Query 020509
Match_columns 325
No_of_seqs 253 out of 1337
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 04:02:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020509.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020509hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1f2d_A 1-aminocyclopropane-1-c 99.9 7.6E-26 2.6E-30 213.2 14.0 113 90-202 13-137 (341)
2 4d9b_A D-cysteine desulfhydras 99.9 7.4E-26 2.5E-30 214.3 12.5 111 91-201 31-147 (342)
3 1j0a_A 1-aminocyclopropane-1-c 99.9 2.6E-25 8.8E-30 208.3 14.9 110 91-202 20-130 (325)
4 1tzj_A ACC deaminase, 1-aminoc 99.9 3.3E-24 1.1E-28 200.8 11.7 113 90-202 13-134 (338)
5 2o2e_A Tryptophan synthase bet 99.9 4.2E-21 1.4E-25 187.8 14.3 176 79-277 77-271 (422)
6 1qop_B Tryptophan synthase bet 99.8 1.1E-19 3.8E-24 174.8 14.0 175 79-277 51-243 (396)
7 4aec_A Cysteine synthase, mito 99.8 3E-19 1E-23 176.5 16.2 110 84-200 115-230 (430)
8 1wkv_A Cysteine synthase; homo 99.8 1.7E-19 5.7E-24 175.5 14.0 166 91-278 95-274 (389)
9 1x1q_A Tryptophan synthase bet 99.8 1.3E-19 4.4E-24 176.5 11.5 171 92-277 77-266 (418)
10 4h27_A L-serine dehydratase/L- 99.8 2E-19 7E-24 172.2 11.5 101 92-199 46-147 (364)
11 3tbh_A O-acetyl serine sulfhyd 99.8 5.1E-18 1.8E-22 160.6 16.9 120 60-200 2-127 (334)
12 2egu_A Cysteine synthase; O-ac 99.8 1.9E-18 6.4E-23 160.4 13.0 103 91-200 13-120 (308)
13 2rkb_A Serine dehydratase-like 99.8 7.8E-19 2.7E-23 163.7 10.1 103 91-200 6-109 (318)
14 2q3b_A Cysteine synthase A; py 99.8 5.4E-18 1.8E-22 157.7 15.0 166 91-278 15-194 (313)
15 2d1f_A Threonine synthase; ami 99.8 2.5E-18 8.7E-23 163.7 12.3 105 90-200 36-141 (360)
16 3aey_A Threonine synthase; PLP 99.8 8.8E-18 3E-22 159.1 15.2 164 92-277 28-199 (351)
17 1v8z_A Tryptophan synthase bet 99.8 7.5E-18 2.6E-22 160.7 14.8 168 92-274 50-236 (388)
18 2zsj_A Threonine synthase; PLP 99.8 4.2E-18 1.4E-22 161.3 12.9 104 91-200 29-135 (352)
19 1ve1_A O-acetylserine sulfhydr 99.7 2.8E-17 9.7E-22 152.3 17.2 103 92-201 9-118 (304)
20 1p5j_A L-serine dehydratase; l 99.7 2.3E-18 7.8E-23 165.6 9.5 102 92-200 46-148 (372)
21 3dwg_A Cysteine synthase B; su 99.7 2.5E-17 8.5E-22 155.2 16.4 89 105-200 35-128 (325)
22 2pqm_A Cysteine synthase; OASS 99.7 4.1E-17 1.4E-21 154.7 16.4 107 87-200 18-133 (343)
23 2v03_A Cysteine synthase B; py 99.7 1.4E-16 4.7E-21 148.1 18.5 103 91-200 9-116 (303)
24 3l6b_A Serine racemase; pyrido 99.7 3.9E-18 1.3E-22 162.1 7.0 102 92-200 25-131 (346)
25 1z7w_A Cysteine synthase; tran 99.7 7.9E-17 2.7E-21 150.6 15.4 104 90-200 13-122 (322)
26 3pc3_A CG1753, isoform A; CBS, 99.7 2.1E-16 7.1E-21 157.3 16.5 104 90-200 58-168 (527)
27 2gn0_A Threonine dehydratase c 99.7 1E-17 3.6E-22 158.5 6.4 102 92-200 40-143 (342)
28 1y7l_A O-acetylserine sulfhydr 99.7 2.8E-16 9.6E-21 146.3 14.7 101 91-200 12-117 (316)
29 1o58_A O-acetylserine sulfhydr 99.7 7.3E-16 2.5E-20 143.2 14.1 99 91-200 19-120 (303)
30 4d9i_A Diaminopropionate ammon 99.7 7.8E-16 2.7E-20 148.6 14.1 103 92-200 44-167 (398)
31 1v71_A Serine racemase, hypoth 99.6 7.2E-16 2.4E-20 144.2 8.9 103 92-201 26-130 (323)
32 1jbq_A B, cystathionine beta-s 99.6 1.3E-15 4.6E-20 150.3 10.5 103 90-200 106-216 (435)
33 1ve5_A Threonine deaminase; ri 99.6 5.8E-15 2E-19 136.9 12.6 165 92-278 20-191 (311)
34 3vc3_A Beta-cyanoalnine syntha 99.6 5.5E-14 1.9E-18 133.8 17.1 102 93-201 36-143 (344)
35 3iau_A Threonine deaminase; py 99.5 5E-15 1.7E-19 141.5 5.9 100 91-202 59-164 (366)
36 3ss7_X D-serine dehydratase; t 99.4 5.6E-13 1.9E-17 131.1 13.7 156 106-278 100-292 (442)
37 1tdj_A Biosynthetic threonine 99.3 4.3E-12 1.5E-16 128.1 9.7 101 92-199 31-133 (514)
38 1e5x_A Threonine synthase; thr 99.3 4E-11 1.4E-15 119.5 15.9 103 92-200 130-240 (486)
39 1vb3_A Threonine synthase; PLP 99.2 4.5E-11 1.5E-15 117.0 8.2 153 108-278 92-261 (428)
40 1kl7_A Threonine synthase; thr 96.7 0.0082 2.8E-07 60.6 11.1 65 107-176 108-187 (514)
41 4f4f_A Threonine synthase; str 96.7 0.012 4.1E-07 58.8 12.1 82 108-195 102-191 (468)
42 3v7n_A Threonine synthase; ssg 95.8 0.056 1.9E-06 54.4 11.3 79 108-192 115-199 (487)
43 1rcu_A Conserved hypothetical 85.0 7.4 0.00025 34.5 10.6 65 107-175 26-90 (195)
44 1o98_A 2,3-bisphosphoglycerate 82.3 2.2 7.4E-05 43.3 6.7 104 128-231 96-221 (511)
45 3igz_B Cofactor-independent ph 81.6 11 0.00039 38.7 11.6 92 129-220 110-229 (561)
46 3iv3_A Tagatose 1,6-diphosphat 69.6 80 0.0027 30.2 13.7 152 106-299 87-286 (332)
47 3sbx_A Putative uncharacterize 69.3 19 0.00064 31.7 8.3 59 126-185 29-87 (189)
48 3qua_A Putative uncharacterize 61.9 44 0.0015 29.6 9.3 58 126-184 38-95 (199)
49 1weh_A Conserved hypothetical 61.1 20 0.00068 30.7 6.7 48 126-175 18-65 (171)
50 2a33_A Hypothetical protein; s 51.2 71 0.0024 28.4 8.9 49 126-175 30-78 (215)
51 3v8e_A Nicotinamidase; hydrola 50.3 47 0.0016 29.0 7.5 44 128-174 144-187 (216)
52 1wek_A Hypothetical protein TT 47.9 20 0.00068 32.1 4.7 46 127-174 55-100 (217)
53 3gbc_A Pyrazinamidase/nicotina 47.4 41 0.0014 28.6 6.4 44 128-174 115-158 (186)
54 1t35_A Hypothetical protein YV 43.0 86 0.003 27.1 7.9 49 126-175 18-66 (191)
55 4ffl_A PYLC; amino acid, biosy 42.8 25 0.00086 32.1 4.7 30 142-173 2-31 (363)
56 1j2r_A Hypothetical isochorism 38.9 51 0.0017 27.9 5.7 60 106-174 106-165 (199)
57 1nf9_A Phenazine biosynthesis 35.3 61 0.0021 27.7 5.7 44 128-174 132-175 (207)
58 2wt9_A Nicotinamidase; hydrola 35.3 59 0.002 28.6 5.7 44 128-174 157-200 (235)
59 1x9g_A Putative MAR1; structur 35.2 48 0.0017 28.7 5.1 41 133-174 100-140 (200)
60 1im5_A 180AA long hypothetical 34.8 66 0.0023 26.8 5.7 65 107-174 89-153 (180)
61 3r2j_A Alpha/beta-hydrolase-li 34.6 1E+02 0.0035 27.2 7.2 66 106-174 120-190 (227)
62 3o94_A Nicotinamidase; hydrola 33.2 89 0.003 27.4 6.5 44 128-174 133-176 (211)
63 3lqy_A Putative isochorismatas 32.8 70 0.0024 27.1 5.6 60 106-174 87-146 (190)
64 3irv_A Cysteine hydrolase; str 32.5 70 0.0024 28.2 5.7 60 106-174 113-172 (233)
65 2q5c_A NTRC family transcripti 31.8 39 0.0013 29.2 3.8 42 128-177 130-171 (196)
66 3hu5_A Isochorismatase family 31.3 78 0.0027 27.1 5.7 38 137-174 122-159 (204)
67 3hb7_A Isochorismatase hydrola 30.9 80 0.0027 27.1 5.7 43 129-174 111-153 (204)
68 3dnf_A ISPH, LYTB, 4-hydroxy-3 30.9 1.2E+02 0.0041 28.7 7.3 41 137-177 206-246 (297)
69 3eef_A N-carbamoylsarcosine am 30.6 85 0.0029 26.3 5.7 65 129-197 101-168 (182)
70 3txy_A Isochorismatase family 30.2 84 0.0029 26.9 5.7 44 128-174 116-159 (199)
71 1js3_A DDC;, DOPA decarboxylas 29.2 3.6E+02 0.012 25.2 10.4 87 123-212 108-226 (486)
72 3oqp_A Putative isochorismatas 28.7 87 0.003 27.3 5.6 60 106-174 83-142 (211)
73 3ot4_A Putative isochorismatas 28.5 95 0.0032 27.6 5.9 60 106-174 133-192 (236)
74 2fq1_A Isochorismatase; ENTB, 28.4 86 0.003 28.2 5.7 43 129-174 136-178 (287)
75 2gx8_A NIF3-related protein; s 28.1 71 0.0024 31.2 5.4 62 130-192 75-146 (397)
76 3kkj_A Amine oxidase, flavin-c 28.0 75 0.0026 24.7 4.6 29 141-172 3-31 (336)
77 1ve5_A Threonine deaminase; ri 27.8 28 0.00094 31.6 2.3 37 258-296 136-179 (311)
78 3gdg_A Probable NADP-dependent 27.7 52 0.0018 28.3 4.0 72 139-213 19-93 (267)
79 2a67_A Isochorismatase family 27.7 84 0.0029 26.0 5.1 59 106-173 75-133 (167)
80 1nba_A N-carbamoylsarcosine am 27.5 91 0.0031 28.2 5.7 58 106-173 138-196 (264)
81 3k5i_A Phosphoribosyl-aminoimi 27.5 68 0.0023 30.2 5.0 32 140-173 23-54 (403)
82 3k40_A Aromatic-L-amino-acid d 27.5 2.4E+02 0.0082 26.8 8.9 87 124-213 109-226 (475)
83 1jq5_A Glycerol dehydrogenase; 27.4 1E+02 0.0034 28.7 6.1 46 128-175 74-119 (370)
84 3tg2_A Vibriobactin-specific i 27.3 83 0.0028 27.7 5.3 44 128-174 128-171 (223)
85 3mcw_A Putative hydrolase; iso 25.4 98 0.0034 26.4 5.3 60 106-174 87-146 (198)
86 4h17_A Hydrolase, isochorismat 25.3 97 0.0033 26.5 5.2 60 106-174 97-156 (197)
87 4e1o_A HDC, histidine decarbox 25.0 1.2E+02 0.004 29.0 6.2 86 125-213 115-233 (481)
88 3f4w_A Putative hexulose 6 pho 24.4 1.6E+02 0.0054 24.6 6.4 42 131-172 68-109 (211)
89 3orq_A N5-carboxyaminoimidazol 23.9 79 0.0027 29.4 4.7 31 142-174 13-43 (377)
90 3kl2_A Putative isochorismatas 23.6 1.1E+02 0.0036 26.9 5.3 43 129-174 142-184 (226)
91 4fs3_A Enoyl-[acyl-carrier-pro 23.4 2.3E+02 0.0079 24.5 7.4 38 140-177 6-43 (256)
92 2q02_A Putative cytoplasmic pr 23.0 1.4E+02 0.0049 25.2 5.8 46 125-170 83-137 (272)
93 3h7a_A Short chain dehydrogena 22.9 2.7E+02 0.0092 23.8 7.7 36 140-177 7-42 (252)
94 4a29_A Engineered retro-aldol 22.5 1.1E+02 0.0037 28.5 5.2 47 130-176 116-163 (258)
95 3r3s_A Oxidoreductase; structu 22.1 2.1E+02 0.0071 25.3 6.9 34 140-175 49-82 (294)
96 3q2o_A Phosphoribosylaminoimid 21.8 91 0.0031 28.8 4.6 31 142-174 15-45 (389)
97 2p4s_A Purine nucleoside phosp 21.7 61 0.0021 31.5 3.5 44 106-151 160-203 (373)
98 3clh_A 3-dehydroquinate syntha 21.3 1E+02 0.0036 28.6 4.9 50 126-175 68-120 (343)
99 4e4t_A Phosphoribosylaminoimid 21.2 93 0.0032 29.6 4.7 31 141-173 35-65 (419)
100 3hl0_A Maleylacetate reductase 21.0 1.5E+02 0.0051 27.8 6.0 47 126-174 73-119 (353)
101 1g2o_A Purine nucleoside phosp 20.8 62 0.0021 29.6 3.2 44 106-151 79-122 (268)
102 1yac_A Ycacgp, YCAC gene produ 20.7 92 0.0031 26.9 4.2 38 137-174 101-138 (208)
103 1yx1_A Hypothetical protein PA 20.6 86 0.0029 26.9 4.0 45 127-171 84-130 (264)
104 1sg6_A Pentafunctional AROM po 20.3 1.5E+02 0.005 28.2 5.8 51 124-174 83-139 (393)
105 1p9o_A Phosphopantothenoylcyst 20.2 1.7E+02 0.006 27.5 6.2 50 127-176 23-89 (313)
106 3bq9_A Predicted rossmann fold 20.1 1.9E+02 0.0064 29.1 6.7 60 124-185 158-224 (460)
No 1
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=99.93 E-value=7.6e-26 Score=213.20 Aligned_cols=113 Identities=26% Similarity=0.273 Sum_probs=97.9
Q ss_pred CCCCcCccCCCCccCC-C-CeEEEEecCCC-CCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhC
Q 020509 90 NNTCPFLGDDMIMRDE-D-RCFYVVRDDLL-HPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~-G-~~l~IKRDDL~-h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
-.+||++..++|++.. | .+||+||||++ ++..|+||.||+.++|.+|.++|+++|||+|+.++||++|+|++|+++|
T Consensus 13 ~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~Gs~K~R~a~~~l~~a~~~g~~~vv~~G~ssGN~g~alA~~a~~~G 92 (341)
T 1f2d_A 13 FGPSPISNLNRLSQHLGSKVNVYAKREDCNSGLAFGGNKLRKLEYIVPDIVEGDYTHLVSIGGRQSNQTRMVAALAAKLG 92 (341)
T ss_dssp SSSCCEEECHHHHHHTTTCSEEEEEEGGGSCSSTTCCHHHHHHTTTHHHHHHSCCSEEEEEEETTCHHHHHHHHHHHHHT
T ss_pred CCCCcceeHHhHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhC
Confidence 3455555555566666 7 89999999996 8788999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccccC--------CccchhhHHHHhCC-eEEEECCCCc
Q 020509 167 LKSHLLLRGEQP--------QILTGYNLISTIYG-KVTYVPRTHY 202 (325)
Q Consensus 167 Lkcvlvlrge~~--------~~~tGN~ll~~LlG-~V~~V~r~~y 202 (325)
++|++||....+ ..+.+|+.+++.+| +|++++...+
T Consensus 93 ~~~~iv~p~~~~~~~~~~~~~~~~~k~~~~~~~GA~v~~~~~~~~ 137 (341)
T 1f2d_A 93 KKCVLIQEDWVPIPEAEKDVYNRVGNIELSRIMGADVRVIEDGFD 137 (341)
T ss_dssp CEEEEEEECCSCCCGGGTTTTTTSHHHHHHHHTTCEEEECCCCCC
T ss_pred CceEEEeccCCCccccccccccccccHHHHHhCCCEEEEeCCccc
Confidence 999999987664 12367999999999 9999988655
No 2
>4d9b_A D-cysteine desulfhydrase; fold type II PLP-dependent enzyme or tryptophan synthase BET like family, PLP dependent enzyme, lyase; HET: PMP; 1.67A {Salmonella typhimurium} PDB: 4d96_A* 4d9c_A* 4d9e_A* 4d9f_A* 4d97_A* 4d8w_A* 4d8u_A* 4d8t_A* 4d92_A* 4d99_A*
Probab=99.93 E-value=7.4e-26 Score=214.31 Aligned_cols=111 Identities=23% Similarity=0.282 Sum_probs=96.3
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
.+||++..++|++..|.+||+||||++++..|+||.||+.+++.+|+++|+++|||+||.++||++|+|++|+++|++|+
T Consensus 31 ~~TPL~~~~~l~~~~g~~v~~K~E~l~p~~~gs~K~R~~~~~l~~a~~~G~~~vv~~s~tsGN~g~alA~aa~~~G~~~~ 110 (342)
T 4d9b_A 31 APTPLEYLPRLSDYLGREIYIKRDDVTPIAMGGNKLRKLEFLVADALREGADTLITAGAIQSNHVRQTAAVAAKLGLHCV 110 (342)
T ss_dssp SCCCEEECHHHHHHHTSCEEEEEGGGCSSTTCCTHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHTCEEE
T ss_pred CCCceeEhhhhHHhhCCEEEEEeCCCCCCCCcchHHHhHHHHHHHHHHcCCCEEEEcCCcccHHHHHHHHHHHHhCCcEE
Confidence 44555555555555678999999999998789999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCc-----cchhhHHHHhCC-eEEEECCCC
Q 020509 171 LLLRGEQPQI-----LTGYNLISTIYG-KVTYVPRTH 201 (325)
Q Consensus 171 lvlrge~~~~-----~tGN~ll~~LlG-~V~~V~r~~ 201 (325)
+||....+.. ..+|+.+++.+| +|+++++.+
T Consensus 111 iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~ 147 (342)
T 4d9b_A 111 ALLENPIGTTAENYLTNGNRLLLDLFNTQIEMCDALT 147 (342)
T ss_dssp EEEECTTCCCCHHHHHSHHHHHHHHTTCEEEECSCCS
T ss_pred EEEeCCCCCccccccccchHHHHHHCCCEEEEECchh
Confidence 9998765432 257999999999 999998864
No 3
>1j0a_A 1-aminocyclopropane-1-carboxylate deaminase; PLP dependent, lyase; HET: PLP; 2.50A {Pyrococcus horikoshii} SCOP: c.79.1.1 PDB: 1j0b_A*
Probab=99.93 E-value=2.6e-25 Score=208.33 Aligned_cols=110 Identities=28% Similarity=0.343 Sum_probs=95.0
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
.+||++..++|++..|.+||+||||++++.+|+||.||+.+++.+|+++|+++|||+|+.++||++|+|++|+++|++|+
T Consensus 20 ~~TPL~~~~~l~~~~g~~i~~K~E~~~p~~~gs~K~R~~~~~i~~a~~~G~~~vv~~G~ssGN~g~alA~~a~~~G~~~~ 99 (325)
T 1j0a_A 20 WETPIQYLPNISREIGADVYIKRDDLTGLGIGGNKIRKLEYLLGDALSKGADVVITVGAVHSNHAFVTGLAAKKLGLDAI 99 (325)
T ss_dssp SCCCEEECHHHHHHHTSEEEEEEGGGSCSTTCSTHHHHHHHHHHHHHHTTCSEEEEECCTTCHHHHHHHHHHHHTTCEEE
T ss_pred CCCCceEhhhhhhhhCCEEEEEecccCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCcchHHHHHHHHHHHHhCCcEE
Confidence 34455444445555578999999999886679999999999999999999999999999999999999999999999999
Q ss_pred EEeccccCCccchhhHHHHhCC-eEEEECCCCc
Q 020509 171 LLLRGEQPQILTGYNLISTIYG-KVTYVPRTHY 202 (325)
Q Consensus 171 lvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y 202 (325)
+||.... ....|+.+++.+| +|++++...+
T Consensus 100 iv~p~~~--~~~~k~~~~~~~GA~v~~~~~~~~ 130 (325)
T 1j0a_A 100 LVLRGKE--ELKGNYLLDKIMGIETRVYDAKDS 130 (325)
T ss_dssp EEEESCC--CSCHHHHHHHHTTCEEEEESCCST
T ss_pred EEECCCC--CCCchHHHHHHCCCEEEEeCcchh
Confidence 9997654 2578899999999 9999998764
No 4
>1tzj_A ACC deaminase, 1-aminocyclopropane-1-carboxylate deaminase; substrate, PLP, crystal, complex, hydrolase; HET: PLP; 1.99A {Pseudomonas SP} SCOP: c.79.1.1 PDB: 1rqx_A* 1tz2_A* 1tyz_A* 1tzk_A* 1tzm_A*
Probab=99.91 E-value=3.3e-24 Score=200.79 Aligned_cols=113 Identities=27% Similarity=0.282 Sum_probs=93.6
Q ss_pred CCCCcCccCCCCccCC-C-CeEEEEecCCC-CCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhC
Q 020509 90 NNTCPFLGDDMIMRDE-D-RCFYVVRDDLL-HPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~-G-~~l~IKRDDL~-h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
..+||++..++|++.. | .+||+||||++ ++..|+||.||+.++|.+|+++|+++|||+|+.++||++|+|++|+++|
T Consensus 13 ~~~TPL~~~~~l~~~~~g~~~i~~K~E~~n~p~~~gs~K~R~a~~~l~~a~~~g~~~vv~~GassGN~g~alA~~a~~~G 92 (338)
T 1tzj_A 13 FGPTPIQPLARLSKHLGGKVHLYAKREDCNSGLAFGGNKTRKLEYLIPEALAQGCDTLVSIGGIQSNQTRQVAAVAAHLG 92 (338)
T ss_dssp SSSCCEEECHHHHHHTTSSSEEEEEEGGGSCSSTTCCHHHHHHHTTHHHHHHTTCCEEEEEEETTCHHHHHHHHHHHHHT
T ss_pred CCCCccEEHHHHHHhhCCCceEEEEeCCCCCCCCCCchHHHHHHHHHHHHHHcCCCEEEEcCCchhHHHHHHHHHHHHhC
Confidence 3445555544555555 6 79999999996 7567999999999999999999999999999999999999999999999
Q ss_pred CeEEEEeccccCC-----ccchhhHHHHhCC-eEEEECCCCc
Q 020509 167 LKSHLLLRGEQPQ-----ILTGYNLISTIYG-KVTYVPRTHY 202 (325)
Q Consensus 167 Lkcvlvlrge~~~-----~~tGN~ll~~LlG-~V~~V~r~~y 202 (325)
++|+++|....+. .+++|+.+++.+| +|+.++...+
T Consensus 93 ~~~~iv~p~~~~~~~~~~~~~~k~~~~~~~GA~V~~~~~~~~ 134 (338)
T 1tzj_A 93 MKCVLVQENWVNYSDAVYDRVGNIQMSRILGADVRLVPDGFD 134 (338)
T ss_dssp CEEEEEEECCSSCCCTTTTTSHHHHHHHHTTCEEEECCC---
T ss_pred CceEEEecCCCCccccccccCccHHHHHhCCCEEEEeCCcch
Confidence 9999999876533 2457999999999 9999987653
No 5
>2o2e_A Tryptophan synthase beta chain; amino-acid biosynthesis, tryptophan biosynthesis, structural genomics; 2.20A {Mycobacterium tuberculosis} PDB: 2o2j_A
Probab=99.85 E-value=4.2e-21 Score=187.82 Aligned_cols=176 Identities=16% Similarity=0.179 Sum_probs=132.1
Q ss_pred CCCCCccccccCCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEE-eCcccchHHHH
Q 020509 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHATA 157 (325)
Q Consensus 79 ~~g~~~pi~~l~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT-~GG~QSNH~~A 157 (325)
+.|++|||.++++++..++ |.+||+||||++|+ |..|.|...+.+..|+++|++.+|+ +|+ .||++|
T Consensus 77 ~~g~~TPL~~~~~Ls~~~g--------g~~i~lK~E~lnpt--GSfK~R~a~~~~~~a~~~g~~~vI~~~ss--GNhG~A 144 (422)
T 2o2e_A 77 YAGRPSPLYEATRLSQHAG--------SARIFLKREDLNHT--GSHKINNVLGQALLARRMGKTRVIAETGA--GQHGVA 144 (422)
T ss_dssp TSSCSCCEEECGGGGGGTT--------TCEEEEECGGGCCS--STTHHHHHHHHHHHHHHTTCCEEEEEESS--SHHHHH
T ss_pred hCCCCCCeEEChhhHhhcC--------CCeEEEEEcCCCCC--CcHHHHHHHHHHHHHHHcCCCeEEEecCc--cHHHHH
Confidence 5666667766666554332 57999999999994 6788888888888888999998887 555 469999
Q ss_pred HHHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHHHHHh---------ccc----cc--
Q 020509 158 VAVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYANLV---------AGN----NG-- 221 (325)
Q Consensus 158 tAaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~~~~---------~Ga----sG-- 221 (325)
+|++|+++|++|+++|......++..|+.+++.+| +|+.++.++.+.++++.++.+++. .+. .-
T Consensus 145 ~A~aaa~~G~~~~I~mp~~~~~~q~~kv~~~~~~GA~Vv~v~~~~~~~~da~~~a~~~~~~~~~~~~yi~~s~~g~~p~~ 224 (422)
T 2o2e_A 145 TATACALLGLDCVIYMGGIDTARQALNVARMRLLGAEVVAVQTGSKTLKDAINEAFRDWVANADNTYYCFGTAAGPHPFP 224 (422)
T ss_dssp HHHHHHHHTCEEEEEEEHHHHHHSHHHHHHHHHTTCEEEEECSTTSCHHHHHHHHHHHHHHHTTTEEECCCCSSSCCCCH
T ss_pred HHHHHHHcCCcEEEEeCCCcchhhHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhcCCCcEEEeCCccCCCCcH
Confidence 99999999999999998754445678999999999 999998754445555554433322 111 11
Q ss_pred -chhhHHHHHHHHHHHhhhhhccccccchhhhhhccCCcEEEEeCCCcchhhh-hhhc
Q 020509 222 -DVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVAL-LVLI 277 (325)
Q Consensus 222 -~vr~~~eI~~qe~~~q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~-lGyi 277 (325)
+++.+|.+++.|+.+|+.+ ..+..++.++++.|||++..|+ .++.
T Consensus 225 ~~v~~~q~t~g~Ei~~Ql~~-----------~~~~~pD~vvvpvG~GG~~~Gi~~~~~ 271 (422)
T 2o2e_A 225 TMVRDFQRIIGMEARVQIQG-----------QAGRLPDAVVACVGGGSNAIGIFHAFL 271 (422)
T ss_dssp HHHHHHTTHHHHHHHHHHHH-----------HSSSCCSEEEEEGGGHHHHHTTSGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHH-----------hhCCCCCEEEEccCCchhHHHHHHHHh
Confidence 2345789999999988865 2345688999999999999998 4553
No 6
>1qop_B Tryptophan synthase beta chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.79.1.1 PDB: 1k7e_B* 1k7f_B* 1kfb_B* 1k3u_B* 1tjp_B* 1wbj_B* 2cli_B* 2clk_B* 2cll_B* 2j9x_B* 3cep_B* 1kfc_B* 1k8x_B* 1kfj_B* 1kfk_B* 2rh9_B* 2rhg_B* 2j9y_B* 1cw2_B* 1a5s_B* ...
Probab=99.81 E-value=1.1e-19 Score=174.84 Aligned_cols=175 Identities=17% Similarity=0.197 Sum_probs=126.7
Q ss_pred CCCCCccccccCCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEE-eCcccchHHHH
Q 020509 79 GGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHATA 157 (325)
Q Consensus 79 ~~g~~~pi~~l~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT-~GG~QSNH~~A 157 (325)
+.|++|||..+++ |++..|.+||+||||+++ .|..|.|..-+.+..|+++|++++|+ ++++ ||++|
T Consensus 51 ~ig~~TPL~~~~~---------l~~~~g~~i~lK~E~l~p--tGSfK~R~a~~~~~~a~~~g~~~vi~e~ssG--Nhg~a 117 (396)
T 1qop_B 51 YAGRPTALTKCQN---------ITAGTRTTLYLKREDLLH--GGAHKTNQVLGQALLAKRMGKSEIIAETGAG--QHGVA 117 (396)
T ss_dssp TTCCSCCEEECHH---------HHTTSSEEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEEESSS--HHHHH
T ss_pred hCCCCCCcEEhhh---------hhhccCCeEEEEeccCCC--CCcHHHHHHHHHHHHHHHcCcCEEEEecCch--HHHHH
Confidence 4555555555554 455557899999999998 46899999988888899999999999 6665 69999
Q ss_pred HHHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHHHHHh---------ccc-ccc----
Q 020509 158 VAVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYANLV---------AGN-NGD---- 222 (325)
Q Consensus 158 tAaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~~~~---------~Ga-sG~---- 222 (325)
+|++|+++|++|+++|...+......|+.+++.+| +|+.++.++...++++.++...+. .+. .+.
T Consensus 118 ~A~aa~~~G~~~~i~mp~~~~~~~~~~~~~~~~~GA~V~~v~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~ 197 (396)
T 1qop_B 118 SALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYP 197 (396)
T ss_dssp HHHHHHHHTCEEEEEEEHHHHHHCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHH
T ss_pred HHHHHHHCCCcEEEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHhccCCcEEEeCCcCCCCCch
Confidence 99999999999999997643334567889999999 999998753334444443332211 111 111
Q ss_pred --hhhHHHHHHHHHHHhhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhhhhc
Q 020509 223 --VVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLI 277 (325)
Q Consensus 223 --vr~~~eI~~qe~~~q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi 277 (325)
++..+..++.|+.+|+.+ .....++.+++..|||++..|+.-..
T Consensus 198 ~~v~~g~~t~~~Ei~~Ql~~-----------~~~~~~d~vvvpvG~GG~~~Gi~~~~ 243 (396)
T 1qop_B 198 TIVREFQRMIGEETKAQILD-----------KEGRLPDAVIACVGGGSNAIGMFADF 243 (396)
T ss_dssp HHHHHTTTHHHHHHHHHHHH-----------HHSSCCSEEEEECSSSHHHHHHHGGG
T ss_pred HHHHHHHhHHHHHHHHHHHH-----------hcCCCCCEEEEcCCchHHHHHHHHHH
Confidence 233577888888888754 22446788888889999998886433
No 7
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=99.81 E-value=3e-19 Score=176.51 Aligned_cols=110 Identities=14% Similarity=0.089 Sum_probs=94.9
Q ss_pred ccccccCCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC-----CeEEEeCcccchHHHHH
Q 020509 84 GGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLVTCGGCQSAHATAV 158 (325)
Q Consensus 84 ~pi~~l~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~-----~~LVT~GG~QSNH~~At 158 (325)
..+...-.+||++..++|++..|.+||+||||++++ |+||.|++.+.+.+|+++|+ ++||+.++ +||++|+
T Consensus 115 ~~i~~~ig~TPLv~l~~Ls~~~g~~I~lK~E~lnpt--GSfKdRgA~~~i~~A~~~G~l~~g~~~VV~aSs--GNhG~Al 190 (430)
T 4aec_A 115 DNVSQLIGKTPMVYLNSIAKGCVANIAAKLEIMEPC--CSVKDRIGYSMVTDAEQKGFISPGKSVLVEPTS--GNTGIGL 190 (430)
T ss_dssp SSGGGGSSCCCEEECCGGGTTCSSEEEEEEGGGSTT--SBTTHHHHHHHHHHHHHTTSCCTTTCEEEEECS--SHHHHHH
T ss_pred hhhhccCCCCCeEEChhhhhhcCCeEEEEECCCCCC--CCHHHHHHHHHHHHHHHcCCCCCCCcEEEEECC--CHHHHHH
Confidence 345555667888888888888899999999999985 79999999999999999987 78998765 8999999
Q ss_pred HHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 159 AVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 159 AaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
|++|+++|++|++||... ....+..+++.+| +|+.++++
T Consensus 191 A~aAa~~Gl~~~IvmP~~---~s~~k~~~~r~~GAeVv~v~~~ 230 (430)
T 4aec_A 191 AFIAASRGYRLILTMPAS---MSMERRVLLKAFGAELVLTDPA 230 (430)
T ss_dssp HHHHHHHTCEEEEEEETT---SCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHhCCEEEEEEcCC---CCHHHHHHHHHCCCEEEEECCC
Confidence 999999999999999654 3456888899999 99999864
No 8
>1wkv_A Cysteine synthase; homodimer, open alpha/beta folding, transferase; HET: PLP; 2.00A {Aeropyrum pernix} SCOP: c.79.1.1
Probab=99.81 E-value=1.7e-19 Score=175.52 Aligned_cols=166 Identities=10% Similarity=0.018 Sum_probs=120.9
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHH---hhhCCCCeEEEeCcccchHHHHHHHHHHHhCC
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPL---LEDHIVTDLVTCGGCQSAHATAVAVSCAERGL 167 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~d---A~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGL 167 (325)
++||++..++|++. |.+||+||||++|. .|.||.|++.+.+.+ ++++| ++|| ++.++||++|+|++|+++|+
T Consensus 95 ~~TPL~~l~~Ls~~-g~~IylK~E~lnp~-tGS~K~R~a~~~i~~l~~a~~~g-~~Iv--~assGNhG~AlA~aaa~~Gl 169 (389)
T 1wkv_A 95 KPTPLVRSRLQLPN-GVRVWLKLEWYNPF-SLSVKDRPAVEIISRLSRRVEKG-SLVA--DATSSNFGVALSAVARLYGY 169 (389)
T ss_dssp CSCCEEECCCCCST-TEEEEEEEGGGSTT-TSBTTHHHHHHHHHHHTTTSCTT-CEEE--EECCHHHHHHHHHHHHHTTC
T ss_pred CCCCeEEccccccC-CCeEEEEEcCCCCC-cCChHHHHHHHHHHHHHHHHhcC-CEEE--EECCcHHHHHHHHHHHHcCC
Confidence 45666666666665 78999999999762 467999999999999 77788 7777 45667899999999999999
Q ss_pred eEEEEeccccCCccchhhHHHHhCC-eEE-EECCCCccchHHHHHHH--HHHh-------cccccchhhHHHHHHHHHHH
Q 020509 168 KSHLLLRGEQPQILTGYNLISTIYG-KVT-YVPRTHYAHRIEMLKSY--ANLV-------AGNNGDVVWCNEIFEASLTA 236 (325)
Q Consensus 168 kcvlvlrge~~~~~tGN~ll~~LlG-~V~-~V~r~~y~~kda~~e~~--~~~~-------~GasG~vr~~~eI~~qe~~~ 236 (325)
+|+++|.... ...+..+++++| +|+ .++++++. +++.++. .+.. .+....++..|..++.|+.+
T Consensus 170 ~~~ivmp~~~---~~~k~~~~~~~GAeVv~~v~~~~~~--da~~~a~~~~~~~g~~~~~p~~N~~~~~~~~~t~g~Ei~~ 244 (389)
T 1wkv_A 170 RARVYLPGAA---EEFGKLLPRLLGAQVIVDPEAPSTV--HLLPRVMKDSKNEGFVHVNQFYNDANFEAHMRGTAREIFV 244 (389)
T ss_dssp EEEEEEETTS---CHHHHHHHHHTTCEEEEETTCSSSG--GGHHHHHHHHHHHCCEECCTTTCHHHHHHHHHTHHHHHHH
T ss_pred eEEEEECCCC---CHHHHHHHHHcCCEEEEEcCCCCHH--HHHHHHHHHHHccCcEecCcCCChHHHHHHHHHHHHHHHH
Confidence 9999998653 235777899999 999 77755543 2222221 1111 11123456678888899988
Q ss_pred hhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhhhhcc
Q 020509 237 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLIP 278 (325)
Q Consensus 237 q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi~ 278 (325)
|+.+ ....++.++++.|||+|..|++-++.
T Consensus 245 Q~~~------------~g~~~D~vv~~vG~GG~~~Gi~~~~k 274 (389)
T 1wkv_A 245 QSRR------------GGLALRGVAGSLGTSGHMSAAAFYLQ 274 (389)
T ss_dssp HHHH------------TTCCEEEEEECCSSSHHHHHHHHHHH
T ss_pred HHHh------------cCCCCCEEEEeCCchHhHHHHHHHHH
Confidence 8744 23456777888888999999876654
No 9
>1x1q_A Tryptophan synthase beta chain; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 2.50A {Thermus thermophilus}
Probab=99.80 E-value=1.3e-19 Score=176.50 Aligned_cols=171 Identities=15% Similarity=0.146 Sum_probs=124.2
Q ss_pred CCcCccCCCCccCC-CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEE-eCcccchHHHHHHHHHHHhCCeE
Q 020509 92 TCPFLGDDMIMRDE-DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHATAVAVSCAERGLKS 169 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~-G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT-~GG~QSNH~~AtAaaAa~lGLkc 169 (325)
+||++..++|++.. |.+||+||||+++ .|.+|.|...+.+..|.++|++.+|+ ++++ ||+.|+|++|+++|++|
T Consensus 77 ~TPL~~~~~Ls~~~gg~~i~lK~E~l~p--tGSfK~R~a~~~i~~a~~~g~~~vI~~~ssG--Nhg~avA~aaa~~Gi~~ 152 (418)
T 1x1q_A 77 PTPLYHAKRLSEYWGGAQVFLKREDLLH--TGAHKINNTLGQALLARRMGKRRVIAETGAG--QHGVSVATVAALFGLEC 152 (418)
T ss_dssp SCCEEECHHHHHHHTSSEEEEEEGGGSG--GGBTTHHHHHHHHHHHHHHTCCEEEEECSSS--HHHHHHHHHHHHHTCEE
T ss_pred CCCcEEhHHhHhhcCCceEEEEEccCCc--CccHHHHHHHHHHHHHHHcCCCEEEEecCch--HHHHHHHHHHHHcCCCE
Confidence 34444444444444 5799999999998 46899999999998888899998887 4544 79999999999999999
Q ss_pred EEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHHHHHh---------cc----cccc---hhhHHHHHHH
Q 020509 170 HLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYANLV---------AG----NNGD---VVWCNEIFEA 232 (325)
Q Consensus 170 vlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~~~~---------~G----asG~---vr~~~eI~~q 232 (325)
+++|......++..|+..++.+| +|+.++.++.+..+++.++..++. .+ ..-+ ++..|..++.
T Consensus 153 ~I~mp~~~~~~~~~kv~~~~~~GA~Vv~v~~~~~~~~~a~~~a~~~~~~~~~~~~~i~~~~~n~~p~~~~v~~gq~t~~~ 232 (418)
T 1x1q_A 153 VVYMGEEDVRRQALNVFRMKLLGAEVRPVAAGSRTLKDATNEAIRDWITNVRTTFYILGSVVGPHPYPMMVRDFQSVIGE 232 (418)
T ss_dssp EEEEEHHHHHTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHTTTTEEECCCCSSSSTTHHHHHHHHHTHHHH
T ss_pred EEEECCCcchhhhHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCcEEEeCCccCCCCcHHHHHHHHHHHHH
Confidence 99998654445668999999999 999998643334455444333222 11 1111 2336788888
Q ss_pred HHHHhhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhhhhc
Q 020509 233 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLI 277 (325)
Q Consensus 233 e~~~q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi 277 (325)
|+.+|+.+ .....++.+++..|||++..|+.-++
T Consensus 233 Ei~~Ql~~-----------~~~~~~D~vvvpvGgGG~~~Gi~~~~ 266 (418)
T 1x1q_A 233 EVKRQSLE-----------LFGRLPDALIAAVGGGSNAIGLFAPF 266 (418)
T ss_dssp HHHHHHHH-----------HHSSCCSEEEEECSSSSHHHHHHHHH
T ss_pred HHHHHHHh-----------hcCCCCCEEEEecCCcHhHHHHHHHH
Confidence 98888755 22345788899999999999987554
No 10
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=99.79 E-value=2e-19 Score=172.23 Aligned_cols=101 Identities=13% Similarity=0.098 Sum_probs=86.0
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHL 171 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvl 171 (325)
+||++..++|++..|.+||+||||+++ .|+||.|++.+++.+|.++|+++|||.++ +||++|+|++|+++|++|++
T Consensus 46 ~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~vv~aSs--GN~g~alA~aa~~~G~~~~i 121 (364)
T 4h27_A 46 KTPIRDSMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCSSS--GNAGMAAAYAARQLGVPATI 121 (364)
T ss_dssp CCCEEEEHHHHHHHTSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEECCS--SHHHHHHHHHHHHHTCCEEE
T ss_pred cCCeEEChhhHHHhCCEEEEEeCCCCC--CCCHHHHHHHHHHHHHHhcCCCEEEEeCC--ChHHHHHHHHHHHhCCceEE
Confidence 455555555556667899999999997 49999999999999999999999999887 89999999999999999999
Q ss_pred EeccccCCccchhhHHHHhCC-eEEEECC
Q 020509 172 LLRGEQPQILTGYNLISTIYG-KVTYVPR 199 (325)
Q Consensus 172 vlrge~~~~~tGN~ll~~LlG-~V~~V~r 199 (325)
+|.... ...+...++.+| +|+.++.
T Consensus 122 v~p~~~---~~~k~~~~~~~GA~Vv~v~~ 147 (364)
T 4h27_A 122 VVPGTT---PALTIERLKNEGATVKVVGE 147 (364)
T ss_dssp EEETTS---CHHHHHHHHTTTCEEEEECS
T ss_pred EECCCC---CHHHHHHHHHcCCEEEEECC
Confidence 997543 345677788899 9999975
No 11
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=99.77 E-value=5.1e-18 Score=160.59 Aligned_cols=120 Identities=16% Similarity=0.107 Sum_probs=92.9
Q ss_pred cCCCCccceeeccccccCCCCCCCccccccCCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhC
Q 020509 60 TSPDSKIHQIKLFTTTEKHGGGPLGGISFLNNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDH 139 (325)
Q Consensus 60 p~p~~~I~~~~l~~~~~~~~~g~~~pi~~l~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~ 139 (325)
|.|+..|+++.=... .+.+ +|||..++ +| +..|.+||+||||++++ |+||.|++.+.+.+|.+.
T Consensus 2 ~~p~~~i~~~~~~i~---~~ig-~TPL~~l~---------~l-~~~g~~i~~K~E~~~pt--GSfK~R~a~~~i~~a~~~ 65 (334)
T 3tbh_A 2 AAPFDKSKNVAQSID---QLIG-QTPALYLN---------KL-NNTKAKVVLKMECENPM--ASVKDRLGFAIYDKAEKE 65 (334)
T ss_dssp CCCCCTTTSCCSSGG---GGSS-CCCEEECC---------TT-CCSSSEEEEEEGGGSTT--SBTHHHHHHHHHHHHHHT
T ss_pred CCchhhHHHHHHHHH---HhcC-CCCeEECC---------cc-cCCCCEEEEEeCCCCCc--cCcHHHHHHHHHHHHHHc
Confidence 678888877621111 1233 24554444 44 34478999999999984 799999999999999999
Q ss_pred CC----CeE-EEeCcccchHHHHHHHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 140 IV----TDL-VTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 140 G~----~~L-VT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
|+ +++ |+.++ +||++|+|++|+++|++|+++|... ....+..+++.+| +|+.++..
T Consensus 66 g~l~~g~~vvv~aSs--GN~g~alA~aa~~~G~~~~iv~p~~---~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 66 GKLIPGKSIVVESSS--GNTGVSLAHLGAIRGYKVIITMPES---MSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp TSCCTTTCEEEEECS--SHHHHHHHHHHHHHTCEEEEEEETT---SCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCCCeEEEEeCC--CHHHHHHHHHHHHhCCCEEEEECCC---CCHHHHHHHHHCCCEEEEECCC
Confidence 98 884 88754 8999999999999999999999654 3456788899999 99999865
No 12
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=99.77 E-value=1.9e-18 Score=160.45 Aligned_cols=103 Identities=16% Similarity=0.187 Sum_probs=87.3
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHHHhC
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
.+||++..++|++..|.+||+||||+++ .|+||.|++.+++.+|+++|+ ++||+ +.++||++|+|++|+++|
T Consensus 13 ~~TPL~~l~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~a~A~~a~~~G 88 (308)
T 2egu_A 13 GDTPAVKLNRIVDEDSADVYLKLEFMNP--GSSVKDRIALAMIEAAEKAGKLKPGDTIVE--PTSGNTGIGLAMVAAAKG 88 (308)
T ss_dssp SCCCEEECCSSSCTTSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECCHHHHHHHHHHHHHHT
T ss_pred CCCCeEECCcccccCCCEEEEEecccCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHHHHHHHHcC
Confidence 3455555556666668899999999965 499999999999999999887 78888 677899999999999999
Q ss_pred CeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 167 LKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 167 Lkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|+++|.... ...+..+++.+| +|+.++..
T Consensus 89 ~~~~iv~p~~~---~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 89 YKAVLVMPDTM---SLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp CEEEEEEESCS---CHHHHHHHHHTTCEEEEECGG
T ss_pred CCEEEEECCCC---CHHHHHHHHHcCCEEEEECCC
Confidence 99999997643 356888899999 99999864
No 13
>2rkb_A Serine dehydratase-like; PLP bound enzyme, enzyme found in human cells, lyase, pyridoxal phosphate; HET: PLP; 2.80A {Homo sapiens}
Probab=99.77 E-value=7.8e-19 Score=163.68 Aligned_cols=103 Identities=13% Similarity=0.111 Sum_probs=86.8
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
.+||++..++|++..|.+||+||||+++ .|+||.|++.++|.+|.++|.++||+.++ +||++|+|++|+++|++|+
T Consensus 6 ~~TPL~~~~~l~~~~g~~v~~K~E~~~p--tgS~K~R~a~~~l~~a~~~g~~~vv~~ss--GN~g~alA~~a~~~G~~~~ 81 (318)
T 2rkb_A 6 VVTPLLESWALSQVAGMPVFLKCENVQP--SGSFKIRGIGHFCQEMAKKGCRHLVCSSG--GNAGIAAAYAARKLGIPAT 81 (318)
T ss_dssp CCCCEEEEHHHHHHHTSCEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCEEEECCC--SHHHHHHHHHHHHHTCCEE
T ss_pred ccCCceehHhhHHHhCCeEEEEecCCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEECC--chHHHHHHHHHHHcCCCEE
Confidence 3566665555666567899999999975 39999999999999999999999999876 8999999999999999999
Q ss_pred EEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 171 LLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 171 lvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|.... ...+...++.+| +|+.++..
T Consensus 82 i~~p~~~---~~~k~~~~~~~Ga~V~~~~~~ 109 (318)
T 2rkb_A 82 IVLPEST---SLQVVQRLQGEGAEVQLTGKV 109 (318)
T ss_dssp EEECTTC---CHHHHHHHHHTTCEEEECCSS
T ss_pred EEECCCC---cHHHHHHHHhcCCEEEEECCC
Confidence 9997643 345667789999 99998763
No 14
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=99.76 E-value=5.4e-18 Score=157.72 Aligned_cols=166 Identities=14% Similarity=0.103 Sum_probs=114.2
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHHHhC
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
.+||++..++|++..|.+||+||||+++ .|+||.|++.+++.+|.+.|+ ++||+ +.++||++|+|++|+++|
T Consensus 15 ~~TPL~~~~~l~~~~g~~i~~K~E~~~p--tgSfK~R~a~~~l~~a~~~g~~~~g~~vv~--assGN~g~alA~~a~~~G 90 (313)
T 2q3b_A 15 GRTPLVRLRRVTDGAVADIVAKLEFFNP--ANSVKDRIGVAMLQAAEQAGLIKPDTIILE--PTSGNTGIALAMVCAARG 90 (313)
T ss_dssp CCCCEEECSSSCTTCCSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEE--ECSSHHHHHHHHHHHHHT
T ss_pred CCCceEECcccccccCcEEEEEehhcCC--CCcHHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHHHHHHHHcC
Confidence 4566666566666668899999999985 599999999999999999887 78888 788999999999999999
Q ss_pred CeEEEEeccccCCccchhhHHHHhCC-eEEEECCCC-ccchHHHHHHHHHH------hcccccchhh-H-HHHHHHHHHH
Q 020509 167 LKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTH-YAHRIEMLKSYANL------VAGNNGDVVW-C-NEIFEASLTA 236 (325)
Q Consensus 167 Lkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~-y~~kda~~e~~~~~------~~GasG~vr~-~-~eI~~qe~~~ 236 (325)
++|+++|.... ...+..+++.+| +|+.++... +....+..+.+.+. +.+..-...+ + +..++.|+.+
T Consensus 91 ~~~~iv~p~~~---~~~k~~~~~~~Ga~v~~~~~~~~~~~~~~~a~~l~~~~~~~~~~~~~~n~~~~~~~~~t~~~Ei~~ 167 (313)
T 2q3b_A 91 YRCVLTMPETM---SLERRMLLRAYGAELILTPGADGMSGAIAKAEELAKTDQRYFVPQQFENPANPAIHRVTTAEEVWR 167 (313)
T ss_dssp CEEEEEEETTS---CHHHHHHHHHTTCEEEEECGGGHHHHHHHHHHHHHHHCTTEECCCTTTCTHHHHHHHHTHHHHHHH
T ss_pred CcEEEEECCCC---CHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHHHHhCCCEEeCCCCCChhhHHHHHHHHHHHHHH
Confidence 99999997643 356788899999 999998642 32222222222111 1111112222 2 3444555543
Q ss_pred hhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhhhhcc
Q 020509 237 QKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLIP 278 (325)
Q Consensus 237 q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi~ 278 (325)
|+ ...++.+++-.|+|++..|+.-+++
T Consensus 168 q~---------------~~~~d~vvvpvG~GG~~~Gi~~~~k 194 (313)
T 2q3b_A 168 DT---------------DGKVDIVVAGVGTGGTITGVAQVIK 194 (313)
T ss_dssp HT---------------TTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred Hc---------------CCCCCEEEEccCcchhHHHHHHHHH
Confidence 33 2235666666667777777765554
No 15
>2d1f_A Threonine synthase; amino acid synthesis, pyridoxal-5'-phosphate, PLP, lyase; HET: PLP; 2.50A {Mycobacterium tuberculosis}
Probab=99.76 E-value=2.5e-18 Score=163.74 Aligned_cols=105 Identities=13% Similarity=0.167 Sum_probs=89.2
Q ss_pred CCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeE
Q 020509 90 NNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKS 169 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkc 169 (325)
..+||++..++|++..|.+||+||||+++ .|+||.|++.+++.+|+++|+++||+. .++||++|+|++|+++|++|
T Consensus 36 ~g~TPL~~~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~l~~a~~~g~~~vv~a--SsGN~g~alA~~a~~~G~~~ 111 (360)
T 2d1f_A 36 EGGTPLIAATNLSKQTGCTIHLKVEGLNP--TGSFKDRGMTMAVTDALAHGQRAVLCA--STGNTSASAAAYAARAGITC 111 (360)
T ss_dssp CCCCCEEECHHHHHHHSSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCSEEEEC--CSSHHHHHHHHHHHHHTCEE
T ss_pred cCCCCCeechhhHHHhCCeEEEEECCCCC--CcCHHHHHHHHHHHHHHHCCCCEEEEe--CCcHHHHHHHHHHHHcCCcE
Confidence 34555555555565567899999999985 699999999999999999999999997 68999999999999999999
Q ss_pred EEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 170 HLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 170 vlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++++.... ....+..+++.+| +|+.++..
T Consensus 112 ~i~~p~~~--~~~~k~~~~~~~GA~v~~v~~~ 141 (360)
T 2d1f_A 112 AVLIPQGK--IAMGKLAQAVMHGAKIIQIDGN 141 (360)
T ss_dssp EEEECSSC--CCHHHHHHHHHTTCEEEEBSSC
T ss_pred EEEEcCCC--CCHHHHHHHHHcCCEEEEECCC
Confidence 99997642 3457888999999 99999874
No 16
>3aey_A Threonine synthase; PLP, pyridoxal phosphate, lyase; 1.92A {Thermus thermophilus} PDB: 1uin_A* 1uim_A* 3aex_A* 1v7c_A
Probab=99.76 E-value=8.8e-18 Score=159.07 Aligned_cols=164 Identities=12% Similarity=0.123 Sum_probs=114.0
Q ss_pred CCcCccC--CCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeE
Q 020509 92 TCPFLGD--DMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKS 169 (325)
Q Consensus 92 ~tp~l~~--~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkc 169 (325)
+||++.. ++|++..|.+||+||||+++ .|+||.|++.++|.+|.++|+++||+. .++||++|+|++|+++|++|
T Consensus 28 ~TPL~~~~~~~l~~~~g~~v~~K~E~~~p--tgS~KdR~a~~~l~~a~~~g~~~vv~~--SsGN~g~alA~~a~~~G~~~ 103 (351)
T 3aey_A 28 STPLIPLKGPEEARKKGIRLYAKYEGLNP--TGSFKDRGMTLAVSKAVEGGAQAVACA--STGNTAASAAAYAARAGILA 103 (351)
T ss_dssp CCCEEECCCCHHHHTTTCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCSEEEES--CSSHHHHHHHHHHHHHTSEE
T ss_pred CCCeeecCchhhHHHhCCeEEEEecCCCC--cccHHHHHHHHHHHHHHhcCCCEEEEe--CCCHHHHHHHHHHHHcCCCE
Confidence 4454444 45566668899999999985 699999999999999999999999997 78999999999999999999
Q ss_pred EEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHHHHH----hc-ccccchhhHHHHHHHHHHHhhhhhcc
Q 020509 170 HLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYANL----VA-GNNGDVVWCNEIFEASLTAQKSRASC 243 (325)
Q Consensus 170 vlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~~~----~~-GasG~vr~~~eI~~qe~~~q~~~~~~ 243 (325)
++++.... ....+..+++.+| +|+.++.. +....+..+.+.+. +. +.+-.....+..++.|+.+|+
T Consensus 104 ~iv~p~~~--~~~~k~~~~~~~GA~V~~v~~~-~~~~~~~a~~l~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~----- 175 (351)
T 3aey_A 104 IVVLPAGY--VALGKVAQSLVHGARIVQVEGN-FDDALRLTQKLTEAFPVALVNSVNPHRLEGQKTLAFEVVDEL----- 175 (351)
T ss_dssp EEEEETTC--SCHHHHHHHHHTTCEEEEEESC-HHHHHHHHHHHHHHSSEEECSTTCHHHHHHHHHHHHHHHHHH-----
T ss_pred EEEECCCC--CCHHHHHHHHHcCCEEEEECCC-HHHHHHHHHHHHHhcCcEecCCCCccceeeeeeHHHHHHHHc-----
Confidence 99997642 3467888999999 99999874 32222222222221 11 111112223444455554333
Q ss_pred ccccchhhhhhccCCcEEEEeCCCcchhhhhhhc
Q 020509 244 LGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLI 277 (325)
Q Consensus 244 ~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi 277 (325)
...++.+++-.|+|++..|+.-++
T Consensus 176 ----------~~~~d~vvvpvG~GG~~~Gi~~~~ 199 (351)
T 3aey_A 176 ----------GDAPHYHALPVGNAGNITAHWMGY 199 (351)
T ss_dssp ----------SSCCSEEEEECSSSHHHHHHHHHH
T ss_pred ----------CCCCCEEEEecCchHHHHHHHHHH
Confidence 233566666666777777765544
No 17
>1v8z_A Tryptophan synthase beta chain 1; beta+alpha, riken structural genomics/proteomics initiative, structural genomics, lyase; HET: PLP; 2.21A {Pyrococcus furiosus} SCOP: c.79.1.1 PDB: 1wdw_B*
Probab=99.75 E-value=7.5e-18 Score=160.73 Aligned_cols=168 Identities=16% Similarity=0.150 Sum_probs=115.2
Q ss_pred CCcCccCCCCccCCC-CeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEE-eCcccchHHHHHHHHHHHhCCeE
Q 020509 92 TCPFLGDDMIMRDED-RCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVT-CGGCQSAHATAVAVSCAERGLKS 169 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G-~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT-~GG~QSNH~~AtAaaAa~lGLkc 169 (325)
+||++..++|++..| .+||+||||+++ .|.+|.|...+.+..|.++|++++|+ .+++ ||++|+|++|+++|++|
T Consensus 50 ~TPL~~~~~l~~~~g~~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~vv~~~ssG--N~g~a~A~aa~~~G~~~ 125 (388)
T 1v8z_A 50 PTPLYYAKRLTEKIGGAKIYLKREDLVH--GGAHKTNNAIGQALLAKFMGKTRLIAETGAG--QHGVATAMAGALLGMKV 125 (388)
T ss_dssp SCCEEECHHHHHHHTSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCEEEEEESSS--HHHHHHHHHHHHTTCEE
T ss_pred CCCceehHhhHhhcCCceEEEEeccCCC--CCCHHHHHHHHHHHHHHHcCCCEEEEecCch--HHHHHHHHHHHHcCCcE
Confidence 344444444444444 799999999986 36799999999999999999999997 5554 79999999999999999
Q ss_pred EEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHH---HHH-----h-cc----cccc---hhhHHHHHHH
Q 020509 170 HLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSY---ANL-----V-AG----NNGD---VVWCNEIFEA 232 (325)
Q Consensus 170 vlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~---~~~-----~-~G----asG~---vr~~~eI~~q 232 (325)
+++|..........|+.+++.+| +|+.++.++....++..++. .+. + .+ ...+ ++..|..++.
T Consensus 126 ~iv~p~~~~~~~~~~~~~~~~~GA~V~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~n~~p~~~~~~~~~~t~~~ 205 (388)
T 1v8z_A 126 DIYMGAEDVERQKMNVFRMKLLGANVIPVNSGSRTLKDAINEALRDWVATFEYTHYLIGSVVGPHPYPTIVRDFQSVIGR 205 (388)
T ss_dssp EEEEEHHHHTTCHHHHHHHHHTTCEEEEECSTTSSHHHHHHHHHHHHHHHTTTEEECCCSSCSSTTHHHHHHHHHHHHHH
T ss_pred EEEEcCCchhhhhhHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHhCCCceEecCCccCCCCchhHHHHHhHHHHH
Confidence 99997643334557888999999 99999864322333333221 111 1 11 1111 1335778888
Q ss_pred HHHHhhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhh
Q 020509 233 SLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALL 274 (325)
Q Consensus 233 e~~~q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~l 274 (325)
|+.+|+.+ .....++.+++..|||++..|+.
T Consensus 206 Ei~~q~~~-----------~~~~~~d~vvvpvG~GG~~aGi~ 236 (388)
T 1v8z_A 206 EAKAQILE-----------AEGQLPDVIVACVGGGSNAMGIF 236 (388)
T ss_dssp HHHHHHHH-----------HHSSCCSEEEEECSSSHHHHHHH
T ss_pred HHHHHHHH-----------hcCCCCCEEEEecCccHhHHHHH
Confidence 88777644 11334677777777777777775
No 18
>2zsj_A Threonine synthase; PLP dependent enzyme, lyase; HET: PLP; 1.80A {Aquifex aeolicus}
Probab=99.75 E-value=4.2e-18 Score=161.31 Aligned_cols=104 Identities=20% Similarity=0.247 Sum_probs=87.5
Q ss_pred CCCcCccCCCCccCCCCe--EEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCe
Q 020509 91 NTCPFLGDDMIMRDEDRC--FYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLK 168 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~--l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLk 168 (325)
.+||++..++|++..|++ ||+||||+++ .|+||.|++.+.+.+|.++|+++||+. .++||+.|+|++|+++|++
T Consensus 29 g~TPL~~~~~l~~~~g~~~~i~~K~E~~~p--tGS~KdR~a~~~l~~a~~~g~~~vv~~--SsGN~g~alA~~a~~~G~~ 104 (352)
T 2zsj_A 29 GNTPLIEADNLARAIGFKGKIYLKYEGLNP--TGSFKDRGMTLAISKAVEAGKRAVICA--STGNTSASAAAYAARAGLR 104 (352)
T ss_dssp CCCCEEECHHHHHHHTCCSEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCEEEEC--CSSHHHHHHHHHHHHHTCE
T ss_pred CCCCCeehHHHHHHhCCCceEEEEECCCCC--CccHHHHHHHHHHHHHHhcCCCEEEEe--CCchHHHHHHHHHHhcCCc
Confidence 345555444455555777 9999999985 699999999999999999999999997 7899999999999999999
Q ss_pred EEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 169 SHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 169 cvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
|++++.... ....+..+++.+| +|+.++..
T Consensus 105 ~~i~~p~~~--~~~~k~~~~~~~GA~v~~v~~~ 135 (352)
T 2zsj_A 105 AYVLLPKGA--VAIGKLSQAMIYGAKVLAIQGT 135 (352)
T ss_dssp EEEEEEGGG--CCHHHHHHHHHTTCEEEEESSC
T ss_pred EEEEECCCC--CCHHHHHHHHHcCCEEEEECCC
Confidence 999997642 3456888899999 99999874
No 19
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=99.75 E-value=2.8e-17 Score=152.26 Aligned_cols=103 Identities=13% Similarity=0.136 Sum_probs=86.9
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----C--eEEEeCcccchHHHHHHHHHHHh
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----T--DLVTCGGCQSAHATAVAVSCAER 165 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~--~LVT~GG~QSNH~~AtAaaAa~l 165 (325)
+||++..++|++..|.+||+||||+++ .|+||.|++.+++.+|++.|. + +||+ +.++||++|+|++|+++
T Consensus 9 ~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~g~~~~vv~--assGN~g~a~A~~a~~~ 84 (304)
T 1ve1_A 9 KTPVVRLAKVVEPDMAEVWVKLEGLNP--GGSIKDRPAWYMIKDAEERGILRPGSGQVIVE--PTSGNTGIGLAMIAASR 84 (304)
T ss_dssp CCCEEECCSSSCTTSCEEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTSCCTTSCCEEEE--SCCSHHHHHHHHHHHHH
T ss_pred CCCcEECcccccccCCEEEEEecccCC--CCcHHHHHHHHHHHHHHHcCCCCCCCccEEEE--eCCcHHHHHHHHHHHHc
Confidence 455555555666668899999999975 478999999999999999887 6 8888 47899999999999999
Q ss_pred CCeEEEEeccccCCccchhhHHHHhCC-eEEEECCCC
Q 020509 166 GLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTH 201 (325)
Q Consensus 166 GLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~ 201 (325)
|++|++++.... ...+..+++.+| +|+.++...
T Consensus 85 G~~~~i~~p~~~---~~~k~~~~~~~Ga~V~~~~~~~ 118 (304)
T 1ve1_A 85 GYRLILTMPAQM---SEERKRVLKAFGAELVLTDPER 118 (304)
T ss_dssp TCEEEEEEETTC---CHHHHHHHHHTTCEEEEECTTT
T ss_pred CCcEEEEeCCCC---CHHHHHHHHHcCCEEEEECCCC
Confidence 999999997643 457888999999 999998753
No 20
>1p5j_A L-serine dehydratase; lyase; HET: PLP; 2.50A {Homo sapiens} SCOP: c.79.1.1 PDB: 1pwh_A* 1pwe_A*
Probab=99.74 E-value=2.3e-18 Score=165.60 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=86.3
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHL 171 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvl 171 (325)
+||++..++|++..|.+||+||||+++ .|+||.|++.+.|.+|.+.|.++||+.++ +||++|+|++|+++|++|++
T Consensus 46 ~TPL~~l~~l~~~~g~~i~~K~E~~~p--tGSfKdRga~~~l~~a~~~g~~~vv~aSs--GN~g~alA~aa~~~G~~~~i 121 (372)
T 1p5j_A 46 KTPIRDSMALSKMAGTSVYLKMDSAQP--SGSFKIRGIGHFCKRWAKQGCAHFVCSSA--GNAGMAAAYAARQLGVPATI 121 (372)
T ss_dssp CCCEEEEHHHHHHHTSCEEEECGGGSG--GGBTTHHHHHHHHHHHHHTTCCEEEECCS--SHHHHHHHHHHHHHTCCEEE
T ss_pred CCCceEcHhhHHHhCCEEEEEEcCCCC--CCChHHHHHHHHHHHHHHcCCCEEEEeCC--CHHHHHHHHHHHHcCCcEEE
Confidence 444444444555557899999999985 69999999999999999999999999877 89999999999999999999
Q ss_pred EeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 172 LLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 172 vlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+|.... ...+..+++.+| +|+.++..
T Consensus 122 v~p~~~---~~~k~~~~~~~GA~V~~~~~~ 148 (372)
T 1p5j_A 122 VVPGTT---PALTIERLKNEGATCKVVGEL 148 (372)
T ss_dssp EECTTC---CHHHHHHHHHTTCEEEECCSC
T ss_pred EECCCC---CHHHHHHHHhcCCEEEEECCC
Confidence 997653 457888899999 99998763
No 21
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=99.74 E-value=2.5e-17 Score=155.17 Aligned_cols=89 Identities=9% Similarity=0.145 Sum_probs=78.5
Q ss_pred CCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHHHhCCeEEEEeccccCCc
Q 020509 105 EDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQPQI 180 (325)
Q Consensus 105 ~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~~~~ 180 (325)
.|.+||+||||++++ |+||.|++.+++.+|++.|+ ++||+.. .+||++|+|++|+++|++|++++... .
T Consensus 35 ~g~~v~~K~E~~~pt--GSfK~R~a~~~l~~a~~~g~l~~~~~vv~aS--sGN~g~alA~aa~~~G~~~~iv~p~~---~ 107 (325)
T 3dwg_A 35 PHVRLWAKLEDRNPT--GSIKDRPAVRMIEQAEADGLLRPGATILEPT--SGNTGISLAMAARLKGYRLICVMPEN---T 107 (325)
T ss_dssp CCEEEEEEETTSSTT--SBTTHHHHHHHHHHHHHTTCCCTTCEEEEEC--SSHHHHHHHHHHHHHTCEEEEEEESS---S
T ss_pred CCcEEEEEECCCCCC--CChHHHHHHHHHHHHHHcCCCCCCCEEEEeC--CcHHHHHHHHHHHHcCCcEEEEECCC---C
Confidence 478999999999984 89999999999999999998 8999964 48999999999999999999999654 3
Q ss_pred cchhhHHHHhCC-eEEEECCC
Q 020509 181 LTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 181 ~tGN~ll~~LlG-~V~~V~r~ 200 (325)
...+..+++.+| +|+.++..
T Consensus 108 ~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 108 SVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp CHHHHHHHHHHTCEEEEECST
T ss_pred CHHHHHHHHHCCCEEEEECCC
Confidence 456788889999 99999864
No 22
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=99.74 E-value=4.1e-17 Score=154.70 Aligned_cols=107 Identities=8% Similarity=0.045 Sum_probs=91.5
Q ss_pred cccCCCCcCccCCCCcc----CCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHH
Q 020509 87 SFLNNTCPFLGDDMIMR----DEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAV 158 (325)
Q Consensus 87 ~~l~~~tp~l~~~~Ls~----~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~At 158 (325)
...-.+||++..++|++ ..|.+||+||||+++ .|++|.|++.+++.+|.+.|+ ++||+.++ +||++|+
T Consensus 18 ~~~~g~TPL~~~~~l~~~~~~~~g~~v~~K~E~~~p--tGSfKdR~a~~~l~~a~~~g~~~~g~~vv~aSs--GN~g~al 93 (343)
T 2pqm_A 18 LETIGGTPLVELHGVTEHPRIKKGTRILVKLEYFNP--MSSVKDRVGFNIVYQAIKDGRLKPGMEIIESTS--GNTGIAL 93 (343)
T ss_dssp GGGSSCCCEEECCGGGCSTTSCTTCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHHTSSCTTCEEEEECS--SHHHHHH
T ss_pred HhhcCCCCeEECCccccccccccCcEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEECC--cHHHHHH
Confidence 33345688888777777 668999999999987 588999999999999998887 78999876 8999999
Q ss_pred HHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 159 AVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 159 AaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
|++|+++|++|+++|.... ...+..+++.+| +|+.++..
T Consensus 94 A~aa~~~G~~~~iv~p~~~---~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 94 CQAGAVFGYRVNIAMPSTM---SVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp HHHHHHHTCCEEEEEETTS---CHHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHcCCCEEEEECCCC---CHHHHHHHHHCCCEEEEECCC
Confidence 9999999999999997642 456888899999 99999864
No 23
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=99.73 E-value=1.4e-16 Score=148.12 Aligned_cols=103 Identities=15% Similarity=0.174 Sum_probs=86.8
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHHHhC
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
.+||++..++|++..|.+||+||||+++ .|++|.|++.+++.+|++.|. ++||+.+ .+||++|+|++|+++|
T Consensus 9 ~~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~g~~vv~~s--sGN~g~a~A~~a~~~G 84 (303)
T 2v03_A 9 GNTPLVKLQRMGPDNGSEVWLKLEGNNP--AGSVKDRAALSMIVEAEKRGEIKPGDVLIEAT--SGNTGIALAMIAALKG 84 (303)
T ss_dssp SCCCEEECSSSSCSSSCEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTCCCTTCEEEEEC--SSHHHHHHHHHHHHHT
T ss_pred CCCCcEECcccccccCCEEEEEeccCCC--CCCcHHHHHHHHHHHHHHcCCCCCCCEEEEEC--CcHHHHHHHHHHHHcC
Confidence 3455555555666668899999999985 488999999999999999887 8999986 4899999999999999
Q ss_pred CeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 167 LKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 167 Lkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|++++... ....+..+++.+| +|+.++..
T Consensus 85 ~~~~iv~p~~---~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 85 YRMKLLMPDN---MSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp CEEEEEEETT---SCHHHHHHHHHTTCEEEEECTT
T ss_pred CcEEEEECCC---CCHHHHHHHHHcCCEEEEECCC
Confidence 9999999764 2456788899999 99999874
No 24
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=99.72 E-value=3.9e-18 Score=162.12 Aligned_cols=102 Identities=15% Similarity=0.192 Sum_probs=83.4
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhC----CCCeEEEeCcccchHHHHHHHHHHHhCC
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDH----IVTDLVTCGGCQSAHATAVAVSCAERGL 167 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~----G~~~LVT~GG~QSNH~~AtAaaAa~lGL 167 (325)
+||++..++|++..|.+||+||||+++ .|+||.|++.+.+.+|.+. +.++|||++ .+||++|+|++|+++|+
T Consensus 25 ~TPL~~~~~l~~~~g~~i~~K~E~~~p--tGSfK~Rga~~~i~~a~~~g~~~~~~~vv~~S--sGNhg~a~A~aa~~~G~ 100 (346)
T 3l6b_A 25 LTPVLTSSILNQLTGRNLFFKCELFQK--TGSFKIRGALNAVRSLVPDALERKPKAVVTHS--SGNHGQALTYAAKLEGI 100 (346)
T ss_dssp CCCEECCHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHTTC-----CCCSCEEEEC--SSHHHHHHHHHHHHTTC
T ss_pred CCCeEEchhhHHHhCCeEEEEeCCCCC--CCCcHHHHHHHHHHHHHHhccccCCCEEEEeC--CCHHHHHHHHHHHHhCC
Confidence 444444444555557899999999997 5999999999999999774 788999986 48999999999999999
Q ss_pred eEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 168 KSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 168 kcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+|+++|... ....+..+++.+| +|+.++..
T Consensus 101 ~~~iv~p~~---~~~~k~~~~~~~GA~V~~v~~~ 131 (346)
T 3l6b_A 101 PAYIVVPQT---APDCKKLAIQAYGASIVYCEPS 131 (346)
T ss_dssp CEEEEEETT---SCHHHHHHHHHTTCEEEEECSS
T ss_pred CEEEEECCC---CCHHHHHHHHHCCCEEEEECCC
Confidence 999999654 3456788899999 99999864
No 25
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=99.72 E-value=7.9e-17 Score=150.64 Aligned_cols=104 Identities=12% Similarity=0.095 Sum_probs=88.0
Q ss_pred CCCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC-----CeEEEeCcccchHHHHHHHHHHH
Q 020509 90 NNTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV-----TDLVTCGGCQSAHATAVAVSCAE 164 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~-----~~LVT~GG~QSNH~~AtAaaAa~ 164 (325)
-.+||++..++|++..|.+||+||||+++ .|+||.|++.+.|.+|++.|+ ++||+. .++||+.|+|++|++
T Consensus 13 ~~~TPL~~~~~l~~~~g~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~G~~~~~~~~vv~a--ssGN~g~alA~aa~~ 88 (322)
T 1z7w_A 13 IGNTPLVYLNNVAEGCVGRVAAKLEMMEP--CSSVKDRIGFSMISDAEKKGLIKPGESVLIEP--TSGNTGVGLAFTAAA 88 (322)
T ss_dssp SSCCCEEECCGGGTTCSSEEEEEEGGGST--TSBTHHHHHHHHHHHHHHTTSCCTTTCEEEEE--CSSHHHHHHHHHHHH
T ss_pred cCCCCeEECccccccCCceEEEEecccCC--CCchHHHHHHHHHHHHHHcCCCCCCCCEEEEe--CCCHHHHHHHHHHHH
Confidence 34566666666666668899999999985 588999999999999999998 788884 478999999999999
Q ss_pred hCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 165 RGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 165 lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+|++|++++... ....+..+++.+| +|+.++..
T Consensus 89 ~G~~~~iv~p~~---~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 89 KGYKLIITMPAS---MSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HTCEEEEEEETT---SCHHHHHHHHHTTCEEEEECGG
T ss_pred cCCCEEEEeCCC---CCHHHHHHHHHcCCEEEEeCCC
Confidence 999999999764 2456888899999 99999864
No 26
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.70 E-value=2.1e-16 Score=157.26 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=89.9
Q ss_pred CCCCcCccCCCCccCCC--CeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHH
Q 020509 90 NNTCPFLGDDMIMRDED--RCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCA 163 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~G--~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa 163 (325)
-.+||++..++|++..| .+||+||||++++ |++|.|++.+++.+|+++|+ ++||+ +.++||++|+|++|+
T Consensus 58 ig~TPl~~l~~l~~~~g~~~~i~~K~E~~~pt--GS~K~R~a~~~i~~a~~~g~~~~g~~vv~--~ssGN~g~a~A~~a~ 133 (527)
T 3pc3_A 58 IGCTPLVKLNNIPASDGIECEMYAKCEFLNPG--GSVKDRIGYRMVQDAEEQGLLKPGYTIIE--PTSGNTGIGLAMACA 133 (527)
T ss_dssp SSCCCEEECCSHHHHTTCCSEEEEEEGGGSTT--SBTTHHHHHHHHHHHHHHTCCCTTCEEEE--ECSSHHHHHHHHHHH
T ss_pred cCCCCcEEcchhhhhcCCCcEEEEEeccCCCC--CCHHHHHHHHHHHHHHHcCCCCCCCEEEE--eCCCHHHHHHHHHHH
Confidence 34678887777777666 6999999999985 89999999999999999998 88988 477899999999999
Q ss_pred HhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 164 ERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 164 ~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|++|+++|... ....+..+++.+| +|+.++.+
T Consensus 134 ~~G~~~~iv~p~~---~~~~k~~~~~~~GA~v~~~~~~ 168 (527)
T 3pc3_A 134 VKGYKCIIVMPEK---MSNEKVSALRTLGAKIIRTPTE 168 (527)
T ss_dssp HHTCEEEEEEETT---SCHHHHHHHHHTTCEEEEECTT
T ss_pred HhCCeEEEEEcCC---CCHHHHHHHHHCCCEEEEeCCC
Confidence 9999999999653 3457888899999 99999864
No 27
>2gn0_A Threonine dehydratase catabolic; TDCB, biodegradative threonine deaminase, PLP, threonine DEH L-threonine metabolism; HET: LLP; 1.70A {Salmonella typhimurium} PDB: 2gn1_A* 2gn2_A*
Probab=99.70 E-value=1e-17 Score=158.52 Aligned_cols=102 Identities=15% Similarity=0.190 Sum_probs=83.7
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhh-hCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~-~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
+||++..++|++..|.+||+||||+++ .|+||.|++.+.|.+|+ +.+.++||+. .++||+.|+|++|+++|++|+
T Consensus 40 ~TPL~~l~~l~~~~g~~i~~K~E~~~p--tGSfKdR~a~~~i~~a~~~~~~~~vv~~--ssGN~g~alA~aa~~~G~~~~ 115 (342)
T 2gn0_A 40 KTGMPRSNYFSERCKGEIFLKFENMQR--TGSFKIRGAFNKLSSLTEAEKRKGVVAC--SAGNHAQGVSLSCAMLGIDGK 115 (342)
T ss_dssp CCCCCBCHHHHHHHTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSCHHHHHTCEEEE--CSSHHHHHHHHHHHHHTCCEE
T ss_pred CCCceEchhhHHHhCCEEEEEEccCCC--cCChHHHHHHHHHHHHHHhcCCCEEEEE--CCChHHHHHHHHHHHcCCCEE
Confidence 344444444455557899999999986 39999999999999986 4678899997 479999999999999999999
Q ss_pred EEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 171 LLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 171 lvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|.... ...+..+++.+| +|+.++..
T Consensus 116 iv~p~~~---~~~k~~~~~~~GA~V~~~~~~ 143 (342)
T 2gn0_A 116 VVMPKGA---PKSKVAATCDYSAEVVLHGDN 143 (342)
T ss_dssp EEECTTS---CHHHHHHHHHHSCEEEECCSS
T ss_pred EEECCCC---CHHHHHHHHHcCCEEEEECCC
Confidence 9997543 467888999999 99998764
No 28
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=99.69 E-value=2.8e-16 Score=146.32 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=84.0
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHHHHhC
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSCAERG 166 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaAa~lG 166 (325)
.+||++..++| + .|.+||+||||+++ .|++|.|++.+++.+|++.|. ++||+.+ .+||+.|+|++|+++|
T Consensus 12 ~~TPL~~l~~l-~-~g~~i~~K~E~~~p--tGSfK~R~a~~~i~~a~~~g~~~~~~~vv~~s--sGN~g~a~A~~a~~~G 85 (316)
T 1y7l_A 12 GNTPLVRLKHF-G-HNGNVVVKIEGRNP--SYSVKCRIGANMVWQAEKDGTLTKGKEIVDAT--SGNTGIALAYVAAARG 85 (316)
T ss_dssp CCCCEEECSSS-S-STTCEEEEETTSSG--GGBTHHHHHHHHHHHHHHTTSSCTTCEEEESC--CSHHHHHHHHHHHHHT
T ss_pred CCCCcEECccC-C-CCCEEEEEeccCCC--CCChHHHHHHHHHHHHHHcCCCCCCCEEEEeC--CcHHHHHHHHHHHHcC
Confidence 34555554555 4 47799999999966 388999999999999999887 7899975 4899999999999999
Q ss_pred CeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 167 LKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 167 Lkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
++|+++|... ....+..+++.+| +|+.++..
T Consensus 86 ~~~~iv~p~~---~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 86 YKITLTMPET---MSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp CCEEEEEETT---SCHHHHHHHHHTTCEEEEECGG
T ss_pred CcEEEEECCC---CCHHHHHHHHHcCCEEEEeCCC
Confidence 9999999764 3456888899999 99999864
No 29
>1o58_A O-acetylserine sulfhydrylase; TM0665, structural genomics, J protein structure initiative, joint center for structural G transferase; 1.80A {Thermotoga maritima} SCOP: c.79.1.1 PDB: 3fca_A*
Probab=99.66 E-value=7.3e-16 Score=143.22 Aligned_cols=99 Identities=15% Similarity=0.143 Sum_probs=82.1
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCC--CeEEEeCcccchHHHHHHHHHHHhCCe
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIV--TDLVTCGGCQSAHATAVAVSCAERGLK 168 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~--~~LVT~GG~QSNH~~AtAaaAa~lGLk 168 (325)
.+||++..++|+ .+||+||||+++ .|+||.|++.+++.+|+++|. +.||+ +.++||++|+|++|+++|++
T Consensus 19 ~~TPL~~l~~l~----~~v~~K~E~~~p--tGSfK~R~a~~~l~~a~~~g~~~~~vv~--aSsGN~g~a~A~aa~~~G~~ 90 (303)
T 1o58_A 19 GSTPIVRLDSID----SRIFLKLEKNNP--GGSVKDRPALFMILDAEKRGLLKNGIVE--PTSGNMGIAIAMIGAKRGHR 90 (303)
T ss_dssp CCCCEEECTTTC----TTEEEEEGGGST--TSBTTHHHHHHHHHHHHHTTCCTTCEEE--ECSSHHHHHHHHHHHHHTCC
T ss_pred CCCCeEECccCC----ceEEEEecCCCC--CCChHHHHHHHHHHHHHHcCCCCCCEEE--ECchHHHHHHHHHHHHcCCc
Confidence 345555544443 579999999985 599999999999999998887 67775 47799999999999999999
Q ss_pred EEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 169 SHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 169 cvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
|++++.... ...+..+++.+| +|+.++..
T Consensus 91 ~~iv~p~~~---~~~k~~~~~~~GA~V~~~~~~ 120 (303)
T 1o58_A 91 VILTMPETM---SVERRKVLKMLGAELVLTPGE 120 (303)
T ss_dssp EEEEEETTS---CHHHHHHHHHTTCEEEEECGG
T ss_pred EEEEECCCC---CHHHHHHHHHcCCEEEEECCC
Confidence 999997643 456888899999 99999864
No 30
>4d9i_A Diaminopropionate ammonia-lyase; fold type II PLP-dependent enzyme, tryptophan synthase beta like PLP-dependent enzymes superfamily; HET: IT1; 2.00A {Escherichia coli} PDB: 4d9g_A* 4d9n_A* 4d9k_A* 4d9m_A*
Probab=99.66 E-value=7.8e-16 Score=148.61 Aligned_cols=103 Identities=11% Similarity=-0.028 Sum_probs=82.4
Q ss_pred CCcCccCCCCccCCC-CeEEEEecCCCCCCCCChhHhhHHhhHHHhhh------------------CCCC-eEEEeCccc
Q 020509 92 TCPFLGDDMIMRDED-RCFYVVRDDLLHPLVNGNKARKMDALLPLLED------------------HIVT-DLVTCGGCQ 151 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G-~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~------------------~G~~-~LVT~GG~Q 151 (325)
+||++..++|++..| .+||+||||++++ .|.+|.|...+.+.++++ .+.+ +||| +.+
T Consensus 44 ~TPL~~~~~l~~~~g~~~i~~K~E~~~~p-tgSfK~Rga~~~i~~~~~~~~G~~~~~l~~e~l~~~~~~~~~vv~--aSs 120 (398)
T 4d9i_A 44 PTPLCALDDLANLFGVKKILVKDESKRFG-LNAFXMLGGAYAIAQLLCEKYHLDIETLSFEHLKNAIGEKMTFAT--TTD 120 (398)
T ss_dssp CCCEEECHHHHHHHTSSEEEEEEGGGSTT-TTBSTHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHCCSCCCEEEE--ECS
T ss_pred CCCceehHHHHHHhCCCcEEEEECCCCCC-CCcchhhhhHHHHHHHHHHhhcccccccchhhhhhhccCCCEEEE--ECC
Confidence 444444444555557 4999999999954 589999999999998832 4577 8888 678
Q ss_pred chHHHHHHHHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 152 SAHATAVAVSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 152 SNH~~AtAaaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+||++|+|++|+++|++|+++|... ....+...++.+| +|+.++..
T Consensus 121 GNhg~a~A~aa~~~G~~~~iv~p~~---~~~~k~~~~~~~GA~Vv~v~~~ 167 (398)
T 4d9i_A 121 GNHGRGVAWAAQQLGQNAVIYMPKG---SAQERVDAILNLGAECIVTDMN 167 (398)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEECTT---CCHHHHHHHHTTTCEEEECSSC
T ss_pred CHHHHHHHHHHHHcCCCEEEEEeCC---CCHHHHHHHHHcCCEEEEECCC
Confidence 9999999999999999999999653 3456778889999 99999873
No 31
>1v71_A Serine racemase, hypothetical protein C320.14 in chromosome III; dimer, PLP, isomerase; HET: PLP; 1.70A {Schizosaccharomyces pombe} SCOP: c.79.1.1 PDB: 1wtc_A* 2zpu_A* 2zr8_A*
Probab=99.62 E-value=7.2e-16 Score=144.22 Aligned_cols=103 Identities=17% Similarity=0.194 Sum_probs=82.4
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhh-hCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~-~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
+||++..++|++..|.+||+||||++++ |.+|.|...+.+.++. +++.++||+.. ++||++|+|++|+++|++|+
T Consensus 26 ~TPL~~~~~l~~~~g~~i~~K~E~~~pt--GS~KdRga~~~i~~~~~~~~~~~vv~~s--sGN~g~alA~~a~~~G~~~~ 101 (323)
T 1v71_A 26 KTPVLTSSTVNKEFVAEVFFKCENFQKM--GAFKFRGALNALSQLNEAQRKAGVLTFS--SGNHAQAIALSAKILGIPAK 101 (323)
T ss_dssp CCCEECCHHHHHHHTSEEEEEEGGGSGG--GBTHHHHHHHHHTTCCHHHHHHCEEECC--SSHHHHHHHHHHHHTTCCEE
T ss_pred CCCceEhHhhHHHhCCeEEEEecCCCCc--CCHHHHHHHHHHHHHHHhcCCCeEEEeC--CCcHHHHHHHHHHHcCCCEE
Confidence 3444444445555578999999999873 6799999999998764 35678899984 59999999999999999999
Q ss_pred EEeccccCCccchhhHHHHhCC-eEEEECCCC
Q 020509 171 LLLRGEQPQILTGYNLISTIYG-KVTYVPRTH 201 (325)
Q Consensus 171 lvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~ 201 (325)
++|.... ...+..+++.+| +|+.++...
T Consensus 102 iv~p~~~---~~~k~~~~~~~GA~V~~~~~~~ 130 (323)
T 1v71_A 102 IIMPLDA---PEAKVAATKGYGGQVIMYDRYK 130 (323)
T ss_dssp EEEETTC---CHHHHHHHHHTTCEEEEECTTT
T ss_pred EECCCCC---cHHHHHHHHHcCCEEEEECCCH
Confidence 9997653 345777889999 999998754
No 32
>1jbq_A B, cystathionine beta-synthase, serine sulfhydrase; fold type II of PLP enzymes, lyase; HET: HEM PLP; 2.60A {Homo sapiens} SCOP: c.79.1.1 PDB: 1m54_A*
Probab=99.61 E-value=1.3e-15 Score=150.27 Aligned_cols=103 Identities=12% Similarity=0.109 Sum_probs=84.2
Q ss_pred CCCCcCccCCCCccCCC--CeEEEEecCCCCCCCCCh-hHhhHHhhHHHhhhCCC----CeEEEeCcccchHHHHHHHHH
Q 020509 90 NNTCPFLGDDMIMRDED--RCFYVVRDDLLHPLVNGN-KARKMDALLPLLEDHIV----TDLVTCGGCQSAHATAVAVSC 162 (325)
Q Consensus 90 ~~~tp~l~~~~Ls~~~G--~~l~IKRDDL~h~~lgGN-K~RKLeylL~dA~~~G~----~~LVT~GG~QSNH~~AtAaaA 162 (325)
-.+||++..++|++..| .+||+||||+++ +|+ |.|++.++|.+|++.|. ++||+..++ ||++|+|++|
T Consensus 106 ig~TPLv~l~~Ls~~~G~~~~v~lK~E~~np---tGSfKdR~a~~~i~~a~~~G~l~~g~tVV~aSsG--N~G~AlA~aa 180 (435)
T 1jbq_A 106 IGDTPMVRINKIGKKFGLKCELLAKCEFFNA---GGSVKDRISLRMIEDAERDGTLKPGDTIIEPTSG--NTGIGLALAA 180 (435)
T ss_dssp SSCCCEEECCSHHHHTTCCSEEEEEEGGGST---TSBTHHHHHHHHHHHHHHHTCSCTTCEEEEECSS--HHHHHHHHHH
T ss_pred CCCCCeEECcchhhHhCCCceEEEEECCCCC---cCCHHHHHHHHHHHHHHHcCCCCCCCEEEEeCCC--HHHHHHHHHH
Confidence 34677777777777666 689999999975 566 99999999999999885 789963222 9999999999
Q ss_pred HHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 163 AERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 163 a~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+++|++|++||.... ...++.+++.+| +|+.++..
T Consensus 181 a~~Gi~~~IvmP~~~---s~~k~~~l~~~GAeVv~v~~~ 216 (435)
T 1jbq_A 181 AVRGYRCIIVMPEKM---SSEKVDVLRALGAEIVRTPTN 216 (435)
T ss_dssp HHHTCEEEEEECSCC---CHHHHHHHHHTTCEEEECCC-
T ss_pred HHcCCeEEEEeCCCC---CHHHHHHHHhCCCEEEEecCC
Confidence 999999999997543 345788899999 99999864
No 33
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=99.59 E-value=5.8e-15 Score=136.94 Aligned_cols=165 Identities=19% Similarity=0.149 Sum_probs=106.0
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHL 171 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvl 171 (325)
+||++..++|++..|.+||+||||+++ .|-.|.|..-+.+..+. +.++||+.+ ++||++|+|++|+++|++|++
T Consensus 20 ~TPL~~~~~l~~~~g~~i~~K~E~~~p--tgSfKdR~a~~~i~~l~--~~~~vv~~s--sGN~g~alA~~a~~~G~~~~i 93 (311)
T 1ve5_A 20 RTPLLTSRLLDGLLGKRLLLKAEHLQK--TGSFKARGALSKALALE--NPKGLLAVS--SGNHAQGVAYAAQVLGVKALV 93 (311)
T ss_dssp CCCEEECHHHHHHTTSEEEEEEGGGSG--GGBTHHHHHHHHHHHSS--SCCCEEEEC--SSHHHHHHHHHHHHHTCCEEE
T ss_pred CCCceechhhHHhhCCeEEEEecCCCC--cCCcHHHHHHHHHHHhc--CCCeEEEEC--CCcHHHHHHHHHHHcCCCEEE
Confidence 444444444555567899999999975 35667777777777765 778899985 799999999999999999999
Q ss_pred EeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHHHHHHh-----ccc-ccchhhHHHHHHHHHHHhhhhhccc
Q 020509 172 LLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYANLV-----AGN-NGDVVWCNEIFEASLTAQKSRASCL 244 (325)
Q Consensus 172 vlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~~~~-----~Ga-sG~vr~~~eI~~qe~~~q~~~~~~~ 244 (325)
+|.... ...+..+++.+| +|+.++.. |....+..+.+.+.. ... +-.....+..++.|+.+|+.+
T Consensus 94 v~p~~~---~~~k~~~~~~~GA~V~~~~~~-~~~~~~~a~~~~~~~~~~~~~~~~n~~~~~g~~t~~~Ei~~q~~~---- 165 (311)
T 1ve5_A 94 VMPEDA---SPYKKACARAYGAEVVDRGVT-AKNREEVARALQEETGYALIHPFDDPLVIAGQGTAGLELLAQAGR---- 165 (311)
T ss_dssp ECCCC-----CCHHHHHHHTTCEEECTTCC-TTTHHHHHHHHHHHHCCEECCSSSSHHHHHHHHHHHHHHHHHHHH----
T ss_pred EECCCC---CHHHHHHHHHcCCEEEEECCC-HHHHHHHHHHHHHhcCcEecCCCCCcchhhhccHHHHHHHHHHHh----
Confidence 997653 345888999999 99988765 333332222222211 000 111122344455555545422
Q ss_pred cccchhhhhhccCCcEEEEeCCCcchhhhhhhcc
Q 020509 245 GQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLIP 278 (325)
Q Consensus 245 ~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi~ 278 (325)
....++.+++..|+|++..|+.-+++
T Consensus 166 --------~~~~~d~vvvpvG~Gg~~~Gi~~~~k 191 (311)
T 1ve5_A 166 --------MGVFPGAVLAPVGGGGLLAGLATAVK 191 (311)
T ss_dssp --------HTCCCSEEEEECSSSHHHHHHHHHHH
T ss_pred --------cCCCCCEEEEccCchHHHHHHHHHHH
Confidence 12345666666666777777665543
No 34
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=99.57 E-value=5.5e-14 Score=133.85 Aligned_cols=102 Identities=13% Similarity=0.102 Sum_probs=84.4
Q ss_pred CcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCC-----CCeEEEeCcccchHHHHHHHHHHHhCC
Q 020509 93 CPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHI-----VTDLVTCGGCQSAHATAVAVSCAERGL 167 (325)
Q Consensus 93 tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G-----~~~LVT~GG~QSNH~~AtAaaAa~lGL 167 (325)
||++..++|++..|.+||+|+|+++++ |--|.|-..+.|.+|.++| .++||+..++ ||+.|+|++|+++|+
T Consensus 36 TPLv~~~~Ls~~~G~~IylK~E~lnpt--GSfK~RgA~~~i~~a~~~g~l~~g~~~Vv~aSsG--N~g~alA~~aa~~G~ 111 (344)
T 3vc3_A 36 TPLVYLNKVTEGCGAYVAVKQEMMQPT--ASIADRPAYAMITDAEEKNLITPGKTTLIEPTSG--NMGISMAFMAAMKGY 111 (344)
T ss_dssp CCEEECCSTTTTCCSEEEEEEGGGSTT--SBTTHHHHHHHHHHHHHTTCCCTTTCEEEEECSS--HHHHHHHHHHHHHTC
T ss_pred CceEECcccchhhCCEEEEEecCCCCC--CCcHHHHHHHHHHHHHHcCCCCCCCCEEEEeCCc--HHHHHHHHHHHHcCC
Confidence 666666677777789999999999984 6789999999999998876 4688887665 699999999999999
Q ss_pred eEEEEeccccCCccchhhHHHHhCC-eEEEECCCC
Q 020509 168 KSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTH 201 (325)
Q Consensus 168 kcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~ 201 (325)
+|++||... .+..+...++.+| +|+.++...
T Consensus 112 ~~~IvmP~~---~~~~k~~~~~~~GA~Vv~v~~~~ 143 (344)
T 3vc3_A 112 KMVLTMPSY---TSLERRVTMRAFGAELILTDPAK 143 (344)
T ss_dssp EEEEEEETT---SCHHHHHHHHHTTCEEEEECGGG
T ss_pred cEEEEECCC---ChHHHHHHHHHcCCEEEEECCCC
Confidence 999999643 3445677889999 999997643
No 35
>3iau_A Threonine deaminase; pyridoxal phosphate, amino-acid biosynthesis, defensive PROT jasmonic acid pathway, jasmonic acid,structural genomics; HET: LLP 15P; 2.35A {Solanum lycopersicum}
Probab=99.53 E-value=5e-15 Score=141.52 Aligned_cols=100 Identities=13% Similarity=0.150 Sum_probs=76.1
Q ss_pred CCCcCccCCCCccCCCCeEEEEecCCCCCC-----CCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHh
Q 020509 91 NTCPFLGDDMIMRDEDRCFYVVRDDLLHPL-----VNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAER 165 (325)
Q Consensus 91 ~~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~-----lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~l 165 (325)
.+||++..++|++..|.+||+||||+++++ .++||++||+. +.+.++||++++ +||++|+|++|+++
T Consensus 59 ~~TPL~~l~~l~~~~g~~i~~K~E~~~ptgSfKdRga~~~i~~l~~------~~~~~~vv~ass--GN~g~a~A~aa~~~ 130 (366)
T 3iau_A 59 IESPLELAEKLSDRLGVNFYIKREDKQRVFSFKLRGAYNMMSNLSR------EELDKGVITASA--GNHAQGVALAGQRL 130 (366)
T ss_dssp CCCCEEECHHHHHHHTSEEEEEEGGGSTTSBTTHHHHHHHHHTSCH------HHHHHCEEEECS--SHHHHHHHHHHHHT
T ss_pred CCCCcEEhhhhhHhhCCEEEEEecCCCCCcchHHHHHHHHHHHHHH------hCCCCEEEEeCC--CHHHHHHHHHHHHh
Confidence 466777666677777889999999999753 24556555532 223467999877 89999999999999
Q ss_pred CCeEEEEeccccCCccchhhHHHHhCC-eEEEECCCCc
Q 020509 166 GLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHY 202 (325)
Q Consensus 166 GLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y 202 (325)
|++|+++|.... ...+...++.+| +|+.++. +|
T Consensus 131 G~~~~iv~P~~~---~~~k~~~~~~~GA~V~~v~~-~~ 164 (366)
T 3iau_A 131 NCVAKIVMPTTT---PQIKIDAVRALGGDVVLYGK-TF 164 (366)
T ss_dssp TCCEEEEECTTC---CHHHHHHHHHTTCEEEECCS-SH
T ss_pred CCceEEEeCCCC---CHHHHHHHHHCCCeEEEECc-CH
Confidence 999999996532 345667788999 9999984 44
No 36
>3ss7_X D-serine dehydratase; type II fold, ALFA,beta-elimination, P 5'-phosphate, lyase; HET: PLP; 1.55A {Escherichia coli} PDB: 3ss9_X* 3r0x_A* 3r0z_A
Probab=99.45 E-value=5.6e-13 Score=131.13 Aligned_cols=156 Identities=11% Similarity=0.046 Sum_probs=105.9
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHH-----hhhCCC---------------------CeEEEeCcccchHHHHHH
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPL-----LEDHIV---------------------TDLVTCGGCQSAHATAVA 159 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~d-----A~~~G~---------------------~~LVT~GG~QSNH~~AtA 159 (325)
|.+||+|+|++++ ..|..|.|...+.+.. |++.|. .+||+.. ..||++|+|
T Consensus 100 ~~~v~lK~E~~~p-~tGSfK~Rga~~~i~~l~~~~a~~~G~l~~g~~~~~l~~~~~r~~~~~~~vv~aS--sGNhg~avA 176 (442)
T 3ss7_X 100 SGQLLLKKDSHLP-ISGSIKARGGIYEVLAHAEKLALEAGLLTLDDDYSKLLSPEFKQFFSQYSIAVGS--TGNLGLSIG 176 (442)
T ss_dssp CSEEEEEEGGGCT-TTSBTHHHHHHHHHHHHHHHHHHHTTSCCTTSCGGGGGSHHHHHHHHTSEEEEEC--SSHHHHHHH
T ss_pred CCeEEEeecCCCC-CCCCcHHHHHHHHHHHHhHHHHHHcCCCCCCcchhhhhhhhhhhhccCcEEEEEC--CCHHHHHHH
Confidence 4799999999986 3489999999998875 788886 3666643 358999999
Q ss_pred HHHHHhCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCCCccchHHHHHH--HHHH-----hcccc--cchhhHHHH
Q 020509 160 VSCAERGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKS--YANL-----VAGNN--GDVVWCNEI 229 (325)
Q Consensus 160 aaAa~lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~--~~~~-----~~Gas--G~vr~~~eI 229 (325)
++|+++|++|+++|... ....++..++.+| +|+.++.+ | .+++..+ +.+. +.... -.+...+..
T Consensus 177 ~~aa~~G~~~~Ivmp~~---~~~~k~~~~r~~GA~Vv~v~~~-~--~~a~~~a~~~a~~~~~~~~i~~~n~~~~~~G~~t 250 (442)
T 3ss7_X 177 IMSARIGFKVTVHMSAD---ARAWKKAKLRSHGVTVVEYEQD-Y--GVAVEEGRKAAQSDPNCFFIDDENSRTLFLGYSV 250 (442)
T ss_dssp HHHHHHTCEEEEEEETT---SCHHHHHHHHHTTCEEEEESSC-H--HHHHHHHHHHHHTCTTEEECCTTTCHHHHHHHHH
T ss_pred HHHHHhCCcEEEEECCC---CCHHHHHHHHHCCCEEEEECCC-H--HHHHHHHHHHHHhCCCceeCCCCChHHHHHHHHH
Confidence 99999999999999754 3446888899999 99999863 3 2332222 1110 01111 124455677
Q ss_pred HHHHHHHhhhhhccccccchhhhh-hccCCcEEEEeCCCcchhhhhhhcc
Q 020509 230 FEASLTAQKSRASCLGQMDAHKGI-DNCRKKVLIVNEGAGDAVALLVLIP 278 (325)
Q Consensus 230 ~~qe~~~q~~~~~~~~~~d~~~~l-~~~g~~~y~ip~GGSnaiG~lGyi~ 278 (325)
++.|+.+|+.+. -..+ .+.|+.+++..|||++..|+.-++.
T Consensus 251 ~g~Ei~eQl~~~--------g~~vD~~~Pd~VvvpvG~GG~~aGi~~~lk 292 (442)
T 3ss7_X 251 AGQRLKAQFAQQ--------GRIVDADNPLFVYLPCGVGGGPGGVAFGLK 292 (442)
T ss_dssp HHHHHHHHHHHH--------TCCCBTTBCEEEEEECSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh--------cCcccccCCCEEEEEeCCchHHHHHHHHHH
Confidence 777777776430 0011 2456677777778877777655543
No 37
>1tdj_A Biosynthetic threonine deaminase; allostery, cooperative, tetramer, regulation, pyridoxal PHOS isoleucine biosynthesis; HET: PLP; 2.80A {Escherichia coli} SCOP: c.79.1.1 d.58.18.2 d.58.18.2
Probab=99.30 E-value=4.3e-12 Score=128.14 Aligned_cols=101 Identities=20% Similarity=0.197 Sum_probs=79.1
Q ss_pred CCcCccCCCCccCCCCeEEEEecCCCCCCCCChhHhhHHhhHHHhh-hCCCCeEEEeCcccchHHHHHHHHHHHhCCeEE
Q 020509 92 TCPFLGDDMIMRDEDRCFYVVRDDLLHPLVNGNKARKMDALLPLLE-DHIVTDLVTCGGCQSAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 92 ~tp~l~~~~Ls~~~G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~-~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcv 170 (325)
+||+...++||+..|.+||+||||++++ |.-|.|...+.+..+. +.+.++||+.++ +||+.|+|++|+++|++|+
T Consensus 31 ~TPL~~l~~Ls~~~g~~V~lK~E~lqPt--gSfKdRgA~n~i~~l~~~~~~~gVV~aSs--GNhg~avA~aa~~lGi~~~ 106 (514)
T 1tdj_A 31 VTPLQKMEKLSSRLDNVILVKREDRQPV--HSFKLRGAYAMMAGLTEEQKAHGVITASA--GNHAQGVAFSSARLGVKAL 106 (514)
T ss_dssp CCCEEECHHHHHHTTSEEEEECGGGSTT--SSSTHHHHHHHHHTTTTSSCSSSCEEEEC--SSSHHHHHHHHHHTTCCEE
T ss_pred CCCcEEchhhHHhhCCeEEEEECCCCCc--ccHHHHHHHHHHHHHHHhcCCCEEEEECC--cHHHHHHHHHHHHcCCcEE
Confidence 3444444455666688999999999753 5688888888887764 345678998766 8999999999999999999
Q ss_pred EEeccccCCccchhhHHHHhCC-eEEEECC
Q 020509 171 LLLRGEQPQILTGYNLISTIYG-KVTYVPR 199 (325)
Q Consensus 171 lvlrge~~~~~tGN~ll~~LlG-~V~~V~r 199 (325)
++|.... +..++..++.+| +|+.++.
T Consensus 107 IvmP~~~---p~~Kv~~~r~~GAeVvlv~~ 133 (514)
T 1tdj_A 107 IVMPTAT---ADIKVDAVRGFGGEVLLHGA 133 (514)
T ss_dssp EECCSSC---CHHHHHHHHHHSCEEECCCS
T ss_pred EEECCCC---CHHHHHHHHHCCCEEEEECC
Confidence 9997643 345677788999 9999875
No 38
>1e5x_A Threonine synthase; threonine biosynthesis, PLP enzyme, S-adenosyl-methionine, allostery; 2.25A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 2c2b_A* 2c2g_A*
Probab=99.29 E-value=4e-11 Score=119.48 Aligned_cols=103 Identities=15% Similarity=0.177 Sum_probs=79.0
Q ss_pred CCcCccCCCCccC-CC-CeEEEEecCCCCCCCCChhHhhHHhhHHHhhh-----CCCCeEEEeCcccchHHHHHHHHHHH
Q 020509 92 TCPFLGDDMIMRD-ED-RCFYVVRDDLLHPLVNGNKARKMDALLPLLED-----HIVTDLVTCGGCQSAHATAVAVSCAE 164 (325)
Q Consensus 92 ~tp~l~~~~Ls~~-~G-~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~-----~G~~~LVT~GG~QSNH~~AtAaaAa~ 164 (325)
.||++..++|++. .| .+||+|+|+++++ |..|.|.+.+.+..+.. .|.++||+ +..+||+.|+|++|++
T Consensus 130 ~TPLv~l~~L~~~~lg~~~l~~K~E~~nPT--GSFKDRga~~~~~~l~~~~~~~~g~~~Vv~--aSsGNtG~AlA~~a~~ 205 (486)
T 1e5x_A 130 NSNLFWAERFGKQFLGMNDLWVKHCGISHT--GSFKDLGMTVLVSQVNRLRKMKRPVVGVGC--ASTGDTSAALSAYCAS 205 (486)
T ss_dssp CCCEEECHHHHHHHHCCSSEEEEETTSSTT--SBTTHHHHHHHHHHHHHHHHTTCCCCEEEE--CCCSHHHHHHHHHHHH
T ss_pred CCCcEECcccchhhcCCCcEEEeeccCCCc--cCHHHHHHHHHHHHHHHHHHcCCCCeEEEE--cCCCHHHHHHHHHHHH
Confidence 5666666666665 55 4899999999874 78888877666655433 35788876 4688999999999999
Q ss_pred hCCeEEEEeccccCCccchhhHHHHhCC-eEEEECCC
Q 020509 165 RGLKSHLLLRGEQPQILTGYNLISTIYG-KVTYVPRT 200 (325)
Q Consensus 165 lGLkcvlvlrge~~~~~tGN~ll~~LlG-~V~~V~r~ 200 (325)
+|++|++++.... ....+...++.+| +|+.|+..
T Consensus 206 ~Gi~~~I~~P~~~--~s~~k~~~~~~~GA~vi~v~g~ 240 (486)
T 1e5x_A 206 AGIPSIVFLPANK--ISMAQLVQPIANGAFVLSIDTD 240 (486)
T ss_dssp HTCCEEEEEEGGG--CCHHHHHHHHHTTCEEEEEESC
T ss_pred cCCeEEEEECCCC--CCHHHHHHHHhCCCEEEEECCC
Confidence 9999999996531 2346777889999 99999864
No 39
>1vb3_A Threonine synthase; PLP-dependent enzyme, lyase; HET: KPA; 2.20A {Escherichia coli} SCOP: c.79.1.1
Probab=99.16 E-value=4.5e-11 Score=117.03 Aligned_cols=153 Identities=12% Similarity=0.033 Sum_probs=97.7
Q ss_pred eEEEEecCCCCCCCCChhHhhHHhh---HHHhhhCCCCeEEEeCcccchHHHHHH-HHHHHhCCeEEEEeccccCCccch
Q 020509 108 CFYVVRDDLLHPLVNGNKARKMDAL---LPLLEDHIVTDLVTCGGCQSAHATAVA-VSCAERGLKSHLLLRGEQPQILTG 183 (325)
Q Consensus 108 ~l~IKRDDL~h~~lgGNK~RKLeyl---L~dA~~~G~~~LVT~GG~QSNH~~AtA-aaAa~lGLkcvlvlrge~~~~~tG 183 (325)
+||+ +||+.++ .|.+|.|.+.++ |.+|++.+.++||+. ...||+.|+| ++|+++|++|+++|.... ....
T Consensus 92 ~i~~-~E~~~~p-TgSfKdr~a~~l~~~l~~a~~~~~~~Iv~a--tsGNtG~A~A~~~a~~~G~~~~I~~P~~~--~s~~ 165 (428)
T 1vb3_A 92 DVGC-LELFHGP-TLAFKDFGGRFMAQMLTHIAGDKPVTILTA--TSGDTGAAVAHAFYGLPNVKVVILYPRGK--ISPL 165 (428)
T ss_dssp TEEE-EECCCST-TSBTHHHHHHHHHHHHHHHTTTCCEEEEEE--CSSSHHHHHHHHTTTCTTEEEEEEEETTC--SCHH
T ss_pred CeEE-eeccCCC-cccHHHHHHHHHHHHHHHHHhcCCCEEEec--CCchHHHHHHHHHhhhcCCeEEEEECCCC--CCHH
Confidence 6999 9998545 499999999987 455644456677764 4567999999 699999999999996532 2345
Q ss_pred hhHHHHhCC-eE--EEECCCCccchHHHHHHHHHH-----h-cccc----cchhhHHHHHHHHHHHhhhhhccccccchh
Q 020509 184 YNLISTIYG-KV--TYVPRTHYAHRIEMLKSYANL-----V-AGNN----GDVVWCNEIFEASLTAQKSRASCLGQMDAH 250 (325)
Q Consensus 184 N~ll~~LlG-~V--~~V~r~~y~~kda~~e~~~~~-----~-~Gas----G~vr~~~eI~~qe~~~q~~~~~~~~~~d~~ 250 (325)
+...|+.+| +| +.++.+.....+.+.+.+.++ . .... -....+|..++.|+.+|+..
T Consensus 166 k~~~m~~~GA~V~~v~v~g~~d~~~~~~~~~~~d~~~~~~~~~~~~n~~n~~~~~gq~t~~~Ei~~ql~~---------- 235 (428)
T 1vb3_A 166 QEKLFCTLGGNIETVAIDGDFDACQALVKQAFDDEELKVALGLNSANSINISRLLAQICYYFEAVAQLPQ---------- 235 (428)
T ss_dssp HHHHHHSCCTTEEEEEEESCHHHHHHHHHHGGGCHHHHHHHTEECCSTTSHHHHHHTTHHHHHHHTTSCT----------
T ss_pred HHHHHHhcCCeEEEEEeCCCHHHHHHHHHHHHhchhhhhhcCeeeCCCCCHHHHHHHHHHHHHHHHHccc----------
Confidence 666788899 88 555543222222233333221 1 1111 12234567777777666532
Q ss_pred hhhhccCCcEEEEeCCCcchhhhhhhcc
Q 020509 251 KGIDNCRKKVLIVNEGAGDAVALLVLIP 278 (325)
Q Consensus 251 ~~l~~~g~~~y~ip~GGSnaiG~lGyi~ 278 (325)
.+..++.+++..|||+|..|++-+.+
T Consensus 236 --~g~~~d~vvvpvG~GG~i~G~~~a~~ 261 (428)
T 1vb3_A 236 --ETRNQLVVSVPSGNFGDLTAGLLAKS 261 (428)
T ss_dssp --TTTTSEEEEEECSSCHHHHHHHHHHH
T ss_pred --ccCCCCEEEEeCCchHHHHHHHHHHH
Confidence 12345666777777888888765543
No 40
>1kl7_A Threonine synthase; threonine synthesis, pyridoxal 5-phosphate, beta-family, MON lyase; HET: PLP; 2.70A {Saccharomyces cerevisiae} SCOP: c.79.1.1
Probab=96.72 E-value=0.0082 Score=60.60 Aligned_cols=65 Identities=8% Similarity=0.014 Sum_probs=45.8
Q ss_pred CeEEEEecCCCCCCCCChhHhhHHhh---HHHhh-hCC---------CCeEEEeCcccchHHHHHHHHH--HHhCCeEEE
Q 020509 107 RCFYVVRDDLLHPLVNGNKARKMDAL---LPLLE-DHI---------VTDLVTCGGCQSAHATAVAVSC--AERGLKSHL 171 (325)
Q Consensus 107 ~~l~IKRDDL~h~~lgGNK~RKLeyl---L~dA~-~~G---------~~~LVT~GG~QSNH~~AtAaaA--a~lGLkcvl 171 (325)
.+||+|-|-++++ |--|-|-+.++ +.+++ +.| ..+||+. .--||+.| |++| ++.|++|++
T Consensus 108 ~~l~~K~e~~nPT--gSFKDrga~~~~~~~~~a~~~~g~~~~~~~~~~~~Iv~A--TSGNtG~A-A~~a~a~~~Gi~~~I 182 (514)
T 1kl7_A 108 ENLHILELFHGPT--YAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGA--TSGDTGSA-AIYGLRGKKDVSVFI 182 (514)
T ss_dssp SCEEEEECCCSTT--SBTHHHHHHHHHHHHHHHHHHHHTTSCSSSCCCEEEEEE--CSSSHHHH-HHHHHTTCTTEEEEE
T ss_pred cchhhhhhccCCC--CcHHHHHHHHHHHHHHHHHHhcCCccccccCCCCEEEEC--CCCcHHHH-HHHHHHhhcCCeEEE
Confidence 3799998887764 67888888777 44543 334 3455542 23479999 6666 899999999
Q ss_pred Eeccc
Q 020509 172 LLRGE 176 (325)
Q Consensus 172 vlrge 176 (325)
++...
T Consensus 183 ~~P~~ 187 (514)
T 1kl7_A 183 LYPTG 187 (514)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 99653
No 41
>4f4f_A Threonine synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.90A {Brucella melitensis BV}
Probab=96.72 E-value=0.012 Score=58.78 Aligned_cols=82 Identities=12% Similarity=-0.006 Sum_probs=55.6
Q ss_pred eEEEEecCCCCCCCCChhHhhHHhh---HHHhh-hCCCC-eEEEeCcccchHHHHH-HHHHHHhCCeEEEEeccccCCcc
Q 020509 108 CFYVVRDDLLHPLVNGNKARKMDAL---LPLLE-DHIVT-DLVTCGGCQSAHATAV-AVSCAERGLKSHLLLRGEQPQIL 181 (325)
Q Consensus 108 ~l~IKRDDL~h~~lgGNK~RKLeyl---L~dA~-~~G~~-~LVT~GG~QSNH~~At-AaaAa~lGLkcvlvlrge~~~~~ 181 (325)
++|+|.+.++++ |--|-|-+.++ +..++ +.|.+ +||+.-+ -||+.|. |++|++.|+++++++.... ..
T Consensus 102 ~~~~kee~~~PT--gSFKDRga~~~~~~l~~a~~~~g~~~~Vv~ASS--GNtG~aa~aa~a~~~Gi~~~I~~P~~~--~s 175 (468)
T 4f4f_A 102 NEFVLELFHGPT--LAFKDVAMQLLARMMDYVLAQRGERATIVGATS--GDTGGAAIEAFGGRDNTDIFILFPNGR--VS 175 (468)
T ss_dssp TEEEEECCCSTT--SBTHHHHHHHHHHHHHHHHHHTTCCEEEEEECS--SHHHHHHHHHHTTCSSEEEEEEEETTC--SC
T ss_pred CeehHHhccCCc--ccHHHHHHHHHHHHHHHHHHhcCCCcEEEEECC--chHHHHHHHHHHhccCCcEEEEeCCCC--CC
Confidence 699999988764 67888888877 66663 56765 5665322 4799555 6668899999999996531 12
Q ss_pred chhhHHHHhCC--eEE
Q 020509 182 TGYNLISTIYG--KVT 195 (325)
Q Consensus 182 tGN~ll~~LlG--~V~ 195 (325)
......++.+| +|+
T Consensus 176 ~~k~~~~~~~gganV~ 191 (468)
T 4f4f_A 176 PVQQRQMTSSGFSNVH 191 (468)
T ss_dssp HHHHHHHHCSCCTTEE
T ss_pred HHHHHHHHhcCCCeEE
Confidence 22334566674 663
No 42
>3v7n_A Threonine synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, lyase; 1.40A {Burkholderia thailandensis}
Probab=95.80 E-value=0.056 Score=54.39 Aligned_cols=79 Identities=10% Similarity=-0.019 Sum_probs=54.2
Q ss_pred eEEEEecCCCCCCCCChhHhhHHhh---HHHhh-hCCCCe-EEEeCcccchHHHHHHHHHH-HhCCeEEEEeccccCCcc
Q 020509 108 CFYVVRDDLLHPLVNGNKARKMDAL---LPLLE-DHIVTD-LVTCGGCQSAHATAVAVSCA-ERGLKSHLLLRGEQPQIL 181 (325)
Q Consensus 108 ~l~IKRDDL~h~~lgGNK~RKLeyl---L~dA~-~~G~~~-LVT~GG~QSNH~~AtAaaAa-~lGLkcvlvlrge~~~~~ 181 (325)
++|+|-+-.++ .|--|-|-+.++ +..++ +.|.+. ||+. .--||+.|.|++++ +.|++|++++.... ..
T Consensus 115 ~l~vkee~~~P--TgSFKDRga~~~~~ll~~a~~~~g~~~~Vv~A--SSGNtG~Aaa~a~~~~~Gi~~~I~~P~~~--~s 188 (487)
T 3v7n_A 115 PVSLLELSNGP--TLAFKDMAMQLLGNLFEYTLAKHGETLNILGA--TSGDTGSAAEYAMRGKEGVRVFMLSPHKK--MS 188 (487)
T ss_dssp EEEEEECCCST--TSBTHHHHHHHHHHHHHHHHHTTTCCEEEEEE--CSSHHHHHHHHHHTTCTTEEEEEEEETTC--SC
T ss_pred ceeHHhhccCC--cCcHHHHHHHHHHHHHHHHHHhcCCCcEEEEe--CChHHHHHHHHHHHhccCCeEEEEECCCC--CC
Confidence 49999555444 478899998887 77774 567654 5553 22489999776665 89999999996431 12
Q ss_pred chhhHHHHhCC
Q 020509 182 TGYNLISTIYG 192 (325)
Q Consensus 182 tGN~ll~~LlG 192 (325)
......++.+|
T Consensus 189 ~~k~~qm~~~G 199 (487)
T 3v7n_A 189 AFQTAQMYSLQ 199 (487)
T ss_dssp HHHHHHHHTCC
T ss_pred HHHHHHHHhcC
Confidence 23455677788
No 43
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=84.99 E-value=7.4 Score=34.47 Aligned_cols=65 Identities=11% Similarity=-0.100 Sum_probs=40.3
Q ss_pred CeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 107 RCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 107 ~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
+.||-=|.. +.+ -.++...++-.-|+..+++.--+|||-|+.. -+.|.+..|.+.|-+++.++..
T Consensus 26 IaV~Gss~~-~~~-~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~G--iM~aa~~gAl~~GG~~iGVlP~ 90 (195)
T 1rcu_A 26 VVVVGYSGP-VNK-SPVSELRDICLELGRTLAKKGYLVFNGGRDG--VMELVSQGVREAGGTVVGILPD 90 (195)
T ss_dssp EEEEECCSC-TTS-TTTGGGHHHHHHHHHHHHHTTCEEEECCSSH--HHHHHHHHHHHTTCCEEEEEST
T ss_pred EEEEecCCC-CCc-cccHHHHHHHHHHHHHHHHCCCEEEeCCHHH--HHHHHHHHHHHcCCcEEEEeCC
Confidence 456665443 222 1223455555556665554445678854444 7788888888899999999854
No 44
>1o98_A 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; isomerase, alpha/beta-type structure; HET: 2PG; 1.4A {Bacillus stearothermophilus} SCOP: c.105.1.1 c.76.1.3 PDB: 1ejj_A* 1eqj_A* 1o99_A* 2ify_A
Probab=82.35 E-value=2.2 Score=43.28 Aligned_cols=104 Identities=24% Similarity=0.289 Sum_probs=65.4
Q ss_pred hHHhhHHHhhhCCCC----eEEEeCcccc--hHHHHHHHHHHHhCCe---EEEEeccccCCccchhhHHHHh------CC
Q 020509 128 KMDALLPLLEDHIVT----DLVTCGGCQS--AHATAVAVSCAERGLK---SHLLLRGEQPQILTGYNLISTI------YG 192 (325)
Q Consensus 128 KLeylL~dA~~~G~~----~LVT~GG~QS--NH~~AtAaaAa~lGLk---cvlvlrge~~~~~tGN~ll~~L------lG 192 (325)
-|..++..+++.|.+ .|+|-||++| +|+.|+..+|++.|++ .|+++-|.+....++.-++..+ .|
T Consensus 96 ~~~~~~~~~~~~~~~~H~~gl~sdggvhsh~~hl~~l~~~a~~~g~~~v~~H~~~dGrD~~p~s~~~~~~~~~~~~~~~~ 175 (511)
T 1o98_A 96 TFLAAMNHVKQHGTSLHLFGLLSDGGVHSHIHHLYALLRLAAKEGVKRVYIHGFLDGRDVGPQTAPQYIKELQEKIKEYG 175 (511)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCCEEEEEEECSSSSCTTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCeEEEEEeccCCCCccHHHHHHHHHHHHHHCCCCeEEEEEEccCCCCCCchHHHHHHHHHHHHHHhC
Confidence 355667777665543 3567899999 8999999999999995 5778877775544543322211 24
Q ss_pred --eEEEECCCCc-----cchHHHHHHHHHHhcccccchhhHHHHHH
Q 020509 193 --KVTYVPRTHY-----AHRIEMLKSYANLVAGNNGDVVWCNEIFE 231 (325)
Q Consensus 193 --~V~~V~r~~y-----~~kda~~e~~~~~~~GasG~vr~~~eI~~ 231 (325)
+|-.|.---| ...|.++.+|..++.|..-....+.+.++
T Consensus 176 ~~~ias~~GR~yamdrd~rw~rv~~ay~~~~~g~~~~~~~~~~~i~ 221 (511)
T 1o98_A 176 VGEIATLSGRYYSMDRDKRWDRVEKAYRAMVYGEGPTYRDPLECIE 221 (511)
T ss_dssp CCEEEEEEEHHHHTCCSCCHHHHHHHHHHHHHCCSCEESSHHHHHH
T ss_pred CEEEEEEeccceeecCccChHHHHHHHHHHHcCCCCCcCCHHHHHH
Confidence 6766532111 35677788888777665432233444443
No 45
>3igz_B Cofactor-independent phosphoglycerate mutase; glycolysis, cobalt, isomerase; HET: 3PG 2PG; 1.90A {Leishmania mexicana} PDB: 3igy_B* 3nvl_A
Probab=81.55 E-value=11 Score=38.68 Aligned_cols=92 Identities=16% Similarity=0.217 Sum_probs=59.5
Q ss_pred HHhhHHHhhhCCCC----eEEEeCcccc--hHHHHHHHHHHHhCCe---EEEEeccccCCccchhhHHHHh---------
Q 020509 129 MDALLPLLEDHIVT----DLVTCGGCQS--AHATAVAVSCAERGLK---SHLLLRGEQPQILTGYNLISTI--------- 190 (325)
Q Consensus 129 LeylL~dA~~~G~~----~LVT~GG~QS--NH~~AtAaaAa~lGLk---cvlvlrge~~~~~tGN~ll~~L--------- 190 (325)
|..++..+++.+.+ .|+|-||++| +|+.|+..+|++.|++ .|+++-|.+....++--++..+
T Consensus 110 l~~~~~~~~~~~~~lHl~GL~SdGGVHSh~~Hl~~l~~~a~~~g~~~v~vH~f~DGRD~~p~S~~~~~~~l~~~~~~~~~ 189 (561)
T 3igz_B 110 YRYLHGAFSKEGSTLHLIGLLSDGGVHSRDNQIYSIIEHAVKDGAKRIRVHALYDGRDVPDGSSFRFTDELEAVLAKVRQ 189 (561)
T ss_dssp HHHHHHHHTSTTCCEEEEEECSSCCSSCCHHHHHHHHHHHHHTTCCEEEEEEEECSSSSCTTTHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhcCCeEEEEEeccCCCccchHHHHHHHHHHHHHcCCCeEEEEEEccCCCCCcchHHHHHHHHHHHHHHHHh
Confidence 55566666655544 4667899988 6999999999999995 6677877665544543333222
Q ss_pred CC---eEEEECCCCc-------cchHHHHHHHHHHhcccc
Q 020509 191 YG---KVTYVPRTHY-------AHRIEMLKSYANLVAGNN 220 (325)
Q Consensus 191 lG---~V~~V~r~~y-------~~kda~~e~~~~~~~Gas 220 (325)
.| +|-.|.---| ...+.++.+|..++.|..
T Consensus 190 ~g~~g~iasv~GRyyvaMDRyd~rW~rv~~ay~a~v~g~g 229 (561)
T 3igz_B 190 NGCDAAIASGGGRMFVTMDRYDADWSIVERGWRAQVLGDA 229 (561)
T ss_dssp TTCEEEEEEEEETTTSSCCCTTSCHHHHHHHHHHHTTCCS
T ss_pred cCCCceEEEEeccchhhcCccCCCHHHHHHHHHHHhcCCC
Confidence 33 4555542233 234677888877776653
No 46
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=69.58 E-value=80 Score=30.19 Aligned_cols=152 Identities=11% Similarity=0.055 Sum_probs=91.7
Q ss_pred CCeEEEEec----CCCCCC-CCChhHhhHHhhHHHhhhCCCCeEEE---eCcccch--------HHHHHHHHHHHhCCeE
Q 020509 106 DRCFYVVRD----DLLHPL-VNGNKARKMDALLPLLEDHIVTDLVT---CGGCQSA--------HATAVAVSCAERGLKS 169 (325)
Q Consensus 106 G~~l~IKRD----DL~h~~-lgGNK~RKLeylL~dA~~~G~~~LVT---~GG~QSN--------H~~AtAaaAa~lGLkc 169 (325)
+.-+||.+| |-+..+ ++ +| -+.+-..+|++.|+|.|-. +|.-... -+..++..|++.||+.
T Consensus 87 ~~GLii~~E~~G~~~~~~gr~p-~~--l~~~sve~a~~~GADAVk~lv~~g~d~~~e~~~~q~~~l~rv~~ec~~~GiPl 163 (332)
T 3iv3_A 87 EAGLLLAYEKTGYDANTTSRLP-DC--LVDWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPF 163 (332)
T ss_dssp TCEEEEECBCCCCCTTSSCCCC-CB--CTTCCHHHHHHTTCSEEEEEEEECTTSCHHHHHHHHHHHHHHHHHHHHHTCCE
T ss_pred CCcEEEEeccCCCCcCCCCCCC-cc--ccccCHHHHHHcCCCEEEEEEEcCCCchHHHHHHHHHHHHHHHHHHHHcCCce
Confidence 678999995 222212 22 33 4567789999999987544 6654332 4677888999999999
Q ss_pred EE--EeccccCCccc--------hh-hH-HHHhC-----C-eEEEECCCC--------------ccchHHHHHHHHHHhc
Q 020509 170 HL--LLRGEQPQILT--------GY-NL-ISTIY-----G-KVTYVPRTH--------------YAHRIEMLKSYANLVA 217 (325)
Q Consensus 170 vl--vlrge~~~~~t--------GN-~l-l~~Ll-----G-~V~~V~r~~--------------y~~kda~~e~~~~~~~ 217 (325)
.+ +++........ +. +. .++.+ | +|.=++-.. |+..+ ..+.
T Consensus 164 llEil~y~~~~~~~~~~~~a~~~p~~V~~a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~e-a~~~------ 236 (332)
T 3iv3_A 164 FLEILTYDETISNNSSVEFAKVKVHKVNDAMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEE-AAQA------ 236 (332)
T ss_dssp EEEEEECBTTBSCTTSHHHHTTHHHHHHHHHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHH-HHHH------
T ss_pred EEEEeccCCCCCCCcchhhhccCHHHHHHHHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHH-HHHH------
Confidence 98 65543211111 11 11 13333 6 765554211 11111 1111
Q ss_pred ccccchhhHHHHHHHHHHHhhhhhccccccchhhhhhccCCcEEEEeCCCcchhhhhhhcccccccccccceEEeeeccc
Q 020509 218 GNNGDVVWCNEIFEASLTAQKSRASCLGQMDAHKGIDNCRKKVLIVNEGAGDAVALLVLIPGSFTWKKKGYKICCGCWYW 297 (325)
Q Consensus 218 GasG~vr~~~eI~~qe~~~q~~~~~~~~~~d~~~~l~~~g~~~y~ip~GGSnaiG~lGyi~~~~e~~~~~~~~~~~~~~~ 297 (325)
.+++.+....|+++-.||.+.--.+-.++.+.|--+.+--++||=-.|
T Consensus 237 --------------------------------f~~~~~a~~~P~v~lsgG~~~~~fl~~v~~A~~aGa~f~Gv~~GRnvw 284 (332)
T 3iv3_A 237 --------------------------------FREQEASTDLPYIYLSAGVSAELFQETLVFAHKAGAKFNGVLCGRATW 284 (332)
T ss_dssp --------------------------------HHHHHHTCSSCEEEECTTCCHHHHHHHHHHHHHHTCCCCEEEECHHHH
T ss_pred --------------------------------HHHHHhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCCcceEEeeHHHH
Confidence 123445667898888888887778888888877666667788887777
Q ss_pred cC
Q 020509 298 DN 299 (325)
Q Consensus 298 ~~ 299 (325)
..
T Consensus 285 q~ 286 (332)
T 3iv3_A 285 AG 286 (332)
T ss_dssp TT
T ss_pred Hh
Confidence 54
No 47
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=69.31 E-value=19 Score=31.74 Aligned_cols=59 Identities=12% Similarity=-0.066 Sum_probs=39.2
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEeccccCCccchhh
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQPQILTGYN 185 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~~~~~tGN~ 185 (325)
..+...-|+.++++.--+|||-||. .--+.|++-.|.+.|-+++.++....+.....|.
T Consensus 29 ~~~~A~~lg~~la~~g~~lv~GGG~-~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~ 87 (189)
T 3sbx_A 29 LLELAGAVGAAIAARGWTLVWGGGH-VSAMGAVSSAARAHGGWTVGVIPKMLVHRELADH 87 (189)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCBC-SHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCT
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCc-cCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCC
Confidence 4555566666655444456655444 4599999999999999999998654333344453
No 48
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=61.93 E-value=44 Score=29.61 Aligned_cols=58 Identities=16% Similarity=-0.005 Sum_probs=38.1
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEeccccCCccchh
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQPQILTGY 184 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~~~~~tGN 184 (325)
..+.-.-|+..+++.--+|||-||. .--+.|.+-.|.+.|-+++.++.....+...+|
T Consensus 38 ~~~~A~~lg~~La~~g~~lV~GGG~-~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~ 95 (199)
T 3qua_A 38 LLELAAEVGSSIAARGWTLVSGGGN-VSAMGAVAQAARAKGGHTVGVIPKALVHRELAD 95 (199)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCBC-SHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBC
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCc-cCHHHHHHHHHHHcCCcEEEEeCchhhhccccC
Confidence 4455555555555444456665543 458999999999999999999866433333344
No 49
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=61.07 E-value=20 Score=30.68 Aligned_cols=48 Identities=10% Similarity=-0.187 Sum_probs=32.6
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
.++.-.-|+..++..--+|||-||. --+.|.+..|.+.|-+++.++..
T Consensus 18 ~~~~A~~lg~~La~~g~~lV~Ggg~--GiM~aa~~gAl~~gG~tiGV~~~ 65 (171)
T 1weh_A 18 LYARWVRYGEVLAEEGFGLACGGYQ--GGMEALARGVKAKGGLVVGVTAP 65 (171)
T ss_dssp HHHHHHHHHHHHHHTTEEEEECCSS--THHHHHHHHHHHTTCCEEECCCG
T ss_pred HHHHHHHHHHHHHHCCCEEEeCChh--hHHHHHHHHHHHcCCcEEEEecc
Confidence 4445555555544433455555554 58999999999999999999754
No 50
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=51.22 E-value=71 Score=28.41 Aligned_cols=49 Identities=16% Similarity=0.014 Sum_probs=32.4
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
.++.-.-|+..++..--+|||.||. .--+-|.+..|...|-+++.|+..
T Consensus 30 y~~~A~~lg~~LA~~G~~vVsGGg~-~GiM~aa~~gAl~~GG~tiGVlP~ 78 (215)
T 2a33_A 30 YQDAAVDLGNELVSRNIDLVYGGGS-IGLMGLVSQAVHDGGRHVIGIIPK 78 (215)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCS-SHHHHHHHHHHHHTTCCEEEEEES
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCh-hhHhHHHHHHHHHcCCcEEEEcch
Confidence 3444455555544434456665553 338889999999999999999843
No 51
>3v8e_A Nicotinamidase; hydrolase; HET: JJJ; 2.71A {Saccharomyces cerevisiae} PDB: 2h0r_A
Probab=50.28 E-value=47 Score=29.01 Aligned_cols=44 Identities=32% Similarity=0.424 Sum_probs=34.3
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+.+| ++.|.++|+-+|-.-..=..+||.-|..+|++++++..
T Consensus 144 ~L~~~L---~~~gi~~l~i~G~~t~~CV~~Ta~~a~~~g~~v~v~~D 187 (216)
T 3v8e_A 144 DMNKYL---EKHHTDEVYIVGVALEYXVKATAISAAELGYKTTVLLD 187 (216)
T ss_dssp SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHH---HhCCCCEEEEEEeccccHHHHHHHHHHHCCCEEEEecc
Confidence 355544 45799999999887666677888889999999988854
No 52
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=47.95 E-value=20 Score=32.06 Aligned_cols=46 Identities=24% Similarity=0.014 Sum_probs=30.2
Q ss_pred hhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 127 RKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 127 RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.+.-.-|+..++..-=+|||-|| .--+.|.+..|...|-+++.++-
T Consensus 55 ~~~A~~lg~~La~~g~~lVsGGg--~GiM~aa~~gAl~~gG~~iGV~~ 100 (217)
T 1wek_A 55 YEAGYRLGRALAEAGFGVVTGGG--PGVMEAVNRGAYEAGGVSVGLNI 100 (217)
T ss_dssp HHHHHHHHHHHHHHTCEEEECSC--SHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCh--hhHHHHHHHHHHHcCCCEEEEee
Confidence 34444444444333345666555 45888999999999999999953
No 53
>3gbc_A Pyrazinamidase/nicotinamidas PNCA; nicotinamidase - pyrazinamidase, resistance to pyrazinamide, hydrolase; 2.20A {Mycobacterium tuberculosis} PDB: 3pl1_A
Probab=47.38 E-value=41 Score=28.63 Aligned_cols=44 Identities=16% Similarity=0.200 Sum_probs=33.3
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..| ++.|.++||-+|-.-..=..+||.-|..+|++++++..
T Consensus 115 ~L~~~L---~~~gi~~lvv~G~~t~~CV~~Ta~da~~~G~~v~v~~D 158 (186)
T 3gbc_A 115 PLLNWL---RQRGVDEVDVVGIATDHCVRQTAEDAVRNGLATRVLVD 158 (186)
T ss_dssp BHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHH---HhcCCCEEEEEEecccHHHHHHHHHHHHCCCeEEEEhh
Confidence 344444 45799999988877555567888888899999988754
No 54
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=42.95 E-value=86 Score=27.14 Aligned_cols=49 Identities=16% Similarity=0.064 Sum_probs=33.5
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
.++.-.-|+..++.---+|||-||. .--+.|.+..|.+.|-+++.++..
T Consensus 18 ~~~~A~~lg~~La~~g~~lV~GGg~-~GiM~aa~~gA~~~gG~~iGv~p~ 66 (191)
T 1t35_A 18 YKRKAAELGVYMAEQGIGLVYGGSR-VGLMGTIADAIMENGGTAIGVMPS 66 (191)
T ss_dssp HHHHHHHHHHHHHHTTCEEEECCCC-SHHHHHHHHHHHTTTCCEEEEEET
T ss_pred HHHHHHHHHHHHHHCCCEEEECCCc-ccHHHHHHHHHHHcCCeEEEEeCc
Confidence 4555555666554433455555543 348899999999999999999854
No 55
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=42.78 E-value=25 Score=32.07 Aligned_cols=30 Identities=20% Similarity=0.234 Sum_probs=25.5
Q ss_pred CeEEEeCcccchHHHHHHHHHHHhCCeEEEEe
Q 020509 142 TDLVTCGGCQSAHATAVAVSCAERGLKSHLLL 173 (325)
Q Consensus 142 ~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvl 173 (325)
++|+-.||.| ..+.++.+|+++|++++++=
T Consensus 2 K~I~ilGgg~--~g~~~~~~Ak~~G~~vv~vd 31 (363)
T 4ffl_A 2 KTICLVGGKL--QGFEAAYLSKKAGMKVVLVD 31 (363)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCEEEEEe
Confidence 4677788888 77888999999999998884
No 56
>1j2r_A Hypothetical isochorismatase family protein YECD; parallel beta-sheet 3-2-1-4-5-6, alpha-beta-alpha motif, TET structural genomics; 1.30A {Escherichia coli} SCOP: c.33.1.3
Probab=38.94 E-value=51 Score=27.89 Aligned_cols=60 Identities=15% Similarity=0.180 Sum_probs=40.2
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..+.-|+- ...+-|. .|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 106 ~~~vi~K~~---~saF~~t---~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~D 165 (199)
T 1j2r_A 106 SDIEIIKRQ---WGAFYGT---DLELQL---RRRGIDTIVLCGISTNIGVESTARNAWELGFNLVIAED 165 (199)
T ss_dssp TSEEEEESS---SSSSTTS---SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEeCCC---cCCcCCC---CHHHHH---HHCCCCEEEEEeeeccHHHHHHHHHHHHCCCEEEEehh
Confidence 345666753 2233332 355555 45799999998877555566888888899999888853
No 57
>1nf9_A Phenazine biosynthesis protein PHZD; isochorismatase, enzyme, phenazine pathway, hydrolase; HET: BOG; 1.50A {Pseudomonas aeruginosa} SCOP: c.33.1.3 PDB: 1nf8_A* 3r77_A*
Probab=35.34 E-value=61 Score=27.67 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=32.3
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..|. +.|.++||-+|-.-..=+.+||.-|..+|.+++++-.
T Consensus 132 ~L~~~L~---~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~D 175 (207)
T 1nf9_A 132 DLLQRMR---AAGRDQLVLCGVYAHVGVLISTVDAYSNDIQPFLVAD 175 (207)
T ss_dssp SHHHHHH---HTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHH---HcCCCEEEEEeeecChHHHHHHHHHHHCCCEEEEeCc
Confidence 3555553 5799999988766433466788888899999888753
No 58
>2wt9_A Nicotinamidase; hydrolase, pyrazinamidase; HET: GOL; 1.65A {Acinetobacter baumannii} PDB: 2wta_A*
Probab=35.29 E-value=59 Score=28.60 Aligned_cols=44 Identities=11% Similarity=0.210 Sum_probs=34.0
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..| ++.|.++||-+|-.-..=+.+||.-|..+|++++++-.
T Consensus 157 ~L~~~L---~~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~D 200 (235)
T 2wt9_A 157 GLTGYL---KERGIDTVYVVGIATDFCVAWTALDAVKQGFKTLVIED 200 (235)
T ss_dssp SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHH---HHCCCCEEEEEEeCccHHHHHHHHHHHhCCCEEEEech
Confidence 355555 45799999999877655567888888999999888753
No 59
>1x9g_A Putative MAR1; structural genomics, protein structure initiative, SGPP, PSI structural genomics of pathogenic protozoa consortium; 2.41A {Leishmania donovani} SCOP: c.33.1.3 PDB: 1xn4_A
Probab=35.24 E-value=48 Score=28.72 Aligned_cols=41 Identities=15% Similarity=0.007 Sum_probs=31.1
Q ss_pred HHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 133 LPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 133 L~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
|.+.++ |.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 100 L~~~L~-gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~Vv~D 140 (200)
T 1x9g_A 100 VEELLE-DVDNAVVFGIEGHACILQTVADLLDMNKRVFLPKD 140 (200)
T ss_dssp HHHTTT-TCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEGG
T ss_pred HHHHhC-CCCEEEEEEEecCcHHHHHHHHHHhCCCEEEEeCC
Confidence 334445 99999988877655567888888899999888753
No 60
>1im5_A 180AA long hypothetical pyrazinamidase/nicotinamidase; pyrazinamide, tuberculosis, PZA resistance, drug resistance, metal ION catalysis; 1.65A {Pyrococcus horikoshii} SCOP: c.33.1.3 PDB: 1ilw_A
Probab=34.84 E-value=66 Score=26.77 Aligned_cols=65 Identities=15% Similarity=0.200 Sum_probs=40.0
Q ss_pred CeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 107 RCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 107 ~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
..+.-|+-|--...+|+=.--.|+..| ++.|.++||-+|-.-..=..+||.-|...|.+++++..
T Consensus 89 ~~vi~K~~~~~~~~~saF~~t~L~~~L---~~~gi~~lvi~G~~t~~CV~~Ta~da~~~Gy~v~vv~D 153 (180)
T 1im5_A 89 AVIISKATEPDKEAYSGFEGTDLAKIL---RGNGVKRVYICGVATEYCVRATALDALKHGFEVYLLRD 153 (180)
T ss_dssp CEEEEECCSTTCCCCSTTTTSSHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cEEEECCCCCCCccccCccCCCHHHHH---HhCCCCEEEEEEeecCHHHHHHHHHHHHCCCEEEEehh
Confidence 356777652111112221112355554 45799999988877555566788888899999888754
No 61
>3r2j_A Alpha/beta-hydrolase-like protein; nicotinamidase, cytoplasmic; 2.68A {Leishmania infantum}
Probab=34.64 E-value=1e+02 Score=27.23 Aligned_cols=66 Identities=12% Similarity=0.039 Sum_probs=41.9
Q ss_pred CCeEEEEecCC---CCCCCCCh--hHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDL---LHPLVNGN--KARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL---~h~~lgGN--K~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..+.-|+.+- ....+-+| .--.|+.+|. +.|.++||-+|-.-..=..+||.-|..+|.+++++..
T Consensus 120 ~d~vi~K~~~~~~~~~SaF~~~~~~~t~L~~~L~---~~gi~~lvv~G~~T~~CV~~Ta~dA~~~Gy~V~Vv~D 190 (227)
T 3r2j_A 120 INAVIRKGVTQQADSYSAFVEDNGVSTGLAGLLH---SIGARRVFVCGVAYDFCVFFTAMDARKNGFSVVLLED 190 (227)
T ss_dssp CCEEEEESCSTTCCCSSSSBCTTSCBCSHHHHHH---HHTCCEEEEEESCTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEECCCcccccccchhccCCCCCCcHHHHHH---HcCCCEEEEEEeccchHHHHHHHHHHHCCCEEEEEhH
Confidence 45678887432 11223111 1123555554 4699999998877544456888888899999988754
No 62
>3o94_A Nicotinamidase; hydrolase; 1.60A {Streptococcus pneumoniae} PDB: 3o90_A 3o91_A* 3o92_A* 3o93_A* 3s2s_A
Probab=33.20 E-value=89 Score=27.40 Aligned_cols=44 Identities=14% Similarity=0.213 Sum_probs=32.8
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++..
T Consensus 133 ~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~~a~~~Gy~v~vv~D 176 (211)
T 3o94_A 133 DLDIRL---RERRVSTVILTGVLTDISVLHTAIDAYNLGYDIEIVKP 176 (211)
T ss_dssp SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHH---HhCCCCeEEEEeeccChHHHHHHHHHHHCCCEEEEech
Confidence 355555 45799999988877544466788888899999888854
No 63
>3lqy_A Putative isochorismatase hydrolase; structural genomics, PSI-2, PROT structure initiative, midwest center for structural genomic; 1.75A {Oleispira antarctica} SCOP: c.33.1.0
Probab=32.78 E-value=70 Score=27.06 Aligned_cols=60 Identities=13% Similarity=0.192 Sum_probs=40.1
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+-.+.-|+- ...+.+ -.|+..| ++.|.++||-+|-.-..=..+||.-|..+|++++++-.
T Consensus 87 ~~~vi~K~~---~saF~~---t~L~~~L---~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~D 146 (190)
T 3lqy_A 87 GEAVVLKHQ---INSFRD---TDLKKVL---DDAGIKKLVIVGAMTHMAIDAVTRAAEDLGYECAVAHD 146 (190)
T ss_dssp TSCEEEESS---SSTTTT---SSHHHHH---HHC-CCEEEEEEECTTTHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCEEEECCC---CCcccc---chHHHHH---HhCCCCEEEEEecCcChHHHHHHHHHHHCCCEEEEech
Confidence 445777763 223333 1344444 46799999999877655577888889999999988853
No 64
>3irv_A Cysteine hydrolase; structural genomics, PSI-2, protein structure initiative, CY hydrolase; 1.60A {Pseudomonas syringae PV}
Probab=32.49 E-value=70 Score=28.21 Aligned_cols=60 Identities=15% Similarity=0.153 Sum_probs=40.7
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+-.+.-|+- ...+.| -.|+..| ++.|+++||-+|-.-..=+.+||.-|..+|.+++++-.
T Consensus 113 ~d~vi~K~~---~saF~~---t~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~D 172 (233)
T 3irv_A 113 DDVIVDKLF---YSGFHN---TDLDTVL---RARDVDTIIVCGTVTNVCCETTIRDGVHREYKVIALSD 172 (233)
T ss_dssp TSEEEEESS---SCSSTT---STHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEECCc---cCCCcC---CcHHHHH---HhCCCCeEEEEeecccHHHHHHHHHHHHCCCEEEEech
Confidence 445677752 222332 2355555 46799999998877655567888888999999888853
No 65
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=31.82 E-value=39 Score=29.25 Aligned_cols=42 Identities=19% Similarity=0.335 Sum_probs=31.8
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecccc
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQ 177 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~ 177 (325)
-++..+.++++.|++.|| ||.- +..+|+++||+++++..+.+
T Consensus 130 e~~~~i~~l~~~G~~vvV--G~~~------~~~~A~~~Gl~~vli~sg~e 171 (196)
T 2q5c_A 130 EITTLISKVKTENIKIVV--SGKT------VTDEAIKQGLYGETINSGEE 171 (196)
T ss_dssp GHHHHHHHHHHTTCCEEE--ECHH------HHHHHHHTTCEEEECCCCHH
T ss_pred HHHHHHHHHHHCCCeEEE--CCHH------HHHHHHHcCCcEEEEecCHH
Confidence 446788899999999875 4443 46788999999999865443
No 66
>3hu5_A Isochorismatase family protein; structural genomics, protein structure INI NEW YORK structural genomix research consortium, nysgxrc; 1.50A {Desulfovibrio vulgaris}
Probab=31.34 E-value=78 Score=27.12 Aligned_cols=38 Identities=13% Similarity=0.065 Sum_probs=30.1
Q ss_pred hhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 137 EDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 137 ~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
++.|.++||-+|-.-..=..+||.-|..+|++++++-.
T Consensus 122 ~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~D 159 (204)
T 3hu5_A 122 RRRGVDTLLVSGTQYPNCIRGTAVDAFALDYDVVVVTD 159 (204)
T ss_dssp HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred HhCCCCeEEEeeeccchHHHHHHHHHHHCCCEEEEehh
Confidence 46799999988877544566788888899999888854
No 67
>3hb7_A Isochorismatase hydrolase; PS structural genomics, midwest center for structural genomics structure initiative; 2.30A {Alkaliphilus metalliredigens}
Probab=30.90 E-value=80 Score=27.11 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=32.6
Q ss_pred HHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 129 MDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 129 LeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 111 L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~D 153 (204)
T 3hb7_A 111 LDLYL---KEEGIDTVVLTGVWTNVCVRSTATDALANAYKVITLSD 153 (204)
T ss_dssp HHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH---HHCCCCEEEEEeecccHHHHHHHHHHHHCCCEEEEech
Confidence 44444 45799999988877555567788888899999988853
No 68
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=30.88 E-value=1.2e+02 Score=28.69 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=34.4
Q ss_pred hhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecccc
Q 020509 137 EDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQ 177 (325)
Q Consensus 137 ~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~ 177 (325)
++..+|.+|-.||..|....-++.+|++.|.+++.+=..++
T Consensus 206 la~~~D~miVVGg~nSSNT~rL~eia~~~~~~ty~Ie~~~e 246 (297)
T 3dnf_A 206 LAPEVDVMIIIGGKNSGNTRRLYYISKELNPNTYHIETAEE 246 (297)
T ss_dssp HGGGSSEEEEESCTTCHHHHHHHHHHHHHCSSEEEESSGGG
T ss_pred HHhhCCEEEEECCCCCchhHHHHHHHHhcCCCEEEeCChHH
Confidence 45569999999999999999999999999998777644333
No 69
>3eef_A N-carbamoylsarcosine amidase related protein; structural genomics, protein structure initiative, midwest center for structural genomics; 2.35A {Thermoplasma acidophilum}
Probab=30.64 E-value=85 Score=26.27 Aligned_cols=65 Identities=15% Similarity=0.044 Sum_probs=41.5
Q ss_pred HHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecccc-CCccchhhHHHHh-CC-eEEEE
Q 020509 129 MDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQ-PQILTGYNLISTI-YG-KVTYV 197 (325)
Q Consensus 129 LeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~-~~~~tGN~ll~~L-lG-~V~~V 197 (325)
|+..| ++.|.++||-+|-.-..=..+||.-|...|++++++-..-. +...... ..++. +| +|...
T Consensus 101 L~~~L---~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~V~vv~Da~as~~~~~~a-~~m~~~~ga~v~~~ 168 (182)
T 3eef_A 101 LDMIL---RANGIDTVVLIGLDADICVRHTAADALYRNYRIIVVEDAVAARIDPNWK-DYFTRVYGATVKRS 168 (182)
T ss_dssp HHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEEEEECSSCTTHH-HHHHHHHCCEEECT
T ss_pred HHHHH---HhcCCCeEEEEEeccCHHHHHHHHHHHHCCCEEEEehhhcCCHHHHHHH-HHHHHhcCcEEeEH
Confidence 44444 45799999988877555567888888899999988753211 2222223 44444 57 66544
No 70
>3txy_A Isochorismatase family protein family; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.70A {Burkholderia thailandensis} SCOP: c.33.1.0
Probab=30.21 E-value=84 Score=26.87 Aligned_cols=44 Identities=18% Similarity=0.199 Sum_probs=33.3
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..| ++.|.++||-+|-.-..=..+||.-|..+|++++++..
T Consensus 116 ~L~~~L---~~~gi~~lvi~G~~t~~CV~~Ta~~a~~~G~~v~v~~D 159 (199)
T 3txy_A 116 DLDVQL---RRRGITDIVLTGIATNIGVESTAREAYENNYNVVVVSD 159 (199)
T ss_dssp SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHH---HhCCCCEEEEEeeccCHHHHHHHHHHHHCCCEEEEecH
Confidence 355555 45799999988877555567788888899999888854
No 71
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=29.23 E-value=3.6e+02 Score=25.21 Aligned_cols=87 Identities=8% Similarity=0.089 Sum_probs=47.1
Q ss_pred ChhHhhHHhhHHHh--hhCCCC------------eEEEeCcccchHHHHHHHHHHHh-------CC--------eEEEEe
Q 020509 123 GNKARKMDALLPLL--EDHIVT------------DLVTCGGCQSAHATAVAVSCAER-------GL--------KSHLLL 173 (325)
Q Consensus 123 GNK~RKLeylL~dA--~~~G~~------------~LVT~GG~QSNH~~AtAaaAa~l-------GL--------kcvlvl 173 (325)
+-....+|..+.+. ...|.+ .++|.||.++|++...++.-..+ |- +.++++
T Consensus 108 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~ 187 (486)
T 1js3_A 108 SPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYA 187 (486)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEE
T ss_pred ChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEE
Confidence 34467788776543 233443 47889999999877666532211 31 334444
Q ss_pred ccccCCccchhhHHHHhCC-eEEEECCC-Ccc-chHHHHHHH
Q 020509 174 RGEQPQILTGYNLISTIYG-KVTYVPRT-HYA-HRIEMLKSY 212 (325)
Q Consensus 174 rge~~~~~tGN~ll~~LlG-~V~~V~r~-~y~-~kda~~e~~ 212 (325)
.... ........+++| +++.|+.+ +++ .-+++.+++
T Consensus 188 s~~~---h~s~~~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i 226 (486)
T 1js3_A 188 SDQA---HSSVERAGLIGGVKLKAIPSDGKFAMRASALQEAL 226 (486)
T ss_dssp ETTC---CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHH
T ss_pred CCCC---cHHHHHHHHhCCCceEEeecCCCCCCCHHHHHHHH
Confidence 3211 222223345679 99888753 232 345555544
No 72
>3oqp_A Putative isochorismatase; catalytic triad, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; 1.22A {Burkholderia xenovorans}
Probab=28.69 E-value=87 Score=27.31 Aligned_cols=60 Identities=12% Similarity=0.137 Sum_probs=39.8
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..+.-|+- ...+.|. .|+..| ++.|.++||-+|-.-..=+.+||.-|..+|++++++-.
T Consensus 83 ~d~vi~K~~---~saF~~t---~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~dA~~~Gy~V~vv~D 142 (211)
T 3oqp_A 83 RDHYVEKSL---PSAFTGT---DLAGWL---AARQIDTLTVTGYMTHNCDASTINHAVHSGLAVEFLHD 142 (211)
T ss_dssp CSEEEEESS---SCSSTTS---SHHHHH---HTTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CcEEEECCc---cCCCccc---HHHHHH---HhCCCCEEEEEeeccCHHHHHHHHHHHHCCCeEEEech
Confidence 445677753 1223332 244444 46799999988876544466788888899999988853
No 73
>3ot4_A Putative isochorismatase; NICF, maleamate hydrolase, hydrol; 2.40A {Bordetella bronchiseptica} PDB: 3uao_A
Probab=28.53 E-value=95 Score=27.64 Aligned_cols=60 Identities=18% Similarity=0.211 Sum_probs=39.6
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..+.-|+- ...+.+ -.|+..| ++.|.++||-+|-.-..=+.+||.-|..+|++++++..
T Consensus 133 ~d~vi~K~~---~saF~~---t~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~D 192 (236)
T 3ot4_A 133 GEYVVRKST---PSAFYG---TMLAAWL---AQRGVQTLLVAGATTSGCVRASVVDAMSAGFRPLVLSD 192 (236)
T ss_dssp TCEEEEESS---SSTTTT---SSHHHHH---HHTTCCEEEEEESCTTTHHHHHHHHHHHHTCEEEEEEE
T ss_pred CceEEECCc---cCcccC---chHHHHH---HHCCCCEEEEeCccCcHHHHHHHHHHHHCCCEEEEech
Confidence 445666752 122322 2344444 46799999998877544455888889999999888854
No 74
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=28.41 E-value=86 Score=28.21 Aligned_cols=43 Identities=14% Similarity=0.240 Sum_probs=32.3
Q ss_pred HHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 129 MDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 129 LeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
|+..| ++.|.++||-+|-.-..=+.+||.-|...|++++++-.
T Consensus 136 L~~~L---~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~D 178 (287)
T 2fq1_A 136 LEQML---KESGRNQLIITGVYAHIGCMTTATDAFMRDIKPFMVAD 178 (287)
T ss_dssp HHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH---HHCCCCEEEEEEeCcchHHHHHHHHHHHCCCEEEEech
Confidence 44444 46799999988876544566788888899999888854
No 75
>2gx8_A NIF3-related protein; structural genomics, unknown function, protein structure initiative, midwest center for structural genomics, MCSG; HET: EPE; 2.20A {Bacillus cereus} SCOP: c.135.1.1
Probab=28.07 E-value=71 Score=31.20 Aligned_cols=62 Identities=6% Similarity=0.061 Sum_probs=33.4
Q ss_pred HhhHHHhhhCCCCeEEE-----eCcc----cchHHHHHHHHHHHhCCeEEEEeccccCCccch-hhHHHHhCC
Q 020509 130 DALLPLLEDHIVTDLVT-----CGGC----QSAHATAVAVSCAERGLKSHLLLRGEQPQILTG-YNLISTIYG 192 (325)
Q Consensus 130 eylL~dA~~~G~~~LVT-----~GG~----QSNH~~AtAaaAa~lGLkcvlvlrge~~~~~tG-N~ll~~LlG 192 (325)
+.++.+|.+.|++-||| |-+. ..+--......+.+.|+.....--.-|. .+.| |..+.+.+|
T Consensus 75 ~~Vv~eAi~~gadlIItHHPlif~~lk~i~~~~~~~r~i~~li~~~Iavya~HTnlD~-~~~GvNd~LA~~LG 146 (397)
T 2gx8_A 75 EEVVDEAIQLGANVIIAHHPLIFNPLKAIHTDKAYGKIIEKCIKNDIAIYAAHTNVDV-AKGGVNDLLAEALG 146 (397)
T ss_dssp HHHHHHHHHHTCCEEEESSCSCCSCCSCCCTTSHHHHHHHHHHHTTCEEEECCHHHHH-STTSHHHHHHHHTT
T ss_pred HHHHHHHHHCCCCEEEECCccccCCccccCcCcHHHHHHHHHHHCCCeEEEeechhhc-CCCCHHHHHHHHcC
Confidence 35677777778887777 3222 3333444555556666664443222221 1224 666777777
No 76
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=27.99 E-value=75 Score=24.74 Aligned_cols=29 Identities=21% Similarity=0.225 Sum_probs=22.2
Q ss_pred CCeEEEeCcccchHHHHHHHHHHHhCCeEEEE
Q 020509 141 VTDLVTCGGCQSAHATAVAVSCAERGLKSHLL 172 (325)
Q Consensus 141 ~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlv 172 (325)
.|.+| .||+- -+.++|...++.|++++++
T Consensus 3 ~dV~I-IGaGp--aGL~aA~~La~~G~~V~v~ 31 (336)
T 3kkj_A 3 VPIAI-IGTGI--AGLSAAQALTAAGHQVHLF 31 (336)
T ss_dssp CCEEE-ECCSH--HHHHHHHHHHHTTCCEEEE
T ss_pred CCEEE-ECcCH--HHHHHHHHHHHCCCCEEEE
Confidence 45444 55555 6899999999999998877
No 77
>1ve5_A Threonine deaminase; riken structural genomics/Pro initiative, RSGI, structural genomics, lyase; HET: PLP; 2.15A {Thermus thermophilus} SCOP: c.79.1.1
Probab=27.79 E-value=28 Score=31.59 Aligned_cols=37 Identities=8% Similarity=-0.132 Sum_probs=28.2
Q ss_pred CcEEEEeCCCcchhhhhhhcccccccccc-------cceEEeeecc
Q 020509 258 KKVLIVNEGAGDAVALLVLIPGSFTWKKK-------GYKICCGCWY 296 (325)
Q Consensus 258 ~~~y~ip~GGSnaiG~lGyi~~~~e~~~~-------~~~~~~~~~~ 296 (325)
+..|+.|.+ |+....||...++|+.++ -|.++|.||-
T Consensus 136 ~~~~~~~~~--n~~~~~g~~t~~~Ei~~q~~~~~~~~d~vvvpvG~ 179 (311)
T 1ve5_A 136 GYALIHPFD--DPLVIAGQGTAGLELLAQAGRMGVFPGAVLAPVGG 179 (311)
T ss_dssp CCEECCSSS--SHHHHHHHHHHHHHHHHHHHHHTCCCSEEEEECSS
T ss_pred CcEecCCCC--CcchhhhccHHHHHHHHHHHhcCCCCCEEEEccCc
Confidence 456777766 899999998888888743 4778888774
No 78
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=27.74 E-value=52 Score=28.25 Aligned_cols=72 Identities=17% Similarity=0.102 Sum_probs=38.7
Q ss_pred CCCCeEEEeCcc-cchHHHHHHHHHHHhCCeEEEEeccccCC-ccchhhHHHHhCC-eEEEECCCCccchHHHHHHHH
Q 020509 139 HIVTDLVTCGGC-QSAHATAVAVSCAERGLKSHLLLRGEQPQ-ILTGYNLISTIYG-KVTYVPRTHYAHRIEMLKSYA 213 (325)
Q Consensus 139 ~G~~~LVT~GG~-QSNH~~AtAaaAa~lGLkcvlvlrge~~~-~~tGN~ll~~LlG-~V~~V~r~~y~~kda~~e~~~ 213 (325)
.|+..||| ||. .+-=++++|...++.|.+.+++.+..... ...-.. +....| +++++.- |-+..+++.+.+.
T Consensus 19 ~~k~vlIT-Gas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~-Dl~~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVT-GASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKE-LEKTYGIKAKAYKC-QVDSYESCEKLVK 93 (267)
T ss_dssp TTCEEEET-TCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHH-HHHHHCCCEECCBC-CTTCHHHHHHHHH
T ss_pred CCCEEEEE-CCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHH-HHHhcCCceeEEec-CCCCHHHHHHHHH
Confidence 34445555 443 14478999999999999887776654321 111111 122346 7776653 2334444444333
No 79
>2a67_A Isochorismatase family protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 2.00A {Enterococcus faecalis}
Probab=27.71 E-value=84 Score=25.98 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=38.2
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEe
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLL 173 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvl 173 (325)
+..++-|+- ...+.|. .|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++-
T Consensus 75 ~~~vi~K~~---~saF~~t---~L~~~L---~~~gi~~lvv~G~~T~~CV~~Ta~da~~~Gy~v~v~~ 133 (167)
T 2a67_A 75 TDFFIRKTH---ANAFYQT---NLNDLL---TEQAVQTLEIAGVQTEFCVDTTIRMAHGLGYTCLMTP 133 (167)
T ss_dssp TSEEEEESS---SSTTTTS---SHHHHH---HHTTCCEEEEEEECTTTHHHHHHHHHHHHTCEEEECT
T ss_pred CCEEEECCC---CCCCCCC---cHHHHH---HHCCCCEEEEEecccChHHHHHHHHHHHCCCEEEEec
Confidence 335666754 1233332 344444 4579999998886654445678888889999987774
No 80
>1nba_A N-carbamoylsarcosine amidohydrolase; hydrolase(IN linear amides); 2.00A {Arthrobacter SP} SCOP: c.33.1.3
Probab=27.55 E-value=91 Score=28.25 Aligned_cols=58 Identities=10% Similarity=0.222 Sum_probs=38.6
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHH-HHHHHHHHhCCeEEEEe
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHAT-AVAVSCAERGLKSHLLL 173 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~-AtAaaAa~lGLkcvlvl 173 (325)
+..+.-|+- ...+-|. .|+..| ++.|+++||-+|-. +|+|+ +||.-|..+|.+++++-
T Consensus 138 ~d~vi~K~~---~SaF~~T---~L~~~L---r~~gi~~lvI~Gv~-T~~CV~~Ta~dA~~~Gy~V~Vv~ 196 (264)
T 1nba_A 138 GEVVIEKNR---ASAFPGT---NLELFL---TSNRIDTLIVTGAT-AAGCVRHTVEDAIAKGFRPIIPR 196 (264)
T ss_dssp TCEEEEESS---SSSSTTS---SHHHHH---HHTTCCEEEEEEEC-TTTHHHHHHHHHHHHTCEEEEEG
T ss_pred CCEEEeCCc---CCCcccc---hHHHHH---HhCCCCEEEEEecC-cCCHHHHHHHHHHHCCCEEEEec
Confidence 345666752 2223332 355555 45799999988766 56655 88888899999988874
No 81
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=27.53 E-value=68 Score=30.22 Aligned_cols=32 Identities=16% Similarity=0.131 Sum_probs=27.7
Q ss_pred CCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEe
Q 020509 140 IVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLL 173 (325)
Q Consensus 140 G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvl 173 (325)
..++|...||+| -++.++.+|+++|++++++-
T Consensus 23 ~~~~I~ilGgG~--lg~~l~~aa~~lG~~v~~~d 54 (403)
T 3k5i_A 23 NSRKVGVLGGGQ--LGRMLVESANRLNIQVNVLD 54 (403)
T ss_dssp SCCEEEEECCSH--HHHHHHHHHHHHTCEEEEEE
T ss_pred CCCEEEEECCCH--HHHHHHHHHHHCCCEEEEEE
Confidence 356788889988 78999999999999998886
No 82
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=27.46 E-value=2.4e+02 Score=26.82 Aligned_cols=87 Identities=7% Similarity=0.033 Sum_probs=47.5
Q ss_pred hhHhhHHhhHHHh--hhCCC------------CeEEEeCcccchHHHHHHHHHHHh------C-------C--eEEEEec
Q 020509 124 NKARKMDALLPLL--EDHIV------------TDLVTCGGCQSAHATAVAVSCAER------G-------L--KSHLLLR 174 (325)
Q Consensus 124 NK~RKLeylL~dA--~~~G~------------~~LVT~GG~QSNH~~AtAaaAa~l------G-------L--kcvlvlr 174 (325)
--...||..+.+- ...|. ..++|.||.+||++...++.-+.+ | + +.++++.
T Consensus 109 p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s 188 (475)
T 3k40_A 109 PACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCS 188 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEE
T ss_pred cHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEEC
Confidence 3478888876542 23343 368899999999887766533321 1 1 2345543
Q ss_pred cccCCccchhhHHHHhCC-eEEEECCCC-ccchHHHHHHHH
Q 020509 175 GEQPQILTGYNLISTIYG-KVTYVPRTH-YAHRIEMLKSYA 213 (325)
Q Consensus 175 ge~~~~~tGN~ll~~LlG-~V~~V~r~~-y~~kda~~e~~~ 213 (325)
... ........+++| +++.|+-+. +-.-+++.+++.
T Consensus 189 ~~~---H~s~~~~~~~~g~~~~~v~~d~~~~d~~~L~~~i~ 226 (475)
T 3k40_A 189 DQA---HSSVERAGLLGGVKLRSVQSENHRMRGAALEKAIE 226 (475)
T ss_dssp TTS---CHHHHHHHHHHTCEEEEECCBTTBCCHHHHHHHHH
T ss_pred CCc---hHHHHHHHHHcCCceEEEECCCCCcCHHHHHHHHH
Confidence 221 222222345678 998887532 223344555443
No 83
>1jq5_A Glycerol dehydrogenase; oxidoreductase, NAD, glycerol metabolism; HET: NAD; 1.70A {Geobacillus stearothermophilus} SCOP: e.22.1.2 PDB: 1jpu_A* 1jqa_A*
Probab=27.41 E-value=1e+02 Score=28.74 Aligned_cols=46 Identities=7% Similarity=0.110 Sum_probs=32.7
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
-++..+..+++.++|.||..||+-. +-..-++|...|++.+.|-..
T Consensus 74 ~v~~~~~~~~~~~~d~IIavGGGsv--~D~aK~iA~~~~~p~i~IPTT 119 (370)
T 1jq5_A 74 EVERIANIARKAEAAIVIGVGGGKT--LDTAKAVADELDAYIVIVPTA 119 (370)
T ss_dssp HHHHHHHHHHHTTCSEEEEEESHHH--HHHHHHHHHHHTCEEEEEESS
T ss_pred HHHHHHHHHHhcCCCEEEEeCChHH--HHHHHHHHHhcCCCEEEeccc
Confidence 5666777778899999999988863 333333445679998888543
No 84
>3tg2_A Vibriobactin-specific isochorismatase; hydrolase; HET: ISC PGE; 1.10A {Vibrio cholerae} PDB: 3tb4_A*
Probab=27.25 E-value=83 Score=27.73 Aligned_cols=44 Identities=9% Similarity=0.047 Sum_probs=33.0
Q ss_pred hHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 128 KMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 128 KLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
.|+..| ++.|.++||-+|-.-..=+.+||.-|..+|++++++-.
T Consensus 128 ~L~~~L---~~~gi~~lii~G~~t~~CV~~Ta~da~~~Gy~v~vv~D 171 (223)
T 3tg2_A 128 PLLDWL---RETGRDQLIITGVYAHIGILSTALDAFMFDIQPFVIGD 171 (223)
T ss_dssp SHHHHH---HHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHH---HhcCcCceEEeecccChHHHHHHHHHHHCCCEEEEeCc
Confidence 355444 46799999988876544456888888899999988864
No 85
>3mcw_A Putative hydrolase; isochorismatase family, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.06A {Chromobacterium violaceum}
Probab=25.38 E-value=98 Score=26.41 Aligned_cols=60 Identities=18% Similarity=0.175 Sum_probs=39.5
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..+.-|+- ...+.+ -.|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 87 ~~~vi~K~~---~saF~~---t~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~v~vv~D 146 (198)
T 3mcw_A 87 GETVIAKQT---NSAFIG---TGLEALL---RANGWLELVVAGVSTSNSVEATVRMAGNLGFAVCLAED 146 (198)
T ss_dssp TCEEEEESS---SSTTTT---SSHHHHH---HHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEEcCc---cCcccc---chHHHHH---HcCCCCeEEEEEcCcChHHHHHHHHHHHCCCEEEEeCc
Confidence 445677752 223333 2355555 45689999988876544456788888899999988853
No 86
>4h17_A Hydrolase, isochorismatase family; rossmann-like fold, structural genomics, joint center for ST genomics, JCSG; 1.60A {Pseudomonas putida KT2440}
Probab=25.26 E-value=97 Score=26.54 Aligned_cols=60 Identities=15% Similarity=0.203 Sum_probs=39.2
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
+..++-|+- ...+.+ -.|+..| ++.|.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 97 ~~~vi~K~~---~saF~~---t~L~~~L---~~~gi~~lvi~G~~T~~CV~~Ta~da~~~Gy~V~vv~D 156 (197)
T 4h17_A 97 GEIVIEKRM---PNAFKN---TKLHETL---QELGHLDLIVCGFMSHSSVSTTVRRAKDYGYRCTLVED 156 (197)
T ss_dssp TCEEEEESS---SSTTTT---TCHHHHH---HHHTCSEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCEEEeCCc---CCCccc---chHHHHH---HhcCCCEEEEEeeCcCHHHHHHHHHHHHCCCEEEEeCc
Confidence 345666753 122322 2354444 45689999988876544466788888899999888854
No 87
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=24.98 E-value=1.2e+02 Score=28.98 Aligned_cols=86 Identities=7% Similarity=0.027 Sum_probs=47.4
Q ss_pred hHhhHHhhHHHh--hhCCC-------------CeEEEeCcccchHHHHHHHHHHHh------C---------CeEEEEec
Q 020509 125 KARKMDALLPLL--EDHIV-------------TDLVTCGGCQSAHATAVAVSCAER------G---------LKSHLLLR 174 (325)
Q Consensus 125 K~RKLeylL~dA--~~~G~-------------~~LVT~GG~QSNH~~AtAaaAa~l------G---------Lkcvlvlr 174 (325)
-...||..+.+- ...|. ..++|.||.++|++..+++.-+.+ | =+.++++.
T Consensus 115 ~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~v~~s 194 (481)
T 4e1o_A 115 ACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSLNARLVAYAS 194 (481)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccccCCeEEEEc
Confidence 377888776543 22232 348899999999987776644321 1 13455543
Q ss_pred cccCCccchhhHHHHhCC-eEEEECCC-Ccc-chHHHHHHHH
Q 020509 175 GEQPQILTGYNLISTIYG-KVTYVPRT-HYA-HRIEMLKSYA 213 (325)
Q Consensus 175 ge~~~~~tGN~ll~~LlG-~V~~V~r~-~y~-~kda~~e~~~ 213 (325)
... .....-..++.| +++.|+.+ +++ .-+++.+++.
T Consensus 195 ~~~---H~s~~~~~~~~g~~~~~v~~~~~~~~d~~~Le~~i~ 233 (481)
T 4e1o_A 195 DQA---HSSVEKAGLISLVKMKFLPVDDNFSLRGEALQKAIE 233 (481)
T ss_dssp TTS---CHHHHHHHHHHTCEEEEECCCTTSCCCHHHHHHHHH
T ss_pred Ccc---hHHHHHHHHhCCCceEEEEcCCCCcCCHHHHHHHHH
Confidence 221 112222234678 99888753 333 3455555554
No 88
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=24.43 E-value=1.6e+02 Score=24.60 Aligned_cols=42 Identities=14% Similarity=-0.018 Sum_probs=33.1
Q ss_pred hhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEE
Q 020509 131 ALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLL 172 (325)
Q Consensus 131 ylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlv 172 (325)
+.+.++.+.|++.|+..+.....+...+...++++|+++.+-
T Consensus 68 ~~~~~~~~~Gad~v~v~~~~~~~~~~~~~~~~~~~g~~~~v~ 109 (211)
T 3f4w_A 68 FESQLLFDAGADYVTVLGVTDVLTIQSCIRAAKEAGKQVVVD 109 (211)
T ss_dssp HHHHHHHHTTCSEEEEETTSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHhcCCCEEEEeCCCChhHHHHHHHHHHHcCCeEEEE
Confidence 457888999999988765543357788889999999998763
No 89
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=23.91 E-value=79 Score=29.36 Aligned_cols=31 Identities=26% Similarity=0.244 Sum_probs=26.5
Q ss_pred CeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 142 TDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 142 ~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
++|.-.|++| -++.++.+|+++|++++++-.
T Consensus 13 ~~IlIlG~G~--lg~~la~aa~~lG~~viv~d~ 43 (377)
T 3orq_A 13 ATIGIIGGGQ--LGKMMAQSAQKMGYKVVVLDP 43 (377)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCEEEEEEC
Confidence 5677789998 789999999999999888844
No 90
>3kl2_A Putative isochorismatase; structural genomics, unknown function, PSI-2, protein struct initiative; 2.30A {Streptomyces avermitilis} SCOP: c.33.1.0
Probab=23.65 E-value=1.1e+02 Score=26.85 Aligned_cols=43 Identities=21% Similarity=0.223 Sum_probs=32.6
Q ss_pred HHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 129 MDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 129 LeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
|+..| ++.|.++||-+|-.-..=..+||.-|...|++++++-.
T Consensus 142 L~~~L---~~~gi~~lii~G~~T~~CV~~Ta~da~~~Gy~v~vv~D 184 (226)
T 3kl2_A 142 LDFIL---RSKGVDTIVLGGFLTNCCVESTMRTGYERGFRVITLTD 184 (226)
T ss_dssp HHHHH---HHHTCCEEEEEEECTTTHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHH---hCCCCCcEEEeccCcchHHHHHHHHHHHCCCEEEEech
Confidence 44444 45799999988877555567888888899999888853
No 91
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=23.37 E-value=2.3e+02 Score=24.54 Aligned_cols=38 Identities=21% Similarity=0.066 Sum_probs=26.4
Q ss_pred CCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecccc
Q 020509 140 IVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQ 177 (325)
Q Consensus 140 G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~ 177 (325)
|+..|||-++.-+-=++|+|..-++.|-+.++.-|.++
T Consensus 6 gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~ 43 (256)
T 4fs3_A 6 NKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKER 43 (256)
T ss_dssp TCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHH
Confidence 55566664322223689999999999999888776543
No 92
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=22.98 E-value=1.4e+02 Score=25.22 Aligned_cols=46 Identities=15% Similarity=0.091 Sum_probs=33.7
Q ss_pred hHhhHHhhHHHhhhCCCCeEEEeCccc---------chHHHHHHHHHHHhCCeEE
Q 020509 125 KARKMDALLPLLEDHIVTDLVTCGGCQ---------SAHATAVAVSCAERGLKSH 170 (325)
Q Consensus 125 K~RKLeylL~dA~~~G~~~LVT~GG~Q---------SNH~~AtAaaAa~lGLkcv 170 (325)
....++..+..|.+.|++.|++..|.. ...+..++..|++.|++..
T Consensus 83 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~ 137 (272)
T 2q02_A 83 VVKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGL 137 (272)
T ss_dssp HHHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEE
Confidence 356788889999999999998865531 3345667777888898633
No 93
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=22.90 E-value=2.7e+02 Score=23.85 Aligned_cols=36 Identities=19% Similarity=0.118 Sum_probs=25.2
Q ss_pred CCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecccc
Q 020509 140 IVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRGEQ 177 (325)
Q Consensus 140 G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrge~ 177 (325)
|+..|||-|+ +-=++++|..-++.|.+.+++-|..+
T Consensus 7 ~k~vlVTGas--~GIG~aia~~l~~~G~~V~~~~r~~~ 42 (252)
T 3h7a_A 7 NATVAVIGAG--DYIGAEIAKKFAAEGFTVFAGRRNGE 42 (252)
T ss_dssp SCEEEEECCS--SHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCEEEEECCC--chHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4445555443 44789999999999999777766443
No 94
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=22.49 E-value=1.1e+02 Score=28.48 Aligned_cols=47 Identities=6% Similarity=0.040 Sum_probs=38.9
Q ss_pred HhhHHHhhhCCCCeEEEeCcccc-hHHHHHHHHHHHhCCeEEEEeccc
Q 020509 130 DALLPLLEDHIVTDLVTCGGCQS-AHATAVAVSCAERGLKSHLLLRGE 176 (325)
Q Consensus 130 eylL~dA~~~G~~~LVT~GG~QS-NH~~AtAaaAa~lGLkcvlvlrge 176 (325)
+|.+.+|+..|+|.|+-.-++-+ ..+..+...|..+||.+.+=+..+
T Consensus 116 ~yQI~eAr~~GADaILLI~a~L~~~~l~~l~~~A~~lGl~~LvEVh~~ 163 (258)
T 4a29_A 116 ESQIDDAYNLGADTVLLIVKILTERELESLLEYARSYGMEPLILINDE 163 (258)
T ss_dssp HHHHHHHHHHTCSEEEEEGGGSCHHHHHHHHHHHHHTTCCCEEEESSH
T ss_pred HHHHHHHHHcCCCeeehHHhhcCHHHHHHHHHHHHHHhHHHHHhcchH
Confidence 48899999999999987666655 468899999999999998876543
No 95
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=22.08 E-value=2.1e+02 Score=25.26 Aligned_cols=34 Identities=24% Similarity=0.190 Sum_probs=24.0
Q ss_pred CCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 140 IVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 140 G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
|+..|||-|+. -=++++|..-++.|.+.+++.+.
T Consensus 49 ~k~vlVTGas~--GIG~aia~~la~~G~~V~~~~~~ 82 (294)
T 3r3s_A 49 DRKALVTGGDS--GIGRAAAIAYAREGADVAINYLP 82 (294)
T ss_dssp TCEEEEETTTS--HHHHHHHHHHHHTTCEEEEECCG
T ss_pred CCEEEEeCCCc--HHHHHHHHHHHHCCCEEEEEeCC
Confidence 44556654443 37899999999999987776554
No 96
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=21.78 E-value=91 Score=28.81 Aligned_cols=31 Identities=26% Similarity=0.287 Sum_probs=26.0
Q ss_pred CeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 142 TDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 142 ~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
++|.-.|+.| -++.++.+++++|++++++-.
T Consensus 15 k~IlIlG~G~--~g~~la~aa~~~G~~vi~~d~ 45 (389)
T 3q2o_A 15 KTIGIIGGGQ--LGRMMALAAKEMGYKIAVLDP 45 (389)
T ss_dssp SEEEEECCSH--HHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCH--HHHHHHHHHHHcCCEEEEEeC
Confidence 4677788888 689999999999999888843
No 97
>2p4s_A Purine nucleoside phosphorylase; transferase; HET: DIH; 2.20A {Anopheles gambiae}
Probab=21.72 E-value=61 Score=31.54 Aligned_cols=44 Identities=11% Similarity=0.073 Sum_probs=32.6
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCccc
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQ 151 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~Q 151 (325)
|.+|-+-. -.-| .+.|.|+.+..+.+..++..|+++||.+|++.
T Consensus 160 G~~Vvvm~-GrgH-~yeg~~v~~v~a~i~llk~lGV~~II~tgaaG 203 (373)
T 2p4s_A 160 GVPVMCMQ-GRFH-HYEGYPLAKCAMPVRVMHLIGCTHLIATNAAG 203 (373)
T ss_dssp TEEEEEEE-SCCC-GGGTCCHHHHHHHHHHHHHHTCCEEEEEEEEE
T ss_pred CEEEEEEe-CCCc-CCCCCCHHHHHHHHHHHHHcCCCEEEEeccEe
Confidence 56666665 3333 36788888888888888889999999866665
No 98
>3clh_A 3-dehydroquinate synthase; shikimate pathway, aromatic amino acid biosynthesis, DHQS, amino-acid biosynthesis, cytoplasm, lyase, NAD; HET: NAD; 2.40A {Helicobacter pylori}
Probab=21.27 E-value=1e+02 Score=28.63 Aligned_cols=50 Identities=14% Similarity=0.111 Sum_probs=36.9
Q ss_pred HhhHHhhHHHhhhCCC---CeEEEeCcccchHHHHHHHHHHHhCCeEEEEecc
Q 020509 126 ARKMDALLPLLEDHIV---TDLVTCGGCQSAHATAVAVSCAERGLKSHLLLRG 175 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~---~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlrg 175 (325)
.--++..+..+++.++ |.||..||+-..=+.-.+++....|++.+.+--.
T Consensus 68 ~~~v~~~~~~~~~~~~~r~d~iIavGGGsv~D~ak~~A~~~~rgip~i~IPTT 120 (343)
T 3clh_A 68 FHSLERILNNAFEMQLNRHSLMIALGGGVISDMVGFASSIYFRGIDFINIPTT 120 (343)
T ss_dssp HHHHHHHHHHHHHTTCCTTCEEEEEESHHHHHHHHHHHHHBTTCCEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEECChHHHHHHHHHHHHhccCCCEEEeCCc
Confidence 4566777777888899 9999999987555555555556789998887543
No 99
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=21.24 E-value=93 Score=29.60 Aligned_cols=31 Identities=19% Similarity=0.150 Sum_probs=25.9
Q ss_pred CCeEEEeCcccchHHHHHHHHHHHhCCeEEEEe
Q 020509 141 VTDLVTCGGCQSAHATAVAVSCAERGLKSHLLL 173 (325)
Q Consensus 141 ~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvl 173 (325)
.++|.-.||+| -++.++.+|+++|++++++-
T Consensus 35 ~~~IlIlG~G~--lg~~~~~aa~~lG~~v~v~d 65 (419)
T 4e4t_A 35 GAWLGMVGGGQ--LGRMFCFAAQSMGYRVAVLD 65 (419)
T ss_dssp TCEEEEECCSH--HHHHHHHHHHHTTCEEEEEC
T ss_pred CCEEEEECCCH--HHHHHHHHHHHCCCEEEEEC
Confidence 35677789998 68999999999999987763
No 100
>3hl0_A Maleylacetate reductase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE NAD EPE; 1.60A {Agrobacterium tumefaciens str}
Probab=21.04 E-value=1.5e+02 Score=27.85 Aligned_cols=47 Identities=6% Similarity=-0.017 Sum_probs=33.8
Q ss_pred HhhHHhhHHHhhhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 126 ARKMDALLPLLEDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 126 ~RKLeylL~dA~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
...++..+..+++.++|.||..||+- =+-..=++|.+.+++.+.|-.
T Consensus 73 ~~~v~~~~~~~~~~~~D~IIavGGGs--~iD~aK~iA~~~~~p~i~IPT 119 (353)
T 3hl0_A 73 VEVTKTAVEAYRAAGADCVVSLGGGS--TTGLGKAIALRTDAAQIVIPT 119 (353)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEESHH--HHHHHHHHHHHHCCEEEEEEC
T ss_pred HHHHHHHHHHHhccCCCEEEEeCCcH--HHHHHHHHHhccCCCEEEEeC
Confidence 45566777778889999999999986 233333444578999888754
No 101
>1g2o_A Purine nucleoside phosphorylase; trimer, transition-state complex, transferase; HET: IMH; 1.75A {Mycobacterium tuberculosis} SCOP: c.56.2.1 PDB: 1i80_A* 1n3i_A* 3iom_A*
Probab=20.79 E-value=62 Score=29.65 Aligned_cols=44 Identities=11% Similarity=0.061 Sum_probs=30.6
Q ss_pred CCeEEEEecCCCCCCCCChhHhhHHhhHHHhhhCCCCeEEEeCccc
Q 020509 106 DRCFYVVRDDLLHPLVNGNKARKMDALLPLLEDHIVTDLVTCGGCQ 151 (325)
Q Consensus 106 G~~l~IKRDDL~h~~lgGNK~RKLeylL~dA~~~G~~~LVT~GG~Q 151 (325)
|.+|.+-. -.-| .+.|.|+.+....+...+..|+++||.+|++.
T Consensus 79 G~~V~~~~-G~gh-~~~~~~v~~~~a~i~~l~~lGv~~iI~tgaaG 122 (268)
T 1g2o_A 79 AHRVLVLA-GRIH-AYEGHDLRYVVHPVRAARAAGAQIMVLTNAAG 122 (268)
T ss_dssp TEEEEEEE-CCCC-GGGTCCHHHHSHHHHHHHHTTCCEEEEEEEEE
T ss_pred CEEEEEEE-CCCc-CCCCCCHHHHHHHHHHHHHcCCCEEEEeccee
Confidence 56666653 2222 24677888877777777889999999876665
No 102
>1yac_A Ycacgp, YCAC gene product; unknown bacterial hydrolase, three layer alpha-beta-alpha SA topology, ENTB homolog, cshase homolog; 1.80A {Escherichia coli} SCOP: c.33.1.3
Probab=20.71 E-value=92 Score=26.87 Aligned_cols=38 Identities=16% Similarity=0.190 Sum_probs=30.3
Q ss_pred hhCCCCeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 137 EDHIVTDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 137 ~~~G~~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
++.|.++||-+|-.-..=..+||.-|..+|.+++++-.
T Consensus 101 ~~~gi~~lvi~Gv~T~~CV~~Ta~dA~~~Gy~V~vv~D 138 (208)
T 1yac_A 101 KATGKKQLIIAGVVTEVCVAFPALSAIEEGFDVFVVTD 138 (208)
T ss_dssp HHTTCSEEEEEEBSCCCCCHHHHHHHHHTTCEEEEETT
T ss_pred HhcCCCEEEEEEeccchhHHHHHHHHHHCCCEEEEECc
Confidence 46799999998877544467888888999999888753
No 103
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=20.58 E-value=86 Score=26.93 Aligned_cols=45 Identities=18% Similarity=0.090 Sum_probs=33.4
Q ss_pred hhHHhhHHHhhhCCCCeEEEeCcccch--HHHHHHHHHHHhCCeEEE
Q 020509 127 RKMDALLPLLEDHIVTDLVTCGGCQSA--HATAVAVSCAERGLKSHL 171 (325)
Q Consensus 127 RKLeylL~dA~~~G~~~LVT~GG~QSN--H~~AtAaaAa~lGLkcvl 171 (325)
..++..+..|.+.|++.|++..|.... .+..++..|++.|++..+
T Consensus 84 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~l~l 130 (264)
T 1yx1_A 84 PELEPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQLLV 130 (264)
T ss_dssp TTHHHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCEEEE
Confidence 678888999999999999875433221 577788888888986443
No 104
>1sg6_A Pentafunctional AROM polypeptide; shikimate pathway, aromatic amino acid biosynthesis, DHQS, O form J, domain movement, cyclase, lyase; HET: NAD; 1.70A {Emericella nidulans} SCOP: e.22.1.1 PDB: 1nr5_A* 1nrx_A* 1nua_A 1nva_A* 1nvb_A* 1nvd_A* 1nve_A* 1nvf_A* 1dqs_A*
Probab=20.29 E-value=1.5e+02 Score=28.16 Aligned_cols=51 Identities=16% Similarity=0.147 Sum_probs=37.2
Q ss_pred hh-HhhHHhhHHHhhhCC--C---CeEEEeCcccchHHHHHHHHHHHhCCeEEEEec
Q 020509 124 NK-ARKMDALLPLLEDHI--V---TDLVTCGGCQSAHATAVAVSCAERGLKSHLLLR 174 (325)
Q Consensus 124 NK-~RKLeylL~dA~~~G--~---~~LVT~GG~QSNH~~AtAaaAa~lGLkcvlvlr 174 (325)
|| ..-++..+..+++.+ + +.||..||+-.-=+.-.+++..+.|++.+.|-.
T Consensus 83 ~k~~~~v~~~~~~~~~~~~~~~r~d~iIalGGGsv~D~ak~~Aa~~~rgip~i~IPT 139 (393)
T 1sg6_A 83 SKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPT 139 (393)
T ss_dssp GSSHHHHHHHHHHHHTSSSCCCTTCEEEEEESHHHHHHHHHHHHHGGGCCEEEEEEC
T ss_pred CCCHHHHHHHHHHHHHcCCCCCCCCEEEEECCcHHHHHHHHHHHHhcCCCCEEEECC
Confidence 55 455666777778888 8 999999998755555555555678999888754
No 105
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=20.24 E-value=1.7e+02 Score=27.48 Aligned_cols=50 Identities=22% Similarity=0.231 Sum_probs=36.0
Q ss_pred hhHHhhHHHhhhCCCC-eEEEeCccc-----------ch-----HHHHHHHHHHHhCCeEEEEeccc
Q 020509 127 RKMDALLPLLEDHIVT-DLVTCGGCQ-----------SA-----HATAVAVSCAERGLKSHLLLRGE 176 (325)
Q Consensus 127 RKLeylL~dA~~~G~~-~LVT~GG~Q-----------SN-----H~~AtAaaAa~lGLkcvlvlrge 176 (325)
..++.++..-.-.|.+ .|||.||.. +| -+.|+|.++.+.|-+++++.+..
T Consensus 23 ~~i~~~~~~~~l~gk~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 23 EVMARFAARLGAQGRRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred HHHHHHhhhhhhcCCeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4444444433357888 889988871 23 48999999999999988887743
No 106
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=20.10 E-value=1.9e+02 Score=29.12 Aligned_cols=60 Identities=8% Similarity=-0.171 Sum_probs=33.3
Q ss_pred hhHhhHHhhHHHhhhCCCCeEEEeCcccchHH-HHHHHHHHH------hCCeEEEEeccccCCccchhh
Q 020509 124 NKARKMDALLPLLEDHIVTDLVTCGGCQSAHA-TAVAVSCAE------RGLKSHLLLRGEQPQILTGYN 185 (325)
Q Consensus 124 NK~RKLeylL~dA~~~G~~~LVT~GG~QSNH~-~AtAaaAa~------lGLkcvlvlrge~~~~~tGN~ 185 (325)
....+.-.-|+..++..-=+|||.||.. -+ .|.+-++.. .|-+++.++...-.....+|.
T Consensus 158 ~~~Ye~A~eLGr~LA~~G~~LVtGGG~G--lMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~E~~N~ 224 (460)
T 3bq9_A 158 EIEYKYTKDVGYHIGLRGLNICTGCGPG--AMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAAEPPNP 224 (460)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEECCSSG--GGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTTSCCCT
T ss_pred CHHHHHHHHHHHHHHHCCCEEEeCCcHH--HhhHHHhhHHhhcccccCCCCEEEEEeChhhhhhhhcCC
Confidence 3445555556665554445677766653 55 444444444 478899997432122344454
Done!