Query 020497
Match_columns 325
No_of_seqs 139 out of 237
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 03:52:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020497.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020497hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1vf6c_ a.194.1.1 (C:) Maguk p 37.0 8.1 0.00059 25.7 2.0 18 294-311 29-46 (51)
2 d1yu8x1 a.14.1.1 (X:42-76) Vil 14.7 12 0.00085 23.3 -0.7 12 208-219 3-14 (35)
3 d1unda_ a.14.1.1 (A:) Advillin 14.5 12 0.00087 23.4 -0.7 12 208-219 4-15 (36)
4 d1ug0a_ a.217.1.1 (A:) Splicin 14.4 54 0.004 23.4 2.9 55 255-321 25-80 (88)
5 d1xrda1 f.3.1.1 (A:1-52) Light 13.6 43 0.0031 22.4 1.9 15 84-98 13-27 (52)
6 d1q1ha_ a.4.5.41 (A:) Transcri 11.1 21 0.0015 26.3 -0.4 7 235-241 74-80 (88)
7 d1iyca_ g.31.1.2 (A:) Antifung 10.6 37 0.0027 20.6 0.7 8 70-77 16-23 (36)
8 d1h5oa_ g.9.1.2 (A:) Crotamine 9.8 59 0.0043 20.3 1.5 17 17-33 14-30 (42)
9 d1hvwa_ g.3.6.2 (A:) Atracotox 8.6 70 0.0051 18.1 1.3 12 21-37 1-12 (26)
10 d1nuba2 g.3.11.3 (A:53-77) Dom 8.4 50 0.0036 18.9 0.6 9 70-78 6-14 (26)
No 1
>d1vf6c_ a.194.1.1 (C:) Maguk p55 subfamily member 5, Patj {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.99 E-value=8.1 Score=25.69 Aligned_cols=18 Identities=28% Similarity=0.279 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHhhhHHH
Q 020497 294 QLVLHLIHFALFQVLNCL 311 (325)
Q Consensus 294 ~llL~LIhfiLFQNAFel 311 (325)
.++|.|.|=.=|||||.+
T Consensus 29 ~l~lqLvqn~DFQnAfkI 46 (51)
T d1vf6c_ 29 SLLLQLVQNRDFQNAFKI 46 (51)
T ss_dssp HHHHHHHHCHHHHHHHHH
T ss_pred HHHHHHHHhhhHHHHHHH
Confidence 689999999999999986
No 2
>d1yu8x1 a.14.1.1 (X:42-76) Villin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=14.67 E-value=12 Score=23.27 Aligned_cols=12 Identities=42% Similarity=0.883 Sum_probs=10.5
Q ss_pred hhccccceeech
Q 020497 208 EDDFKIVVGVSP 219 (325)
Q Consensus 208 E~DFk~VVGIS~ 219 (325)
++||+.|.|+|-
T Consensus 3 d~dF~~vfgmsr 14 (35)
T d1yu8x1 3 DEDFKAVFGMTR 14 (35)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCCCH
Confidence 689999999985
No 3
>d1unda_ a.14.1.1 (A:) Advillin {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.52 E-value=12 Score=23.38 Aligned_cols=12 Identities=42% Similarity=0.736 Sum_probs=10.6
Q ss_pred hhccccceeech
Q 020497 208 EDDFKIVVGVSP 219 (325)
Q Consensus 208 E~DFk~VVGIS~ 219 (325)
|+||+.|.|+|-
T Consensus 4 d~dF~~vFgmsr 15 (36)
T d1unda_ 4 EQDFVSVFGITR 15 (36)
T ss_dssp HHHHHHHHSSCH
T ss_pred HHHHHHHHCcCH
Confidence 689999999985
No 4
>d1ug0a_ a.217.1.1 (A:) Splicing factor 4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.43 E-value=54 Score=23.43 Aligned_cols=55 Identities=11% Similarity=0.100 Sum_probs=35.0
Q ss_pred hhHHHHHHHHHHHHhhhcccccccccc-ccCCCccccCCchHHHHHHHHHHHhhhHHHHHHHHHHhhh
Q 020497 255 TELQSILTKMALEISERHAVVQGIPLV-QGSDQYFWFGRPQLVLHLIHFALFQVLNCLFFVLISDLRY 321 (325)
Q Consensus 255 tKLq~II~~la~ei~e~~~~v~g~~~v-~psD~lFWF~rP~llL~LIhfiLFQNAFelAfF~W~~~~~ 321 (325)
.++..||.++|.=|++.+...+-...- +.+|..|||=+ =++.=.-+|+-|-+++|
T Consensus 25 ~~~~~iI~~tA~~Vak~G~~fE~~l~~k~~~np~F~FL~------------d~~~~~~~YY~~kl~e~ 80 (88)
T d1ug0a_ 25 AETRRVIEKLARFVAEGGPELEKVAMEDYKDNPAFTFLH------------DKNSREFLYYRRKVAEI 80 (88)
T ss_dssp HHHHHHHHHHHHHHHHHCHHHHHHHHHHTTTCSSSHHHH------------CSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhccCCCCceeeC------------CCCCCCcHHHHHHHHHH
Confidence 367899999999998876554433222 35788899832 02333346666666655
No 5
>d1xrda1 f.3.1.1 (A:1-52) Light-harvesting complex subunits {Rhodospirillum rubrum [TaxId: 1085]}
Probab=13.55 E-value=43 Score=22.35 Aligned_cols=15 Identities=40% Similarity=0.625 Sum_probs=11.6
Q ss_pred hhHHHHHHHHHHHHH
Q 020497 84 ALHQLHILIFFLAVF 98 (325)
Q Consensus 84 ~LhQLHIFIFVLAv~ 98 (325)
.+--++.|.|+||+.
T Consensus 13 ~lva~~~fL~~LAl~ 27 (52)
T d1xrda1 13 ALVGLATFLFVLALL 27 (52)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 445688999999964
No 6
>d1q1ha_ a.4.5.41 (A:) Transcription factor E/IIe-alpha, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=11.05 E-value=21 Score=26.28 Aligned_cols=7 Identities=43% Similarity=1.863 Sum_probs=4.8
Q ss_pred Ccchhhh
Q 020497 235 GWHALFW 241 (325)
Q Consensus 235 gw~~yfW 241 (325)
||++|+|
T Consensus 74 gw~~Y~W 80 (88)
T d1q1ha_ 74 GWFIYYW 80 (88)
T ss_dssp CCCEEEE
T ss_pred CcEEEEE
Confidence 6666666
No 7
>d1iyca_ g.31.1.2 (A:) Antifungal peptide scarabaecin {Beetle (Oryctes rhinoceros) [TaxId: 72550]}
Probab=10.64 E-value=37 Score=20.60 Aligned_cols=8 Identities=38% Similarity=0.891 Sum_probs=6.5
Q ss_pred cccCCCcc
Q 020497 70 TECEKGSE 77 (325)
Q Consensus 70 ~~C~~Gkv 77 (325)
..|+||||
T Consensus 16 sncpkgkv 23 (36)
T d1iyca_ 16 SNCPKGKV 23 (36)
T ss_dssp SCCCSSCE
T ss_pred cCCCCcce
Confidence 46999987
No 8
>d1h5oa_ g.9.1.2 (A:) Crotamine {South american rattlesnake (Crotalus durissus terrificus) [TaxId: 8732]}
Probab=9.83 E-value=59 Score=20.35 Aligned_cols=17 Identities=29% Similarity=0.647 Sum_probs=10.3
Q ss_pred cccccccccCcCCcccC
Q 020497 17 ISKICIPSKVADTMLPC 33 (325)
Q Consensus 17 IskICIp~~~~~~~lPC 33 (325)
-.+||+|+|----=+.|
T Consensus 14 k~~iclppssd~gkmdc 30 (42)
T d1h5oa_ 14 KEKICLPPSSDFGKMDC 30 (42)
T ss_dssp TTSCCSSSSCBCCSSSS
T ss_pred cceeECCCccccccccC
Confidence 35799998754332344
No 9
>d1hvwa_ g.3.6.2 (A:) Atracotoxin-hvI (versutoxin) {Australian funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=8.64 E-value=70 Score=18.06 Aligned_cols=12 Identities=50% Similarity=1.121 Sum_probs=8.3
Q ss_pred cccccCcCCcccCCCCC
Q 020497 21 CIPSKVADTMLPCKADG 37 (325)
Q Consensus 21 CIp~~~~~~~lPC~~~~ 37 (325)
|||++- ||...+
T Consensus 1 cipsgq-----pcpyne 12 (26)
T d1hvwa_ 1 CIPSGQ-----PCPYNE 12 (26)
T ss_dssp CBCTTS-----BCSSTT
T ss_pred CCCCCC-----cCCCCc
Confidence 888874 886543
No 10
>d1nuba2 g.3.11.3 (A:53-77) Domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.36 E-value=50 Score=18.87 Aligned_cols=9 Identities=22% Similarity=0.560 Sum_probs=6.6
Q ss_pred cccCCCccc
Q 020497 70 TECEKGSEP 78 (325)
Q Consensus 70 ~~C~~Gkvp 78 (325)
.+|++|||-
T Consensus 6 hhck~gkvc 14 (26)
T d1nuba2 6 HHCKHGKVC 14 (26)
T ss_dssp CCCCTTEEE
T ss_pred cccccCcEe
Confidence 468888874
Done!