Query 020496
Match_columns 325
No_of_seqs 188 out of 1102
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 03:51:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oox_A Putative 2OG-Fe(II) oxy 100.0 7.7E-71 2.6E-75 512.7 22.9 277 11-324 4-282 (312)
2 1gp6_A Leucoanthocyanidin diox 100.0 8.4E-67 2.9E-71 493.3 21.3 265 13-324 46-319 (356)
3 1odm_A Isopenicillin N synthas 100.0 4.5E-66 1.5E-70 484.2 22.0 270 11-324 6-299 (331)
4 1w9y_A 1-aminocyclopropane-1-c 100.0 1.9E-65 6.6E-70 477.1 17.5 258 12-324 2-264 (319)
5 3on7_A Oxidoreductase, iron/as 100.0 7.4E-64 2.5E-68 458.6 22.9 255 12-322 2-263 (280)
6 1dcs_A Deacetoxycephalosporin 100.0 1.2E-64 4.2E-69 470.5 17.8 257 12-320 3-274 (311)
7 3dkq_A PKHD-type hydroxylase S 92.4 0.14 4.8E-06 44.9 4.9 48 249-312 147-194 (243)
8 2rg4_A Uncharacterized protein 89.6 0.72 2.5E-05 39.5 6.7 44 258-315 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 87.7 0.89 3E-05 39.8 6.1 87 193-312 118-212 (247)
10 3tht_A Alkylated DNA repair pr 83.0 2 6.7E-05 39.5 6.2 40 250-289 235-274 (345)
11 3s57_A Alpha-ketoglutarate-dep 70.2 20 0.00067 30.1 8.4 44 258-310 157-200 (204)
12 3i3q_A Alpha-ketoglutarate-dep 68.9 5.1 0.00017 34.0 4.5 46 257-311 152-201 (211)
13 2iuw_A Alkylated repair protei 66.9 16 0.00053 31.5 7.3 45 258-311 184-228 (238)
14 2jig_A Prolyl-4 hydroxylase; h 66.2 5.5 0.00019 33.8 4.2 47 260-313 170-217 (224)
15 3itq_A Prolyl 4-hydroxylase, a 63.8 10 0.00034 32.3 5.3 45 261-312 166-211 (216)
16 2dbn_A Hypothetical protein YB 56.1 13 0.00043 35.3 4.9 54 11-69 98-151 (461)
17 3o2g_A Gamma-butyrobetaine dio 52.8 8.6 0.00029 35.7 3.3 52 13-70 122-173 (388)
18 2a1x_A Phytanoyl-COA dioxygena 50.5 32 0.0011 30.3 6.6 35 32-69 26-60 (308)
19 1otj_A Alpha-ketoglutarate-dep 45.4 13 0.00045 32.5 3.1 50 12-68 16-65 (283)
20 2opi_A L-fuculose-1-phosphate 43.3 13 0.00046 31.1 2.8 36 13-52 125-160 (212)
21 3pvj_A Alpha-ketoglutarate-dep 42.5 13 0.00043 32.8 2.5 51 12-69 14-64 (277)
22 1pvt_A Sugar-phosphate aldolas 39.4 21 0.00071 30.5 3.4 36 13-52 161-196 (238)
23 1oih_A Putative alkylsulfatase 38.2 20 0.00068 31.7 3.2 49 14-69 28-77 (301)
24 1e4c_P L-fuculose 1-phosphate 38.2 19 0.00064 30.3 2.8 36 13-52 122-157 (215)
25 2fk5_A Fuculose-1-phosphate al 33.7 25 0.00086 29.2 2.9 51 13-67 117-176 (200)
26 3r1j_A Alpha-ketoglutarate-dep 31.5 32 0.0011 30.6 3.4 52 12-70 20-72 (301)
27 2v9l_A Rhamnulose-1-phosphate 31.5 25 0.00087 30.8 2.7 36 13-52 179-214 (274)
28 2vf9_A Coat protein; virion, R 29.2 19 0.00064 26.2 1.1 30 263-296 38-67 (131)
29 2z7b_A MLR6791 protein; class 29.0 27 0.00094 30.5 2.4 38 13-52 157-201 (270)
30 1nx8_A CARC, carbapenem syntha 28.4 19 0.00066 31.1 1.3 45 13-68 18-62 (273)
31 3ocr_A Class II aldolase/adduc 28.3 34 0.0012 30.0 2.9 50 13-65 156-207 (273)
32 2irp_A Putative aldolase class 25.4 22 0.00077 29.6 1.1 35 13-52 139-176 (208)
33 4ay7_A Methylcobalamin\: coenz 22.5 86 0.0029 28.1 4.6 40 28-69 305-348 (348)
No 1
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=7.7e-71 Score=512.72 Aligned_cols=277 Identities=19% Similarity=0.185 Sum_probs=238.1
Q ss_pred CccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCCChhhhhhhccCCCCCccccc
Q 020496 11 TLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWS 90 (325)
Q Consensus 11 ~~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~ 90 (325)
.++||+|||+.|.+.+++++++|.+||++ ||||||+||||+.++++++++.+++||+||.|+|+++... ...++||.
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~--~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~ 80 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFER--YGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYI 80 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHH--HSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEE
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHh--CcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccccc
Confidence 35799999999976666889999999999 9999999999999999999999999999999999999875 44689998
Q ss_pred c-CcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020496 91 H-GKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQY 169 (325)
Q Consensus 91 ~-~~e~~~~g~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~l~~~l~~~l~~~ 169 (325)
+ +.|........|+||+|+++. +.+.+++. .....+|+||++ +|+||+++++|+++|.+|+..|+++|+
T Consensus 81 ~~g~e~~~~~~~~D~kE~~~~~~--~~~~~~~~-----~~~~~~n~wP~~-~p~fr~~~~~y~~~~~~l~~~ll~~la-- 150 (312)
T 3oox_A 81 PFGVETAKGADHYDLKEFWHMGR--DLPPGHRF-----RAHMADNVWPAE-IPAFKHDVSWLYNSLDGMGGKVLEAIA-- 150 (312)
T ss_dssp CCCCCCSTTSCSCCCCEEEEECC--CCCTTCGG-----GGTSCCCCCCTT-STTHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cccceecCCCCCCCceeeeEeec--CCCcCCcc-----hhccCCCCCCCc-CHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 7 666554334457999999985 34433321 112467999984 899999999999999999999999975
Q ss_pred HHhcCCCCcchhHHHHhhcCCCcceeeccCCCCCCCCcccCCCCCCCcccccccccccccccccccccCCCccCCCCCCC
Q 020496 170 VSKGMKMKENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPDSAA 249 (325)
Q Consensus 170 i~~~Lgl~~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~~~~~~~~~d~~~ 249 (325)
++||+ ++++|++.+.++.+ .||++||||++.+. . .+|+++|||+|+|||| +||+++
T Consensus 151 --~~Lgl-~~~~f~~~~~~~~~-~lr~~~Ypp~~~~~---~----~~g~~~HtD~g~lTlL-------------~qd~v~ 206 (312)
T 3oox_A 151 --TYLKL-ERDFFKPTVQDGNS-VLRLLHYPPIPKDA---T----GVRAGAHGDINTITLL-------------LGAEEG 206 (312)
T ss_dssp --HHTTS-CTTTTHHHHTTCCC-EEEEEEECCCSSCC---C------CEEEECCCSSEEEE-------------ECCTTS
T ss_pred --HHhCc-CHHHHHHHhcCCcc-eeeeEecCCCCCCc---C----CcCccceecCceEEEE-------------eEcCcC
Confidence 88999 78899998877665 89999999998653 1 4899999999999999 778999
Q ss_pred ceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcC-CCCceeEEEeeccCCCCccccccCC
Q 020496 250 GLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSII-HFVFREDFGKFSPYHAYTVIKLTQT 324 (325)
Q Consensus 250 GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~-~~~~R~Si~~F~~P~~d~~i~p~~~ 324 (325)
||||++++|+|++|+|+||++||||||+||+||||+||||+|||++++.. ...+|||++||++|+.|++|+|.+.
T Consensus 207 GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~ 282 (312)
T 3oox_A 207 GLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQN 282 (312)
T ss_dssp CEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGG
T ss_pred ceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCcc
Confidence 99999889999999999999999999999999999999999999987542 2478999999999999999999864
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=8.4e-67 Score=493.34 Aligned_cols=265 Identities=17% Similarity=0.175 Sum_probs=228.7
Q ss_pred cceEEecccccCcch----HHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCCChhhhhhhccCCC-CCcc
Q 020496 13 RTVTISYSELKDKNA----DLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHS-RYNF 87 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~----~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~ 87 (325)
.||+|||+.|.+++. +++++|.+||++ ||||||+||||+.++++++++.+++||+||.|+|+++..... ..++
T Consensus 46 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~--~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~ 123 (356)
T 1gp6_A 46 QVPTIDLKNIESDDEKIRENCIEELKKASLD--WGVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQ 123 (356)
T ss_dssp CCCEEECTTTTCSCHHHHHHHHHHHHHHHHH--TSEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCS
T ss_pred CCCEEEchhccCCChHHHHHHHHHHHHHHHh--CCEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCcc
Confidence 699999999975443 488999999999 999999999999999999999999999999999999987654 4678
Q ss_pred ccccCcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Q 020496 88 GWSHGKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCD 167 (325)
Q Consensus 88 GY~~~~e~~~~g~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~l~~~l~~~l~ 167 (325)
||.........+.+ ||+|.|+++. .|.+ . ..+|+||+ .+|+||+++++|+++|.+|+..|+++|+
T Consensus 124 Gy~~~~~~~~~~~~-d~kE~~~~~~---~p~~-~---------~~~~~wP~-~~~~fr~~~~~y~~~~~~l~~~ll~~la 188 (356)
T 1gp6_A 124 GYGSKLANNASGQL-EWEDYFFHLA---YPEE-K---------RDLSIWPK-TPSDYIEATSEYAKCLRLLATKVFKALS 188 (356)
T ss_dssp EEECCCCCSTTCCC-CSCEEEEEEE---ESGG-G---------CCGGGSCC-SSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCcCcccCCCCCC-Chhheeeeec---CCcc-c---------cccccCCC-cchhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99873222222344 5999999984 1211 0 35689998 4899999999999999999999999975
Q ss_pred HHHHhcCCCCcchhHHHHhh---cCCCcceeeccCCCCCCCCcccCCCCCCCcccccccccccccccccccccCCCccCC
Q 020496 168 QYVSKGMKMKENEGLEQILL---HSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPC 244 (325)
Q Consensus 168 ~~i~~~Lgl~~~~~~~~~~~---~~~~~~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~~~~~~~~ 244 (325)
++||+ ++++|++.+. .+.+ .||++||||++.++. .+|+++|||+|+|||| +
T Consensus 189 ----~~Lgl-~~~~f~~~~~~~~~~~~-~lrl~~YPp~~~~~~-------~~g~~~HtD~g~lTlL-------------~ 242 (356)
T 1gp6_A 189 ----VGLGL-EPDRLEKEVGGLEELLL-QMKINYYPKCPQPEL-------ALGVEAHTDVSALTFI-------------L 242 (356)
T ss_dssp ----HHTTS-CTTHHHHHTTHHHHCEE-EEEEEEECCCSSTTT-------CCSEEEECCCSSEEEE-------------E
T ss_pred ----HHcCC-CHHHHHHHhcccCCccc-eeeeeecCCCCCccc-------ccCcCCccCCCeEEEE-------------E
Confidence 88999 7889998886 3444 899999999976541 6899999999999999 6
Q ss_pred CCCCCceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeeccCCCCc-cccccC
Q 020496 245 PDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFSPYHAYT-VIKLTQ 323 (325)
Q Consensus 245 ~d~~~GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~~P~~d~-~i~p~~ 323 (325)
||+++||||+ ++|+|++|+|+||++||||||+||+||||+||||+|||+.++ ..+|||++||++|+.|+ +|+|.+
T Consensus 243 qd~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~---~~~R~Sia~F~~P~~d~~~i~pl~ 318 (356)
T 1gp6_A 243 HNMVPGLQLF-YEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNK---EKVRISWAVFCEPPKDKIVLKPLP 318 (356)
T ss_dssp ECSCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS---SCCEEEEEEEEECCTTTCEECCCG
T ss_pred EcCCCCeEEe-cCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCC---CCCEEEEEEeecCCCCCcEEeCCh
Confidence 7789999999 489999999999999999999999999999999999999887 47999999999999999 999986
Q ss_pred C
Q 020496 324 T 324 (325)
Q Consensus 324 ~ 324 (325)
.
T Consensus 319 ~ 319 (356)
T 1gp6_A 319 E 319 (356)
T ss_dssp G
T ss_pred h
Confidence 3
No 3
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.5e-66 Score=484.21 Aligned_cols=270 Identities=15% Similarity=0.183 Sum_probs=227.0
Q ss_pred CccceEEecccccCcc----hHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHH-hCCChhhhhhhccCCCCC
Q 020496 11 TLRTVTISYSELKDKN----ADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRL-ANLPEDVKKDLEDHHSRY 85 (325)
Q Consensus 11 ~~~ip~Id~~~l~~~~----~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~ 85 (325)
.+.||+|||+.|.+++ .+++++|.+||++ ||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~--~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~----- 75 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRD--TGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI----- 75 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHT--TSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-----
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHh--CCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-----
Confidence 4579999999997654 2588999999999 99999999999 899999999999 9999999999974
Q ss_pred cccccc-CcccccCC------CCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCC-CchhHHHHHHHHHHHHHH
Q 020496 86 NFGWSH-GKEKLESG------NPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHS-ALPELEVAFKALGKLIVD 157 (325)
Q Consensus 86 ~~GY~~-~~e~~~~g------~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~-~~~~f~~~~~~y~~~~~~ 157 (325)
+||.+ +.|.+..+ ...||||+|+++. +.+.+++......+ +..+|+||+. .+|+||+++++|+++|.+
T Consensus 76 -~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~--~~~~~~p~~~~~~~-~~~~n~wP~~~~~p~fr~~~~~y~~~~~~ 151 (331)
T 1odm_A 76 -RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNP--NFTPDHPRIQAKTP-THEVNVWPDETKHPGFQDFAEQYYWDVFG 151 (331)
T ss_dssp -TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCT--TCCTTSHHHHTTCT-TCCCCCCCCTTTSTTHHHHHHHHHHHHHH
T ss_pred -cCCCcCCccccccccccccCCCCChhheEeccc--CCcccccccccccc-ccCCCCCCCCCCChHHHHHHHHHHHHHHH
Confidence 68986 55544332 3446999999986 33434442222222 3468999973 289999999999999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCcchhHHHHhhcCCCccee--eccCC------C---CCCCCcccCCCCCCCcccccccccc
Q 020496 158 VGLMLAYHCDQYVSKGMKMKENEGLEQILLHSRCHKGR--LLYYF------P---AQQSNCIRDGDSMSSWCGWHTDHAS 226 (325)
Q Consensus 158 l~~~l~~~l~~~i~~~Lgl~~~~~~~~~~~~~~~~~lr--l~~Yp------p---~~~~~~~~~~~~~~~~~~~HtD~g~ 226 (325)
|+..|+++|+ ++||+ ++++|++.+.++.+ .|| ++||| | ++.++ ...+|+++|||+|+
T Consensus 152 l~~~ll~~la----~~Lgl-~~~~f~~~~~~~~~-~lr~~l~~YP~~~~~~p~~~~~~~~------~~~~g~~~HtD~g~ 219 (331)
T 1odm_A 152 LSSALLKGYA----LALGK-EENFFARHFKPDDT-LASVVLIRYPYLDPYPEAAIKTAAD------GTKLSFEWHEDVSL 219 (331)
T ss_dssp HHHHHHHHHH----HHTTS-CTTTTGGGCCTTTC-CCEEEEEEECCCSSCCGGGCEECTT------SCEEEEEEECCSSS
T ss_pred HHHHHHHHHH----HHhCC-CHHHHHHHhcCcHH-HHHHHHhhCCCcccccccccCCCcc------ccccccccccCCCe
Confidence 9999999975 88999 78899888776555 899 99999 6 43322 11689999999999
Q ss_pred cccccccccccCCCccCCCCCCCceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeE
Q 020496 227 LTGLTCGMFTKDGTVIPCPDSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFRED 306 (325)
Q Consensus 227 lTlL~~~~~~~~~~~~~~~d~~~GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~S 306 (325)
|||| +||+++||||++++| |++|+|+||++|||+||+||+||||+||||+|||+++. .+|||
T Consensus 220 lTlL-------------~qd~v~GLQV~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~----~~R~S 281 (331)
T 1odm_A 220 ITVL-------------YQSNVQNLQVETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVN----AERQS 281 (331)
T ss_dssp EEEE-------------EECSSCCEEEEETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCC----SCEEE
T ss_pred EEEE-------------eeCCCCCEEEEcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCCC----CCEEE
Confidence 9999 677899999998889 99999999999999999999999999999999999753 79999
Q ss_pred EEeeccCCCCccccccCC
Q 020496 307 FGKFSPYHAYTVIKLTQT 324 (325)
Q Consensus 307 i~~F~~P~~d~~i~p~~~ 324 (325)
++||++|+.|++|+|.+.
T Consensus 282 ia~F~~P~~d~~i~pl~~ 299 (331)
T 1odm_A 282 LPFFVNLGYDSVIDPFDP 299 (331)
T ss_dssp EEEEECCCTTCBCCCCCT
T ss_pred EEEEEcCCCCCEEeCCCc
Confidence 999999999999999864
No 4
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1.9e-65 Score=477.05 Aligned_cols=258 Identities=13% Similarity=0.088 Sum_probs=223.0
Q ss_pred ccceEEecccccCc-chHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCCChhhhhhhccCCCCCccccc
Q 020496 12 LRTVTISYSELKDK-NADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWS 90 (325)
Q Consensus 12 ~~ip~Id~~~l~~~-~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~ 90 (325)
..||+|||+.|... +.+++++|.+||++ ||||||+||||+.++++++++.+++||+||.|+|+++... .+||.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~--~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~ 75 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACEN--WGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALE 75 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHH--TSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHh--CCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCC
Confidence 36999999998642 45789999999999 9999999999999999999999999999999999998643 35888
Q ss_pred c-CcccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020496 91 H-GKEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQY 169 (325)
Q Consensus 91 ~-~~e~~~~g~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~l~~~l~~~l~~~ 169 (325)
+ +.|. +.. ||+|.|+++. .|. ..+|.||+ .+|+||+++++|+++|.+|+..|+++|+
T Consensus 76 ~~~~e~---~~~-d~ke~~~~~~---~p~------------~~~~~wP~-~~~~fr~~~~~y~~~~~~l~~~ll~~la-- 133 (319)
T 1w9y_A 76 GVQAEV---TDM-DWESTFFLKH---LPI------------SNISEVPD-LDEEYREVMRDFAKRLEKLAEELLDLLC-- 133 (319)
T ss_dssp TCCCCG---GGC-CCCEEEEEEE---ESC------------CGGGGCTT-CCHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred cccccC---CCC-Chhhheeeec---CCc------------cccccccc-chhHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 6 3332 334 5999999874 221 13578998 4899999999999999999999999975
Q ss_pred HHhcCCCCcchhHHHHhhc--CCCcceeeccCCCCCCCCcccCCCCCCCcccccccccccccccccccccCCCccCCCC-
Q 020496 170 VSKGMKMKENEGLEQILLH--SRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCPD- 246 (325)
Q Consensus 170 i~~~Lgl~~~~~~~~~~~~--~~~~~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~~~~~~~~~d- 246 (325)
++||+ ++++|++.+.. ...+.||++||||++.++. .+|+++|||+|+|||| +||
T Consensus 134 --~~Lgl-~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~-------~~g~~~HtD~g~lTlL-------------~qd~ 190 (319)
T 1w9y_A 134 --ENLGL-EKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDL-------IKGLRAHTDAGGIILL-------------FQDD 190 (319)
T ss_dssp --HHHTC-CTTHHHHHHHTTTCCEEEEEEEECCCCSCGGG-------GSSCCCBCCSSSEEEE-------------EESS
T ss_pred --HHcCC-CHHHHHHHhcCcCCccceeEEEecCCCccccc-------ccccccccCCCceEEE-------------EecC
Confidence 88999 78899988864 2233899999999986542 6899999999999999 664
Q ss_pred CCCceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeeccCCCCccccccCC
Q 020496 247 SAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFSPYHAYTVIKLTQT 324 (325)
Q Consensus 247 ~~~GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~~P~~d~~i~p~~~ 324 (325)
+++||||+ ++|+|++|+|.||++||||||+||+||||+||||+|||+.++ ..+|||++||++|+.|++|+|.+.
T Consensus 191 ~v~GLQV~-~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~HRVv~~~---~~~R~Sia~F~~p~~d~~i~pl~~ 264 (319)
T 1w9y_A 191 KVSGLQLL-KDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQK---DGARMSLASFYNPGSDAVIYPAPA 264 (319)
T ss_dssp SCCCEEEE-ETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCS---SSCCEEEEEEEECCTTCEECCCGG
T ss_pred CCCeeeEe-eCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccceecCCC---CCCceEEEEEecCCCCCeEeCchh
Confidence 79999997 589999999999999999999999999999999999999886 479999999999999999999863
No 5
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=7.4e-64 Score=458.58 Aligned_cols=255 Identities=16% Similarity=0.117 Sum_probs=209.8
Q ss_pred ccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCCChhhhhhhccCCCCCcccccc
Q 020496 12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLPEDVKKDLEDHHSRYNFGWSH 91 (325)
Q Consensus 12 ~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~GY~~ 91 (325)
+.||+|||++. +++++|.+||++ ||||||+||||+.++++++++.+++||+| |+|+++.... ..++||.+
T Consensus 2 ~~IPvIDls~~-----~~~~~l~~A~~~--~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~-~~~~GY~~ 71 (280)
T 3on7_A 2 MKLETIDYRAA-----DSAKRFVESLRE--TGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNR-ETHDGFFP 71 (280)
T ss_dssp --CCEEETTST-----THHHHHHHHHHH--HSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCT-TTCCEEEC
T ss_pred CCCCEEECCCh-----hHHHHHHHHHHh--CCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCC-CCCCcccc
Confidence 47999999874 357999999998 99999999999999999999999999997 8999987653 45799987
Q ss_pred -C-cccccCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 020496 92 -G-KEKLESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYHCDQY 169 (325)
Q Consensus 92 -~-~e~~~~g~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~l~~~l~~~l~~~ 169 (325)
+ .|........|+||.|.+. .||+ .+|+||+++++|+++|.+|+..|+++|+
T Consensus 72 ~~~~e~~~~~~~~D~kE~~~~~-----------------------p~~~-~p~~fr~~~~~y~~~~~~l~~~ll~~la-- 125 (280)
T 3on7_A 72 ASISETAKGHTVKDIKEYYHVY-----------------------PWGR-IPDSLRANILAYYEKANTLASELLEWIE-- 125 (280)
T ss_dssp CC--------CCCCSCEEEEEC-----------------------TTSC-CCGGGHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred CccccccCCCCcccHHHHHhcC-----------------------CCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 3 3444322345699988764 1554 3689999999999999999999999975
Q ss_pred HHhcCCCCc-chh---HHHHhhcCCCcceeeccCCCCCCCCcccCCCCCCCcccccccccccccccccccccCCCccCCC
Q 020496 170 VSKGMKMKE-NEG---LEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVIPCP 245 (325)
Q Consensus 170 i~~~Lgl~~-~~~---~~~~~~~~~~~~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~~~~~~~~~ 245 (325)
++||++. +.+ |.+.+.++..+.||++||||++.++. ...+|+++|||+|+|||| +|
T Consensus 126 --~~Lgl~~~~~~~~~~~~~~~~~~~~~lr~~~YP~~~~~~~-----~~~~g~~~HtD~g~lTlL-------------~q 185 (280)
T 3on7_A 126 --TYSPDEIKAKFSIPLPEMIANSHKTLLRILHYPPMTGDEE-----MGAIRAAAHEDINLITVL-------------PT 185 (280)
T ss_dssp --HTSCHHHHTTCSSCHHHHHTTCSSCEEEEEEECCCCTTCC-----CCSEEEEEECCCSSEEEE-------------EC
T ss_pred --HHcCCcchhhhhHHHHHHhcCCccceEEEEECCCCCCccc-----cCcccccCCCCCCeEEEE-------------Ee
Confidence 7888621 233 56666665534899999999986541 126899999999999999 77
Q ss_pred CCCCceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCC-CCceeEEEeeccCCCCcccccc
Q 020496 246 DSAAGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIH-FVFREDFGKFSPYHAYTVIKLT 322 (325)
Q Consensus 246 d~~~GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~-~~~R~Si~~F~~P~~d~~i~p~ 322 (325)
|+++||||++++|+|++|+|+||++|||+||+||+||||+||||+|||+++++.. ..+|||++||++|+.|++|+|.
T Consensus 186 d~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p~ 263 (280)
T 3on7_A 186 ANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSER 263 (280)
T ss_dssp CSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSSS
T ss_pred cCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECCC
Confidence 8999999998899999999999999999999999999999999999999886432 5789999999999999999874
No 6
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.2e-64 Score=470.49 Aligned_cols=257 Identities=14% Similarity=0.091 Sum_probs=206.8
Q ss_pred ccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCCC-hhhhhhhccCCCCCccccc
Q 020496 12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANLP-EDVKKDLEDHHSRYNFGWS 90 (325)
Q Consensus 12 ~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~GY~ 90 (325)
..||+|||+.|.+++.+ ++|.+||++ ||||||+||||+.++++++++.+++||+|| .|+|+++.......++||.
T Consensus 3 ~~iPvIDls~l~~~~~~--~~l~~A~~~--~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~ 78 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQ--DEFRRCLRD--KGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFT 78 (311)
T ss_dssp CCCCEEEHHHHHTTCSH--HHHHHHHHH--TCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEE
T ss_pred CCCcEEEchhhcCCCHH--HHHHHHHHh--CcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCcee
Confidence 46999999999765443 399999999 999999999999999999999999999999 9999999877655689999
Q ss_pred c-Ccccc----cCCCCCCcccceecCCCCCCCCCchhhhhcCCCCCCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHH
Q 020496 91 H-GKEKL----ESGNPDMLKGSFYANPLLDVPTTETHLIERYPSYCGSNIWPHSALPELEVAFKALGKLIVDVGLMLAYH 165 (325)
Q Consensus 91 ~-~~e~~----~~g~~~d~kE~f~~~~~~~~p~~~~~~~~~~~~~~~~n~wP~~~~~~f~~~~~~y~~~~~~l~~~l~~~ 165 (325)
+ +.|.+ ......||+|+|+++. .+|.|| +|+|++.+++|+++|.+|+..|+++
T Consensus 79 ~~~~e~~~~~~~~~~~~d~~E~~~~~~-------------------~~n~wP---~~~fr~~~~~y~~~~~~l~~~ll~~ 136 (311)
T 1dcs_A 79 GLESESTAQITNTGSYSDYSMCYSMGT-------------------ADNLFP---SGDFERIWTQYFDRQYTASRAVARE 136 (311)
T ss_dssp EC-----------------CEEEEECS-------------------SSCCCS---CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccccccccCCCCCCCcceeeeccC-------------------CCCCCC---ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7 55543 2122346999999984 157899 7999999999999999999999999
Q ss_pred HHHHHHhcCCCC---cchhHHHHhhcCCCcceeeccCCCCCCCCcccCCCCCCCcccccccccccccccccccccCCCcc
Q 020496 166 CDQYVSKGMKMK---ENEGLEQILLHSRCHKGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHASLTGLTCGMFTKDGTVI 242 (325)
Q Consensus 166 l~~~i~~~Lgl~---~~~~~~~~~~~~~~~~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~~~~~~ 242 (325)
|+ ++||++ ++++|++. .+ .||++||||++.++. .....+|+++|||+|+||||
T Consensus 137 la----~~Lgl~~~~~~~~f~~~----~~-~lrl~~YPp~~~~~~---~~~~~~g~~~HtD~g~lTlL------------ 192 (311)
T 1dcs_A 137 VL----RATGTEPDGGVEAFLDC----EP-LLRFRYFPQVPEHRS---AEEQPLRMAPHYDLSMVTLI------------ 192 (311)
T ss_dssp HH----HHTTCCCTTCHHHHHSC----CC-EEEEEEECC--------------CCEEEEEECSSEEEE------------
T ss_pred HH----HHcCCCCcCcHhHHhhc----ch-hhheecCCCCCcccc---cCccccccccccCCCeEEEE------------
Confidence 76 788883 35566543 33 899999999976531 11125789999999999999
Q ss_pred CCCC-CCCc---eEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcC--CCCceeEEEeeccCCCC
Q 020496 243 PCPD-SAAG---LYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSII--HFVFREDFGKFSPYHAY 316 (325)
Q Consensus 243 ~~~d-~~~G---LqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~--~~~~R~Si~~F~~P~~d 316 (325)
+|| +++| |||++ +|+|++|+|+||++||||||+||+||||+||||+|||+.++.. ...+|||++||++|+.|
T Consensus 193 -~qd~~v~G~~~LqV~~-~g~W~~V~p~pg~lvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d 270 (311)
T 1dcs_A 193 -QQTPCANGFVSLQAEV-GGAFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNAD 270 (311)
T ss_dssp -EEECCTTCCCCEEEEE-TTEEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTT
T ss_pred -ecCCCCCCceeEEEEe-CCEEEeCcCCCCeEEEEHHHHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCC
Confidence 677 8999 99998 8999999999999999999999999999999999999987631 14789999999999999
Q ss_pred cccc
Q 020496 317 TVIK 320 (325)
Q Consensus 317 ~~i~ 320 (325)
++|+
T Consensus 271 ~~i~ 274 (311)
T 1dcs_A 271 FTFS 274 (311)
T ss_dssp CEEE
T ss_pred cEEe
Confidence 9998
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=92.35 E-value=0.14 Score=44.88 Aligned_cols=48 Identities=10% Similarity=-0.018 Sum_probs=35.0
Q ss_pred CceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeecc
Q 020496 249 AGLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFSP 312 (325)
Q Consensus 249 ~GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~~ 312 (325)
|.|.+.+..+ =..|+|..|.+|+.-. .++|+|.... ...||+++.+++
T Consensus 147 Getvf~~~~~-~~~V~P~~G~~v~F~s------------~~lH~v~pV~---~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 147 GELVIQDTYG-QQSIKLSAGSLVLYPS------------SSLHQVTPVL---SGERTAAFMWLQ 194 (243)
T ss_dssp CCEEEEETTE-EEEECCCTTCEEEEET------------TSEEEECCEE---EECEEEEEEEEE
T ss_pred ceEEEeeCCC-cEEEecCCCEEEEECC------------CCeEcCcccc---ccCEEEEEEehh
Confidence 4476665333 4679999999998642 3689998765 368999998865
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=89.64 E-value=0.72 Score=39.48 Aligned_cols=44 Identities=9% Similarity=-0.135 Sum_probs=34.4
Q ss_pred CcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeeccCCC
Q 020496 258 DQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFSPYHA 315 (325)
Q Consensus 258 g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~~P~~ 315 (325)
..+..|.|.+|.+||.-+. -.|+|....+ ...|+||+|-+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~--~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMA--EEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCS--SSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCC--CCCEEEEEEEeecCC
Confidence 4577899999999998763 3799987664 479999999988754
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=87.69 E-value=0.89 Score=39.76 Aligned_cols=87 Identities=16% Similarity=0.116 Sum_probs=55.0
Q ss_pred ceeeccCCCCCCCCcccCCCCCCCccccccccc-----ccccccccccccCCCccCCC--CCCCceEEEcCC-CcEEEec
Q 020496 193 KGRLLYYFPAQQSNCIRDGDSMSSWCGWHTDHA-----SLTGLTCGMFTKDGTVIPCP--DSAAGLYIRTRT-DQIVKVV 264 (325)
Q Consensus 193 ~lrl~~Ypp~~~~~~~~~~~~~~~~~~~HtD~g-----~lTlL~~~~~~~~~~~~~~~--d~~~GLqV~~~~-g~W~~V~ 264 (325)
-+.+.+|++. .-...+|.|.. .+|+++ |+++ +++ ...|-|.+.+.+ +....|.
T Consensus 118 e~~~~~Y~~~------------G~~y~~H~D~~~~~~R~~T~vl---YLN~----~w~~~~~GG~l~~~~~~~~~~~~v~ 178 (247)
T 2hbt_A 118 KAMVACYPGN------------GTGYVRHVDNPNGDGRCVTCIY---YLNK----DWDAKVSGGILRIFPEGKAQFADIE 178 (247)
T ss_dssp CEEEEEECSS------------SCCEEEECSSCSCCSEEEEEEE---ECBT----TCCHHHHBCCEEECCTTCSSCEEEC
T ss_pred eEEEEEecCC------------CCcccccccCCCCCCceEEEEE---EeCC----CCCCCCCceeEEEecCCCCceEEEE
Confidence 4668889861 12356777762 467663 3322 122 123447887543 2578999
Q ss_pred cCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeecc
Q 020496 265 FREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFSP 312 (325)
Q Consensus 265 p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~~ 312 (325)
|..|.+|+.-.+. -.+|.|.... ..||||+..++
T Consensus 179 P~~grlv~F~s~~----------~~~H~V~p~~----~~R~sit~W~~ 212 (247)
T 2hbt_A 179 PKFDRLLFFWSDR----------RNPHEVQPAY----ATRYAITVWYF 212 (247)
T ss_dssp CBTTEEEEEECST----------TCCEEECCBS----SCEEEEEEEEE
T ss_pred cCCCEEEEEecCC----------CceeeeccCC----CEEEEEEEEEc
Confidence 9999999976431 1689997643 79999987654
No 10
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=83.02 E-value=2 Score=39.52 Aligned_cols=40 Identities=13% Similarity=0.228 Sum_probs=31.9
Q ss_pred ceEEEcCCCcEEEeccCCCeEEEEchhHHHHhhCCeeecc
Q 020496 250 GLYIRTRTDQIVKVVFREDEIAYQIGETTEILSRSYLCAT 289 (325)
Q Consensus 250 GLqV~~~~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst 289 (325)
=+.+..++|.++.+...+|+++|.-|+.-..|.-|.-+-.
T Consensus 235 ~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~~~~ 274 (345)
T 3tht_A 235 VMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGITCRK 274 (345)
T ss_dssp EEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEECCCS
T ss_pred eEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCCccc
Confidence 3555555678999999999999999999999976655543
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=70.23 E-value=20 Score=30.06 Aligned_cols=44 Identities=11% Similarity=0.032 Sum_probs=32.4
Q ss_pred CcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEee
Q 020496 258 DQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKF 310 (325)
Q Consensus 258 g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F 310 (325)
+..+.+...+|+++|.-|++=..|. |.|..... ....|+|+.|=
T Consensus 157 ~~~~~~~L~~GsllvM~g~~q~~w~--------H~Ip~~~~-~~~~RislTFR 200 (204)
T 3s57_A 157 VAVVRLPLAHGSLLMMNHPTNTHWY--------HSLPVRKK-VLAPRVNLTFR 200 (204)
T ss_dssp CCCEEEEECTTEEEEEETTHHHHEE--------EEECCCTT-CCSCEEEEEEE
T ss_pred CceEEEECCCCCEEEECchhhheeE--------eeccccCC-CCCCEEEEEee
Confidence 3578999999999999998877775 55533221 13689999873
No 12
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=68.93 E-value=5.1 Score=34.04 Aligned_cols=46 Identities=13% Similarity=0.201 Sum_probs=32.4
Q ss_pred CCcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcC----CCCceeEEEeec
Q 020496 257 TDQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSII----HFVFREDFGKFS 311 (325)
Q Consensus 257 ~g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~----~~~~R~Si~~F~ 311 (325)
++..+.+...+|+++|.-|+.- .| .|.|...... ....|+|+.|=.
T Consensus 152 ~~~~~~i~L~~GsllvM~G~~r-~~--------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 152 NDPLKRLLLEHGDVVVWGGESR-LF--------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp TSCCEEEEECTTCEEEECGGGT-TC--------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred CCceEEEECCCCCEEEECchHH-ce--------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 4668899999999999999762 22 4777554321 124699998854
No 13
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=66.93 E-value=16 Score=31.48 Aligned_cols=45 Identities=13% Similarity=-0.049 Sum_probs=33.2
Q ss_pred CcEEEeccCCCeEEEEchhHHHHhhCCeeecccceeecCCcCCCCceeEEEeec
Q 020496 258 DQIVKVVFREDEIAYQIGETTEILSRSYLCATPHCVRVLSIIHFVFREDFGKFS 311 (325)
Q Consensus 258 g~W~~V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~~~~~~~~R~Si~~F~ 311 (325)
+..+.+...+|+++|.-|++=..|.-|.-+.. .. ...|+|+.|=.
T Consensus 184 ~~~~~i~L~~gsllvM~G~~r~~w~H~I~~~~------~~---~~~RIsLTfR~ 228 (238)
T 2iuw_A 184 VERVKIPLDHGTLLIMEGATQADWQHRVPKEY------HS---REPRVNLTFRT 228 (238)
T ss_dssp CCEEEEEECTTCEEEEEETHHHHEEEEECCCS------SC---CCCEEEEEEEC
T ss_pred CceEEEEcCCCCEEEEChhhhCccEecCCCcC------CC---CCCEEEEEeee
Confidence 46899999999999999998777764443211 11 47899998854
No 14
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=66.17 E-value=5.5 Score=33.80 Aligned_cols=47 Identities=9% Similarity=-0.217 Sum_probs=33.3
Q ss_pred EEEeccCCCeEEEEchhHHHHhhCCee-ecccceeecCCcCCCCceeEEEeeccC
Q 020496 260 IVKVVFREDEIAYQIGETTEILSRSYL-CATPHCVRVLSIIHFVFREDFGKFSPY 313 (325)
Q Consensus 260 W~~V~p~~g~lvVnvGd~l~~~TnG~~-kst~HRV~~~~~~~~~~R~Si~~F~~P 313 (325)
-+.|.|..|.+|+.-- ...+|.. ..++|+|.... ...||++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~---~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTL---KGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEE---ESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccc---cceEEEEEEeEEc
Confidence 3789999998888543 1233433 57899997764 3689999888763
No 15
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=63.80 E-value=10 Score=32.28 Aligned_cols=45 Identities=13% Similarity=-0.101 Sum_probs=30.7
Q ss_pred EEeccCCCeEEEEchhHHHHhhCCee-ecccceeecCCcCCCCceeEEEeecc
Q 020496 261 VKVVFREDEIAYQIGETTEILSRSYL-CATPHCVRVLSIIHFVFREDFGKFSP 312 (325)
Q Consensus 261 ~~V~p~~g~lvVnvGd~l~~~TnG~~-kst~HRV~~~~~~~~~~R~Si~~F~~ 312 (325)
+.|.|..|.+|+.-. ...+|.. ..++|+|.... ...||++..+++
T Consensus 166 ~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~---~G~K~v~~~W~~ 211 (216)
T 3itq_A 166 LSVHPRKGMAVYFEY----FYQDQSLNELTLHGGAPVT---KGEKWIATQWVR 211 (216)
T ss_dssp EEECCCTTCEEEEEC----CCSSHHHHHTTCEEECCEE---ESCEEEEEEEEE
T ss_pred CEEecCCCeEEEEec----cCCCCCCCCccccccceec---cccEEEEEeeEe
Confidence 789999998887543 1112221 46899998665 368999888765
No 16
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=56.13 E-value=13 Score=35.34 Aligned_cols=54 Identities=7% Similarity=-0.010 Sum_probs=41.1
Q ss_pred CccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhC
Q 020496 11 TLRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLAN 69 (325)
Q Consensus 11 ~~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 69 (325)
..-||+|+|+++.++. +.+...+.+++ .|++.|+|+ |+.+...+..+.+.+|.+
T Consensus 98 ~~~iP~i~f~di~~~~--~s~~~~~~ir~--rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGH--VTAEQREQIKR--RGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CCSSCEEEHHHHHHTC--CCHHHHHHHHH--HSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCC--CCHHHHHHHHh--ccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 3479999999997543 12344556666 899999988 899988888888888864
No 17
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=52.76 E-value=8.6 Score=35.68 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=40.9
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLANL 70 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 70 (325)
.+|.|||+++.. +.+.+.++.+|+.+ +|++.+.|.++..+ ...+.+++|-.+
T Consensus 122 ~~~~~~~~~~l~-~d~~~~~~~~~l~~--~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLR-YDEHAYKWLSTLKK--VGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHH-CHHHHHHHHHHHHH--HSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhc-CHHHHHHHHHHHHh--cCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999999874 35677899999998 99999999998765 444566676544
No 18
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=50.50 E-value=32 Score=30.28 Aligned_cols=35 Identities=9% Similarity=0.073 Sum_probs=28.8
Q ss_pred HHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhC
Q 020496 32 KIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLAN 69 (325)
Q Consensus 32 ~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 69 (325)
+..+.+.+ .||+.|.|. ++.+.++++.+...++++
T Consensus 26 e~~~~f~~--dGyvvl~~~-l~~e~v~~l~~~~~~~~~ 60 (308)
T 2a1x_A 26 EQRKFYEE--NGFLVIKNL-VPDADIQRFRNEFEKICR 60 (308)
T ss_dssp THHHHHHH--HSEEEETTC-SCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHh--CCEEEccCC-CCHHHHHHHHHHHHHHHh
Confidence 45567777 899999876 899999999998888764
No 19
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=45.43 E-value=13 Score=32.47 Aligned_cols=50 Identities=8% Similarity=-0.033 Sum_probs=36.4
Q ss_pred ccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHh
Q 020496 12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLA 68 (325)
Q Consensus 12 ~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 68 (325)
+.|+-||+++.. +++..++|.+++.+ +|++.+.|.+++.+. ..+.++.|-
T Consensus 16 aei~gvdl~~~l--~~~~~~~l~~~l~~--~Gvv~frg~~~~~~~---~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPL--SDNQFEQLYHAVLR--HQVVFLRDQAITPQQ---QRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCC--CHHHHHHHHHHHHH--HSEEEECSCCCCHHH---HHHHHHTTS
T ss_pred EEEECCCcCccC--CHHHHHHHHHHHHH--CCEEEECCCCCCHHH---HHHHHHHhC
Confidence 357778888744 34568899999998 999999999887653 344555553
No 20
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=43.34 E-value=13 Score=31.14 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=28.4
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi 52 (325)
.+|++++... +..++++.+.+++++ .-.+.|.|||+
T Consensus 125 ~v~~~~y~~~--g~~~la~~i~~~l~~--~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRP--GSPELAKAVVEAMLK--HNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCT--TCHHHHHHHHHHTSS--CSEEEETTTEE
T ss_pred CeEEEcCCCC--CcHHHHHHHHHHhcc--CCEEEEcCCCc
Confidence 5888887653 356788999999986 56888999994
No 21
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=42.52 E-value=13 Score=32.77 Aligned_cols=51 Identities=20% Similarity=0.160 Sum_probs=38.1
Q ss_pred ccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHhC
Q 020496 12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLAN 69 (325)
Q Consensus 12 ~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 69 (325)
+.|.-||+++.. +++..++|.+|+.+ +|++.+.|.+++.+ +..+.++.|=.
T Consensus 14 aei~gvdl~~~l--~~~~~~~l~~~l~~--~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDI--SAEERDAIEQALLQ--HQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCC--CHHHHHHHHHHHHH--HSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccC--CHHHHHHHHHHHHH--CCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 457778888743 35677999999998 99999999988765 44456666643
No 22
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=39.37 E-value=21 Score=30.54 Aligned_cols=36 Identities=6% Similarity=-0.009 Sum_probs=28.4
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi 52 (325)
.+|+++|... +..++++++.+++++ .-.+.+.|||+
T Consensus 161 ~v~~~~y~~~--g~~ela~~i~~~l~~--~~avll~nHG~ 196 (238)
T 1pvt_A 161 GISVVEFEKP--GSVELGLKTVEKSEG--KDAVLWDKHGV 196 (238)
T ss_dssp CCEEECCCST--TCHHHHHHHHHHTSS--CSEEEETTSCE
T ss_pred CceEecCCCC--CcHHHHHHHHHHhcc--CCEEEEcCCCc
Confidence 5888888543 456788999999986 66788999995
No 23
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.23 E-value=20 Score=31.66 Aligned_cols=49 Identities=10% Similarity=-0.058 Sum_probs=34.9
Q ss_pred ceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCC-CChHHHHHHHHHhhHHhC
Q 020496 14 TVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVP-GFSSLRQNLLHLAPRLAN 69 (325)
Q Consensus 14 ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhg-i~~~~~~~~~~~~~~fF~ 69 (325)
|+-||+++.. +++..++|.+++.+ +|++.+.|.+ ++.+ ...+.++.|-.
T Consensus 28 i~gvdl~~~l--~~~~~~~l~~~l~~--~Gvv~fRg~~~l~~~---~~~~~~~~fG~ 77 (301)
T 1oih_A 28 IRGVKLSPDL--DAATVEAIQAALVR--HKVIFFRGQTHLDDQ---SQEGFAKLLGE 77 (301)
T ss_dssp EESCCCCTTC--CHHHHHHHHHHHHH--HSEEEECCCTTCCHH---HHHHHHHTTSC
T ss_pred EeCCCccccC--CHHHHHHHHHHHHH--CCEEEECCCCCCCHH---HHHHHHHHhCC
Confidence 5556666643 34567899999998 9999999998 8754 44455566543
No 24
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=38.17 E-value=19 Score=30.30 Aligned_cols=36 Identities=8% Similarity=0.024 Sum_probs=27.8
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi 52 (325)
.||++++... +..++++.+.+++++ .-.+.|.|||+
T Consensus 122 ~ip~~~y~~~--g~~~la~~i~~~l~~--~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATF--GTRELSEHVALALKN--RKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCT--TCHHHHHHHHHHTSS--CSEEEETTTEE
T ss_pred CcceeeCCCC--CcHHHHHHHHHHhcc--CCEEEEcCCCc
Confidence 5788887643 345788899999986 56888999994
No 25
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=33.65 E-value=25 Score=29.20 Aligned_cols=51 Identities=4% Similarity=0.010 Sum_probs=34.2
Q ss_pred cceEE-ecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC--Ch------HHHHHHHHHhhHH
Q 020496 13 RTVTI-SYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG--FS------SLRQNLLHLAPRL 67 (325)
Q Consensus 13 ~ip~I-d~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi--~~------~~~~~~~~~~~~f 67 (325)
.||++ +|... +..++++.+.+++++ .-.+.|.|||+ -- +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~--g~~ela~~i~~~l~~--~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVS--ATEEAALSVAEALRE--HRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCS--SSHHHHHHHHHHHHH--CSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCC--CcHHHHHHHHHHhCc--CCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 57888 77543 346788889999975 55788999994 22 4555655555443
No 26
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=31.47 E-value=32 Score=30.58 Aligned_cols=52 Identities=12% Similarity=-0.013 Sum_probs=37.9
Q ss_pred ccceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcC-CCChHHHHHHHHHhhHHhCC
Q 020496 12 LRTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDV-PGFSSLRQNLLHLAPRLANL 70 (325)
Q Consensus 12 ~~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nh-gi~~~~~~~~~~~~~~fF~l 70 (325)
+.|.-||+++.. +++..++|.+|+.+ +|++.+.|. .++.+ ...+.++.|=.+
T Consensus 20 aei~gvdl~~~L--~d~~~~~l~~al~~--~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDL--DDATVEQIRRALLT--HKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTC--CHHHHHHHHHHHHH--HSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccC--CHHHHHHHHHHHHH--CCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 456667777432 45678999999998 999999998 77765 445667776443
No 27
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=31.47 E-value=25 Score=30.77 Aligned_cols=36 Identities=3% Similarity=-0.114 Sum_probs=28.2
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi 52 (325)
.||+++|.. .+..++++.+.+++++ .-.+.+.|||+
T Consensus 179 ~v~v~~y~~--~g~~ela~~i~~~l~~--~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMV--PGTDAIGQATAQEMQK--HSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCC--SSSHHHHHHHHHHHTT--CSEEEETTTEE
T ss_pred ceeEecCCC--CCCHHHHHHHHHHHcc--CCEEEEcCCCc
Confidence 578887753 3456888999999987 66888999994
No 28
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=29.18 E-value=19 Score=26.17 Aligned_cols=30 Identities=17% Similarity=0.081 Sum_probs=20.6
Q ss_pred eccCCCeEEEEchhHHHHhhCCeeecccceeecC
Q 020496 263 VVFREDEIAYQIGETTEILSRSYLCATPHCVRVL 296 (325)
Q Consensus 263 V~p~~g~lvVnvGd~l~~~TnG~~kst~HRV~~~ 296 (325)
||.-+.-+.|-+ ..-|||+||||+.-|+..
T Consensus 38 vpigesrftisl----rktsngrykstlklvvpv 67 (131)
T 2vf9_A 38 VPIGESRFTISL----RKTSNGRYKSTLKLVVPV 67 (131)
T ss_dssp SCSSCEEEEEEE----EECTTSEEEEEEEEEEEE
T ss_pred cccccceEEEEE----EecCCCceeeeEEEEEEE
Confidence 444444455543 467999999999988653
No 29
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=29.03 E-value=27 Score=30.53 Aligned_cols=38 Identities=11% Similarity=0.149 Sum_probs=28.5
Q ss_pred cceEEeccc-------ccCcchHHHHHHHHhhCCCCceEEEEEcCCC
Q 020496 13 RTVTISYSE-------LKDKNADLSMKIEQGFGPNGLGILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~-------l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi 52 (325)
.||++++.. +..+++++.+.|.+++++ .-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~--~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGS--QTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTT--SSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhcc--CCEEEEcCCce
Confidence 588888653 122456888999999987 56888999994
No 30
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=28.39 E-value=19 Score=31.11 Aligned_cols=45 Identities=11% Similarity=0.047 Sum_probs=32.4
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCCChHHHHHHHHHhhHHh
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPGFSSLRQNLLHLAPRLA 68 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 68 (325)
.|+-||++++ + .++|.+++.+ +|++.+.|.+++.+ ...+.++.|-
T Consensus 18 ~i~g~dl~~~-~-----~~~l~~~l~~--~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 18 YIDHRDFLEA-K-----TETIKNLLMR--QGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp EECHHHHHHS-C-----HHHHHHHHHH--HCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEECCCcccC-C-----HHHHHHHHHH--CCEEEECCCCCCHH---HHHHHHHHhC
Confidence 3555677776 3 6889999988 99999999988654 4444555553
No 31
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=28.32 E-value=34 Score=29.98 Aligned_cols=50 Identities=6% Similarity=0.046 Sum_probs=33.7
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCceEEEEEcCCC--ChHHHHHHHHHhh
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLGILSVTDVPG--FSSLRQNLLHLAP 65 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~GFf~l~nhgi--~~~~~~~~~~~~~ 65 (325)
.||+++|..+. .+.++.++|.+++++ .-.+.|.|||+ --+.+++++..+.
T Consensus 156 ~v~~~~y~~~~-~~~el~~~i~~~l~~--~~avlL~nHG~~~~G~tl~eA~~~~~ 207 (273)
T 3ocr_A 156 RVAYHGYEGIA-LDLSERERLVADLGD--KSVMILRNHGLLTGGVSVEHAIQQLH 207 (273)
T ss_dssp TEEEECCCCSS-CCHHHHHHHHHHHTT--CSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred CEEEECCCCCC-CCHHHHHHHHHHhCc--CCEEEEcCCceEEecCCHHHHHHHHH
Confidence 57888887543 256788899999987 66888999994 2223444444443
No 32
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=25.40 E-value=22 Score=29.58 Aligned_cols=35 Identities=9% Similarity=-0.027 Sum_probs=25.1
Q ss_pred cceEEecccccCcchHHHHHHHHhhCCCCce---EEEEEcCCC
Q 020496 13 RTVTISYSELKDKNADLSMKIEQGFGPNGLG---ILSVTDVPG 52 (325)
Q Consensus 13 ~ip~Id~~~l~~~~~~~~~~l~~A~~~~~~G---Ff~l~nhgi 52 (325)
.||++++. .+.+++++.+.+++++ .+ .+.|.|||+
T Consensus 139 ~vp~~~~~---~g~~~La~~i~~~l~~--~~~~~avll~nHG~ 176 (208)
T 2irp_A 139 KIPIFPNE---QNIPLLAKEVENYFKT--SEDKYGFLIRGHGL 176 (208)
T ss_dssp EEEEECCC---SCHHHHHHHHHHHHHH--CSCCSCEEETTTEE
T ss_pred ceeeecCC---CCHHHHHHHHHHHHhc--CCCceEEEEcCCCC
Confidence 67777763 3455778888888864 32 688899994
No 33
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=22.48 E-value=86 Score=28.09 Aligned_cols=40 Identities=3% Similarity=-0.162 Sum_probs=30.6
Q ss_pred HHHHHHHHhhCCCCceEEEEEcCCC----ChHHHHHHHHHhhHHhC
Q 020496 28 DLSMKIEQGFGPNGLGILSVTDVPG----FSSLRQNLLHLAPRLAN 69 (325)
Q Consensus 28 ~~~~~l~~A~~~~~~GFf~l~nhgi----~~~~~~~~~~~~~~fF~ 69 (325)
++.+++.+.++. -||+.=.+||| +.+-++.+++++++|++
T Consensus 305 ~i~~~v~~~l~~--~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 305 KIKAEAKEALEG--GIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHT--TCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhC--CCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 455566666665 68776679986 57889999999999975
Done!