Query 020504
Match_columns 325
No_of_seqs 259 out of 1407
Neff 5.7
Searched_HMMs 46136
Date Fri Mar 29 02:55:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020504.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020504hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03161 Probable xyloglucan e 100.0 4.2E-79 9.1E-84 578.4 31.6 273 9-287 3-290 (291)
2 cd02176 GH16_XET Xyloglucan en 100.0 3.1E-77 6.6E-82 561.0 30.3 248 29-283 3-263 (263)
3 cd02183 GH16_fungal_CRH1_trans 100.0 4.7E-41 1E-45 305.6 23.4 168 40-224 14-202 (203)
4 cd02175 GH16_lichenase lichena 100.0 7.1E-35 1.5E-39 265.2 23.2 169 38-221 27-211 (212)
5 PF00722 Glyco_hydro_16: Glyco 100.0 5.7E-32 1.2E-36 238.6 16.8 168 34-219 3-185 (185)
6 cd00413 Glyco_hydrolase_16 gly 100.0 1.1E-30 2.3E-35 234.5 22.1 173 38-221 25-210 (210)
7 cd08023 GH16_laminarinase_like 100.0 2.5E-28 5.4E-33 224.3 20.3 172 39-221 34-235 (235)
8 cd02178 GH16_beta_agarase Beta 100.0 1.2E-27 2.7E-32 224.0 20.9 171 42-221 57-257 (258)
9 cd02177 GH16_kappa_carrageenas 99.9 1.1E-26 2.5E-31 219.5 20.4 172 42-221 43-268 (269)
10 cd02180 GH16_fungal_KRE6_gluca 99.9 9E-25 1.9E-29 209.1 18.1 178 38-221 36-294 (295)
11 cd02182 GH16_Strep_laminarinas 99.9 1.8E-24 4E-29 202.7 18.5 176 40-221 43-258 (259)
12 COG2273 SKN1 Beta-glucanase/Be 99.9 7.8E-23 1.7E-27 200.0 18.1 172 39-220 75-262 (355)
13 cd08024 GH16_CCF Coelomic cyto 99.9 2.7E-22 5.9E-27 194.7 16.9 131 64-196 102-279 (330)
14 cd02179 GH16_beta_GRP beta-1,3 99.9 8.8E-22 1.9E-26 190.6 14.5 128 64-193 99-268 (321)
15 PF06955 XET_C: Xyloglucan end 99.8 4.1E-19 8.9E-24 128.3 4.3 43 240-283 8-51 (51)
16 PF03935 SKN1: Beta-glucan syn 99.4 1.5E-12 3.3E-17 131.7 13.1 172 42-221 160-452 (504)
17 cd02181 GH16_fungal_Lam16A_glu 99.4 5.6E-12 1.2E-16 120.5 13.0 143 43-196 42-251 (293)
18 PF10287 DUF2401: Putative TOS 85.3 5.7 0.00012 37.5 8.8 85 77-164 103-208 (235)
19 KOG1834 Calsyntenin [Extracell 52.6 1.1E+02 0.0024 33.4 9.9 48 149-196 440-492 (952)
20 PHA02724 hydrophobic IMV membr 38.6 25 0.00054 25.7 2.0 21 1-21 1-21 (53)
21 PHA03047 IMV membrane receptor 38.4 25 0.00055 25.7 2.0 21 1-21 1-21 (53)
22 PF13385 Laminin_G_3: Concanav 37.8 2.1E+02 0.0045 22.7 12.4 60 149-222 83-148 (157)
23 PF06269 DUF1029: Protein of u 33.1 35 0.00075 25.0 2.0 21 1-21 1-21 (53)
24 PHA02679 ORF091 IMV membrane p 32.6 36 0.00078 24.9 2.0 21 1-21 1-21 (53)
25 smart00560 LamGL LamG-like jel 28.9 3.3E+02 0.0071 22.4 13.1 67 148-224 58-129 (133)
26 PF11191 DUF2782: Protein of u 23.2 3.5E+02 0.0076 21.9 6.6 40 54-101 39-79 (105)
27 smart00210 TSPN Thrombospondin 21.8 5.5E+02 0.012 22.5 12.8 124 77-223 56-182 (184)
No 1
>PLN03161 Probable xyloglucan endotransglucosylase/hydrolase protein; Provisional
Probab=100.00 E-value=4.2e-79 Score=578.44 Aligned_cols=273 Identities=31% Similarity=0.613 Sum_probs=239.7
Q ss_pred HHHHHHHHHHhhccc-cCCCCCCCcCCCCcccccCCceEEeCCCcEEEEEEeCCCCceeEeeceeEEeEEEEEEEecCCC
Q 020504 9 FLLVFSLLAVVASGL-YRNLPIVPFDEGYSHLFGHDNLVVHTDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADY 87 (325)
Q Consensus 9 ~~~~~~~~~~~~~~~-~~~~~~~~f~~~f~~~w~~~~v~~~~~G~~l~L~ld~~sGa~~~Sk~~y~YG~fear~Klp~g~ 87 (325)
.||.||++++++-|+ -......+|+++|...|+.+|+.+.++|..|+|+||+.+|++|+||..|+||+||||||||+|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~~~~g~~l~L~ld~~sgs~~~Sk~~f~yGr~E~riKLp~G~ 82 (291)
T PLN03161 3 SLKTLLVALFAALAAFDRSFVEADFSKSMYFTWGADHSSMLGNGDNLQLVLDQSSGSGIKSKRAFLFGSIEMLIKLVPGN 82 (291)
T ss_pred hHHHHHHHHHHHHHhcCCCcccccccccceeeEcCCcEEEeCCCCEEEEEEeCCccCcEEecceEEEEEEEEEEEeCCCC
Confidence 456666666664333 3334678899999999999999998888899999999999999999999999999999999988
Q ss_pred CCceEEEEEEeeCCCCCCCCCeeeEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecCCCCCCCcEEEEEEeCccceEE
Q 020504 88 TAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIME 167 (325)
Q Consensus 88 s~Gvv~Af~l~s~~~~~~~~dEIDiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~ 167 (325)
++|+||||||++.+ +.||||||||||+++++|+++|||+|.+|. +.++++++++|||+++||+|+|+|+|++|+|
T Consensus 83 saG~v~AFwl~s~~---~~~dEIDiEfLG~~~g~~~~vqtN~y~~g~--g~re~~~~l~fDpt~dFHtYsI~Wtp~~I~w 157 (291)
T PLN03161 83 SAGTVTAYYLSSTG---SRHDEIDFEFLGNVSGQPYTIHTNIYTQGN--GSREQQFRPWFDPTADFHNYTIHWNPSEVVW 157 (291)
T ss_pred CCCeEEEEEecCCC---CCCCeEEEEecCCCCCCceEEEeceEeCCc--CCcceeccccCCCccCcEEEEEEEchhhEEE
Confidence 89999999999863 579999999999999999999999999987 6789999999999999999999999999999
Q ss_pred Eeecc---------cCCCCCC-CCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEeeeecCCCCCCCCccCC
Q 020504 168 FKRTA---------SMGGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDI 237 (325)
Q Consensus 168 ~~~~~---------~~g~~~P-~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~~c~~~~~~~~~~~C~~ 237 (325)
|+|++ ..+.+|| .+||+|++|||+|++|||.||++||||+++||+|.|++|+|+||.+++... ...|..
T Consensus 158 yVDG~~iRt~~~~~~~g~~yP~~~pM~i~~siW~g~~wAt~gG~~kidw~~aPf~a~~~~f~~~~C~~~~~~~-~~~c~~ 236 (291)
T PLN03161 158 YVDGTPIRVFRNYENEGIAYPNKQGMRVYSSLWNADNWATQGGRVKIDWTLAPFVARGRRFRARACKWNGPVS-IKQCAD 236 (291)
T ss_pred EECCEEEEEEEcccccCCcCCCccceEEEEeeecCCCcccCCCceeccCCcCCeeEEeeeEEEEeeccCCCCC-ccccCC
Confidence 99875 2356799 579999999999999999999999999999999999999999999865311 246865
Q ss_pred C---CCCCCCCCCCCCHHHHHHHHHHhhcCeEEcccccCCCCCC-CCCcccCCh
Q 020504 238 T---ESSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKV-PPFECVINP 287 (325)
Q Consensus 238 ~---~~~~~~~~~~L~~~q~~~~~~vr~~ymiYdYC~D~~R~p~-~p~EC~~~~ 287 (325)
+ .|+....++.|+++|+++|+|||+||||||||+|++|||+ +||||.++.
T Consensus 237 ~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~m~Y~YC~D~~R~~~~~p~EC~~~~ 290 (291)
T PLN03161 237 PTPSNWWTSPSYSQLTNAQLTQMKKVRDNFMIYDYCKDTKRFNGVMPPECFKPQ 290 (291)
T ss_pred CCccccccCccccCCCHHHHHHHHHHHhCcEEEeccCCCCcCCCCcCcccCCCc
Confidence 3 2443456789999999999999999999999999999998 899997653
No 2
>cd02176 GH16_XET Xyloglucan endotransglycosylase, member of glycosyl hydrolase family 16. Xyloglucan endotransglycosylases (XETs) cleave and religate xyloglucan polymers in plant cell walls via a transglycosylation mechanism. Xyloglucan is a soluble hemicellulose with a backbone of beta-1,4-linked glucose units, partially substituted with alpha-1,6-linked xylopyranose branches. It binds noncovalently to cellulose, cross-linking the adjacent cellulose microfibrils, giving it a key structural role as a matrix polymer. Therefore, XET plays an important role in all plant processes that require cell wall remodeling.
Probab=100.00 E-value=3.1e-77 Score=561.01 Aligned_cols=248 Identities=48% Similarity=0.914 Sum_probs=227.3
Q ss_pred CCCcCCCCcccccCCceEEeCCCcEEEEEEeCCCCceeEeeceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCC
Q 020504 29 IVPFDEGYSHLFGHDNLVVHTDGKSVHLSLDERTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHD 108 (325)
Q Consensus 29 ~~~f~~~f~~~w~~~~v~~~~~G~~l~L~ld~~sGa~~~Sk~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~d 108 (325)
..+|.++|..+|+++||++.++|..|+|+||+.+|++|+|+..|+||+||||||||+|+++|+||||||++++ |+.+|
T Consensus 3 ~~~f~~~~~~~w~~~~~~~~~~g~~~~L~ld~~s~~~i~Sk~~f~YG~~E~riKlp~g~s~G~~pAFwl~~~~--wp~~~ 80 (263)
T cd02176 3 AASFDENFFVTWGPDHIRVSNDGTSVQLTLDQSSGSGFKSKNKYLFGFFSMRIKLPPGDSAGTVTAFYLSSQG--PDNHD 80 (263)
T ss_pred cCCccccceeeEcCCcEEEeCCCCEEEEEEcCCCCccEEEccEEEEEEEEEEEEeCCCCCCCeEEEEEECCCC--CCCCC
Confidence 5679999999999999999988899999999999999999999999999999999998889999999999986 78999
Q ss_pred eeeEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecCCCCCCCcEEEEEEeCccceEEEeecc---------cCCCCCC
Q 020504 109 EIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIMEFKRTA---------SMGGDFP 179 (325)
Q Consensus 109 EIDiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~---------~~g~~~P 179 (325)
||||||||+++|+|+++|||+|.+|. ++++++++++|||+++||+|+|+|+|++|+||+|+. ..+.+||
T Consensus 81 EID~E~lGn~~g~~~~~qtnv~~~g~--g~r~~~~~l~fdpt~dFHtY~i~Wtp~~I~fyVDG~~vr~~~~~~~~g~~~P 158 (263)
T cd02176 81 EIDFEFLGNVTGQPYTLQTNVFANGV--GGREQRIYLWFDPTADFHTYSILWNPHQIVFYVDDVPIRVFKNNEALGVPYP 158 (263)
T ss_pred eEEEEEecccCCCceEEEEEEeCCCC--CCCceeeecCCCCCCCeEEEEEEEccceEEEEECCEEEEEEecccccCCCCC
Confidence 99999999999999999999999987 568899999999999999999999999999999874 2356899
Q ss_pred C-CCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEeeeecCCCCCCCCccCC---CCCCCCCCCCCCCHHHHH
Q 020504 180 A-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGCSFDPIEQTSSKCDI---TESSKVSIPTGVSPSQRI 255 (325)
Q Consensus 180 ~-~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~~c~~~~~~~~~~~C~~---~~~~~~~~~~~L~~~q~~ 255 (325)
. +||+|++|||+||+|||+||++++||+++||+|.|++|+|.||.+++.. ..|.. ..|+....+++|+++|++
T Consensus 159 ~~~Pm~l~~niW~g~~WAt~gG~~~~d~~~aPf~a~~~~~~~~~c~~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~~ 235 (263)
T cd02176 159 SSQPMGVYASIWDGSDWATQGGRVKIDWSYAPFVASYRDFKLDGCVVDPGD---SFSSCSCTEDWWNGSTYQQLSANQQR 235 (263)
T ss_pred ccceEEEEEeeEcCCCcccCCCcccccCCCCCeeEEEeeEEEeeeecCCCC---ccccCCCccccccccccccCCHHHHH
Confidence 5 9999999999999999999999999999999999999999999987532 24543 224444567899999999
Q ss_pred HHHHHhhcCeEEcccccCCCCCCCCCcc
Q 020504 256 KMENFRRKHMTYSYCYDQIRYKVPPFEC 283 (325)
Q Consensus 256 ~~~~vr~~ymiYdYC~D~~R~p~~p~EC 283 (325)
+|+|||+||||||||+|++|||.+||||
T Consensus 236 ~~~~~~~~~~~y~yC~d~~r~~~~p~ec 263 (263)
T cd02176 236 AMEWVRRNYMVYDYCDDRKRYPVPPPEC 263 (263)
T ss_pred HHHHHHHCCEEEecCCCCCcCCCCcCCC
Confidence 9999999999999999999999999999
No 3
>cd02183 GH16_fungal_CRH1_transglycosylase glycosylphosphatidylinositol-glucanosyltransferase. Group of fungal GH16 members related to Saccharomyces cerevisiae Crh1p. Chr1p and Crh2p are transglycosylases that are required for the linkage of chitin to beta(1-3)glucose branches of beta(1-6)glucan, an important step in the assembly of new cell wall. Both have been shown to be glycosylphosphatidylinositol (GPI)-anchored. A third homologous protein, Crr1p, functions in the formation of the spore wall. They belongs to the family 16 of glycosyl hydrolases that includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.
Probab=100.00 E-value=4.7e-41 Score=305.64 Aligned_cols=168 Identities=27% Similarity=0.509 Sum_probs=146.2
Q ss_pred ccCCceEEeCCCcEEEEEEeCC-CCceeEeeceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCCeeeEEEcCCc
Q 020504 40 FGHDNLVVHTDGKSVHLSLDER-TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNI 118 (325)
Q Consensus 40 w~~~~v~~~~~G~~l~L~ld~~-sGa~~~Sk~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~dEIDiEfLG~~ 118 (325)
...++|.+..+ +|+|+|++. ++++|.|++.|+||+||||||+|.+ +|+||||||+++ .++|||||++|+
T Consensus 14 ~~~~~~~~~~~--~~~l~~~~~~~~~~i~s~~~f~YG~~EaR~Klp~g--~G~wpAfWl~~~-----~~gEIDIE~~G~- 83 (203)
T cd02183 14 VTSGTVDYDDD--GASLTIPKRGDGPTISSTFYIFYGKVEVTMKAAPG--QGIVSSFVLQSD-----DLDEIDWEWVGG- 83 (203)
T ss_pred ecCCcEeECCC--eEEEEEcCCCCCCeEEeccEEEeEEEEEEEEecCC--CeEEEEEEEECC-----CCCEEEEEecCC-
Confidence 35678888643 699999998 7999999999999999999999998 999999999987 479999999996
Q ss_pred CCCCeEEEeeEEcCCcc-cCCcceEEecCCCCCCCcEEEEEEeCccceEEEeeccc----------CCCCCCCCCceeEE
Q 020504 119 RGKDWRIQTNIYGNGST-SIGREERYNLWFDPSDDFHQYSILWTDSQIMEFKRTAS----------MGGDFPAKPMSLYA 187 (325)
Q Consensus 119 ~g~p~~vqTNv~~~G~~-~~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~----------~g~~~P~~Pm~l~l 187 (325)
++..+|+|+|.+|.. ...+++.+.++++++++||+|+|+|+|+.|+||+|+.. .+..||++||+|++
T Consensus 84 --~~~~~~tn~~~~g~~~~~~~~~~~~~~~~~~~dFHtY~veWtpd~I~~yVDG~~v~~~~~~~~~~~~~~p~~P~~l~l 161 (203)
T cd02183 84 --DLTQVQTNYFGKGNTTTYDRGGYHPVPNPQTEEFHTYTIDWTKDRITWYIDGKVVRTLTKADTTGGYGYPQTPMRLQI 161 (203)
T ss_pred --CCCEEEeEEECCCCCCCCCCceEeeCCCCCCcCcEEEEEEEecCEEEEEECCEEEEEEehhhcccCCCCCCCCcEEEE
Confidence 456899999987753 23455778889999999999999999999999999852 14579999999999
Q ss_pred eeccCCC---------CCCCCCccccCCCCCcEEEEEcEEEEeeee
Q 020504 188 TIWDGSD---------WATNGGKYRVNYKYAPYVTEFSDFVLHGCS 224 (325)
Q Consensus 188 niW~gg~---------WAt~GG~~~id~s~aPf~a~v~~v~v~~c~ 224 (325)
|+|+||+ || || ++||+.+||.|.|++|+|+ |.
T Consensus 162 n~W~gg~~~~~~g~~~Wa--Gg--~~d~~~~P~~~~vd~v~v~-~~ 202 (203)
T cd02183 162 GIWAGGDPSNAPGTIEWA--GG--ETDYDKGPFTMYVKSVTVT-DY 202 (203)
T ss_pred EEecCCCccccCCcccCC--CC--ccCCCCCCEEEEEEEEEEE-eC
Confidence 9999985 99 88 6999999999999999998 64
No 4
>cd02175 GH16_lichenase lichenase, member of glycosyl hydrolase family 16. Lichenase, also known as 1,3-1,4-beta-glucanase, is a member of glycosyl hydrolase family 16, that specifically cleaves 1,4-beta-D-glucosidic bonds in mixed-linked beta glucans that also contain 1,3-beta-D-glucosidic linkages. Natural substrates of beta-glucanase are beta-glucans from grain endosperm cell walls or lichenan from the Islandic moss, Cetraria islandica. This protein is found not only in bacteria but also in anaerobic fungi. This domain includes two seven-stranded antiparallel beta-sheets that are adjacent to one another forming a compact, jellyroll beta-sandwich structure.
Probab=100.00 E-value=7.1e-35 Score=265.23 Aligned_cols=169 Identities=28% Similarity=0.515 Sum_probs=142.0
Q ss_pred ccccCCceEEeCCCcEEEEEEeCC-------CCceeEeeceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCCee
Q 020504 38 HLFGHDNLVVHTDGKSVHLSLDER-------TGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEI 110 (325)
Q Consensus 38 ~~w~~~~v~~~~~G~~l~L~ld~~-------sGa~~~Sk~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~dEI 110 (325)
-.|.++||++.+ | .|+|++.+. ++++|.|+.+|+||+||+|||+|.+ +|+|+||||++++.....++||
T Consensus 27 ~~~~~~nv~v~~-g-~L~l~~~~~~~~~~~~tsg~i~S~~~f~yG~~ear~k~~~~--~G~~~Afwl~~~~~~~~~~~EI 102 (212)
T cd02175 27 CTWSADNVEFSD-G-GLALTLTNDTYGEKPYACGEYRTRGFYGYGRYEVRMKPAKG--SGVVSSFFTYTGPYDGDPHDEI 102 (212)
T ss_pred eeEccccEEEEC-C-eEEEEEeCCcCCCCccccceEEECceEEeeEEEEEEEcCCC--CeEEEEEEEEecCCCCCCCCEE
Confidence 357789999974 4 688888764 3789999999999999999999987 9999999999865434567999
Q ss_pred eEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecCCCCCCCcEEEEEEeCccceEEEeecccC----C--CCCCCCCce
Q 020504 111 DFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIMEFKRTASM----G--GDFPAKPMS 184 (325)
Q Consensus 111 DiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~~----g--~~~P~~Pm~ 184 (325)
|||++|++. ..+|+|+|.+|. +..+..+.+++|++++||+|+|+|+|++|+||+|++.. . ..+|++||+
T Consensus 103 DiE~~g~~~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~H~Y~v~W~~~~i~~yvDg~~v~~~~~~~~~~p~~p~~ 177 (212)
T cd02175 103 DIEFLGKDT---TKVQFNYYTNGV--GGHEKLIDLGFDASEGFHTYAFEWEPDSIRWYVDGELVHEATATDPNIPDTPGK 177 (212)
T ss_pred EEEEccCCC---CEeEEEEECCCC--CCCceEEeCCCCcccccEEEEEEEeCCEEEEEECCEEEEEEcCccCCCCCCCcE
Confidence 999999754 478999998876 44556678889999999999999999999999998631 1 268999999
Q ss_pred eEEeeccCC---CCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 185 LYATIWDGS---DWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 185 l~lniW~gg---~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
|++|+|.++ +|+ | ++|. .+|++|+||+|||+
T Consensus 178 i~~n~w~~~~~~~W~---G--~~~~-~~p~~~~vd~vr~~ 211 (212)
T cd02175 178 IMMNLWPGDGVDDWL---G--PFDG-GTPLTAEYDWVSYT 211 (212)
T ss_pred EEEEEEcCCCCCCcC---C--cCCC-CCCeEEEEEEEEEe
Confidence 999999985 598 5 4677 88999999999986
No 5
>PF00722 Glyco_hydro_16: Glycosyl hydrolases family 16; InterPro: IPR000757 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 16 GH16 from CAZY comprises enzymes with a number of known activities; lichenase (3.2.1.73 from EC); xyloglucan xyloglucosyltransferase (2.4.1.207 from EC); agarase (3.2.1.81 from EC); kappa-carrageenase (3.2.1.83 from EC); endo-beta-1,3-glucanase (3.2.1.39 from EC); endo-beta-1,3-1,4-glucanase (3.2.1.6 from EC); endo-beta-galactosidase (3.2.1.103 from EC).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3DGT_A 2CL2_A 2WLQ_A 2WNE_A 2W39_A 2W52_A 3ILN_A 4DFS_A 1UMZ_A 1UN1_B ....
Probab=100.00 E-value=5.7e-32 Score=238.60 Aligned_cols=168 Identities=35% Similarity=0.534 Sum_probs=140.7
Q ss_pred CCCcccccCCceEEeCCCcEEEEEEeC-----CCCceeEeeceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCC
Q 020504 34 EGYSHLFGHDNLVVHTDGKSVHLSLDE-----RTGSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHD 108 (325)
Q Consensus 34 ~~f~~~w~~~~v~~~~~G~~l~L~ld~-----~sGa~~~Sk~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~d 108 (325)
+.+..+|.++||.+.++ ..|+|++++ .++++|+|+..++||+||+|||++.+ .|+|+||||++.+. ++.++
T Consensus 3 ~~~~~~~~~~nv~~~~g-~~L~L~~~~~~~~~~~sg~i~s~~~~~yG~~ear~k~~~~--~G~~~afwl~~~~~-~~~~~ 78 (185)
T PF00722_consen 3 DQYNCTWSPDNVTVEDG-GNLVLRADKEPGKPYTSGEIQSKFSFKYGRFEARIKAPPG--PGVWPAFWLTGADG-WPDGG 78 (185)
T ss_dssp CTEEEEETCCGEEEETT-SEEEEEEEEEETEEEEEEEEEESSEBSSEEEEEEEECSCS--TTEEEEEEEETTGS-TTTTE
T ss_pred CceEEeeCCCcEEEcCC-CEEEEEEEecccCceEeCEEEEcceeECcEEEEEEEecCC--CceEeccccccccc-ccchh
Confidence 45778899999999755 589999988 56899999999999999999999886 99999999976444 78999
Q ss_pred eeeEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecCCCCCCCcEEEEEEeCccceEEEeeccc-----C----CCCCC
Q 020504 109 EIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWFDPSDDFHQYSILWTDSQIMEFKRTAS-----M----GGDFP 179 (325)
Q Consensus 109 EIDiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~-----~----g~~~P 179 (325)
|||||++|+++. .+++|+|..|......+.++.+.+++.++||+|+|+|+|++|+||+|++. . +..||
T Consensus 79 EIDiE~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~y~~~W~~~~i~fyiDg~~~~~~~~~~~~~~~~P 155 (185)
T PF00722_consen 79 EIDIEFLGNDPT---QVQTNVHWNGDGDSNWEKRVPLGFDPSTDFHTYGFEWTPDRIRFYIDGKLVRTVTNSDVPGSPYP 155 (185)
T ss_dssp EEEEEEETTSTT---EEEEEEEBTTBSCEEEEEEEETSSTTTTSEEEEEEEEETTEEEEEETTEEEEEEESSGSTTTCSS
T ss_pred hhhhhhcccccc---ceeeeeeecccCCcccceeeccccCcCCCcEEEEEEEecCeEEEEECCEEEEEEeccccccccCc
Confidence 999999998654 69999998887321135677888999999999999999999999999862 1 12489
Q ss_pred C-CCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEE
Q 020504 180 A-KPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFV 219 (325)
Q Consensus 180 ~-~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~ 219 (325)
. .||+|.+++|.+++|++..| .|+|||||
T Consensus 156 ~~~~~~~~~~~w~~~~~~~~~~-----------~m~vDwvr 185 (185)
T PF00722_consen 156 FSTPMNLALGLWPGGDWAGPAG-----------EMEVDWVR 185 (185)
T ss_dssp EEEEEEEEEEECEBTTTHSSEC-----------EEEEEEEE
T ss_pred ccceeEEEEccccCCCCCCCCC-----------EEEEEeEC
Confidence 6 99999999999999984444 78888886
No 6
>cd00413 Glyco_hydrolase_16 glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues.
Probab=99.98 E-value=1.1e-30 Score=234.54 Aligned_cols=173 Identities=29% Similarity=0.464 Sum_probs=142.6
Q ss_pred ccccCCceEEeCCCcEEEEEEeCC------CCceeEe-eceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCCee
Q 020504 38 HLFGHDNLVVHTDGKSVHLSLDER------TGSGFVS-HDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEI 110 (325)
Q Consensus 38 ~~w~~~~v~~~~~G~~l~L~ld~~------sGa~~~S-k~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~dEI 110 (325)
..|.++||.+.++| .|.|++.+. .+++|.| ++.|+||+||+|||++.+ .|+|+||||++++..++..+||
T Consensus 25 ~~~~~~nv~~~~~G-~L~l~~~~~~~~~~~~sg~i~s~~~~~~yG~~ear~k~~~~--~G~~~afw~~~~~~~~~~~~EI 101 (210)
T cd00413 25 MTNSPNNVYVENDG-GLTLRTDRDQTDGPYSSAEIDSQKNNYTYGYYEARAKLAGG--PGAVSAFWTYSDDDDPPDGGEI 101 (210)
T ss_pred EEECccCEEEeCCC-eEEEEEEecCCCCceEeEEEEeCcceEeeEEEEEEEEcCCC--CceEEEEEEeCCCCCCCCCCeE
Confidence 46778999997645 688888754 4688999 999999999999999987 9999999999987545789999
Q ss_pred eEEEcCCcCCCCeEEEeeEEcCCccc---CCcceEEecCCCCCCCcEEEEEEeCccceEEEeecccC---CCCCCCCCce
Q 020504 111 DFEFLGNIRGKDWRIQTNIYGNGSTS---IGREERYNLWFDPSDDFHQYSILWTDSQIMEFKRTASM---GGDFPAKPMS 184 (325)
Q Consensus 111 DiEfLG~~~g~p~~vqTNv~~~G~~~---~~~e~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~~---g~~~P~~Pm~ 184 (325)
|||++|++ +..+++++|..+... ......+.+++++.++||+|+|+|+|+.|+||+|++.. ...+|.+||+
T Consensus 102 DiE~~~~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~H~Y~~~W~~~~i~~yvDG~~~~~~~~~~p~~p~~ 178 (210)
T cd00413 102 DIEFLGRD---PTTVQTNVHWPGYGAGATTGEEKSVHLPFDPADDFHTYRVDWTPGEITFYVDGVLVATITNQVPDDPMN 178 (210)
T ss_pred EEEecccC---CCeEEEEEecCCCCcccccccceeecCCCCCccCeEEEEEEEeCCEEEEEECCEEEEEECCCCCCCCcE
Confidence 99999975 447889998765421 23345566778889999999999999999999998732 2347899999
Q ss_pred eEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 185 LYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 185 l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
|++|+|.+++|+ +. .+....|..|.|++|+|.
T Consensus 179 i~ln~~~~~~~~--~~---~~~~~~~~~~~Vd~vrvy 210 (210)
T cd00413 179 IILNLWSDGGWW--WG---GPPPGAPAYMEIDWVRVY 210 (210)
T ss_pred EEEEEEECCCCc--cc---CCCCCCCcEEEEEEEEEC
Confidence 999999999987 22 355688999999999973
No 7
>cd08023 GH16_laminarinase_like Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
Probab=99.96 E-value=2.5e-28 Score=224.29 Aligned_cols=172 Identities=24% Similarity=0.385 Sum_probs=135.4
Q ss_pred cccCCceEEeCCCcEEEEEEeCCC----------CceeEe--eceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCC---
Q 020504 39 LFGHDNLVVHTDGKSVHLSLDERT----------GSGFVS--HDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMF--- 103 (325)
Q Consensus 39 ~w~~~~v~~~~~G~~l~L~ld~~s----------Ga~~~S--k~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~--- 103 (325)
.+.++||.+. +| .|.|+..+.+ ++.|.| ++.|+||+||||||+|.+ +|++|||||++++..
T Consensus 34 ~~~~~nv~v~-~G-~L~i~~~~~~~~~~~~~~~~sg~i~S~~~~~~~yG~~E~r~k~~~~--~G~~pafWl~~~~~~~~~ 109 (235)
T cd08023 34 TYRPENAYVE-DG-NLVITARKEPDKGGDGYPYTSGRITTKGKFSFTYGRVEARAKLPKG--QGTWPAFWMLGENIKYVG 109 (235)
T ss_pred eCCCCCeEEE-CC-EEEEEEEECCCCCCCcccEEEEEEEECCCcceeCCEEEEEEEccCC--CCceeEEEEcCCCCCCCC
Confidence 4567888886 44 6888765432 467888 888999999999999997 999999999998642
Q ss_pred CCCCCeeeE-EEcCCcCCCCeEEEeeEEcCCcc--cCCcceEEecCC-CCCCCcEEEEEEeCccceEEEeecccC-----
Q 020504 104 EKNHDEIDF-EFLGNIRGKDWRIQTNIYGNGST--SIGREERYNLWF-DPSDDFHQYSILWTDSQIMEFKRTASM----- 174 (325)
Q Consensus 104 ~~~~dEIDi-EfLG~~~g~p~~vqTNv~~~G~~--~~~~e~~~~l~f-Dpt~dFHtYsIdWtpd~IR~~~~~~~~----- 174 (325)
|+.++|||| |++|+. +..+++++|..+.. .......+.+.. +++++||+|+|+|+|++|+||+|++..
T Consensus 110 w~~~~EIDI~E~~g~~---~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~~~W~p~~i~~yvDG~~v~~~~~ 186 (235)
T cd08023 110 WPASGEIDIMEYVGNE---PNTVYGTLHGGATNDGNNGSGGSYTLPTDDLSDDFHTYAVEWTPDKITFYVDGKLYFTYTN 186 (235)
T ss_pred CCCCCcceeEecCCCC---CCeEEEEEECCCCCCCCCcccccEECCCCCcCCCcEEEEEEEECCEEEEEECCEEEEEEcc
Confidence 678899998 999985 44788999977642 123344566665 799999999999999999999998631
Q ss_pred CC-----CCC-CCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 175 GG-----DFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 175 g~-----~~P-~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
.. .+| ++||+|+|++|.+++|+ |. ...-...|..|.||+|||.
T Consensus 187 ~~~~~~~~~~~~~p~~liln~~~gg~w~---g~-~~~~~~~p~~~~VDyVrvy 235 (235)
T cd08023 187 PNTDNGGQWPFDQPFYLILNLAVGGNWP---GP-PDDDTPFPATMEVDYVRVY 235 (235)
T ss_pred cccCCcccCCCCCCcEEEEEEEEcCCCC---CC-CCCCCCCCCEEEEEEEEEC
Confidence 11 234 89999999999999998 42 1345578999999999984
No 8
>cd02178 GH16_beta_agarase Beta-agarase, member of glycosyl hydrolase family 16. Beta-agarase is a glycosyl hydrolase family 16 (GH16) member that hydrolyzes the internal beta-1,4-linkage of agarose, a hydrophilic polysaccharide found in the cell wall of Rhodophyceaea, marine red algae. Agarose is a linear chain of galactose units linked by alternating L-alpha-1,3- and D-beta-1,4-linkages that are additionally modified by a 3,6-anhydro-bridge. Agarose forms thermo-reversible gels that are widely used in the food industry or as a laboratory medium. While beta-agarases are also found in two other families derived from the sequence-based classification of glycosyl hydrolases (GH50, and GH86) the GH16 members are most abundant. This domain adopts a curved beta-sandwich conformation, with a tunnel-shaped active site cavity, referred to as a jellyroll fold.
Probab=99.96 E-value=1.2e-27 Score=223.95 Aligned_cols=171 Identities=19% Similarity=0.213 Sum_probs=126.4
Q ss_pred CCceEEeCCCcEEEEEEeCCC-----------CceeEeeceeEEeEEEEEEEecCCCCCceEEEEEEeeCCCCCCCCCee
Q 020504 42 HDNLVVHTDGKSVHLSLDERT-----------GSGFVSHDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEI 110 (325)
Q Consensus 42 ~~~v~~~~~G~~l~L~ld~~s-----------Ga~~~Sk~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~dEI 110 (325)
++||.+. +| .|.|+..+.. ++.|.|++.|+||+||||||+|.+ . ++|||||++.+ ++.++||
T Consensus 57 ~~nv~v~-~G-~L~i~a~~~~~~~~~~~~~~tsg~i~t~~~~~YG~~EaR~K~p~~--~-~~pAfW~~~~~--~~~~gEI 129 (258)
T cd02178 57 ADNVSVE-DG-NLVLSATRHPGTELGNGYKVTTGSITSKEKVKYGYFEARAKASNL--P-MSSAFWLLSDT--KDSTTEI 129 (258)
T ss_pred cCCeEEE-CC-EEEEEEEcCCCCcCCCCccEEEEEEEeCCceEEEEEEEEEEcCCC--C-ccceEEEccCC--CCCCCcE
Confidence 4667765 45 7888876543 467899999999999999999985 4 47999999986 5689999
Q ss_pred eE-EEcCCcC--CCCeEEEeeEEcCCc--c-cCCc---ceEEecCCCCCCCcEEEEEEeC-ccceEEEeecccC------
Q 020504 111 DF-EFLGNIR--GKDWRIQTNIYGNGS--T-SIGR---EERYNLWFDPSDDFHQYSILWT-DSQIMEFKRTASM------ 174 (325)
Q Consensus 111 Di-EfLG~~~--g~p~~vqTNv~~~G~--~-~~~~---e~~~~l~fDpt~dFHtYsIdWt-pd~IR~~~~~~~~------ 174 (325)
|| |++|++. ..+..+|++++.-+. . ...+ ...+.+.++++++||+|+|+|+ |++|+||+|++..
T Consensus 130 DI~E~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~veW~~p~~i~fyvDG~~~~~~~~~ 209 (258)
T cd02178 130 DILEHYGGDREEWFATRMNSNTHVFIRDPEQDYQPKDDGSWYYNPTELADDFHVYGVYWKDPDTIRFYIDGVLVRTVENS 209 (258)
T ss_pred EhhhccCCCCCccccceeeeeEEEccCCCCCCccccccceeecCCCccccCeEEEEEEEcCCCeEEEEECCEEEEEEcCc
Confidence 98 9999763 224578888763221 1 1111 2335566788999999999999 9999999998621
Q ss_pred --CCCCC-CCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 175 --GGDFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 175 --g~~~P-~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
....| ++||+|+||++.|+ |+...+. ...-...|..|.||||||.
T Consensus 210 ~~~~~~~f~~p~~liln~avg~-w~g~~~~-~~~~~~~p~~m~VDYVRvy 257 (258)
T cd02178 210 EITDGTGFDQPMYIIIDTETYD-WRGEPTD-EELADDSKNTFYVDYVRVY 257 (258)
T ss_pred ccCcCCcCCCCeEEEEEecccc-CCCCCCc-cccCCCCCCeEEEEEEEEe
Confidence 22355 89999999999998 9821111 1122346999999999985
No 9
>cd02177 GH16_kappa_carrageenase Kappa-carrageenase, member of glycosyl hydrolase family 16. Kappa-carrageenase is a glycosyl hydrolase family 16 (GH16) member that hydrolyzes the internal beta-1,4-linkage of kappa-carrageenans, a hydrophilic polysaccharide found in the cell wall of Rhodophyceaea, marine red algae. Carrageenans are linear chains of galactose units linked by alternating D-alpha-1,3- and D-beta-1,4-linkages that are additionally modified by a 3,6-anhydro-bridge. Depending on the position and number of sulfate ester modifications they are subdivided into kappa-, iota-, and lambda-carrageenases, kappa being modified once. Carrageenans form thermo-reversible gels widely used for industrial applications. Kappa-carrageenases exist in bacteria belonging to at least three phylogenetically distant branches, including pseudoalteromonas, planctomycetes, and baceroidetes. This domain adopts a curved beta-sandwich conformation, with a tunnel-shaped active site cavity, referred to
Probab=99.95 E-value=1.1e-26 Score=219.52 Aligned_cols=172 Identities=21% Similarity=0.234 Sum_probs=125.6
Q ss_pred CCceEEeCCCcEEEEEEeCC-------------------CCceeEeeceeEEeEEEEEEEecC-CCCCceEEEEEEeeCC
Q 020504 42 HDNLVVHTDGKSVHLSLDER-------------------TGSGFVSHDLYLHGFFSASIKLPA-DYTAGVVVAFYMSNGD 101 (325)
Q Consensus 42 ~~~v~~~~~G~~l~L~ld~~-------------------sGa~~~Sk~~y~YG~fear~Klp~-g~s~Gvv~Af~l~s~~ 101 (325)
++||.+. +| .|.|+..+. +++.+.|+..|+||+||||||+++ + +|+||||||+++.
T Consensus 43 ~~Nv~v~-dG-~L~i~a~~e~~~~~~~~~~~~~~~~~~ytSg~~~t~~~~~YG~~EaRik~~p~~--~G~wpAfW~~~~~ 118 (269)
T cd02177 43 EKNVVIS-NG-ILELTMRRNANNTTFWDQQQVPDGPTYFTSGIFKSYAKGTYGYYEARIKGADIF--PGVCPSFWLYSDI 118 (269)
T ss_pred ccceEEe-CC-EEEEEEEeccCCCcccccccccCCCCCEeeEEEEecCcceeeEEEEEEECCCCC--CceEeEEEEeccC
Confidence 4677664 45 688877653 346778899999999999999865 5 9999999999862
Q ss_pred C------CCCCCCeeeE-EEcCCc---CCCCe----EEEeeEEcCCcccC--------CcceEEecCCCCCCCcEEEEEE
Q 020504 102 M------FEKNHDEIDF-EFLGNI---RGKDW----RIQTNIYGNGSTSI--------GREERYNLWFDPSDDFHQYSIL 159 (325)
Q Consensus 102 ~------~~~~~dEIDi-EfLG~~---~g~p~----~vqTNv~~~G~~~~--------~~e~~~~l~fDpt~dFHtYsId 159 (325)
. .||.++|||| |.+|.. .+++. .+|++++.+|.... .....+.+++|++++||+|+|+
T Consensus 119 ~~~~~~~gwp~~GEIDImE~~g~~~~~~~~~~~~~~~~H~~~~~~g~g~w~~~~~~~~~~~~~~~~~~d~~~~fH~y~v~ 198 (269)
T cd02177 119 DYSVANEGEVVYSEIDVVELQQFDWYHQDDIRDMDHNLHAIVKENGQGVWKRPKMYPPTEQLNYHRPFDPSKDFHTYGCN 198 (269)
T ss_pred CCCcccCCCCCCCeEEEEEEecCCccccccccccceEEEEeEecCCcccccCccccccccceEEccCCCCccCcEEEEEE
Confidence 1 3788999999 777753 12333 45555555543211 1123467889999999999999
Q ss_pred eCccceEEEeecccC---CCCCCCCCceeEEeeccCC---------CCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 160 WTDSQIMEFKRTASM---GGDFPAKPMSLYATIWDGS---------DWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 160 Wtpd~IR~~~~~~~~---g~~~P~~Pm~l~lniW~gg---------~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
|+|++|+||+|++.. ...+...||.|.+++=... .|+ |+ ..+.+..|-.|+||+|||.
T Consensus 199 W~~~~i~~yvDg~~~~~~~~~~w~~~~~~~~~~~~~~p~~~~~~~~~~~--~~--~~~~~~fP~~m~VDyVRv~ 268 (269)
T cd02177 199 VNQDEIIWYVDGVEVGRKPNKYWHRPMNVTLSLGLRKPFVKFFDNKNNA--KA--REKASDFPTSMYVDYVRVW 268 (269)
T ss_pred EeCCEEEEEECCEEEEEEcCCccccccEEeeccccCcchhhhhccccCC--CC--CCccCcCCceEEEEEEEEe
Confidence 999999999998742 2345578999998874322 365 44 3566789999999999985
No 10
>cd02180 GH16_fungal_KRE6_glucanase Saccharomyces cerevisiae KRE6 and related glucanses, member of glycosyl hydrolase family 16. KRE6 is a Saccharomyces cerevisiae glucanase that participates in the synthesis of beta-1,6-glucan, a major structural component of the cell wall. It is a golgi membrane protein required for normal beta-1,6-glucan levels in the cell wall. KRE6 is closely realted to laminarinase, a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans.
Probab=99.93 E-value=9e-25 Score=209.05 Aligned_cols=178 Identities=17% Similarity=0.199 Sum_probs=120.2
Q ss_pred ccccCCceEEeCCCcEEEEEEeCC-------CCceeEe--eceeEEeEEEEEEEecCC-CCCceEEEEEEeeCCC-----
Q 020504 38 HLFGHDNLVVHTDGKSVHLSLDER-------TGSGFVS--HDLYLHGFFSASIKLPAD-YTAGVVVAFYMSNGDM----- 102 (325)
Q Consensus 38 ~~w~~~~v~~~~~G~~l~L~ld~~-------sGa~~~S--k~~y~YG~fear~Klp~g-~s~Gvv~Af~l~s~~~----- 102 (325)
..+.++|+.+. +| .|.|+..+. +.+.|.| |+.|+||+||||||||.+ ...|+||||||+++..
T Consensus 36 q~Y~~~nv~v~-~G-~L~I~a~~~~~~~~~ytSg~i~T~~k~~f~yG~~EaR~klp~~~~~~G~WPAfWmlg~~~~~~~~ 113 (295)
T cd02180 36 EWYDPDAVTTI-NG-SLRITMDQFRNHGLNFRSGMLQSWNKLCFTGGYIEASASLPGKPDVSGLWPAVWTMGNLGRPGYL 113 (295)
T ss_pred EEecCcCeEec-CC-eEEEEEEeecCCCCCEEEEEEEECCcceeeCCEEEEEEECCCCCCCCCcceeeeccccccccccc
Confidence 34556788775 45 688877643 3567777 678899999999999973 2499999999999631
Q ss_pred -----CCCC------CCeeeE-EEcCCcCC-CCeE---EEe----------------eEEcC-----CcccCCcce-EE-
Q 020504 103 -----FEKN------HDEIDF-EFLGNIRG-KDWR---IQT----------------NIYGN-----GSTSIGREE-RY- 143 (325)
Q Consensus 103 -----~~~~------~dEIDi-EfLG~~~g-~p~~---vqT----------------Nv~~~-----G~~~~~~e~-~~- 143 (325)
.||. .+|||| |.+|.+.. .... +|. .+|.. +...++..+ ..
T Consensus 114 ~~~~~~WP~~~~~~~~GEIDImE~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 193 (295)
T cd02180 114 ATTEGVWPYSYDGRGAPEIDIIEAQVGNGLGIGQVSQSLQVAPFDAWYRPDYSSDFVTIYNDTTTIMNTYTGGVFQQAIS 193 (295)
T ss_pred ccccCCCCcccccCCCCcEEEEeeecCCCCcCceEeeEEeeccccccccCCCCccceEEecCcccccccccCCccccccc
Confidence 2674 499998 99985431 1111 111 11211 000001000 00
Q ss_pred ---ecCC----CCCCCcEEEEEEeCc-----cceEEEeeccc--------C---C----CCCCCCCceeEEeeccCCCCC
Q 020504 144 ---NLWF----DPSDDFHQYSILWTD-----SQIMEFKRTAS--------M---G----GDFPAKPMSLYATIWDGSDWA 196 (325)
Q Consensus 144 ---~l~f----Dpt~dFHtYsIdWtp-----d~IR~~~~~~~--------~---g----~~~P~~Pm~l~lniW~gg~WA 196 (325)
.+.. ...++||+|+|+|+| +.|+||+|++. . + ..+|.+||+|+||+..||+|+
T Consensus 194 ~~~~~~~~~~~~~~~~fHtY~veW~~~~~~~~~I~wyvDg~~~~~~~~~~~~~~~~~~~~~~~~~P~ylILNlAvGg~w~ 273 (295)
T cd02180 194 CVTRLNDSWYPGNGNEFQTYGFEYRPDDEDDGYITWFVDDEPTWTIYAKALGPNGNIGWRIIPEEPMYIILNLGISSNFQ 273 (295)
T ss_pred cccccCCccccccCCCcEEEEEEEecCCCCCCEEEEEECCEEEEEEehHHcCCcccccccccCCCCeEEEEEEEeccccC
Confidence 1111 136899999999999 89999999851 0 1 136799999999999999997
Q ss_pred CCCCccccCCCCCcEEEEEcEEEEe
Q 020504 197 TNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 197 t~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
|. +.+-...|..|+||+|||+
T Consensus 274 ---g~-~~~~~~~P~~m~VDyVRVY 294 (295)
T cd02180 274 ---DI-DWDELQFPATMRIDYVRVY 294 (295)
T ss_pred ---CC-CcccCCCCCEEEEEEEEEE
Confidence 42 3455678999999999996
No 11
>cd02182 GH16_Strep_laminarinase_like Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel.
Probab=99.92 E-value=1.8e-24 Score=202.69 Aligned_cols=176 Identities=15% Similarity=0.114 Sum_probs=118.5
Q ss_pred ccCCceEEeCCCcEEEEEEeCC-----CCceeEeecee--EE----eEEEEEEEecCCC---CCceEEEEEEeeCCC---
Q 020504 40 FGHDNLVVHTDGKSVHLSLDER-----TGSGFVSHDLY--LH----GFFSASIKLPADY---TAGVVVAFYMSNGDM--- 102 (325)
Q Consensus 40 w~~~~v~~~~~G~~l~L~ld~~-----sGa~~~Sk~~y--~Y----G~fear~Klp~g~---s~Gvv~Af~l~s~~~--- 102 (325)
++++|+.+..+| .|.|+..+. +.++|.|+..+ .| |+||||||+|.+. ..|+||||||++.+.
T Consensus 43 ~~~~n~~v~~dG-~L~I~a~~~~~~~ytSg~i~s~~~~~~~~~gg~~~~EaRik~p~~~~~~~~G~wPAfWll~~~~~~~ 121 (259)
T cd02182 43 NSTANVQLSGNG-TLQITPLRDGSGKWTSGRIETTRTDFAAPPGGKLRVEASIRLGDVPGSNQQGIWPAFWMLGDSYRGN 121 (259)
T ss_pred CCCcCEEEcCCC-eEEEEEEecCCCCEEEEEEEECCccccccCCCcEEEEEEEECCCCcccCCCCcCeeeeccCCCccCC
Confidence 456788876456 687876544 24567776554 33 4999999999742 379999999999752
Q ss_pred --CCCCCCeeeE-EEcCCcCCCCeEEEeeEEcCCcccCCcceEEec--CCCCCCCcEEEEEEeCc-----cceEEEeecc
Q 020504 103 --FEKNHDEIDF-EFLGNIRGKDWRIQTNIYGNGSTSIGREERYNL--WFDPSDDFHQYSILWTD-----SQIMEFKRTA 172 (325)
Q Consensus 103 --~~~~~dEIDi-EfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l--~fDpt~dFHtYsIdWtp-----d~IR~~~~~~ 172 (325)
.||..+|||| |..|.. +...+|..+........++..... ...+.++||+|+|+|++ +.|+||+|++
T Consensus 122 ~~~WP~~GEIDImE~~~~~---~~~~~t~H~~~~~~~~~~~~~~~~~~~~~~~~~fHtY~veW~~~~~~~~~I~~yvDG~ 198 (259)
T cd02182 122 GTNWPACGELDIMENVNGL---STGYGTLHCGVAPGGPCNEPTGIGAGTRLCDTGFHTYAVEIDRTNGDAESIRWYLDGV 198 (259)
T ss_pred CCCCCccceeeeeeccCCC---CceEEEEeeCCCCCCCCccccCcccCCCCCCCCcEEEEEEEccCCCCCCEEEEEECCE
Confidence 4788999999 999854 334444333321100111111111 12345899999999997 9999999975
Q ss_pred cC----C------C---CCCCCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEe
Q 020504 173 SM----G------G---DFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLH 221 (325)
Q Consensus 173 ~~----g------~---~~P~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~ 221 (325)
.. + . ..|++||+|+||++.||+|+ |..-...-...|-.|.||+|||+
T Consensus 199 ~~~t~~~~~~~~~~~~~~~~~~p~ylIlN~avgg~w~--~~~~~~~~~~~p~~m~VDyVRVy 258 (259)
T cd02182 199 VYHTVTGARVGDETTWQALAHHPLFIILNVAVGGNWP--GAPNGNTATGSGSAMEVDYVAVY 258 (259)
T ss_pred EEEEEehhhcCCCccccCcCCCCeEEEEEEEEeCCcC--CCCCcccccCCCceEEEEEEEEe
Confidence 21 0 1 24589999999999999998 32101112457899999999985
No 12
>COG2273 SKN1 Beta-glucanase/Beta-glucan synthetase [Carbohydrate transport and metabolism]
Probab=99.90 E-value=7.8e-23 Score=199.97 Aligned_cols=172 Identities=24% Similarity=0.353 Sum_probs=130.1
Q ss_pred cccCCceEEeCCCcEEEEEEeC-------CCCceeEeece--eEEeEEEEEEEecCCCCCceEEEEEEeeCCC-CCCCCC
Q 020504 39 LFGHDNLVVHTDGKSVHLSLDE-------RTGSGFVSHDL--YLHGFFSASIKLPADYTAGVVVAFYMSNGDM-FEKNHD 108 (325)
Q Consensus 39 ~w~~~~v~~~~~G~~l~L~ld~-------~sGa~~~Sk~~--y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~-~~~~~d 108 (325)
.|..+++.+..+| .|+|.+++ .+++.++|..+ |+||++|+|||+|.+ +|+|+|||||++.. ++..++
T Consensus 75 ~w~~~~~~lt~~~-~l~l~~~~~~~~~~~y~sG~l~T~~r~~~~YG~~Evrak~~~~--~G~wpafw~~~g~~~dg~wp~ 151 (355)
T COG2273 75 TWYVSNVVLTIGG-TLELDIEKFKINDRDYRSGMLTTYNRFCFTYGTYEVRAKLPLV--SGLWPAFWTLTGLSRDGGWPD 151 (355)
T ss_pred ceeecceeEeeCC-eeeeeechhcccccccccceEEecCcceEeeeEEEEEeccCCC--cccceeeEeccCcccCCCCCc
Confidence 3555566665544 77787765 35678888877 899999999999986 99999999999743 345679
Q ss_pred eeeEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecCC-CCCCCcEEEEEEeCccceEEEeecccC-----CCCCCCCC
Q 020504 109 EIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLWF-DPSDDFHQYSILWTDSQIMEFKRTASM-----GGDFPAKP 182 (325)
Q Consensus 109 EIDiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~f-Dpt~dFHtYsIdWtpd~IR~~~~~~~~-----g~~~P~~P 182 (325)
|||||+||+++. +..+|+|.|.++. ++.+....+.+ +..++||+|.++|.++.|+||++++.. ...+|+.|
T Consensus 152 e~d~e~lgg~~~-~~~i~t~~~~~~~--~~~~~~~~~~~~~~~~~fhty~~~W~~~~i~Wyvdg~~~~~~~~p~~~~~~p 228 (355)
T COG2273 152 EIDIEDLGGQST-NTVIQTNHYQGGG--GGTSKLVDHPNPDAIDGFHTYAFLWGEDSISWYVDGAPVATATKPDYIPQIP 228 (355)
T ss_pred ceeeeeecCCCc-ccceEeeeeccCC--CCceecccccCCCcccccccceeeccCCeEEEEEcceEeeEEeccccCcCCc
Confidence 999999997653 3459999999887 45555556666 899999999999999999999998632 23558999
Q ss_pred ceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEE
Q 020504 183 MSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVL 220 (325)
Q Consensus 183 m~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v 220 (325)
|++++|+|.++.+.++-| .......|. .++++++
T Consensus 229 ~y~~~nl~~~~~~~~~~~--~~~~~~~~~--~~~~~~~ 262 (355)
T COG2273 229 FYVLVNLWMGGYAGGPPG--EALSAGSPL--NIDYYRV 262 (355)
T ss_pred ceeEEeecccCccCCCcc--ccccCCcce--Eeeeeee
Confidence 999999999987653333 233333444 4445554
No 13
>cd08024 GH16_CCF Coelomic cytolytic factor, member of glycosyl hydrolase family 16. Subgroup of glucanases of unknown function that are related to beta-GRP (beta-1,3-glucan recognition protein), but contain active site residues. Beta-GRPs are one group of pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. Beta-GRPs are present in insects and lack all catalytic residues. This subgroup contains related proteins that still contain the active site and are widely distributed in eukaryotes. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members.
Probab=99.89 E-value=2.7e-22 Score=194.74 Aligned_cols=131 Identities=21% Similarity=0.188 Sum_probs=94.8
Q ss_pred ceeEe--eceeEEeEEEEEEEecCCCCCceEEEEEEeeCCC---CCCCCCeeeE-EEcCCcCCCC-------eEEEeeEE
Q 020504 64 SGFVS--HDLYLHGFFSASIKLPADYTAGVVVAFYMSNGDM---FEKNHDEIDF-EFLGNIRGKD-------WRIQTNIY 130 (325)
Q Consensus 64 a~~~S--k~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~---~~~~~dEIDi-EfLG~~~g~p-------~~vqTNv~ 130 (325)
+.|.| |+.|+|||||||||||.| .|+||||||++.+. .||..+|||| |.+|+....+ ..++.++|
T Consensus 102 gri~T~~kf~f~YGrvE~RaKlP~G--~g~WPAfWmlp~~~~yg~WP~sGEIDImE~~Gn~~~~~~~~~~g~~~v~~tlH 179 (330)
T cd08024 102 ARLRTKNSFSFKYGRVEVRAKLPTG--DWLWPAIWMLPRDNVYGGWPRSGEIDIMESRGNRPLYDGGEAIGINSVGSTLH 179 (330)
T ss_pred EEEEeCCccceeceEEEEEEECCCC--CccceeeeecCCccccCCCCCCCcEEEEEEeCCCcccccccccCcceEEEEEE
Confidence 45666 577899999999999998 99999999999753 3888999998 9999854221 13555555
Q ss_pred cCCcccC--Ccc---eEEecCCCCCCCcEEEEEEeCccceEEEeecccC----------------------------CCC
Q 020504 131 GNGSTSI--GRE---ERYNLWFDPSDDFHQYSILWTDSQIMEFKRTASM----------------------------GGD 177 (325)
Q Consensus 131 ~~G~~~~--~~e---~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~~----------------------------g~~ 177 (325)
....... .+. .......+.+++||+|+|+|+|++|++|+|++.. +..
T Consensus 180 ~g~~~~~~~~~~~~~~~~~~~~~~~~~FHtY~veWtpd~I~fyVDG~~~~~v~~~~~~~w~~g~~~~~~~~~~w~~~~~~ 259 (330)
T cd08024 180 WGPDPGQNRYTKTTGKRSDSGGDFADDFHTYGLDWTPDHIRFYVDDRLILTLDVPGQGFWEFGGFSGTPIDNPWAGGGKM 259 (330)
T ss_pred eCCCCCCCccccccceeccCCCCcccCCEEEEEEEeCCEEEEEECCEEEEEEecCCCCceeeccccccccCCcccccCcC
Confidence 3221100 111 1112335678999999999999999999997521 112
Q ss_pred CC-CCCceeEEeeccCCCCC
Q 020504 178 FP-AKPMSLYATIWDGSDWA 196 (325)
Q Consensus 178 ~P-~~Pm~l~lniW~gg~WA 196 (325)
.| ++|++|+||+..||.|.
T Consensus 260 aPFd~~fyliLNvAVGG~~~ 279 (330)
T cd08024 260 APFDQEFYLILNVAVGGTNG 279 (330)
T ss_pred CCCCCCEEEEEEEEecCCCC
Confidence 46 78899999999998874
No 14
>cd02179 GH16_beta_GRP beta-1,3-glucan recognition protein, member of glycosyl hydrolase family 16. Beta-GRP (beta-1,3-glucan recognition protein) is one of several pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. They are present in insects and lack all catalytic residues. This subgroup also contains related proteins of unknown function that still contain the active site. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members.
Probab=99.87 E-value=8.8e-22 Score=190.56 Aligned_cols=128 Identities=18% Similarity=0.133 Sum_probs=88.1
Q ss_pred ceeEee--ceeEEeEEEEEEEecCCCCCceEEEEEEeeCCC-C--C-CCCCeeeE-EEcCCcCCCC---eEEEeeEEcCC
Q 020504 64 SGFVSH--DLYLHGFFSASIKLPADYTAGVVVAFYMSNGDM-F--E-KNHDEIDF-EFLGNIRGKD---WRIQTNIYGNG 133 (325)
Q Consensus 64 a~~~Sk--~~y~YG~fear~Klp~g~s~Gvv~Af~l~s~~~-~--~-~~~dEIDi-EfLG~~~g~p---~~vqTNv~~~G 133 (325)
|.|.|+ +.|+|||||||||||.| .|+||||||++.+. + | |..+|||| |.+||..... .+..+.+|..-
T Consensus 99 ari~Tk~~f~f~YGrvEvRAKlP~G--dglWPAiWmlP~~~~yg~w~P~sGEIDImE~~Gn~~~~~~g~~~~~~~l~~g~ 176 (321)
T cd02179 99 ARINTKNSFAFKYGRVEIRAKLPKG--DWIYPELLLEPVNNYYGSSDYASGQIRIAFARGNAVLRADGTDIGGKKLYGGP 176 (321)
T ss_pred eeEEECCcEeEeccEEEEEEEccCC--CCcccceeecccccccCCCCCCCCeEEEEEeCCCCccccCCceeccceEEccc
Confidence 566674 67899999999999998 99999999999864 2 3 78899999 9999853110 11112222211
Q ss_pred cc---cCCcc---eEEecCCCCCCCcEEEEEEeCccceEEEeecccC-------C------------------CCCC-CC
Q 020504 134 ST---SIGRE---ERYNLWFDPSDDFHQYSILWTDSQIMEFKRTASM-------G------------------GDFP-AK 181 (325)
Q Consensus 134 ~~---~~~~e---~~~~l~fDpt~dFHtYsIdWtpd~IR~~~~~~~~-------g------------------~~~P-~~ 181 (325)
.. ...+. .......+.+++||+|+|+|+|+.|++|+|++.. + ...| ++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~ddFHtY~leWtpd~I~f~VDg~~~~~~~~~~~~~~~~~~~~~~~~w~~g~~~aPFD~ 256 (321)
T cd02179 177 VLTDAEPHRSANLKTKINNELWSDDFHVYTLEWKPDGITLMVDGEEYGEIEPGEGGYSEAANNPAASRWLGGTVMAPFDK 256 (321)
T ss_pred ccCCCcccccccccccCCCCccccCcEEEEEEEeCCEEEEEECCEEEEEEecCcCccccccccccCccccccCccCCCCC
Confidence 00 00010 1111234678999999999999999999998521 0 1246 78
Q ss_pred CceeEEeeccCC
Q 020504 182 PMSLYATIWDGS 193 (325)
Q Consensus 182 Pm~l~lniW~gg 193 (325)
|++|+||+++||
T Consensus 257 ~FyliLNlAVGG 268 (321)
T cd02179 257 EFYLSLGVGVGG 268 (321)
T ss_pred CeEEEEEEEecC
Confidence 999999999887
No 15
>PF06955 XET_C: Xyloglucan endo-transglycosylase (XET) C-terminus; InterPro: IPR010713 This entry represents the C terminus (approximately 60 residues) of plant xyloglucan endo-transglycosylase (XET). Xyloglucan is the predominant hemicellulose in the cell walls of most dicotyledons. With cellulose, it forms a network that strengthens the cell wall. XET catalyses the splitting of xyloglucan chains and the linking of the newly generated reducing end to the non-reducing end of another xyloglucan chain, thereby loosening the cell wall []. ; GO: 0016762 xyloglucan:xyloglucosyl transferase activity, 0006073 cellular glucan metabolic process, 0005618 cell wall, 0048046 apoplast; PDB: 1UMZ_A 1UN1_B 2VH9_B 2UWC_A 2UWB_B 2UWA_C.
Probab=99.76 E-value=4.1e-19 Score=128.33 Aligned_cols=43 Identities=37% Similarity=0.607 Sum_probs=34.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhhcCeEEcccccCCCCCCC-CCcc
Q 020504 240 SSKVSIPTGVSPSQRIKMENFRRKHMTYSYCYDQIRYKVP-PFEC 283 (325)
Q Consensus 240 ~~~~~~~~~L~~~q~~~~~~vr~~ymiYdYC~D~~R~p~~-p~EC 283 (325)
|++...++ ||++|+++|+|||+||||||||+|++|||.. |+||
T Consensus 8 w~~~~~~~-L~~~q~~~m~wvr~~ymiYdYC~D~~Rfp~~~P~EC 51 (51)
T PF06955_consen 8 WWNQPYAQ-LSAKQRRQMRWVRRNYMIYDYCTDTKRFPNPLPPEC 51 (51)
T ss_dssp GGCSCCCS---HHHHHHHHHHHHHCEEEEGGG-TTT-SGCGSTTH
T ss_pred cccCcccC-CCHHHHHHHHHHHHcCeEecccCCCCcCCCCCCCCC
Confidence 44444456 9999999999999999999999999999984 9999
No 16
>PF03935 SKN1: Beta-glucan synthesis-associated protein (SKN1); InterPro: IPR005629 This family consists of the beta-glucan synthesis-associated proteins KRE6 and SKN1. Beta1,6-Glucan is a key component of the yeast cell wall, interconnecting cell wall proteins, beta1,3-glucan, and chitin. It has been postulated that the synthesis of beta1,6-glucan begins in the endoplasmic reticulum with the formation of protein-bound primer structures and that these primer structures are extended in the Golgi complex by two putative glucosyltransferases that are functionally redundant, Kre6 and Skn1. This is followed by maturation steps at the cell surface and by coupling to other cell wall macromolecules [].
Probab=99.42 E-value=1.5e-12 Score=131.73 Aligned_cols=172 Identities=19% Similarity=0.234 Sum_probs=110.6
Q ss_pred CCceEEeCCCcEEEEEEeCCC-------CceeEe--eceeEEeEEEEEEEecCC-CCCceEEEEEEeeCCC---C-----
Q 020504 42 HDNLVVHTDGKSVHLSLDERT-------GSGFVS--HDLYLHGFFSASIKLPAD-YTAGVVVAFYMSNGDM---F----- 103 (325)
Q Consensus 42 ~~~v~~~~~G~~l~L~ld~~s-------Ga~~~S--k~~y~YG~fear~Klp~g-~s~Gvv~Af~l~s~~~---~----- 103 (325)
++.|.. .+| .|.|++++.. ++-++| |+=|.-|++|++++||.. +.+|+|||||+|++=. +
T Consensus 160 p~~vtt-~~G-~l~i~~~~~~~~~~~y~sgm~qsWNkfCftgG~~e~~~~lPg~~~~~G~WP~~W~mGNLgRagy~ast~ 237 (504)
T PF03935_consen 160 PDAVTT-ENG-SLVITLDAFPNHNLNYRSGMLQSWNKFCFTGGYIEVSASLPGSPDVSGLWPAFWTMGNLGRAGYGASTD 237 (504)
T ss_pred CCCcEe-eCC-EEEEEEEeeeccceeEecchhhhhhhhhcCCcEEEEEEECCCCCcCCCcCchhhhccccCccccccccC
Confidence 445544 344 8999998643 233455 555678999999999853 5789999999998611 0
Q ss_pred --CC---------------------------------------------CCCeeeE-EEcCCcCC-CC---eEEEeeEEc
Q 020504 104 --EK---------------------------------------------NHDEIDF-EFLGNIRG-KD---WRIQTNIYG 131 (325)
Q Consensus 104 --~~---------------------------------------------~~dEIDi-EfLG~~~g-~p---~~vqTNv~~ 131 (325)
|| ..-|||| |-...... .+ ..+|..=|.
T Consensus 238 g~WPySYd~Cd~g~~~nQt~~~glS~lpgqrlsaCtc~gedhp~p~~GRgAPEIDilE~~~~~~~~~g~~SqS~Q~AP~d 317 (504)
T PF03935_consen 238 GMWPYSYDSCDVGTTPNQTSPDGLSYLPGQRLSACTCPGEDHPGPGVGRGAPEIDILEAQVGAGPGVGVVSQSLQVAPFD 317 (504)
T ss_pred ceecccccccCcccccCccccCccccCCCCcCcCCCCCCCcCCCCCCCCCCCceeEEeeeecccccccccccceeecccc
Confidence 10 1259998 87643221 11 123322110
Q ss_pred -------------CCcc------cCCcce-EE----ecCCC-----CCCCcEEEEEEeCcc-----ceEEEeeccc----
Q 020504 132 -------------NGST------SIGREE-RY----NLWFD-----PSDDFHQYSILWTDS-----QIMEFKRTAS---- 173 (325)
Q Consensus 132 -------------~G~~------~~~~e~-~~----~l~fD-----pt~dFHtYsIdWtpd-----~IR~~~~~~~---- 173 (325)
+... .|+.-| .+ .+..+ ...+||+|++||.|. .|||+++++.
T Consensus 318 ~~y~~~~~~~~i~~~~~T~~N~Y~Gg~~QqAiSa~t~ln~~~Y~~~~~~~f~~YgfEy~Pg~~~~GYItW~vdg~~twti 397 (504)
T PF03935_consen 318 IWYRPDYDFYEIYNPSITQMNTYTGGVYQQAISALTQLNNDWYEEEDGGCFQTYGFEYKPGDGDDGYITWFVDGEPTWTI 397 (504)
T ss_pred cCCCCCCCceEEeCCCCceeccccChhhhhhhhcCcccCccccccCCCCceEEEEEEEEeCCCCCeEEEEEECCEEEEEE
Confidence 0000 011111 11 12112 338899999999874 6899999751
Q ss_pred ----C---C----CCCCCCCceeEEeeccCCCCCCCCCccccCCC--CCcEEEEEcEEEEe
Q 020504 174 ----M---G----GDFPAKPMSLYATIWDGSDWATNGGKYRVNYK--YAPYVTEFSDFVLH 221 (325)
Q Consensus 174 ----~---g----~~~P~~Pm~l~lniW~gg~WAt~GG~~~id~s--~aPf~a~v~~v~v~ 221 (325)
. + -.+|..||+|++|+-...+|+ .+||. ..|.+|.||+|||+
T Consensus 398 ~a~Al~~~~~I~~R~Ip~EPMyIIlNlgmS~sf~------~vd~~~L~FP~~M~IDYVRVY 452 (504)
T PF03935_consen 398 NAEALGPNPNIGQRPIPEEPMYIILNLGMSSSFG------YVDWNHLCFPATMRIDYVRVY 452 (504)
T ss_pred EhhhcCCCCCcCccccCcCCceeeeccccccccC------ccccccccccceEEEeEEEEe
Confidence 1 1 257899999999999999996 57886 58899999999997
No 17
>cd02181 GH16_fungal_Lam16A_glucanase fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A. Group of fungal 1,3(4)-beta-D-glucanases, similar to Phanerochaete chrysosporium laminarinase 16A. Lam16A belongs to the 'nonspecific' 1,3(4)-beta-glucanase subfamily, although beta-1,6 branching and beta-1,4 bonds specifically define where Lam16A hydrolyzes its substrates, like curdlan (beta-1,3-glucan), lichenin (beta-1,3-1,4-mixed linkage glucan), and laminarin (beta-1,6-branched-1,3-glucan).
Probab=99.37 E-value=5.6e-12 Score=120.53 Aligned_cols=143 Identities=27% Similarity=0.353 Sum_probs=96.1
Q ss_pred CceEEeCCCcEEEEEEeCCC---------CceeEeeceeEEeEEEEEE-EecCCCCCceEEEEEEeeCCCCCCCCCeeeE
Q 020504 43 DNLVVHTDGKSVHLSLDERT---------GSGFVSHDLYLHGFFSASI-KLPADYTAGVVVAFYMSNGDMFEKNHDEIDF 112 (325)
Q Consensus 43 ~~v~~~~~G~~l~L~ld~~s---------Ga~~~Sk~~y~YG~fear~-Klp~g~s~Gvv~Af~l~s~~~~~~~~dEIDi 112 (325)
+.+.+ ++| .|.|.+|... .++|.||..|.||+|++|+ |||.| .|+||||||++. .||..+||||
T Consensus 42 gL~~v-~~g-~l~i~vd~t~~~~~~~gr~S~ri~sk~~f~~g~~~~~~~~~P~g--~G~WPAfW~~g~--~WP~~GEIDI 115 (293)
T cd02181 42 GLAYV-NSG-NVYLGVDSTTTLPSGAGRNSVRIESKKTYNTGLFIADIAHMPGG--CGTWPAFWTVGP--NWPNGGEIDI 115 (293)
T ss_pred CCeEe-eCC-eEEEEEeceeccCCCCCceEEEEEEeceeecceEEEEhhhCCCC--CCccchhhhcCC--CCCCCCcEEE
Confidence 34444 344 6888887643 3468899999999999997 99997 999999999987 4899999998
Q ss_pred -EEcCCcCCCCeEEEeeEEcC-Ccc-------cC-------------Ccc--------eEEecCCCCCCCcEEEEEEeCc
Q 020504 113 -EFLGNIRGKDWRIQTNIYGN-GST-------SI-------------GRE--------ERYNLWFDPSDDFHQYSILWTD 162 (325)
Q Consensus 113 -EfLG~~~g~p~~vqTNv~~~-G~~-------~~-------------~~e--------~~~~l~fDpt~dFHtYsIdWtp 162 (325)
|.++..+. .|..+|.. |-. ++ +.. ..+-..|+ +..=-.|+++|+.
T Consensus 116 mE~vn~~~~----n~~tlHt~~gC~i~~~~~~tg~~~~~nC~~~~~~n~GC~v~~~~~~syG~~FN-~~GGGvyA~ew~~ 190 (293)
T cd02181 116 IEGVNLQTS----NQMTLHTGPGCTISNSGSFTGTVTTTNCDVNQNGNAGCGVTSTSTNSYGAGFN-AAGGGVYAMEWTS 190 (293)
T ss_pred EeccCCCCc----eEEEEecCCCEEcCCCCCccCcccCCCcCCCCCCCCCceeecCCCCccccccc-cCCCcEEEEEEcc
Confidence 99986432 33334432 110 00 000 00112232 2345789999999
Q ss_pred cceEEE--eeccc-------------CC---CCCCC---------CCceeEEeeccCCCCC
Q 020504 163 SQIMEF--KRTAS-------------MG---GDFPA---------KPMSLYATIWDGSDWA 196 (325)
Q Consensus 163 d~IR~~--~~~~~-------------~g---~~~P~---------~Pm~l~lniW~gg~WA 196 (325)
+.||++ -++.. -| ..||. ++++|++++=-=|+||
T Consensus 191 ~~I~vWff~R~~iP~di~~~~pdPs~WG~P~A~f~~~~Cdi~~~F~~~~iVfn~tfCGdwA 251 (293)
T cd02181 191 DGIKVWFFPRGSIPADITSGSPDPSTWGTPAASFPGSSCDIDSFFKDQRIVFDTTFCGDWA 251 (293)
T ss_pred CcEEEEEecCCCCCcccccCCCCCcccCcccccCCCCCCChhHhcccCEEEEEeecccccc
Confidence 999754 23220 01 34664 7899999998889999
No 18
>PF10287 DUF2401: Putative TOS1-like glycosyl hydrolase (DUF2401); InterPro: IPR018805 This entry represents a family of proteins conserved primarily in fungi. One member is annotated putatively as OPEL, a house-keeping protein, but this could not be confirmed. It contains 5 highly conserved cysteines two of which form a characteristic CGC sequence motif.
Probab=85.32 E-value=5.7 Score=37.49 Aligned_cols=85 Identities=18% Similarity=0.341 Sum_probs=51.4
Q ss_pred EEEEEEecCCC-----CCceEEEEEEeeCCC-----C-------CC-CCCeeeE-EEcCCcCCCCeEEEeeEEc-CCccc
Q 020504 77 FSASIKLPADY-----TAGVVVAFYMSNGDM-----F-------EK-NHDEIDF-EFLGNIRGKDWRIQTNIYG-NGSTS 136 (325)
Q Consensus 77 fear~Klp~g~-----s~Gvv~Af~l~s~~~-----~-------~~-~~dEIDi-EfLG~~~g~p~~vqTNv~~-~G~~~ 136 (325)
|-+++++|... ...=.||+||++..+ + |. .++|.|| |+|.... . .+-+.+|. +|...
T Consensus 103 Flfef~MP~~~~~~~~~~~DmPAIWlLNA~IpRT~QY~~~~CSCW~sGCGEfDifEVl~~g~--~-k~~St~H~~qG~~~ 179 (235)
T PF10287_consen 103 FLFEFSMPHETDGGSGFNYDMPAIWLLNAQIPRTSQYGNAGCSCWKSGCGEFDIFEVLNSGD--D-KLKSTFHDYQGTDD 179 (235)
T ss_pred EEEEEECCCCcCCCCCCCCCcChhHhccccCcchhhcCCCCCCccCCCcccceeeeeccCCC--c-eeEEEEecccCccc
Confidence 55667777621 245689999999753 2 33 5899998 9997633 2 56666664 45311
Q ss_pred CCcceEEecCCC-CCCCcEEEEEEeCccc
Q 020504 137 IGREERYNLWFD-PSDDFHQYSILWTDSQ 164 (325)
Q Consensus 137 ~~~e~~~~l~fD-pt~dFHtYsIdWtpd~ 164 (325)
......-.-.|. |++..-++++.++.+.
T Consensus 180 ~~~g~G~~~yf~RPt~~~~k~aVifd~~~ 208 (235)
T PF10287_consen 180 INGGGGSSDYFKRPTSGTMKVAVIFDSSG 208 (235)
T ss_pred cCCCCCCCCcccCCCCCCeEEEEEEcCCC
Confidence 001111111233 7788899999996543
No 19
>KOG1834 consensus Calsyntenin [Extracellular structures]
Probab=52.59 E-value=1.1e+02 Score=33.41 Aligned_cols=48 Identities=17% Similarity=0.396 Sum_probs=38.0
Q ss_pred CCCCcEEEEEEeCccceEEEeeccc-----CCCCCCCCCceeEEeeccCCCCC
Q 020504 149 PSDDFHQYSILWTDSQIMEFKRTAS-----MGGDFPAKPMSLYATIWDGSDWA 196 (325)
Q Consensus 149 pt~dFHtYsIdWtpd~IR~~~~~~~-----~g~~~P~~Pm~l~lniW~gg~WA 196 (325)
-.++||-|.+.-+--.+..|+|+.+ ...+||-.|.++-.-+=.|.-|-
T Consensus 440 CD~EWH~Y~ln~efp~VtlyvDG~Sfep~~i~ddwplHpsk~~tqLvVGACW~ 492 (952)
T KOG1834|consen 440 CDNEWHHYVLNVEFPDVTLYVDGKSFEPPLITDDWPLHPSKIETQLVVGACWQ 492 (952)
T ss_pred hhhhhheeEEeecCceEEEEEcCcccCCceeccCCccCcccccceeEEeeecc
Confidence 4588999999888766899999864 35789977877777777777887
No 20
>PHA02724 hydrophobic IMV membrane protein; Provisional
Probab=38.56 E-value=25 Score=25.69 Aligned_cols=21 Identities=29% Similarity=0.490 Sum_probs=18.1
Q ss_pred CeeecchHHHHHHHHHHHhhc
Q 020504 1 MVVSYEGCFLLVFSLLAVVAS 21 (325)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (325)
|+-.||-.+|+..+|.+++++
T Consensus 1 MItnYeP~iL~~i~~~al~~N 21 (53)
T PHA02724 1 MISNYEPLLLLVITCCVLLFN 21 (53)
T ss_pred CCcccccHHHHHHHHHHHHHH
Confidence 788999999999998888753
No 21
>PHA03047 IMV membrane receptor-like protein; Provisional
Probab=38.39 E-value=25 Score=25.67 Aligned_cols=21 Identities=33% Similarity=0.510 Sum_probs=18.1
Q ss_pred CeeecchHHHHHHHHHHHhhc
Q 020504 1 MVVSYEGCFLLVFSLLAVVAS 21 (325)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (325)
|+-.||-.+|+..+|.+++++
T Consensus 1 MItnYeP~iL~~i~~~al~~N 21 (53)
T PHA03047 1 MITNYEPLILLGIICIALLAN 21 (53)
T ss_pred CCcccccHHHHHHHHHHHHHH
Confidence 788999999999998888753
No 22
>PF13385 Laminin_G_3: Concanavalin A-like lectin/glucanases superfamily; PDB: 4DQA_A 1N1Y_A 1MZ6_A 1MZ5_A 1N1S_A 2A75_A 1WCS_A 1N1T_A 1N1V_A 2FHR_A ....
Probab=37.76 E-value=2.1e+02 Score=22.75 Aligned_cols=60 Identities=15% Similarity=0.355 Sum_probs=35.2
Q ss_pred CCCCcEEEEEEeCccceEEEeecccCCC-CCC-----CCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEee
Q 020504 149 PSDDFHQYSILWTDSQIMEFKRTASMGG-DFP-----AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHG 222 (325)
Q Consensus 149 pt~dFHtYsIdWtpd~IR~~~~~~~~g~-~~P-----~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~~ 222 (325)
+...+|..++.|..+.++.|+|++.... ..+ .....+.+ |... ....+|...+++|+|..
T Consensus 83 ~~~~W~~l~~~~~~~~~~lyvnG~~~~~~~~~~~~~~~~~~~~~i----G~~~----------~~~~~~~g~i~~~~i~~ 148 (157)
T PF13385_consen 83 PDNKWHHLALTYDGSTVTLYVNGELVGSSTIPSNISLNSNGPLFI----GGSG----------GGSSPFNGYIDDLRIYN 148 (157)
T ss_dssp -TT-EEEEEEEEETTEEEEEETTEEETTCTEESSSSTTSCCEEEE----SS-S----------TT--B-EEEEEEEEEES
T ss_pred CCCCEEEEEEEEECCeEEEEECCEEEEeEeccCCcCCCCcceEEE----eecC----------CCCCceEEEEEEEEEEC
Confidence 3589999999999999999999864221 111 11122222 1111 22578999999999973
No 23
>PF06269 DUF1029: Protein of unknown function (DUF1029); InterPro: IPR009372 This entry is represented by Vaccinia virus, A14.5L; it is a family of uncharacterised viral proteins.
Probab=33.14 E-value=35 Score=25.02 Aligned_cols=21 Identities=33% Similarity=0.447 Sum_probs=17.9
Q ss_pred CeeecchHHHHHHHHHHHhhc
Q 020504 1 MVVSYEGCFLLVFSLLAVVAS 21 (325)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (325)
|+-.||-.+|+..++.+++++
T Consensus 1 MItnYeP~iL~~i~~~al~~N 21 (53)
T PF06269_consen 1 MITNYEPLILLGIICAALLAN 21 (53)
T ss_pred CCcccccHHHHHHHHHHHHHH
Confidence 788999999999988888753
No 24
>PHA02679 ORF091 IMV membrane protein; Provisional
Probab=32.64 E-value=36 Score=24.91 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=17.7
Q ss_pred CeeecchHHHHHHHHHHHhhc
Q 020504 1 MVVSYEGCFLLVFSLLAVVAS 21 (325)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~ 21 (325)
|+-.||-.+|+..+|.+++++
T Consensus 1 MItnYeP~iL~~i~~~al~~N 21 (53)
T PHA02679 1 MVSDYDPAVLVLIFCAALAAN 21 (53)
T ss_pred CCcccccHHHHHHHHHHHHHH
Confidence 788999999999888887753
No 25
>smart00560 LamGL LamG-like jellyroll fold domain.
Probab=28.94 E-value=3.3e+02 Score=22.41 Aligned_cols=67 Identities=7% Similarity=0.042 Sum_probs=40.1
Q ss_pred CCCCCcEEEEEEeCc--cceEEEeecccCCC--CCC-CCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEee
Q 020504 148 DPSDDFHQYSILWTD--SQIMEFKRTASMGG--DFP-AKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHG 222 (325)
Q Consensus 148 Dpt~dFHtYsIdWtp--d~IR~~~~~~~~g~--~~P-~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~~ 222 (325)
++...+|.-++-|+. .+|+.|+|++.... .-| .....+.++. .... ++ ....+|.-.|+.|+|..
T Consensus 58 ~~~~~W~hva~v~d~~~g~~~lYvnG~~~~~~~~~~~~~~~~~~iG~---~~~~--~~-----~~~~~f~G~Idevriy~ 127 (133)
T smart00560 58 DWIGVWVHLAGVYDGGAGKLSLYVNGVEVATSETQPSPSSGNLPQGG---RILL--GG-----AGGENFSGRLDEVRVYN 127 (133)
T ss_pred CCCCCEEEEEEEEECCCCeEEEEECCEEccccccCCcccCCceEEee---eccC--CC-----CCCCCceEEeeEEEEec
Confidence 345889999999998 68999999864321 112 1112222221 0010 11 12358999999999986
Q ss_pred ee
Q 020504 223 CS 224 (325)
Q Consensus 223 c~ 224 (325)
++
T Consensus 128 ~a 129 (133)
T smart00560 128 RA 129 (133)
T ss_pred cc
Confidence 64
No 26
>PF11191 DUF2782: Protein of unknown function (DUF2782); InterPro: IPR021357 This is a bacterial family of proteins whose function is unknown.
Probab=23.21 E-value=3.5e+02 Score=21.90 Aligned_cols=40 Identities=28% Similarity=0.431 Sum_probs=20.9
Q ss_pred EEEEEeCCCCceeEeeceeEE-eEEEEEEEecCCCCCceEEEEEEeeCC
Q 020504 54 VHLSLDERTGSGFVSHDLYLH-GFFSASIKLPADYTAGVVVAFYMSNGD 101 (325)
Q Consensus 54 l~L~ld~~sGa~~~Sk~~y~Y-G~fear~Klp~g~s~Gvv~Af~l~s~~ 101 (325)
.+.++-+..+.. -..|.- |+. -.||+-+. .| +.|||+..+
T Consensus 39 pevti~~~~~~~---ieEyRv~G~l-~~IkV~P~--~G--~~Yyl~d~d 79 (105)
T PF11191_consen 39 PEVTIIEDGGST---IEEYRVNGQL-YMIKVQPK--AG--PPYYLVDPD 79 (105)
T ss_pred CCEEEEecCCcE---EEEEEECCeE-eeEEEEeC--CC--CCEEEECCC
Confidence 344444555533 234443 332 22344443 56 999999875
No 27
>smart00210 TSPN Thrombospondin N-terminal -like domains. Heparin-binding and cell adhesion domain of thrombospondin
Probab=21.81 E-value=5.5e+02 Score=22.52 Aligned_cols=124 Identities=13% Similarity=0.246 Sum_probs=64.2
Q ss_pred EEEEEEecCCCCCceEEEEEEeeCCCCCCCCCeeeEEEcCCcCCCCeEEEeeEEcCCcccCCcceEEecC-C-CCCCCcE
Q 020504 77 FSASIKLPADYTAGVVVAFYMSNGDMFEKNHDEIDFEFLGNIRGKDWRIQTNIYGNGSTSIGREERYNLW-F-DPSDDFH 154 (325)
Q Consensus 77 fear~Klp~g~s~Gvv~Af~l~s~~~~~~~~dEIDiEfLG~~~g~p~~vqTNv~~~G~~~~~~e~~~~l~-f-Dpt~dFH 154 (325)
+.+.+|..+ ...|++-++.-. + ..-++-++.-|... .+. ++..+. .+..+..... . -....||
T Consensus 56 i~~~~r~~~-~~~g~L~si~~~-~-----~~~~l~v~l~g~~~----~~~--~~~~~~--~g~~~~~~f~~~~l~dg~WH 120 (184)
T smart00210 56 LLTTFRQTP-KSRGVLFAIYDA-Q-----NVRQFGLEVDGRAN----TLL--LRYQGV--DGKQHTVSFRNLPLADGQWH 120 (184)
T ss_pred EEEEEEeCC-CCCeEEEEEEcC-C-----CcEEEEEEEeCCcc----EEE--EEECCC--CCcEEEEeecCCccccCCce
Confidence 567777764 257776666542 1 24456666656421 233 222122 1122222111 1 2457899
Q ss_pred EEEEEeCccceEEEeecccCCC-CCCCCCceeEEeeccCCCCCCCCCccccCCCCCcEEEEEcEEEEeee
Q 020504 155 QYSILWTDSQIMEFKRTASMGG-DFPAKPMSLYATIWDGSDWATNGGKYRVNYKYAPYVTEFSDFVLHGC 223 (325)
Q Consensus 155 tYsIdWtpd~IR~~~~~~~~g~-~~P~~Pm~l~lniW~gg~WAt~GG~~~id~s~aPf~a~v~~v~v~~c 223 (325)
.-+|.+..+.|+.|+|.+.... ..+. +.. ..+=.+|..- +|....+ ..+|.-.++.++|. |
T Consensus 121 ~lal~V~~~~v~LyvDC~~~~~~~l~~-~~~--~~~~~~g~~~--~g~~~~~--~~~f~G~lq~l~i~-~ 182 (184)
T smart00210 121 KLALSVSGSSATLYVDCNEIDSRPLDR-PGQ--PPIDTDGIEV--RGAQAAD--RKPFQGDLQQLKIV-C 182 (184)
T ss_pred EEEEEEeCCEEEEEECCccccceecCC-ccc--ccccccceEE--EeeccCC--CCcceEEeEEEEEe-c
Confidence 9999999999999999864321 1221 110 0111122211 1211112 35899999999987 5
Done!