Your job contains 1 sequence.
>020493
MEGCSKTGEQACPQLLDLMAKERREWRVMRDGEASSSEEKKLELRLGPPGGEDKRWSLKD
STNRERDDHHHQYLLSLGYFSSTNNSNNNGFSFLHHHSSRSLPVMAKESSQPCCTKVADL
QSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESP
NDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLA
AQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLR
VLKSSEVSALSREKFGNSRQDKILA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020493
(325 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088324 - symbol:PAP1 "phytochrome-associated ... 588 7.7e-64 2
TAIR|locus:2195820 - symbol:IAA18 "indole-3-acetic acid i... 527 1.1e-58 2
UNIPROTKB|Q6H543 - symbol:IAA7 "Auxin-responsive protein ... 511 3.3e-51 2
UNIPROTKB|Q8LQ74 - symbol:IAA6 "Auxin-responsive protein ... 476 2.0e-49 2
UNIPROTKB|Q5W670 - symbol:IAA18 "Auxin-responsive protein... 480 1.0e-45 1
UNIPROTKB|Q9LG86 - symbol:IAA2 "Auxin-responsive protein ... 457 2.8e-43 1
TAIR|locus:2180557 - symbol:IAA28 "AT5G25890" species:370... 188 2.9e-31 2
TAIR|locus:2051154 - symbol:IAA13 "auxin-induced protein ... 331 6.2e-30 1
TAIR|locus:2139890 - symbol:IAA11 "indole-3-acetic acid i... 327 1.6e-29 1
TAIR|locus:2119976 - symbol:PAP2 "AT4G29080" species:3702... 319 1.2e-28 1
TAIR|locus:2197838 - symbol:IAA12 "indole-3-acetic acid i... 308 1.7e-27 1
TAIR|locus:2018374 - symbol:AXR3 "AT1G04250" species:3702... 222 3.1e-26 2
TAIR|locus:2094598 - symbol:IAA7 "indole-3-acetic acid 7"... 288 2.2e-25 1
TAIR|locus:2084933 - symbol:IAA16 "indoleacetic acid-indu... 287 2.9e-25 1
TAIR|locus:2020255 - symbol:IAA10 "indoleacetic acid-indu... 286 3.6e-25 1
UNIPROTKB|Q75GK0 - symbol:IAA11 "Auxin-responsive protein... 192 4.9e-24 2
UNIPROTKB|Q5Z749 - symbol:IAA21 "Auxin-responsive protein... 269 2.3e-23 1
UNIPROTKB|Q6AT33 - symbol:IAA19 "Auxin-responsive protein... 268 2.9e-23 1
UNIPROTKB|Q7Y1H8 - symbol:IAA14 "Auxin-responsive protein... 145 1.2e-20 2
UNIPROTKB|Q6ZL57 - symbol:IAA24 "Auxin-responsive protein... 144 1.3e-19 2
TAIR|locus:2034200 - symbol:IAA15 "indole-3-acetic acid i... 131 1.3e-19 3
TAIR|locus:2129900 - symbol:IAA14 "indole-3-acetic acid i... 230 3.1e-19 1
TAIR|locus:2169955 - symbol:IAA9 "indole-3-acetic acid in... 227 6.5e-19 1
UNIPROTKB|Q5VRD1 - symbol:IAA1 "Auxin-responsive protein ... 219 4.6e-18 1
TAIR|locus:2090141 - symbol:IAA19 "indole-3-acetic acid i... 130 7.1e-18 3
UNIPROTKB|Q6AT10 - symbol:IAA15 "Auxin-responsive protein... 214 1.6e-17 1
TAIR|locus:2094578 - symbol:IAA2 "indole-3-acetic acid in... 131 2.4e-17 2
TAIR|locus:2170862 - symbol:ATAUX2-11 "AT5G43700" species... 138 4.0e-17 2
UNIPROTKB|Q75GB1 - symbol:IAA17 "Auxin-responsive protein... 210 4.1e-17 1
UNIPROTKB|P49679 - symbol:IAA4/5 "Auxin-induced protein I... 138 1.7e-16 2
TAIR|locus:2129910 - symbol:IAA1 "indole-3-acetic acid in... 124 1.3e-15 2
UNIPROTKB|Q6Z5M0 - symbol:IAA8 "Auxin-responsive protein ... 190 5.5e-15 1
TAIR|locus:2196573 - symbol:IAA5 "indole-3-acetic acid in... 113 2.9e-14 3
UNIPROTKB|Q75GK1 - symbol:IAA12 "Auxin-responsive protein... 182 5.2e-14 1
TAIR|locus:2041324 - symbol:IAA20 "indole-3-acetic acid i... 117 2.7e-13 2
TAIR|locus:2018379 - symbol:SHY2 "SHORT HYPOCOTYL 2" spec... 131 6.4e-13 2
TAIR|locus:2098023 - symbol:IAA30 "indole-3-acetic acid i... 112 4.9e-12 2
UNIPROTKB|Q652A1 - symbol:IAA26 "Auxin-responsive protein... 152 1.5e-10 1
UNIPROTKB|Q6K846 - symbol:IAA9 "Auxin-responsive protein ... 148 4.2e-10 1
TAIR|locus:2011461 - symbol:IAA6 "indole-3-acetic acid 6"... 122 6.6e-09 2
UNIPROTKB|Q5NB25 - symbol:IAA3 "Auxin-responsive protein ... 152 8.2e-09 1
TAIR|locus:2138096 - symbol:ARF9 "auxin response factor 9... 103 1.3e-08 2
TAIR|locus:2090527 - symbol:IAA31 "indole-3-acetic acid i... 114 1.7e-08 2
TAIR|locus:2116505 - symbol:IAA29 "indole-3-acetic acid i... 93 7.6e-08 3
TAIR|locus:2039124 - symbol:ARF11 "auxin response factor ... 114 1.6e-07 2
TAIR|locus:2038701 - symbol:IAA32 "indole-3-acetic acid i... 98 5.3e-07 2
TAIR|locus:2196184 - symbol:IAA34 "indole-3-acetic acid i... 94 6.8e-07 2
UNIPROTKB|Q5VRR0 - symbol:IAA20 "Auxin-responsive protein... 108 2.0e-05 2
TAIR|locus:2035454 - symbol:MP "MONOPTEROS" species:3702 ... 105 3.3e-05 2
TAIR|locus:2174013 - symbol:ARF2 "auxin response factor 2... 87 6.8e-05 2
TAIR|locus:2076765 - symbol:ARF18 "auxin response factor ... 105 0.00017 2
TAIR|locus:2206717 - symbol:ARF20 "auxin response factor ... 87 0.00023 2
TAIR|locus:2009298 - symbol:ARF21 "auxin response factor ... 89 0.00024 2
TAIR|locus:2202205 - symbol:ARF19 "auxin response factor ... 109 0.00073 3
>TAIR|locus:2088324 [details] [associations]
symbol:PAP1 "phytochrome-associated protein 1"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0006995 "cellular response to
nitrogen starvation" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AP000373 HOGENOM:HOG000238261
UniGene:At.16067 ProtClustDB:CLSN2679451 EMBL:AF088281
EMBL:AF332394 EMBL:AF332401 EMBL:AF386948 EMBL:AY072502
EMBL:AY087745 IPI:IPI00539954 RefSeq:NP_188271.1 UniGene:At.20072
UniGene:At.47260 IntAct:Q8LAL2 EnsemblPlants:AT3G16500.1
GeneID:820898 KEGG:ath:AT3G16500 GeneFarm:3185 TAIR:At3g16500
eggNOG:NOG303951 InParanoid:Q8LAL2 OMA:DEEDHSA PhylomeDB:Q8LAL2
Genevestigator:Q8LAL2 GermOnline:AT3G16500 Uniprot:Q8LAL2
Length = 269
Score = 588 (212.0 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 127/216 (58%), Positives = 157/216 (72%)
Query: 115 TKVADLQSPAEKKAFLSS-----APA-KNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAG 168
T++ +++ E K+F +P+ K T+VP+ SQKRTAP PVVGWPP+RSFRKNLA
Sbjct: 60 TEIRNIKKETEDKSFHCFNGNHFSPSNKTTSVPHISQKRTAPGPVVGWPPVRSFRKNLAS 119
Query: 169 ASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLS 228
S+SKL S +K+ D + E ++ FVKINMDGVPIGRKVDLNAY+SYE+LS
Sbjct: 120 TSSSKLGNESSHGGQINKSDDGEKQVETKKEGMFVKINMDGVPIGRKVDLNAYNSYEQLS 179
Query: 229 AAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVP 288
VD+LFRGLLAAQRD S G Q EEK I G+LDG GE+TL YEDNEGD+MLVGDVP
Sbjct: 180 FVVDKLFRGLLAAQRDISDG-----QGEEKPIIGLLDGKGEFTLTYEDNEGDKMLVGDVP 234
Query: 289 WHMFVSTVTRLRVLKSSEVSALSREKFGNSRQDKIL 324
W MFVS+V RLRV+KSSE+S S FG S+Q+K++
Sbjct: 235 WQMFVSSVKRLRVIKSSEIS--SALTFGCSKQEKMM 268
Score = 81 (33.6 bits), Expect = 7.7e-64, Sum P(2) = 7.7e-64
Identities = 22/65 (33%), Positives = 33/65 (50%)
Query: 1 MEGCSKTGEQACPQLLDLMAKERREWRVMRDGEAXXXXXXXXXXRLGPPGGEDKRWSLKD 60
MEGC + E P+LLDL+ + R+ W ++ + RLGPPGG+++ S
Sbjct: 1 MEGCPRNREIG-PKLLDLIPQGRK-W--YQEDKNNTDQEKKLELRLGPPGGDEEDHSAIK 56
Query: 61 STNRE 65
N E
Sbjct: 57 KKNTE 61
>TAIR|locus:2195820 [details] [associations]
symbol:IAA18 "indole-3-acetic acid inducible 18"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009694 "jasmonic acid metabolic process"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0009753 "response to jasmonic acid stimulus"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
KO:K14484 EMBL:AC015448 EMBL:AF367263 EMBL:AY056062 EMBL:AY088406
EMBL:U49074 IPI:IPI00534235 PIR:H96558 RefSeq:NP_175607.1
UniGene:At.16067 IntAct:O24408 STRING:O24408
EnsemblPlants:AT1G51950.1 GeneID:841623 KEGG:ath:AT1G51950
GeneFarm:3181 TAIR:At1g51950 eggNOG:NOG285609 InParanoid:O24408
OMA:MIPQERR PhylomeDB:O24408 ProtClustDB:CLSN2679451
Genevestigator:O24408 GermOnline:AT1G51950 Uniprot:O24408
Length = 267
Score = 527 (190.6 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 119/214 (55%), Positives = 149/214 (69%)
Query: 117 VADLQSPAEKKAFLSSAPA--KNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKL 174
+ ++ + K+ LS A ++ +S KRTAP PVVGWPP+RSFRKNLA S+SKL
Sbjct: 59 IRHMKKEPKDKSILSLAGKYFSPSSTKTTSHKRTAPGPVVGWPPVRSFRKNLASGSSSKL 118
Query: 175 PA-SESPNDVPSKTVDEKPAH---EPGRKNP-FVKINMDGVPIGRKVDLNAYDSYEKLSA 229
S + N V K A EP R+ FVKINM GVPIGRKVDL+A++SYE+LS
Sbjct: 119 GNDSTTSNGVTLKNQKCDAAAKTTEPKRQGGMFVKINMYGVPIGRKVDLSAHNSYEQLSF 178
Query: 230 AVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPW 289
VD+LFRGLLAAQRD + E+EK ITG+LDG+GEYTL YEDNEGD+MLVGDVPW
Sbjct: 179 TVDKLFRGLLAAQRD-----FPSSIEDEKPITGLLDGNGEYTLTYEDNEGDKMLVGDVPW 233
Query: 290 HMFVSTVTRLRVLKSSEVSALSREKFGNSRQDKI 323
MFVS+V RLRV+K+SE+S S +GN +Q+K+
Sbjct: 234 QMFVSSVKRLRVIKTSEIS--SALTYGNGKQEKM 265
Score = 93 (37.8 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
Identities = 26/69 (37%), Positives = 33/69 (47%)
Query: 1 MEGCSKTGEQACPQLLDLMA-KERREWRVMRDGEAXXXXXXXXXXRLGPPGGEDKRWSLK 59
MEG S+ GE + P+LLDLM +ERR W +LGPPG ED S+
Sbjct: 1 MEGYSRNGEIS-PKLLDLMIPQERRNWFHDEKNSVFKTEEKKLELKLGPPGEEDDDESMI 59
Query: 60 DSTNRERDD 68
+E D
Sbjct: 60 RHMKKEPKD 68
>UNIPROTKB|Q6H543 [details] [associations]
symbol:IAA7 "Auxin-responsive protein IAA7" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG303951 EMBL:AP005394 EMBL:AP005756 EMBL:AK121870
RefSeq:NP_001046357.1 UniGene:Os.7355
EnsemblPlants:LOC_Os02g13520.1 GeneID:4328796
KEGG:dosa:Os02t0228900-01 KEGG:osa:4328796 Gramene:Q6H543
OMA:QEDVAIS ProtClustDB:CLSN2692586 Uniprot:Q6H543
Length = 300
Score = 511 (184.9 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 107/191 (56%), Positives = 138/191 (72%)
Query: 122 SPAEKKAFLSSAPAKNTAVPNSS---QKRTAPAPVVGWPPIRSFRKNLAGASASKLPASE 178
SP E++A A N N++ Q R+ PVVGWPP+R+FR+NLA +S + L E
Sbjct: 105 SPEEEEAHPPPATGNNALASNNNGCFQTRSPSTPVVGWPPVRTFRRNLATSSKASL---E 161
Query: 179 SPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGL 238
N + +E ++ PF+KINMDGVPIGRK+DLNA+DSYEKLS AVD+LFRGL
Sbjct: 162 LQNGKKAAKAEEI------KRAPFIKINMDGVPIGRKIDLNAFDSYEKLSLAVDKLFRGL 215
Query: 239 LAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTR 298
LAAQRD G + Q+E+ AI+G+LDG+GEYTLVYED EGD++LVGDVPW MFVS+V R
Sbjct: 216 LAAQRDPLTAGAKDCQQEDVAISGLLDGTGEYTLVYEDYEGDKVLVGDVPWGMFVSSVKR 275
Query: 299 LRVLKSSEVSA 309
LRVLK+S++S+
Sbjct: 276 LRVLKTSDLSS 286
Score = 38 (18.4 bits), Expect = 3.3e-51, Sum P(2) = 3.3e-51
Identities = 18/60 (30%), Positives = 22/60 (36%)
Query: 30 RDGEAXXXXXXXXXXRLGPPGG------EDKRWSLKDS----TNRERDDHHHQYLLSLGY 79
R G+ LG PGG DK + K S + DD +LSLGY
Sbjct: 29 RHGDEQEEEEKTLELSLGLPGGGWRAACRDKGTTTKHSIAAAAAADDDDGDKSSMLSLGY 88
>UNIPROTKB|Q8LQ74 [details] [associations]
symbol:IAA6 "Auxin-responsive protein IAA6" species:39947
"Oryza sativa Japonica Group" [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=IC] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733 GO:GO:0006417
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691827 eggNOG:NOG303951 EMBL:AP003768
EMBL:AK068600 RefSeq:NP_001044208.1 UniGene:Os.75606 STRING:Q8LQ74
DNASU:4326541 EnsemblPlants:LOC_Os01g53880.2
EnsemblPlants:LOC_Os01g53880.3 EnsemblPlants:LOC_Os01g53880.4
EnsemblPlants:LOC_Os01g53880.5 EnsemblPlants:LOC_Os01g53880.6
GeneID:4326541 KEGG:dosa:Os01t0741900-01 KEGG:osa:4326541
Gramene:Q8LQ74 Uniprot:Q8LQ74
Length = 335
Score = 476 (172.6 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 102/177 (57%), Positives = 127/177 (71%)
Query: 132 SAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEK 191
+ PA+N P + Q R A APVVGWPPIRSFR+NLA +S+SK + E ND + V
Sbjct: 158 ATPARNR--PQT-QGRGAAAPVVGWPPIRSFRRNLASSSSSK-HSPEPQNDNANAKVTLT 213
Query: 192 PAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIV 251
+KNP VKINMDG+PIGRK+DL AY+SY+ LS+AV +LF G L AQ+D + I
Sbjct: 214 C-----KKNPLVKINMDGIPIGRKIDLAAYNSYDGLSSAVKQLFHGFLQAQKDQTNAQIA 268
Query: 252 NKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVS 308
+ ++K +LDGSGEYTLVYED+EGDRMLVGDVPW +FVST RLRVL+SSE+S
Sbjct: 269 QQGADDKIFYQLLDGSGEYTLVYEDSEGDRMLVGDVPWKVFVSTAKRLRVLRSSELS 325
Score = 56 (24.8 bits), Expect = 2.0e-49, Sum P(2) = 2.0e-49
Identities = 22/58 (37%), Positives = 28/58 (48%)
Query: 2 EGCSKTGEQACPQLLDLMAKERREWRVMRDGEAXXXXXXXXXXRLGPPGGEDKRWSLK 59
EG +K E PQLLDL+ E+ EW++ EA G G EDK+ LK
Sbjct: 3 EGSNKR-EGLPPQLLDLIPDEK-EWKLR---EALGLGRSRNA---GFDGEEDKKLDLK 52
>UNIPROTKB|Q5W670 [details] [associations]
symbol:IAA18 "Auxin-responsive protein IAA18" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144740 EMBL:AK071192 RefSeq:NP_001056086.1 UniGene:Os.87732
PRIDE:Q5W670 EnsemblPlants:LOC_Os05g44810.1
EnsemblPlants:LOC_Os05g44810.2 EnsemblPlants:LOC_Os05g44810.3
GeneID:4339365 KEGG:dosa:Os05t0523300-01 KEGG:osa:4339365
Gramene:Q5W670 eggNOG:NOG327576 OMA:IRDEREW ProtClustDB:CLSN2691827
Uniprot:Q5W670
Length = 327
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 101/182 (55%), Positives = 124/182 (68%)
Query: 126 KKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPS 185
KK S P A ++ Q R A PVVGWPPIRSFR+NL S+ K + E ND
Sbjct: 141 KKGCCPSPPCSAAAHSSNPQGRGAIPPVVGWPPIRSFRRNLTNGSSFK-QSPERQND--- 196
Query: 186 KTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDS 245
D+K A +K P VKINMDG+PIGRKVDL YDSY+KLS+AV+ELFRG L AQ+D
Sbjct: 197 -EADDK-AKPICKKRPLVKINMDGIPIGRKVDLQIYDSYQKLSSAVEELFRGFLEAQKDL 254
Query: 246 SAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
S + E+K +G+LDG+G YTLVYEDN+GDRML GD+PW +FVSTV RLRV++ S
Sbjct: 255 SCAESGEQGAEDKIFSGLLDGTGVYTLVYEDNDGDRMLAGDIPWKVFVSTVKRLRVMRRS 314
Query: 306 EV 307
E+
Sbjct: 315 EL 316
>UNIPROTKB|Q9LG86 [details] [associations]
symbol:IAA2 "Auxin-responsive protein IAA2" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP002743
EMBL:AK100314 RefSeq:NP_001042263.1 UniGene:Os.19952 GeneID:4326775
KEGG:dosa:Os01t0190300-01 KEGG:osa:4326775 Gramene:Q9LG86
eggNOG:NOG325733 OMA:KRIEHAP ProtClustDB:CLSN2691155 Uniprot:Q9LG86
Length = 238
Score = 457 (165.9 bits), Expect = 2.8e-43, P = 2.8e-43
Identities = 101/193 (52%), Positives = 125/193 (64%)
Query: 128 AFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKT 187
AF + N + P+ + A APVVGWPP+RSFR+NLA +S+S + P +
Sbjct: 49 AFALRSNGTNASKPSGA---AAAAPVVGWPPVRSFRRNLASSSSSSSKQAPPPPSSSPQN 105
Query: 188 VDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSA 247
D+ K FVKINMDGVPIGRKVDL AY Y +LSAAVD+LFRGLLAAQ ++A
Sbjct: 106 GDKASKDGGAEKGMFVKINMDGVPIGRKVDLAAYGGYAQLSAAVDKLFRGLLAAQ-SAAA 164
Query: 248 GGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEV 307
G E + A G + G GEYTLVYED+EGDRMLVGDVPW MF++T RLRVLKSS++
Sbjct: 165 DG-----EADAAAAGEMVGGGEYTLVYEDDEGDRMLVGDVPWQMFIATAKRLRVLKSSDL 219
Query: 308 SALSREKFGNSRQ 320
S + SR+
Sbjct: 220 PPPSLMRAAGSRK 232
>TAIR|locus:2180557 [details] [associations]
symbol:IAA28 "AT5G25890" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0010102 "lateral
root morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006612 "protein targeting to membrane"
evidence=RCA] [GO:0009963 "positive regulation of flavonoid
biosynthetic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:AF149413
GO:GO:0010102 EMBL:AC005405 HOGENOM:HOG000238261 KO:K14484
EMBL:AF149816 EMBL:BT000427 EMBL:BT002175 IPI:IPI00545995
PIR:T52143 RefSeq:NP_568478.1 UniGene:At.11439 IntAct:Q9XFM0
EnsemblPlants:AT5G25890.1 GeneID:832658 KEGG:ath:AT5G25890
GeneFarm:3188 TAIR:At5g25890 eggNOG:NOG283222 InParanoid:Q9XFM0
OMA:WEMFVST PhylomeDB:Q9XFM0 ProtClustDB:CLSN2917715
Genevestigator:Q9XFM0 GermOnline:AT5G25890 Uniprot:Q9XFM0
Length = 175
Score = 188 (71.2 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 44/92 (47%), Positives = 58/92 (63%)
Query: 144 SQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFV 203
S R APVVGWPP+RS R+NL ++ ES DE+ K +V
Sbjct: 40 SNNRVEVAPVVGWPPVRSSRRNLTAQLKEEMKKKES---------DEE-------KELYV 83
Query: 204 KINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
KINM+GVPIGRKV+L+AY++Y++LS AVD+LF
Sbjct: 84 KINMEGVPIGRKVNLSAYNNYQQLSHAVDQLF 115
Score = 172 (65.6 bits), Expect = 2.9e-31, Sum P(2) = 2.9e-31
Identities = 34/52 (65%), Positives = 40/52 (76%)
Query: 265 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREKFG 316
D + +YTLVYED EGD++LVGDVPW MFVSTV RL VLK+S +LS K G
Sbjct: 122 DLNRQYTLVYEDTEGDKVLVGDVPWEMFVSTVKRLHVLKTSHAFSLSPRKHG 173
>TAIR|locus:2051154 [details] [associations]
symbol:IAA13 "auxin-induced protein 13" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000394 "RNA splicing, via endonucleolytic
cleavage and ligation" evidence=RCA] [GO:0009086 "methionine
biosynthetic process" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002332 HOGENOM:HOG000238261
UniGene:At.10797 ProtClustDB:CLSN2681806 EMBL:U18415 EMBL:AF332399
EMBL:BT005874 EMBL:AY085194 EMBL:Z26543 IPI:IPI00536192
IPI:IPI00548760 PIR:S58499 RefSeq:NP_001118434.1 RefSeq:NP_180889.1
RefSeq:NP_850205.1 UniGene:At.74387 IntAct:Q38831 STRING:Q38831
EnsemblPlants:AT2G33310.2 GeneID:817894 KEGG:ath:AT2G33310
GeneFarm:3160 TAIR:At2g33310 eggNOG:NOG308656 InParanoid:Q38831
OMA:LEDMFFR PhylomeDB:Q38831 Genevestigator:Q38831
GermOnline:AT2G33310 Uniprot:Q38831
Length = 247
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 87/211 (41%), Positives = 119/211 (56%)
Query: 119 DLQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKN-LAGASASKLPAS 177
D S K+A SA ++ P SS + VVGWPPI S R N L A+K A
Sbjct: 50 DFPSVGSKRA-ADSASHAGSSPPRSSSQ------VVGWPPIGSHRMNSLVNNQATK-SAR 101
Query: 178 ESPNDVPSKTVDEKPAHEPGRKNP-----FVKINMDGVPIGRKVDLNAYDSYEKLSAAVD 232
E K D++P + N F+K+NMDGV IGRKVDLNA+ SYE L+ ++
Sbjct: 102 EEEEAGKKKVKDDEPKDVTKKVNGKVQVGFIKVNMDGVAIGRKVDLNAHSSYENLAQTLE 161
Query: 233 ELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 292
++F + + G+ + + K + +LDGS E+ L YED EGD MLVGDVPW MF
Sbjct: 162 DMF-----FRTNPGTVGLTS--QFTKPLR-LLDGSSEFVLTYEDKEGDWMLVGDVPWRMF 213
Query: 293 VSTVTRLRVLKSSEVSALS-REKFGNSRQDK 322
+++V RLRV+K+SE + L+ R + N RQ K
Sbjct: 214 INSVKRLRVMKTSEANGLAARNQEPNERQRK 244
>TAIR|locus:2139890 [details] [associations]
symbol:IAA11 "indole-3-acetic acid inducible 11"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0009506
GO:GO:0005634 EMBL:CP002687 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AL161573 HOGENOM:HOG000238261
IPI:IPI00846427 RefSeq:NP_001078460.1 UniGene:At.25401
STRING:A8MR39 EnsemblPlants:AT4G28640.2 GeneID:828982
KEGG:ath:AT4G28640 OMA:RTADSMA ProtClustDB:CLSN2685745
Genevestigator:A8MR39 Uniprot:A8MR39
Length = 302
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 76/196 (38%), Positives = 106/196 (54%)
Query: 114 CTKVADLQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASK 173
C AD S + + LS A + VVGWPPIR++R N + + +K
Sbjct: 50 CRVYADDSSSSSSSSSLSRASVIAGIKRTADSMAATSGQVVGWPPIRTYRMN-SMVNQAK 108
Query: 174 LPASESPNDVPSKTVDEKPAHEPGRKNP-FVKINMDGVPIGRKVDLNAYDSYEKLSAAVD 232
A+E PN S+ V++ + +N FVK+ MDG+PIGRK+DLNA+ YE LS ++
Sbjct: 109 ASATEDPNLEISQAVNKNRSDSTKMRNSMFVKVTMDGIPIGRKIDLNAHKCYESLSNTLE 168
Query: 233 ELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 292
E+F R G + E + + DGS L YED EGD MLVGDVPW MF
Sbjct: 169 EMFLKPKLGSRTLETDGHM-----ETPVKILPDGSSGLVLTYEDKEGDWMLVGDVPWGMF 223
Query: 293 VSTVTRLRVLKSSEVS 308
+ +V RLR++K+SE +
Sbjct: 224 IGSVRRLRIMKTSEAT 239
>TAIR|locus:2119976 [details] [associations]
symbol:PAP2 "AT4G29080" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=ISS;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 EMBL:AL078470
EMBL:AL161574 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AF087936 EMBL:AJ458326 EMBL:AF332402
EMBL:AY053404 EMBL:AY133516 IPI:IPI00539897 PIR:T08963
RefSeq:NP_194637.1 UniGene:At.3406 IntAct:Q9ZSY8 STRING:Q9ZSY8
EnsemblPlants:AT4G29080.1 GeneID:829029 KEGG:ath:AT4G29080
GeneFarm:3186 TAIR:At4g29080 InParanoid:Q9ZSY8 OMA:HGGSANW
PhylomeDB:Q9ZSY8 ProtClustDB:CLSN2916037 Genevestigator:Q9ZSY8
GermOnline:AT4G29080 Uniprot:Q9ZSY8
Length = 305
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 75/179 (41%), Positives = 105/179 (58%)
Query: 139 AVPNSSQKRTAPAP-----VVGWPPIRSFRKNLAGASASKLPASESPND-VPSKTVDEKP 192
AVP +K +A AP VVGWPPIRSFRKN +S S+ P + S + +K+ E+P
Sbjct: 125 AVPVKEKKSSATAPASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQP 184
Query: 193 AHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVN 252
+VK++M+G P RK+DL Y SY +LS+A++++F Q S GG
Sbjct: 185 CL-------YVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSH-GGCGR 236
Query: 253 KQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
E +T +L GS EY + YED + D MLVGDVPW MF+ + +LR++KSSE L+
Sbjct: 237 DGLNESRLTDLLRGS-EYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLA 294
>TAIR|locus:2197838 [details] [associations]
symbol:IAA12 "indole-3-acetic acid inducible 12"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009733 "response to auxin
stimulus" evidence=IGI] [GO:0009880 "embryonic pattern
specification" evidence=IMP] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010051 "xylem and phloem
pattern formation" evidence=IMP] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0048364 "root
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0010051 EMBL:AC002376 GO:GO:0009880 HOGENOM:HOG000238261
EMBL:U18414 EMBL:AF332398 EMBL:AY065240 EMBL:AY096535 EMBL:AY088042
IPI:IPI00527949 PIR:S58498 RefSeq:NP_171949.1 UniGene:At.10466
UniGene:At.10797 IntAct:Q38830 STRING:Q38830 PRIDE:Q38830
DNASU:839495 EnsemblPlants:AT1G04550.2 GeneID:839495
KEGG:ath:AT1G04550 GeneFarm:3159 TAIR:At1g04550 eggNOG:NOG330636
InParanoid:Q38830 KO:K14484 OMA:WKERGRI PhylomeDB:Q38830
ProtClustDB:CLSN2681806 Genevestigator:Q38830 Uniprot:Q38830
Length = 239
Score = 308 (113.5 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 81/200 (40%), Positives = 110/200 (55%)
Query: 132 SAPAKNTAVPNSSQKRTAP--APVVGWPPIRSFRKN-LAGASASKLPASESPNDVPSKTV 188
S +K +A +S Q + P + VVGWPPI R N L A K +E D K V
Sbjct: 47 SVGSKRSAESSSHQGASPPRSSQVVGWPPIGLHRMNSLVNNQAMKAARAEE-GDGEKKVV 105
Query: 189 DEKPAHEPGRK-NP------FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAA 241
+ K NP FVK+NMDGV IGRKVD+ A+ SYE L+ ++E+F G+
Sbjct: 106 KNDELKDVSMKVNPKVQGLGFVKVNMDGVGIGRKVDMRAHSSYENLAQTLEEMFFGMTGT 165
Query: 242 QRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRV 301
+E+ K + +LDGS ++ L YED EGD MLVGDVPW MF+++V RLR+
Sbjct: 166 ----------TCREKVKPLR-LLDGSSDFVLTYEDKEGDWMLVGDVPWRMFINSVKRLRI 214
Query: 302 LKSSEVSALS-REKFGNSRQ 320
+ +SE S L+ R + RQ
Sbjct: 215 MGTSEASGLAPRRQEQKDRQ 234
>TAIR|locus:2018374 [details] [associations]
symbol:AXR3 "AT1G04250" species:3702 "Arabidopsis
thaliana" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009733 "response to auxin stimulus" evidence=IEP;IMP;TAS]
[GO:0042802 "identical protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009536
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
EMBL:U49073 EMBL:AF040631 EMBL:AF040632 EMBL:AF336916 EMBL:AY070094
EMBL:AY117183 EMBL:AY087284 IPI:IPI00548274 PIR:H86173
RefSeq:NP_171921.1 UniGene:At.20252 IntAct:P93830 STRING:P93830
DNASU:839568 EnsemblPlants:AT1G04250.1 GeneID:839568
KEGG:ath:AT1G04250 GeneFarm:3180 TAIR:At1g04250 eggNOG:NOG250798
InParanoid:P93830 OMA:KEGSTTH PhylomeDB:P93830
ProtClustDB:CLSN2914376 Genevestigator:P93830 GermOnline:AT1G04250
Uniprot:P93830
Length = 229
Score = 222 (83.2 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 47/110 (42%), Positives = 65/110 (59%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAIT 261
FVK++MDG P RK+DL Y SY++LS A+ +F + G +++ E K +
Sbjct: 112 FVKVSMDGAPYLRKIDLRMYKSYDELSNALSNMFSSFTMGKHGGEEG-MIDFMNERKLMD 170
Query: 262 GVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
L S +Y YED +GD MLVGDVPW MFV T RLR++K S+ L+
Sbjct: 171 --LVNSWDYVPSYEDKDGDWMLVGDVPWPMFVDTCKRLRLMKGSDAIGLA 218
Score = 89 (36.4 bits), Expect = 3.1e-26, Sum P(2) = 3.1e-26
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 136 KNTAVPNSSQKRTAPAPVVGWPPIRSFRKNL 166
+ +A P K A A VVGWPP+RS+RKN+
Sbjct: 66 EKSACPKDPAKPPAKAQVVGWPPVRSYRKNV 96
>TAIR|locus:2094598 [details] [associations]
symbol:IAA7 "indole-3-acetic acid 7" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=TAS] [GO:0009611 "response to wounding" evidence=IEP]
[GO:0009753 "response to jasmonic acid stimulus" evidence=IEP]
[GO:0009630 "gravitropism" evidence=IMP] [GO:0000271
"polysaccharide biosynthetic process" evidence=RCA] [GO:0007389
"pattern specification process" evidence=RCA] [GO:0008361
"regulation of cell size" evidence=RCA] [GO:0009269 "response to
desiccation" evidence=RCA] [GO:0009409 "response to cold"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
[GO:0009737 "response to abscisic acid stimulus" evidence=RCA]
[GO:0009825 "multidimensional cell growth" evidence=RCA]
[GO:0009926 "auxin polar transport" evidence=RCA] [GO:0009932 "cell
tip growth" evidence=RCA] [GO:0010015 "root morphogenesis"
evidence=RCA] [GO:0010817 "regulation of hormone levels"
evidence=RCA] [GO:0040007 "growth" evidence=RCA] [GO:0043481
"anthocyanin accumulation in tissues in response to UV light"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA] [GO:0009414
"response to water deprivation" evidence=IMP] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0006417 GO:GO:0009734
GO:GO:0009414 GO:GO:0003700 GO:GO:0006351 GO:GO:0009630
GO:GO:0009416 EMBL:AB026655 HOGENOM:HOG000238261 eggNOG:NOG281606
KO:K14484 EMBL:U18409 EMBL:AF332395 EMBL:AY054651 EMBL:AY072461
EMBL:AY087765 IPI:IPI00517741 PIR:S58494 RefSeq:NP_188945.1
UniGene:At.22260 UniGene:At.67783 PDB:2P1N PDB:2P1O PDB:2P1Q
PDBsum:2P1N PDBsum:2P1O PDBsum:2P1Q DIP:DIP-33345N IntAct:Q38825
STRING:Q38825 PaxDb:Q38825 PRIDE:Q38825 DNASU:821879
EnsemblPlants:AT3G23050.1 GeneID:821879 KEGG:ath:AT3G23050
GeneFarm:3154 TAIR:At3g23050 InParanoid:Q38825 OMA:NESKLMN
PhylomeDB:Q38825 ProtClustDB:CLSN2684190 EvolutionaryTrace:Q38825
Genevestigator:Q38825 Uniprot:Q38825
Length = 243
Score = 288 (106.4 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 77/207 (37%), Positives = 108/207 (52%)
Query: 119 DLQSPAEKKAFL---SSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLP 175
+LQS E L S+ P + T + + S K A A VVGWPP+R++RKN+ ++
Sbjct: 47 NLQSNKEGSVDLKNVSAVPKEKTTLKDPS-KPPAKAQVVGWPPVRNYRKNMM----TQQK 101
Query: 176 ASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
S + S+ G VK++MDG P RKVDL Y SY+ LS A+ ++F
Sbjct: 102 TSSGAEEASSEKAGNFGGGAAGAG--LVKVSMDGAPYLRKVDLKMYKSYQDLSDALAKMF 159
Query: 236 RGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVST 295
+ A G+++ E K + L S EY YED +GD MLVGDVPW MFV +
Sbjct: 160 SSFTMG--NYGAQGMIDFMNESKLMN--LLNSSEYVPSYEDKDGDWMLVGDVPWEMFVES 215
Query: 296 VTRLRVLKSSEVSALS---REKFGNSR 319
RLR++K SE L+ EK+ +R
Sbjct: 216 CKRLRIMKGSEAVGLAPRAMEKYCKNR 242
>TAIR|locus:2084933 [details] [associations]
symbol:IAA16 "indoleacetic acid-induced protein 16"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006970 "response to osmotic stress"
evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0046686 "response to cadmium ion" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009536 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009733 GO:GO:0006417 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0009416 EMBL:AC011437 HOGENOM:HOG000238261
eggNOG:NOG281606 EMBL:U49072 EMBL:AF332400 EMBL:AF375420
EMBL:BT000857 EMBL:AY087195 IPI:IPI00530628 RefSeq:NP_187124.1
UniGene:At.24121 IntAct:O24407 STRING:O24407 PRIDE:O24407
DNASU:819633 EnsemblPlants:AT3G04730.1 GeneID:819633
KEGG:ath:AT3G04730 GeneFarm:3175 TAIR:At3g04730 InParanoid:O24407
OMA:FRKNVMS PhylomeDB:O24407 ProtClustDB:CLSN2914703
Genevestigator:O24407 GermOnline:AT3G04730 Uniprot:O24407
Length = 236
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 67/167 (40%), Positives = 94/167 (56%)
Query: 146 KRTAPAPVVGWPPIRSFRKN-LAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVK 204
K A A VVGWPP+RSFRKN ++G + A+E ND S + + +VK
Sbjct: 64 KPPAKAQVVGWPPVRSFRKNVMSGQKPTTGDATEG-NDKTSGSSGATSSASACATVAYVK 122
Query: 205 INMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVL 264
++MDG P RK+DL Y +Y+ LS A+ ++F G+ + E K I +L
Sbjct: 123 VSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQ--GMKDFMNESKLID-LL 179
Query: 265 DGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
+GS +Y YED +GD MLVGDVPW MFV + R+R++K SE L+
Sbjct: 180 NGS-DYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLA 225
>TAIR|locus:2020255 [details] [associations]
symbol:IAA10 "indoleacetic acid-induced protein 10"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC002411 GO:GO:0010200 EMBL:U18412
EMBL:AF332396 IPI:IPI00520254 PIR:S58496 RefSeq:NP_171906.1
UniGene:At.21582 IntAct:Q38828 PaxDb:Q38828 PRIDE:Q38828
EnsemblPlants:AT1G04100.1 GeneID:839290 KEGG:ath:AT1G04100
GeneFarm:3157 TAIR:At1g04100 eggNOG:NOG280843 HOGENOM:HOG000238261
InParanoid:Q38828 OMA:RTYRINS PhylomeDB:Q38828
ProtClustDB:CLSN2914368 Genevestigator:Q38828 GermOnline:AT1G04100
Uniprot:Q38828
Length = 261
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 67/162 (41%), Positives = 96/162 (59%)
Query: 154 VGWPPIRSFR--------KNLA--GASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFV 203
VGWPP+R++R K+LA G +S + + + V + D+ + R + V
Sbjct: 95 VGWPPLRTYRINSLVNQAKSLATEGGLSSGIQKETTKSVVVAAKNDDACFIKSSRTSMLV 154
Query: 204 KINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGV 263
K+ MDGV IGRKVDLNA DSY L +D +F + + S+ G K +E + +
Sbjct: 155 KVTMDGVIIGRKVDLNALDSYAALEKTLDLMFFQIPSPVTRSNTQGY--KTIKETCTSKL 212
Query: 264 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
LDGS EY + Y+D +GD MLVGDVPW MF+ +VTRLR++K+S
Sbjct: 213 LDGSSEYIITYQDKDGDWMLVGDVPWQMFLGSVTRLRIMKTS 254
>UNIPROTKB|Q75GK0 [details] [associations]
symbol:IAA11 "Auxin-responsive protein IAA11" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009753 GO:GO:0009611 GO:GO:0009734 GO:GO:0006355
GO:GO:0009414 GO:GO:0006351 GO:GO:0009630 GO:GO:0010102
EMBL:AC145379 EMBL:AC145780 EnsemblPlants:LOC_Os03g43400.1
KEGG:dosa:Os03t0633500-00 Gramene:Q75GK0 eggNOG:NOG281606
OMA:PELSMAF Uniprot:Q75GK0
Length = 233
Score = 192 (72.6 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 45/109 (41%), Positives = 58/109 (53%)
Query: 203 VKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITG 262
VK++MDG P RK+D+ Y SY +LS A +F + G +E K
Sbjct: 125 VKVSMDGAPYLRKIDVAMYKSYPELSMAFQNMFTSFTIGK----CGSHQQLKESNK---- 176
Query: 263 VLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
L EY YED +GD MLVGDVPW MFV + RLR++K SE L+
Sbjct: 177 -LRDDLEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLA 224
Score = 98 (39.6 bits), Expect = 4.9e-24, Sum P(2) = 4.9e-24
Identities = 24/53 (45%), Positives = 31/53 (58%)
Query: 118 ADLQSPA--EKKAFLSSAPAKN--TAVPNSSQKRTAPAPVVGWPPIRSFRKNL 166
AD + A EK + SA + TA P+ + R A VVGWPP+RSFRKN+
Sbjct: 62 ADAAAAAADEKMSMKRSASQSSVVTAEPDPDKPRAPKAQVVGWPPVRSFRKNV 114
>UNIPROTKB|Q5Z749 [details] [associations]
symbol:IAA21 "Auxin-responsive protein IAA21" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0005737
GO:GO:0009733 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351
HOGENOM:HOG000238261 eggNOG:NOG266390 EMBL:AP004784 EMBL:AK121989
RefSeq:NP_001057554.1 UniGene:Os.7687 PRIDE:Q5Z749
EnsemblPlants:LOC_Os06g22870.1 GeneID:4340939
KEGG:dosa:Os06t0335500-01 KEGG:osa:4340939 Gramene:Q5Z749
OMA:RKNTMAM ProtClustDB:CLSN2691250 Uniprot:Q5Z749
Length = 266
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 69/185 (37%), Positives = 101/185 (54%)
Query: 127 KAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSK 186
KA ++A A+ +Q A A VVGWPPIRS+RKN S PA + +D +K
Sbjct: 83 KAAAAAAEAEEEEEKKKAQAPAAKAQVVGWPPIRSYRKNTMAMSQ---PALKGKDDGEAK 139
Query: 187 TVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSS 246
+ PA G +VK++MDG P RKVDL Y +Y++LS A++++F +S+
Sbjct: 140 ---QAPAS--GCL--YVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESN 192
Query: 247 AGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
G + + + +G+ E L YED + D MLVGDVPW MF + RLR++K S+
Sbjct: 193 -GKSGRDGLSDCRLMDLKNGT-ELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSD 250
Query: 307 VSALS 311
L+
Sbjct: 251 AVGLA 255
>UNIPROTKB|Q6AT33 [details] [associations]
symbol:IAA19 "Auxin-responsive protein IAA19" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC144735
EMBL:AK061439 RefSeq:NP_001056300.1 UniGene:Os.8928
EnsemblPlants:LOC_Os05g48590.1 GeneID:4339588
KEGG:dosa:Os05t0559400-01 KEGG:osa:4339588 Gramene:Q6AT33
eggNOG:NOG268205 OMA:RKLRIMR ProtClustDB:CLSN2691691 Uniprot:Q6AT33
Length = 281
Score = 268 (99.4 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 63/176 (35%), Positives = 97/176 (55%)
Query: 147 RTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKIN 206
R A A VVGWPP+RS+RKN ASA+K +K D+ + E G +VK++
Sbjct: 122 RAAKAQVVGWPPVRSYRKNTLAASATK-----------TKGEDQGKS-EVGCC--YVKVS 167
Query: 207 MDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDG 266
MDG P RKVDL Y SYE LS A++++F + + S ++ + + D
Sbjct: 168 MDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQ 227
Query: 267 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREKFGNSRQDK 322
EY L YED + D MLVGD+PW +F ++ +LR+++ S+ + ++ + Q+K
Sbjct: 228 --EYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQTGQNK 281
>UNIPROTKB|Q7Y1H8 [details] [associations]
symbol:IAA14 "Auxin-responsive protein IAA14" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AC093713
EMBL:AK059619 KEGG:dosa:Os03t0797800-01 Gramene:Q7Y1H8
eggNOG:NOG284674 Uniprot:Q7Y1H8
Length = 195
Score = 145 (56.1 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 40/109 (36%), Positives = 57/109 (52%)
Query: 153 VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGRKNP----FVKINMD 208
VVGWPP+ S+R++ +S+S A+ K E + GRKN +VK++MD
Sbjct: 65 VVGWPPVGSYRRSTFQSSSSSTAAAAK-----GKGGGET---DQGRKNKGGGLYVKVSMD 116
Query: 209 GVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEE 257
G P RKVDL Y Y +L A+D LF G +A +SA E++
Sbjct: 117 GAPYLRKVDLRMYGGYRELRDALDALF-GCFSADASASAAHFAVAYEDK 164
Score = 121 (47.7 bits), Expect = 1.2e-20, Sum P(2) = 1.2e-20
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 267 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
+ + + YED +GD ML GDVPW MF+S+ +LR+++ SE
Sbjct: 154 AAHFAVAYEDKDGDLMLAGDVPWDMFISSCKKLRIMRGSE 193
>UNIPROTKB|Q6ZL57 [details] [associations]
symbol:IAA24 "Auxin-responsive protein IAA24" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:AP003835
EMBL:AK103483 RefSeq:NP_001059051.1 UniGene:Os.8622
EnsemblPlants:LOC_Os07g08460.1 GeneID:4342573
KEGG:dosa:Os07t0182400-01 KEGG:osa:4342573 Gramene:Q6ZL57
eggNOG:NOG284204 OMA:QHAIAYE ProtClustDB:CLSN2694400 Uniprot:Q6ZL57
Length = 219
Score = 144 (55.7 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 40/134 (29%), Positives = 61/134 (45%)
Query: 110 SQPCCTKVADLQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAP--VVGWPPIRSFRKNLA 167
+ P + + E ++S + A APA VVGWPP+R++R+N
Sbjct: 44 ADPAAKRSLGAKRSLESTDSMASGTGTSAAGDEHDDDTAAPAKAQVVGWPPVRAYRRNTF 103
Query: 168 GASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKL 227
+A+ A++ K DEK + +VK++MDG P RKVDL Y +L
Sbjct: 104 HQAAAAAAATK-------KGGDEKQKQQQQGGGLYVKVSMDGAPYLRKVDLKMCKGYREL 156
Query: 228 SAAVDELFRGLLAA 241
A+D LF +A
Sbjct: 157 REALDLLFTKCFSA 170
Score = 138 (53.6 bits), Expect = 1.3e-19, Sum P(2) = 1.3e-19
Identities = 24/44 (54%), Positives = 33/44 (75%)
Query: 265 DG--SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
DG G++ + YED +GD MLVGDVPW MF+S+ +LR++K SE
Sbjct: 174 DGCSDGQFAIAYEDKDGDLMLVGDVPWEMFISSCKKLRIMKGSE 217
>TAIR|locus:2034200 [details] [associations]
symbol:IAA15 "indole-3-acetic acid inducible 15"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC018848 HOGENOM:HOG000238261
EMBL:AJ441300 IPI:IPI00525123 PIR:F96835 PIR:S58502
RefSeq:NP_178155.1 UniGene:At.33908 IntAct:Q9C966
EnsemblPlants:AT1G80390.1 GeneID:844379 KEGG:ath:AT1G80390
GeneFarm:3170 TAIR:At1g80390 eggNOG:NOG283386 InParanoid:Q9C966
OMA:FTALENM PhylomeDB:Q9C966 ProtClustDB:CLSN2914430
Genevestigator:Q9C966 Uniprot:Q9C966
Length = 179
Score = 131 (51.2 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 264 LDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 310
L+ GE+ YED +GD MLVGDVPW MFV + R+R++K+ + L
Sbjct: 133 LERKGEFVATYEDKDGDLMLVGDVPWMMFVESCKRMRLMKTGDAIGL 179
Score = 92 (37.4 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 199 KNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQR 243
+ +VK+ +DG RKVDL YD Y +L A++ +F+G++ R
Sbjct: 85 RRKYVKVALDGAAYLRKVDLGMYDCYGQLFTALENMFQGIITICR 129
Score = 48 (22.0 bits), Expect = 1.3e-19, Sum P(3) = 1.3e-19
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 153 VVGWPPIRSFRKNL 166
+VGWPP+ + RK +
Sbjct: 71 LVGWPPVATARKTV 84
>TAIR|locus:2129900 [details] [associations]
symbol:IAA14 "indole-3-acetic acid inducible 14"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0010102
"lateral root morphogenesis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0009733 "response to auxin stimulus" evidence=RCA;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0009741 "response
to brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0048527 "lateral root
development" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009536
GO:GO:0045892 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
GO:GO:0009416 EMBL:Z97336 EMBL:AL161539 GO:GO:0010102
HOGENOM:HOG000238261 eggNOG:NOG281606 EMBL:AF334718 EMBL:U18416
IPI:IPI00523753 PIR:C85159 PIR:H71407 PIR:S58501 RefSeq:NP_193191.2
UniGene:At.10798 IntAct:Q38832 STRING:Q38832
EnsemblPlants:AT4G14550.1 GeneID:827102 KEGG:ath:AT4G14550
GeneFarm:3165 TAIR:At4g14550 InParanoid:Q38832 OMA:GEAEEAM
PhylomeDB:Q38832 ProtClustDB:CLSN2915039 Genevestigator:Q38832
GermOnline:AT4G14550 Uniprot:Q38832
Length = 228
Score = 230 (86.0 bits), Expect = 3.1e-19, P = 3.1e-19
Identities = 54/119 (45%), Positives = 69/119 (57%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAIT 261
FVK++MDG P RKVDL Y SY+ LS A+ ++F A G+++ E K +
Sbjct: 112 FVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFSSFTMGSY--GAQGMIDFMNESKVMD 169
Query: 262 GVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS---REKFGN 317
L S EY YED +GD MLVGDVPW MFV + RLR++K SE L+ EKF N
Sbjct: 170 --LLNSSEYVPSYEDKDGDWMLVGDVPWPMFVESCKRLRIMKGSEAIGLAPRAMEKFKN 226
Score = 153 (58.9 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 47/144 (32%), Positives = 72/144 (50%)
Query: 119 DLQSPAEKKAFLSS--APAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPA 176
+LQS + L++ AP + T + + S K A A VVGWPP+R++RKN+ A
Sbjct: 42 NLQSNKQGHVDLNTNGAPKEKTFLKDPS-KPPAKAQVVGWPPVRNYRKNVM--------A 92
Query: 177 SESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFR 236
++ + E+ G FVK++MDG P RKVDL Y SY+ LS A+ ++F
Sbjct: 93 NQKSGEA------EEAMSSGGGTVAFVKVSMDGAPYLRKVDLKMYTSYKDLSDALAKMFS 146
Query: 237 GLLAAQRDSSAGGIVNKQEEEKAI 260
A G+++ E K +
Sbjct: 147 SFTMGSY--GAQGMIDFMNESKVM 168
>TAIR|locus:2169955 [details] [associations]
symbol:IAA9 "indole-3-acetic acid inducible 9"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0009734 "auxin mediated signaling
pathway" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009616 "virus induced gene
silencing" evidence=RCA] [GO:0010050 "vegetative phase change"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AB010075 EMBL:AL021684 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000238261 OMA:CKKLKIM
EMBL:U18411 EMBL:AF334715 EMBL:AY087089 IPI:IPI00545394 PIR:T05902
RefSeq:NP_851275.1 UniGene:At.20107 IntAct:Q38827 STRING:Q38827
PRIDE:Q38827 EnsemblPlants:AT5G65670.1 GeneID:836693
KEGG:ath:AT5G65670 GeneFarm:3156 TAIR:At5g65670 eggNOG:NOG294213
InParanoid:Q38827 PhylomeDB:Q38827 ProtClustDB:CLSN2683754
Genevestigator:Q38827 Uniprot:Q38827
Length = 338
Score = 227 (85.0 bits), Expect = 6.5e-19, P = 6.5e-19
Identities = 49/126 (38%), Positives = 73/126 (57%)
Query: 186 KTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDS 245
K DE PG FVK++MDG P RKVDL +Y +Y +LS+A++++F Q S
Sbjct: 203 KNSDEVDGR-PGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGS 261
Query: 246 SAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
+ + E K + +L+G +Y L YED +GD MLVGDVPW MF+ +L+++K
Sbjct: 262 NGAAGKDMLSETK-LKDLLNGK-DYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGC 319
Query: 306 EVSALS 311
+ L+
Sbjct: 320 DAIGLA 325
Score = 170 (64.9 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 48/151 (31%), Positives = 74/151 (49%)
Query: 116 KVADLQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLP 175
+ A QS +K + +++ NSS A A +VGWPP+RS+RKN +
Sbjct: 147 EAAATQSVTKKDVPQNIPKGQSSTTNNSSSPPAAKAQIVGWPPVRSYRKNTLATTCKN-- 204
Query: 176 ASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
S VD +P G FVK++MDG P RKVDL +Y +Y +LS+A++++F
Sbjct: 205 ---------SDEVDGRP----GSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMF 251
Query: 236 RGLLAAQRDSSAGGIVNKQEEEKAITGVLDG 266
Q S+ + E K + +L+G
Sbjct: 252 TTFTLGQCGSNGAAGKDMLSETK-LKDLLNG 281
>UNIPROTKB|Q5VRD1 [details] [associations]
symbol:IAA1 "Auxin-responsive protein IAA1" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2691128 EMBL:AP002524 EMBL:AP002903 EMBL:AK109373
RefSeq:NP_001042192.1 UniGene:Os.9069
EnsemblPlants:LOC_Os01g08320.1 GeneID:4323871
KEGG:dosa:Os01t0178500-02 Gramene:Q5VRD1 eggNOG:NOG252529
OMA:FADDERK Uniprot:Q5VRD1
Length = 199
Score = 219 (82.2 bits), Expect = 4.6e-18, P = 4.6e-18
Identities = 61/177 (34%), Positives = 93/177 (52%)
Query: 139 AVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPAHEPGR 198
A P+ +KR++P+ S + A S+ A+++P ++ V P R
Sbjct: 37 AAPDPDRKRSSPSS--------SDAADAADNSSPLAAAADAPPAPKARVVGWPPVRS-FR 87
Query: 199 KNP----FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQ 254
KN FVK+ +DG P RKVDL AY Y++L A+ + F ++ +
Sbjct: 88 KNALAAKFVKVAVDGAPYLRKVDLEAYSGYDQLLRALQDKFFSHFTIRKFA--------- 138
Query: 255 EEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
++E+ + ++G+ EY YED +GD MLVGDVPW MFV T RLR++KSSE L+
Sbjct: 139 DDERKLVDAVNGT-EYVPTYEDKDGDWMLVGDVPWKMFVETCQRLRLMKSSEAVNLA 194
>TAIR|locus:2090141 [details] [associations]
symbol:IAA19 "indole-3-acetic acid inducible 19"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009630 "gravitropism"
evidence=NAS] [GO:0009638 "phototropism" evidence=NAS] [GO:0009733
"response to auxin stimulus" evidence=RCA;NAS;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0080086 "stamen filament development" evidence=IMP] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AB022218 EMBL:AC024081
HOGENOM:HOG000238261 KO:K14484 EMBL:AY088753 EMBL:U49075
IPI:IPI00522744 RefSeq:NP_188173.1 UniGene:At.10479 IntAct:O24409
STRING:O24409 EnsemblPlants:AT3G15540.1 GeneID:820793
KEGG:ath:AT3G15540 GeneFarm:3183 TAIR:At3g15540 eggNOG:NOG325225
InParanoid:O24409 OMA:NCEYVTI PhylomeDB:O24409
ProtClustDB:CLSN2679755 Genevestigator:O24409 GermOnline:AT3G15540
GO:GO:0080086 Uniprot:O24409
Length = 197
Score = 130 (50.8 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 265 DGSG-EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREKFG 316
DG EY +YED +GD ML GDVPW MF+ + RLR++K S+ + + G
Sbjct: 142 DGDNCEYVTIYEDKDGDWMLAGDVPWGMFLESCKRLRIMKRSDATGFGLQPRG 194
Score = 100 (40.3 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF--RGLLAAQRD 244
+VK++MDGVP RK+DL + Y+ L+ A+D+LF RG+ A +D
Sbjct: 98 YVKVSMDGVPYLRKMDLGSSQGYDDLAFALDKLFGFRGIGVALKD 142
Score = 61 (26.5 bits), Expect = 7.1e-18, Sum P(3) = 7.1e-18
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 149 APAPVVGWPPIRSFRKNLAGASAS 172
A + VVGWPP+ S+RK + AS
Sbjct: 67 AKSQVVGWPPVCSYRKKNSCKEAS 90
>UNIPROTKB|Q6AT10 [details] [associations]
symbol:IAA15 "Auxin-responsive protein IAA15" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC144738 EMBL:AK061796 RefSeq:NP_001054800.1 UniGene:Os.4822
EnsemblPlants:LOC_Os05g08570.2 GeneID:4337971
KEGG:dosa:Os05t0178600-01 KEGG:osa:4337971 Gramene:Q6AT10
eggNOG:NOG312815 ProtClustDB:CLSN2691128 Uniprot:Q6AT10
Length = 212
Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
Identities = 67/199 (33%), Positives = 96/199 (48%)
Query: 120 LQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASES 179
L+ P + SS+ + +++ P+ ++ A A P N G++A++ P S
Sbjct: 27 LRLPGSSSSSSSSSSSSSSSSPSEPDRKRASA--TDDDP-----DNRLGSTATESPPSPK 79
Query: 180 PNDV---PSKTVDEKP----AHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVD 232
V P + + A K FVK+ +DG P RKVDL AY Y++L AA+
Sbjct: 80 ARVVGWPPVRAFRKNALAALAAASSSKAKFVKVAVDGAPYLRKVDLEAYRGYDQLLAALQ 139
Query: 233 ELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMF 292
+ F ++ G EE K + V EY YED +GD MLVGDVPW MF
Sbjct: 140 DKFFSHFTIRK---LGN-----EEMKLVDAV--SGNEYVPTYEDKDGDWMLVGDVPWKMF 189
Query: 293 VSTVTRLRVLKSSEVSALS 311
V T RLR++KSSE L+
Sbjct: 190 VETCQRLRLMKSSEAVNLA 208
>TAIR|locus:2094578 [details] [associations]
symbol:IAA2 "indole-3-acetic acid inducible 2"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AB026655 HOGENOM:HOG000238261
ProtClustDB:CLSN2681778 EMBL:L15449 EMBL:AF027157 EMBL:AF332392
IPI:IPI00527263 RefSeq:NP_188943.1 UniGene:At.23539 IntAct:P49678
STRING:P49678 EnsemblPlants:AT3G23030.1 GeneID:821877
KEGG:ath:AT3G23030 GeneFarm:3142 TAIR:At3g23030 eggNOG:NOG239673
InParanoid:P49678 OMA:CEREGYK PhylomeDB:P49678
Genevestigator:P49678 GermOnline:AT3G23030 Uniprot:P49678
Length = 174
Score = 131 (51.2 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 26/45 (57%), Positives = 32/45 (71%)
Query: 266 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 310
GSG + YED +GD MLVGDVPW MF S+ RLR++K S+ AL
Sbjct: 127 GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCKRLRIMKGSDAPAL 170
Score = 105 (42.0 bits), Expect = 2.4e-17, Sum P(2) = 2.4e-17
Identities = 28/88 (31%), Positives = 47/88 (53%)
Query: 178 ESPNDVPSKT-VDEKPAHEPGRKN----PFVKINMDGVPIGRKVDLNAYDSYEKLSAAVD 232
E + P+KT + P RKN +VK++MDG P RK+DL Y +Y +L A++
Sbjct: 50 EEESTPPTKTQIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALE 109
Query: 233 ELFRGLLA--AQRDSSAG-GIVNKQEEE 257
+F+ ++ +R+ G G V E++
Sbjct: 110 NMFKVMIGEYCEREGYKGSGFVPTYEDK 137
Score = 72 (30.4 bits), Expect = 6.3e-14, Sum P(2) = 6.3e-14
Identities = 20/62 (32%), Positives = 28/62 (45%)
Query: 145 QKRTAPAP--VVGWPPIRSFRKNLAGASASKLPASESP--NDVPSKTVDEKPAHEPGRKN 200
++ T P +VGWPP+RS RKN S K+ +P + KT P +N
Sbjct: 51 EESTPPTKTQIVGWPPVRSSRKNNNSVSYVKVSMDGAPYLRKIDLKTYKNYPELLKALEN 110
Query: 201 PF 202
F
Sbjct: 111 MF 112
>TAIR|locus:2170862 [details] [associations]
symbol:ATAUX2-11 "AT5G43700" species:3702 "Arabidopsis
thaliana" [GO:0005622 "intracellular" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=ISS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;ISS;RCA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0007020
"microtubule nucleation" evidence=RCA] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] [GO:0003677 "DNA binding"
evidence=ISS] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009536 GO:GO:0009733 GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AB026651
HOGENOM:HOG000238261 ProtClustDB:CLSN2681778 UniGene:At.47260
EMBL:X53435 EMBL:L15450 EMBL:BT005853 IPI:IPI00523552 PIR:S12243
RefSeq:NP_199183.1 IntAct:P33077 STRING:P33077
EnsemblPlants:AT5G43700.1 GeneID:834390 KEGG:ath:AT5G43700
GeneFarm:3150 TAIR:At5g43700 eggNOG:NOG253406 InParanoid:P33077
OMA:KVYKSYP PhylomeDB:P33077 Genevestigator:P33077
GermOnline:AT5G43700 Uniprot:P33077
Length = 186
Score = 138 (53.6 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 266 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 310
GS ++ YED +GD MLVGDVPW MFVS+ RLR++K SEV L
Sbjct: 138 GS-DFVPTYEDKDGDWMLVGDVPWEMFVSSCKRLRIMKGSEVKGL 181
Score = 95 (38.5 bits), Expect = 4.0e-17, Sum P(2) = 4.0e-17
Identities = 18/49 (36%), Positives = 30/49 (61%)
Query: 188 VDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFR 236
V K + G+ N +VK++MDG P RK+DL Y Y +L +++ +F+
Sbjct: 77 VQTKKSESEGQGN-YVKVSMDGAPYLRKIDLTMYKQYPELMKSLENMFK 124
Score = 81 (33.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 21/67 (31%), Positives = 31/67 (46%)
Query: 127 KAFLSSAPAKNTAVPNSSQKRTAP-APVVGWPPIRSFRKNLAGASASKLPASESPNDVPS 185
K L A K ++ + P A +VGWPP+RS+RKN S+ SE +
Sbjct: 36 KRVLPEATEKEIESTGKTETASPPKAQIVGWPPVRSYRKNNVQTKKSE---SEGQGNYVK 92
Query: 186 KTVDEKP 192
++D P
Sbjct: 93 VSMDGAP 99
>UNIPROTKB|Q75GB1 [details] [associations]
symbol:IAA17 "Auxin-responsive protein IAA17" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145396 EMBL:AC145477 EMBL:AK106192
EnsemblPlants:LOC_Os05g14180.1 KEGG:dosa:Os05t0230700-01
Gramene:Q75GB1 eggNOG:NOG266390 OMA:CKKLKIM Uniprot:Q75GB1
Length = 257
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 51/134 (38%), Positives = 73/134 (54%)
Query: 186 KTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDS 245
K+ E + G+ +VK++MDG P RKVDL Y +Y+ LS A++++F G +D
Sbjct: 137 KSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTG-KD- 194
Query: 246 SAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
G+ E K GEY L YED +GD MLVGDVPW MF ++ RLR++K S
Sbjct: 195 ---GL---SESRK--------DGEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGS 240
Query: 306 EVSALSREKFGNSR 319
+ L+ S+
Sbjct: 241 DAIGLAPRAVDKSK 254
Score = 155 (59.6 bits), Expect = 3.1e-09, P = 3.1e-09
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 133 APAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKP 192
A ++ V + Q A A VVGWPPIRS+RKN + K S D +K
Sbjct: 97 AEEEDKKVAAAPQAPAAKAQVVGWPPIRSYRKNTMATNQLK----SSKEDAEAKQ----- 147
Query: 193 AHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRG 237
G+ +VK++MDG P RKVDL Y +Y+ LS A++++F G
Sbjct: 148 ----GQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIG 188
>UNIPROTKB|P49679 [details] [associations]
symbol:IAA4/5 "Auxin-induced protein IAA4" species:3888
"Pisum sativum" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 EMBL:X68215
EMBL:X68216 PIR:S39075 IntAct:P49679 Uniprot:P49679
Length = 189
Score = 138 (53.6 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEE 257
RKN + ++ G+ + KV ++ K+ V + LL A ++ + + E
Sbjct: 81 RKNSLHEADVGGIFV--KVSMDGAPYLRKIDLRVYGGYSELLKAL-ETMFKLTIGEYSER 137
Query: 258 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 310
+ G EY YED +GD MLVGDVPW MFV++ RLR++K +E L
Sbjct: 138 EGYKG-----SEYAPTYEDKDGDWMLVGDVPWDMFVTSCKRLRIMKGTEAKGL 185
Score = 89 (36.4 bits), Expect = 1.7e-16, Sum P(2) = 1.7e-16
Identities = 19/46 (41%), Positives = 25/46 (54%)
Query: 120 LQSPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFRKN 165
L +E+ +S V +SS A A +VGWPPIRS+RKN
Sbjct: 38 LPQTSEESVSISKVTNDEHIVESSSAAPPAKAKIVGWPPIRSYRKN 83
>TAIR|locus:2129910 [details] [associations]
symbol:IAA1 "indole-3-acetic acid inducible" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009733 "response to auxin stimulus"
evidence=IEP;RCA] [GO:0009741 "response to brassinosteroid
stimulus" evidence=RCA] [GO:0010583 "response to cyclopentenone"
evidence=RCA] [GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 EMBL:Z97336
EMBL:AL161539 HOGENOM:HOG000238261 EMBL:L15448 EMBL:AY133714
IPI:IPI00539077 PIR:A71408 RefSeq:NP_193192.1 UniGene:At.43941
IntAct:P49677 STRING:P49677 DNASU:827103 EnsemblPlants:AT4G14560.1
GeneID:827103 KEGG:ath:AT4G14560 GeneFarm:3140 TAIR:At4g14560
eggNOG:NOG329801 InParanoid:P49677 OMA:CQKLRIM PhylomeDB:P49677
ProtClustDB:CLSN2681778 Genevestigator:P49677 GermOnline:AT4G14560
Uniprot:P49677
Length = 168
Score = 124 (48.7 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 266 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
GSG + YED +GD MLVGDVPW MF S+ +LR++K SE
Sbjct: 124 GSG-FVPTYEDKDGDWMLVGDVPWDMFSSSCQKLRIMKGSE 163
Score = 96 (38.9 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 28/92 (30%), Positives = 48/92 (52%)
Query: 176 ASESPNDVPSKT-VDEKPAHEPGRKN------PFVKINMDGVPIGRKVDLNAYDSYEKLS 228
++E P+KT + P RKN +VK++MDG P RK+DL Y +Y +L
Sbjct: 43 STEESAPPPAKTQIVGWPPVRSNRKNNNNKNVSYVKVSMDGAPYLRKIDLKMYKNYPELL 102
Query: 229 AAVDELFRGLLA--AQRDSSAG-GIVNKQEEE 257
A++ +F+ + ++R+ G G V E++
Sbjct: 103 KALENMFKFTVGEYSEREGYKGSGFVPTYEDK 134
Score = 86 (35.3 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 125 EKKAFLSSAPAKNTAVPNSSQKRTAPAP----VVGWPPIRSFRKNLAGASASKLPAS 177
E++ LS + N N S + +AP P +VGWPP+RS RKN + S + S
Sbjct: 24 EQQLELSCVRSNNKRKNNDSTEESAPPPAKTQIVGWPPVRSNRKNNNNKNVSYVKVS 80
>UNIPROTKB|Q6Z5M0 [details] [associations]
symbol:IAA8 "Auxin-responsive protein IAA8" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=ISS] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000005696
eggNOG:NOG267119 EMBL:AP005113 EMBL:AK066518 EMBL:AK108275
RefSeq:NP_001047972.1 UniGene:Os.55536
EnsemblPlants:LOC_Os02g49160.1 GeneID:4330571
KEGG:dosa:Os02t0723400-02 KEGG:osa:4330571 Gramene:Q6Z5M0
Uniprot:Q6Z5M0
Length = 205
Score = 190 (71.9 bits), Expect = 5.5e-15, P = 5.5e-15
Identities = 41/109 (37%), Positives = 64/109 (58%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEE 257
R++ FVK+ M+GVPIGRK+DL D Y+ L A + +FR + ++Q
Sbjct: 101 RRSLFVKVYMEGVPIGRKLDLLPLDGYKGLVARLASMFRASITYHH-------CHRQF-- 151
Query: 258 KAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
A+ G+ + L YED EGD M+ GDVPW +F+++V RLR+ ++ +
Sbjct: 152 -AVVGMKTNKVHHVLTYEDQEGDWMMAGDVPWELFLTSVKRLRIARADD 199
>TAIR|locus:2196573 [details] [associations]
symbol:IAA5 "indole-3-acetic acid inducible 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009741 "response to
brassinosteroid stimulus" evidence=RCA] [GO:0010583 "response to
cyclopentenone" evidence=RCA] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC013453 HOGENOM:HOG000238261
EMBL:X53436 EMBL:AY150496 EMBL:U18407 IPI:IPI00531814 PIR:G86289
PIR:S12244 PIR:S58492 RefSeq:NP_173011.1 UniGene:At.28674
IntAct:P33078 STRING:P33078 EnsemblPlants:AT1G15580.1 GeneID:838128
KEGG:ath:AT1G15580 GeneFarm:3151 TAIR:At1g15580 eggNOG:NOG305053
OMA:ESECVPI PhylomeDB:P33078 ProtClustDB:CLSN2912676
Genevestigator:P33078 GermOnline:AT1G15580 Uniprot:P33078
Length = 163
Score = 113 (44.8 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 273 VYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
+YED +GD ML GDVPW MF+ + RLR++K S
Sbjct: 127 IYEDKDGDWMLAGDVPWEMFLGSCKRLRIMKRS 159
Score = 82 (33.9 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 199 KNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
K+ +VK+++DG RK+DL Y Y+ L++A+ LF
Sbjct: 73 KSSYVKVSVDGAAFLRKIDLEMYKCYQDLASALQILF 109
Score = 53 (23.7 bits), Expect = 2.9e-14, Sum P(3) = 2.9e-14
Identities = 8/12 (66%), Positives = 11/12 (91%)
Query: 153 VVGWPPIRSFRK 164
VVGWPP+ S+R+
Sbjct: 54 VVGWPPVCSYRR 65
>UNIPROTKB|Q75GK1 [details] [associations]
symbol:IAA12 "Auxin-responsive protein IAA12" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AC145379 EMBL:AK073044 RefSeq:NP_001050714.1 UniGene:Os.9945
STRING:Q75GK1 EnsemblPlants:LOC_Os03g43410.1 GeneID:4333512
KEGG:dosa:Os03t0633800-01 KEGG:osa:4333512 Gramene:Q75GK1
eggNOG:NOG272839 OMA:TCKKLRI ProtClustDB:CLSN2694101 Uniprot:Q75GK1
Length = 226
Score = 182 (69.1 bits), Expect = 5.2e-14, P = 5.2e-14
Identities = 59/180 (32%), Positives = 90/180 (50%)
Query: 149 APAPVVGWPPIRSFRKNL---AGASASKLPASESPNDVPSKTVDEKPAHEPGRKNPFVKI 205
A A VVGWPP+RS+RK+ A+ASK A+ S + + + + A P +
Sbjct: 67 AKAQVVGWPPVRSYRKSCFQQQSAAASKSKAAVSSCNNKDEPITKNAAPAPAASSA-AAA 125
Query: 206 NMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLD 265
N G + KV ++ K+ + + +R L R++ V +G D
Sbjct: 126 N-GGSLV--KVSMDGAPYLRKIDLRMYKGYREL----REALEAMFV-------CFSGAAD 171
Query: 266 GSG--EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREKFGNSRQDKI 323
G+ E+ + Y+D +GD MLVGDVP+ MF ST +LR++K SE + L G+ RQ KI
Sbjct: 172 GANPSEFAITYQDKDGDLMLVGDVPFDMFTSTCKKLRIMKRSEATGL-----GSPRQMKI 226
>TAIR|locus:2041324 [details] [associations]
symbol:IAA20 "indole-3-acetic acid inducible 20"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0009647 "skotomorphogenesis" evidence=IMP]
[GO:0010588 "cotyledon vascular tissue pattern formation"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
EMBL:AC004411 GO:GO:0009630 GO:GO:0009647 GO:GO:0010588
EMBL:AK117233 EMBL:AF348576 EMBL:U49076 IPI:IPI00547197 PIR:T02188
RefSeq:NP_182222.1 UniGene:At.10480 IntAct:O24410 STRING:O24410
DNASU:819313 EnsemblPlants:AT2G46990.1 GeneID:819313
KEGG:ath:AT2G46990 GeneFarm:3236 TAIR:At2g46990 eggNOG:NOG254610
HOGENOM:HOG000005696 InParanoid:O24410 OMA:KISRANY PhylomeDB:O24410
ProtClustDB:CLSN2683572 Genevestigator:O24410 GermOnline:AT2G46990
Uniprot:O24410
Length = 175
Score = 117 (46.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 270 YTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSS 305
+ L Y D EGD M+VGDVPW MF+STV RL++ +++
Sbjct: 137 HVLTYADKEGDWMMVGDVPWEMFLSTVRRLKISRAN 172
Score = 104 (41.7 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 175 PASESPNDVPSKTVDEKPAHEPGRKNPF-VKINMDGVPIGRKVDLNAYDSYEKLSAAVDE 233
PA E V + V+E+ +E F VK+NM+GVPIGRK+DL + + Y L +D
Sbjct: 60 PAVEDAEYVAA--VEEEEENECNSVGSFYVKVNMEGVPIGRKIDLMSLNGYRDLIRTLDF 117
Query: 234 LFRG-LLAAQRD 244
+F +L A+ +
Sbjct: 118 MFNASILWAEEE 129
>TAIR|locus:2018379 [details] [associations]
symbol:SHY2 "SHORT HYPOCOTYL 2" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0046983 "protein dimerization activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009741 "response to brassinosteroid stimulus" evidence=RCA]
[GO:0048527 "lateral root development" evidence=RCA]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0006417 GO:GO:0009734 GO:GO:0003700 GO:GO:0006351
EMBL:AC000104 HOGENOM:HOG000238261 KO:K14484
ProtClustDB:CLSN2681778 EMBL:U18406 EMBL:AF332393 EMBL:AY064007
IPI:IPI00519738 PIR:S58491 RefSeq:NP_171920.1 UniGene:At.20801
DIP:DIP-31741N IntAct:Q38822 STRING:Q38822 ProMEX:Q38822
DNASU:839570 EnsemblPlants:AT1G04240.1 GeneID:839570
KEGG:ath:AT1G04240 GeneFarm:3143 TAIR:At1g04240 eggNOG:NOG275456
InParanoid:Q38822 OMA:KNESEHE PhylomeDB:Q38822
Genevestigator:Q38822 GermOnline:AT1G04240 Uniprot:Q38822
Length = 189
Score = 131 (51.2 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 266 GSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSAL 310
GS ++ YED +GD ML+GDVPW MF+ T RLR++K SE L
Sbjct: 142 GS-DFVPTYEDKDGDWMLIGDVPWEMFICTCKRLRIMKGSEAKGL 185
Score = 95 (38.5 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 26/80 (32%), Positives = 44/80 (55%)
Query: 181 NDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLA 240
N++ SK + + HE G+ +VK++MDG P RK+DL+ Y Y +L A++ +F+ +
Sbjct: 77 NNIQSKKNESE--HE-GQ-GIYVKVSMDGAPYLRKIDLSCYKGYSELLKALEVMFKFSVG 132
Query: 241 A--QRDSSAGGIVNKQEEEK 258
+RD G E+K
Sbjct: 133 EYFERDGYKGSDFVPTYEDK 152
Score = 82 (33.9 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 20/43 (46%), Positives = 28/43 (65%)
Query: 127 KAFLSSAPAKNTAVPNSSQK-RTAP---APVVGWPPIRSFRKN 165
K LS+ K + +SS+K T+P A +VGWPP+RS+RKN
Sbjct: 37 KRVLSTDTEKE--IESSSRKTETSPPRKAQIVGWPPVRSYRKN 77
>TAIR|locus:2098023 [details] [associations]
symbol:IAA30 "indole-3-acetic acid inducible 30"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;RCA;TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0010262 "somatic embryogenesis" evidence=IMP] [GO:0010583
"response to cyclopentenone" evidence=RCA] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 GO:GO:0048364 GO:GO:0009630
GO:GO:0010262 EMBL:AL138651 PIR:T48002 HOGENOM:HOG000005696
ProtClustDB:CLSN2683572 EMBL:AY669801 IPI:IPI00529772
RefSeq:NP_191769.1 UniGene:At.50305 IntAct:Q9M1R4 STRING:Q9M1R4
EnsemblPlants:AT3G62100.1 GeneID:825383 KEGG:ath:AT3G62100
GeneFarm:3237 TAIR:At3g62100 eggNOG:NOG324376 InParanoid:Q9M1R4
OMA:EMMIMEE PhylomeDB:Q9M1R4 Genevestigator:Q9M1R4
GermOnline:AT3G62100 Uniprot:Q9M1R4
Length = 172
Score = 112 (44.5 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 270 YTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKS 304
+ L Y D EGD M+VGDVPW MF+S+V RL++ ++
Sbjct: 135 HVLTYADKEGDWMMVGDVPWEMFLSSVRRLKISRA 169
Score = 99 (39.9 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRG-LLAAQRD 244
+VK+NM+GVPIGRK+DL + + Y L +D +F +L A+ +
Sbjct: 84 YVKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEE 127
>UNIPROTKB|Q652A1 [details] [associations]
symbol:IAA26 "Auxin-responsive protein IAA26" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AP005681 EMBL:AK111128 RefSeq:NP_001063732.1 UniGene:Os.57199
EnsemblPlants:LOC_Os09g35870.1 GeneID:4347643
KEGG:dosa:Os09t0527700-01 KEGG:osa:4347643 Gramene:Q652A1
eggNOG:NOG296772 OMA:WEHAVVY ProtClustDB:CLSN2697868 Uniprot:Q652A1
Length = 140
Score = 152 (58.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 29/52 (55%), Positives = 39/52 (75%)
Query: 262 GVLDGSGEY--TLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
G++DG GE+ +VYED +GD MLVGDVPW MFVS+ R+RV+++ E LS
Sbjct: 86 GLMDGYGEWEHAVVYEDGDGDWMLVGDVPWEMFVSSCKRMRVMRACEARGLS 137
>UNIPROTKB|Q6K846 [details] [associations]
symbol:IAA9 "Auxin-responsive protein IAA9" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
ProtClustDB:CLSN2695987 EMBL:AC069158 EMBL:AP004240 EMBL:AK073365
RefSeq:NP_001048437.1 UniGene:Os.23256
EnsemblPlants:LOC_Os02g56120.1 EnsemblPlants:LOC_Os02g56120.2
GeneID:4331061 KEGG:dosa:Os02t0805100-01 KEGG:osa:4331061
Gramene:Q6K846 eggNOG:NOG253641 OMA:ARSRACG Uniprot:Q6K846
Length = 182
Score = 148 (57.2 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 38/101 (37%), Positives = 57/101 (56%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAIT 261
+VK+ +G IGRKVDL + SY++L+A + +F D ++ E++ A
Sbjct: 94 YVKVKKEGDAIGRKVDLALHSSYDELAATLARMF-----PTND-------HQGEKKMAND 141
Query: 262 GVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVL 302
D +G + YED +GD MLVGDVPW F +V RL++L
Sbjct: 142 DHGDAAGP-VVTYEDGDGDWMLVGDVPWDDFARSVKRLKIL 181
>TAIR|locus:2011461 [details] [associations]
symbol:IAA6 "indole-3-acetic acid 6" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=IEP;IMP] [GO:0009704 "de-etiolation"
evidence=IMP] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005634 GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 EMBL:AC019018 GO:GO:0009704 HOGENOM:HOG000238261
KO:K14484 ProtClustDB:CLSN2679755 EMBL:U18408 EMBL:AF336915
EMBL:AY085353 IPI:IPI00524882 PIR:E96569 PIR:S58493
RefSeq:NP_175692.1 UniGene:At.10795 IntAct:Q38824 STRING:Q38824
EnsemblPlants:AT1G52830.1 GeneID:841717 KEGG:ath:AT1G52830
GeneFarm:3152 TAIR:At1g52830 eggNOG:NOG305797 InParanoid:Q38824
OMA:MFKESCK PhylomeDB:Q38824 Genevestigator:Q38824
GermOnline:AT1G52830 Uniprot:Q38824
Length = 189
Score = 122 (48.0 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 269 EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREK 314
EY ++YED + D MLVGDVPW MF + RLR++K S+ + ++
Sbjct: 143 EYIIIYEDKDRDWMLVGDVPWQMFKESCKRLRIVKRSDATGFGLQQ 188
Score = 89 (36.4 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 21/71 (29%), Positives = 39/71 (54%)
Query: 190 EKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFR--GLLAAQRDSSA 247
+K E + +VK++MDGVP RK+DL + +SY L ++ LF G+ A+
Sbjct: 83 KKNNEEASKAIGYVKVSMDGVPYMRKIDLGSSNSYINLVTVLENLFGCLGIGVAKEGKKC 142
Query: 248 GGIVNKQEEEK 258
I+ +++++
Sbjct: 143 EYIIIYEDKDR 153
Score = 59 (25.8 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 131 SSAPAKN-TAVPNSSQKRTAP---APVVGWPPIRSFRKNLAGASASK 173
S+ +N +V +S + + P + VGWPP+ S+R+ ASK
Sbjct: 45 SALDTENENSVVSSVEDESLPVVKSQAVGWPPVCSYRRKKNNEEASK 91
>UNIPROTKB|Q5NB25 [details] [associations]
symbol:IAA3 "Auxin-responsive protein IAA3" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
eggNOG:NOG266390 EMBL:AP001550 EMBL:AP001859 EMBL:AK104654
RefSeq:NP_001042495.1 UniGene:Os.12733
EnsemblPlants:LOC_Os01g13030.1 EnsemblPlants:LOC_Os01g13030.2
GeneID:4325890 KEGG:dosa:Os01t0231000-01 KEGG:osa:4325890
Gramene:Q5NB25 OMA:CHIVFRS Uniprot:Q5NB25
Length = 263
Score = 152 (58.6 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 57/212 (26%), Positives = 84/212 (39%)
Query: 121 QSPAEKKAFLSSAPAKNTAV---PNSSQKRTAPAPVVGWPPIRSFRKNLAGASASKLPAS 177
+SP + A +++A A T + P KR P PP + K A ++ A
Sbjct: 47 ESPDRRPAAIAAAAATATTLELLPAKGAKRVFPDEAALTPPTAAAGKGKAAREGEEVGAE 106
Query: 178 ESPNDVPSKTVDEKPAHEPG-------RKNPF----VKINMDGVPI--GR-----KVDLN 219
E V + A G RKN +K N + V G+ KV ++
Sbjct: 107 EEDKKVAAPPQPAAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMD 166
Query: 220 AYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEG 279
K+ + ++ + G K+ E GEY L YED +G
Sbjct: 167 GAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAEN------QKDGEYVLTYEDKDG 220
Query: 280 DRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
D MLVGDVPW MF + RLR++K S+ L+
Sbjct: 221 DWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLA 252
>TAIR|locus:2138096 [details] [associations]
symbol:ARF9 "auxin response factor 9" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;TAS] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 HOGENOM:HOG000241141
EMBL:AF082176 EMBL:AC002343 EMBL:AL078468 EMBL:AL161560
EMBL:AF344312 EMBL:AK221865 EMBL:AK228263 IPI:IPI00519218
IPI:IPI00657180 PIR:T08917 RefSeq:NP_001031706.1 RefSeq:NP_194129.1
UniGene:At.3396 ProteinModelPortal:Q9XED8 SMR:Q9XED8 IntAct:Q9XED8
PaxDb:Q9XED8 PRIDE:Q9XED8 EnsemblPlants:AT4G23980.1 GeneID:828498
KEGG:ath:AT4G23980 GeneFarm:3373 TAIR:At4g23980 eggNOG:NOG300390
InParanoid:Q9XED8 OMA:YAQITLI PhylomeDB:Q9XED8
ProtClustDB:CLSN2685375 Genevestigator:Q9XED8 Uniprot:Q9XED8
Length = 638
Score = 103 (41.3 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 36/122 (29%), Positives = 58/122 (47%)
Query: 121 QSPAEKKAFLSSAPAKNTAVPNSSQKRTAPA-PV-VGWPPIRSF---RKNLAGASASKL- 174
++ A + F + + AVP +++TAP P+ + P + S + ++ S K
Sbjct: 448 ETTANYRLFGIDLMSSSLAVP---EEKTAPMRPINISKPTMDSHSDPKSEISKVSEEKKQ 504
Query: 175 -PASESPNDVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDE 233
PA SP +V SK + K+ M GVP+GR VDLNA Y +L +++
Sbjct: 505 EPAEGSPKEVQSKQSSSTRSR--------TKVQMQGVPVGRAVDLNALKGYNELIDDIEK 556
Query: 234 LF 235
LF
Sbjct: 557 LF 558
Score = 102 (41.0 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 260 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
I G L ++ +V+ D+EGD MLVGD PW F + V R+ + EV ++
Sbjct: 560 IKGELRSRNQWEIVFTDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMT 611
>TAIR|locus:2090527 [details] [associations]
symbol:IAA31 "indole-3-acetic acid inducible 31"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009630 "gravitropism"
evidence=IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0048367 "shoot system development" evidence=IMP]
InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009733
GO:GO:0009734 GO:GO:0003700 GO:GO:0006351 GO:GO:0048364
GO:GO:0009630 GO:GO:0022621 EMBL:AB022219 HOGENOM:HOG000005696
EMBL:AY054274 EMBL:BT000543 IPI:IPI00540266 RefSeq:NP_188387.1
UniGene:At.22356 IntAct:Q8H174 EnsemblPlants:AT3G17600.1
GeneID:821026 KEGG:ath:AT3G17600 GeneFarm:3238 TAIR:At3g17600
eggNOG:NOG267119 InParanoid:Q8H174 OMA:KITRPER PhylomeDB:Q8H174
ProtClustDB:CLSN2913488 Genevestigator:Q8H174 GermOnline:AT3G17600
Uniprot:Q8H174
Length = 158
Score = 114 (45.2 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 261 TGVLDGSGE---YTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLK 303
T ++ G+ + + L YED +GD M+VGD+PW MF+ TV RL++ +
Sbjct: 109 TSIICGNRDRKHHVLTYEDKDGDWMMVGDIPWDMFLETVRRLKITR 154
Score = 96 (38.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF-RGLLAAQRD 244
FVK+ M+GVPIGRK+DL + YE L + +F ++ RD
Sbjct: 74 FVKVYMEGVPIGRKLDLCVFSGYESLLENLSHMFDTSIICGNRD 117
Score = 47 (21.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 122 SPAEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRS-FRKNLAG 168
SP+E LS + P++S +R A WPPI+S R L G
Sbjct: 21 SPSESSVNLSLS----LTFPSTSPQREARQD---WPPIKSRLRDTLKG 61
>TAIR|locus:2116505 [details] [associations]
symbol:IAA29 "indole-3-acetic acid inducible 29"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=RCA;TAS] [GO:0010114 "response to red
light" evidence=IEP] [GO:0010218 "response to far red light"
evidence=IEP] [GO:0010583 "response to cyclopentenone"
evidence=RCA] InterPro:IPR003311 InterPro:IPR011525 Pfam:PF02309
PROSITE:PS50962 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009733 GO:GO:0009734 GO:GO:0003700
GO:GO:0006351 GO:GO:0010218 GO:GO:0010114 EMBL:AL021811
EMBL:AL161580 HOGENOM:HOG000238261 EMBL:AF380646 EMBL:AY054137
IPI:IPI00531341 PIR:T05400 RefSeq:NP_567891.1 UniGene:At.19102
IntAct:Q93WC4 STRING:Q93WC4 EnsemblPlants:AT4G32280.1 GeneID:829361
KEGG:ath:AT4G32280 GeneFarm:3189 TAIR:At4g32280 eggNOG:NOG320017
InParanoid:Q93WC4 PhylomeDB:Q93WC4 Genevestigator:Q93WC4
GermOnline:AT4G32280 Uniprot:Q93WC4
Length = 251
Score = 93 (37.8 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
R + +VK+ MDGV I RKVD+ ++SYE L+ ++ +F
Sbjct: 157 RSSMYVKVKMDGVAIARKVDIKLFNSYESLTNSLITMF 194
Score = 81 (33.6 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 270 YTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLK 303
YT ++ EGD +L GDV W +F +V R+ +++
Sbjct: 207 YTFTFQGKEGDWLLRGDVTWKIFAESVHRISIIR 240
Score = 45 (20.9 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 6/9 (66%), Positives = 9/9 (100%)
Query: 153 VVGWPPIRS 161
VVGWPP+++
Sbjct: 95 VVGWPPVKT 103
>TAIR|locus:2039124 [details] [associations]
symbol:ARF11 "auxin response factor 11" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0046983 "protein dimerization activity"
evidence=IEA] [GO:0009506 "plasmodesma" evidence=IDA]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0009506
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009734
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 EMBL:AC006526 EMBL:AC006418
HOGENOM:HOG000241141 EMBL:AY669791 EMBL:AK229757 EMBL:BX837073
EMBL:AK229924 IPI:IPI00544804 IPI:IPI00547357 IPI:IPI00656718
PIR:A84904 RefSeq:NP_001031548.1 RefSeq:NP_182176.2
RefSeq:NP_973701.1 UniGene:At.36497 ProteinModelPortal:Q9ZPY6
SMR:Q9ZPY6 PRIDE:Q9ZPY6 EnsemblPlants:AT2G46530.3 GeneID:819264
KEGG:ath:AT2G46530 GeneFarm:3388 TAIR:At2g46530 eggNOG:NOG303653
InParanoid:Q9ZPY6 OMA:MFEIEGE PhylomeDB:Q9ZPY6
ProtClustDB:CLSN2681223 ArrayExpress:Q9ZPY6 Genevestigator:Q9ZPY6
Uniprot:Q9ZPY6
Length = 622
Score = 114 (45.2 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 24/69 (34%), Positives = 39/69 (56%)
Query: 250 IVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 309
++ + E+ I G L ++ +V+ D+EGDRMLVGD PW+ F +L + S EV
Sbjct: 538 LIKELEKMFEIEGELSPKDKWAIVFTDDEGDRMLVGDDPWNEFCKMAKKLFIYPSDEVKK 597
Query: 310 L-SREKFGN 317
+ S+ G+
Sbjct: 598 MRSKSLLGD 606
Score = 79 (32.9 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 26/114 (22%), Positives = 46/114 (40%)
Query: 124 AEKKAFLSSAPAKNTAVPNSSQKRTAPAPVVGWPPIRSFR--KNLAGASASKLPASESPN 181
+ K F S K T P +S R + P + K L ++ ++
Sbjct: 434 SNKSVFSSGLQCKITEAPVTSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQ 493
Query: 182 DVPSKTVDEKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
D P+ + K + +K+ M G +GR VDL SY++L ++++F
Sbjct: 494 D-PNSSNSPKEQKQQTSTRSRIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMF 546
Score = 45 (20.9 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 15/52 (28%), Positives = 22/52 (42%)
Query: 122 SPAEKKAFLSSAPAKNTAVPNSSQKRTAP-APVVGWPPIRSFRKNLAGASAS 172
SP E + F SA S KR+ P + + G P SF + + + S
Sbjct: 366 SPWEIEPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFLSSFSQSHES 417
>TAIR|locus:2038701 [details] [associations]
symbol:IAA32 "indole-3-acetic acid inducible 32"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=IMP] [GO:0009555 "pollen
development" evidence=IMP] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 EMBL:CP002685
GO:GO:0009733 GO:GO:0009734 GO:GO:0009555 GO:GO:0003700
GO:GO:0006351 GO:GO:0009793 EMBL:AC006200 EMBL:AJ458329
IPI:IPI00519467 PIR:G84421 RefSeq:NP_973390.1 UniGene:At.42513
IntAct:Q8RYC6 PRIDE:Q8RYC6 EnsemblPlants:AT2G01200.2 GeneID:814648
KEGG:ath:AT2G01200 GeneFarm:3190 TAIR:At2g01200 eggNOG:NOG327040
InParanoid:Q8RYC6 OMA:DVPWKEF PhylomeDB:Q8RYC6
ProtClustDB:CLSN2681132 Genevestigator:Q8RYC6 Uniprot:Q8RYC6
Length = 191
Score = 98 (39.6 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 269 EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
E++LVY D EG VGDVPW FV +V R+R+ + ++
Sbjct: 149 EFSLVYRDREGIWRNVGDVPWKEFVESVDRMRIARRND 186
Score = 74 (31.1 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 199 KNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
K +VK+N+DG+ +GRKV L +Y L+ ++++F
Sbjct: 97 KYAYVKVNLDGLVVGRKVCLVDQGAYATLALQLNDMF 133
>TAIR|locus:2196184 [details] [associations]
symbol:IAA34 "indole-3-acetic acid inducible 34"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0046983 "protein dimerization
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0009733 "response
to auxin stimulus" evidence=TAS] InterPro:IPR003311
InterPro:IPR011525 Pfam:PF02309 PROSITE:PS50962 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733 GO:GO:0009734
GO:GO:0003700 GO:GO:0006351 EMBL:AC012189 EMBL:AJ458327
EMBL:AF334713 IPI:IPI00539053 PIR:B86284 RefSeq:NP_172959.2
UniGene:At.17166 IntAct:Q9C5X0 DNASU:838070
EnsemblPlants:AT1G15050.1 GeneID:838070 KEGG:ath:AT1G15050
GeneFarm:3196 TAIR:At1g15050 eggNOG:NOG305135 HOGENOM:HOG000090886
OMA:RITRRND PhylomeDB:Q9C5X0 ProtClustDB:CLSN2915091
ArrayExpress:Q9C5X0 Genevestigator:Q9C5X0 GermOnline:AT1G15050
Uniprot:Q9C5X0
Length = 185
Score = 94 (38.1 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 269 EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSE 306
E+ LVY D EG GDVPW+ F+ +V RLR+ + ++
Sbjct: 143 EFCLVYRDEEGLWRNAGDVPWNEFIESVERLRITRRND 180
Score = 77 (32.2 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
RK +VK+ MDG+ +GRKV + + SY L+ ++++F
Sbjct: 90 RKWGYVKVTMDGLVVGRKVCVLDHGSYSTLAHQLEDMF 127
>UNIPROTKB|Q5VRR0 [details] [associations]
symbol:IAA20 "Auxin-responsive protein IAA20" species:39947
"Oryza sativa Japonica Group" [GO:0009733 "response to auxin
stimulus" evidence=IC] InterPro:IPR003311 InterPro:IPR011525
Pfam:PF02309 PROSITE:PS50962 GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0006355 GO:GO:0006351 HOGENOM:HOG000238261
EMBL:AB023482 EMBL:AP002536 EMBL:AK102541 RefSeq:NP_001056915.2
UniGene:Os.15798 STRING:Q5VRR0 EnsemblPlants:LOC_Os06g07040.1
GeneID:4340245 KEGG:dosa:Os06t0166500-01 KEGG:osa:4340245
Gramene:Q5VRR0 eggNOG:NOG246219 OMA:KCARRRS ProtClustDB:CLSN2695987
Uniprot:Q5VRR0
Length = 183
Score = 108 (43.1 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 19/33 (57%), Positives = 23/33 (69%)
Query: 270 YTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVL 302
Y + YED EGD M VGDVPW F +V RL++L
Sbjct: 150 YAVTYEDGEGDWMQVGDVPWEAFAKSVKRLKIL 182
Score = 44 (20.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 6/16 (37%), Positives = 10/16 (62%)
Query: 153 VVGWPPIRSFRKNLAG 168
+VGWPP++ + G
Sbjct: 79 LVGWPPVKCLHRRRDG 94
>TAIR|locus:2035454 [details] [associations]
symbol:MP "MONOPTEROS" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA;ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IEP]
[GO:0009725 "response to hormone stimulus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;TAS] [GO:0009733 "response to auxin
stimulus" evidence=IEP;RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0042802 "identical protein binding" evidence=IPI]
[GO:0016020 "membrane" evidence=IDA] [GO:0009790 "embryo
development" evidence=IGI] [GO:0009908 "flower development"
evidence=IGI] [GO:0010305 "leaf vascular tissue pattern formation"
evidence=IGI] [GO:0048364 "root development" evidence=IGI]
[GO:0048507 "meristem development" evidence=IGI;RCA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IDA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=RCA] [GO:0007155 "cell adhesion" evidence=RCA] [GO:0009741
"response to brassinosteroid stimulus" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009944 "polarity specification of
adaxial/abaxial axis" evidence=RCA] [GO:0009965 "leaf
morphogenesis" evidence=RCA] [GO:0010014 "meristem initiation"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=IMP;RCA] [GO:0010073 "meristem maintenance" evidence=RCA]
[GO:0010090 "trichome morphogenesis" evidence=RCA] [GO:0016246 "RNA
interference" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048519 "negative
regulation of biological process" evidence=RCA] [GO:0048527
"lateral root development" evidence=RCA] [GO:0048765 "root hair
cell differentiation" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0009942 "longitudinal axis specification"
evidence=IMP] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0016020 GO:GO:0003700 GO:GO:0006351
GO:GO:0048364 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0044212 GO:GO:0009908 GO:GO:0048507
EMBL:AC007797 KO:K14486 EMBL:AF037228 EMBL:AF037229 EMBL:AF334716
EMBL:BT002050 EMBL:BT008805 EMBL:AB199792 EMBL:U79557 EMBL:EF598523
EMBL:EF598524 EMBL:EF598525 EMBL:EF598526 EMBL:EF598527
EMBL:EF598528 EMBL:EF598529 EMBL:EF598530 EMBL:EF598531
EMBL:EF598532 EMBL:EF598533 EMBL:EF598534 EMBL:EF598535
EMBL:EF598536 EMBL:EF598537 EMBL:EF598538 EMBL:EF598539
EMBL:EF598540 EMBL:EF598541 EMBL:EF598542 EMBL:EF598543
EMBL:EF598544 EMBL:EF598545 EMBL:EF598546 IPI:IPI00538603
PIR:G86331 PIR:T51807 RefSeq:NP_173414.1 UniGene:At.10494
UniGene:At.41731 ProteinModelPortal:P93024 SMR:P93024 IntAct:P93024
STRING:P93024 PaxDb:P93024 PRIDE:P93024 EnsemblPlants:AT1G19850.1
GeneID:838573 KEGG:ath:AT1G19850 GeneFarm:3368 TAIR:At1g19850
eggNOG:NOG291711 InParanoid:P93024 OMA:ARYNKAT PhylomeDB:P93024
ProtClustDB:CLSN2682929 Genevestigator:P93024 GermOnline:AT1G19850
GO:GO:0010305 GO:GO:0009942 Uniprot:P93024
Length = 902
Score = 105 (42.0 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 267 SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSRE 313
S + LVY D E D +LVGD PW FV V +R+L +EV +S E
Sbjct: 838 SSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMSEE 884
Score = 70 (29.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF--RGLLAAQRDS 245
R + K+ G +GR +D+ ++ YE+L +A++ +F GLL + S
Sbjct: 791 RVRTYTKVQKTG-SVGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSS 839
>TAIR|locus:2174013 [details] [associations]
symbol:ARF2 "auxin response factor 2" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0009911 "positive regulation of flower
development" evidence=IMP] [GO:0010047 "fruit dehiscence"
evidence=IMP] [GO:0010150 "leaf senescence" evidence=IMP]
[GO:0010227 "floral organ abscission" evidence=IMP] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0048481 "ovule development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0009737 "response to abscisic acid
stimulus" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0042744 "hydrogen peroxide catabolic process"
evidence=RCA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
GO:GO:0009737 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0045892 GO:GO:0008285 GO:GO:0009734 GO:GO:0043565
GO:GO:0003700 GO:GO:0006351 GO:GO:0010150 Gene3D:2.40.330.10
InterPro:IPR015300 SUPFAM:SSF101936 GO:GO:0009911 GO:GO:0010047
GO:GO:0010227 GO:GO:0048481 EMBL:AY669787 EMBL:AB016880
EMBL:AF336918 EMBL:AF378862 EMBL:BT000784 EMBL:BT001072
EMBL:AK221252 EMBL:AK221254 EMBL:AK221274 EMBL:AK221277
EMBL:AK221282 EMBL:AK221305 EMBL:U89771 EMBL:AJ441313 EMBL:AJ458328
IPI:IPI00518739 RefSeq:NP_201006.2 RefSeq:NP_851244.1
RefSeq:NP_974980.1 UniGene:At.21704 ProteinModelPortal:Q94JM3
SMR:Q94JM3 DIP:DIP-46014N IntAct:Q94JM3 STRING:Q94JM3 PaxDb:Q94JM3
PRIDE:Q94JM3 EnsemblPlants:AT5G62000.1 EnsemblPlants:AT5G62000.2
EnsemblPlants:AT5G62000.3 GeneID:836321 KEGG:ath:AT5G62000
GeneFarm:3364 TAIR:At5g62000 eggNOG:NOG255064 InParanoid:Q94JM3
OMA:HTESVEC PhylomeDB:Q94JM3 ProtClustDB:CLSN2680590
Genevestigator:Q94JM3 GermOnline:AT5G62000 Uniprot:Q94JM3
Length = 859
Score = 87 (35.7 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 269 EYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
++ +VY D E D MLVGD PW F V ++ + EV ++
Sbjct: 780 DWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMN 822
Score = 86 (35.3 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 204 KINMDGVPIGRKVDLNAYDSYEKLSAAVDELFR--G-LLAAQRD 244
K++ G+ +GR VDL+ + +YE+L A +D LF G L+A ++D
Sbjct: 737 KVHKQGIALGRSVDLSKFQNYEELVAELDRLFEFNGELMAPKKD 780
>TAIR|locus:2076765 [details] [associations]
symbol:ARF18 "auxin response factor 18" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009725 "response
to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AL132959 HOGENOM:HOG000241141 EMBL:AF334717
EMBL:AY059746 EMBL:AY070463 EMBL:AY091392 EMBL:AK229945
IPI:IPI00524053 PIR:T47975 RefSeq:NP_567119.1 UniGene:At.17167
UniGene:At.69165 ProteinModelPortal:Q9C5W9 SMR:Q9C5W9 IntAct:Q9C5W9
EnsemblPlants:AT3G61830.1 GeneID:825356 KEGG:ath:AT3G61830
GeneFarm:3414 TAIR:At3g61830 eggNOG:NOG268528 InParanoid:Q9C5W9
OMA:RISQFIV PhylomeDB:Q9C5W9 ProtClustDB:CLSN2917487
Genevestigator:Q9C5W9 GermOnline:AT3G61830 Uniprot:Q9C5W9
Length = 602
Score = 105 (42.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 22/74 (29%), Positives = 42/74 (56%)
Query: 250 IVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSA 309
++++ EE I G L ++ +V+ D+EGD ML GD PW+ F ++ + S EV
Sbjct: 516 LIDELEEMFEIQGQLLARDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDEVKK 575
Query: 310 LSRE-KFGNSRQDK 322
++ + K +S +++
Sbjct: 576 MTTKLKISSSLENE 589
Score = 59 (25.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 20/58 (34%), Positives = 28/58 (48%)
Query: 111 QPCCTKVADLQSPAEKKAFLSSAPAKNTAV-PNSSQKRTAPA-PVVGWPPIRSFRKNL 166
+P + D SP E + FL+++P A P S KR+ P P V P SF +L
Sbjct: 338 EPTTVQRPDKVSPWEIEPFLATSPISTPAQQPQSKCKRSRPIEPSVKTPAPPSFLYSL 395
>TAIR|locus:2206717 [details] [associations]
symbol:ARF20 "auxin response factor 20" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 EMBL:AC069160 HOGENOM:HOG000241141
eggNOG:NOG264447 ProtClustDB:CLSN2681760 EMBL:AY669795
IPI:IPI00656906 PIR:D86473 RefSeq:NP_174758.2 UniGene:At.51187
ProteinModelPortal:Q9C7I9 SMR:Q9C7I9 IntAct:Q9C7I9 PaxDb:Q9C7I9
PRIDE:Q9C7I9 EnsemblPlants:AT1G35240.1 GeneID:840413
KEGG:ath:AT1G35240 GeneFarm:3424 TAIR:At1g35240 PhylomeDB:Q9C7I9
Genevestigator:Q9C7I9 GermOnline:AT1G35240 Uniprot:Q9C7I9
Length = 590
Score = 87 (35.7 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 260 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREK 314
+ G L ++ + + D++G MLVGD PW F V ++ + EV L K
Sbjct: 532 LKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSK 586
Score = 77 (32.2 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 23/71 (32%), Positives = 37/71 (52%)
Query: 168 GASASKLPASESPNDVPSKTVD---EKPAHEPGRKNPFVKINMDGVPIGRKVDLNAYDSY 224
G+ SKL +E S+T+ E + + G K+ M GV IGR VDL+ + Y
Sbjct: 462 GSDISKL--TEGKKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGY 519
Query: 225 EKLSAAVDELF 235
++L +++LF
Sbjct: 520 DQLILELEKLF 530
>TAIR|locus:2009298 [details] [associations]
symbol:ARF21 "auxin response factor 21" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0046983 "protein
dimerization activity" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
InterPro:IPR003311 InterPro:IPR003340 InterPro:IPR010525
InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362 Pfam:PF06507
PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009734 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 HOGENOM:HOG000241141 eggNOG:NOG264447
ProtClustDB:CLSN2681760 EMBL:AC023279 EMBL:AC023913 IPI:IPI00539451
PIR:E86468 RefSeq:NP_174701.2 UniGene:At.51930
ProteinModelPortal:Q9C8N9 SMR:Q9C8N9 EnsemblPlants:AT1G34410.1
GeneID:840344 KEGG:ath:AT1G34410 GeneFarm:3425 TAIR:At1g34410
PhylomeDB:Q9C8N9 Genevestigator:Q9C8N9 GermOnline:AT1G34410
Uniprot:Q9C8N9
Length = 606
Score = 89 (36.4 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 260 ITGVLDGSGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALSREK 314
I G L ++ + + D++G MLVGD PW F V ++ + EV L K
Sbjct: 548 IKGQLQTRNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSK 602
Score = 75 (31.5 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 204 KINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
K+ M GV IGR VDL+ + Y++L +++LF
Sbjct: 515 KVQMQGVTIGRAVDLSVLNGYDQLILELEKLF 546
>TAIR|locus:2202205 [details] [associations]
symbol:ARF19 "auxin response factor 19" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;TAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0009725 "response to hormone
stimulus" evidence=IEA] [GO:0009733 "response to auxin stimulus"
evidence=RCA;IMP;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0048366 "leaf
development" evidence=IGI] [GO:0048527 "lateral root development"
evidence=IGI;RCA] [GO:0009723 "response to ethylene stimulus"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0010311
"lateral root formation" evidence=IGI] [GO:0007155 "cell adhesion"
evidence=RCA] [GO:0009741 "response to brassinosteroid stimulus"
evidence=RCA] [GO:0010090 "trichome morphogenesis" evidence=RCA]
[GO:0010583 "response to cyclopentenone" evidence=RCA] [GO:0045010
"actin nucleation" evidence=RCA] [GO:0048765 "root hair cell
differentiation" evidence=RCA] [GO:0071555 "cell wall organization"
evidence=RCA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046983 "protein dimerization activity"
evidence=IDA] InterPro:IPR003311 InterPro:IPR003340
InterPro:IPR010525 InterPro:IPR011525 Pfam:PF02309 Pfam:PF02362
Pfam:PF06507 PROSITE:PS50863 PROSITE:PS50962 SMART:SM01019
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009733
GO:GO:0009734 GO:GO:0009723 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0046983 Gene3D:2.40.330.10 InterPro:IPR015300
SUPFAM:SSF101936 GO:GO:0010311 GO:GO:0048366 HOGENOM:HOG000241141
EMBL:U53672 EMBL:AY008390 EMBL:AY669794 EMBL:AC069143 EMBL:AB493467
EMBL:AJ441312 IPI:IPI00534870 PIR:G86325 RefSeq:NP_173356.1
UniGene:At.10488 ProteinModelPortal:Q8RYC8 SMR:Q8RYC8 IntAct:Q8RYC8
STRING:Q8RYC8 EnsemblPlants:AT1G19220.1 GeneID:838505
KEGG:ath:AT1G19220 GeneFarm:3421 TAIR:At1g19220 eggNOG:NOG331338
InParanoid:Q8RYC8 OMA:WEIEPVI PhylomeDB:Q8RYC8
ProtClustDB:CLSN2914206 Genevestigator:Q8RYC8 GermOnline:AT1G19220
Uniprot:Q8RYC8
Length = 1086
Score = 109 (43.4 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 260 ITGVLDG--SGEYTLVYEDNEGDRMLVGDVPWHMFVSTVTRLRVLKSSEVSALS 311
I G L+ + ++ LVY D+E D +LVGD PW FV+ V +++L S EV +S
Sbjct: 994 IEGQLEDPLTSDWKLVYTDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMS 1047
Score = 53 (23.7 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 198 RKNPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELF 235
R + K+ G +GR +D+ Y Y++L + +F
Sbjct: 956 RMRTYTKVQKRG-SVGRSIDVTRYSGYDELRHDLARMF 992
Score = 40 (19.1 bits), Expect = 0.00073, Sum P(3) = 0.00073
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 153 VVGWPPIRSFRKNLAGASASKLPASESPNDVPSKTVDEKPA 193
+V W ++ L+G++ +LP++ S ++P+ P+
Sbjct: 416 LVQWMSMQQ-NNPLSGSATPQLPSALSSFNLPNNFASNDPS 455
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.377 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 325 292 0.00090 115 3 11 23 0.46 34
33 0.44 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 54
No. of states in DFA: 604 (64 KB)
Total size of DFA: 200 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.28u 0.15s 26.43t Elapsed: 00:00:01
Total cpu time: 26.29u 0.15s 26.44t Elapsed: 00:00:01
Start: Tue May 21 04:09:50 2013 End: Tue May 21 04:09:51 2013