BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>020509
MKVQRLPNSKTKMAFAAIIMKKAFHSASGQLSNSPQGICNVRMSGEELLSRLLDRKWALT
SPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPL
VNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQPQI
LTGYNLISTIYGKVTYVPRTHYAHRIEMLKSYANLVAGNNGDVVWCNEIFEASLTAQKSR
ASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLIPGSFTWKKKGYKICCGCWYWDNS
CWFRSWSHMFRASMGGNCNSIGGYN

High Scoring Gene Products

Symbol, full name Information P value
AT3G26115 protein from Arabidopsis thaliana 2.4e-67

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  020509
        (325 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2090345 - symbol:AT3G26115 species:3702 "Arabi...   684  2.4e-67   1


>TAIR|locus:2090345 [details] [associations]
            symbol:AT3G26115 species:3702 "Arabidopsis thaliana"
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0030170 "pyridoxal phosphate binding"
            evidence=IEA] InterPro:IPR001926 Pfam:PF00291 EMBL:CP002686
            SUPFAM:SSF53686 EMBL:AK228771 IPI:IPI00530652 RefSeq:NP_974363.1
            UniGene:At.37273 ProteinModelPortal:Q0WQC8
            EnsemblPlants:AT3G26115.2 GeneID:822210 KEGG:ath:AT3G26115
            TAIR:At3g26115 OMA:YTLAAWE Genevestigator:Q3EB01 Uniprot:Q0WQC8
        Length = 433

 Score = 684 (245.8 bits), Expect = 2.4e-67, P = 2.4e-67
 Identities = 139/232 (59%), Positives = 168/232 (72%)

Query:    43 MSGEELLSRLLDRKWALTSPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIM 102
             +   E +S+LLDRKW L  P S I QI + +     G   +   SFLNNT P LGD+M  
Sbjct:    33 IDSREFVSKLLDRKWGLQCPASPIQQISVSSVK---G---IDKFSFLNNTRPHLGDEMSK 86

Query:   103 RDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSC 162
               +   FY++RDDLLHPLVNGNKARK+DALLPL+EDH VTDLVTCGGCQSAH  AVAVSC
Sbjct:    87 SKQGSSFYILRDDLLHPLVNGNKARKLDALLPLVEDHKVTDLVTCGGCQSAHTAAVAVSC 146

Query:   163 AERGLKSHLLLRGEQPQILTGYNLISTIYGKVTYVPRTHYAHRIEMLKSYANLVAGNNGD 222
             AERGL+SHLLLRGEQP +LTGYNL+ST+YG V YVPR+ YA+R EML++YA+LVAG +G 
Sbjct:   147 AERGLRSHLLLRGEQPDVLTGYNLVSTMYGNVQYVPRSRYANREEMLRTYADLVAGEDGT 206

Query:   223 VVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALL 274
             V+W  +I E   T        + +MD    +   R+KVLIVNEGAGDA+ALL
Sbjct:   207 VLWAKDIVEGRDTMN------VAKMDDFSSMKTSRRKVLIVNEGAGDALALL 252


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.321   0.136   0.438    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      325       310   0.00079  116 3  11 22  0.37    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  619 (66 KB)
  Total size of DFA:  251 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.77u 0.11s 22.88t   Elapsed:  00:00:01
  Total cpu time:  22.77u 0.11s 22.88t   Elapsed:  00:00:01
  Start:  Tue May 21 04:12:17 2013   End:  Tue May 21 04:12:18 2013

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