Query 020493
Match_columns 325
No_of_seqs 186 out of 527
Neff 3.9
Searched_HMMs 29240
Date Mon Mar 25 03:48:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020493.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020493hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vd2_A Protein kinase C, IOTA 95.4 0.037 1.3E-06 44.2 6.8 58 200-286 6-63 (89)
2 1wmh_B Partitioning defective- 95.2 0.041 1.4E-06 43.9 6.4 69 201-297 7-76 (86)
3 2kkc_A Sequestosome-1; P62, PB 93.7 0.098 3.4E-06 42.7 5.5 61 200-287 5-80 (102)
4 2ktr_A Sequestosome-1; autopha 91.8 0.29 9.9E-06 41.0 5.9 61 199-287 19-95 (117)
5 1q1o_A Cell division control p 88.0 1.4 4.8E-05 35.8 6.9 74 201-297 6-86 (98)
6 1oey_J P40-PHOX, neutrophil cy 73.4 4.2 0.00014 33.6 4.7 41 217-287 28-68 (107)
7 1pqs_A Cell division control p 72.4 3 0.0001 32.3 3.4 56 218-297 8-65 (77)
8 2bkf_A Zinc-finger protein NBR 71.0 13 0.00044 29.7 6.8 55 202-286 8-62 (87)
9 1wj6_A KIAA0049 protein, RSGI 64.8 13 0.00045 30.4 5.8 63 202-296 16-78 (101)
10 1oey_A P67-PHOX, neutrophil cy 52.6 46 0.0016 26.0 6.9 70 201-301 6-78 (83)
11 1e8p_A Endoglucanase, dockerin 50.1 4.5 0.00015 28.9 0.6 13 271-283 20-32 (46)
12 2j4m_A Endoglucanase 45A; dock 25.3 14 0.00047 30.3 -0.2 13 271-283 21-33 (100)
13 2npt_A Dual specificity mitoge 24.1 1.3E+02 0.0044 24.6 5.3 58 200-286 14-72 (106)
14 3o27_A Putative uncharacterize 22.4 48 0.0016 25.4 2.3 17 268-284 43-59 (68)
No 1
>1vd2_A Protein kinase C, IOTA type; PB1 domain, OPCA motif, APKC, ZIP/P62, MEK5, molecular recognition, transferase; NMR {Homo sapiens} SCOP: d.15.2.2 PDB: 1wmh_A
Probab=95.44 E-value=0.037 Score=44.20 Aligned_cols=58 Identities=22% Similarity=0.210 Sum_probs=43.6
Q ss_pred CCceEEEecCcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCCC
Q 020493 200 NPFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEG 279 (325)
Q Consensus 200 ~~fVKV~MDGvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkEG 279 (325)
.+=|||+-.|--+--.|+. .-+|++|...|.++|.- .. ...|++.|.|.||
T Consensus 6 ~vkvK~~~~gdi~~~~v~~--~i~~~~L~~kv~~~~~~--------------------------~~-~~~f~lky~DEeG 56 (89)
T 1vd2_A 6 QVRVKAYYRGDIMITHFEP--SISFEGLCNEVRDMCSF--------------------------DN-EQLFTMKWIDEEG 56 (89)
T ss_dssp CEEEEEESSSCEEEEEECT--TCCHHHHHHHHHHHTTC--------------------------CS-SCCEEEEECCSSS
T ss_pred eEEEEEEeCCeEEEEECCC--CCCHHHHHHHHHHHhCC--------------------------CC-CCeEEEEEECCCC
Confidence 3568889999755444555 56999999999999961 01 1369999999999
Q ss_pred CeEecCC
Q 020493 280 DRMLVGD 286 (325)
Q Consensus 280 DwMLVGD 286 (325)
|+.-+-.
T Consensus 57 D~itisS 63 (89)
T 1vd2_A 57 DPCTVSS 63 (89)
T ss_dssp CCEECCS
T ss_pred CcccccC
Confidence 9976654
No 2
>1wmh_B Partitioning defective-6 homolog alpha; kinase, PB1 domain, OPCA motif, APKC, cell polarity, transferase/cell cycle complex; 1.50A {Homo sapiens} SCOP: d.15.2.2
Probab=95.23 E-value=0.041 Score=43.94 Aligned_cols=69 Identities=14% Similarity=0.130 Sum_probs=51.1
Q ss_pred CceEEEecCcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCCCC
Q 020493 201 PFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGD 280 (325)
Q Consensus 201 ~fVKV~MDGvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkEGD 280 (325)
.-||...|+.--=-.||-+...+|++|..-|+++|.- . ...|++.|.|.|||
T Consensus 7 l~vKskf~aE~RRFs~d~~~~~~fe~f~~lv~~lh~L--~--------------------------~~~f~i~Y~D~dGD 58 (86)
T 1wmh_B 7 VEVKSKFDAEFRRFALPRASVSGFQEFSRLLRAVHQI--P--------------------------GLDVLLGYTDAHGD 58 (86)
T ss_dssp EEEEEEETTEEEEEEEEGGGCCCHHHHHHHHHHHTTC--T--------------------------TCCCEEEEECTTSC
T ss_pred EEEEeecCCeeeEeEccCCCCCCHHHHHHHHHHHcCC--C--------------------------CCCEEEEEECCCCC
Confidence 4588888886433356666778999999999999961 1 13699999999999
Q ss_pred eEecCCc-ChhHHhhcce
Q 020493 281 RMLVGDV-PWHMFVSTVT 297 (325)
Q Consensus 281 wMLVGDV-PWemFv~SvK 297 (325)
++=+=+. =..+=+.++|
T Consensus 59 LlpInnDdnl~~Al~~a~ 76 (86)
T 1wmh_B 59 LLPLTNDDSLHRALASGP 76 (86)
T ss_dssp EEECCSHHHHHHHTTSSS
T ss_pred EeeecCHHHHHHHHHhCC
Confidence 9988765 3334455666
No 3
>2kkc_A Sequestosome-1; P62, PB1, autophagy, ubiquitin-proteasome system, NF-KB signaling, alternative splicing, apoptosis, cytoplasm, differentiation; NMR {Rattus norvegicus} PDB: 2ktr_B
Probab=93.73 E-value=0.098 Score=42.69 Aligned_cols=61 Identities=23% Similarity=0.255 Sum_probs=43.8
Q ss_pred CCceEEEecCc----ccceeecCCC-----------CCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCC
Q 020493 200 NPFVKINMDGV----PIGRKVDLNA-----------YDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVL 264 (325)
Q Consensus 200 ~~fVKV~MDGv----pIGRKVDL~~-----------y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~ll 264 (325)
++-||++..|- .==|.+=|.. ..+|+.|...+.++|..+
T Consensus 5 ~~~vKayl~~~~~~~~EiRRF~l~~~~~p~~~~~~~~~s~~~L~~~V~~lFp~l-------------------------- 58 (102)
T 2kkc_A 5 SLTVKAYLLGKEEAAREIRRFSFCFSPEPEAEAAAGPGPCERLLSRVAVLFPAL-------------------------- 58 (102)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEEESSSCSCSSSCCSCCHHHHHHHHHHHHCTTS--------------------------
T ss_pred eEEEEEEEccCCCCCCceEEEEeccCCCcccccccccccHHHHHHHHHHHcccc--------------------------
Confidence 45688888752 2235554432 248999999999999631
Q ss_pred CCCCCeEEEEecCCCCeEecCCc
Q 020493 265 DGSGEYTLVYEDNEGDRMLVGDV 287 (325)
Q Consensus 265 dgs~eyvltYEDkEGDwMLVGDV 287 (325)
.+ ..|.|.|.|.|||++-+-+.
T Consensus 59 ~~-~~f~l~Y~DedGDlItiSsD 80 (102)
T 2kkc_A 59 RP-GGFQAHYRAERGDLVAFSSD 80 (102)
T ss_dssp CS-SCEEEEEECTTCCEEEECSH
T ss_pred CC-CcEEEEEECCCCCEEEecCH
Confidence 11 36999999999999888765
No 4
>2ktr_A Sequestosome-1; autophagy, NF-KB signaling, HOMO-oligomer, PB1 dimer, signaling protein, transport protein; NMR {Rattus norvegicus}
Probab=91.82 E-value=0.29 Score=40.98 Aligned_cols=61 Identities=25% Similarity=0.318 Sum_probs=44.5
Q ss_pred CCCceEEEecC-----cccceeecCC-----------CCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhc
Q 020493 199 KNPFVKINMDG-----VPIGRKVDLN-----------AYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITG 262 (325)
Q Consensus 199 ~~~fVKV~MDG-----vpIGRKVDL~-----------~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~ 262 (325)
.++-||++..| ..| |++=|. .-.+|+.|...+.++|..
T Consensus 19 ~~l~vKayl~~~~~~~~EI-RRF~l~~~~~p~~~~~~~~~s~~~L~~kV~~lFp~------------------------- 72 (117)
T 2ktr_A 19 GSLTVKAYLLGKEEAAREI-RRFSFCFSPEPEAEAAAGPGPSERLLSRVAVLFPA------------------------- 72 (117)
T ss_dssp -CEEEEEEEECSSSCEEEE-EEEEECSSSCSCSSSCCSCCHHHHHHHHHHHHCTT-------------------------
T ss_pred ccEEEEEEEecCCCCCCcE-EEEEeccCCCccccccccCCCHHHHHHHHHHHccc-------------------------
Confidence 46789999974 223 555443 245999999999999962
Q ss_pred CCCCCCCeEEEEecCCCCeEecCCc
Q 020493 263 VLDGSGEYTLVYEDNEGDRMLVGDV 287 (325)
Q Consensus 263 lldgs~eyvltYEDkEGDwMLVGDV 287 (325)
|.+ ..|.|.|.|.|||++-+-..
T Consensus 73 -L~~-~~f~l~YkDEdGDlItISsD 95 (117)
T 2ktr_A 73 -LRP-GGFQAHYRAERGDLVAFSSD 95 (117)
T ss_dssp -SCS-SCEEEEEECTTCCEEEECSH
T ss_pred -cCC-CcEEEEEECCCCCEEEecCH
Confidence 112 36999999999999887764
No 5
>1q1o_A Cell division control protein 24; PB1 domain, PCCR, PC motif, OPCA motif, yeast, cell polarity, protein-protein interaction; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 2kfj_A 2kfk_B
Probab=88.00 E-value=1.4 Score=35.78 Aligned_cols=74 Identities=14% Similarity=0.292 Sum_probs=52.7
Q ss_pred CceEEEecCc----ccc--eeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEE
Q 020493 201 PFVKINMDGV----PIG--RKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVY 274 (325)
Q Consensus 201 ~fVKV~MDGv----pIG--RKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltY 274 (325)
+-|||+-+.. .++ +.|=+..--+|++|...+.+-|..+.. + + . +....|-|
T Consensus 6 ikVKv~y~~~~~~~~~~d~~~i~V~~~i~f~~L~~kI~~Kl~~~~~---~-----------------~-i--~~~~klkY 62 (98)
T 1q1o_A 6 ILFRISYNNNSNNTSSSEIFTLLVEKVWNFDDLIMAINSKISNTHN---N-----------------N-I--SPITKIKY 62 (98)
T ss_dssp EEEEEEECSSCSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHCS---S-----------------C-C--CCCCCEEE
T ss_pred EEEEEEecCcccccccCcEEEEEecCCCCHHHHHHHHHHHHcCCcc---c-----------------c-c--cceeEEEE
Confidence 5678877632 122 566667778899999999999974210 0 0 0 13468999
Q ss_pred ecCCCCeEecCC-cChhHHhhcce
Q 020493 275 EDNEGDRMLVGD-VPWHMFVSTVT 297 (325)
Q Consensus 275 EDkEGDwMLVGD-VPWemFv~SvK 297 (325)
+|.|||+...++ .=|+|-+.+++
T Consensus 63 kDEdGD~Vtl~sddDl~~A~e~~~ 86 (98)
T 1q1o_A 63 QDEDGDFVVLGSDEDWNVAKEMLA 86 (98)
T ss_dssp ECSSSCEEEECSHHHHHHHHHHHH
T ss_pred EcCCCCEEEEcCHHHHHHHHHHHH
Confidence 999999988877 58998888763
No 6
>1oey_J P40-PHOX, neutrophil cytosol factor 4; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=73.40 E-value=4.2 Score=33.63 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=33.0
Q ss_pred cCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCCCCeEecCCc
Q 020493 217 DLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDRMLVGDV 287 (325)
Q Consensus 217 DL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkEGDwMLVGDV 287 (325)
||+.--.|.+|..-..+-|.. .+-+|-|.|.|||++-+=|.
T Consensus 28 dl~~~P~ykdLl~lmr~~F~~------------------------------~DIaLNYrD~eGDLIrildd 68 (107)
T 1oey_J 28 DLSSTPLLKDLLELTRREFQR------------------------------EDIALNYRDAEGDLVRLLSD 68 (107)
T ss_dssp CTTCCCCHHHHHHHHHHHHCC------------------------------SSEEEEEECTTSCEEECCSH
T ss_pred ccccCCCHHHHHHHHHHHhcc------------------------------cceeeeeecCCCCEEEEcch
Confidence 677788999999999998851 25689999999999766554
No 7
>1pqs_A Cell division control protein 24; alpha and beta protein, cell cycle; NMR {Saccharomyces cerevisiae} SCOP: d.15.2.2 PDB: 1tz1_A
Probab=72.35 E-value=3 Score=32.26 Aligned_cols=56 Identities=16% Similarity=0.376 Sum_probs=41.0
Q ss_pred CCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCC-CCCeEEEEecCCCCeEecCC-cChhHHhhc
Q 020493 218 LNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDG-SGEYTLVYEDNEGDRMLVGD-VPWHMFVST 295 (325)
Q Consensus 218 L~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldg-s~eyvltYEDkEGDwMLVGD-VPWemFv~S 295 (325)
+..--+|++|...+.+-|..+ . + ++ .....|-|.|.|||+...++ .=|+|=+.+
T Consensus 8 V~~~i~f~~L~~kI~~kl~~~-~-----~------------------~~~~~~~~lkYkDEdGD~Vti~sddDl~~A~~~ 63 (77)
T 1pqs_A 8 VEKVWNFDDLIMAINSKISNT-H-----N------------------NNISPITKIKYQDEDGDFVVLGSDEDWNVAKEM 63 (77)
T ss_dssp CTTCCCSHHHHHHHHHHTTTT-T-----S------------------SCSCSTTCCEEEETTTEEEECCSTTHHHHHHHH
T ss_pred eCCCCCHHHHHHHHHHHHccc-c-----c------------------ccccceeEEEEEcCCCCEEEEcCHHHHHHHHHH
Confidence 344567999999999988632 0 0 11 24578999999999987765 589998887
Q ss_pred ce
Q 020493 296 VT 297 (325)
Q Consensus 296 vK 297 (325)
+|
T Consensus 64 ~~ 65 (77)
T 1pqs_A 64 LA 65 (77)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 8
>2bkf_A Zinc-finger protein NBR1 (NEXT to breast cancer 1; PB1 domain, interaction domain, Z finger; 1.56A {Homo sapiens} SCOP: d.15.2.2 PDB: 2g4s_A
Probab=70.99 E-value=13 Score=29.66 Aligned_cols=55 Identities=15% Similarity=0.221 Sum_probs=40.6
Q ss_pred ceEEEecCcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCCCCe
Q 020493 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDR 281 (325)
Q Consensus 202 fVKV~MDGvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkEGDw 281 (325)
-+||+--|...=--|.-..--++++|...|..+|+ | ..++|.|-|.|||-
T Consensus 8 ~lkV~f~ge~~rf~vs~~~~~tweel~~mvk~~f~---------------------------L---~~~~ikY~DEenD~ 57 (87)
T 2bkf_A 8 TLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFD---------------------------L---NTIQIKYLDEENEE 57 (87)
T ss_dssp EEEEEETTEEEEEEESCGGGCCHHHHHHHHHHHHT---------------------------C---SSEEEEEECTTSCE
T ss_pred EEEEEEcCCeeEEEeccCCCCCHHHHHHHHHHHcC---------------------------C---CceEEEEEcCCCCE
Confidence 47899999754444644446789998888888884 1 26899999999998
Q ss_pred EecCC
Q 020493 282 MLVGD 286 (325)
Q Consensus 282 MLVGD 286 (325)
.-|=-
T Consensus 58 v~i~S 62 (87)
T 2bkf_A 58 VSINS 62 (87)
T ss_dssp EEECS
T ss_pred EEEec
Confidence 76643
No 9
>1wj6_A KIAA0049 protein, RSGI RUH-024; PB1 domain, protein binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: d.15.2.2
Probab=64.78 E-value=13 Score=30.43 Aligned_cols=63 Identities=13% Similarity=0.191 Sum_probs=45.4
Q ss_pred ceEEEecCcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCCCCe
Q 020493 202 FVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNEGDR 281 (325)
Q Consensus 202 fVKV~MDGvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkEGDw 281 (325)
-+||+--|...=--|.-..--.+++|...|..+|. | ..++|.|-|.|||-
T Consensus 16 ~lkV~f~ge~~rF~Vs~~~~~tweel~~mvk~~f~---------------------------L---~~~~IkY~DEenD~ 65 (101)
T 1wj6_A 16 TLNVTFKNEIQSFLVSDPENTTWADIEAMVKVSFD---------------------------L---NTIQIKYLDEENEE 65 (101)
T ss_dssp EEEEEETTEEEEEEESCTTTSCHHHHHHHHHHHHC---------------------------C---SSBCCEEECTTSCE
T ss_pred EEEEEEcCCeeEEEecCCCCCCHHHHHHHHHHHcC---------------------------C---CceEEEEecCCCCE
Confidence 47999999764445644446789998888888884 1 25799999999998
Q ss_pred EecCCcChhHHhhcc
Q 020493 282 MLVGDVPWHMFVSTV 296 (325)
Q Consensus 282 MLVGDVPWemFv~Sv 296 (325)
.-|=- +.+|-+.+
T Consensus 66 V~i~S--q~E~eEAl 78 (101)
T 1wj6_A 66 VSINS--QGEYEEAL 78 (101)
T ss_dssp ECCCS--HHHHHHHH
T ss_pred EEEec--HHHHHHHH
Confidence 87753 45554443
No 10
>1oey_A P67-PHOX, neutrophil cytosol factor 2; immune system, PB1 heterodimer/complex, NADPH oxidase, PB1 D heterodimerization; 2.0A {Homo sapiens} SCOP: d.15.2.2
Probab=52.63 E-value=46 Score=26.03 Aligned_cols=70 Identities=10% Similarity=0.078 Sum_probs=51.6
Q ss_pred CceEEEecCcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEec-CCC
Q 020493 201 PFVKINMDGVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYED-NEG 279 (325)
Q Consensus 201 ~fVKV~MDGvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYED-kEG 279 (325)
+=|||+-. +--.|....=-+|.+|...|.+=+.- + ..+-+|-|.| .+|
T Consensus 6 ~~VKV~~~---~tvairvp~~~~y~~L~~~l~~kL~l----~------------------------~~~~~LsYk~~~s~ 54 (83)
T 1oey_A 6 YTLKVHYK---YTVVMKTQPGLPYSQVRDMVSKKLEL----R------------------------LEHTKLSYRPRDSN 54 (83)
T ss_dssp EEEEEESS---SEEEEEECTTCCHHHHHHHHHHHTTC----C------------------------GGGCCEEECCTTCS
T ss_pred EEEEEEEE---EEEEEECCCCCCHHHHHHHHHHHhCC----C------------------------cceeEEEeeCCCCC
Confidence 34677766 66777778888999999999887641 0 0123688999 688
Q ss_pred CeEecCCcChhHHhhcce--EeEE
Q 020493 280 DRMLVGDVPWHMFVSTVT--RLRV 301 (325)
Q Consensus 280 DwMLVGDVPWemFv~SvK--RLrI 301 (325)
.|++.+|.=|+.-.+.|+ ||++
T Consensus 55 ~~vi~~d~dl~~aw~~~~n~~LtL 78 (83)
T 1oey_A 55 ELVPLSEDSMKDAWGQVKNYCLTL 78 (83)
T ss_dssp SCEECCTTTHHHHHTTCBTTEEEE
T ss_pred CeeccChHHHHHHHHhccCCcEEE
Confidence 999999999998887754 5554
No 11
>1e8p_A Endoglucanase, dockerin; cellulose docking domain, cellulase; NMR {Piromyces equi} SCOP: g.55.1.1 PDB: 1e8q_A
Probab=50.05 E-value=4.5 Score=28.94 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=11.3
Q ss_pred EEEEecCCCCeEe
Q 020493 271 TLVYEDNEGDRML 283 (325)
Q Consensus 271 vltYEDkEGDwML 283 (325)
.++|+|.||||=.
T Consensus 20 ~V~YtD~dG~WGV 32 (46)
T 1e8p_A 20 KVEYTDASGQWGV 32 (46)
T ss_dssp CEEEEETTEEEEE
T ss_pred eEEEEcCCCcccc
Confidence 5899999999954
No 12
>2j4m_A Endoglucanase 45A; dockerin, cellulosome, protein binding, small cysteine-rich; NMR {Piromyces equi} PDB: 2j4n_A
Probab=25.29 E-value=14 Score=30.27 Aligned_cols=13 Identities=23% Similarity=0.424 Sum_probs=11.2
Q ss_pred EEEEecCCCCeEe
Q 020493 271 TLVYEDNEGDRML 283 (325)
Q Consensus 271 vltYEDkEGDwML 283 (325)
.++|.|.||||=.
T Consensus 21 ~V~YtD~dG~WGV 33 (100)
T 2j4m_A 21 KVEYTDASGQWGV 33 (100)
T ss_dssp CCCEESSSCEEEE
T ss_pred eEEEEcCCCccce
Confidence 5889999999954
No 13
>2npt_A Dual specificity mitogen-activated protein kinase; MAP2K5, MEK5, MKK PRKMK5, MAP kinase kinase 5, PHOX, PHOX-domain; 1.75A {Homo sapiens} SCOP: d.15.2.2 PDB: 2o2v_A 1wi0_A
Probab=24.12 E-value=1.3e+02 Score=24.59 Aligned_cols=58 Identities=16% Similarity=0.291 Sum_probs=39.5
Q ss_pred CCceEEEec-CcccceeecCCCCCChHHHHHHHHHHHhhhhhcccCCCCCcccchhhhhHhhhcCCCCCCCeEEEEecCC
Q 020493 200 NPFVKINMD-GVPIGRKVDLNAYDSYEKLSAAVDELFRGLLAAQRDSSAGGIVNKQEEEKAITGVLDGSGEYTLVYEDNE 278 (325)
Q Consensus 200 ~~fVKV~MD-GvpIGRKVDL~~y~sYeeLs~aLe~MF~~~~~~q~~~s~~~~~~~~~e~k~i~~lldgs~eyvltYEDkE 278 (325)
+.-+.|... |..+--.||-..+=+|.+|+.++.+..-.- .--.+-|||.+
T Consensus 14 ~lVIRIk~p~~g~vDwaV~~~~~L~FrDvL~~I~~vmP~a-----------------------------T~TAFeYEDE~ 64 (106)
T 2npt_A 14 VLVIRIKIPNSGAVDWTVHSGPQLLFRDVLDVIGQVLPEA-----------------------------TTTAFEYEDED 64 (106)
T ss_dssp CEEEEEEETTTEEEEEEECC--CCCHHHHHHHHHHHSTTS-----------------------------CCSEEEEECTT
T ss_pred ceEEEEECCCCCccccccCCcccccHHHHHHHHHHhCccc-----------------------------eeeeeeecccc
Confidence 345566665 667778888777778888888887755310 12257799999
Q ss_pred CCeEecCC
Q 020493 279 GDRMLVGD 286 (325)
Q Consensus 279 GDwMLVGD 286 (325)
||++-|--
T Consensus 65 gDRITVRS 72 (106)
T 2npt_A 65 GDRITVRS 72 (106)
T ss_dssp SCEEEECS
T ss_pred CCeeEEcc
Confidence 99988754
No 14
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=22.40 E-value=48 Score=25.39 Aligned_cols=17 Identities=29% Similarity=0.542 Sum_probs=15.1
Q ss_pred CCeEEEEecCCCCeEec
Q 020493 268 GEYTLVYEDNEGDRMLV 284 (325)
Q Consensus 268 ~eyvltYEDkEGDwMLV 284 (325)
.+|.++++|++|+.+|+
T Consensus 43 D~fel~ve~kdgeIvLc 59 (68)
T 3o27_A 43 DTFILNMEQKDGDIVLS 59 (68)
T ss_dssp CCEEEEEEEETTEEEEE
T ss_pred CEEEEEEecCCCeEEEE
Confidence 48999999999998875
Done!