0.159 Sum_probs=66.0
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC--CEE--EeCCCchHHHHHHHHhCC
Q 020487 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA--DVC--INYKTEDFVARVKEETGG 206 (325)
Q Consensus 131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~--~~~--~~~~~~~~~~~~~~~~~~ 206 (325)
+.....+.++.+||=+|+ | .|..+..+++..+++|+.++.++...+.+++... +.+ ...+... .-...
T Consensus 44 ~l~~l~l~~~~~VLDiGc-G-~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~------~~~~~ 115 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGS-G-LGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILK------KDFPE 115 (263)
T ss_pred HHHhCCCCCCCEEEEEcC-C-CChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCccc------CCCCC
Confidence 345667899999999987 3 4666677777778999999999888777765321 111 1111110 01123
Q ss_pred CcccEEEeC-----CC--h--HHHHHhhccccCCCEEEEEec
Q 020487 207 KGVDVILDC-----MG--A--SYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 207 ~~~d~vi~~-----~g--~--~~~~~~~~~l~~~g~~v~~g~ 239 (325)
..||+|+.. .+ . ..+..+.+.|+|||+++....
T Consensus 116 ~~FD~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 116 NTFDMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred CCeEEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 469999862 12 1 235777899999999998754
No 449
>PRK13403 ketol-acid reductoisomerase; Provisional
Probab=95.14 E-value=0.24 Score=43.11 Aligned_cols=86 Identities=20% Similarity=0.199 Sum_probs=61.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|.|+|- |.+|.+.++.++..|.+|++..+.....+.+...|+. +. + +.+... ..|+|+-+++.
T Consensus 15 kgKtVGIIG~-GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A~~~G~~-v~-----s----l~Eaak--~ADVV~llLPd 81 (335)
T PRK13403 15 QGKTVAVIGY-GSQGHAQAQNLRDSGVEVVVGVRPGKSFEVAKADGFE-VM-----S----VSEAVR--TAQVVQMLLPD 81 (335)
T ss_pred CcCEEEEEeE-cHHHHHHHHHHHHCcCEEEEEECcchhhHHHHHcCCE-EC-----C----HHHHHh--cCCEEEEeCCC
Confidence 4789999998 9999999999999999999987665555556666653 21 1 222222 57999988875
Q ss_pred HH----H-HHhhccccCCCEEEEE
Q 020487 219 SY----F-QRNLGSLNIDGRLFII 237 (325)
Q Consensus 219 ~~----~-~~~~~~l~~~g~~v~~ 237 (325)
+. + ...+..|+++..++..
T Consensus 82 ~~t~~V~~~eil~~MK~GaiL~f~ 105 (335)
T PRK13403 82 EQQAHVYKAEVEENLREGQMLLFS 105 (335)
T ss_pred hHHHHHHHHHHHhcCCCCCEEEEC
Confidence 32 2 3456778888766544
No 450
>PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional
Probab=95.12 E-value=0.28 Score=43.88 Aligned_cols=95 Identities=16% Similarity=0.242 Sum_probs=62.7
Q ss_pred CEEEEEcCCchHHHHHHHHHHHC--CCEEEEEe--cChhhH-HHHHHcCCCEEEeCCCchHHHHHH--------------
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTA--GSEEKL-AVCKDLGADVCINYKTEDFVARVK-------------- 201 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~--~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~-------------- 201 (325)
.+|.|+|++|++|..++.+.+.. .++|++++ .+.++. +++++++...+.-.+... ...++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~~~-~~~l~~~l~~~~~~v~~G~ 80 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADEEA-AKELKEALAAAGIEVLAGE 80 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCHHH-HHHHHHhhccCCceEEECh
Confidence 47899999999999999998876 57888886 333333 445678877765444321 22222
Q ss_pred ----HHhCCCcccEEEeCCChH-HHHHhhccccCCCEEEE
Q 020487 202 ----EETGGKGVDVILDCMGAS-YFQRNLGSLNIDGRLFI 236 (325)
Q Consensus 202 ----~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~g~~v~ 236 (325)
+......+|+|+.++++. .+...+.+++.|-++.+
T Consensus 81 ~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaL 120 (385)
T PRK05447 81 EGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIAL 120 (385)
T ss_pred hHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEE
Confidence 223334689999987764 46667777777655554
No 451
>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=95.11 E-value=0.22 Score=42.51 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=65.7
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +.-++ -.|.+++|.|.+..+|.-++.++...|++|++.-... .+.
T Consensus 138 ~PcTp~av~~lL-~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T-------------------~~l-- 195 (278)
T PRK14172 138 LPCTPNSVITLI-KSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKT-------------------KNL-- 195 (278)
T ss_pred cCCCHHHHHHHH-HHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCC-------------------CCH--
Confidence 344333333333 33333 3589999999999999999999999999887775221 111
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+.+ +..|+++-++|.+.+- --+++++|..+|.+|...
T Consensus 196 --~~~~--~~ADIvIsAvGkp~~i-~~~~ik~gavVIDvGin~ 233 (278)
T PRK14172 196 --KEVC--KKADILVVAIGRPKFI-DEEYVKEGAIVIDVGTSS 233 (278)
T ss_pred --HHHH--hhCCEEEEcCCCcCcc-CHHHcCCCcEEEEeeccc
Confidence 2222 2589999999987752 246799999999998654
No 452
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=95.10 E-value=0.13 Score=42.88 Aligned_cols=74 Identities=28% Similarity=0.390 Sum_probs=46.4
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecCh-hhHH----HHHHcCCC-EEE--eCCCchHHHHH----HHHhCCCccc
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE-EKLA----VCKDLGAD-VCI--NYKTEDFVARV----KEETGGKGVD 210 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~-~~~~----~~~~~g~~-~~~--~~~~~~~~~~~----~~~~~~~~~d 210 (325)
++|+|++|.+|..+++.+...|++|+++.++. ++.+ .++..+.. ..+ |-.+......+ .+..+ ++|
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~--~id 78 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELG--PID 78 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhC--CCC
Confidence 57999999999999999998999999998764 2222 22334432 122 32232222222 22222 689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
.++.+.|.
T Consensus 79 ~vi~~ag~ 86 (239)
T TIGR01830 79 ILVNNAGI 86 (239)
T ss_pred EEEECCCC
Confidence 99998874
No 453
>PRK13243 glyoxylate reductase; Reviewed
Probab=95.08 E-value=0.12 Score=45.78 Aligned_cols=87 Identities=17% Similarity=0.177 Sum_probs=59.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.++.|+|. |.+|..+++.++..|++|++..++.... .....+... .+ +.+... ..|+|+-|+..
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~~~~~~~------~~----l~ell~--~aDiV~l~lP~ 214 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEKELGAEY------RP----LEELLR--ESDFVSLHVPL 214 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHHHcCCEe------cC----HHHHHh--hCCEEEEeCCC
Confidence 4789999998 9999999999999999999998765432 223333311 11 122222 46888888764
Q ss_pred HH-----H-HHhhccccCCCEEEEEec
Q 020487 219 SY-----F-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 ~~-----~-~~~~~~l~~~g~~v~~g~ 239 (325)
.. + ...+..|+++..+|.++.
T Consensus 215 t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 215 TKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred ChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 21 2 355678888888887754
No 454
>PLN00198 anthocyanidin reductase; Provisional
Probab=95.08 E-value=0.14 Score=45.46 Aligned_cols=75 Identities=17% Similarity=0.207 Sum_probs=48.5
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHH---HHc---CCCEEEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVC---KDL---GADVCINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~---~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
+.+|||+|++|-+|..++..+...|++|++++++....... ..+ +.-.++..+-.+ ...+.+... ++|.||
T Consensus 9 ~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d-~~~~~~~~~--~~d~vi 85 (338)
T PLN00198 9 KKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAHLRALQELGDLKIFGADLTD-EESFEAPIA--GCDLVF 85 (338)
T ss_pred CCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHhcCCCCceEEEEcCCCC-hHHHHHHHh--cCCEEE
Confidence 67899999999999999999999999998888765433221 111 111233222222 122333333 589999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
.+++
T Consensus 86 h~A~ 89 (338)
T PLN00198 86 HVAT 89 (338)
T ss_pred EeCC
Confidence 8886
No 455
>PLN02240 UDP-glucose 4-epimerase
Probab=95.07 E-value=0.15 Score=45.50 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=30.6
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
+.+++|+|++|.+|..+++.+...|.+|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 5789999999999999999998889999998754
No 456
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=95.05 E-value=0.16 Score=42.63 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=46.1
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHHH----HHcCCCE-EE--eCCCchHHHHH-HHHh-CCCccc
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAVC----KDLGADV-CI--NYKTEDFVARV-KEET-GGKGVD 210 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~~----~~~g~~~-~~--~~~~~~~~~~~-~~~~-~~~~~d 210 (325)
.+++|+|+++.+|..+++.+...|++|+++. ++.++.+.. +..+... .+ |..+......+ .+.. ....+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999999999999988765 444433322 2233222 22 22222212122 1111 112689
Q ss_pred EEEeCCC
Q 020487 211 VILDCMG 217 (325)
Q Consensus 211 ~vi~~~g 217 (325)
++|.++|
T Consensus 83 ~li~~ag 89 (248)
T PRK06947 83 ALVNNAG 89 (248)
T ss_pred EEEECCc
Confidence 9999887
No 457
>PRK14027 quinate/shikimate dehydrogenase; Provisional
Probab=95.04 E-value=0.3 Score=42.11 Aligned_cols=42 Identities=17% Similarity=0.185 Sum_probs=35.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK 181 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~ 181 (325)
.+.+++|+|+ |+.+.+++..+...|+ +++++.|+.++.+.+.
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La 168 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALA 168 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHH
Confidence 3678999998 9999999999988998 7999999988766553
No 458
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=95.03 E-value=0.092 Score=45.97 Aligned_cols=87 Identities=13% Similarity=0.092 Sum_probs=60.1
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.++.|+|- |.+|..+++.++..|++|++..++.++.. +..... . ...+.+... ..|+|+.+...
T Consensus 135 ~g~tvgIvG~-G~IG~~vA~~l~afG~~V~~~~~~~~~~~-----~~~~~~--~----~~~l~e~l~--~aDvvv~~lPl 200 (312)
T PRK15469 135 EDFTIGILGA-GVLGSKVAQSLQTWGFPLRCWSRSRKSWP-----GVQSFA--G----REELSAFLS--QTRVLINLLPN 200 (312)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCCCCCC-----Cceeec--c----cccHHHHHh--cCCEEEECCCC
Confidence 4789999998 99999999999999999999987643321 111111 1 112333333 57999988874
Q ss_pred H-H----H-HHhhccccCCCEEEEEec
Q 020487 219 S-Y----F-QRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 ~-~----~-~~~~~~l~~~g~~v~~g~ 239 (325)
. . + ...++.|+++..+|.+|.
T Consensus 201 t~~T~~li~~~~l~~mk~ga~lIN~aR 227 (312)
T PRK15469 201 TPETVGIINQQLLEQLPDGAYLLNLAR 227 (312)
T ss_pred CHHHHHHhHHHHHhcCCCCcEEEECCC
Confidence 2 2 2 345788999998888764
No 459
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.02 E-value=0.28 Score=47.35 Aligned_cols=93 Identities=11% Similarity=0.164 Sum_probs=69.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (325)
.+++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|... +..+..+ .++.+..+-..+|.++-+.+++.
T Consensus 401 ~~vII~G~-Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~~g~~v-~~GDat~--~~~L~~agi~~A~~vvv~~~d~~ 476 (621)
T PRK03562 401 PRVIIAGF-GRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRKFGMKV-FYGDATR--MDLLESAGAAKAEVLINAIDDPQ 476 (621)
T ss_pred CcEEEEec-ChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHhcCCeE-EEEeCCC--HHHHHhcCCCcCCEEEEEeCCHH
Confidence 57999998 99999999999999999999999999999998887654 3333322 23444456667899999988754
Q ss_pred H----HHhhccccCCCEEEEE
Q 020487 221 F----QRNLGSLNIDGRLFII 237 (325)
Q Consensus 221 ~----~~~~~~l~~~g~~v~~ 237 (325)
. ....+.+.|+-+++..
T Consensus 477 ~n~~i~~~ar~~~p~~~iiaR 497 (621)
T PRK03562 477 TSLQLVELVKEHFPHLQIIAR 497 (621)
T ss_pred HHHHHHHHHHHhCCCCeEEEE
Confidence 2 2334556677666654
No 460
>PRK07578 short chain dehydrogenase; Provisional
Probab=95.02 E-value=0.15 Score=41.28 Aligned_cols=64 Identities=23% Similarity=0.314 Sum_probs=43.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
+++|+|+++.+|..++..+... ++|+++.++.. ....|-.+......+.+..+ ++|+++.+.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~----------~~~~D~~~~~~~~~~~~~~~--~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG----------DVQVDITDPASIRALFEKVG--KVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC----------ceEecCCChHHHHHHHHhcC--CCCEEEECCCC
Confidence 6899999999999998888777 89999987643 12234333333333333333 58999888863
No 461
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=95.02 E-value=0.36 Score=41.73 Aligned_cols=90 Identities=14% Similarity=0.075 Sum_probs=56.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcC----CCEEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLG----ADVCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g----~~~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
.+.+++|+|+ |+.|.+++..+...|+ +|+++.++.++.+.+. .++ ...+.... .+.+.. ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~------~~~~~~--~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS------DLAAAL--AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc------chHhhh--CCCCEE
Confidence 4578999998 9999999999999998 8999999988776543 332 11222111 111112 258999
Q ss_pred EeCCChHH-----HHHhhccccCCCEEEEE
Q 020487 213 LDCMGASY-----FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 213 i~~~g~~~-----~~~~~~~l~~~g~~v~~ 237 (325)
|+|+.... .....+.++++..++++
T Consensus 197 InaTp~Gm~~~~~~~~~~~~l~~~~~v~Di 226 (284)
T PRK12549 197 VHATPTGMAKHPGLPLPAELLRPGLWVADI 226 (284)
T ss_pred EECCcCCCCCCCCCCCCHHHcCCCcEEEEe
Confidence 99954211 11112346666666655
No 462
>PLN00015 protochlorophyllide reductase
Probab=95.02 E-value=0.14 Score=44.86 Aligned_cols=74 Identities=20% Similarity=0.254 Sum_probs=47.9
Q ss_pred EEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHH-HcCC--CE----EEeCCCchHHHHHHH-HhC-CCcccEEE
Q 020487 144 LVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCK-DLGA--DV----CINYKTEDFVARVKE-ETG-GKGVDVIL 213 (325)
Q Consensus 144 li~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~-~~g~--~~----~~~~~~~~~~~~~~~-~~~-~~~~d~vi 213 (325)
+|+|+++++|..+++.+...| ++|++++++.++.+.+. +++. .. ..|-.+....+.+.+ ... ...+|++|
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999999998899 89999998887665443 3321 11 123333332222222 211 23689999
Q ss_pred eCCC
Q 020487 214 DCMG 217 (325)
Q Consensus 214 ~~~g 217 (325)
++.|
T Consensus 81 nnAG 84 (308)
T PLN00015 81 CNAA 84 (308)
T ss_pred ECCC
Confidence 9886
No 463
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=95.02 E-value=0.21 Score=42.65 Aligned_cols=33 Identities=21% Similarity=0.233 Sum_probs=29.5
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
.+++|+|+++.+|..+++.+...|++|+++.+.
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~ 34 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHR 34 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCC
Confidence 468999999999999999999999999988643
No 464
>PRK08309 short chain dehydrogenase; Provisional
Probab=94.99 E-value=1.2 Score=35.50 Aligned_cols=78 Identities=22% Similarity=0.181 Sum_probs=45.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCC--C-EE--EeCCCchH-HHHHHHHh-CCCcccEEE
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGA--D-VC--INYKTEDF-VARVKEET-GGKGVDVIL 213 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~--~-~~--~~~~~~~~-~~~~~~~~-~~~~~d~vi 213 (325)
+++|+|++| +|..+++.+...|++|++.+++.++.+.+.. ++. . .. .|..+... ...+.... ..+++|++|
T Consensus 2 ~vlVtGGtG-~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGTG-MLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcCH-HHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 589999975 5445666666789999999988777655432 321 1 12 24443222 22222221 123679999
Q ss_pred eCCChHH
Q 020487 214 DCMGASY 220 (325)
Q Consensus 214 ~~~g~~~ 220 (325)
+.+-...
T Consensus 81 ~~vh~~~ 87 (177)
T PRK08309 81 AWIHSSA 87 (177)
T ss_pred Eeccccc
Confidence 8775543
No 465
>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed
Probab=94.98 E-value=0.12 Score=50.10 Aligned_cols=76 Identities=20% Similarity=0.221 Sum_probs=54.0
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChh---------------------hHHHHHHcCCCEEEeCCCchHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEE---------------------KLAVCKDLGADVCINYKTEDFV 197 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~---------------------~~~~~~~~g~~~~~~~~~~~~~ 197 (325)
.+++|+|+|+ |..|+.++..++..|.+|+++.+.+. +.++++++|.+..++.......
T Consensus 309 ~~kkVaIIG~-GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~~~~Gv~~~~~~~v~~~~ 387 (639)
T PRK12809 309 RSEKVAVIGA-GPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIFTAMGIDFHLNCEIGRDI 387 (639)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHHHHCCeEEEcCCccCCcC
Confidence 4899999998 99999999999999999999986652 3456667887665544321100
Q ss_pred HHHHHHhCCCcccEEEeCCCh
Q 020487 198 ARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 198 ~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.+.+.. ..||.+|.++|.
T Consensus 388 -~~~~l~--~~~DaV~latGa 405 (639)
T PRK12809 388 -TFSDLT--SEYDAVFIGVGT 405 (639)
T ss_pred -CHHHHH--hcCCEEEEeCCC
Confidence 111222 268999998885
No 466
>KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism]
Probab=94.96 E-value=0.22 Score=43.17 Aligned_cols=58 Identities=26% Similarity=0.387 Sum_probs=49.4
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe---cChhhHHHHHHcCCCEEEe
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA---GSEEKLAVCKDLGADVCIN 190 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~---~~~~~~~~~~~~g~~~~~~ 190 (325)
....+.||.++||-.-+|..|..++.++...|++++++. .+.+++..++.+|+..+..
T Consensus 96 ~~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~a~Gaeii~t 156 (362)
T KOG1252|consen 96 KKGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLRALGAEIILT 156 (362)
T ss_pred HcCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHHHcCCEEEec
Confidence 556789999999999999999999999999999999987 4455777888999876653
No 467
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.95 E-value=0.28 Score=41.56 Aligned_cols=33 Identities=27% Similarity=0.311 Sum_probs=29.2
Q ss_pred CCCEEEEEcCC--chHHHHHHHHHHHCCCEEEEEe
Q 020487 139 PGESFLVHGGS--SGIGTFAIQMGKCQGVRVFVTA 171 (325)
Q Consensus 139 ~~~~vli~g~~--g~~G~~~~~~a~~~g~~v~~~~ 171 (325)
+|.+++|+|++ +++|..++..+...|++|++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 47899999997 4899999999999999999875
No 468
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]
Probab=94.93 E-value=0.37 Score=40.23 Aligned_cols=104 Identities=20% Similarity=0.275 Sum_probs=71.3
Q ss_pred HHhhcCCCCCCEEEEEcCCchHHHHHHHHHHHCC-CEEEEEecChhhHHHHHH----cCCCE--EEeCCCchHHHHHHHH
Q 020487 131 VFMTSHLSPGESFLVHGGSSGIGTFAIQMGKCQG-VRVFVTAGSEEKLAVCKD----LGADV--CINYKTEDFVARVKEE 203 (325)
Q Consensus 131 l~~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g-~~v~~~~~~~~~~~~~~~----~g~~~--~~~~~~~~~~~~~~~~ 203 (325)
+.......+|++||=.++ +.|-.+..+++..| .+|++++-++.-++.+++ .+... .+..+... +-
T Consensus 43 ~i~~~~~~~g~~vLDva~--GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~----LP-- 114 (238)
T COG2226 43 LISLLGIKPGDKVLDVAC--GTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAEN----LP-- 114 (238)
T ss_pred HHHhhCCCCCCEEEEecC--CccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhh----CC--
Confidence 334555668999998875 56888888888886 499999999998877764 22221 12222211 11
Q ss_pred hCCCcccEEEeCCCh-------HHHHHhhccccCCCEEEEEeccCC
Q 020487 204 TGGKGVDVILDCMGA-------SYFQRNLGSLNIDGRLFIIGTQGG 242 (325)
Q Consensus 204 ~~~~~~d~vi~~~g~-------~~~~~~~~~l~~~g~~v~~g~~~~ 242 (325)
..++.||++..+.|- ..+.++.+.|+|||+++.+-....
T Consensus 115 f~D~sFD~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~p 160 (238)
T COG2226 115 FPDNSFDAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSKP 160 (238)
T ss_pred CCCCccCEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCCC
Confidence 334578998877663 347888999999999998865543
No 469
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.92 E-value=0.22 Score=38.81 Aligned_cols=81 Identities=27% Similarity=0.386 Sum_probs=57.4
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhh-HHHHHHcCCCEEEeCCC----chHHHHHHHHh-CCCcccEE
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEK-LAVCKDLGADVCINYKT----EDFVARVKEET-GGKGVDVI 212 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~-~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-~~~~~d~v 212 (325)
+|-..+|+|+.+++|.+++..+...|+.|+..+....+ .+.++++|...++...+ ++....+...- .-...|..
T Consensus 8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~ 87 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL 87 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence 46667999999999999999999999999999866654 45677899877764433 22222222211 11258999
Q ss_pred EeCCChH
Q 020487 213 LDCMGAS 219 (325)
Q Consensus 213 i~~~g~~ 219 (325)
++|.|..
T Consensus 88 vncagia 94 (260)
T KOG1199|consen 88 VNCAGIA 94 (260)
T ss_pred eecccee
Confidence 9999864
No 470
>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]
Probab=94.91 E-value=0.14 Score=42.69 Aligned_cols=101 Identities=18% Similarity=0.275 Sum_probs=69.8
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCC--EEEEEecChhhHHHHH----HcCCCEEEeCCCchHHHHHHHHhCC
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGV--RVFVTAGSEEKLAVCK----DLGADVCINYKTEDFVARVKEETGG 206 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~--~v~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~ 206 (325)
.+.++.||++|+=.|. +.|.+++.+|+..|. +|+.....++..+.++ +++....+.... .++.+....
T Consensus 88 ~~~gi~pg~rVlEAGt--GSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~----~Dv~~~~~~ 161 (256)
T COG2519 88 ARLGISPGSRVLEAGT--GSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKL----GDVREGIDE 161 (256)
T ss_pred HHcCCCCCCEEEEccc--CchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEe----ccccccccc
Confidence 5678899999988774 468888999988864 8999998877665544 345433222112 233443334
Q ss_pred CcccEEEeCCCh--HHHHHhhccccCCCEEEEEec
Q 020487 207 KGVDVILDCMGA--SYFQRNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 207 ~~~d~vi~~~g~--~~~~~~~~~l~~~g~~v~~g~ 239 (325)
..+|.+|==... ..++.+.+.|++||.++.+..
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P 196 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSP 196 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcC
Confidence 478887655544 457899999999999998854
No 471
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=94.90 E-value=0.19 Score=42.45 Aligned_cols=34 Identities=32% Similarity=0.411 Sum_probs=30.0
Q ss_pred CCEEEEEcCCc--hHHHHHHHHHHHCCCEEEEEecC
Q 020487 140 GESFLVHGGSS--GIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 140 ~~~vli~g~~g--~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
+.+++|+|+++ .+|..++..+...|++|++++++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 57899999974 79999998888889999999876
No 472
>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.90 E-value=0.34 Score=41.56 Aligned_cols=95 Identities=16% Similarity=0.194 Sum_probs=65.5
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +..++ -.|.++.|.|.+..+|.-++.++.+.|++|++.-.. ..
T Consensus 138 ~PcTp~av~~lL-~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~-------------------t~---- 193 (284)
T PRK14190 138 LPCTPHGILELL-KEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSK-------------------TK---- 193 (284)
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCC-------------------ch----
Confidence 344333333333 43343 368999999999999999999999999999976421 11
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+.+.+ +..|+++-++|.+.+ ---+++++|..++++|...
T Consensus 194 ~l~~~~--~~ADIvI~AvG~p~~-i~~~~ik~gavVIDvGi~~ 233 (284)
T PRK14190 194 NLAELT--KQADILIVAVGKPKL-ITADMVKEGAVVIDVGVNR 233 (284)
T ss_pred hHHHHH--HhCCEEEEecCCCCc-CCHHHcCCCCEEEEeeccc
Confidence 122222 258999999998764 2246789999999998764
No 473
>PLN00203 glutamyl-tRNA reductase
Probab=94.86 E-value=0.24 Score=46.50 Aligned_cols=73 Identities=18% Similarity=0.282 Sum_probs=51.0
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHH-HcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCK-DLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+.+|+|+|+ |.+|.+++..+...|+ +|+++.++.++.+.+. .++...+.... .+.+.+... .+|+||.|++
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~i~~~~----~~dl~~al~--~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVEIIYKP----LDEMLACAA--EADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCceEeec----HhhHHHHHh--cCCEEEEccC
Confidence 678999998 9999999999999997 7999999988876665 34321111000 112223332 6899999987
Q ss_pred hH
Q 020487 218 AS 219 (325)
Q Consensus 218 ~~ 219 (325)
..
T Consensus 339 s~ 340 (519)
T PLN00203 339 SE 340 (519)
T ss_pred CC
Confidence 53
No 474
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=94.85 E-value=0.087 Score=46.29 Aligned_cols=72 Identities=17% Similarity=0.258 Sum_probs=48.7
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
+++|+|++|.+|..+++.+...|++|+++.++.++.......+... +..+-.+ .+.+.+... ++|+||.+.+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~D~~~-~~~l~~~~~--~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLEGLDVEI-VEGDLRD-PASLRKAVA--GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccccCCceE-EEeeCCC-HHHHHHHHh--CCCEEEEece
Confidence 6899999999999999999999999999998766543333333332 2222222 223444433 5799998875
No 475
>PLN02650 dihydroflavonol-4-reductase
Probab=94.85 E-value=0.16 Score=45.33 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHH
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLA 178 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~ 178 (325)
...+|||+|++|-+|..++..+...|.+|++++++.....
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~ 43 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVK 43 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhH
Confidence 3568999999999999999999999999999887765443
No 476
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=94.84 E-value=0.097 Score=45.16 Aligned_cols=92 Identities=13% Similarity=0.196 Sum_probs=57.2
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCE-EEeCCCchHHHHHHHHh----CCCc-ccEEEeC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADV-CINYKTEDFVARVKEET----GGKG-VDVILDC 215 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~----~~~~-~d~vi~~ 215 (325)
+|+|+|++|.+|..+++.+...|.+|.+++|+.++.. ..+... ..|..+.. .+.+.. +-.+ +|.++-+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~---~~~~~~~~~d~~d~~---~l~~a~~~~~~~~g~~d~v~~~ 74 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA---GPNEKHVKFDWLDED---TWDNPFSSDDGMEPEISAVYLV 74 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc---CCCCccccccCCCHH---HHHHHHhcccCcCCceeEEEEe
Confidence 4899999999999999999989999999999876542 122221 22333332 223322 1135 8888877
Q ss_pred CCh-----HHHHHhhccccCCC--EEEEEec
Q 020487 216 MGA-----SYFQRNLGSLNIDG--RLFIIGT 239 (325)
Q Consensus 216 ~g~-----~~~~~~~~~l~~~g--~~v~~g~ 239 (325)
.+. .....+++..+..| ++|.++.
T Consensus 75 ~~~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 75 APPIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 653 12334444444333 6777654
No 477
>PRK06123 short chain dehydrogenase; Provisional
Probab=94.83 E-value=0.23 Score=41.72 Aligned_cols=79 Identities=14% Similarity=0.275 Sum_probs=46.9
Q ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEe-cChhhHHH----HHHcCCCE-EE--eCCCch-HHHHHHHHh-CCCcc
Q 020487 140 GESFLVHGGSSGIGTFAIQMGKCQGVRVFVTA-GSEEKLAV----CKDLGADV-CI--NYKTED-FVARVKEET-GGKGV 209 (325)
Q Consensus 140 ~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~-~~~~~~~~----~~~~g~~~-~~--~~~~~~-~~~~~~~~~-~~~~~ 209 (325)
+.+++|+|++|.+|..+++.+...|++|+... +++++... ++..+... .+ |-.+.. ....+.+.. ....+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 45799999999999999999988999988775 33333322 22334322 22 322222 222222111 11268
Q ss_pred cEEEeCCCh
Q 020487 210 DVILDCMGA 218 (325)
Q Consensus 210 d~vi~~~g~ 218 (325)
|+++.+.|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998874
No 478
>PLN02583 cinnamoyl-CoA reductase
Probab=94.80 E-value=0.29 Score=42.54 Aligned_cols=37 Identities=16% Similarity=0.196 Sum_probs=32.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecCh
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSE 174 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~ 174 (325)
+++.+++|+|++|.+|..++..+...|++|+++.++.
T Consensus 4 ~~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~ 40 (297)
T PLN02583 4 ESSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKN 40 (297)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCc
Confidence 3567899999999999999999999999999998753
No 479
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.79 E-value=0.31 Score=41.71 Aligned_cols=77 Identities=17% Similarity=0.268 Sum_probs=58.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+++|.|.+..+|.-+++++...|++|++.-.. +.+. .+.+ +.+|+++-++|.
T Consensus 155 ~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~-------------------T~~l----~~~~--~~ADIvI~AvG~ 209 (282)
T PRK14169 155 AGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSK-------------------TRNL----KQLT--KEADILVVAVGV 209 (282)
T ss_pred CCCEEEEECCCccchHHHHHHHHHCCCEEEEECCC-------------------CCCH----HHHH--hhCCEEEEccCC
Confidence 58999999999999999999999999999876422 1111 2222 257999999998
Q ss_pred HHHHHhhccccCCCEEEEEeccC
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+- --+++++|..++.+|...
T Consensus 210 p~~i-~~~~vk~GavVIDvGin~ 231 (282)
T PRK14169 210 PHFI-GADAVKPGAVVIDVGISR 231 (282)
T ss_pred cCcc-CHHHcCCCcEEEEeeccc
Confidence 7752 246899999999998754
No 480
>PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate. This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A ....
Probab=94.77 E-value=0.072 Score=41.56 Aligned_cols=85 Identities=15% Similarity=0.162 Sum_probs=53.8
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCC------CEEEeCCCchHHHHHHHHhCCCcccEEEeC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGA------DVCINYKTEDFVARVKEETGGKGVDVILDC 215 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~------~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~ 215 (325)
+|.|+|+ |.+|.+++..+...|.+|+...++++..+.+++-+. +..+..+- ....++.+.. ++.|+++-+
T Consensus 1 KI~ViGa-G~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~~~~~~~~l~~~i-~~t~dl~~a~--~~ad~Iiia 76 (157)
T PF01210_consen 1 KIAVIGA-GNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNPKYLPGIKLPENI-KATTDLEEAL--EDADIIIIA 76 (157)
T ss_dssp EEEEESS-SHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSETTTSTTSBEETTE-EEESSHHHHH--TT-SEEEE-
T ss_pred CEEEECc-CHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCCCCCCCcccCccc-ccccCHHHHh--CcccEEEec
Confidence 5889998 999999999999999999999999988777764221 11111110 0111223333 267999999
Q ss_pred CChHHHHHhhccccC
Q 020487 216 MGASYFQRNLGSLNI 230 (325)
Q Consensus 216 ~g~~~~~~~~~~l~~ 230 (325)
+........++.+++
T Consensus 77 vPs~~~~~~~~~l~~ 91 (157)
T PF01210_consen 77 VPSQAHREVLEQLAP 91 (157)
T ss_dssp S-GGGHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHhh
Confidence 998665555544444
No 481
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=94.74 E-value=0.096 Score=44.04 Aligned_cols=43 Identities=33% Similarity=0.390 Sum_probs=37.2
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHH
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAV 179 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 179 (325)
..++.+++|+|++|.+|..+++.+...|++|++++++.++.+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~ 51 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEA 51 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHH
Confidence 4578899999999999999999998899999999988765433
No 482
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=94.73 E-value=0.14 Score=46.09 Aligned_cols=76 Identities=12% Similarity=0.055 Sum_probs=47.9
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMG 217 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g 217 (325)
..+.+|||+|++|-+|..++..+...|.+|+++++..........++. ..+..+..+ ...+..... ++|+||.+++
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~-~~~~~Dl~d-~~~~~~~~~--~~D~Vih~Aa 94 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCH-EFHLVDLRV-MENCLKVTK--GVDHVFNLAA 94 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccc-eEEECCCCC-HHHHHHHHh--CCCEEEEccc
Confidence 467899999999999999999999999999999875322110001111 222222222 122333332 5899999874
No 483
>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.73 E-value=0.3 Score=41.81 Aligned_cols=95 Identities=15% Similarity=0.143 Sum_probs=65.6
Q ss_pred CcchHHHHHHHHHhhcCC-CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHH
Q 020487 120 FPEVACTVWSTVFMTSHL-SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVA 198 (325)
Q Consensus 120 l~~~~~~a~~~l~~~~~~-~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 198 (325)
+|+........| +.-++ -.|.+++|.|.+..+|.-++.++...|++|++.-.... +.
T Consensus 138 ~PcTp~aii~lL-~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~-------------------dl-- 195 (282)
T PRK14180 138 ESCTPKGIMTML-REYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT-------------------DL-- 195 (282)
T ss_pred CCCCHHHHHHHH-HHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCC-------------------CH--
Confidence 444333334334 33233 35899999999999999999999999999977652211 11
Q ss_pred HHHHHhCCCcccEEEeCCChHHHHHhhccccCCCEEEEEeccC
Q 020487 199 RVKEETGGKGVDVILDCMGASYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 199 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
.+.+ +..|+++-++|.+.+-. -+++++|..++.+|...
T Consensus 196 --~~~~--k~ADIvIsAvGkp~~i~-~~~vk~gavVIDvGin~ 233 (282)
T PRK14180 196 --KSHT--TKADILIVAVGKPNFIT-ADMVKEGAVVIDVGINH 233 (282)
T ss_pred --HHHh--hhcCEEEEccCCcCcCC-HHHcCCCcEEEEecccc
Confidence 1122 25899999999877522 37889999999998653
No 484
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=94.72 E-value=0.36 Score=46.07 Aligned_cols=93 Identities=11% Similarity=0.109 Sum_probs=66.0
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCChHH
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGASY 220 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (325)
+.++|.|. |.+|..+++.++..|.++++++.++++.+.+++.|...+. .+..+ .+..+..+-+.+|.++-+.+++.
T Consensus 418 ~hiiI~G~-G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~~g~~~i~-GD~~~--~~~L~~a~i~~a~~viv~~~~~~ 493 (558)
T PRK10669 418 NHALLVGY-GRVGSLLGEKLLAAGIPLVVIETSRTRVDELRERGIRAVL-GNAAN--EEIMQLAHLDCARWLLLTIPNGY 493 (558)
T ss_pred CCEEEECC-ChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCeEEE-cCCCC--HHHHHhcCccccCEEEEEcCChH
Confidence 57899998 9999999999999999999999999999999888765443 33322 23344455557898887766532
Q ss_pred ----HHHhhccccCCCEEEEE
Q 020487 221 ----FQRNLGSLNIDGRLFII 237 (325)
Q Consensus 221 ----~~~~~~~l~~~g~~v~~ 237 (325)
+-...+...++-+++..
T Consensus 494 ~~~~iv~~~~~~~~~~~iiar 514 (558)
T PRK10669 494 EAGEIVASAREKRPDIEIIAR 514 (558)
T ss_pred HHHHHHHHHHHHCCCCeEEEE
Confidence 22233445566666665
No 485
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=94.72 E-value=0.21 Score=41.77 Aligned_cols=78 Identities=19% Similarity=0.255 Sum_probs=47.8
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEE-ecChhhHHHH----HHcCCC-EEE--eCCCchHHHHH-HHHh-CCCccc
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVT-AGSEEKLAVC----KDLGAD-VCI--NYKTEDFVARV-KEET-GGKGVD 210 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~-~~~~~~~~~~----~~~g~~-~~~--~~~~~~~~~~~-~~~~-~~~~~d 210 (325)
.+++|+|++|.+|..++..+...|++|+++ .++.++.+.. +..+.. ..+ |-.+......+ .+.. ...++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 368999999999999999999999999875 4555443322 223322 222 33332222222 2221 123689
Q ss_pred EEEeCCCh
Q 020487 211 VILDCMGA 218 (325)
Q Consensus 211 ~vi~~~g~ 218 (325)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999874
No 486
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=94.72 E-value=0.049 Score=44.48 Aligned_cols=99 Identities=15% Similarity=0.203 Sum_probs=63.9
Q ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHC--CCEEEEEecChhhHHHHH----HcCCC---EEEeCCCchHHHHHHHHhCCC
Q 020487 137 LSPGESFLVHGGSSGIGTFAIQMGKCQ--GVRVFVTAGSEEKLAVCK----DLGAD---VCINYKTEDFVARVKEETGGK 207 (325)
Q Consensus 137 ~~~~~~vli~g~~g~~G~~~~~~a~~~--g~~v~~~~~~~~~~~~~~----~~g~~---~~~~~~~~~~~~~~~~~~~~~ 207 (325)
.....+||-+| +.+|++++.+|+.+ +.+|+.+..+++..+.++ ..|.. .++..+.......+.+.....
T Consensus 43 ~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~gda~~~l~~l~~~~~~~ 120 (205)
T PF01596_consen 43 LTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEGDALEVLPELANDGEEG 120 (205)
T ss_dssp HHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES-HHHHHHHHHHTTTTT
T ss_pred hcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEeccHhhHHHHHhccCCC
Confidence 35567899999 46799999999887 579999999998776664 34532 233333322223332222223
Q ss_pred cccEEEeCCC-h---HHHHHhhccccCCCEEEEE
Q 020487 208 GVDVILDCMG-A---SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 208 ~~d~vi~~~g-~---~~~~~~~~~l~~~g~~v~~ 237 (325)
.||+||-=.. . ..+..+++.|++||.++.=
T Consensus 121 ~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~D 154 (205)
T PF01596_consen 121 QFDFVFIDADKRNYLEYFEKALPLLRPGGVIIAD 154 (205)
T ss_dssp SEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEEcccccchhhHHHHHhhhccCCeEEEEc
Confidence 6999974333 3 2366778899999988863
No 487
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=94.71 E-value=0.035 Score=47.90 Aligned_cols=67 Identities=24% Similarity=0.235 Sum_probs=45.1
Q ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 143 FLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 143 vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
|||+|++|-+|..+++.+...|++|++++++..........+ +.+.... ...+.. .++|+|+.|++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---~~~~~~~----~~~~~~--~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTKWEG---YKPWAPL----AESEAL--EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccccee---eeccccc----chhhhc--CCCCEEEECCCC
Confidence 589999999999999999889999999998876543222111 1111111 112222 368999999873
No 488
>PRK07340 ornithine cyclodeaminase; Validated
Probab=94.71 E-value=0.36 Score=42.14 Aligned_cols=101 Identities=15% Similarity=0.100 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHH-CCC-EEEEEecChhhHHHHH-HcCCC--EEEeCCCchHHHHHHHHhCCCcccEE
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKC-QGV-RVFVTAGSEEKLAVCK-DLGAD--VCINYKTEDFVARVKEETGGKGVDVI 212 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~-~g~-~v~~~~~~~~~~~~~~-~~g~~--~~~~~~~~~~~~~~~~~~~~~~~d~v 212 (325)
....+++|+|+ |..|.+.+..+.. .+. +|.+..++.++.+.+. ++... .+. ..+. .+.. ..+|+|
T Consensus 123 ~~~~~v~IiGa-G~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~---~~~~----~~av--~~aDiV 192 (304)
T PRK07340 123 APPGDLLLIGT-GVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE---PLDG----EAIP--EAVDLV 192 (304)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE---ECCH----HHHh--hcCCEE
Confidence 45678999998 9999888888764 565 7999999888765543 33211 111 1111 2222 268999
Q ss_pred EeCCChHH-HHHhhccccCCCEEEEEeccCCcccccchH
Q 020487 213 LDCMGASY-FQRNLGSLNIDGRLFIIGTQGGAKTELNIT 250 (325)
Q Consensus 213 i~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~ 250 (325)
+.|+++.. +.. .+++||-.+..+|.......+++..
T Consensus 193 itaT~s~~Pl~~--~~~~~g~hi~~iGs~~p~~~El~~~ 229 (304)
T PRK07340 193 VTATTSRTPVYP--EAARAGRLVVAVGAFTPDMAELAPR 229 (304)
T ss_pred EEccCCCCceeC--ccCCCCCEEEecCCCCCCcccCCHH
Confidence 99988643 222 2478999999998776555555543
No 489
>TIGR00477 tehB tellurite resistance protein TehB. Part of a tellurite-reducing operon tehA and tehB
Probab=94.71 E-value=0.081 Score=42.95 Aligned_cols=96 Identities=15% Similarity=0.097 Sum_probs=57.1
Q ss_pred hhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCCEEEeCCCchHHHHHHHHhCCCc
Q 020487 133 MTSHLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGADVCINYKTEDFVARVKEETGGKG 208 (325)
Q Consensus 133 ~~~~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~ 208 (325)
......++.+||-.|+ +.|..+..+++ .|.+|++++.++...+.+++ .+...... ..+.. .. .. ...
T Consensus 24 ~~~~~~~~~~vLDiGc--G~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~--~~d~~-~~--~~-~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLGC--GQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTD--AYDIN-AA--AL-NED 94 (195)
T ss_pred HHhccCCCCcEEEeCC--CCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeE--eccch-hc--cc-cCC
Confidence 3334455678999986 45777777776 48899999999887665543 22221110 00100 00 01 236
Q ss_pred ccEEEeCC-----Ch----HHHHHhhccccCCCEEEEE
Q 020487 209 VDVILDCM-----GA----SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 209 ~d~vi~~~-----g~----~~~~~~~~~l~~~g~~v~~ 237 (325)
+|+|+.+. .. ..+..+.+.|+|||.++.+
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~ 132 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIV 132 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 99997652 21 2356777889999996554
No 490
>PRK06849 hypothetical protein; Provisional
Probab=94.71 E-value=0.38 Score=43.61 Aligned_cols=96 Identities=8% Similarity=0.130 Sum_probs=62.7
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH-cCCCEEEeC---CCchHHHHHHHHhCCCcccEEEe
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD-LGADVCINY---KTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~-~g~~~~~~~---~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
...+|||+|+....|+.+++.++..|.+|++++.++........ ......++. +...+.+.+.+.....++|+++-
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~vIP 82 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLLIP 82 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 35789999998889999999999999999999977654432222 111122321 22345677777766668999998
Q ss_pred CCChHH-HHHhhccccCCCEE
Q 020487 215 CMGASY-FQRNLGSLNIDGRL 234 (325)
Q Consensus 215 ~~g~~~-~~~~~~~l~~~g~~ 234 (325)
+..... +....+.+.++.++
T Consensus 83 ~~e~~~~~a~~~~~l~~~~~v 103 (389)
T PRK06849 83 TCEEVFYLSHAKEELSAYCEV 103 (389)
T ss_pred CChHHHhHHhhhhhhcCCcEE
Confidence 876542 23334455555443
No 491
>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional
Probab=94.69 E-value=0.18 Score=42.79 Aligned_cols=93 Identities=25% Similarity=0.252 Sum_probs=60.3
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHH----cCCC---EEEeCCCchHHHHHHHHhCCCccc
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKD----LGAD---VCINYKTEDFVARVKEETGGKGVD 210 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~----~g~~---~~~~~~~~~~~~~~~~~~~~~~~d 210 (325)
.++.+||-.|+ +.|..+..+++. |.+|++++.+++..+.+++ .|.. .++..+.. .+... ....||
T Consensus 43 ~~~~~vLDiGc--G~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~----~l~~~-~~~~fD 114 (255)
T PRK11036 43 PRPLRVLDAGG--GEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQ----DIAQH-LETPVD 114 (255)
T ss_pred CCCCEEEEeCC--CchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHH----HHhhh-cCCCCC
Confidence 45678998886 467777777775 8899999999988877664 2321 12221111 12111 234799
Q ss_pred EEEeCCC-----h--HHHHHhhccccCCCEEEEEe
Q 020487 211 VILDCMG-----A--SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 211 ~vi~~~g-----~--~~~~~~~~~l~~~g~~v~~g 238 (325)
+|+.... . ..+..+.+.|+|||.++.+-
T Consensus 115 ~V~~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~~ 149 (255)
T PRK11036 115 LILFHAVLEWVADPKSVLQTLWSVLRPGGALSLMF 149 (255)
T ss_pred EEEehhHHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence 9985432 1 23677789999999998763
No 492
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=94.69 E-value=0.21 Score=39.01 Aligned_cols=80 Identities=19% Similarity=0.140 Sum_probs=53.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeC-CCchHHHHHHHHhC-CCcccEEEeCC
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINY-KTEDFVARVKEETG-GKGVDVILDCM 216 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~-~~~~d~vi~~~ 216 (325)
.|..|+++|+..++|...++-+...|++|+++.|+++.+..+-+.-...+..- -+.+-++.+.+... -..+|..++..
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~p~~I~Pi~~Dls~wea~~~~l~~v~pidgLVNNA 85 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKETPSLIIPIVGDLSAWEALFKLLVPVFPIDGLVNNA 85 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhCCcceeeeEecccHHHHHHHhhcccCchhhhhccc
Confidence 47889999998999999999999999999999999998866543222222111 11122444454433 23457777776
Q ss_pred Ch
Q 020487 217 GA 218 (325)
Q Consensus 217 g~ 218 (325)
|.
T Consensus 86 gv 87 (245)
T KOG1207|consen 86 GV 87 (245)
T ss_pred hh
Confidence 65
No 493
>PRK13255 thiopurine S-methyltransferase; Reviewed
Probab=94.67 E-value=0.22 Score=41.17 Aligned_cols=99 Identities=19% Similarity=0.130 Sum_probs=59.1
Q ss_pred CCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHH-HcCCCE---------EEeCCC-chHHHHHHHHh
Q 020487 136 HLSPGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCK-DLGADV---------CINYKT-EDFVARVKEET 204 (325)
Q Consensus 136 ~~~~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~---------~~~~~~-~~~~~~~~~~~ 204 (325)
.+.++.+||+.|+ +.|.-+..+|. .|++|++++.++...+.+. +.+... ...... ..+..++.+..
T Consensus 34 ~~~~~~rvL~~gC--G~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~ 110 (218)
T PRK13255 34 ALPAGSRVLVPLC--GKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALT 110 (218)
T ss_pred CCCCCCeEEEeCC--CChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCC
Confidence 3456789999996 46777777775 6999999999999887653 322210 000000 00011111110
Q ss_pred --CCCcccEEEeCCC-----h----HHHHHhhccccCCCEEEEE
Q 020487 205 --GGKGVDVILDCMG-----A----SYFQRNLGSLNIDGRLFII 237 (325)
Q Consensus 205 --~~~~~d~vi~~~g-----~----~~~~~~~~~l~~~g~~v~~ 237 (325)
....||.++|... . ..+..+.+.|+|||+++++
T Consensus 111 ~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 111 AADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred cccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 1126899998653 1 2356778899999975544
No 494
>PRK00811 spermidine synthase; Provisional
Probab=94.60 E-value=0.35 Score=41.76 Aligned_cols=94 Identities=21% Similarity=0.272 Sum_probs=59.8
Q ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCC-EEEEEecChhhHHHHHHc-C-----C--C---EEEeCCCchHHHHHHHHhC
Q 020487 138 SPGESFLVHGGSSGIGTFAIQMGKCQGV-RVFVTAGSEEKLAVCKDL-G-----A--D---VCINYKTEDFVARVKEETG 205 (325)
Q Consensus 138 ~~~~~vli~g~~g~~G~~~~~~a~~~g~-~v~~~~~~~~~~~~~~~~-g-----~--~---~~~~~~~~~~~~~~~~~~~ 205 (325)
.+.++||++|+ +.|..+..+++..+. +|++++.+++-.+.+++. . . + .++..+. ...+.+ .
T Consensus 75 ~~p~~VL~iG~--G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da---~~~l~~--~ 147 (283)
T PRK00811 75 PNPKRVLIIGG--GDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDG---IKFVAE--T 147 (283)
T ss_pred CCCCEEEEEec--CchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECch---HHHHhh--C
Confidence 34678999996 347777788887665 899999998877777642 1 1 1 1222222 222222 2
Q ss_pred CCcccEEEeCCCh-----------HHHHHhhccccCCCEEEEEe
Q 020487 206 GKGVDVILDCMGA-----------SYFQRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 206 ~~~~d~vi~~~g~-----------~~~~~~~~~l~~~g~~v~~g 238 (325)
.+.||+|+--... +.+..+.+.|+++|.++...
T Consensus 148 ~~~yDvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~~ 191 (283)
T PRK00811 148 ENSFDVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQS 191 (283)
T ss_pred CCcccEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 3479999864321 12456678999999998753
No 495
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=94.60 E-value=0.2 Score=35.96 Aligned_cols=86 Identities=19% Similarity=0.247 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.+|||.|+ |.+|..-++.+...|++|+++.... ...+ +.-.... ..+. +. -.++++|+.+.+.
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~--~~i~~~~---~~~~----~~--l~~~~lV~~at~d 70 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE--GLIQLIR---REFE----ED--LDGADLVFAATDD 70 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH--TSCEEEE---SS-G----GG--CTTESEEEE-SS-
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh--hHHHHHh---hhHH----HH--HhhheEEEecCCC
Confidence 4789999998 9999999999999999999999775 2222 1111221 1111 11 2368999999998
Q ss_pred HHHH-HhhccccCCCEEEEEec
Q 020487 219 SYFQ-RNLGSLNIDGRLFIIGT 239 (325)
Q Consensus 219 ~~~~-~~~~~l~~~g~~v~~g~ 239 (325)
+.+. .+....+.-+.++....
T Consensus 71 ~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 71 PELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp HHHHHHHHHHHHHTTSEEEETT
T ss_pred HHHHHHHHHHHhhCCEEEEECC
Confidence 7764 44455566777776644
No 496
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=94.59 E-value=0.094 Score=45.40 Aligned_cols=32 Identities=28% Similarity=0.335 Sum_probs=29.5
Q ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEecC
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGS 173 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~ 173 (325)
+|||+|++|.+|.++...++..|.+|+.+.+.
T Consensus 2 riLI~GasG~lG~~l~~~l~~~~~~v~~~~r~ 33 (286)
T PF04321_consen 2 RILITGASGFLGSALARALKERGYEVIATSRS 33 (286)
T ss_dssp EEEEETTTSHHHHHHHHHHTTTSEEEEEESTT
T ss_pred EEEEECCCCHHHHHHHHHHhhCCCEEEEeCch
Confidence 69999999999999999999999999999755
No 497
>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=94.57 E-value=0.44 Score=40.71 Aligned_cols=77 Identities=17% Similarity=0.225 Sum_probs=57.9
Q ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHcCCCEEEeCCCchHHHHHHHHhCCCcccEEEeCCCh
Q 020487 139 PGESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDLGADVCINYKTEDFVARVKEETGGKGVDVILDCMGA 218 (325)
Q Consensus 139 ~~~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~ 218 (325)
.|.++.|+|-+..+|..++.++...|++|+....... .+.+.+. .+|+++.++|.
T Consensus 151 ~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~-----------------------~L~~~~~--~ADIvI~Avgk 205 (279)
T PRK14178 151 AGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTE-----------------------NLKAELR--QADILVSAAGK 205 (279)
T ss_pred CCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChh-----------------------HHHHHHh--hCCEEEECCCc
Confidence 5899999999889999999999999999988774321 2222222 58999999996
Q ss_pred HHHHHhhccccCCCEEEEEeccC
Q 020487 219 SYFQRNLGSLNIDGRLFIIGTQG 241 (325)
Q Consensus 219 ~~~~~~~~~l~~~g~~v~~g~~~ 241 (325)
+.+ -.-+.+++|..++++|...
T Consensus 206 ~~l-v~~~~vk~GavVIDVgi~~ 227 (279)
T PRK14178 206 AGF-ITPDMVKPGATVIDVGINQ 227 (279)
T ss_pred ccc-cCHHHcCCCcEEEEeeccc
Confidence 543 1134579999999998653
No 498
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=94.56 E-value=0.13 Score=38.20 Aligned_cols=89 Identities=9% Similarity=0.074 Sum_probs=53.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHC-CCEEEEEecChh-hHHHHH-Hc----CCCE-EEeCCCchHHHHHHHHhCCCcccEEE
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQ-GVRVFVTAGSEE-KLAVCK-DL----GADV-CINYKTEDFVARVKEETGGKGVDVIL 213 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~-g~~v~~~~~~~~-~~~~~~-~~----g~~~-~~~~~~~~~~~~~~~~~~~~~~d~vi 213 (325)
+|.|+|++|-+|..+++++..+ .++++.+..+.. .-..+. .. +... .+.... ...+ ...|++|
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~------~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDAD---PEEL------SDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETS---GHHH------TTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecc---hhHh------hcCCEEE
Confidence 5899999999999999999887 457666554444 211121 11 1211 121111 1111 3799999
Q ss_pred eCCChHHHHHhhcc-ccCCCEEEEEec
Q 020487 214 DCMGASYFQRNLGS-LNIDGRLFIIGT 239 (325)
Q Consensus 214 ~~~g~~~~~~~~~~-l~~~g~~v~~g~ 239 (325)
.|.+.......... ++.|-++++.+.
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 72 LALPHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence 99998776555444 566667887754
No 499
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=94.56 E-value=0.16 Score=44.24 Aligned_cols=76 Identities=18% Similarity=0.128 Sum_probs=44.6
Q ss_pred EEEEEcCCchHHHHHHHHHHHCC--CEEEEEecCh--hhHHHHHHcC---CCEEEeCCCchHHHHHHHHhCCCcccEEEe
Q 020487 142 SFLVHGGSSGIGTFAIQMGKCQG--VRVFVTAGSE--EKLAVCKDLG---ADVCINYKTEDFVARVKEETGGKGVDVILD 214 (325)
Q Consensus 142 ~vli~g~~g~~G~~~~~~a~~~g--~~v~~~~~~~--~~~~~~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~ 214 (325)
+|+|+|++|.+|..+++.+...| .+|+++.+.. .+.+.+.++. ...++..+-.+ .+.+.+...+..+|+||+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~-~~~~~~~~~~~~~d~vi~ 79 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLADLEDNPRYRFVKGDIGD-RELVSRLFTEHQPDAVVH 79 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhhhhccCCCcEEEEcCCcC-HHHHHHHHhhcCCCEEEE
Confidence 48999999999999999887766 6888876532 1222222221 11223222111 223333333335899999
Q ss_pred CCCh
Q 020487 215 CMGA 218 (325)
Q Consensus 215 ~~g~ 218 (325)
+++.
T Consensus 80 ~a~~ 83 (317)
T TIGR01181 80 FAAE 83 (317)
T ss_pred cccc
Confidence 9863
No 500
>PRK05708 2-dehydropantoate 2-reductase; Provisional
Probab=94.56 E-value=0.19 Score=43.90 Aligned_cols=95 Identities=13% Similarity=0.156 Sum_probs=59.3
Q ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEecChhhHHHHHHc-CCCEEEeCCCchHHHHHHHH--hCCCcccEEEeCCC
Q 020487 141 ESFLVHGGSSGIGTFAIQMGKCQGVRVFVTAGSEEKLAVCKDL-GADVCINYKTEDFVARVKEE--TGGKGVDVILDCMG 217 (325)
Q Consensus 141 ~~vli~g~~g~~G~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~--~~~~~~d~vi~~~g 217 (325)
.+|+|+|+ |++|...+..+...|.+|+.+.+..++.+..++. |. .+.+....... ..... .....+|++|-|+=
T Consensus 3 m~I~IiGa-GaiG~~~a~~L~~~G~~V~lv~r~~~~~~~i~~~~Gl-~i~~~g~~~~~-~~~~~~~~~~~~~D~viv~vK 79 (305)
T PRK05708 3 MTWHILGA-GSLGSLWACRLARAGLPVRLILRDRQRLAAYQQAGGL-TLVEQGQASLY-AIPAETADAAEPIHRLLLACK 79 (305)
T ss_pred ceEEEECC-CHHHHHHHHHHHhCCCCeEEEEechHHHHHHhhcCCe-EEeeCCcceee-ccCCCCcccccccCEEEEECC
Confidence 36999998 9999988888888899999999988777777643 32 22111110000 00000 01136899998876
Q ss_pred hHHH----HHhhccccCCCEEEEEe
Q 020487 218 ASYF----QRNLGSLNIDGRLFIIG 238 (325)
Q Consensus 218 ~~~~----~~~~~~l~~~g~~v~~g 238 (325)
...+ ..+...+.++..++.+.
T Consensus 80 ~~~~~~al~~l~~~l~~~t~vv~lQ 104 (305)
T PRK05708 80 AYDAEPAVASLAHRLAPGAELLLLQ 104 (305)
T ss_pred HHhHHHHHHHHHhhCCCCCEEEEEe
Confidence 5443 34445567777777764
Done!