BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020491
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Z92|RING4_ARATH E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana
GN=At4g11680 PE=2 SV=1
Length = 390
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/321 (72%), Positives = 268/321 (83%), Gaps = 13/321 (4%)
Query: 1 MREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSQNERPNMPL 60
MREPSM+VRETAAEQLEERQSDWAYSKPVV LDI+WNLAFVA+ +V++LS++E+PNMPL
Sbjct: 81 MREPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPL 140
Query: 61 RLWIVGYAIQCVLHMVCVCVEYKRRSRRRVSAFGGAEEGNLNSGTTRGDSGEYVSLANQL 120
R+W+VGY IQC LHM CVCVEY+RR RRR GG SG T S +YVSLA QL
Sbjct: 141 RVWVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGG------SGLTNSSSQQYVSLA-QL 193
Query: 121 EEEG-TSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPLLYWLCIIFLGFDVFF 179
E+ G TS+ AKHLESANTMFSFIWWIIGFYWVSAGGQ L+ DSP LYWLCIIFLGFDVFF
Sbjct: 194 EDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFF 253
Query: 180 VVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIERLSKFKFRRMVDTEKLSD 239
VVFCVALAC+IG+AVCCCLPCIIAILYAVAD QEGASK DI+++ KF+F + + EKLS
Sbjct: 254 VVFCVALACVIGLAVCCCLPCIIAILYAVAD-QEGASKNDIDQMPKFRFTKTGNVEKLS- 311
Query: 240 DGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKW 299
G GIMTECGT++P E LS EDAECCICL Y+DGVELRELPC HHFHC C+DKW
Sbjct: 312 ---GKARGIMTECGTDSPIERSLSPEDAECCICLCEYEDGVELRELPCNHHFHCTCIDKW 368
Query: 300 LYINATCPLCKYNILKSSSNQ 320
L+IN+ CPLCK+NILK+++N+
Sbjct: 369 LHINSRCPLCKFNILKNANNE 389
>sp|Q9LN71|RING1_ARATH E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana
GN=At1g12760 PE=2 SV=1
Length = 408
Score = 441 bits (1135), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/343 (71%), Positives = 282/343 (82%), Gaps = 24/343 (6%)
Query: 1 MREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSQNERPNMPL 60
MREPSM+VRE AAEQLEERQSDWAYSKPVVVLDI+WNLAFV+VA +++V+S+ E P MPL
Sbjct: 72 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPL 131
Query: 61 RLWIVGYAIQCVLHMVCVCVEYKRRSRRRVSAFGGA-----------------EEGNLNS 103
R+W++GYA+QCVLHMVCVCVEY+RR+RRR + EE L
Sbjct: 132 RVWLLGYALQCVLHMVCVCVEYRRRNRRRTNRTTTTTPPRSRSSSSSSSSSSLEEEAL-- 189
Query: 104 GTTRGDSGEYVSLANQLEEEGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSP 163
G+ R + +SL + L+ E +SSVAKHLESANTMFSFIWWIIGFYWVSAGGQ LA++SP
Sbjct: 190 GSRRNSGVQDLSLGH-LDTE-SSSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESP 247
Query: 164 LLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIERL 223
+YWL I+FLGFDVFFVVFCVALAC+IGIAVCCCLPCIIA+LYAVAD QEGASKEDIE+L
Sbjct: 248 RIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAD-QEGASKEDIEQL 306
Query: 224 SKFKFRRMVDTEK-LSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVEL 282
+KFKFR++ D K +D+ QG+ GIMTECGT++P EH L EDAECCICLSAY+DG EL
Sbjct: 307 TKFKFRKLGDANKHTNDEAQGTTEGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTEL 366
Query: 283 RELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQDREEV 325
RELPCGHHFHC+CVDKWLYINATCPLCKYNILK SSN DREEV
Sbjct: 367 RELPCGHHFHCSCVDKWLYINATCPLCKYNILK-SSNLDREEV 408
>sp|Q8LDB8|RING2_ARATH E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana
GN=At1g63170 PE=2 SV=2
Length = 381
Score = 417 bits (1073), Expect = e-116, Method: Compositional matrix adjust.
Identities = 238/341 (69%), Positives = 274/341 (80%), Gaps = 21/341 (6%)
Query: 1 MREPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSQNERPNMPL 60
MREPSM+VRE AAEQLEERQSDWAYSKPVVVLD +WNLAFV VA +V+VLS +E PNMPL
Sbjct: 46 MREPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPL 105
Query: 61 RLWIVGYAIQCVLHMVCVCVEYKRRSRRRVSAFGGA-------------EEGNLNSGTTR 107
R+WI+GY +QC++HMVCVCVEY+RR+ RR EE L G +R
Sbjct: 106 RVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGL--GLSR 163
Query: 108 GDSGEYVSLANQLEEEGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPLLYW 167
Y+ L QLE E +S AKHLESANTM SFIWW+IGFYWVS+GGQ LA+ SP LYW
Sbjct: 164 NSDERYLELG-QLENE-NNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYW 221
Query: 168 LCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIERLSKFK 227
LCI+FLGFDVFFVVFCVALAC+IGIAVCCCLPCIIA+LYAVA +QEGASKEDI++L+KFK
Sbjct: 222 LCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVA-EQEGASKEDIDQLTKFK 280
Query: 228 FRRMVDTEKLSDD---GQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRE 284
FR++ DT K + D GQG GG+MTECGT++P EH L +EDAECCICLSAY+D ELRE
Sbjct: 281 FRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSAYEDETELRE 340
Query: 285 LPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQDREEV 325
LPCGHHFHC CVDKWLYINATCPLCKYNILKSS+ ++ EEV
Sbjct: 341 LPCGHHFHCGCVDKWLYINATCPLCKYNILKSSNYEEGEEV 381
>sp|Q8GUU2|RIE1_ARATH E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana GN=RIE1
PE=2 SV=1
Length = 359
Score = 311 bits (798), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 163/320 (50%), Positives = 201/320 (62%), Gaps = 12/320 (3%)
Query: 2 REPSMMVRETAAEQLEERQSDWAYSKPVVVLDIIWNLAFVAVAFSVMVLSQNERPNMPLR 61
R PSM+VRETAA LEER+ DW YSKPVV DI+WN A V + ++V + ERPN P+R
Sbjct: 50 RAPSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIR 109
Query: 62 LWIVGYAIQCVLHMVCVCVEYKRR-SRRRVSAFGGAEEGNLNSGTTRGDSGEYVSLANQL 120
+WI Y +QC+ H+V V EY RR S RR + + N EY +
Sbjct: 110 VWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNI--------EYDYEQDSD 161
Query: 121 EEEGTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPLLYWLCIIFLGFDVFFV 180
+ T S K ES NT+ SFIWWIIGFYWV GG L ++P LYWL +IFL DVFF
Sbjct: 162 DNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFA 221
Query: 181 VFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIERLSKFKFRRMVDTEKLSDD 240
VFCV LAC++GIA+CCCLPCIIA+LYAVA EG S+ ++ L +KF+ EK +
Sbjct: 222 VFCVVLACLVGIALCCCLPCIIALLYAVAG-TEGVSEAELGVLPLYKFKAFHSNEK-NIT 279
Query: 241 GQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWL 300
G G I G E L EDA+CCICLS+Y+DG EL LPC HHFH C+ KWL
Sbjct: 280 GPGKMVPIPIN-GLCLATERTLLAEDADCCICLSSYEDGAELHALPCNHHFHSTCIVKWL 338
Query: 301 YINATCPLCKYNILKSSSNQ 320
+ ATCPLCKYNILK +++Q
Sbjct: 339 KMRATCPLCKYNILKGTTDQ 358
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 79/164 (48%), Gaps = 26/164 (15%)
Query: 156 QALARDSPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGA 215
Q L P Y+ IFL FFVV V+L C+I +L + +Q
Sbjct: 203 QHLPPRQPTEYFDMGIFL---AFFVV--VSLVCLI-------------LLVKIKLKQR-R 243
Query: 216 SKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSA 275
S+ + RL+ +M +T K + +G + G CG + + S ++C ICL
Sbjct: 244 SQNSMNRLAVQALEKM-ETRKFNSKSKGRREG---SCGAL---DTLSSGSTSDCAICLEK 296
Query: 276 YDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSN 319
Y DG ELR +PC H FH CVD WL + TCP C++NI++ N
Sbjct: 297 YIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 340
>sp|Q9ULT6|ZNRF3_HUMAN E3 ubiquitin-protein ligase ZNRF3 OS=Homo sapiens GN=ZNRF3 PE=1
SV=3
Length = 936
Score = 72.4 bits (176), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 77/157 (49%), Gaps = 26/157 (16%)
Query: 163 PLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIER 222
P Y+ IFL FFVV V+L C+I +L + +Q S+ + R
Sbjct: 213 PTEYFDMGIFL---AFFVV--VSLVCLI-------------LLVKIKLKQR-RSQNSMNR 253
Query: 223 LSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVEL 282
L+ +M +T K + +G + G CG + S+ ++C ICL Y DG EL
Sbjct: 254 LAVQALEKM-ETRKFNSKSKGRREG---SCGALD---TLSSSSTSDCAICLEKYIDGEEL 306
Query: 283 RELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSN 319
R +PC H FH CVD WL + TCP C++NI++ N
Sbjct: 307 RVIPCTHRFHRKCVDPWLLQHHTCPHCRHNIIEQKGN 343
>sp|Q4KLR8|ZNRF3_XENLA E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus laevis GN=znrf3 PE=2
SV=1
Length = 784
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 26/153 (16%)
Query: 163 PLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAILYAVADQQEGASKEDIER 222
P Y+ IFL FFVV V+L C+I + I Q ++ ++
Sbjct: 122 PTEYFDMGIFL---AFFVV--VSLVCLILLI---------KIKLKQRRSQNSMNRMAVQA 167
Query: 223 LSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVEL 282
L K + R+ K+S +GS GG+ T + S+ ++C ICL Y DG EL
Sbjct: 168 LEKMETRKFKAKGKVSR--EGSCGGLDT----------LSSSSISDCAICLEKYIDGEEL 215
Query: 283 RELPCGHHFHCACVDKWLYINATCPLCKYNILK 315
R +PC H FH CVD WL N TCP C++NI++
Sbjct: 216 RVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 248
>sp|E9QAU8|RN165_MOUSE RING finger protein 165 OS=Mus musculus GN=Rnf165 PE=2 SV=1
Length = 347
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 22/103 (21%)
Query: 214 GASKEDIERLS---KFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECC 270
GA + IER + K+K RR D++ D+G+ S + D +C
Sbjct: 256 GAVQNTIERFTFPHKYKKRRPQDSKGKKDEGEES-------------------DTDEKCT 296
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
ICLS +DG ++R LPC H FH CVD+WL ++ CP+C+ +I
Sbjct: 297 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 339
>sp|Q6ZSG1|RN165_HUMAN RING finger protein 165 OS=Homo sapiens GN=RNF165 PE=1 SV=1
Length = 346
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 22/103 (21%)
Query: 214 GASKEDIERLS---KFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECC 270
GA + IER + K+K RR D + D+G+ S + D +C
Sbjct: 255 GAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEES-------------------DTDEKCT 295
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
ICLS +DG ++R LPC H FH CVD+WL ++ CP+C+ +I
Sbjct: 296 ICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDI 338
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C++ Y +G +LR+LPC H +H C+D+WL N+TCP+C+ +L S
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLSS 593
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C++ Y +G +LR+LPC H +H C+D+WL N+TCP+C+ +L S
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLAS 617
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 314
C +C++ Y +G +LR+LPC H +H C+D+WL N+TCP+C+ +L
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVL 748
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 38/52 (73%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQ 320
C +C++ Y +G +LR+LPC H +H C+D+WL N+TCP+C+ +L +S+ +
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRRAVLVASNRE 619
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 314
C +C++ Y +G +LR+LPC H +H C+D+WL N+TCP+C+ +L
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVL 630
>sp|Q90972|RNF13_CHICK E3 ubiquitin-protein ligase RNF13 OS=Gallus gallus GN=RNF13 PE=1
SV=1
Length = 381
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKSSSNQDRE 323
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S + D E
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSE 295
>sp|Q5SPX3|RN215_MOUSE RING finger protein 215 OS=Mus musculus GN=Rnf215 PE=2 SV=1
Length = 379
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 188 CIIGIAVCCCLPCIIAILYAVA--DQQEGASKED------IERLSKFKFRRMVDTEKLSD 239
I+ +A+ C ++ + +QQE +ED + RL+ K RR +LS
Sbjct: 259 AILLVAMLLCTGLVVQAQRQASRQNQQEPGGQEDLFKRRVVRRLASLKTRRC----RLSR 314
Query: 240 DGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDGVELRELPCGHHFHCACVDKW 299
+ E GTET C +CL + + LR LPC H FH CVD W
Sbjct: 315 AAHS-----LPEPGTET------------CAVCLDYFCNKQWLRVLPCKHEFHRDCVDPW 357
Query: 300 LYINATCPLCKYNILKSSSNQD 321
L + TCPLCK+N+L + + D
Sbjct: 358 LMLQQTCPLCKFNVLGNHYSDD 379
>sp|Q08D68|ZNRF3_XENTR E3 ubiquitin-protein ligase ZNRF3 OS=Xenopus tropicalis GN=znrf3
PE=2 SV=1
Length = 853
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 32/47 (68%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 315
C ICL Y DG ELR +PC H FH CVD WL N TCP C++NI++
Sbjct: 266 CAICLEKYIDGEELRVIPCTHRFHKRCVDPWLLQNHTCPHCRHNIIE 312
>sp|Q8W571|ATL32_ARATH RING-H2 finger protein ATL32 OS=Arabidopsis thaliana GN=ATL32 PE=2
SV=3
Length = 323
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 8/95 (8%)
Query: 238 SDDGQGSQGGIMTECGTETP-------NEHVLSNEDAECCICLSAYDDGVELRELP-CGH 289
++DG +GG+ P E + ++D EC ICL+ +D +R LP C H
Sbjct: 86 ANDGSSRRGGLDNAVVESFPVFAYSSVKESKIGSKDLECAICLNELEDHETVRLLPICNH 145
Query: 290 HFHCACVDKWLYINATCPLCKYNILKSSSNQDREE 324
FH C+D WLY +ATCP+C+ N+ S+ E+
Sbjct: 146 LFHIDCIDTWLYSHATCPVCRSNLTAKSNKPGDED 180
>sp|Q9Y6U7|RN215_HUMAN RING finger protein 215 OS=Homo sapiens GN=RNF215 PE=2 SV=2
Length = 377
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 21/102 (20%)
Query: 220 IERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICLSAYDDG 279
+ RL+ K RR +LS QG + + G ET C +CL + +
Sbjct: 297 VRRLASLKTRRC----RLSRAAQG-----LPDPGAET------------CAVCLDYFCNK 335
Query: 280 VELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSSNQD 321
LR LPC H FH CVD WL + TCPLCK+N+L + + D
Sbjct: 336 QWLRVLPCKHEFHRDCVDPWLMLQQTCPLCKFNVLGNRYSDD 377
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 64.7 bits (156), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSS 317
C +C+S Y G +LR+LPC H FH C+D+WL N TCP+C+ +L S+
Sbjct: 632 CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQPVLGSN 680
>sp|A5WWA0|ZNRF3_DANRE E3 ubiquitin-protein ligase ZNRF3 OS=Danio rerio GN=znrf3 PE=3 SV=2
Length = 868
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 31/46 (67%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 314
C ICL Y DG ELR +PC H FH CVD WL + TCP C++NI+
Sbjct: 267 CAICLEKYIDGEELRVIPCAHRFHKKCVDPWLLQHHTCPHCRHNII 312
>sp|Q5R476|RN111_PONAB E3 ubiquitin-protein ligase Arkadia OS=Pongo abelii GN=RNF111 PE=2
SV=1
Length = 986
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 933 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 978
>sp|Q99ML9|RN111_MOUSE E3 ubiquitin-protein ligase Arkadia OS=Mus musculus GN=Rnf111 PE=1
SV=1
Length = 989
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 936 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 981
>sp|Q6ZNA4|RN111_HUMAN E3 ubiquitin-protein ligase Arkadia OS=Homo sapiens GN=RNF111 PE=1
SV=3
Length = 994
Score = 63.9 bits (154), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 986
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 315
C +C+S Y G +LR+LPC H FH C+D+WL N TCP+C+ +L+
Sbjct: 614 CSVCISDYVAGNKLRQLPCLHEFHIHCIDRWLSENCTCPVCRRPVLE 660
>sp|Q0VD51|RNF13_BOVIN E3 ubiquitin-protein ligase RNF13 OS=Bos taurus GN=RNF13 PE=2 SV=1
Length = 380
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 316
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|Q5RCV8|RNF13_PONAB E3 ubiquitin-protein ligase RNF13 OS=Pongo abelii GN=RNF13 PE=2
SV=1
Length = 381
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 316
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|O43567|RNF13_HUMAN E3 ubiquitin-protein ligase RNF13 OS=Homo sapiens GN=RNF13 PE=1
SV=1
Length = 381
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 316
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S
Sbjct: 240 CAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|O54965|RNF13_MOUSE E3 ubiquitin-protein ligase RNF13 OS=Mus musculus GN=Rnf13 PE=1
SV=2
Length = 381
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 316
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S
Sbjct: 240 CAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|Q66HG0|RNF13_RAT E3 ubiquitin-protein ligase RNF13 OS=Rattus norvegicus GN=Rnf13
PE=2 SV=1
Length = 380
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLY-INATCPLCKYNILKS 316
C ICL Y+DG +LR LPC H +HC CVD WL TCP+CK ++ S
Sbjct: 240 CAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 318
C ICL + +G ELR + C H FH CVD WLY + TCPLC +NI++ S
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRTCVDPWLYQHRTCPLCMFNIVEGDS 321
>sp|Q06003|GOLI_DROME Protein goliath OS=Drosophila melanogaster GN=gol PE=2 SV=3
Length = 461
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 266 DAECC-ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILK 315
D++CC IC+ AY +R LPC H FH C+D WL + TCP+CK ++LK
Sbjct: 299 DSDCCAICIEAYKPTDTIRILPCKHEFHKNCIDPWLIEHRTCPMCKLDVLK 349
>sp|Q7L0R7|RNF44_HUMAN RING finger protein 44 OS=Homo sapiens GN=RNF44 PE=2 SV=1
Length = 432
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 29/100 (29%)
Query: 211 QQEGASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECC 270
+ G +K DIE+L ++F P+ H +E C
Sbjct: 351 KPRGLTKADIEQLPSYRF---------------------------NPDSH--QSEQTLCV 381
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 310
+C S ++ LR LPC H FH CVDKWL N TCP+C+
Sbjct: 382 VCFSDFEARQLLRVLPCNHEFHTKCVDKWLKANRTCPICR 421
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 29/97 (29%)
Query: 214 GASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECCICL 273
G +K DIE+L ++F PN H +E C +C+
Sbjct: 437 GLTKADIEQLPSYRF---------------------------NPNNH--QSEQTLCVVCM 467
Query: 274 SAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 310
++ LR LPC H FH CVDKWL N TCP+C+
Sbjct: 468 CDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504
>sp|Q6NRV8|R111B_XENLA E3 ubiquitin-protein ligase arkadia-B OS=Xenopus laevis GN=rnf111-b
PE=2 SV=1
Length = 959
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 906 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 951
>sp|Q3UHJ8|RNF44_MOUSE RING finger protein 44 OS=Mus musculus GN=Rnf44 PE=2 SV=1
Length = 407
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 29/100 (29%)
Query: 211 QQEGASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECC 270
+ G +K DIE+L ++F P+ H +E C
Sbjct: 326 KPRGLTKADIEQLPSYRF---------------------------NPDSH--QSEQTLCV 356
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 310
+C S ++ LR LPC H FH CVDKWL N TCP+C+
Sbjct: 357 VCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 396
>sp|Q6Y290|GOLI_RAT E3 ubiquitin-protein ligase RNF130 OS=Rattus norvegicus GN=Rnf130
PE=1 SV=1
Length = 419
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C+ +Y +R LPC H FH +CVD WL + TCP+CK NILK+
Sbjct: 263 HCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q8VEM1|GOLI_MOUSE E3 ubiquitin-protein ligase RNF130 OS=Mus musculus GN=Rnf130 PE=2
SV=1
Length = 419
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C+ +Y +R LPC H FH +CVD WL + TCP+CK NILK+
Sbjct: 263 HCAVCIESYKQNDVVRVLPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q0V9R0|RN111_XENTR E3 ubiquitin-protein ligase arkadia OS=Xenopus tropicalis GN=rnf111
PE=2 SV=1
Length = 954
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 901 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 946
>sp|Q90ZT7|R111A_XENLA E3 ubiquitin-protein ligase arkadia-A (Fragment) OS=Xenopus laevis
GN=rnf111-a PE=2 SV=1
Length = 923
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 870 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 915
>sp|Q66J97|R111C_XENLA E3 ubiquitin-protein ligase arkadia-C OS=Xenopus laevis GN=rnf111-c
PE=2 SV=1
Length = 967
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNI 313
+C ICLS ++G ++R LPC H FH CVD+WL N CP+C+ +I
Sbjct: 914 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDI 959
>sp|Q4V7B8|RNF44_RAT RING finger protein 44 OS=Rattus norvegicus GN=Rnf44 PE=2 SV=1
Length = 350
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 29/100 (29%)
Query: 211 QQEGASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAECC 270
+ G +K DIE+L ++F P+ H +E C
Sbjct: 269 KPRGLTKADIEQLPSYRF---------------------------NPDSH--QSEQTLCV 299
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 310
+C S ++ LR LPC H FH CVDKWL N TCP+C+
Sbjct: 300 VCFSDFEVRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 339
>sp|Q5DTZ6|RN150_MOUSE RING finger protein 150 OS=Mus musculus GN=Rnf150 PE=2 SV=2
Length = 437
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C+ Y +R LPC H FH +CVD WL + TCP+CK NILK+
Sbjct: 277 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 324
>sp|Q86XS8|GOLI_HUMAN E3 ubiquitin-protein ligase RNF130 OS=Homo sapiens GN=RNF130 PE=1
SV=1
Length = 419
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 268 ECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C+ +Y +R LPC H FH +CVD WL + TCP+CK NILK+
Sbjct: 263 HCAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCKLNILKA 311
>sp|Q9ULK6|RN150_HUMAN RING finger protein 150 OS=Homo sapiens GN=RNF150 PE=2 SV=2
Length = 438
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKS 316
C +C+ Y +R LPC H FH +CVD WL + TCP+CK NILK+
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCKMNILKA 325
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 269 CCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNILKSSS 318
C ICL + +G ELR + C H FH CVD WL+ + TCPLC +NI + S
Sbjct: 272 CAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQHRTCPLCMFNITEGDS 321
>sp|Q08CG8|RNF44_DANRE RING finger protein 44 OS=Danio rerio GN=rnf44 PE=2 SV=1
Length = 448
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 35/100 (35%)
Query: 214 GASKEDIERLSKFKFRRMVDTEKLSDDGQGSQGGIMTECGTETPNEHVLSNEDAE---CC 270
G +K DIE+L ++F L N +E C
Sbjct: 370 GLTKADIEQLPSYRFN--------------------------------LENHQSEQTLCV 397
Query: 271 ICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 310
+C S ++ LR LPC H FH CVDKWL N TCP+C+
Sbjct: 398 VCFSDFESRQLLRVLPCNHEFHAKCVDKWLKTNRTCPICR 437
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 268 ECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYINATCPLCKYN 312
EC +CL+ +DG E R LP CGH FH CVD WL ++TCPLC+
Sbjct: 133 ECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 178
>sp|Q8GYT9|SIS3_ARATH E3 ubiquitin-protein ligase SIS3 OS=Arabidopsis thaliana GN=SIS3
PE=2 SV=2
Length = 358
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 267 AECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCKYNIL 314
EC ICL + G E+R LPC H+FH C+D+WL +N CP C+ ++
Sbjct: 233 GECLICLEEFHIGHEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVF 280
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 264 NEDAECCICLSAYDDGVELRELP-CGHHFHCACVDKWLYINATCPLCK 310
+ EC ICL+ + DG E+R LP CGH FH C+DKWL ++CP C+
Sbjct: 97 GDSTECAICLTDFADGEEIRVLPLCGHSFHVECIDKWLVSRSSCPSCR 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.137 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,890,940
Number of Sequences: 539616
Number of extensions: 5034649
Number of successful extensions: 14857
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 197
Number of HSP's that attempted gapping in prelim test: 14339
Number of HSP's gapped (non-prelim): 555
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)