BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020508
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O34990|PURU_BACSU Formyltetrahydrofolate deformylase OS=Bacillus subtilis (strain
168) GN=purU PE=3 SV=2
Length = 300
Score = 204 bits (520), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 112/283 (39%), Positives = 171/283 (60%), Gaps = 15/283 (5%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPE-KKNVFYSRSEFIFDPIKWPREQMDEDFF 107
CPD+ GIV+ +S + G NI+ ++ + + + F+ R EF I+ + + F
Sbjct: 26 CPDQPGIVSAVSAFLFEHGANIIESNQYTTDPEGGRFFLRIEFDCAGIREKKSSLQAAFA 85
Query: 108 KLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDR 167
+++ F+ S+ ++ +VA+ SK+ HCL + ++ WQ G L EI VISNH+
Sbjct: 86 SVAEKFDMTWSLTLASELK---RVAIFVSKELHCLHELIWEWQTGNLMAEIAVVISNHEE 142
Query: 168 GPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQ--NTDFLVLARYMQILSGKFL 222
+ER IP+HY+ A ++ R E++ LEL++ + D +VLARYMQIL+ F+
Sbjct: 143 AR-----ELVERLNIPFHYMKANKDIRAEVEKKQLELLEQYDVDVIVLARYMQILTPDFV 197
Query: 223 RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVS 282
++ +INIHH LP+F G P K+A++ GVKLIGATSH+VT +LD GPIIEQ +ERV
Sbjct: 198 SAHPNRIINIHHSFLPAFIGANPYKRAYERGVKLIGATSHYVTNDLDEGPIIEQDIERVD 257
Query: 283 HRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
HRDN +E+ LA+A+K + E RV+ +E NKT+VF
Sbjct: 258 HRDNAEALKNIGRTIERSVLARAVKWHLEDRVIVHE-NKTIVF 299
>sp|Q55135|PURU_SYNY3 Formyltetrahydrofolate deformylase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=purU PE=3 SV=1
Length = 284
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/282 (39%), Positives = 171/282 (60%), Gaps = 15/282 (5%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ GIVA++++ I GNI+ AD +F +R E+ D + R ++ + +
Sbjct: 12 CPDQPGIVAQIAQFIYQNQGNIIHADQHTDFSSGLFLNRVEWQLDNFRLSRPELLSAWSQ 71
Query: 109 LSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRG 168
L++ A + D P+ +A+ SKQ+HCL+D L+ W+ G+L EI +ISNH
Sbjct: 72 LAEQLQATWQI-HFSDQLPR--LALWVSKQDHCLLDILWRWRSGELRCEIPLIISNH--- 125
Query: 169 PNSHVIRFLERHGIPYHYL-CAKENEREEELLELV----QNTDFLVLARYMQILSGKFLR 223
P+ I ++ GI +H L KEN+ +E EL D +VLA+Y+QIL+ F+
Sbjct: 126 PDLKSIA--DQFGIDFHCLPITKENKLAQETAELALLKQYQIDLVVLAKYLQILTTDFVV 183
Query: 224 SYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSH 283
+ ++INIHH LP+F G P +A + GVK+IGAT+H+ T +LD GPIIEQ V RVSH
Sbjct: 184 QF-PNIINIHHSFLPAFPGANPYHRAHERGVKIIGATAHYATAQLDEGPIIEQDVVRVSH 242
Query: 284 RDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
RDN+ ++K D+E+ LA+A++ + + R+L Y+ N+TVVF
Sbjct: 243 RDNVDDLIRKGRDLERVVLARAVRLHLQHRILVYD-NRTVVF 283
>sp|P0A5T6|PURU_MYCTU Formyltetrahydrofolate deformylase OS=Mycobacterium tuberculosis
GN=purU PE=3 SV=1
Length = 310
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 164/288 (56%), Gaps = 19/288 (6%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQIL 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQIL
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQIL 203
Query: 218 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQM 277
S FL + G +INIHH LP+F G P ++A + GVKLIGAT+H+VTE LD GPIIEQ
Sbjct: 204 SPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQD 263
Query: 278 VERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V RV H + V+ DVE+ L++A+ +C+ RV+ + N+T+VF
Sbjct: 264 VVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHH-NQTIVF 310
>sp|P0A5T7|PURU_MYCBO Formyltetrahydrofolate deformylase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=purU PE=3 SV=1
Length = 310
Score = 177 bits (448), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 109/288 (37%), Positives = 164/288 (56%), Gaps = 19/288 (6%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAAD--VFVPEKKNVFYSRSEFIFDPIKWPREQMD 103
+ C D GI+A +S +A G NI++ D PE F R+ F + +++
Sbjct: 34 LLRCHDRPGIIAAVSTFLARAGANIISLDQHSTAPEG-GTFLQRAIFHLPGLTAAVDELQ 92
Query: 104 EDFFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
DF S + + R + +VA++AS ++HCL+D L+ + G+L + + VI+
Sbjct: 93 RDFG--STVADKFGIDYRFAEAAKPKRVAIMASTEDHCLLDLLWRNRRGELEMSVVMVIA 150
Query: 164 NHDRGPN--SHVIRFLERHGIPYHYLCAKENEREE----ELLELVQNTDFLVLARYMQIL 217
NH P+ +HV F G+P+ ++ A + R E +L L N D +VLARYMQIL
Sbjct: 151 NH---PDLAAHVRPF----GVPFIHIPATRDTRTEAEQRQLQLLSGNVDLVVLARYMQIL 203
Query: 218 SGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQM 277
S FL + G +INIHH LP+F G P ++A + GVKLIGAT+H+VTE LD GPIIEQ
Sbjct: 204 SPGFLEAIGCPLINIHHSFLPAFTGAAPYQRARERGVKLIGATAHYVTEVLDEGPIIEQD 263
Query: 278 VERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V RV H + V+ DVE+ L++A+ +C+ RV+ + N+T+VF
Sbjct: 264 VVRVDHTHTVDDLVRVGADVERAVLSRAVLWHCQDRVIVHH-NQTIVF 310
>sp|Q03432|PURU_HAEIN Formyltetrahydrofolate deformylase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=purU PE=3
SV=2
Length = 278
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 107/286 (37%), Positives = 155/286 (54%), Gaps = 27/286 (9%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEF--IFDPIKWPREQMDEDF 106
CPD+ G++AK++ NIL + FV + F+ R+E IF+ + ED
Sbjct: 11 CPDDKGLIAKITNICYKHQLNILHNNEFVDFETKHFFMRTELEGIFN-----EATLLEDL 65
Query: 107 -FKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165
+ L + N R+ K ++ +L +K+ HCL D L G L VEI VI NH
Sbjct: 66 KYSLPEETNC-----RLIGTQRK-RIVILVTKEAHCLGDILMKNYYGALDVEIAAVIGNH 119
Query: 166 DRGPNSHVIRFLERHGIPYHYLCAKEN----EREEELLELVQ--NTDFLVLARYMQILSG 219
D ++ +ER IP+H L + EN E ++ L E + D++VLA+YM++L+
Sbjct: 120 D-----NLRELVERFNIPFH-LVSHENLTRVEHDKLLAEKIDEYTPDYIVLAKYMRVLNP 173
Query: 220 KFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVE 279
+F+ Y VINIHH LP+F G KP +QA+ GVK+IGAT+HF+ ELD GPII Q V
Sbjct: 174 EFVARYPNRVINIHHSFLPAFIGAKPYQQAYKRGVKIIGATAHFINNELDQGPIIMQNVI 233
Query: 280 RVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V H N ++ DVEK L++A+ R+ Y+ NKTVV
Sbjct: 234 NVDHTYNAEAMMRAGRDVEKTVLSRALDLALHDRIFVYK-NKTVVL 278
>sp|Q46339|PURU_CORS1 Formyltetrahydrofolate deformylase OS=Corynebacterium sp. (strain
P-1) GN=purU PE=3 SV=1
Length = 286
Score = 159 bits (401), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 100/285 (35%), Positives = 149/285 (52%), Gaps = 14/285 (4%)
Query: 46 VFHCPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDED 105
CP+ +GIV ++ + I+ + + R +F D + + +
Sbjct: 10 TLQCPEGIGIVHAVTGFLVRHQRTIVELKQYDDMSAGRLFLRVDFAGDSAPDLLDALRSE 69
Query: 106 FFKLSKMFNAMRSVVRVPDIDPKYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNH 165
F +++ F+ M +R + K KV ++ SK EHCL D L+ G LP+E+ V SNH
Sbjct: 70 FSEVAAKFD-MDWQLR--ERGQKTKVLIMVSKFEHCLQDLLFRMHSGDLPIEVVGVASNH 126
Query: 166 DRGPNSHVIRFLERHGIPYHYLCAKENER---EEELLELVQNT--DFLVLARYMQILSGK 220
P+ + +E +GI +H++ ++ + E LLEL+ T + +VLARYMQ+LS
Sbjct: 127 ---PDHRSL--VEWYGIGFHHIPISKDTKPRAEAALLELIDQTGAELVVLARYMQVLSDH 181
Query: 221 FLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVER 280
INIHH LPSFKG KP QA++ GVK +GAT+H+V ELD GPII Q V
Sbjct: 182 LASELTGKTINIHHSFLPSFKGAKPYHQAWERGVKTVGATAHYVNSELDEGPIIAQQVVE 241
Query: 281 VSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V H + V D E + L+ A++ +CE RV Y N+TVV
Sbjct: 242 VDHTYGPQDLVAAGRDSECKALSNAVRWHCEGRVFLYG-NRTVVL 285
>sp|P0A441|PURU_SHIFL Formyltetrahydrofolate deformylase OS=Shigella flexneri GN=purU
PE=3 SV=1
Length = 280
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 29/287 (10%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQILS 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM++L+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLT 174
Query: 219 GKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMV 278
+F+ + +INIHH LP+F G +P QA++ GVK+IGAT+H+V + LD GPII Q V
Sbjct: 175 PEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDV 234
Query: 279 ERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V H ++ DVEK L++A+ RV Y N+T++
Sbjct: 235 IHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P0A440|PURU_ECOL6 Formyltetrahydrofolate deformylase OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=purU PE=3 SV=1
Length = 280
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 29/287 (10%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQILS 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM++L+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLSRNEHDQKMADAIDAYQPDYVVLAKYMRVLT 174
Query: 219 GKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMV 278
+F+ + +INIHH LP+F G +P QA++ GVK+IGAT+H+V + LD GPII Q V
Sbjct: 175 PEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDV 234
Query: 279 ERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V H ++ DVEK L++A+ RV Y N+T++
Sbjct: 235 IHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P37051|PURU_ECOLI Formyltetrahydrofolate deformylase OS=Escherichia coli (strain K12)
GN=purU PE=1 SV=1
Length = 280
Score = 155 bits (392), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 29/287 (10%)
Query: 49 CPDEVGIVAKLSECIASRGGNILAADVFVPEKKNVFYSRSEFIFDPIKWPREQMDEDFFK 108
CPD+ G++A+++ NI+ + FV + F+ R+E E F
Sbjct: 13 CPDQKGLIARITNICYKHELNIVQNNEFVDHRTGRFFMRTEL-------------EGIFN 59
Query: 109 LSKMFNAMRSVV---RVPDIDP--KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVIS 163
S + + S + V +++P + ++ +L +K+ HCL D L G L VEI VI
Sbjct: 60 DSTLLADLDSALPEGSVRELNPAGRRRIVILVTKEAHCLGDLLMKANYGGLDVEIAAVIG 119
Query: 164 NHDRGPNSHVIRFLERHGIPYHYLCAK---ENEREEELLELVQ--NTDFLVLARYMQILS 218
NHD + +ER IP+ + + NE ++++ + + D++VLA+YM++L+
Sbjct: 120 NHDT-----LRSLVERFDIPFELVSHEGLTRNEHDQKMADAIDAYQPDYVVLAKYMRVLT 174
Query: 219 GKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMV 278
+F+ + +INIHH LP+F G +P QA++ GVK+IGAT+H+V + LD GPII Q V
Sbjct: 175 PEFVARFPNKIINIHHSFLPAFIGARPYHQAYERGVKIIGATAHYVNDNLDEGPIIMQDV 234
Query: 279 ERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRVLPYEMNKTVVF 325
V H ++ DVEK L++A+ RV Y N+T++
Sbjct: 235 IHVDHTYTAEDMMRAGRDVEKNVLSRALYKVLAQRVFVYG-NRTIIL 280
>sp|P21872|PUR2_CHICK Trifunctional purine biosynthetic protein adenosine-3 OS=Gallus
gallus GN=GART PE=2 SV=1
Length = 1003
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 91/186 (48%), Gaps = 9/186 (4%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K KVAVL S L + ++ EI V+SN +R ER GIP +
Sbjct: 803 KVKVAVLISGTGTNLEALINSTKKPTSFAEIVLVVSNK---AGVEGLRKAERAGIPTRVI 859
Query: 188 CAKENEREEELLELVQ------NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFK 241
K+ E V + + + LA +M+ILSG F++ + ++NIH LLPSFK
Sbjct: 860 DHKQYGSRTEFDSAVDRVLEEFSVELICLAGFMRILSGPFVKKWEGKILNIHPSLLPSFK 919
Query: 242 GGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQC 301
G K +AGV++ G T HFV EE+DAG II Q V D + T ++ ++ E +
Sbjct: 920 GANAHKLVLEAGVRVTGCTVHFVAEEVDAGAIIFQEAVPVKIGDTVETLSERVKEAEHRA 979
Query: 302 LAKAIK 307
A++
Sbjct: 980 FPAALQ 985
>sp|Q59A32|PUR2_BOVIN Trifunctional purine biosynthetic protein adenosine-3 OS=Bos taurus
GN=GART PE=2 SV=1
Length = 1010
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 91/188 (48%), Gaps = 13/188 (6%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIP---- 183
K +VAVL S L + +E I VISN + E+ GIP
Sbjct: 807 KARVAVLISGTGSNLQALIDSTREPSSLAHIVIVISNKAAVAG---LDKAEKAGIPTRVI 863
Query: 184 ----YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPS 239
Y A + +E L E +TD + LA +M+ILSG F+R + ++NIH LLPS
Sbjct: 864 NHKLYKNRAAFDTAIDEVLEEF--STDIVCLAGFMRILSGPFVRKWNGKMLNIHPSLLPS 921
Query: 240 FKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK 299
FKG +Q DAGV + G T HFV E++DAG II Q V D + T ++ + E
Sbjct: 922 FKGSNAHEQVLDAGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVETLSERVKLAEH 981
Query: 300 QCLAKAIK 307
+ A++
Sbjct: 982 KIFPSALQ 989
>sp|Q64737|PUR2_MOUSE Trifunctional purine biosynthetic protein adenosine-3 OS=Mus
musculus GN=Gart PE=2 SV=3
Length = 1010
Score = 87.8 bits (216), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 92/186 (49%), Gaps = 9/186 (4%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K +VAVL S L + ++ K I VISN + + + R ER GIP +
Sbjct: 807 KARVAVLISGTGSNLQALIDSTRDPKSSSHIVLVISN--KAAVAGLDR-AERAGIPTRVI 863
Query: 188 CAKENEREEELLELVQ------NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFK 241
K + E V + D + LA +M+ILSG F+R + ++NIH LLPSFK
Sbjct: 864 NHKLYKNRVEFDNAVDHVLEEFSVDIVCLAGFMRILSGPFVRKWDGKMLNIHPSLLPSFK 923
Query: 242 GGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQC 301
G +Q +AGV + G T HFV E++DAG II Q V D + T ++ + E +
Sbjct: 924 GSNAHEQVLEAGVTITGCTVHFVAEDVDAGQIILQEAVPVRRGDTVATLSERVKVAEHKI 983
Query: 302 LAKAIK 307
A++
Sbjct: 984 FPAALQ 989
>sp|P22102|PUR2_HUMAN Trifunctional purine biosynthetic protein adenosine-3 OS=Homo
sapiens GN=GART PE=1 SV=1
Length = 1010
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
K +VAVL S L + +E +I VISN + ER GIP +
Sbjct: 807 KARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAG---LDKAERAGIPTRVI 863
Query: 188 CAK--ENERE-EELLELVQ---NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFK 241
K +N E + ++LV + D + LA +M+ILSG F++ + ++NIH LLPSFK
Sbjct: 864 NHKLYKNRVEFDSAIDLVLEEFSIDIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFK 923
Query: 242 GGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQC 301
G +QA + GV + G T HFV E++DAG II Q V D + T ++ + E +
Sbjct: 924 GSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGDTVATLSERVKLAEHKI 983
Query: 302 LAKAIK 307
A++
Sbjct: 984 FPAALQ 989
>sp|P12040|PUR3_BACSU Phosphoribosylglycinamide formyltransferase OS=Bacillus subtilis
(strain 168) GN=purN PE=3 SV=2
Length = 195
Score = 85.5 bits (210), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 74/150 (49%), Gaps = 6/150 (4%)
Query: 169 PNSHVIRFLERHGIPYHYLCAKENER----EEELLELVQ--NTDFLVLARYMQILSGKFL 222
P + VI E IP K E E+ ++E ++ + + LA YM+++ L
Sbjct: 39 PQAKVIERAEAFHIPSFAFEPKSYENKAAFEQAIIEQLRLHEVELIALAGYMRLIGDTLL 98
Query: 223 RSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVS 282
++YG +INIH LLP+F G QAF AGVK+ G T H+V E +D GPII Q +
Sbjct: 99 QAYGGKIINIHPSLLPAFPGIDAVGQAFRAGVKVAGITVHYVDEGMDTGPIIAQKAIEID 158
Query: 283 HRDNLRTFVQKSEDVEKQCLAKAIKSYCEL 312
D L T Q+ +E + IK L
Sbjct: 159 EHDTLETIEQRIHKLEHKWYPSVIKQLLGL 188
>sp|P43846|PUR3_HAEIN Phosphoribosylglycinamide formyltransferase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=purN PE=3 SV=1
Length = 212
Score = 85.1 bits (209), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 92/191 (48%), Gaps = 9/191 (4%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYLCA 189
K+AVL S Q L + G +P +I CVISN +++ + ++ IP
Sbjct: 3 KIAVLISGQGTNLQTIIDACHSGDIPAKIACVISNK---ADAYGLVRAKQAQIPQAVFLR 59
Query: 190 KENEREEELLELVQN------TDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKGG 243
K E+ + + + D +VLA YM+IL+ KF + + ++NIH LLP + G
Sbjct: 60 KNFSNNLEMDDAIGDYLQSLAVDLIVLAGYMKILTPKFTQRFAGKILNIHPSLLPKYAGL 119
Query: 244 KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLA 303
++A +AG G T HFV EE+D G I+ Q + D++ ++ + E Q
Sbjct: 120 NTYQRAIEAGDNEHGTTVHFVNEEVDGGAIVLQAKVPIFPEDSIEEVEARTREQEYQIYP 179
Query: 304 KAIKSYCELRV 314
IK + E R+
Sbjct: 180 LVIKWFTEGRL 190
>sp|Q5HH12|PUR3_STAAC Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain COL) GN=purN PE=3 SV=1
Length = 188
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFDSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQ 153
>sp|P00967|PUR2_DROME Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
melanogaster GN=ade3 PE=1 SV=2
Length = 1353
Score = 72.4 bits (176), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 128 KYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY 184
+ +VAVL S L+D +G + ++ VISN P ++ + GIP
Sbjct: 1153 RKRVAVLISGTGSNLQALIDATRDSAQG-IHADVVLVISNK---PGVLGLQRATQAGIPS 1208
Query: 185 HYLCAKE-NEREEELLELVQN-----TDFLVLARYMQILSGKFLRSYGKDVINIHHGLLP 238
+ K+ RE EL +N D + LA +M++LS F+R + ++NIH LLP
Sbjct: 1209 LVISHKDFASREVYDAELTRNLKAARVDLICLAGFMRVLSAPFVREWRGRLVNIHPSLLP 1268
Query: 239 SFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVE 298
+ G KQA +AG K G T HFV E +D G II Q + D+ + Q+ E
Sbjct: 1269 KYPGLHVQKQALEAGEKESGCTVHFVDEGVDTGAIIVQAAVPILPDDDEDSLTQRIHKAE 1328
Query: 299 KQCLAKAI 306
+A+
Sbjct: 1329 HWAFPRAL 1336
>sp|P16340|PUR2_DROPS Trifunctional purine biosynthetic protein adenosine-3 OS=Drosophila
pseudoobscura pseudoobscura GN=ade3 PE=3 SV=2
Length = 1364
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 127 PKYKVAVLASKQE---HCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERH--- 180
P+ +VAVL S + L+D + +G + EI VISN + LER
Sbjct: 1154 PRKRVAVLISGKGSNLQALIDAIRDSAQG-VYAEIVLVISNKAG------VLGLERAAKA 1206
Query: 181 GIPYHYLCAKE-NEREEELLELVQN-----TDFLVLARYMQILSGKFLRSYGKDVINIHH 234
GIP + K+ RE +EL ++ +F+ LA +M+ILS F+R + +INIH
Sbjct: 1207 GIPSMVISHKDFPSREVYDVELTRHLKTARVEFICLAGFMRILSVPFVREWRGRLINIHP 1266
Query: 235 GLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQK 293
LLP F G KQA +AG G T H+V E +D G II Q + D+ T Q+
Sbjct: 1267 SLLPKFPGLHVQKQALEAGETESGCTVHYVDEGVDTGAIIVQAAVPILPGDDEETLTQR 1325
>sp|Q6GI12|PUR3_STAAR Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MRSA252) GN=purN PE=3 SV=1
Length = 188
Score = 71.6 bits (174), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKE----NEREEELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFGSKAAYEQHLVTLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDSGMDTGEIIEQ 153
>sp|Q8NX89|PUR3_STAAW Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MW2) GN=purN PE=3 SV=1
Length = 188
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFDSKAAYEQHLVSLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQ 153
>sp|Q6GAE1|PUR3_STAAS Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain MSSA476) GN=purN PE=3 SV=1
Length = 188
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFDSKAAYEQHLVSLLNEDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQ 153
>sp|P99162|PUR3_STAAN Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain N315) GN=purN PE=1 SV=1
Length = 188
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQN--TDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQ 153
>sp|P65897|PUR3_STAAM Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
aureus (strain Mu50 / ATCC 700699) GN=purN PE=1 SV=1
Length = 188
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
K+A+ AS + + + GKL +E+T + ++H N+ I ++H IP +
Sbjct: 3 KIAIFASGSGSNFENIVEHVESGKLENIEVTALYTDHQ---NAFCIDRAKKHDIPVYINE 59
Query: 189 AKENER----EEELLELVQN--TDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ L+ L+ ++++LA YM+++ L S+ ++NIH LLP +KG
Sbjct: 60 PKQFDSKAAYEQHLVTLLNKDKVEWIILAGYMRLIGPDLLASFEGKILNIHPSLLPKYKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA+ +G + G+T H+V +D G IIEQ
Sbjct: 120 IDAIGQAYHSGDTITGSTVHYVDCGMDTGEIIEQ 153
>sp|O67890|FMT_AQUAE Methionyl-tRNA formyltransferase OS=Aquifex aeolicus (strain VF5)
GN=fmt PE=3 SV=1
Length = 303
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 72/145 (49%), Gaps = 7/145 (4%)
Query: 178 ERHGIPYHYLCAKENEREEELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHG 235
++ GIP + + E+++EL+ LV+ D +V+ Y +IL + L IN+H
Sbjct: 53 QKLGIPIY-----QPEKKKELIPLVEELKPDCIVVVAYGKILPKEVLDLPPYKTINLHAS 107
Query: 236 LLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSE 295
LLP ++G P ++A AG K G T V EE+DAG I+ Q + DN T +K
Sbjct: 108 LLPKYRGAAPIQRAIMAGEKETGNTVMLVNEEMDAGDILAQEKIPIEEEDNFLTLSEKLA 167
Query: 296 DVEKQCLAKAIKSYCELRVLPYEMN 320
+ L ++ + E +V P N
Sbjct: 168 KSGAKLLVNTLRLWFEGKVKPVPQN 192
>sp|Q5HPX5|FMT_STAEQ Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=fmt PE=3 SV=1
Length = 310
Score = 68.6 bits (166), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 10/163 (6%)
Query: 157 EITCVISNHDRGPNSH-------VIRFLERHGIP-YHYLCAKENEREEELLELVQNTDFL 208
E+ V++ DR V R +H IP Y K+++ + LL L +D +
Sbjct: 25 EVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQIPVYQPEKLKDSQELDVLLSL--ESDLI 82
Query: 209 VLARYMQILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEEL 268
V A + Q+L L + IN+H LLP ++GG P QA G + G T ++ ++L
Sbjct: 83 VTAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETGITIMYMVKKL 142
Query: 269 DAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 311
DAG II Q R+ DN+ T K + + L K + S +
Sbjct: 143 DAGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|P08179|PUR3_ECOLI Phosphoribosylglycinamide formyltransferase OS=Escherichia coli
(strain K12) GN=purN PE=1 SV=1
Length = 212
Score = 68.2 bits (165), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 181 GIPYHYLCAKE-NEREEELLELVQNTDF-----LVLARYMQILSGKFLRSYGKDVINIHH 234
GI H L A + RE EL+ D +VLA +M+ILS F+ Y ++NIH
Sbjct: 50 GIATHTLIASAFDSREAYDRELIHEIDMYAPDVVVLAGFMRILSPAFVSHYAGRLLNIHP 109
Query: 235 GLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
LLP + G +QA + G + G + HFVT+ELD GP+I Q
Sbjct: 110 SLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQ 151
>sp|P52423|PUR3_VIGUN Phosphoribosylglycinamide formyltransferase, chloroplastic OS=Vigna
unguiculata GN=PUR3 PE=2 SV=2
Length = 312
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 14/199 (7%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPY-HY 186
+ K+AV S ++G L ++T +++N + R +GIP +
Sbjct: 98 RKKLAVFVSGGGSNFRSIHEASKKGSLHGDVTVLVTNKSECGGAQYAR---NNGIPVILF 154
Query: 187 LCAKENEREEELLELVQN-----TDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFK 241
AK+ + +LV DF++LA Y++++ + +R++ + + NIH LLP+F
Sbjct: 155 PKAKDEPKGLSPCDLVDTLRKFEVDFVLLAGYLKLIPVELIRAFERSIFNIHPSLLPAFG 214
Query: 242 GG-----KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
G K K +G + G T HFV E D G I+ Q V V D + +
Sbjct: 215 GKGYYGMKVHKAVIASGARFSGPTIHFVDEHYDTGRILAQRVVPVLANDTAEELAARVLN 274
Query: 297 VEKQCLAKAIKSYCELRVL 315
E Q + +++ CE R++
Sbjct: 275 EEHQLYVEVVEALCEERIV 293
>sp|P52422|PUR3_ARATH Phosphoribosylglycinamide formyltransferase, chloroplastic
OS=Arabidopsis thaliana GN=PUR3 PE=2 SV=2
Length = 292
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 92/199 (46%), Gaps = 15/199 (7%)
Query: 128 KYKVAVLASKQEHCLVDFLYGWQEGKLPVEITCVISNHDRGPNSHVIRFLERHGIPYHYL 187
+ K+AV S G +G + ++ +++N + R +GIP
Sbjct: 77 RKKLAVFVSGGGSNFRKIHEGCSDGSVNGDVVLLVTNKKDCGGAEYAR---SNGIPVLVF 133
Query: 188 CAKENEREE-----ELLELVQ--NTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSF 240
+ E + EL+++++ DF++LA Y++++ + ++++ K ++NIH LLP+F
Sbjct: 134 PKAKREPSDGLSPSELVDVLRKYGVDFVLLAGYLKLIPVELVQAFPKRILNIHPALLPAF 193
Query: 241 KGG-----KPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSE 295
G K K ++G + G T HFV EE D G I+ Q RV D ++
Sbjct: 194 GGKGLYGIKVHKAVLESGARYSGPTIHFVNEEYDTGRILAQSAVRVIANDTPEELAKRVL 253
Query: 296 DVEKQCLAKAIKSYCELRV 314
E + + + + CE R+
Sbjct: 254 HEEHKLYVEVVGAICEERI 272
>sp|Q819U1|FMT_BACCR Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain ATCC
14579 / DSM 31) GN=fmt PE=3 SV=1
Length = 314
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLKIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|B7HDY9|FMT_BACC4 Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain B4264)
GN=fmt PE=3 SV=1
Length = 314
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLKIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|B7IUM5|FMT_BACC2 Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain G9842)
GN=fmt PE=3 SV=1
Length = 314
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLKIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|B9IVF5|FMT_BACCQ Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain Q1)
GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|B7HLJ9|FMT_BACC7 Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain AH187)
GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|Q636G0|FMT_BACCZ Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain ZK /
E33L) GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|C1EP90|FMT_BACC3 Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain
03BB102) GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|B7JJV3|FMT_BACC0 Methionyl-tRNA formyltransferase OS=Bacillus cereus (strain AH820)
GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|Q81WH2|FMT_BACAN Methionyl-tRNA formyltransferase OS=Bacillus anthracis GN=fmt PE=1
SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|A0RHN9|FMT_BACAH Methionyl-tRNA formyltransferase OS=Bacillus thuringiensis (strain
Al Hakam) GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|C3L761|FMT_BACAC Methionyl-tRNA formyltransferase OS=Bacillus anthracis (strain CDC
684 / NRRL 3495) GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|C3P637|FMT_BACAA Methionyl-tRNA formyltransferase OS=Bacillus anthracis (strain
A0248) GN=fmt PE=3 SV=1
Length = 314
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLRIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + N+
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQNE 196
>sp|Q8CT28|PUR3_STAES Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=purN PE=3 SV=1
Length = 188
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
+A+ AS + + Q G+L + +T + ++++ P I + IP H
Sbjct: 3 NIAIFASGSGSNFENIVKHIQTGQLSGINVTALYTDNEGVP---CIDRAKNLNIPIHINK 59
Query: 189 AKE----NEREEELLELVQNTD--FLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ LL+L+ + + ++VLA YM+++ L++Y ++NIH LLP FKG
Sbjct: 60 PKDFSSKSLYEQHLLKLLSSEEVQWIVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA ++G + G+T H+V +D G IIEQ
Sbjct: 120 LDAIGQALESGDTVTGSTVHYVDSGMDTGEIIEQ 153
>sp|Q5HQ98|PUR3_STAEQ Phosphoribosylglycinamide formyltransferase OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=purN PE=3
SV=1
Length = 188
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 10/154 (6%)
Query: 130 KVAVLASKQEHCLVDFLYGWQEGKLP-VEITCVISNHDRGPNSHVIRFLERHGIPYHYLC 188
+A+ AS + + Q G+L + +T + ++++ P I + IP H
Sbjct: 3 NIAIFASGSGSNFENIVKHIQTGQLSGINVTALYTDNEGVP---CIDRAKNLNIPIHINK 59
Query: 189 AKE----NEREEELLELVQNTD--FLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKG 242
K+ + E+ LL+L+ + + ++VLA YM+++ L++Y ++NIH LLP FKG
Sbjct: 60 PKDFSSKSLYEQHLLKLLSSEEVQWIVLAGYMRLVGQDLLQAYEGRILNIHPSLLPKFKG 119
Query: 243 GKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQ 276
QA ++G + G+T H+V +D G IIEQ
Sbjct: 120 LDAIGQALESGDTVTGSTVHYVDSGMDTGEIIEQ 153
>sp|Q92AI5|FMT_LISIN Methionyl-tRNA formyltransferase OS=Listeria innocua serovar 6a
(strain CLIP 11262) GN=fmt PE=3 SV=1
Length = 312
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 61/135 (45%), Gaps = 3/135 (2%)
Query: 181 GIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPS 239
GIP Y + + EEL+ L D LV A Y QIL L S IN+H LLP
Sbjct: 56 GIPVYQPEKLRTSSELEELISL--EADLLVTAAYGQILPNTLLESPKHGAINVHASLLPE 113
Query: 240 FKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEK 299
++GG P A G G T ++ E+LDAG +I Q ++ DN T K +
Sbjct: 114 YRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITEEDNTGTMFDKLSKLGA 173
Query: 300 QCLAKAIKSYCELRV 314
+ L + + ++
Sbjct: 174 ELLMDTLPDFLAGKI 188
>sp|Q9K9Y6|FMT_BACHD Methionyl-tRNA formyltransferase OS=Bacillus halodurans (strain
ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
GN=fmt PE=3 SV=1
Length = 317
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Query: 178 ERHGIPYHYLCAKENEREEELLELVQN--TDFLVLARYMQILSGKFLRSYGKDVINIHHG 235
E+H IP + E R+E LE + + D +V A + QIL L IN+H
Sbjct: 53 EKHQIP---VLQPEKIRDEAELERLFSFEPDLIVTAAFGQILPNALLEYPKHGCINVHAS 109
Query: 236 LLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSE 295
LLP ++GG P QA G K G T ++ E+LDAG I+ Q+ ++ D++ + K
Sbjct: 110 LLPKYRGGAPIHQAIIDGEKETGITIMYMAEKLDAGDILTQVTVPIADDDHVGSLHNKLS 169
Query: 296 DVEKQCLAKAIKSYC--ELRVLPYE 318
+ LAK I EL+ +P +
Sbjct: 170 EAGAALLAKTIPPLIKGELQSIPQD 194
>sp|A7Z4J3|FMT_BACA2 Methionyl-tRNA formyltransferase OS=Bacillus amyloliquefaciens
(strain FZB42) GN=fmt PE=3 SV=1
Length = 317
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 5/147 (3%)
Query: 178 ERHGIPYHYLCAKENEREEELLE--LVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHG 235
ERHGIP + E R EE +E L D +V A + QIL + L IN+H
Sbjct: 54 ERHGIP---VLQPEKVRLEEEIEKVLSLKPDLIVTAAFGQILPKQLLDGPKYGCINVHAS 110
Query: 236 LLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSE 295
LLP +GG P + G K G T ++ E+LDAG +I ++ + DN+ T K
Sbjct: 111 LLPELRGGAPIHYSILQGKKKTGVTIMYMVEKLDAGDMISKIEVEIDETDNVGTLHDKLS 170
Query: 296 DVEKQCLAKAIKSYCELRVLPYEMNKT 322
+ L++ + + + P + +++
Sbjct: 171 IAGAKLLSETVPNVISGNIKPIKQDES 197
>sp|A9VTA4|FMT_BACWK Methionyl-tRNA formyltransferase OS=Bacillus weihenstephanensis
(strain KBAB4) GN=fmt PE=3 SV=1
Length = 314
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 3/148 (2%)
Query: 178 ERHGIPY-HYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVVQPLKIREKDEYEKVLAL--EPDLIVTAAFGQIVPNEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMEGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNKTVV 324
L+K + + ++ P + ++ V
Sbjct: 172 AGAHLLSKTVPLLIQGKLEPIKQSEAEV 199
>sp|Q5WFK7|FMT_BACSK Methionyl-tRNA formyltransferase OS=Bacillus clausii (strain
KSM-K16) GN=fmt PE=3 SV=1
Length = 312
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 178 ERHGIPYHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGLL 237
++HGIP K E+ E++L + +V A Y QI+ L + IN+H LL
Sbjct: 52 QKHGIPV-LQPEKIREQHEDILAFA--PELIVTAAYGQIVPKAVLDAPPYGCINVHASLL 108
Query: 238 PSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDV 297
P ++GG P QA G K G + ++ E+LDAG ++ Q ++ D+++T K V
Sbjct: 109 PKYRGGAPIHQAIIDGEKQTGISIMYMAEKLDAGAVLSQQAVAITDEDDVQTMHDKLSAV 168
Query: 298 EKQCLAKAI 306
L K I
Sbjct: 169 GADLLEKTI 177
>sp|A7GRJ6|FMT_BACCN Methionyl-tRNA formyltransferase OS=Bacillus cereus subsp.
cytotoxis (strain NVH 391-98) GN=fmt PE=3 SV=1
Length = 314
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 3/145 (2%)
Query: 178 ERHGIP-YHYLCAKENEREEELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGL 236
E+HGIP L +E + E++L L D +V A + QI+ + L + IN+H L
Sbjct: 54 EKHGIPVLQPLKIREQDEYEKVLAL--EPDLIVTAAFGQIIPKEILEAPKYGCINVHASL 111
Query: 237 LPSFKGGKPAKQAFDAGVKLIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSED 296
LP +GG P A G + G T ++ E+LDAG I+ Q+ + R+ + K +
Sbjct: 112 LPELRGGAPIHYAIMQGKEKTGITIMYMVEKLDAGDILTQVEVEIEERETTGSLFDKLSE 171
Query: 297 VEKQCLAKAIKSYCELRVLPYEMNK 321
L+K + + ++ P + ++
Sbjct: 172 AGAHLLSKTVPLLVQGKLEPIKQDE 196
>sp|Q8CSW1|FMT_STAES Methionyl-tRNA formyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=fmt PE=3 SV=1
Length = 310
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 8/162 (4%)
Query: 157 EITCVISNHDRGPNSH-------VIRFLERHGIPYHYLCAKENEREEELLELVQNTDFLV 209
E+ V++ DR V R +H IP Y K + +E L +D +V
Sbjct: 25 EVIAVVTQPDRPVGRKKVMTPPPVKRVATKHQIPV-YQPEKLKDSQELESLLSLESDLIV 83
Query: 210 LARYMQILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVKLIGATSHFVTEELD 269
A + Q+L L + IN+H LLP ++GG P QA G + G T ++ ++LD
Sbjct: 84 TAAFGQLLPESLLNAPKLGAINVHASLLPKYRGGAPIHQAIIDGEEETGITIMYMVKKLD 143
Query: 270 AGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCE 311
AG II Q R+ DN+ T K + + L K + S +
Sbjct: 144 AGNIISQQSIRIEEEDNVGTMHDKLSFLGAELLKKTLPSIID 185
>sp|Q71YJ3|FMT_LISMF Methionyl-tRNA formyltransferase OS=Listeria monocytogenes serotype
4b (strain F2365) GN=fmt PE=3 SV=1
Length = 312
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Query: 196 EELLELVQNTDFLVLARYMQILSGKFLRSYGKDVINIHHGLLPSFKGGKPAKQAFDAGVK 255
EEL+ L D LV A Y QIL L S IN+H LLP ++GG P A G
Sbjct: 72 EELIAL--EADLLVTAAYGQILPNSLLESPKHGAINVHASLLPEYRGGAPVHYALLDGKT 129
Query: 256 LIGATSHFVTEELDAGPIIEQMVERVSHRDNLRTFVQKSEDVEKQCLAKAIKSYCELRV 314
G T ++ E+LDAG +I Q ++ DN T K + + L + + ++
Sbjct: 130 ETGVTIMYMVEKLDAGDMISQRKIPITDEDNTGTMFDKLSKLGAELLMDTLPDFLAGKI 188
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,092,467
Number of Sequences: 539616
Number of extensions: 5190600
Number of successful extensions: 13734
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 749
Number of HSP's successfully gapped in prelim test: 46
Number of HSP's that attempted gapping in prelim test: 12945
Number of HSP's gapped (non-prelim): 804
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)