Query 020510
Match_columns 325
No_of_seqs 155 out of 1527
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 04:03:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020510.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020510hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ozl_B PDHE1-B, pyruvate dehyd 100.0 2.7E-62 9.1E-67 466.4 24.7 286 33-318 11-297 (341)
2 1w85_B Pyruvate dehydrogenase 100.0 9.2E-62 3.2E-66 460.0 24.1 280 36-318 2-281 (324)
3 1umd_B E1-beta, 2-OXO acid deh 100.0 1.5E-61 5.2E-66 458.5 24.2 281 35-318 2-282 (324)
4 1ik6_A Pyruvate dehydrogenase; 100.0 2.5E-60 8.4E-65 457.1 23.0 278 35-318 49-326 (369)
5 2bfd_B 2-oxoisovalerate dehydr 100.0 1.4E-59 4.8E-64 448.0 23.0 288 25-318 10-300 (342)
6 1qs0_B 2-oxoisovalerate dehydr 100.0 1.8E-58 6.1E-63 439.9 23.1 281 34-318 2-296 (338)
7 3mos_A Transketolase, TK; thia 100.0 1.8E-51 6E-56 418.9 27.0 268 27-317 304-578 (616)
8 2o1x_A 1-deoxy-D-xylulose-5-ph 100.0 2E-50 6.9E-55 412.7 24.6 258 36-318 321-581 (629)
9 2o1s_A 1-deoxy-D-xylulose-5-ph 100.0 6.2E-50 2.1E-54 408.7 24.7 259 35-318 317-578 (621)
10 3l84_A Transketolase; TKT, str 100.0 1.8E-46 6E-51 382.0 20.1 249 35-307 336-594 (632)
11 3m49_A Transketolase; alpha-be 100.0 1.7E-46 6E-51 385.0 18.5 258 28-304 371-646 (690)
12 3rim_A Transketolase, TK; TPP, 100.0 4.8E-46 1.7E-50 381.6 19.9 268 27-317 365-662 (700)
13 3uk1_A Transketolase; structur 100.0 6E-46 2E-50 381.9 18.3 256 34-309 392-670 (711)
14 1gpu_A Transketolase; transfer 100.0 7.1E-46 2.4E-50 381.6 18.1 259 29-309 348-627 (680)
15 2r8o_A Transketolase 1, TK 1; 100.0 1.7E-45 6E-50 378.2 17.4 256 33-309 351-623 (669)
16 1itz_A Transketolase; calvin c 100.0 9.4E-45 3.2E-49 373.0 22.3 260 29-309 358-636 (675)
17 3kom_A Transketolase; rossmann 100.0 7.4E-45 2.5E-49 372.0 20.1 254 34-307 352-620 (663)
18 2e6k_A Transketolase; structur 100.0 2.7E-45 9.2E-50 375.8 14.9 255 34-309 346-614 (651)
19 1r9j_A Transketolase; domains, 100.0 4.1E-45 1.4E-49 375.3 15.2 254 34-309 349-618 (673)
20 2jgd_A 2-oxoglutarate dehydrog 100.0 6.3E-44 2.1E-48 374.9 21.6 274 35-318 589-894 (933)
21 2yic_A 2-oxoglutarate decarbox 100.0 1.5E-43 5.3E-48 370.0 18.0 265 42-315 520-827 (868)
22 2xt6_A 2-oxoglutarate decarbox 100.0 4.6E-42 1.6E-46 366.7 19.7 259 48-315 773-1072(1113)
23 2qtc_A Pyruvate dehydrogenase 100.0 1.2E-38 4.1E-43 333.7 21.1 265 34-314 489-816 (886)
24 3ahc_A Phosphoketolase, xylulo 100.0 5.2E-36 1.8E-40 309.4 17.0 264 36-316 428-743 (845)
25 1yd7_A 2-keto acid:ferredoxin 99.9 8.1E-28 2.8E-32 233.0 11.3 260 35-315 21-366 (395)
26 2c42_A Pyruvate-ferredoxin oxi 99.8 2.9E-19 1E-23 193.3 24.4 261 36-314 6-348 (1231)
27 3ju3_A Probable 2-oxoacid ferr 99.6 7.1E-16 2.4E-20 124.6 9.1 78 236-314 11-88 (118)
28 1v5e_A Pyruvate oxidase; oxido 94.3 0.2 6.7E-06 50.2 10.4 149 36-209 3-165 (590)
29 2uz1_A Benzaldehyde lyase; thi 93.1 1.2 4E-05 44.1 13.5 152 36-208 3-164 (563)
30 1ozh_A ALS, acetolactate synth 92.9 0.84 2.9E-05 45.3 12.2 151 37-208 11-170 (566)
31 1ybh_A Acetolactate synthase, 92.7 1 3.6E-05 44.8 12.6 153 36-208 11-172 (590)
32 2wvg_A PDC, pyruvate decarboxy 92.3 2.7 9.2E-05 41.6 14.8 152 37-208 3-169 (568)
33 2pan_A Glyoxylate carboligase; 92.1 1.7 5.7E-05 43.6 13.1 152 37-208 27-188 (616)
34 3eya_A Pyruvate dehydrogenase 92.0 2.6 9E-05 41.5 14.3 152 37-208 3-162 (549)
35 2vbi_A Pyruvate decarboxylase; 91.9 2.6 8.8E-05 41.7 14.2 151 37-208 3-169 (566)
36 2iht_A Carboxyethylarginine sy 91.3 1.2 4.1E-05 44.2 11.1 152 36-209 11-172 (573)
37 1q6z_A BFD, BFDC, benzoylforma 91.3 0.8 2.7E-05 44.9 9.6 150 38-209 3-162 (528)
38 2nxw_A Phenyl-3-pyruvate decar 91.1 5.4 0.00018 39.4 15.5 154 36-210 20-188 (565)
39 2pgn_A Cyclohexane-1,2-dione h 90.1 1.9 6.4E-05 43.0 11.2 153 36-208 3-165 (589)
40 4feg_A Pyruvate oxidase; carba 89.5 3.6 0.00012 41.1 12.7 155 35-208 9-171 (603)
41 1t9b_A Acetolactate synthase, 89.5 3 0.0001 42.4 12.3 149 37-208 82-242 (677)
42 2vk8_A Pyruvate decarboxylase 89.3 4.5 0.00015 39.8 13.2 154 36-209 3-171 (563)
43 2q28_A Oxalyl-COA decarboxylas 89.0 5.3 0.00018 39.3 13.5 154 35-209 6-170 (564)
44 2c31_A Oxalyl-COA decarboxylas 88.9 4.8 0.00016 39.7 13.1 154 35-209 8-172 (568)
45 3lq1_A 2-succinyl-5-enolpyruvy 87.6 1.9 6.6E-05 42.7 9.3 147 43-207 13-177 (578)
46 3hww_A 2-succinyl-5-enolpyruvy 87.5 3 0.0001 41.1 10.6 148 42-207 9-170 (556)
47 1t9b_A Acetolactate synthase, 85.8 3.6 0.00012 41.8 10.2 149 41-204 464-632 (677)
48 1ovm_A Indole-3-pyruvate decar 85.3 6.1 0.00021 38.7 11.5 153 36-208 4-170 (552)
49 2vbf_A Branched-chain alpha-ke 85.0 4.6 0.00016 39.9 10.4 150 37-208 25-190 (570)
50 2x7j_A 2-succinyl-5-enolpyruvy 82.3 7.6 0.00026 38.6 10.8 148 43-208 33-198 (604)
51 2lqo_A Putative glutaredoxin R 77.1 1.6 5.3E-05 32.6 2.9 73 240-317 5-83 (92)
52 3g8r_A Probable spore coat pol 73.6 11 0.00039 35.0 8.4 82 241-322 137-225 (350)
53 3rpe_A MDAB, modulator of drug 72.7 18 0.00061 31.2 9.0 60 251-313 47-106 (218)
54 3eya_A Pyruvate dehydrogenase 70.8 13 0.00044 36.5 8.5 111 83-204 396-524 (549)
55 2vzf_A NADH-dependent FMN redu 70.2 9.2 0.00031 31.9 6.4 67 247-314 16-93 (197)
56 4feg_A Pyruvate oxidase; carba 69.4 12 0.00039 37.3 7.9 111 83-204 410-541 (603)
57 3zyw_A Glutaredoxin-3; metal b 68.9 7.1 0.00024 29.7 5.0 65 238-307 15-87 (111)
58 2q62_A ARSH; alpha/beta, flavo 68.2 15 0.00051 32.3 7.6 73 240-314 36-122 (247)
59 2c31_A Oxalyl-COA decarboxylas 68.0 13 0.00043 36.6 7.9 111 83-204 416-542 (568)
60 3ipz_A Monothiol glutaredoxin- 67.5 4.6 0.00016 30.6 3.6 70 238-309 17-91 (109)
61 1sqs_A Conserved hypothetical 67.5 13 0.00045 32.0 7.0 67 247-314 15-103 (242)
62 3m49_A Transketolase; alpha-be 67.4 22 0.00075 36.2 9.6 84 110-205 174-269 (690)
63 3uk1_A Transketolase; structur 66.5 15 0.0005 37.6 8.1 85 109-205 188-283 (711)
64 3fni_A Putative diflavin flavo 66.5 13 0.00044 30.1 6.4 49 246-296 15-63 (159)
65 1ozh_A ALS, acetolactate synth 66.2 14 0.00048 36.3 7.8 111 83-204 410-538 (566)
66 2wqp_A Polysialic acid capsule 66.1 20 0.00068 33.4 8.2 81 240-322 149-236 (349)
67 1ybh_A Acetolactate synthase, 66.1 8.4 0.00029 38.1 6.1 111 83-204 416-553 (590)
68 2a5l_A Trp repressor binding p 65.9 14 0.00049 30.3 6.8 69 246-315 16-96 (200)
69 1vli_A Spore coat polysacchari 64.5 22 0.00075 33.5 8.3 82 240-322 159-248 (385)
70 2o1s_A 1-deoxy-D-xylulose-5-ph 64.0 24 0.00082 35.2 9.1 26 180-205 255-280 (621)
71 1aba_A Glutaredoxin; electron 63.6 9.9 0.00034 27.0 4.6 60 249-308 13-82 (87)
72 3hly_A Flavodoxin-like domain; 63.6 13 0.00043 30.1 5.8 50 246-298 11-60 (161)
73 3f2v_A General stress protein 62.3 23 0.00078 29.8 7.4 60 253-313 19-81 (192)
74 3u7r_A NADPH-dependent FMN red 62.2 14 0.00049 31.0 6.0 65 248-313 16-90 (190)
75 3lyu_A Putative hydrogenase; t 62.0 12 0.00041 29.6 5.3 48 238-285 18-66 (142)
76 4dik_A Flavoprotein; TM0755, e 61.9 15 0.00051 34.8 6.7 71 242-313 268-342 (410)
77 2amj_A Modulator of drug activ 61.9 23 0.00078 29.8 7.4 60 251-313 34-93 (204)
78 3l84_A Transketolase; TKT, str 61.3 16 0.00054 36.8 7.1 98 96-205 119-238 (632)
79 1t0i_A YLR011WP; FMN binding p 61.2 21 0.00072 29.2 6.9 67 247-314 14-108 (191)
80 1v5e_A Pyruvate oxidase; oxido 60.4 28 0.00096 34.4 8.7 110 83-204 403-534 (590)
81 2uz1_A Benzaldehyde lyase; thi 59.8 24 0.00083 34.5 8.1 110 83-204 409-541 (563)
82 2fzv_A Putative arsenical resi 59.5 16 0.00055 32.8 6.2 74 239-313 59-146 (279)
83 3l78_A Regulatory protein SPX; 59.4 16 0.00055 28.2 5.4 43 247-290 7-49 (120)
84 3fz4_A Putative arsenate reduc 59.0 14 0.00049 28.5 5.1 44 247-291 10-53 (120)
85 2o1x_A 1-deoxy-D-xylulose-5-ph 58.9 28 0.00094 34.9 8.4 26 180-205 260-285 (629)
86 2x5n_A SPRPN10, 26S proteasome 58.3 43 0.0015 27.9 8.4 49 250-300 121-174 (192)
87 3lq1_A 2-succinyl-5-enolpyruvy 58.0 20 0.00067 35.4 7.1 36 168-204 520-555 (578)
88 1wik_A Thioredoxin-like protei 57.4 10 0.00034 28.4 3.8 67 238-306 14-85 (109)
89 5nul_A Flavodoxin; electron tr 57.1 15 0.0005 28.4 4.9 30 246-275 9-38 (138)
90 2wci_A Glutaredoxin-4; redox-a 57.1 13 0.00045 29.4 4.6 67 239-307 35-106 (135)
91 2wem_A Glutaredoxin-related pr 56.8 17 0.00057 28.0 5.1 65 238-307 19-92 (118)
92 2e6k_A Transketolase; structur 56.7 38 0.0013 34.0 9.1 85 109-205 151-246 (651)
93 3hww_A 2-succinyl-5-enolpyruvy 56.3 17 0.0006 35.5 6.4 36 168-204 499-534 (556)
94 2q28_A Oxalyl-COA decarboxylas 55.8 17 0.00056 35.7 6.1 111 83-204 411-539 (564)
95 1rw1_A Conserved hypothetical 55.3 12 0.00042 28.5 4.1 44 247-291 7-50 (114)
96 2pan_A Glyoxylate carboligase; 53.7 31 0.001 34.2 7.7 111 83-204 432-575 (616)
97 3gkx_A Putative ARSC family re 53.4 13 0.00044 28.8 3.9 44 247-291 11-54 (120)
98 1r9j_A Transketolase; domains, 53.2 76 0.0026 32.0 10.6 84 110-205 150-246 (673)
99 2x7j_A 2-succinyl-5-enolpyruvy 52.4 7.4 0.00025 38.7 2.9 99 95-204 459-575 (604)
100 3kkj_A Amine oxidase, flavin-c 52.3 12 0.00042 30.6 4.0 31 239-272 3-33 (336)
101 3rdw_A Putative arsenate reduc 51.6 15 0.0005 28.5 4.0 44 247-291 12-55 (121)
102 3q2o_A Phosphoribosylaminoimid 51.1 62 0.0021 29.7 9.0 75 237-319 13-100 (389)
103 1q6z_A BFD, BFDC, benzoylforma 50.7 28 0.00096 33.7 6.8 111 83-204 392-520 (528)
104 2kok_A Arsenate reductase; bru 50.7 18 0.00061 27.8 4.4 49 241-291 7-55 (120)
105 3l4e_A Uncharacterized peptida 50.4 19 0.00064 30.7 4.8 54 238-294 27-84 (206)
106 1z3e_A Regulatory protein SPX; 49.6 36 0.0012 26.5 6.1 48 241-290 3-50 (132)
107 1ydg_A Trp repressor binding p 49.3 17 0.00058 30.4 4.4 69 246-315 17-103 (211)
108 2zki_A 199AA long hypothetical 49.3 32 0.0011 28.2 6.1 68 246-315 14-95 (199)
109 3kom_A Transketolase; rossmann 48.8 53 0.0018 33.2 8.6 85 109-205 149-245 (663)
110 3hh1_A Tetrapyrrole methylase 48.0 9.2 0.00032 29.3 2.2 35 236-270 77-114 (117)
111 3f6r_A Flavodoxin; FMN binding 47.9 31 0.0011 26.8 5.6 62 246-314 12-76 (148)
112 2iht_A Carboxyethylarginine sy 47.3 55 0.0019 32.0 8.4 111 83-204 426-556 (573)
113 1ovm_A Indole-3-pyruvate decar 47.3 45 0.0015 32.4 7.7 111 83-204 398-527 (552)
114 2fz5_A Flavodoxin; alpha/beta 47.1 29 0.00099 26.3 5.2 44 247-297 11-54 (137)
115 3lrx_A Putative hydrogenase; a 47.0 25 0.00086 28.2 4.9 50 237-286 22-72 (158)
116 1itz_A Transketolase; calvin c 46.8 69 0.0024 32.3 9.1 85 110-205 161-257 (675)
117 3fvw_A Putative NAD(P)H-depend 46.7 41 0.0014 27.8 6.4 62 250-313 19-90 (192)
118 3llv_A Exopolyphosphatase-rela 45.8 61 0.0021 24.7 6.9 32 238-272 6-37 (141)
119 3jx9_A Putative phosphoheptose 45.1 58 0.002 26.8 6.9 126 183-314 23-155 (170)
120 3f0i_A Arsenate reductase; str 44.9 13 0.00044 28.8 2.7 44 247-291 11-54 (119)
121 1rtt_A Conserved hypothetical 44.1 13 0.00046 30.6 2.8 61 251-313 24-95 (193)
122 2wvg_A PDC, pyruvate decarboxy 43.8 52 0.0018 32.1 7.6 28 177-204 508-536 (568)
123 2vbi_A Pyruvate decarboxylase; 42.9 41 0.0014 32.9 6.6 28 177-204 500-528 (566)
124 1cfz_A Hydrogenase 2 maturatio 42.2 52 0.0018 26.7 6.1 56 240-299 2-64 (162)
125 1t5b_A Acyl carrier protein ph 42.1 67 0.0023 26.0 7.0 66 247-313 16-109 (201)
126 2ab1_A Hypothetical protein; H 41.5 8.2 0.00028 30.3 1.0 39 235-273 58-98 (122)
127 1f4p_A Flavodoxin; electron tr 40.8 40 0.0014 26.1 5.1 30 247-276 12-41 (147)
128 2e85_A Hydrogenase 3 maturatio 40.0 62 0.0021 26.2 6.3 55 240-298 5-66 (159)
129 3rim_A Transketolase, TK; TPP, 39.6 74 0.0025 32.3 8.0 85 110-205 170-265 (700)
130 2ark_A Flavodoxin; FMN, struct 39.6 49 0.0017 27.0 5.7 61 246-314 15-76 (188)
131 2pgn_A Cyclohexane-1,2-dione h 39.4 13 0.00046 36.7 2.4 111 83-204 414-542 (589)
132 2vbf_A Branched-chain alpha-ke 39.1 69 0.0023 31.3 7.6 27 178-204 519-546 (570)
133 3nzn_A Glutaredoxin; structura 38.6 31 0.0011 25.2 3.9 68 239-307 22-94 (103)
134 1fov_A Glutaredoxin 3, GRX3; a 37.9 61 0.0021 21.8 5.2 70 241-314 3-73 (82)
135 3tem_A Ribosyldihydronicotinam 37.9 49 0.0017 28.3 5.6 64 249-313 17-115 (228)
136 3gx8_A Monothiol glutaredoxin- 37.7 23 0.00078 27.2 3.1 64 238-307 15-90 (121)
137 2hpv_A FMN-dependent NADH-azor 37.0 73 0.0025 26.2 6.5 65 248-313 18-117 (208)
138 3k5i_A Phosphoribosyl-aminoimi 36.9 1.6E+02 0.0055 27.1 9.5 69 238-315 24-107 (403)
139 2ct6_A SH3 domain-binding glut 36.9 42 0.0014 25.1 4.5 62 240-307 9-88 (111)
140 2yan_A Glutaredoxin-3; oxidore 36.7 35 0.0012 25.0 3.9 69 239-309 17-90 (105)
141 1id1_A Putative potassium chan 36.7 1E+02 0.0036 23.8 7.1 32 239-273 4-35 (153)
142 3h8q_A Thioredoxin reductase 3 36.2 1E+02 0.0034 22.9 6.6 67 238-308 16-87 (114)
143 1s3c_A Arsenate reductase; ARS 35.8 27 0.00094 27.7 3.3 43 247-290 9-51 (141)
144 2fvt_A Conserved hypothetical 35.7 12 0.00042 29.8 1.2 36 238-273 67-103 (135)
145 3fwz_A Inner membrane protein 35.6 1.1E+02 0.0039 23.3 7.1 32 239-273 8-39 (140)
146 2q9u_A A-type flavoprotein; fl 35.6 93 0.0032 28.6 7.6 63 247-313 268-330 (414)
147 2fi9_A Outer membrane protein; 35.4 13 0.00044 29.3 1.3 36 238-273 68-104 (128)
148 1w85_A Pyruvate dehydrogenase 35.2 53 0.0018 30.5 5.7 33 172-205 227-263 (368)
149 1ycg_A Nitric oxide reductase; 34.9 54 0.0019 29.9 5.8 53 242-297 254-310 (398)
150 1t1v_A SH3BGRL3, SH3 domain-bi 34.9 33 0.0011 24.5 3.5 57 254-313 22-81 (93)
151 2ohh_A Type A flavoprotein FPR 34.8 72 0.0025 29.1 6.6 63 247-313 268-330 (404)
152 1e5d_A Rubredoxin\:oxygen oxid 34.5 1E+02 0.0035 28.0 7.6 70 239-313 253-326 (402)
153 3r6w_A FMN-dependent NADH-azor 34.5 1.2E+02 0.0042 25.0 7.6 64 249-313 18-110 (212)
154 1gpu_A Transketolase; transfer 34.4 89 0.0031 31.5 7.6 84 110-205 150-246 (680)
155 3b6i_A Flavoprotein WRBA; flav 34.4 59 0.002 26.4 5.4 67 246-315 12-93 (198)
156 2r8o_A Transketolase 1, TK 1; 34.4 1E+02 0.0035 31.0 8.0 84 110-205 148-243 (669)
157 3hr4_A Nitric oxide synthase, 34.4 31 0.0011 29.7 3.7 36 240-275 41-79 (219)
158 3mos_A Transketolase, TK; thia 34.1 1.3E+02 0.0046 29.8 8.8 97 96-205 126-238 (616)
159 3ic4_A Glutaredoxin (GRX-1); s 33.9 28 0.00095 24.5 2.9 72 240-313 13-90 (92)
160 4bby_A Alkyldihydroxyacetoneph 33.9 2.1E+02 0.0072 28.5 10.3 91 169-264 201-295 (658)
161 2gm2_A Conserved hypothetical 33.7 12 0.00042 29.7 0.9 38 236-273 62-100 (132)
162 1ijb_A VON willebrand factor; 33.5 48 0.0016 27.3 4.7 45 252-298 134-180 (202)
163 1v95_A Nuclear receptor coacti 32.6 1.1E+02 0.0037 24.1 6.3 59 239-298 9-69 (130)
164 3pu6_A Uncharacterized protein 31.5 94 0.0032 25.0 6.0 55 240-298 4-64 (157)
165 4hs4_A Chromate reductase; tri 31.4 86 0.0029 26.1 6.0 60 252-313 25-96 (199)
166 4e4t_A Phosphoribosylaminoimid 31.3 1.3E+02 0.0045 28.0 7.9 75 237-319 34-121 (419)
167 2nxw_A Phenyl-3-pyruvate decar 30.3 43 0.0015 32.8 4.4 144 41-203 377-536 (565)
168 4b4t_W RPN10, 26S proteasome r 30.2 1.9E+02 0.0065 25.5 8.3 50 250-300 122-178 (268)
169 3aw8_A PURK, phosphoribosylami 30.2 1.4E+02 0.0049 26.8 7.8 51 241-294 2-64 (369)
170 3cpk_A Uncharacterized protein 30.2 19 0.00064 29.4 1.4 36 238-273 88-124 (150)
171 3orq_A N5-carboxyaminoimidazol 30.1 93 0.0032 28.5 6.5 58 237-298 11-81 (377)
172 3ax6_A Phosphoribosylaminoimid 29.9 1.8E+02 0.0062 26.2 8.5 54 240-297 3-69 (380)
173 3l9w_A Glutathione-regulated p 29.5 1E+02 0.0036 28.9 6.8 56 238-296 4-75 (413)
174 1n3y_A Integrin alpha-X; alpha 29.4 59 0.002 26.3 4.5 61 254-314 130-194 (198)
175 1nh9_A MJA10B, DNA-binding pro 28.7 86 0.0029 22.8 4.7 41 236-276 24-67 (87)
176 2ywl_A Thioredoxin reductase r 28.7 59 0.002 25.8 4.3 31 240-273 3-33 (180)
177 4a5l_A Thioredoxin reductase; 28.6 1.1E+02 0.0037 26.4 6.4 48 237-287 151-198 (314)
178 3oz2_A Digeranylgeranylglycero 28.4 43 0.0015 29.9 3.8 30 240-272 6-35 (397)
179 3mcu_A Dipicolinate synthase, 28.4 34 0.0011 29.3 2.8 39 238-276 5-45 (207)
180 2bmv_A Flavodoxin; electron tr 28.4 78 0.0027 25.0 5.0 30 243-273 5-35 (164)
181 2c42_A Pyruvate-ferredoxin oxi 28.3 2.4E+02 0.0081 30.6 10.0 38 167-204 1025-1065(1231)
182 4hqo_A Sporozoite surface prot 28.1 65 0.0022 28.0 4.8 68 241-313 129-203 (266)
183 3n2n_F Anthrax toxin receptor 27.9 27 0.00094 28.0 2.1 55 241-298 110-168 (185)
184 1efp_B ETF, protein (electron 27.3 1.9E+02 0.0065 25.1 7.7 9 240-248 57-65 (252)
185 4gi5_A Quinone reductase; prot 27.1 1E+02 0.0035 27.4 6.0 63 250-313 39-135 (280)
186 2bfd_A 2-oxoisovalerate dehydr 27.0 77 0.0026 29.8 5.3 31 175-205 247-283 (400)
187 1edz_A 5,10-methylenetetrahydr 26.9 91 0.0031 28.4 5.6 57 237-295 176-251 (320)
188 2khp_A Glutaredoxin; thioredox 26.5 1.1E+02 0.0037 21.2 5.1 70 240-313 7-77 (92)
189 4hqf_A Thrombospondin-related 26.5 89 0.003 27.2 5.5 57 241-299 132-195 (281)
190 1atz_A VON willebrand factor; 26.5 39 0.0013 27.4 2.9 55 242-298 113-169 (189)
191 1shu_X Anthrax toxin receptor 26.2 74 0.0025 25.2 4.5 45 251-298 121-165 (182)
192 3phc_A Purine nucleoside phosp 25.6 1.8E+02 0.0062 25.6 7.3 73 177-273 19-91 (275)
193 3tnl_A Shikimate dehydrogenase 25.5 1E+02 0.0036 27.8 5.8 33 238-273 154-187 (315)
194 3lcm_A SMU.1420, putative oxid 25.0 1E+02 0.0034 25.4 5.2 62 250-313 17-96 (196)
195 3qmx_A Glutaredoxin A, glutare 24.8 75 0.0026 23.1 3.9 71 239-313 16-88 (99)
196 1d4a_A DT-diaphorase, quinone 24.8 1.2E+02 0.0041 26.5 6.0 64 249-313 18-116 (273)
197 1ykg_A SIR-FP, sulfite reducta 24.8 69 0.0023 25.6 4.0 28 247-274 21-48 (167)
198 3pm9_A Putative oxidoreductase 24.8 2.1E+02 0.0071 27.3 8.1 84 173-265 51-138 (476)
199 3nnk_A Ureidoglycine-glyoxylat 24.8 2E+02 0.0067 25.7 7.7 22 279-300 156-177 (411)
200 1uxy_A MURB, uridine diphospho 24.3 2.3E+02 0.0078 25.8 7.9 75 177-257 17-94 (340)
201 2l69_A Rossmann 2X3 fold prote 24.0 1.9E+02 0.0064 21.5 5.8 48 241-291 3-50 (134)
202 3ndc_A Precorrin-4 C(11)-methy 24.0 36 0.0012 30.0 2.3 108 175-298 51-169 (264)
203 3mb8_A Purine nucleoside phosp 23.4 2.1E+02 0.0073 25.2 7.4 73 177-273 23-95 (279)
204 3le1_A Phosphotransferase syst 23.2 93 0.0032 22.5 4.1 30 235-264 55-84 (88)
205 3k1y_A Oxidoreductase; structu 23.2 1.3E+02 0.0043 25.0 5.5 54 259-313 41-108 (191)
206 4gcm_A TRXR, thioredoxin reduc 22.4 83 0.0028 27.4 4.4 30 240-272 8-37 (312)
207 3vax_A Putative uncharacterize 22.4 1.5E+02 0.005 26.5 6.3 24 278-301 176-199 (400)
208 3od1_A ATP phosphoribosyltrans 22.3 1.8E+02 0.0063 27.0 7.0 57 240-302 338-395 (400)
209 2aef_A Calcium-gated potassium 22.3 74 0.0025 26.7 3.9 54 239-296 10-78 (234)
210 2e0n_A Precorrin-2 C20-methylt 22.0 44 0.0015 29.1 2.4 20 281-300 164-183 (259)
211 2qbu_A Precorrin-2 methyltrans 21.9 44 0.0015 28.3 2.4 32 282-317 161-192 (232)
212 3rhb_A ATGRXC5, glutaredoxin-C 21.9 1.2E+02 0.004 22.2 4.6 67 239-308 19-90 (113)
213 3l4b_C TRKA K+ channel protien 21.9 2E+02 0.0068 23.6 6.6 30 240-272 2-31 (218)
214 2y3s_A TAML; oxidoreductase; H 21.6 3.3E+02 0.011 26.3 9.0 80 173-258 58-140 (530)
215 3p0r_A Azoreductase; structura 21.5 2E+02 0.007 23.8 6.6 64 249-313 22-115 (211)
216 3kgw_A Alanine-glyoxylate amin 21.5 2.4E+02 0.0081 24.8 7.5 22 279-300 166-187 (393)
217 3en0_A Cyanophycinase; serine 21.4 85 0.0029 28.2 4.3 70 239-315 57-130 (291)
218 2lnd_A De novo designed protei 21.4 1.2E+02 0.004 21.9 4.1 35 171-205 24-58 (112)
219 3svl_A Protein YIEF; E. coli C 21.4 76 0.0026 26.3 3.7 63 250-313 20-95 (193)
220 1hsk_A UDP-N-acetylenolpyruvoy 21.3 78 0.0027 28.7 4.1 29 177-205 51-79 (326)
221 1xhc_A NADH oxidase /nitrite r 21.1 1.3E+02 0.0045 27.2 5.7 51 237-290 142-196 (367)
222 3tx1_A UDP-N-acetylenolpyruvoy 21.0 88 0.003 28.4 4.3 29 177-205 57-85 (322)
223 3e96_A Dihydrodipicolinate syn 20.9 1.6E+02 0.0054 26.5 6.0 30 242-271 84-113 (316)
224 3d0c_A Dihydrodipicolinate syn 20.9 1.8E+02 0.0061 26.1 6.4 41 242-282 84-124 (314)
225 2gqw_A Ferredoxin reductase; f 20.9 1.4E+02 0.0049 27.4 5.9 51 237-290 144-200 (408)
226 3ha2_A NADPH-quinone reductase 20.7 2.3E+02 0.008 23.0 6.6 46 265-313 29-74 (177)
227 3ngx_A Bifunctional protein fo 20.6 83 0.0028 28.1 3.9 50 237-294 149-198 (276)
228 2dwc_A PH0318, 433AA long hypo 20.5 3.7E+02 0.013 24.6 8.9 48 239-289 20-80 (433)
229 1wyz_A Putative S-adenosylmeth 20.5 47 0.0016 28.6 2.3 10 236-245 81-90 (242)
230 3ibs_A Conserved hypothetical 20.5 1.2E+02 0.004 24.8 4.8 58 241-298 115-197 (218)
231 2ejb_A Probable aromatic acid 20.4 1.2E+02 0.0042 25.2 4.8 33 240-272 3-36 (189)
232 3isl_A Purine catabolism prote 20.3 2.8E+02 0.0097 24.6 7.8 24 278-301 153-176 (416)
233 3i16_A Aluminum resistance pro 20.2 75 0.0025 30.0 3.8 37 266-302 176-223 (427)
234 2q0l_A TRXR, thioredoxin reduc 20.2 1.7E+02 0.006 25.0 6.1 48 237-287 142-189 (311)
235 2bfw_A GLGA glycogen synthase; 20.1 2E+02 0.0069 22.6 6.1 45 271-318 96-141 (200)
236 3pp8_A Glyoxylate/hydroxypyruv 20.1 2.4E+02 0.0083 25.3 7.1 54 237-294 138-198 (315)
No 1
>2ozl_B PDHE1-B, pyruvate dehydrogenase E1 component subunit beta; pyruvate_dehydrogenase_complex, human, multienzyme_complex_component; HET: TPP; 1.90A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1ni4_B* 3exe_B* 3exf_B* 3exg_B 3exh_B* 3exi_B
Probab=100.00 E-value=2.7e-62 Score=466.44 Aligned_cols=286 Identities=62% Similarity=1.025 Sum_probs=259.7
Q ss_pred ccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEE
Q 020510 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVV 112 (325)
Q Consensus 33 ~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v 112 (325)
++++++++++|+++|.+++++|++|+++++|++.++++|..+.+|.++|||+||||+||+|++|+++|+|+|++|+|||+
T Consensus 11 ~~~~~~~~~a~~~~L~~l~~~~~~vv~~~~D~~~~g~~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rp~~ 90 (341)
T 2ozl_B 11 GSLQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPIC 90 (341)
T ss_dssp -CCEEEHHHHHHHHHHHHHHHCTTEEEEETTSSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEE
T ss_pred CcccccHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEE
Confidence 34789999999999999999999999999999876777777789999999999999999999999999999999999999
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
++++++|++|++|||++++|+++||+||.+++|++++.++|..+++|+||||.+|++|+++|||+|++|+|++|++.+++
T Consensus 91 ~~~f~~F~~~a~dqi~~~~a~~~y~~~g~~~~pvv~~~~~G~~g~~G~tHs~~~ea~l~~iP~l~V~~Psd~~e~~~~l~ 170 (341)
T 2ozl_B 91 EFMTFNFSMQAIDQVINSAAKTYYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIK 170 (341)
T ss_dssp ECSSGGGGGGGHHHHHTTTTTHHHHTTSSCCCCCEEEEECSCCSSCCGGGCCCCHHHHHTSTTCEEECCCSHHHHHHHHH
T ss_pred EeccHHHHHHHHHHHHHHHHHHHhhccccCCCCEEEEEcCcCCCCCCcchhhHHHHHhccCCCCEEEEeCCHHHHHHHHH
Confidence 96558889999999999999999999999999999998877556699999888889999999999999999999999999
Q ss_pred HhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 193 AAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 193 ~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
+|++.++|++||++|.+|+.+.+..+.++++++.+++|+++++++|.|++||++|+++..+++|++.|+++|++++|||+
T Consensus 171 ~a~~~~~Pv~i~~~~~~~~~~~~v~p~~~~~~~~~~~Gk~~v~~~g~dv~iia~Gs~~~~a~~Aa~~L~~~Gi~v~vv~~ 250 (341)
T 2ozl_B 171 SAIRDNNPVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINM 250 (341)
T ss_dssp HHHHSSSCEEEEECHHHHTCEEECCHHHHSTTCCCCTTCCEEEECCSSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred HHHhcCCCEEEEEChhhhcCCCCcCCccCCccccccCCceEEeccCCCEEEEEeCHHHHHHHHHHHHHHhcCCCeEEEee
Confidence 99999999999999876543211112234556778899999999999999999999999999999999999999999999
Q ss_pred eeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcC-CCc
Q 020510 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFP-PAW 318 (325)
Q Consensus 273 ~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~-~~~ 318 (325)
++++|||.+.|.++++++++|||+|||...||+|++|++++.+ +++
T Consensus 251 ~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~Gg~g~~v~~~l~~~~~~ 297 (341)
T 2ozl_B 251 RTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAF 297 (341)
T ss_dssp CEEETCCHHHHHHHHHHHSCEEEECSSCSTTCHHHHHHHHHHHSTTG
T ss_pred eeecCCCHHHHHHHHhcCCeEEEEecCcccCcHHHHHHHHHHhhhcc
Confidence 9999999999999999999999999999999999999999988 765
No 2
>1w85_B Pyruvate dehydrogenase E1 component, beta subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1w88_B* 3dva_B* 3dv0_B* 3duf_B*
Probab=100.00 E-value=9.2e-62 Score=460.02 Aligned_cols=280 Identities=42% Similarity=0.684 Sum_probs=256.2
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEecc
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFM 115 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~~~ 115 (325)
++++|++|+++|.+++++|++|+++++|++.++|+|+.+.+|+++|||+||+|+||+|++|+++|+|+|++|+|||++++
T Consensus 2 ~~~~~~a~~~~L~~l~~~~~~vv~~~~d~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~rp~~~~t 81 (324)
T 1w85_B 2 QMTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQ 81 (324)
T ss_dssp EECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEBCS
T ss_pred cchHHHHHHHHHHHHHhHCcCEEEEcCcccccCCcchhHHHHHHHhCCCcEEEcchhHHHHHHHHHHHHhCCCEEEEEec
Confidence 46899999999999999999999999999988888888889999999999999999999999999999999999999854
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhH
Q 020510 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAI 195 (325)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~ 195 (325)
++.|++|++|||++++|+++|+++|++++|++++.+.|..+.+|+||+|.++++++++|||+|++|+|++|++.++++++
T Consensus 82 ~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~l~V~~Psd~~e~~~~l~~a~ 161 (324)
T 1w85_B 82 FFGFVYEVMDSICGQMARIRYRTGGRYHMPITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAI 161 (324)
T ss_dssp SGGGGGGTHHHHHTTGGGHHHHTTTSSCCCCEEEEEECSSSCCCTTSSCCCHHHHTTSTTCEEECCSSHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhhhccCCCcCCEEEEEeccCCCCCCCcccccHHHHHccCCCCEEEeeCCHHHHHHHHHHHH
Confidence 47788999999999999999999999999999987655555578889888889999999999999999999999999999
Q ss_pred hCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeec
Q 020510 196 RDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI 275 (325)
Q Consensus 196 ~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l 275 (325)
++++|+++|+++.+++... +.++++++.+++||++++++|+|++||++|++++.|++|++.|+++|++++|||++++
T Consensus 162 ~~~~Pv~i~~p~~l~r~~~---~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~l 238 (324)
T 1w85_B 162 RDNDPVIFLEHLKLYRSFR---QEVPEGEYTIPIGKADIKREGKDITIIAYGAMVHESLKAAAELEKEGISAEVVDLRTV 238 (324)
T ss_dssp HSSSCEEEEEETTTSSSCC---EECCSSCCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHHHHHTTCCEEEEECSEE
T ss_pred HcCCCEEEEechHhcCCCC---CCCCCccccccCCceEEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEeeee
Confidence 9999999999988765321 3344556678899999999999999999999999999999999999999999999999
Q ss_pred cCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 276 RPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 276 ~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
+|||++.|.+++++++++||+|||...||+|++|++++.++++
T Consensus 239 ~P~d~~~i~~~~~~~~~vvvvEe~~~~Gg~g~~v~~~l~~~~~ 281 (324)
T 1w85_B 239 QPLDIETIIGSVEKTGRAIVVQEAQRQAGIAANVVAEINERAI 281 (324)
T ss_dssp ESCCHHHHHHHHHHHSCEEEEEEEETTSSSHHHHHHHHHHHHG
T ss_pred cCCCHHHHHHHHhhCCcEEEEeCCCcCChHHHHHHHHHHhhCc
Confidence 9999999999999999999999999899999999999987654
No 3
>1umd_B E1-beta, 2-OXO acid dehydrogenase beta subunit; alpha(2)beta(2) tetramer, structural genomics; HET: TDP; 1.90A {Thermus thermophilus} SCOP: c.36.1.7 c.48.1.2 PDB: 1um9_B* 1umc_B* 1umb_B*
Probab=100.00 E-value=1.5e-61 Score=458.55 Aligned_cols=281 Identities=42% Similarity=0.677 Sum_probs=256.9
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~~ 114 (325)
+++++|++|+++|.+++++|++|+++++|++.++|+|+.+.+|+++|||+||+|+||+|++|+++|+|+|++|+|||+++
T Consensus 2 ~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A~~G~~p~~~~ 81 (324)
T 1umd_B 2 ALMTMVQALNRALDEEMAKDPRVVVLGEDVGKRGGVFLVTEGLLQKYGPDRVMDTPLSEAAIVGAALGMAAHGLRPVAEI 81 (324)
T ss_dssp CEECHHHHHHHHHHHHHHHCTTEEEEETTCSTTCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCcHHHHHHHHHHHHHhcCCCEEEECCcccccCCcchhhHHHHHHhCCCcEEECchhHHHHHHHHHHHHHCCCEEEEEe
Confidence 46789999999999999999999999999988888887778999999999999999999999999999999999999985
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHh
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a 194 (325)
+++.|++|++|||++++|+++|++|+++++|++++.+.|..+++|+||+|.++++|+++|||+|++|+|++|++.+++++
T Consensus 82 t~~~F~~~a~dqi~~~~a~~~~~~~g~~~~pvv~~~~~g~~~~~g~~hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a 161 (324)
T 1umd_B 82 QFADYIFPGFDQLVSQVAKLRYRSGGQFTAPLVVRMPSGGGVRGGHHHSQSPEAHFVHTAGLKVVAVSTPYDAKGLLKAA 161 (324)
T ss_dssp SSGGGCGGGHHHHHHTTTTHHHHTTTSSCCCCEEEEEECSSSSCGGGSSCCCHHHHHTSTTCEEEECCSHHHHHHHHHHH
T ss_pred ccHhHHHHHHHHHHHHHHHHHhhcCCCCcCCEEEEEcCCCCCCCCCccchhHHHHHhcCCCCEEEEeCCHHHHHHHHHHH
Confidence 44778899999999999999999999999999998765554556888988888999999999999999999999999999
Q ss_pred HhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee
Q 020510 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274 (325)
Q Consensus 195 ~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~ 274 (325)
+++++|+++|+++.+++... ++++++++.+++||++++++|.|++||++|++++.|++|++.|+++|++++|||+++
T Consensus 162 ~~~~~Pv~i~~p~~l~~~~~---~~~~~~~~~~~~Gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~L~~~Gi~v~vi~~~~ 238 (324)
T 1umd_B 162 IRDEDPVVFLEPKRLYRSVK---EEVPEEDYTLPIGKAALRREGKDLTLICYGTVMPEVLQAAAELAKAGVSAEVLDLRT 238 (324)
T ss_dssp HHCSSCEEEEEEGGGSSSCC---EECCSSCCCCCTTCCEEEECCSSEEEEECGGGHHHHHHHHHHHHHTTCCEEEEECCE
T ss_pred HhcCCCEEEEechHhcCCCC---CCcCCCCccccCCcceEEecCCCEEEEEecHHHHHHHHHHHHHHhcCCCEEEEEece
Confidence 99999999999988765421 344555677889999999999999999999999999999999999999999999999
Q ss_pred ccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 275 l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
++|||.+.|.+++++++++||+|||...||+|++|++++.++++
T Consensus 239 l~P~d~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~ 282 (324)
T 1umd_B 239 LMPWDYEAVMNSVAKTGRVVLVSDAPRHASFVSEVAATIAEDLL 282 (324)
T ss_dssp EETCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHG
T ss_pred ecCCCHHHHHHHHhcCCeEEEEecCCcCCCHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999987653
No 4
>1ik6_A Pyruvate dehydrogenase; E1BETA, tetramer, GXXXG, oxidoreductase; 2.00A {Pyrobaculum aerophilum} SCOP: c.36.1.7 c.48.1.2
Probab=100.00 E-value=2.5e-60 Score=457.05 Aligned_cols=278 Identities=40% Similarity=0.667 Sum_probs=228.6
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~~ 114 (325)
+++++|++|+++|.+++++|++|+++++|++.++++|+.+.+|+++|||+||||+||+|++|+++|+|+|+.|+|||+++
T Consensus 49 ~~~~~~~a~~~aL~~l~~~d~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~d~gIaE~~~v~~a~G~A~~G~rpv~~~ 128 (369)
T 1ik6_A 49 MMANMAKAINMALHEEMERDERVVVLGEDVGKKGGVFLVTEGLYERFGPERVIDTPLNEGGILGFAMGMAMAGLKPVAEI 128 (369)
T ss_dssp EEECHHHHHHHHHHHHHHHCTTEEEEEC---------CTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred CcccHHHHHHHHHHHHHccCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEECcccHHHHHHHHHHHHHCCCeeEEEe
Confidence 56789999999999999999999999999987788777778999999999999999999999999999999999999985
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHh
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAA 194 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a 194 (325)
.++.|++|++|||++++|+++|++|++.++|++++.++|...++|+||++.++++|+++|||+|++|+|++|++.++++|
T Consensus 129 tf~~Fl~~a~Dqi~~~~a~~~~~~~g~~~~pvv~~~~~gg~~g~g~~hs~~~~a~l~~iPnl~V~~Psd~~e~~~ll~~A 208 (369)
T 1ik6_A 129 QFVDFIWLGADELLNHIAKLRYRSGGNYKAPLVVRTPVGSGTRGGLYHSNSPEAIFVHTPGLVVVMPSTPYNAKGLLKAA 208 (369)
T ss_dssp CCC----CCHHHHHHHHHHHHC------CCCCEEEEEECC-----------HHHHHHTCTTCEEECCCSHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHhhCCCCCCCEEEEEeCCCCCCCCccccccHHHHHcCCCCcEEEecCCHHHHHHHHHHH
Confidence 44778899999999999999999999999999998875444457889988889999999999999999999999999999
Q ss_pred HhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee
Q 020510 195 IRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS 274 (325)
Q Consensus 195 ~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~ 274 (325)
++.++|++||+++.+++.. .+.++++++.+++|+++++++|.|++||++|++++.|++|++.|+ | +++|||+++
T Consensus 209 ~~~~~Pv~i~~p~~l~r~~---~~~v~~~~~~~~~G~~~v~~~g~dv~Iia~G~~v~~a~~Aa~~L~--G-~v~Vi~~~~ 282 (369)
T 1ik6_A 209 IRGDDPVVFLEPKILYRAP---REEVPEGDYVVEIGKARVAREGDDVTLVTYGAVVHKALEAAERVK--A-SVEVVDLQT 282 (369)
T ss_dssp HHSSSCEEEEEEGGGSSCC---CEEEECSSCCCCTTCCEEEECCSSEEEEECTTHHHHHHHHHHTSS--S-CEEEEECCE
T ss_pred HhCCCCEEEEEehhhhccC---CCCcCCCcccccCCceEEEEcCCCEEEEEeCHHHHHHHHHHHHhC--C-CeEEEeeee
Confidence 9999999999998876542 133444566788999999999999999999999999999999997 8 999999999
Q ss_pred ccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 275 IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 275 l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
++|||++.|.+++++++++||+||+...||+|++|++++.++++
T Consensus 283 l~P~d~~~i~~~~~~~~~vvvvEe~~~~GG~g~~v~~~l~~~~~ 326 (369)
T 1ik6_A 283 LNPLDFDTVLKSVSKTGRLIIAHDSPKTGGLGAEVRALVAEKAL 326 (369)
T ss_dssp EETTCHHHHHHHHHHHCCEEEEEEEESTTSHHHHHHHHHHHHSG
T ss_pred cCCCCHHHHHHHHhccCeEEEEecCCcCCcHHHHHHHHHHhhCc
Confidence 99999999999999999999999999999999999999987764
No 5
>2bfd_B 2-oxoisovalerate dehydrogenase beta subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.7 c.48.1.2 PDB: 1dtw_B* 1olu_B* 1ols_B* 1v11_B* 1v16_B* 1v1m_B* 1u5b_B* 1wci_B* 1v1r_B* 1x7x_B* 1x7w_B* 1x7z_B* 1x80_B* 2beu_B* 2bev_B* 2bew_B* 2bfb_B* 2bfc_B* 1x7y_B* 2bfe_B* ...
Probab=100.00 E-value=1.4e-59 Score=447.99 Aligned_cols=288 Identities=34% Similarity=0.592 Sum_probs=256.2
Q ss_pred ccccccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHh
Q 020510 25 SNLRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAA 104 (325)
Q Consensus 25 ~~~~~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA 104 (325)
..+++|.. ++++++|++|+++|.+++++|++|+++++|++ .+|+|+.+.+|+++|||+||+|+||+|++|+++|+|+|
T Consensus 10 ~~~~~~~~-~~~~~~~~a~~~aL~~l~~~~~~vv~~~~D~~-~~gt~~~~~~~~~~~gp~r~~~~gIaE~~~v~~a~G~A 87 (342)
T 2bfd_B 10 PEPREYGQ-TQKMNLFQSVTSALDNSLAKDPTAVIFGEDVA-FGGVFRCTVGLRDKYGKDRVFNTPLCEQGIVGFGIGIA 87 (342)
T ss_dssp ----CCSC-EEEECHHHHHHHHHHHHHHHCTTCEEEETTTT-TTCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHH
T ss_pred CCCCCCCc-cCCccHHHHHHHHHHHHHhcCCCEEEEcCccC-CCcccchHHHHHHHhCCCeEEEcCcCHHHHHHHHHHHH
Confidence 44556653 47889999999999999999999999999998 56788778899999999999999999999999999999
Q ss_pred ccCCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccC-CEEEEeCCCCCCCCCCCc-chHHHHHHhcCCCcEEEeeC
Q 020510 105 YYGLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISV-PIVFRGPNGAAAGVGAQH-SHCYAAWYASVPGLKVLSPY 182 (325)
Q Consensus 105 ~~G~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~-pvv~~~~~G~~~g~G~tH-s~~~~a~~~~iP~~~V~~P~ 182 (325)
++|+|||++++++.|++|++|||++++|+++|++|++.++ |++++.++|. .++|+|| ++.++++|+++|||+|++|+
T Consensus 88 ~~G~rp~~~~tf~~F~~~a~dqi~~~~a~~~~~~~g~~~~~pvv~~~~~~g-~~~G~th~~~~d~~~l~~iP~l~V~~Ps 166 (342)
T 2bfd_B 88 VTGATAIAEIQFADYIFPAFDQIVNEAAKYRYRSGDLFNCGSLTIRSPWGC-VGHGALYHSQSPEAFFAHCPGIKVVIPR 166 (342)
T ss_dssp HTTCCEEEECSSGGGCGGGHHHHHTTGGGHHHHTTTSSCCTTEEEEEEESC-CSSCGGGSSCCCHHHHHTSTTCEEECCS
T ss_pred HCCCeeEEEecchhHHHHHHHHHHHHHHHHHhhhcCCccCCCEEEEEecCC-CCCCcchhhHhHHHHHhcCCCcEEEeeC
Confidence 9999999985447788999999999999999999999999 9999977543 2467776 56888999999999999999
Q ss_pred CHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHh
Q 020510 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAK 262 (325)
Q Consensus 183 d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~ 262 (325)
|++|++.++++++++++|+++|+++.+++... +.++.+++.+++|+++++++|.|++||++|++++.|++|++.|++
T Consensus 167 d~~e~~~~l~~a~~~~~Pv~i~~p~~l~r~~~---~~~~~~~~~~~~G~~~v~~~g~dv~iia~G~~~~~a~~Aa~~L~~ 243 (342)
T 2bfd_B 167 SPFQAKGLLLSCIEDKNPCIFFEPKILYRAAA---EEVPIEPYNIPLSQAEVIQEGSDVTLVAWGTQVHVIREVASMAKE 243 (342)
T ss_dssp SHHHHHHHHHHHHHSSSCEEEEEEGGGTTSCC---EEEESSCCCCCSSCCEEEECCSSEEEEECTTHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEecchhcCCCC---CCCCCcccceeCCceEEeccCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 99999999999999999999999977665432 234445677889999999999999999999999999999999999
Q ss_pred c-CCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 263 E-GISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 263 ~-Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
+ |++++|||+++++|||.+.|.+++++++++||+|||...||+|++|++++.++++
T Consensus 244 ~~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~~ 300 (342)
T 2bfd_B 244 KLGVSCEVIDLRTIIPWDVDTICKSVIKTGRLLISHEAPLTGGFASEISSTVQEECF 300 (342)
T ss_dssp HHCCCEEEEECCEEESCCHHHHHHHHHHHSCEEEEEEEESTTCHHHHHHHHHHHHHG
T ss_pred hcCCCEEEEeeeecCCCCHHHHHHHHhcCCEEEEEEeCccCCcHHHHHHHHHHhhCc
Confidence 9 9999999999999999999999999999999999998899999999999987654
No 6
>1qs0_B 2-oxoisovalerate dehydrogenase beta-subunit; heterotetramer, THDP cofactor, oxidoreductase; HET: TDP; 2.40A {Pseudomonas putida} SCOP: c.36.1.7 c.48.1.2 PDB: 2bp7_B
Probab=100.00 E-value=1.8e-58 Score=439.85 Aligned_cols=281 Identities=38% Similarity=0.615 Sum_probs=251.8
Q ss_pred cccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEe
Q 020510 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVE 113 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~ 113 (325)
++++++|++|+++|.+++++|++++++++|++.++|+|+.+.+|+++|||+||||+||+|++|+++|+|+|++|+|||++
T Consensus 2 ~~~~~~~~a~~~~l~~l~~~~~~vv~~~~D~~~~~g~~~~~~~~~~~~gp~r~~~~gisE~~~~~~a~G~A~~G~rp~~~ 81 (338)
T 1qs0_B 2 TTTMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVE 81 (338)
T ss_dssp EEECCHHHHHHHHHHHHHHHCTTEEEEETTCSSSCCTTSTTTTHHHHHCTTTEEECCSCHHHHHHHHHHHHHHTCEEEEE
T ss_pred CCcchHHHHHHHHHHHHHhhCCCEEEECCcccccCCcchhHHHHHHHhCCCcEEEccccHHHHHHHHHHHHhCCCEEEEE
Confidence 35678999999999999999999999999999888888878999999999999999999999999999999999999998
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCc-chHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQH-SHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tH-s~~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
++++.|++|++|||++++|+++|++|++.++|++++.+.|. +++|++| +|+++++|+++|||+|++|+|++|++++++
T Consensus 82 ~t~~~F~~~a~dqi~~~~a~~~~~~~~~~~~pvv~~~~~~g-~~~G~th~s~~d~~~l~~iP~l~V~~Psd~~e~~~~l~ 160 (338)
T 1qs0_B 82 IQFADYFYPASDQIVSEMARLRYRSAGEFIAPLTLRMPCGG-GIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLI 160 (338)
T ss_dssp CSCGGGCGGGHHHHHTTTTTHHHHTTTSSCCCCEEEEEECC-SSSCCSSSSCCCHHHHTTSTTCEEECCCSHHHHHHHHH
T ss_pred eccHhHHHHHHHHHHHHHHHHhhhcCCCCCCCEEEEEeCCC-CCCCcccccccHHHHHhcCCCCEEEeeCCHHHHHHHHH
Confidence 54477889999999999999999999999999999986543 4567666 578899999999999999999999999999
Q ss_pred HhHhCCCcEEEEeCccccCcccC---ccc----------cccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHH
Q 020510 193 AAIRDPDPVVFLENELLYGESFP---VSA----------EVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEI 259 (325)
Q Consensus 193 ~a~~~~~Pv~ir~~~~l~~~~~p---~~~----------~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~ 259 (325)
+|+++++|++||+++.+++...+ ..+ .++++++.+++|+++++++|.|++||++|++++.|++|++.
T Consensus 161 ~A~~~~~Pv~i~~p~~l~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~g~dv~iva~G~~~~~a~~Aa~~ 240 (338)
T 1qs0_B 161 ASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVAAEE 240 (338)
T ss_dssp HHHHSSSCEEEEEEGGGSSSCCCSCSSSCCCCSTTSTTCEEESSCCCCCTTCCCEEECCSSCEEEECTTHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEchHhhcCcccccccCccchhhcccccccCCCCcccccCceeEecCCCCEEEEEeCHHHHHHHHHHHH
Confidence 99999999999998766654322 000 34445567789999999999999999999999999999997
Q ss_pred HHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 260 LAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 260 L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
+|++++|||+++++|||.+.|.++++++++++|+|||...||+|++|++++.++++
T Consensus 241 ---~Gi~v~vi~~~~l~P~d~~~i~~~~~~~~~vvvvEe~~~~gG~g~~V~~~l~~~~~ 296 (338)
T 1qs0_B 241 ---SGVDAEVIDLRSLWPLDLDTIVESVKKTGRCVVVHEATRTCGFGAELVSLVQEHCF 296 (338)
T ss_dssp ---HCCCCEEEECSEEESCCHHHHHHHHHHHSCEEEEESSCSTTSTHHHHHHHHHHHSS
T ss_pred ---cCCCEEEEeecccCCCCHHHHHHHHhcCCEEEEEecCCcCCcHHHHHHHHHHHhcc
Confidence 69999999999999999999999999999999999999999999999999987764
No 7
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=100.00 E-value=1.8e-51 Score=418.87 Aligned_cols=268 Identities=25% Similarity=0.328 Sum_probs=234.4
Q ss_pred ccccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc
Q 020510 27 LRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY 106 (325)
Q Consensus 27 ~~~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~ 106 (325)
++.|+. ++++++|++|+++|.+++++|++++++++|++.+ ++ +..|.++| |+||||+||+|++|+++|+|||+.
T Consensus 304 ~~~~~~-~~~~a~r~a~~~~L~~l~~~d~~vv~~~aD~~~~--~~--~~~~~~~~-p~R~~d~gIaE~~~v~~a~G~A~~ 377 (616)
T 3mos_A 304 LPSYKV-GDKIATRKAYGQALAKLGHASDRIIALDGDTKNS--TF--SEIFKKEH-PDRFIECYIAEQNMVSIAVGCATR 377 (616)
T ss_dssp CCCCCT-TCBCCHHHHHHHHHHHHHHHCTTEEEEESSCHHH--HS--HHHHHHHC-GGGEEECCSCHHHHHHHHHHHHGG
T ss_pred Cccccc-ccchHHHHHHHHHHHHHHhhCCCEEEEeCCcCCC--cc--hhhHHHhC-CCCeEEcCccHHHHHHHHHHHHHc
Confidence 345554 3678999999999999999999999999999743 22 47899999 999999999999999999999999
Q ss_pred CC-eeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCC-CCC-CCCCCCc-chHHHHHHhcCCCcEEEeeC
Q 020510 107 GL-KPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAA-AGVGAQH-SHCYAAWYASVPGLKVLSPY 182 (325)
Q Consensus 107 G~-~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~-~g~G~tH-s~~~~a~~~~iP~~~V~~P~ 182 (325)
|+ +|++.+| +.|++|++|||+++ ++ +++|++++..+ |.+ +.+|+|| ++.++++|+++|||+|++|+
T Consensus 378 G~~~~~~~~f-~~Fl~~a~dqi~~~-a~--------~~~~v~~v~~~~g~~~G~dG~tH~~~ed~a~l~~iP~l~V~~P~ 447 (616)
T 3mos_A 378 NRTVPFCSTF-AAFFTRAFDQIRMA-AI--------SESNINLCGSHCGVSIGEDGPSQMALEDLAMFRSVPTSTVFYPS 447 (616)
T ss_dssp GCCEEEEEEE-GGGGGGGHHHHHHH-HH--------TTCCEEEEEESBSGGGCTTCGGGCBSSHHHHHHTSTTEEEECCC
T ss_pred CCCCEEEEeh-HHHHHHHHHHHHHH-HH--------hCCCeEEEEECCCccccCCCCcccCHHHHHHhcCCCCCEEEecC
Confidence 97 7888887 67789999999986 54 46788877654 664 4589998 35677999999999999999
Q ss_pred CHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCc--EEEEEechhHHHHHHHHHHH
Q 020510 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKD--VTITAFSKIVGLSLKAAEIL 260 (325)
Q Consensus 183 d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~d--v~Iia~G~~~~~a~~Aa~~L 260 (325)
|++|++.+++++++.++|+++|.+|. .. +.++...+.+++|+++++++|+| ++||++|++++.|++|++.|
T Consensus 448 d~~e~~~~l~~a~~~~gp~~ir~~r~----~~---p~~~~~~~~~~~Gka~vl~eg~d~dv~iva~G~~v~~al~Aa~~L 520 (616)
T 3mos_A 448 DGVATEKAVELAANTKGICFIRTSRP----EN---AIIYNNNEDFQVGQAKVVLKSKDDQVTVIGAGVTLHEALAAAELL 520 (616)
T ss_dssp SHHHHHHHHHHHHTCCSEEEEECCSS----CC---BCCSCTTCCCCTTCCEEEECCSSEEEEEECCTHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEEeCC----CC---CccCCCcccccCCeEEEEEeCCCCCEEEEEeCHHHHHHHHHHHHH
Confidence 99999999999999999999997654 22 22333445678999999999976 99999999999999999999
Q ss_pred HhcCCcEEEEEeeeccCCCHHHHHHHHhCC-CeEEEEecCCCCCCHHHHHHHHHcCCC
Q 020510 261 AKEGISAEVINLRSIRPLDRSTINASVRKT-NRLVTVEEGFPQHGVGAEIWCAFFPPA 317 (325)
Q Consensus 261 ~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~-~~vvvvEe~~~~GGlg~~v~~~l~~~~ 317 (325)
+++||+++|||++|++|||+++|.++++++ ++|||+|||+..||+|++|++.|.+++
T Consensus 521 ~~~Gi~v~Vidlr~l~PlD~e~i~~~~~~~~~~vvvvEe~~~~GG~G~~v~~~l~~~~ 578 (616)
T 3mos_A 521 KKEKINIRVLDPFTIKPLDRKLILDSARATKGRILTVEDHYYEGGIGEAVSSAVVGEP 578 (616)
T ss_dssp HTTTCEEEEEECSEEESCCHHHHHHHHHHTTTEEEEEEEEESTTSHHHHHHHHHTTCT
T ss_pred HhcCCCEEEEEeCccCCCCHHHHHHHHHhcCCEEEEEcCCCCCcCHHHHHHHHHHhcC
Confidence 999999999999999999999999999999 899999999999999999999999875
No 8
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=100.00 E-value=2e-50 Score=412.70 Aligned_cols=258 Identities=26% Similarity=0.325 Sum_probs=231.8
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEecc
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEFM 115 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~~~ 115 (325)
..+|+++|+++|.+++++|++|+++++|+...+ ++ .+|+++| |+||||+||+|++|+++|+|+|++|+|||+++|
T Consensus 321 ~~~~~~~~~~~l~~~~~~d~~v~~i~~d~~~~~---~~-~~f~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~~ 395 (629)
T 2o1x_A 321 AYSWSAAFGEAVTEWAKTDPRTFVVTPAMREGS---GL-VEFSRVH-PHRYLDVGIAEEVAVTTAAGMALQGMRPVVAIY 395 (629)
T ss_dssp CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TC-HHHHHHC-GGGEEECCSCHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHHHHHHhhhCcCEEEEeccccCCc---Ch-HHHHHhc-CcceEeccccHHHHHHHHHHHHHcCCEEEEEec
Confidence 678999999999999999999999999986432 33 7899999 999999999999999999999999999999996
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCC-CCCCCCCCCcch-HHHHHHhcCCCcEEEeeCCHHHHHHHHHH
Q 020510 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAAAGVGAQHSH-CYAAWYASVPGLKVLSPYSSEDARGLLKA 193 (325)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~~g~G~tHs~-~~~a~~~~iP~~~V~~P~d~~e~~~~l~~ 193 (325)
+.|++|++|||++++|+ +++|++++.+. |..+++|+||++ .+.++||++|||+|++|+|++|++.++++
T Consensus 396 -~~F~~~a~dqi~~~~a~--------~~~pvv~~~~~~g~~g~dG~tH~~~~d~a~~r~iP~l~v~~P~d~~e~~~~~~~ 466 (629)
T 2o1x_A 396 -STFLQRAYDQVLHDVAI--------EHLNVTFCIDRAGIVGADGATHNGVFDLSFLRSIPGVRIGLPKDAAELRGMLKY 466 (629)
T ss_dssp -HHHHGGGHHHHHHTTTT--------TTCCCEEEEESBBCCCTTCTTTCBCSHHHHTTTSTTCEEECCSSHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHhh--------cCCCEEEEEECCccCCCCCcccCccHHHHHHHccCCcEEEecCCHHHHHHHHHH
Confidence 67899999999999996 58999998875 555558999966 44599999999999999999999999999
Q ss_pred hHhCCCcEEEEeCccccCcccCcccccc-CCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 194 AIRDPDPVVFLENELLYGESFPVSAEVL-DSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 194 a~~~~~Pv~ir~~~~l~~~~~p~~~~~~-~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
|++.++|+++|++|..+ + .++ ++.+.+++|+++++++|.|++||++|++++.|++|++.|+ +++|||+
T Consensus 467 a~~~~~Pv~i~~~r~~~----~---~~~~~~~~~~~~G~~~~~~~g~dv~iva~G~~v~~a~~Aa~~L~----~~~Vi~~ 535 (629)
T 2o1x_A 467 AQTHDGPFAIRYPRGNT----A---QVPAGTWPDLKWGEWERLKGGDDVVILAGGKALDYALKAAEDLP----GVGVVNA 535 (629)
T ss_dssp HHHSSSCEEEECCSSBC----C---CCCTTCCCCCCTTCCEEEECCSSEEEEECHHHHHHHHHHHTTCT----TEEEEEC
T ss_pred HHhCCCCEEEEecCCCC----C---CCcccccccccCCceEEEeeCCCEEEEEecHHHHHHHHHHHHhc----CCEEEee
Confidence 99999999999887632 1 111 2345678999999999999999999999999999999996 8999999
Q ss_pred eeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 273 RSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 273 ~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
+|++|||++.|.+++++++++||+|||...||+|++|++++.++++
T Consensus 536 ~~~~Pld~~~i~~~~~~~~~vv~vEe~~~~gG~g~~v~~~l~~~~~ 581 (629)
T 2o1x_A 536 RFVKPLDEEMLREVGGRARALITVEDNTVVGGFGGAVLEALNSMNL 581 (629)
T ss_dssp CEEESCCHHHHHHHHHHCSEEEEEEEEESSSSHHHHHHHHHHHTTC
T ss_pred CCCCCCcHHHHHHHHhhCCcEEEEecCCCCCCHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999988774
No 9
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.2e-50 Score=408.66 Aligned_cols=259 Identities=22% Similarity=0.327 Sum_probs=229.9
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEec
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVEF 114 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~~ 114 (325)
.+.+|+++|+++|.+++++|++|+++++|+...+ ++ .+|+++| |+||||+||+|++|+++|+|+|+.|+|||+++
T Consensus 317 ~~~~~~~~~~~~l~~~~~~d~~v~~~~~d~~~~~---~~-~~~~~~~-~~r~~~~gIaE~~~~~~a~G~A~~G~rp~~~~ 391 (621)
T 2o1s_A 317 GLPSYSKIFGDWLCETAAKDNKLMAITPAMREGS---GM-VEFSRKF-PDRYFDVAIAEQHAVTFAAGLAIGGYKPIVAI 391 (621)
T ss_dssp -CCBHHHHHHHHHHHHHHHCTTEEEEESSCTTTT---TC-HHHHHHC-TTTEEECCSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred chHHHHHHHHHHHHHHHhhCcCEEEEeCcccCCc---Ch-HHHHHhC-CCceEecCcCHHHHHHHHHHHHHCCCEEEEEe
Confidence 4579999999999999999999999999986432 33 7899999 99999999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCC-CCCCCCCCCcch-HHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAAAGVGAQHSH-CYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~~g~G~tHs~-~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
| +.|++|++|||++++|+ +++|++++.+. |..+.+|+||++ .+.++|+++|||+|++|+|++|++.+++
T Consensus 392 ~-~~F~~~a~dqi~~~~a~--------~~~pvv~~~~~~g~~g~~G~tH~~~~d~~~~~~iP~l~v~~P~d~~e~~~~l~ 462 (621)
T 2o1s_A 392 Y-STFLQRAYDQVLHDVAI--------QKLPVLFAIDRAGIVGADGQTHQGAFDLSYLRCIPEMVIMTPSDENECRQMLY 462 (621)
T ss_dssp E-TTGGGGGHHHHHHTTTT--------TTCCCEEEEESCBCCCTTCGGGCBCSHHHHTTTSTTCEEECCSSHHHHHHHHH
T ss_pred h-HhHHHHHHHHHHHHHHh--------cCCCEEEEEECCccCCCCCCccCchHHHHHHhcCCCCEEEecCCHHHHHHHHH
Confidence 6 66889999999999996 58999999875 555559999976 4559999999999999999999999999
Q ss_pred HhHhC-CCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEE
Q 020510 193 AAIRD-PDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVIN 271 (325)
Q Consensus 193 ~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~ 271 (325)
+|++. ++|+|||++|..+. . .+.++. +.+++|+++++++|+|++||++|++++.|++| ++||+++|||
T Consensus 463 ~a~~~~~~Pv~i~~~r~~~~----~-~~~~~~-~~~~~G~~~~~~~g~dv~iva~G~~~~~a~~A-----~~Gi~v~Vi~ 531 (621)
T 2o1s_A 463 TGYHYNDGPSAVRYPRGNAV----G-VELTPL-EKLPIGKGIVKRRGEKLAILNFGTLMPEAAKV-----AESLNATLVD 531 (621)
T ss_dssp HHHHCCSSCEEEECCSSBCC----C-CCCCCC-CCCCTTCCEEEECCSSEEEEEESTTHHHHHHH-----HHHHTCEEEE
T ss_pred HHHHcCCCCEEEEeCCCCCC----C-CCCCcc-ccccCCceEEeecCCCEEEEEecHHHHHHHHH-----cCCCCEEEEe
Confidence 99998 89999998876432 1 111222 56789999999999999999999999999999 4699999999
Q ss_pred eeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 272 LRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 272 ~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
++|++|||++.|.+++++++++||+|||...||+|++|++++.++++
T Consensus 532 ~~~~~P~d~~~i~~~~~~~~~vv~vEe~~~~gg~g~~v~~~l~~~~~ 578 (621)
T 2o1s_A 532 MRFVKPLDEALILEMAASHEALVTVEENAIMGGAGSGVNEVLMAHRK 578 (621)
T ss_dssp CCEEESCCHHHHHHHHHHCSEEEEEEEEESTTSHHHHHHHHHHHTTC
T ss_pred cCccCCCCHHHHHHHHccCCeEEEEECCCCCCCHHHHHHHHHHhcCC
Confidence 99999999999999999999999999999999999999999988774
No 10
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=100.00 E-value=1.8e-46 Score=381.95 Aligned_cols=249 Identities=15% Similarity=0.157 Sum_probs=211.0
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEe
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVE 113 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v~ 113 (325)
.++++|++++++|.++++.+|+++++++|++.++.+. -.+.++|||+||||+||+||+|+++|+|||+. |++||++
T Consensus 336 ~~~a~r~a~~~~l~~l~~~~p~~v~~~aDl~~s~~~~---~~~~~~f~p~R~~d~GIaE~~~v~~a~GlA~~gG~~P~~~ 412 (632)
T 3l84_A 336 KDLATRDSNGEILNVLAKNLEGFLGGSADLGPSNKTE---LHSMGDFVEGKNIHFGIREHAMAAINNAFARYGIFLPFSA 412 (632)
T ss_dssp CCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCC---CTTSCBTTTSSEEECCSCHHHHHHHHHHHHHHSSCEEEEE
T ss_pred cchHHHHHHHHHHHHHHhhCCCEEEEecccCCccCcc---hhcccccCCCCeEEeCccHHHHHHHHHHHHHcCCCEEEEE
Confidence 5789999999999999999999999999997655441 12336788999999999999999999999999 8999999
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCC-CCCCCCcc-hHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAA-AGVGAQHS-HCYAAWYASVPGLKVLSPYSSEDARGL 190 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~-~g~G~tHs-~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (325)
+| +.|+.|++||||+ .|+ +++||+++.. +|.+ +.+|+||+ +.++++||+||||+|++|+|++|++.+
T Consensus 413 ~f-~~F~~~~~~~ir~-~a~--------~~~pv~~~~t~~g~g~G~dG~THq~~ed~a~lr~iP~l~V~~P~d~~e~~~~ 482 (632)
T 3l84_A 413 TF-FIFSEYLKPAARI-AAL--------MKIKHFFIFTHDSIGVGEDGPTHQPIEQLSTFRAMPNFLTFRPADGVENVKA 482 (632)
T ss_dssp EE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCGGGSCSSHHHHHHHSSSCEEECCSSHHHHHHH
T ss_pred ec-HHHHHHHHHHHHH-Hhc--------cCCCEEEEEECCCcCCCCCCCCCCCHhHHHHHhcCCCCEEEecCCHHHHHHH
Confidence 96 6778999999986 676 5899999863 4554 44899993 466799999999999999999999999
Q ss_pred HHHhHhCCCcEEEEeCccccCcccCccccccCC-CccccCCce-EEeee--CCcEEEEEechhHHHHHHHHHHHHhcCCc
Q 020510 191 LKAAIRDPDPVVFLENELLYGESFPVSAEVLDS-SFCLPIGKA-KIERE--GKDVTITAFSKIVGLSLKAAEILAKEGIS 266 (325)
Q Consensus 191 l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~-~~~~~~gk~-~vl~~--G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~ 266 (325)
+++|++.++|+|+|++|... ++.+ .+..+++++ +++++ |+|++||++|++++.|++|++.|+++||+
T Consensus 483 l~~A~~~~~Pv~ir~~r~~~---------~~~~~~~~~~~~~g~~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~~~Gi~ 553 (632)
T 3l84_A 483 WQIALNADIPSAFVLSRQKL---------KALNEPVFGDVKNGAYLLKESKEAKFTLLASGSEVWLCLESANELEKQGFA 553 (632)
T ss_dssp HHHHHHCSSCEEEECCSSCB---------CCCCCCSBCCGGGSSEEEECCTTCSEEEEECGGGHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCCCCEEEEEcCCCC---------CCCccccccccccccEEEEecCCCCEEEEEechHHHHHHHHHHHHHhcCCC
Confidence 99999999999999876521 1222 233455665 88898 89999999999999999999999999999
Q ss_pred EEEEEeeeccCCCHHH--HHHHHhCCCeEEEEecCCCCCCHHH
Q 020510 267 AEVINLRSIRPLDRST--INASVRKTNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 267 ~~Vi~~~~l~P~d~~~--l~~~~~~~~~vvvvEe~~~~GGlg~ 307 (325)
++|||++|++|||.+. +++++.+ ++|||+|||.. .|+++
T Consensus 554 ~~Vi~~~~i~PlD~~~~~~~~sv~~-~~vv~vE~~~~-~g~~~ 594 (632)
T 3l84_A 554 CNVVSMPCFELFEKQDKAYQERLLK-GEVIGVEAAHS-NELYK 594 (632)
T ss_dssp EEEEECSBHHHHHTSCHHHHHHHCC-SEEEEECSSCC-GGGGG
T ss_pred eEEEecCcCCCcchhHHHHHHHhcC-CCEEEEeCChh-hhHHH
Confidence 9999999999999874 6677777 78999999985 45554
No 11
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=100.00 E-value=1.7e-46 Score=385.01 Aligned_cols=258 Identities=18% Similarity=0.216 Sum_probs=212.6
Q ss_pred cccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcc-ccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc
Q 020510 28 RNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY 106 (325)
Q Consensus 28 ~~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~-~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~ 106 (325)
+.|..+ +++++|++++++|.++++++|+++++++|++.+++++ +.+.+|.++|+|+||||+||+||+|+++|+|||+.
T Consensus 371 ~~~~~~-~~~a~R~a~g~~L~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~R~~d~GIaE~~mv~~A~GlA~~ 449 (690)
T 3m49_A 371 PTYELG-SKAATRNSSGAVINAIAESVPSFFGGSADLAGSNKTYMNNEKDFTRDDYSGKNIWYGVREFAMGAAMNGIALH 449 (690)
T ss_dssp CCCCTT-CEEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTSCBCBTTBTTCCEEECCSCHHHHHHHHHHHHHH
T ss_pred cccccc-cchHHHHHHHHHHHHHHhhCCCEEEEeCcccccCCccccccccchhhcCCCceEEcCchHHHHHHHHHHHHHc
Confidence 345554 7889999999999999999999999999998777664 55678888887999999999999999999999999
Q ss_pred -CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCC-CCC-CCCCCCcc-hHHHHHHhcCCCcEEEeeC
Q 020510 107 -GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN-GAA-AGVGAQHS-HCYAAWYASVPGLKVLSPY 182 (325)
Q Consensus 107 -G~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~-G~~-~g~G~tHs-~~~~a~~~~iP~~~V~~P~ 182 (325)
|++||++||.. |+.++..|||+ +|+ +++||+++.++ |.+ +.+|+||+ ..++++||+||||+|++|+
T Consensus 450 gG~~P~~~tf~~-Fs~f~~~air~-~al--------~~lpVv~v~~~~gigvG~dG~THq~ied~a~lr~iPnl~V~~Pa 519 (690)
T 3m49_A 450 GGLKTYGGTFFV-FSDYLRPAIRL-AAL--------MQLPVTYVFTHDSIAVGEDGPTHEPIEQLAALRAMPNVSVIRPA 519 (690)
T ss_dssp SSCEEEEEEEGG-GGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCGGGCCSSHHHHHHTSTTCEEECCS
T ss_pred CCCEEEEEecHH-HHHHHHHHHHH-HHh--------cCCCcEEEEECCCcCCCCCCCccCCHHHHHHHhcCCCCEEEeeC
Confidence 89999998633 33333345775 676 58999999764 553 45999993 3667999999999999999
Q ss_pred CHHHHHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCC----CccccCCceEEeeeCC----cEEEEEechhHHHH
Q 020510 183 SSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDS----SFCLPIGKAKIEREGK----DVTITAFSKIVGLS 253 (325)
Q Consensus 183 d~~e~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~----~~~~~~gk~~vl~~G~----dv~Iia~G~~~~~a 253 (325)
|++|++.++++|++. ++|++||++|. ..| .++.+ .+.++.|+ +++++|+ |++||++|++++.|
T Consensus 520 d~~E~~~~l~~Ai~~~~~Pv~ir~~R~----~~p---~~~~~~~~~~~~~~~G~-~vlr~g~~g~~dvtiia~G~~v~~A 591 (690)
T 3m49_A 520 DGNESVAAWRLALESTNKPTALVLTRQ----DLP---TLEGAKDDTYEKVAKGA-YVVSASKKETADVILLATGSEVSLA 591 (690)
T ss_dssp SHHHHHHHHHHHHHCSSSCEEEECCSS----EEE---CCHHHHTTHHHHHHTSC-EEEECCSSSSCSEEEEECTTHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCEEEEeecc----cCC---CCCccccccccccCCCe-EEEEecCCCCCCEEEEEechHHHHH
Confidence 999999999999998 78999998765 222 11111 14567786 6889885 99999999999999
Q ss_pred HHHHHHHHhcCCcEEEEEeeeccCCCH--HHHHHHHh--CCCeEEEEecCCCCCC
Q 020510 254 LKAAEILAKEGISAEVINLRSIRPLDR--STINASVR--KTNRLVTVEEGFPQHG 304 (325)
Q Consensus 254 ~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~--~~l~~~~~--~~~~vvvvEe~~~~GG 304 (325)
++|++.|+++||+++|||++|++|||. +.+++++. +++++||+|||...|+
T Consensus 592 l~Aa~~L~~~GI~~~Vid~~~i~p~D~~d~~~~~~v~~~~~~~~v~vEe~~~~G~ 646 (690)
T 3m49_A 592 VEAQKALAVDGVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEMGATFGW 646 (690)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCCTTT
T ss_pred HHHHHHHHhcCCCeEEEecccCCcCccccHHHHHHHhhccCCeEEEEECCchhhH
Confidence 999999999999999999999999986 44555554 5678999999998763
No 12
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.8e-46 Score=381.65 Aligned_cols=268 Identities=16% Similarity=0.155 Sum_probs=220.8
Q ss_pred ccccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcc-ccchhHHHHh-----CC----CceeechhhHHHH
Q 020510 27 LRNYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKY-----GP----ERVLDTPITEAGF 96 (325)
Q Consensus 27 ~~~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~-~~~~~~~~~~-----gp----~R~i~~GIaE~~~ 96 (325)
++.|..+.+++++|++|+++|.+++++||++|++++|++.+++++ +.+.+|.++| || +||||+||+||+|
T Consensus 365 ~p~~~~~~~~~atr~a~~~~L~~l~~~~p~vv~~saDl~~s~~t~~~~~~~f~~~~~~~~~~p~~~~~R~id~GIaE~~m 444 (700)
T 3rim_A 365 LPHWEPGSKALATRAASGAVLSALGPKLPELWGGSADLAGSNNTTIKGADSFGPPSISTKEYTAHWYGRTLHFGVREHAM 444 (700)
T ss_dssp CCCCCTTSSCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTCCEESCGGGCCSSCCEETTCCEEECCSCHHHH
T ss_pred cccccccccchHHHHHHHHHHHHHHhhCCCEEEEeCCccCCCCcccccchhhcccccccccCCcccCCceeecCccHHHH
Confidence 345665557899999999999999999999999999998776653 2346788888 46 6999999999999
Q ss_pred HHHHHHHhcc-CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCC-CCCCCCcc-hHHHHHHhc
Q 020510 97 TGIGVGAAYY-GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAA-AGVGAQHS-HCYAAWYAS 172 (325)
Q Consensus 97 vg~A~GlA~~-G~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~-~g~G~tHs-~~~~a~~~~ 172 (325)
+++|+|||+. |++||+++| ..|+.++.+|||+ +|+ +++||+++.+ +|.+ +.+|+||+ ..++++||+
T Consensus 445 v~~A~GlA~~gG~~Pv~~tF-~~F~d~~~~~ir~-~al--------~~lpvv~v~thdg~gvG~dG~THq~ied~a~lr~ 514 (700)
T 3rim_A 445 GAILSGIVLHGPTRAYGGTF-LQFSDYMRPAVRL-AAL--------MDIDTIYVWTHDSIGLGEDGPTHQPIEHLSALRA 514 (700)
T ss_dssp HHHHHHHHHHSSCEEEEEEE-GGGGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTSCSSHHHHHHT
T ss_pred HHHHHHHHHcCCCEEEEEec-HHHHHHHHHHHHH-hcC--------CCCCEEEEEeCCCcccCCCCCccCChhHHHHHhc
Confidence 9999999999 999999987 4567788889986 776 5899999875 4554 45899992 356799999
Q ss_pred CCCcEEEeeCCHHHHHHHHHHhHhCC---CcEEEEeCccccCcccCccccccCC-CccccCCceEEeeeCC--------c
Q 020510 173 VPGLKVLSPYSSEDARGLLKAAIRDP---DPVVFLENELLYGESFPVSAEVLDS-SFCLPIGKAKIEREGK--------D 240 (325)
Q Consensus 173 iP~~~V~~P~d~~e~~~~l~~a~~~~---~Pv~ir~~~~l~~~~~p~~~~~~~~-~~~~~~gk~~vl~~G~--------d 240 (325)
||||+|++|+|+.|++.++++|++.+ +|+|||++|.. .| .++.+ .+.+++|+ +++++|+ |
T Consensus 515 iPnl~V~~Pad~~e~~~~l~~Ai~~~~~~~Pv~ir~~r~~----~~---~~~~~~~~~~~~G~-~vlr~g~~~~~~~~~d 586 (700)
T 3rim_A 515 IPRLSVVRPADANETAYAWRTILARRNGSGPVGLILTRQG----VP---VLDGTDAEGVARGG-YVLSDAGGLQPGEEPD 586 (700)
T ss_dssp STTCEEECCSSHHHHHHHHHHHHTTTTCSSCEEEECCSSE----EC---CCTTCCHHHHHHSC-EEEECCSCCCTTCCCS
T ss_pred CCCCEEEeCCCHHHHHHHHHHHHHccCCCCCEEEEecccc----CC---CcCcccccccCCCc-EEEecCCccccCCCCC
Confidence 99999999999999999999999985 59999987652 22 22233 35677887 7899987 9
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHH--HHHHHHhC--CCeEEEEecCCCCCCHHHHHHHHHcCC
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS--TINASVRK--TNRLVTVEEGFPQHGVGAEIWCAFFPP 316 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~--~l~~~~~~--~~~vvvvEe~~~~GGlg~~v~~~l~~~ 316 (325)
++||++|++++.|++|++.|+++||+++|||++|++|||.+ .+++.+.+ ++++||+||+...|| .+++.++
T Consensus 587 vtiia~G~~v~~al~Aa~~L~~~Gi~~~VVd~~~i~p~D~~~~~~~~~v~~~~~~~~vtvEe~~~~G~-----~~~~~~~ 661 (700)
T 3rim_A 587 VILIATGSEVQLAVAAQTLLADNDILARVVSMPCLEWFEAQPYEYRDAVLPPTVSARVAVEAGVAQCW-----HQLVGDT 661 (700)
T ss_dssp EEEEECGGGHHHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCTTCCCEEEECSSCSGGG-----HHHHCTT
T ss_pred EEEEEechHHHHHHHHHHHHHhcCCCeEEEEeccccccCcccHHHHHHHhcccceEEEEEeCCCchhH-----HHHHhcC
Confidence 99999999999999999999999999999999999999994 34444543 678999999998765 3555544
Q ss_pred C
Q 020510 317 A 317 (325)
Q Consensus 317 ~ 317 (325)
+
T Consensus 662 ~ 662 (700)
T 3rim_A 662 G 662 (700)
T ss_dssp C
T ss_pred C
Confidence 3
No 13
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=100.00 E-value=6e-46 Score=381.86 Aligned_cols=256 Identities=19% Similarity=0.213 Sum_probs=216.5
Q ss_pred cccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcc-ccchhHHHH---hCC---CceeechhhHHHHHHHHHHHhcc
Q 020510 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEK---YGP---ERVLDTPITEAGFTGIGVGAAYY 106 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~-~~~~~~~~~---~gp---~R~i~~GIaE~~~vg~A~GlA~~ 106 (325)
++++++|++++++|.++++.+|++|++++|++.+++++ +.+.+|+++ | | +||||+||+||+|+++|+|||+.
T Consensus 392 ~~~~atR~A~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~~~-p~~~~R~~d~GIaE~~mv~~AaGlA~~ 470 (711)
T 3uk1_A 392 GETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANADGP-GVQWGNHINYGVREFGMSAAINGLVLH 470 (711)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCEECSSSS-SEECCSEEECCSCHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHHHhhCCCEEEEeccccCcCCcccccchhhhhhhccC-CCCCCcEEEeCccHHHHHHHHHHHHHc
Confidence 46789999999999999999999999999998766653 234578888 9 8 99999999999999999999995
Q ss_pred -CCeeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCC-CCCCCCcc-hHHHHHHhcCCCcEEEeeC
Q 020510 107 -GLKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAA-AGVGAQHS-HCYAAWYASVPGLKVLSPY 182 (325)
Q Consensus 107 -G~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~-~g~G~tHs-~~~~a~~~~iP~~~V~~P~ 182 (325)
|++||+++| +.|++|+++|||+ +|+ +++||+++.. +|.+ +.+|+||+ ..++++||+||||+|++|+
T Consensus 471 ~G~~Pv~~~f-~~F~~~~~~~ir~-~a~--------~~lpv~~v~thdg~gvG~dG~THq~~ed~a~lr~iPnl~V~~Pa 540 (711)
T 3uk1_A 471 GGYKPFGGTF-LTFSDYSRNALRV-AAL--------MKVPSIFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPA 540 (711)
T ss_dssp SSCEEEEEEE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCS
T ss_pred CCCEEEEEEh-HHHHHHHHHHHHH-hhh--------cCCCEEEEEECCCcCcCCCCCccCChhHHHHHhcCCCCEEEecC
Confidence 999999996 7788999999987 676 5899999874 4554 45999993 3667999999999999999
Q ss_pred CHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCC---ccccCCceEEeee--C----CcEEEEEechhHHHH
Q 020510 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSS---FCLPIGKAKIERE--G----KDVTITAFSKIVGLS 253 (325)
Q Consensus 183 d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~---~~~~~gk~~vl~~--G----~dv~Iia~G~~~~~a 253 (325)
|++|++.++++|++.++|+|||++|. ..| .++.++ +.++.|++ ++++ | +|++||++|+++++|
T Consensus 541 d~~E~~~~l~~Ai~~~~Pv~ir~~r~----~~p---~~~~~~~~~~~i~~G~~-vl~~~~G~~~~~dvtiia~G~~v~~a 612 (711)
T 3uk1_A 541 DTVETAVAWTYAVAHQHPSCLIFSRQ----NLA---FNARTDAQLANVEKGGY-VLRDWDEEIVARKIILIATGSEVELA 612 (711)
T ss_dssp SHHHHHHHHHHHHHSSSCEEEECCSS----EEC---CCCCCHHHHHHGGGSSE-EEECCCSSCCSEEEEEEECTTHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeeCC----CCC---CCCCccccccccCCCeE-EEEecCCCCCCCCEEEEEecHHHHHH
Confidence 99999999999999999999998765 222 222222 45677774 6664 7 799999999999999
Q ss_pred HHHHHHHHhcCCcEEEEEeeeccCCCHHH--HHHHHhCCCe-EEEEecCCCCCCHHHHH
Q 020510 254 LKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKTNR-LVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 254 ~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~--l~~~~~~~~~-vvvvEe~~~~GGlg~~v 309 (325)
++|++.|+++||+++|||++|++|||.+. +++++.++++ +|++|++.. +|+++.+
T Consensus 613 l~Aa~~L~~~GI~~~Vid~~si~plD~~~~~~~~sv~~~~~~~V~vE~~~~-~g~~~~~ 670 (711)
T 3uk1_A 613 MKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVT-DFWRKYV 670 (711)
T ss_dssp HHHHHHHHHTTEEEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCS-GGGHHHH
T ss_pred HHHHHHHHHcCCCeEEEecCcCCccchhHHHHHHHhhccCCeEEEEeCCcc-ccHHHHh
Confidence 99999999999999999999999999886 5677877764 899999874 5676654
No 14
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=100.00 E-value=7.1e-46 Score=381.59 Aligned_cols=259 Identities=19% Similarity=0.254 Sum_probs=217.5
Q ss_pred ccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcc--ccchhHHH------HhCCCceeechhhHHHHHHHH
Q 020510 29 NYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY--KISKGLLE------KYGPERVLDTPITEAGFTGIG 100 (325)
Q Consensus 29 ~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~--~~~~~~~~------~~gp~R~i~~GIaE~~~vg~A 100 (325)
.|...++++++|++++++|.++++.+|+++++++|++.+++++ ++ ..|++ +| |+||||+||+||+|+++|
T Consensus 348 ~~~~~~~~~a~r~a~~~~L~~~~~~~p~v~~~~aDl~~s~~~~~~g~-~~f~~~~~~~~~~-p~R~~d~gIaE~~~vg~a 425 (680)
T 1gpu_A 348 TYTAKDSAVATRKLSETVLEDVYNQLPELIGGSADLTPSNLTRWKEA-LDFQPPSSGSGNY-SGRYIRYGIREHAMGAIM 425 (680)
T ss_dssp CCCTTSCCBCHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCSCTTC-CEECCTTTSSEET-TCCEEECCSCHHHHHHHH
T ss_pred hhccCCcchHHHHHHHHHHHHHHhhCCCEEEEecccccccccccccc-cccccccccccCC-CCceecCCccHHHHHHHH
Confidence 3422347889999999999999999999999999998776654 22 35777 99 999999999999999999
Q ss_pred HHHhccC-Ce-eEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCCC-CCCCCcch--HHHHHHhcCC
Q 020510 101 VGAAYYG-LK-PVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAA-GVGAQHSH--CYAAWYASVP 174 (325)
Q Consensus 101 ~GlA~~G-~~-p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~-g~G~tHs~--~~~a~~~~iP 174 (325)
+|||+.| ++ ||+++| +.|+.++++|||+ +|+ +++||+++.+ +|.+. .+|+|| | .++++||++|
T Consensus 426 ~GlA~~Gg~~~P~~~~f-~~F~~~~~~air~-~a~--------~~lpvv~v~t~~g~g~G~dG~tH-q~~edla~lr~iP 494 (680)
T 1gpu_A 426 NGISAFGANYKPYGGTF-LNFVSYAAGAVRL-SAL--------SGHPVIWVATHDSIGVGEDGPTH-QPIETLAHFRSLP 494 (680)
T ss_dssp HHHHHHCTTCEEEEEEE-HHHHGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTT-CCSSHHHHHHTSS
T ss_pred HHHHhcCCCceEEEeeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCccccCCCCCcc-CCHHHHHHhcCCC
Confidence 9999998 99 999987 5567799999988 676 5899999874 45554 499999 5 4459999999
Q ss_pred CcEEEeeCCHHHHHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCCCcc-ccCCceEEeeeC--CcEEEEEechhH
Q 020510 175 GLKVLSPYSSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSFC-LPIGKAKIEREG--KDVTITAFSKIV 250 (325)
Q Consensus 175 ~~~V~~P~d~~e~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~-~~~gk~~vl~~G--~dv~Iia~G~~~ 250 (325)
||+|++|+|++|++.++++|++. ++|+|||++|. .. +.++.+++. +++| ++++++| .|++||++|+++
T Consensus 495 ~l~V~~Pad~~e~~~~l~~A~~~~~~Pv~i~~~r~----~~---~~~~~~~~~~~~~G-~~vl~~g~~~dvtiva~G~~v 566 (680)
T 1gpu_A 495 NIQVWRPADGNEVSAAYKNSLESKHTPSIIALSRQ----NL---PQLEGSSIESASKG-GYVLQDVANPDIILVATGSEV 566 (680)
T ss_dssp SCEEECCCSHHHHHHHHHHHHHCSSCCEEEECCSS----CB---CCCTTCCHHHHTTS-CEEEECCSSCSEEEEECTHHH
T ss_pred CCEEEecCCHHHHHHHHHHHHHhCCCcEEEEecCC----CC---CCCCCcchhhccCC-CEEEecCCCCCEEEEEEcHHH
Confidence 99999999999999999999997 89999998765 22 223333344 6677 5888888 899999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHH--HHHHHhCCC-eEEEEecCCCCCCHHHHH
Q 020510 251 GLSLKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKTN-RLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 251 ~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~--l~~~~~~~~-~vvvvEe~~~~GGlg~~v 309 (325)
+.|++|++.|+++||+++|||++|++|||.+. +.+++.+++ ++||+||+.. +|+++.|
T Consensus 567 ~~al~Aa~~L~~~Gi~~~Vvd~~~l~pld~~~~~~~~sv~~~~~~~v~vE~~~~-~g~~~~v 627 (680)
T 1gpu_A 567 SLSVEAAKTLAAKNIKARVVSLPDFFTFDKQPLEYRLSVLPDNVPIMSVEVLAT-TCWGKYA 627 (680)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSCHHHHHHSCHHHHHHHSCSSSCEEEECSSCS-TTGGGTC
T ss_pred HHHHHHHHHHHhcCCCEEEEEcCCCCcchhhhHHHHHHHhccCCceEEEeCCcc-ccHHHhc
Confidence 99999999999999999999999999999985 555666664 5699999987 7887754
No 15
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=100.00 E-value=1.7e-45 Score=378.23 Aligned_cols=256 Identities=18% Similarity=0.195 Sum_probs=216.7
Q ss_pred ccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcc-ccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCee
Q 020510 33 AVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAY-KISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP 110 (325)
Q Consensus 33 ~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~-~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p 110 (325)
+++++++|++++++|.++++.+|+++++++|++.+++++ +.+..|+++| |+||||+||+||+|+++|+|||+. |++|
T Consensus 351 ~~~~~~~r~a~~~~L~~l~~~~p~v~~~~aDl~~s~~~~~~~~~~f~~~~-p~R~id~GIaE~~~v~~a~GlA~~gG~~P 429 (669)
T 2r8o_A 351 NPAKIASRKASQNAIEAFGPLLPEFLGGSADLAPSNLTLWSGSKAINEDA-AGNYIHYGVREFGMTAIANGISLHGGFLP 429 (669)
T ss_dssp SCCCEEHHHHHHHHHHHHTTTCTTEEEEESSCHHHHTCCCTTCCBTTTCT-TCSEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CCccHHHHHHHHHHHHHHHhhCCCeEEecCcccccccccccccccccccC-CCCeeecchhHHHHHHHHHHHHHcCCCeE
Confidence 347889999999999999999999999999998777765 3346789999 999999999999999999999999 8999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCCC-CCCCCcch--HHHHHHhcCCCcEEEeeCCHHH
Q 020510 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAA-GVGAQHSH--CYAAWYASVPGLKVLSPYSSED 186 (325)
Q Consensus 111 ~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~-g~G~tHs~--~~~a~~~~iP~~~V~~P~d~~e 186 (325)
|+.+| +.|+.++++||++ +|+ +++|++++.+ +|.+. .+|+|| | .+.++||++|||+|++|+|++|
T Consensus 430 ~~~tf-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~~~G~dG~tH-q~~edla~lr~iP~l~V~~Pad~~E 498 (669)
T 2r8o_A 430 YTSTF-LMFVEYARNAVRM-AAL--------MKQRQVMVYTHDSIGLGEDGPTH-QPVEQVASLRVTPNMSTWRPCDQVE 498 (669)
T ss_dssp EEEEE-GGGGGTTHHHHHH-HHH--------TTCCCEEEEECCSGGGCTTCTTT-CCSSHHHHHHTSTTCEEECCSSHHH
T ss_pred EEeeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCCcCcCCCCCcc-CCHHHHHHhcCCCCCEEEecCCHHH
Confidence 99987 5567799999998 676 5899999875 45554 499999 5 4459999999999999999999
Q ss_pred HHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCCCc---cccCCceEEeee--C-CcEEEEEechhHHHHHHHHHH
Q 020510 187 ARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF---CLPIGKAKIERE--G-KDVTITAFSKIVGLSLKAAEI 259 (325)
Q Consensus 187 ~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~---~~~~gk~~vl~~--G-~dv~Iia~G~~~~~a~~Aa~~ 259 (325)
++.++++|++. ++|+|||++|..+. .++.+++ .+++| .+++++ | .|++||++|+++++|++|++.
T Consensus 499 ~~~~l~~a~~~~~~Pv~i~~~r~~~~-------~~~~~~~~~~~~~~G-~~vl~~~~g~~dv~iva~G~~v~~al~Aa~~ 570 (669)
T 2r8o_A 499 SAVAWKYGVERQDGPTALILSRQNLA-------QQERTEEQLANIARG-GYVLKDCAGQPELIFIATGSEVELAVAAYEK 570 (669)
T ss_dssp HHHHHHHHHHCSSSCEEEECCSSEEC-------CCCCCHHHHHHGGGS-CEEEECCSSSCSEEEEECGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEeCCCCCC-------CCCCccchhhhccCC-CEEEeccCCCCCEEEEEECHHHHHHHHHHHH
Confidence 99999999997 89999998876331 2222222 25677 478888 8 899999999999999999999
Q ss_pred HHhcCCcEEEEEeeeccCCCHHH---HHHHHhCC-CeEEEEecCCCCCCHHHHH
Q 020510 260 LAKEGISAEVINLRSIRPLDRST---INASVRKT-NRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 260 L~~~Gi~~~Vi~~~~l~P~d~~~---l~~~~~~~-~~vvvvEe~~~~GGlg~~v 309 (325)
|+++||+++|||++|++|||.+. +.+.++++ +++||+||+.. +|+++.+
T Consensus 571 L~~~Gi~~~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~g~~~~~ 623 (669)
T 2r8o_A 571 LTAEGVKARVVSMPSTDAFDKQDAAYRESVLPKAVTARVAVEAGIA-DYWYKYV 623 (669)
T ss_dssp HHHHTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEEEEEEG-GGGHHHH
T ss_pred HHhcCCCeEEEEeccCCccccchHHHHHHhccccCceEEEEeCCch-hhHHHHh
Confidence 99999999999999999999885 55555443 67999999987 7887643
No 16
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=9.4e-45 Score=372.96 Aligned_cols=260 Identities=17% Similarity=0.239 Sum_probs=217.2
Q ss_pred ccCcccccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccc-cchhHHH-HhCCCceeechhhHHHHHHHHHHHhcc
Q 020510 29 NYSSAVKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYK-ISKGLLE-KYGPERVLDTPITEAGFTGIGVGAAYY 106 (325)
Q Consensus 29 ~~~~~~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~-~~~~~~~-~~gp~R~i~~GIaE~~~vg~A~GlA~~ 106 (325)
.|...++++++|++++++|.++++.+|+++++++|++.++++.. -+..|++ +| |+||||+||+||+|+++|+|||+.
T Consensus 358 ~~~~~~~~~a~r~a~~~~L~~i~~~~p~v~~~~aDl~~s~~~~~~g~~~f~~~~~-~~R~id~gIaE~~~v~~a~GlA~~ 436 (675)
T 1itz_A 358 KYTPESPGDATRNLSQQCLNALANVVPGLIGGSADLASSNMTLLKMFGDFQKDTA-EERNVRFGVREHGMGAICNGIALH 436 (675)
T ss_dssp CCCTTSCCBCHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCCCTTCCBCCTTCT-TCCBCCCCSCHHHHHHHHHHHHTT
T ss_pred hhccCCcchHHHHHHHHHHHHHHHhCCCEEEEeccccccccccccccccccccCC-CCCeEeecccHHHHHHHHHHHHhc
Confidence 34233478899999999999999999999999999986655421 1124786 99 999999999999999999999999
Q ss_pred C--CeeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCCC-CCCCCcchHH--HHHHhcCCCcEEEe
Q 020510 107 G--LKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAA-GVGAQHSHCY--AAWYASVPGLKVLS 180 (325)
Q Consensus 107 G--~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~-g~G~tHs~~~--~a~~~~iP~~~V~~ 180 (325)
| ++||+++| +.|+.++++||++ +|+ +++|++++.. +|.+. .+|+|| |+. .++||++|||+|++
T Consensus 437 G~~~~P~~~t~-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~g~G~dG~tH-q~~edla~lr~iP~l~V~~ 505 (675)
T 1itz_A 437 SPGFVPYCATF-FVFTDYMRGAMRI-SAL--------SEAGVIYVMTHDSIGLGEDGPTH-QPIEHLVSFRAMPNILMLR 505 (675)
T ss_dssp CTTCEEEEEEE-GGGHHHHHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTT-CCSSHHHHHHSSSSCEEEC
T ss_pred CCCCEEEEEEH-HHHHHHHHHHHHH-HHh--------cCCCEEEEEECCccccCCCCCCc-CcHHHHHHhccCCCeEEEE
Confidence 9 99999997 5567799999987 676 5899999874 45554 499999 644 59999999999999
Q ss_pred eCCHHHHHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCCCc-cccCCceEEeee---C--CcEEEEEechhHHHH
Q 020510 181 PYSSEDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIERE---G--KDVTITAFSKIVGLS 253 (325)
Q Consensus 181 P~d~~e~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~-~~~~gk~~vl~~---G--~dv~Iia~G~~~~~a 253 (325)
|+|++|++.++++|++. ++|+|||++|. ..| .++.+.+ .+++| ++++++ | .|++||++|+++++|
T Consensus 506 Pad~~e~~~~l~~a~~~~~~Pv~i~~~r~----~~p---~~~~~~~~~~~~G-a~vl~~~~~G~~~dv~iva~G~~v~~a 577 (675)
T 1itz_A 506 PADGNETAGAYKVAVLNRKRPSILALSRQ----KLP---HLPGTSIEGVEKG-GYTISDNSTGNKPDLIVMGTGSELEIA 577 (675)
T ss_dssp CCSHHHHHHHHHHHHHCTTSCEEEEECSS----CBC---CCTTCCHHHHTTS-SEEEEECCSTTCCSEEEEECGGGHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCcEEEEecCC----CCC---CCCCccccccccC-CEEEecccCCCCCCEEEEEECHHHHHH
Confidence 99999999999999997 89999998865 222 2233334 46788 678888 7 899999999999999
Q ss_pred HHHHHHHHhcCCcEEEEEeeeccCCCHHH--HHHHHhCC--CeEEEEecCCCCCCHHHHH
Q 020510 254 LKAAEILAKEGISAEVINLRSIRPLDRST--INASVRKT--NRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 254 ~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~--l~~~~~~~--~~vvvvEe~~~~GGlg~~v 309 (325)
++|++.|+++||+++|||++|++|||.+. +.+.+.++ +++||+||+.. +|+++.+
T Consensus 578 l~Aa~~L~~~Gi~v~Vv~~~~~~pld~~~~~~~~~v~~~~~~~vv~vE~~~~-~G~~~~~ 636 (675)
T 1itz_A 578 AKAADELRKEGKTVRVVSFVSWELFDEQSDEYKESVLPAAVTARISIEAGST-LGWQKYV 636 (675)
T ss_dssp HHHHHHHHHTTCCEEEEECSCHHHHHTSCHHHHHHHSCTTCCCEEEECSSCC-TTTHHHH
T ss_pred HHHHHHHHhcCCcEEEEEeccCcccccchHHHHHHHhccCCceEEEEECCcc-ccHHHhc
Confidence 99999999999999999999999999885 44455555 67999999997 7888754
No 17
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=100.00 E-value=7.4e-45 Score=372.04 Aligned_cols=254 Identities=20% Similarity=0.219 Sum_probs=210.9
Q ss_pred cccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCc-cccchhHH-HHhCCCceeechhhHHHHHHHHHHHhcc-CCee
Q 020510 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGA-YKISKGLL-EKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP 110 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~-~~~~~~~~-~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p 110 (325)
++++++|++++++|.++++.+|+++++++|++.++++ ++.+.+|. ++| |+||||+||+||+|+++|+|||+. |++|
T Consensus 352 ~~~~a~r~a~~~aL~~~~~~~p~vv~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~~d~GIaE~~~v~~a~GlA~~gG~~P 430 (663)
T 3kom_A 352 PVKVATRKASQMVLEVLCKNMPEMFGGSADLTGSNNTNWSGSVWLNNTQE-GANYLSYGVREFGMAAIMNGLSLYGGIKP 430 (663)
T ss_dssp CCCEEHHHHHHHHHHHHHHHCTTEEEEECCC--CCSCCCTTCCBTTTCST-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CcchhHHHHHHHHHHHHHhhCCCEEEEecccCCCCCcccccccccccccC-CCCeEecCccHHHHHHHHHHHHHcCCCEE
Confidence 4678999999999999999999999999999877765 44556784 899 999999999999999999999999 9999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEe-CCCCC-CCCCCCcc-hHHHHHHhcCCCcEEEeeCCHHHH
Q 020510 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PNGAA-AGVGAQHS-HCYAAWYASVPGLKVLSPYSSEDA 187 (325)
Q Consensus 111 ~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~G~~-~g~G~tHs-~~~~a~~~~iP~~~V~~P~d~~e~ 187 (325)
|+++| +.|+.|+++|||+ +|+ +++||+++. .+|.+ +.+|+||+ +.++++||++|||+|+.|+|++|+
T Consensus 431 ~~~tf-~~F~~~~~~~ir~-~a~--------~~lpvv~~~t~~g~g~G~dG~THq~~ed~a~lr~iPnl~V~~Pad~~e~ 500 (663)
T 3kom_A 431 YGGTF-LVFSDYSRNAIRM-SAL--------MKQPVVHVMSHDSIGLGEDGPTHQPIEHVPSLRLIPNLSVWRPADTIET 500 (663)
T ss_dssp EEEEE-GGGHHHHHHHHHH-HHH--------TTCCCEEEEECCSGGGCTTCTTTCCSSHHHHHHTSTTCEEECCCSHHHH
T ss_pred EEEeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEeCCccccCCCCCCcCCHHHHHHHhcCCCcEEEeeCCHHHH
Confidence 99996 6788999999986 676 589999986 34554 45899993 366799999999999999999999
Q ss_pred HHHHHHhHh-CCCcEEEEeCccccCcccCccccccCCC---ccccCCceEEeee--CCcEEEEEechhHHHHHHHHHHHH
Q 020510 188 RGLLKAAIR-DPDPVVFLENELLYGESFPVSAEVLDSS---FCLPIGKAKIERE--GKDVTITAFSKIVGLSLKAAEILA 261 (325)
Q Consensus 188 ~~~l~~a~~-~~~Pv~ir~~~~l~~~~~p~~~~~~~~~---~~~~~gk~~vl~~--G~dv~Iia~G~~~~~a~~Aa~~L~ 261 (325)
+.++++|++ .++|+|||++|. ..| .++.++ +.++.| .+++++ |.|++||++|++++.|++|++.|+
T Consensus 501 ~~~l~~A~~~~~~Pv~ir~~r~----~~p---~~~~~~~~~~~~~~G-~~vl~~~~g~dvtiia~G~~v~~al~Aa~~L~ 572 (663)
T 3kom_A 501 MIAWKEAVKSKDTPSVMVLTRQ----NLM---PVVQTQHQVANIARG-GYLVKDNPDAKLTIVATGSEVELAVKVANEFE 572 (663)
T ss_dssp HHHHHHHHHCSSCCEEEECCSS----EEC---CCCCCHHHHHHHTTT-CEEEECCTTCSCEEEECTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCEEEEccCc----cCC---CcCccccchhcccCc-eEEEEecCCCCEEEEEecHHHHHHHHHHHHHH
Confidence 999999999 689999998764 222 222222 235566 467777 799999999999999999999999
Q ss_pred hcCCcEEEEEeeeccCCCHHH--HHHHHhCC-CeEEEEecCCCCCCHHH
Q 020510 262 KEGISAEVINLRSIRPLDRST--INASVRKT-NRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 262 ~~Gi~~~Vi~~~~l~P~d~~~--l~~~~~~~-~~vvvvEe~~~~GGlg~ 307 (325)
++||+++|||++|++|||.+. +++++.++ ..+|++|++.. .|+.+
T Consensus 573 ~~Gi~~~Vi~~~si~p~D~~~~~~~~~vl~~~~~~v~vE~~~~-~g~~~ 620 (663)
T 3kom_A 573 KKGIKLNVASIPCVEVFATQAHEYKKTVIKDDIPAVFVEMAQP-DMWYK 620 (663)
T ss_dssp HTTCCCEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-GGGGG
T ss_pred hcCCCeEEEEcCcCCcccccHHHHHHHhcCCCCeEEEEecCCc-ccHHH
Confidence 999999999999999999987 55556555 35899998764 44444
No 18
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=100.00 E-value=2.7e-45 Score=375.79 Aligned_cols=255 Identities=20% Similarity=0.170 Sum_probs=214.2
Q ss_pred cccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccc-cchhHHH-HhCCCceeechhhHHHHHHHHHHHhccC-Cee
Q 020510 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYK-ISKGLLE-KYGPERVLDTPITEAGFTGIGVGAAYYG-LKP 110 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~-~~~~~~~-~~gp~R~i~~GIaE~~~vg~A~GlA~~G-~~p 110 (325)
++++++|++++++|.++++.+|+++++++|++.+++++. .+.+|++ +| |+||||+||+|++|+++|+|||+.| ++|
T Consensus 346 ~~~~~~r~a~~~~L~~~~~~~p~~~~~~aDl~~s~~~~~~~~~~f~~~~~-p~R~i~~gIaE~~~~~~a~GlA~~Gg~~P 424 (651)
T 2e6k_A 346 DKPIATRAASGRALNLLAPRLPELLGGSADLTPSNNTKAEGMEDFSRANP-LGRYLHFGVREHAMGAILNGLNLHGGYRA 424 (651)
T ss_dssp CSCBCHHHHHHHHHHHHGGGCTTEEEEESSCHHHHTCSCTTCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSCEE
T ss_pred CccHHHHHHHHHHHHHHHhhCCCEEEEeCccccccccccccccccCccCC-CCceEecCcCHHHHHHHHHHHHHcCCCEE
Confidence 367899999999999999999999999999987666542 3456887 99 9999999999999999999999998 999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEe-CCCCCCC-CCCCcchHH--HHHHhcCCCcEEEeeCCHHH
Q 020510 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PNGAAAG-VGAQHSHCY--AAWYASVPGLKVLSPYSSED 186 (325)
Q Consensus 111 ~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~G~~~g-~G~tHs~~~--~a~~~~iP~~~V~~P~d~~e 186 (325)
|+++|.. |+.++++|||. .|+ +++|++++. .+|.+.| +|+|| |.. .++||++|||+|++|+|++|
T Consensus 425 ~~~t~~~-F~~~~~~air~-~a~--------~~lpvv~~~t~~g~g~G~dG~tH-q~~edla~lr~iP~l~V~~Pad~~E 493 (651)
T 2e6k_A 425 YGGTFLV-FSDYMRPAIRL-AAL--------MGVPTVFVFTHDSIALGEDGPTH-QPVEHLMSLRAMPNLFVIRPADAYE 493 (651)
T ss_dssp EEEEEGG-GGGGSHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTT-CCSSHHHHHHTSTTCEEECCSSHHH
T ss_pred EEEeHHH-HHHHHHHHHHH-HHh--------cCCCEEEEEECCccccCCCcCcc-ccHHHHHHhcCCCCcEEEecCCHHH
Confidence 9999844 56688899877 676 589999985 4555544 99999 644 49999999999999999999
Q ss_pred HHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCCCc-cccCCceEEeeeC--CcEEEEEechhHHHHHHHHHHHHh
Q 020510 187 ARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIEREG--KDVTITAFSKIVGLSLKAAEILAK 262 (325)
Q Consensus 187 ~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~-~~~~gk~~vl~~G--~dv~Iia~G~~~~~a~~Aa~~L~~ 262 (325)
++.++++|++. ++|+|||++|..+ | .++.+++ .++.| ++++++| .|++||++|+++++|++|++.|++
T Consensus 494 ~~~~l~~A~~~~~~Pv~i~~~r~~~----~---~~~~~~~~~~~~G-~~vl~~g~~~dv~iva~G~~v~~al~Aa~~L~~ 565 (651)
T 2e6k_A 494 TFYAWLVALRRKEGPTALVLTRQAV----P---LLSPEKARGLLRG-GYVLEDVEEPQGVLVATGSEVHLALRAQALLRE 565 (651)
T ss_dssp HHHHHHHHHHCCSSCEEEECCSSCB----C---CCCHHHHGGGGGS-SEEEECCSSCSEEEEECTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEEEeCCCC----C---CCCcchhhhhcCC-CEEEeeCCCCCEEEEEECHHHHHHHHHHHHHHh
Confidence 99999999997 8999999887532 1 1222222 35567 5788888 899999999999999999999999
Q ss_pred cCCcEEEEEeeeccCCCHHH---HHHHHhCCCeEEEEecCCCCCCHHHHH
Q 020510 263 EGISAEVINLRSIRPLDRST---INASVRKTNRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 263 ~Gi~~~Vi~~~~l~P~d~~~---l~~~~~~~~~vvvvEe~~~~GGlg~~v 309 (325)
+||+++|||++|++|||.+. +.+.+++++++||+||+.. +|+++.+
T Consensus 566 ~Gi~~~Vv~~~~~~p~d~~~~~~~~~v~~~~~~vv~vE~~~~-~G~~~~v 614 (651)
T 2e6k_A 566 KGVRVRVVSLPSFELFAAQPEAYRKEVLPPGLPVVAVEAGAS-LGWERYA 614 (651)
T ss_dssp TTCCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC
T ss_pred cCCcEEEEecCcCCccccccHHHHHHHhCcCCeEEEEeCCcc-CchHHhC
Confidence 99999999999999999985 5544444468999999987 8888764
No 19
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=100.00 E-value=4.1e-45 Score=375.33 Aligned_cols=254 Identities=18% Similarity=0.172 Sum_probs=218.2
Q ss_pred cccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCcccc---chhHHH-HhCCCceeechhhHHHHHHHHHHHhcc-CC
Q 020510 34 VKQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKI---SKGLLE-KYGPERVLDTPITEAGFTGIGVGAAYY-GL 108 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~---~~~~~~-~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~ 108 (325)
++++++|++++++|.++++++|+++++++|++.+++++.. +..|.+ +| |+||||+||+|++|+++|+|||+. |+
T Consensus 349 ~~~~a~r~a~~~~L~~l~~~~p~vv~~~aDl~~s~~~~~~~~~~~~f~~~~~-~~R~id~GIaE~~~~~~a~GlA~~GG~ 427 (673)
T 1r9j_A 349 SSAIATRKASENCLAVLFPAIPALMGGSADLTPSNLTRPASANLVDFSSSSK-EGRYIRFGVREHAMCAILNGLDAHDGI 427 (673)
T ss_dssp CSCEEHHHHHHHHHHHHHHHCTTEEEEESSCHHHHTCSCGGGCCCBCBTTBT-TCCEEECCSCHHHHHHHHHHHHHHSSC
T ss_pred ccchHHHHHHHHHHHHHHhhCCCEEEEeccccccccccccCcccccccccCC-CCCeEecCccHHHHHHHHHHHHhcCCC
Confidence 4689999999999999999999999999999877666420 234887 99 999999999999999999999999 59
Q ss_pred eeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeC-CCCCC-CCCCCcchH--HHHHHhcCCCcEEEeeCCH
Q 020510 109 KPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGP-NGAAA-GVGAQHSHC--YAAWYASVPGLKVLSPYSS 184 (325)
Q Consensus 109 ~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~-~G~~~-g~G~tHs~~--~~a~~~~iP~~~V~~P~d~ 184 (325)
+||+++| +.|+.|+++||++ +|+ +++|++++.. +|.+. .+|+|| |+ +.++|++||||+|+.|+|+
T Consensus 428 ~P~~~~~-~~F~~~~~~~ir~-~a~--------~~~pvv~~~t~~g~g~G~dG~tH-q~~edla~lr~iP~l~V~~Pad~ 496 (673)
T 1r9j_A 428 IPFGGTF-LNFIGYALGAVRL-AAI--------SHHRVIYVATHDSIGVGEDGPTH-QPVELVAALRAMPNLQVIRPSDQ 496 (673)
T ss_dssp EEEEEEE-GGGGGGGHHHHHH-HHH--------HTCCCEEEEECCSGGGCTTCTTT-CCSSHHHHHHHSTTCEEECCSSH
T ss_pred EEEEEeh-HHHHHHHHHHHHH-HHh--------cCCCEEEEEECCccCcCCCCccc-CCHHHHHHHcCCCCCEEEeCCCH
Confidence 9999997 5567799999988 676 5799999874 45544 499999 54 4599999999999999999
Q ss_pred HHHHHHHHHhHhC-CCcEEEEeCccccCcccCccccccCCCc-cccCCceEEeeeC--CcEEEEEechhHHHHHHHHHHH
Q 020510 185 EDARGLLKAAIRD-PDPVVFLENELLYGESFPVSAEVLDSSF-CLPIGKAKIEREG--KDVTITAFSKIVGLSLKAAEIL 260 (325)
Q Consensus 185 ~e~~~~l~~a~~~-~~Pv~ir~~~~l~~~~~p~~~~~~~~~~-~~~~gk~~vl~~G--~dv~Iia~G~~~~~a~~Aa~~L 260 (325)
+|++.++++|++. ++|+|||++|.. . +.++.+.+ .+++| ++++++| .|++||++|+++++|++|++.|
T Consensus 497 ~e~~~~l~~a~~~~~~Pv~i~~~r~~----~---~~~~~~~~~~~~~G-a~vl~~g~~~dv~lia~G~~v~~al~Aa~~L 568 (673)
T 1r9j_A 497 TETSGAWAVALSSIHTPTVLCLSRQN----T---EPQSGSSIEGVRHG-AYSVVDVPDLQLVIVASGSEVSLAVDAAKAL 568 (673)
T ss_dssp HHHHHHHHHHHHCTTCCEEEECCSSE----E---CCCTTCCHHHHHTS-CEEEECCTTCSEEEEECGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCeEEEEEcCCC----C---CCCCCcccccccCC-CEEEeeCCCCCEEEEEechhHHHHHHHHHHH
Confidence 9999999999997 899999987652 2 22233333 46778 6788988 8999999999999999999999
Q ss_pred HhcCCcEEEEEeeeccCCCHHH---HHHHHhCCCeEEEEecCCCCCCHHHHH
Q 020510 261 AKEGISAEVINLRSIRPLDRST---INASVRKTNRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 261 ~~~Gi~~~Vi~~~~l~P~d~~~---l~~~~~~~~~vvvvEe~~~~GGlg~~v 309 (325)
+++ |+++|||++|++|||.+. +.+++++++++||+||+.. +|+++.|
T Consensus 569 ~~~-i~~~Vv~~~sl~pld~~~~~~i~~~~~~~~~vv~vE~~~~-~g~~~~v 618 (673)
T 1r9j_A 569 SGE-LRVRVVSMPCQELFDAQPDTYRQAVLPAGVPVVSVEAYVS-FGWEKYS 618 (673)
T ss_dssp TTT-CCEEEEECSCHHHHHTSCHHHHHHHSCTTSCEEEECSSCC-TTGGGTC
T ss_pred Hhc-CCEEEEeCCCCchhhcccHHHHHHHhccCCeEEEEeCCCc-cchHHhc
Confidence 999 999999999999999986 8889999989999999987 8887754
No 20
>2jgd_A 2-oxoglutarate dehydrogenase E1 component; flavoprotein, oxidoreductase, thiamine diphosphate, thiamine pyrophosphate, adenosine monophosphate; HET: AMP; 2.6A {Escherichia coli} PDB: 2jgd_B*
Probab=100.00 E-value=6.3e-44 Score=374.88 Aligned_cols=274 Identities=19% Similarity=0.212 Sum_probs=231.6
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCC--------------ccCccccchhHHHHhCCCceeechhhHHHHHHHH
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGE--------------YQGAYKISKGLLEKYGPERVLDTPITEAGFTGIG 100 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~--------------~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A 100 (325)
+.++|..+++.+|.+++++|++|+++++|++. .++.|..+.+|.++|||+||+|+||+|++++|+|
T Consensus 589 ~~~dw~~~e~~al~~l~~~~~~V~~~g~Dv~~gTfs~rh~v~~d~~~g~~~~~l~~l~~~~gp~rv~ds~IaE~~~vg~a 668 (933)
T 2jgd_A 589 KLFDWGGAENLAYATLVDEGIPVRLSGEDSGRGTFFHRHAVIHNQSNGSTYTPLQHIHNGQGAFRVWDSVLSEEAVLAFE 668 (933)
T ss_dssp SCBCHHHHHHHHHHHHHTTTCCEEEEETTTTTCTTSCCCCSEECSSSSCEECGGGCSCTTCCCEEEECCCSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEECCccCCcchhhhhhhcccccCCceeechHHHHHHcCCCeEEECCcCHHHHHHHH
Confidence 35788999999999999999999999999975 2345556688999999999999999999999999
Q ss_pred HHHhccCCe--eEEecccccHHH---HHHHHHHHHH-hhccccCCCCccCCEEEEeCCCCCCCCCCCcch-HHHHHHh--
Q 020510 101 VGAAYYGLK--PVVEFMTFNFSM---QAIDHIINSA-AKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSH-CYAAWYA-- 171 (325)
Q Consensus 101 ~GlA~~G~~--p~v~~~~~~f~~---ra~dqi~~~~-a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~-~~~a~~~-- 171 (325)
+|+|+.|++ |+++.++++|++ |++|||++++ +++ .++.||+++.++|. .+.|++||+ .+|.++.
T Consensus 669 ~G~A~~G~~~lpv~e~qf~dF~~~AQra~DQii~~~~ak~------~~~~~vv~~l~~G~-~g~G~~Hss~~~E~~l~~~ 741 (933)
T 2jgd_A 669 YGYATAEPRTLTIWEAQFGDFANGAQVVIDQFISSGEQKW------GRMCGLVMLLPHGY-EGQGPEHSSARLERYLQLC 741 (933)
T ss_dssp HHHHHHCTTSEEEEEC-CGGGGGGGHHHHHHTTTTHHHHH------CCCCCCEEEEECCC-SSSCTTSSCCCHHHHHHTC
T ss_pred HHHHhcCCCCCCEEEEEEhhhhcccHHHHHHHHHHHHHHH------ccCCCEEEEEeCCC-CCCCcccccchHHHHHHHh
Confidence 999999988 999877788887 9999999988 765 26889999988764 456888854 5888776
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhH-hC-CCcEEEEeCccccCcccCcc--ccccCCCccccCCceEEeeeCCcE--EEEE
Q 020510 172 SVPGLKVLSPYSSEDARGLLKAAI-RD-PDPVVFLENELLYGESFPVS--AEVLDSSFCLPIGKAKIEREGKDV--TITA 245 (325)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~l~~a~-~~-~~Pv~ir~~~~l~~~~~p~~--~~~~~~~~~~~~gk~~vl~~G~dv--~Iia 245 (325)
++|||+|++|+|+.|++.+|++++ +. ++|++||+++.+++.+.... .+++++.|.+++|++++++ |+|+ +|++
T Consensus 742 ~~pnm~V~~Pst~~e~~~lLr~a~~~~~~~Pvii~~pk~l~r~~~~~~~~~~~~~~~f~~~ig~~~~~~-g~dV~~vI~~ 820 (933)
T 2jgd_A 742 AEQNMQVCVPSTPAQVYHMLRRQALRGMRRPLVVMSPKSLLRHPLAVSSLEELANGTFLPAIGEIDELD-PKGVKRVVMC 820 (933)
T ss_dssp CTTCCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTCCBCHHHHHHCCCCSEECCCSCCC-GGGCCEEEEE
T ss_pred CCCCeEEEecCCHHHHHHHHHHHHHhcCCCcEEEEecchhccCCCCcCCccccCCCceeecCCcceEee-cCcceEEEEE
Confidence 559999999999999999999985 64 89999999998876432211 1233355667889998877 8899 7777
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC---eEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN---RLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~---~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
+|.+...+++|++.|+++ +++|||+++|+|||.+.|.+++++++ +|||+||+...||+|+.|++.|.+.++
T Consensus 821 ~G~v~~~l~aa~~~l~~~--~v~VIdl~~l~Pld~e~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~~~~~ 894 (933)
T 2jgd_A 821 SGKVYYDLLEQRRKNNQH--DVAIVRIEQLYPFPHKAMQEVLQQFAHVKDFVWCQEEPLNQGAWYCSQHHFREVIP 894 (933)
T ss_dssp CTTHHHHHHHHHHHTTCC--SEEEEEECEEESCCHHHHHHHHGGGTTCCEEEEEEEEETTSTTHHHHHHHHHTTSC
T ss_pred chHHHHHHHHHHHHcccC--CeEEEEeeccCCCCHHHHHHHHHhCCCCceEEEEecCCCcCCHHHHHHHHHHHhcc
Confidence 777777777777888765 99999999999999999999999998 899999999999999999999988765
No 21
>2yic_A 2-oxoglutarate decarboxylase; lyase; HET: TPP; 1.96A {Mycobacterium smegmatis} PDB: 2xta_A* 2y0p_A* 2xt9_A* 2yid_A*
Probab=100.00 E-value=1.5e-43 Score=369.99 Aligned_cols=265 Identities=18% Similarity=0.216 Sum_probs=221.6
Q ss_pred HHHHHH--HHHHhcCCcEEEEecCCCCc--------------cCccccchhH------HHHhCCCceeechhhHHHHHHH
Q 020510 42 ALNSAL--DEEMSADPKVFLMGEEVGEY--------------QGAYKISKGL------LEKYGPERVLDTPITEAGFTGI 99 (325)
Q Consensus 42 a~~~~L--~~l~~~d~~iv~l~~D~~~~--------------~g~~~~~~~~------~~~~gp~R~i~~GIaE~~~vg~ 99 (325)
+++++| .+++++|++|+++++|+++. +|.|..+.+| .++++|+||+|+||+|++++|+
T Consensus 520 a~~e~la~~~l~~~~~~V~~~G~Dv~~~Tfs~rh~v~~d~~~g~~~~~~~~l~~~~~~~~~~~p~Rv~ds~IsE~~~vG~ 599 (868)
T 2yic_A 520 AFAELLALGSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGF 599 (868)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCcCCccchhhcchhccccCCCceecchhhhcccccchhhcCCcEEEECCccHHHHHHH
Confidence 444443 36689999999999999874 6677778889 7766699999999999999999
Q ss_pred HHHHhccC--CeeEEecccccHHHHH---HHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchH-HHHHH--h
Q 020510 100 GVGAAYYG--LKPVVEFMTFNFSMQA---IDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHC-YAAWY--A 171 (325)
Q Consensus 100 A~GlA~~G--~~p~v~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~-~~a~~--~ 171 (325)
|+|+|+.| .+|+++.++++|++++ +|||+++.. .+| .+++||+++.+.|. .|+|++||++ +|+++ +
T Consensus 600 a~G~A~~G~~~~~i~eaqf~dF~~~AQ~~~DQ~i~~~~-~k~----~~~~~vvi~~p~G~-~G~Gp~Hs~~~~E~~l~l~ 673 (868)
T 2yic_A 600 EYGYSVGNPDAMVLWEAQFGDFVNGAQSIIDEFISSGE-AKW----GQLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLW 673 (868)
T ss_dssp HHHHHHHCTTSEEEEECSSGGGGGGGHHHHHHTTTTHH-HHH----CCCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHC
T ss_pred HHHHHccCCCCceEEEEehHHHHhhHHHHHHHHHHHHH-HHh----CCCCCEEEEecCCC-CCCChhhcCCcHHHHHhcC
Confidence 99999999 5678888889999888 999998763 223 25889999988765 4699999875 88766 9
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhHhCC--CcEEEEeCccccCcccCccc--cccCCCccccCCceEE---eeeCCcE--E
Q 020510 172 SVPGLKVLSPYSSEDARGLLKAAIRDP--DPVVFLENELLYGESFPVSA--EVLDSSFCLPIGKAKI---EREGKDV--T 242 (325)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~l~~a~~~~--~Pv~ir~~~~l~~~~~p~~~--~~~~~~~~~~~gk~~v---l~~G~dv--~ 242 (325)
++|||+|++|+|+.|++.+|+.++..+ +|+||+++|.+|+.+.+..+ +..++.|..++|++++ +++|+|+ +
T Consensus 674 ~~pnm~V~~Ps~p~~~~~lLr~a~~~~~~~Pvii~~pk~llR~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~ 753 (868)
T 2yic_A 674 AEGSMTIAMPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRL 753 (868)
T ss_dssp CTTSCEEECCCSHHHHHHHHHHHHHSSCCCCEEEEECSGGGGCTTSCBCHHHHHSCCCCSEECCHHHHTSSCCGGGCCEE
T ss_pred CCCCCEEEEeCCHHHHHHHHHHHHhcCCCCcEEEEechHHhCCCCCCCCccccCCCCceecCCcceeecccccCCceeEE
Confidence 999999999999999999999988754 99999999998875432211 1112234447899887 7899999 9
Q ss_pred EEEechhHHHHHHHHHHHHhcC-CcEEEEEeeeccCCCHHHHHHHHhCCCe---EEEEecCCCCCCHHHHHHHHHcC
Q 020510 243 ITAFSKIVGLSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVRKTNR---LVTVEEGFPQHGVGAEIWCAFFP 315 (325)
Q Consensus 243 Iia~G~~~~~a~~Aa~~L~~~G-i~~~Vi~~~~l~P~d~~~l~~~~~~~~~---vvvvEe~~~~GGlg~~v~~~l~~ 315 (325)
||++|.+ ..++++++ +++| ++++|||+++|+|||.++|.++++++++ |||+||+..+||+|+.|++.|.+
T Consensus 754 Ii~~G~~-~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~g~~v~~~l~e 827 (868)
T 2yic_A 754 LLTSGKI-YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPE 827 (868)
T ss_dssp EEECSTH-HHHHHHHH--HHHTCTTEEEEEECEEESCCHHHHHHHHHTCTTCCEEEEEEEEETTSTTHHHHHHHHHH
T ss_pred EEEecHH-HHHHHHHH--HhCCCCCEEEEEeeecCCCCHHHHHHHHHhcCCCceEEEEEeCCCCCCcHHHHHHHHHH
Confidence 9999999 66776666 5678 9999999999999999999999999987 89999999999999999999976
No 22
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=4.6e-42 Score=366.72 Aligned_cols=259 Identities=18% Similarity=0.211 Sum_probs=219.8
Q ss_pred HHHHhcCCcEEEEecCCCCc--------------cCccccchhH------HHHhCCCceeechhhHHHHHHHHHHHhccC
Q 020510 48 DEEMSADPKVFLMGEEVGEY--------------QGAYKISKGL------LEKYGPERVLDTPITEAGFTGIGVGAAYYG 107 (325)
Q Consensus 48 ~~l~~~d~~iv~l~~D~~~~--------------~g~~~~~~~~------~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G 107 (325)
.+++++|++|+++++|+++. +|.|..+.+| .++++|+||+|+||+|++++|+|+|+|+.|
T Consensus 773 ~~ll~~~~~V~l~GeDv~rgtfs~rh~v~~d~~~g~~~~~l~~l~~~~~~~~~~~p~rv~ds~IsE~~~vg~a~G~A~~G 852 (1113)
T 2xt6_A 773 GSLIAEGKLVRLSGQDTQRGTFTQRHAVIVDRKTGEEFTPLQLLATNPDGTPTGGKFLVYNSALSEFAAVGFEYGYSVGN 852 (1113)
T ss_dssp HHHHHTTCEEEEEETTTTTCTTSCCCSSEECTTTCCEECGGGGGGBCTTSCBCSCEEEEEECCSCSHHHHHHHHHHHHHC
T ss_pred HHHHhcCCCEEEEcccCCCccchhcchheecccCCceecchhccccccccchhcCCcEEEECCCCHHHHHHHHHHHHhcC
Confidence 34599999999999999863 4567777889 776779999999999999999999999999
Q ss_pred --CeeEEecccccHHHHH---HHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCCCcchH-HHHHH--hcCCCcEEE
Q 020510 108 --LKPVVEFMTFNFSMQA---IDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGAQHSHC-YAAWY--ASVPGLKVL 179 (325)
Q Consensus 108 --~~p~v~~~~~~f~~ra---~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~tHs~~-~~a~~--~~iP~~~V~ 179 (325)
.+|+++.++++|++++ +|||++++. .+| .+++||+++.++|. .|+|++||++ +|+++ +++|||+|+
T Consensus 853 ~~~~~i~Eaqf~dF~~~aQ~~~DQ~i~~~~-~k~----~~~~~vv~~lp~G~-~G~G~~Hs~~~~E~~l~l~~~pnm~V~ 926 (1113)
T 2xt6_A 853 PDAMVLWEAQFGDFVNGAQSIIDEFISSGE-AKW----GQLSDVVLLLPHGH-EGQGPDHTSGRIERFLQLWAEGSMTIA 926 (1113)
T ss_dssp TTSEEEEECSSGGGGGGGHHHHHHTTTTHH-HHH----CCCCCCEEEEECCC-SSSCTTSSCCCHHHHHHHCCTTSCEEE
T ss_pred CCCceEEEEEEHHHHhhhHHHHHHHHHHHH-HHh----CCCCCEEEEeCCCC-CCCChhhhcccHHHHHhcCCCCCcEEE
Confidence 6778898889999887 999998863 223 25899999998766 5699999885 88777 999999999
Q ss_pred eeCCHHHHHHHHHHhHhCC--CcEEEEeCccccCcccCccc--cccCCCccccCCceEE---eeeCCcE--EEEEechhH
Q 020510 180 SPYSSEDARGLLKAAIRDP--DPVVFLENELLYGESFPVSA--EVLDSSFCLPIGKAKI---EREGKDV--TITAFSKIV 250 (325)
Q Consensus 180 ~P~d~~e~~~~l~~a~~~~--~Pv~ir~~~~l~~~~~p~~~--~~~~~~~~~~~gk~~v---l~~G~dv--~Iia~G~~~ 250 (325)
+|+|+.|++.+|+.++..+ +|+||+++|.+|+.+.+... +..++.+..++|++++ +++|+|+ +||++|.+
T Consensus 927 ~Ps~~~~~~~lLr~a~~~~~~~Pvii~~pk~L~R~~~~~~~~~~~~~~~f~~~ig~~~~~~~l~~g~dv~r~iv~~G~~- 1005 (1113)
T 2xt6_A 927 MPSTPANYFHLLRRHGKDGIQRPLIVFTPKSMLRNKAAVSDIRDFTESKFRSVLEEPMYTDGEGDRNKVTRLLLTSGKI- 1005 (1113)
T ss_dssp CCSSHHHHHHHHHHHHHSSCCCCEEEEECSGGGSCSSSCBCHHHHHSCCCCSEECCHHHHTSCCCSTTCCEEEEECSTH-
T ss_pred ecCCHHHHHHHHHHHHhccCCCCEEEEechHHhCCCCCCCcccccCCCCccccCCcceeeccccCccccCEEEEEECHH-
Confidence 9999999999999988754 89999999998876432211 1112234447899887 7899999 99999998
Q ss_pred HHHHHHHHHHHhcC-CcEEEEEeeeccCCCHHHHHHHHhCCCe---EEEEecCCCCCCHHHHHHHHHcC
Q 020510 251 GLSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVRKTNR---LVTVEEGFPQHGVGAEIWCAFFP 315 (325)
Q Consensus 251 ~~a~~Aa~~L~~~G-i~~~Vi~~~~l~P~d~~~l~~~~~~~~~---vvvvEe~~~~GGlg~~v~~~l~~ 315 (325)
..++++++ +++| ++++|||+++|+|||.++|.++++++++ |||+||+..+||+|+.|++.|.+
T Consensus 1006 ~~~l~aa~--~~~g~i~v~VIdl~~l~Pld~~~i~~~~~k~~~~~~vv~veE~~~~gG~gs~v~~~l~e 1072 (1113)
T 2xt6_A 1006 YYELAARK--AKENREDVAIVRIEQLAPLPRRRLAETLDRYPNVKEKFWVQEEPANQGAWPSFGLTLPE 1072 (1113)
T ss_dssp HHHHHHHH--HHHTCTTEEEEEESEEESCCHHHHHHHHTTCTTCCEEEEEEEEETTSTTHHHHHHHHHH
T ss_pred HHHHHHHH--HhCCCCCEEEEEeeeecCCCHHHHHHHHHhCCCCceEEEEecCCCCCCcHHHHHHHHHH
Confidence 77777766 5678 9999999999999999999999999988 99999999999999999999976
No 23
>2qtc_A Pyruvate dehydrogenase E1 component; thiamin diphosphate, glycolysis, MAG metal-binding, oxidoreductase, thiamine pyrophosphate; HET: TDK; 1.77A {Escherichia coli} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2qta_A* 1l8a_A* 1rp7_A* 2g25_A* 2g28_A* 2g67_A 2iea_A* 3lpl_A* 3lq2_A* 3lq4_A*
Probab=100.00 E-value=1.2e-38 Score=333.73 Aligned_cols=265 Identities=15% Similarity=0.169 Sum_probs=208.3
Q ss_pred cccccHHHHHHHHHHHHHhcC---CcEEEEecCCCC-c--------cCccc-cchhHH-----------HHhCCCceeec
Q 020510 34 VKQMMVREALNSALDEEMSAD---PKVFLMGEEVGE-Y--------QGAYK-ISKGLL-----------EKYGPERVLDT 89 (325)
Q Consensus 34 ~~~~s~~~a~~~~L~~l~~~d---~~iv~l~~D~~~-~--------~g~~~-~~~~~~-----------~~~gp~R~i~~ 89 (325)
++++++|++|+++|.++++++ ++||++++|++. . .+++. ....|. +.| |+||||+
T Consensus 489 ~~~~atr~afg~~L~~l~~~~~~~~~iV~i~pd~~~~~G~~dl~~S~~i~~~~~~~f~~~d~~~~~~~~e~~-~~R~~d~ 567 (886)
T 2qtc_A 489 SKEISTTIAFVRALNVMLKNKSIKDRLVPIIADEARTFGMEGLFRQIGIYSPNGQQYTPQDREQVAYYKEDE-KGQILQE 567 (886)
T ss_dssp SSCBCHHHHHHHHHHHHTTCTTTTTTEEEEESSCSGGGTCHHHHHHHCBBCC-----------------CBT-TCCBEEC
T ss_pred CCcchHHHHHHHHHHHHHhhcccCCcEEEEcCccccccCcccccccccccccCCcccccccchhhhhhhhcC-CCceeee
Confidence 367899999999999999998 999999999763 1 11110 012342 577 9999999
Q ss_pred hhhHHHH-H---HHHHHHhccC--CeeEEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCC-C-CCCCCCC
Q 020510 90 PITEAGF-T---GIGVGAAYYG--LKPVVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNG-A-AAGVGAQ 161 (325)
Q Consensus 90 GIaE~~~-v---g~A~GlA~~G--~~p~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G-~-~~g~G~t 161 (325)
||+|++| + ++|+|+|+.| ++||+.+++.|.++|++|||++++++ ++.++++.+..+ . .+++|+|
T Consensus 568 GIaE~~a~~~~~g~a~GlA~~G~~~~P~~~~ys~F~~qRa~Dqi~~~~d~--------~~~~v~l~~~~~~~~~g~dG~t 639 (886)
T 2qtc_A 568 GINELGAGCSWLAAATSYSTNNLPMIPFYIYYSMFGFQRIGDLCWAAGDQ--------QARGFLIGGTSGRTTLNGEGLQ 639 (886)
T ss_dssp CSCHHHHHHHHHHHHTHHHHTSCCCEEEEEEEGGGSHHHHHHHHHHHHHT--------TCCCEEEEESCSTTTSTTTCTT
T ss_pred ccCchhhhhHHHHHHHHHHhcCCCceEEEEEehHHHHHHHHHHHHHHHHH--------hcCCEEEEEecCcccCCCCCCc
Confidence 9999995 5 6999999999 89998777444499999999999986 577888876543 3 3569999
Q ss_pred cch-HHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhC-CCc----EEEEeCccccCcccCccccccCCC-ccccCCceEE
Q 020510 162 HSH-CYAAWYASVPGLKVLSPYSSEDARGLLKAAIRD-PDP----VVFLENELLYGESFPVSAEVLDSS-FCLPIGKAKI 234 (325)
Q Consensus 162 Hs~-~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~-~~P----v~ir~~~~l~~~~~p~~~~~~~~~-~~~~~gk~~v 234 (325)
|++ .++++++++|||+|+.|+|+.|++.+++++++. ++| +++|.++.. .++.. +.++++. +.+ +|++++
T Consensus 640 Hq~~~~~a~lr~iPnl~V~~Pada~E~~~~l~~al~~~~gP~~e~v~i~~~r~~--~~~~~-p~~~~~~~~~~-~gga~v 715 (886)
T 2qtc_A 640 HEDGHSHIQSLTIPNCISYDPAYAYEVAVIMHDGLERMYGEKQENVYYYITTLN--ENYHM-PAMPEGAEEGI-RKGIYK 715 (886)
T ss_dssp TCCSCHHHHHTTSTTEEEECCSSHHHHHHHHHHHHHHHHSTTCCCCEEEEECCS--CCBCC-CCCCTTCHHHH-HHTCEE
T ss_pred cCCcchHHHHhhCCCCEEEecCCHHHHHHHHHHHHHhcCCCCCceEEEEEeCCc--cccCC-CCCCcchhhhc-cCceEE
Confidence 965 677999999999999999999999999999996 679 999987642 01100 2223222 234 788999
Q ss_pred eeeC----CcEEEEEechhHHHHHHHHHHHHhc-CCcEEEEEeeeccCCCHHH-------------------HHHHHhCC
Q 020510 235 EREG----KDVTITAFSKIVGLSLKAAEILAKE-GISAEVINLRSIRPLDRST-------------------INASVRKT 290 (325)
Q Consensus 235 l~~G----~dv~Iia~G~~~~~a~~Aa~~L~~~-Gi~~~Vi~~~~l~P~d~~~-------------------l~~~~~~~ 290 (325)
+++| .|++||++|+++++|++|++.|+++ ||+++|||++|++|||.++ +.+.+..
T Consensus 716 lr~g~~~~~dVtLia~G~~v~~al~AAe~L~~e~GI~a~Vvd~~sl~pLD~e~i~~~kt~rl~p~~~~~~~~~e~~l~~- 794 (886)
T 2qtc_A 716 LETIEGSKGKVQLLGSGSILRHVREAAEILAKDYGVGSDVYSVTSFTELARDGQDCERWNMLHPLETPRVPYIAQVMND- 794 (886)
T ss_dssp EEEECCSSEEEEEEECGGGHHHHHHHHHHHHHHHCEEEEEEECSCHHHHHHHHHHHHHHHHHCTTSCCCCCHHHHHCCS-
T ss_pred EEecCCCCCCEEEEeCcHHHHHHHHHHHHHhhhhCCceEEEECCcCcccchHHHHHhhhcccCccccccHHHHHHhcCC-
Confidence 9987 7999999999999999999999999 9999999999999999986 3444444
Q ss_pred CeEEEEecCCCCCCHHHHHHHHHc
Q 020510 291 NRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 291 ~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
+.+|++|++.. |+++.+.+++.
T Consensus 795 ~~vVa~ed~~~--g~~~~~~~~~~ 816 (886)
T 2qtc_A 795 APAVASTDYMK--LFAEQVRTYVP 816 (886)
T ss_dssp SCEEEECSSCT--HHHHTTGGGCC
T ss_pred CCEEEEEeccc--chHHHHHHHcC
Confidence 56788888765 68777766654
No 24
>3ahc_A Phosphoketolase, xylulose 5-phosphate/fructose 6-phosphate phospho; thiamine diphosphate-dependent enzyme, alpha-beta fold; HET: TPP 2PE; 1.70A {Bifidobacterium breve} PDB: 3ahd_A* 3ahe_A* 3ahf_A* 3ahj_A* 3ahi_A* 3ahh_A* 3ahg_A* 3ai7_A*
Probab=100.00 E-value=5.2e-36 Score=309.39 Aligned_cols=264 Identities=10% Similarity=0.096 Sum_probs=207.0
Q ss_pred cccHHHHHHHHHHHHHhcCCc-EEEEecCCCCccCccccchhHHHH---------hC-C--------CceeechhhHHHH
Q 020510 36 QMMVREALNSALDEEMSADPK-VFLMGEEVGEYQGAYKISKGLLEK---------YG-P--------ERVLDTPITEAGF 96 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~-iv~l~~D~~~~~g~~~~~~~~~~~---------~g-p--------~R~i~~GIaE~~~ 96 (325)
+...+.+++++|.++++++++ ++++++|+..|+.+ ..|.+. +. | +|||+ ||+|++|
T Consensus 428 ~~~atra~g~~L~~l~~~~p~~~vv~sADl~~Sn~t----~~f~~~t~~~~~~~~~~~P~d~~~~~~GR~i~-GI~Eh~M 502 (845)
T 3ahc_A 428 QVEAPRALGAYCRDIIKNNPDSFRIFGPDETASNRL----NATYEVTDKQWDNGYLSGLVDEHMAVTGQVTE-QLSEHQC 502 (845)
T ss_dssp EECTHHHHHHHHHHHHHHSTTTEEEEESSCTTTTTC----GGGGGTCCEECCSCCCCTTTCCSEESSCSEEE-CSCHHHH
T ss_pred chhHHHHHHHHHHHHHHhCCCcEEEEecCCCccccH----HHHHhhcccccccccccCCcccccCCCCcEee-eecHHHH
Confidence 455678889999999999999 99999999877655 333333 31 4 89999 9999999
Q ss_pred HHHHHHHhccCCeeEEecccccHH--HHHHHH----HHHHHhhccccCCCCccC-CEEEEeC-CCCC-CCCCCCcchH--
Q 020510 97 TGIGVGAAYYGLKPVVEFMTFNFS--MQAIDH----IINSAAKSNYMSSGQISV-PIVFRGP-NGAA-AGVGAQHSHC-- 165 (325)
Q Consensus 97 vg~A~GlA~~G~~p~v~~~~~~f~--~ra~dq----i~~~~a~~~~~~~~~~~~-pvv~~~~-~G~~-~g~G~tHs~~-- 165 (325)
++++.|+|+.|.+||+.++++|+. .|+++| ||++++.+.|+. +. ++.++.. +|.. +.+|+|| |+
T Consensus 503 ~gia~Glal~G~~~f~~t~atFl~~~~~a~~q~akwiR~a~a~~~wr~----~~~~v~~v~Th~si~~GeDGpTH-Q~~e 577 (845)
T 3ahc_A 503 EGFLEAYLLTGRHGIWSSYESFVHVIDSMLNQHAKWLEATVREIPWRK----PISSVNLLVSSHVWRQDHNGFSH-QDPG 577 (845)
T ss_dssp HHHHHHHHHTTCEEEEEEEHHHHGGGHHHHHHHHHHHHHHHHHCTTSC----CCBCEEEEEESCGGGCTTTCGGG-CCCT
T ss_pred HHHHHHHHhcCCCCceecchhhhchhhhHHHHHHHHHHhhHHhhhhcc----cCCceEEEEeCCceeecCCCCCC-CCcH
Confidence 999999999999999999877654 899999 999855543432 33 4555544 4655 4599999 65
Q ss_pred HHH--HHh---cCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEEe-CccccCcccCccccccCCCc---cccCCceEEe-
Q 020510 166 YAA--WYA---SVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE-NELLYGESFPVSAEVLDSSF---CLPIGKAKIE- 235 (325)
Q Consensus 166 ~~a--~~~---~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~-~~~l~~~~~p~~~~~~~~~~---~~~~gk~~vl- 235 (325)
++. .++ .+|||+|+.|+|..|+..+++.+++.++|++++. +|. +. +.+++.++ .+..|++.+.
T Consensus 578 ~~d~l~~~r~~~iPn~~V~~PaDanet~~a~~~al~~~~~~~v~v~sRq----~~---p~~~~~~~a~~~~~~G~~v~~~ 650 (845)
T 3ahc_A 578 VTSLLINKTFNNDHVTNIYFATDANMLLAISEKCFKSTNKINAIFAGKQ----PA---PTWVTLDEARAELEAGAAEWKW 650 (845)
T ss_dssp HHHHHGGGCCTTCCCEEEEECCSHHHHHHHHHHHHHCBSCEEEEECCCS----CE---EECSCHHHHHHHHHHSEEECTT
T ss_pred HHHHHHHhhccCCCCeEEEeCCCHHHHHHHHHHHHHcCCCeEEEEecCC----CC---CccCCchhhhhhhcCCeEEEEe
Confidence 443 333 7899999999999999999999999988888875 443 22 23333332 3567777776
Q ss_pred --ee--C--CcEEEEEechh-HHHHHHHHHHHHhcCCcEEEEEeeec---cCCCHHHHHHHHhCCCeEEEEecCCC--CC
Q 020510 236 --RE--G--KDVTITAFSKI-VGLSLKAAEILAKEGISAEVINLRSI---RPLDRSTINASVRKTNRLVTVEEGFP--QH 303 (325)
Q Consensus 236 --~~--G--~dv~Iia~G~~-~~~a~~Aa~~L~~~Gi~~~Vi~~~~l---~P~d~~~l~~~~~~~~~vvvvEe~~~--~G 303 (325)
++ | .|++||++|+. +.+|++|++.|+++||+++|||+.+| +|.+++.+....+.++.|+|+|+|.+ .|
T Consensus 651 as~d~~g~~~DVvLiAtGsev~~EAL~AA~~L~~~GI~vRVVsm~~lf~lqp~~~~~~~ls~~~~~~l~T~e~h~i~~~g 730 (845)
T 3ahc_A 651 ASNAENNDEVQVVLASAGDVPTQELMAASDALNKMGIKFKVVNVVDLLKLQSRENNDEALTDEEFTELFTADKPVLFAYH 730 (845)
T ss_dssp TCCCSSTTTCSEEEEEESHHHHHHHHHHHHHHHHTTCCEEEEEECBGGGGSCTTTCTTSCCHHHHHHHHCSSSCEEEEES
T ss_pred ecccccCCCCCEEEEEeccHHHHHHHHHHHHHHhCCCCEEEEEeCCCCccCCccccccccCHHHhCcEeecCCcceeeec
Confidence 45 5 89999999965 56699999999999999999999999 67765544434556678999999987 69
Q ss_pred CHHHHHHHHHcCC
Q 020510 304 GVGAEIWCAFFPP 316 (325)
Q Consensus 304 Glg~~v~~~l~~~ 316 (325)
|+++.|++.+.++
T Consensus 731 GlgsaV~ell~~r 743 (845)
T 3ahc_A 731 SYAQDVRGLIYDR 743 (845)
T ss_dssp SCHHHHHHHTTTS
T ss_pred CcHHHHHHHHHhC
Confidence 9999999999987
No 25
>1yd7_A 2-keto acid:ferredoxin oxidoreductase subunit alpha; structural genomics, southeast collaboratory for structural genomics, secsg; 2.30A {Pyrococcus furiosus}
Probab=99.95 E-value=8.1e-28 Score=232.99 Aligned_cols=260 Identities=18% Similarity=0.158 Sum_probs=103.5
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHH---HhCCCceeechhhHHHHHHHHHHHhccCCeeE
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLE---KYGPERVLDTPITEAGFTGIGVGAAYYGLKPV 111 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~---~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~ 111 (325)
..++-.+|+++++.. .+.+++..-+-. .++.. .+.|.+ ++ ..+|+++. +|++++++|.|+|+.|.||+
T Consensus 21 ~~~~GneAva~~~~~---ag~~~v~~yPgt-P~t~i---~~~l~~~~~~~-g~~~i~~e-~E~~a~~~a~Gaa~aG~r~~ 91 (395)
T 1yd7_A 21 DFIQGDEAIARAAIL---AGCRFYAGYPIT-PASEI---FEAMALYMPLV-DGVVIQME-DEIASIAAAIGASWAGAKAM 91 (395)
T ss_dssp EEEEHHHHHHHHHHH---HTCCEEEECCBT-TTBCH---HHHHHHHGGGG-TCEEEECS-CHHHHHHHHHHHHHTTCCEE
T ss_pred EEeEHHHHHHHHHHH---cCCCEEEEEECc-chHHH---HHHHHHhhhhc-CcEEEEeC-CHHHHHHHHHHHHHhCCcEE
Confidence 456788999888765 466777766522 22222 244544 56 36899986 99999999999999999999
Q ss_pred EecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCC----CCCCcchHHHHHHhcCC--CcEEEeeCCHH
Q 020510 112 VEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAG----VGAQHSHCYAAWYASVP--GLKVLSPYSSE 185 (325)
Q Consensus 112 v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g----~G~tHs~~~~a~~~~iP--~~~V~~P~d~~ 185 (325)
++++++ ++.+++|||.+. + ..++|+|++...+...+ ....|++...+++.+.| ++.++.|++++
T Consensus 92 ~~ts~~-G~~~~~d~l~~a-a--------~~~~P~Vi~~~~~~~~~~g~~~~~~~sd~~~~~~~~~g~~g~~vl~p~~~q 161 (395)
T 1yd7_A 92 TATSGP-GFSLMQENIGYA-V--------MTETPVVIVDVQRSGPSTGQPTLPAQGDIMQAIWGTHGDHSLIVLSPSTVQ 161 (395)
T ss_dssp EEEETT-HHHHHTTTCC-------------CCCCEEEEEEC--------------------------CCCCEEECCCSHH
T ss_pred EEeCch-HHHHHHHHHHHH-H--------hcCCCEEEEEeeCCCCCCCCCcccchhHHHHHHhccCCCcceEEEeCCCHH
Confidence 999855 456699999763 3 26899999876533322 22234444457778866 99999999999
Q ss_pred HHHHHHHHhH----hCCCcEEEEeCccccCcc----cCcccccc----------C---CCccc--cC--------Cc---
Q 020510 186 DARGLLKAAI----RDPDPVVFLENELLYGES----FPVSAEVL----------D---SSFCL--PI--------GK--- 231 (325)
Q Consensus 186 e~~~~l~~a~----~~~~Pv~ir~~~~l~~~~----~p~~~~~~----------~---~~~~~--~~--------gk--- 231 (325)
|+++++.+|+ +.+.||+++++..++... .+...++. . .+|.. +. |.
T Consensus 162 ea~~l~~~A~~lA~~~~~PVi~~~~~~l~h~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pg~~~~ 241 (395)
T 1yd7_A 162 EAFDFTIRAFNLSEKYRTPVILLTDAEVGHMRERVYIPNPDEIEIINRKLPRNEEEAKLPFGDPHGDGVPPMPIFGKGYR 241 (395)
T ss_dssp HHHHHHHHHHHHHHHHTSEEEEEECHHHHHCEEEEEECCGGGSCCCCCC-------------------------------
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEcchhHhCeeceecCCChHHhhhhcccccCCCcccccCcccCCCCCCCCCccCCCCce
Confidence 9999999999 457899999875432110 00000000 0 00111 00 00
Q ss_pred ------------------------------------------e-EEeeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEE
Q 020510 232 ------------------------------------------A-KIEREGKDVTITAFSKIVGLSLKAAEILAKEGISAE 268 (325)
Q Consensus 232 ------------------------------------------~-~vl~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~ 268 (325)
. .+.++|.|++||++|+++..+++|++.|+++|++++
T Consensus 242 ~~~~~~~h~e~g~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~g~dv~iva~G~~~~~~~eA~~~L~~~Gi~v~ 321 (395)
T 1yd7_A 242 TYVTGLTHDEKGRPRTVDREVHERLIKRIVEKIEKNKKDIFTYETYELEDAEIGVVATGIVARSALRAVKMLREEGIKAG 321 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEecccccccccCcccCCHHHHHHHHHHHHHHHHHHHhhcCccEEecCCCCCEEEEEECccHHHHHHHHHHHHHcCCceE
Confidence 0 112457899999999999999999999999999999
Q ss_pred EEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcC
Q 020510 269 VINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFP 315 (325)
Q Consensus 269 Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~ 315 (325)
||++++++|||.+.|.++++++++|+|+||+. ||++++|++.+.+
T Consensus 322 vi~~r~~~Pld~~~i~~~~~~~~~vvvvEe~~--G~l~~~v~~~~~~ 366 (395)
T 1yd7_A 322 LLKIETIWPFDFELIERIAERVDKLYVPEMNL--GQLYHLIKEGANG 366 (395)
T ss_dssp -----------------------------------------------
T ss_pred EEEeCeecCCCHHHHHHHHhcCCEEEEEeCCc--hHHHHHHHHHhcC
Confidence 99999999999999999999999999999997 9999999998865
No 26
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=99.83 E-value=2.9e-19 Score=193.30 Aligned_cols=261 Identities=15% Similarity=0.101 Sum_probs=179.3
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHH-----HhCCCceeechhhHHHHHHHHHHHhccCCee
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLE-----KYGPERVLDTPITEAGFTGIGVGAAYYGLKP 110 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~-----~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p 110 (325)
-++-.+|++... ....+++..-+ ...++...-....+.+ .||..+.+...++|.++++++.|+|.+|.|+
T Consensus 6 ~~~GNeAvA~~a----~ag~~~~~~YP-ITPstei~e~l~~~~~~g~~~~~G~~~~v~~~esE~aA~~aaiGAa~aGaR~ 80 (1231)
T 2c42_A 6 TTDGNTATAHVA----YAMSEVAAIYP-ITPSSTMGEEADDWAAQGRKNIFGQTLTIREMQSEAGAAGAVHGALAAGALT 80 (1231)
T ss_dssp EEEHHHHHHHHH----HHHCSEEEECC-CTTTHHHHHHHHHHHHHTCCCTTSCCCEEEECSSHHHHHHHHHHHHHTTCCE
T ss_pred EccHHHHHHHHH----HHCCCEEEEEC-CCCchHHHHHHHHHHHcCCchhcCCceEEEecCChHHHHHHHHHHHHcCChH
Confidence 456677877764 23467777655 2233322111111222 3666689999999999999999999999999
Q ss_pred EEecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCC--CCCCC--CCCCcchHHHHHHhcCCCcEEEeeCCHHH
Q 020510 111 VVEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPN--GAAAG--VGAQHSHCYAAWYASVPGLKVLSPYSSED 186 (325)
Q Consensus 111 ~v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~--G~~~g--~G~tHs~~~~a~~~~iP~~~V~~P~d~~e 186 (325)
+++|. +..+..+.|.|.. ++. ..+|+|++.+. |++.+ ....|+ +.++...+|+.|++|+|++|
T Consensus 81 ~t~Ts-~~Gl~lm~e~l~~-~ag--------~~~P~Vi~va~R~g~~~glsi~~~hs---d~~~ar~~G~~vl~pss~QE 147 (1231)
T 2c42_A 81 TTFTA-SQGLLLMIPNMYK-ISG--------ELLPGVFHVTARAIAAHALSIFGDHQ---DIYAARQTGFAMLASSSVQE 147 (1231)
T ss_dssp EEEEC-HHHHHHHHHHHHH-HHH--------TTCCCEEEEEECCCCSSSBCCSCCSH---HHHTTTTSSCEEEECCSHHH
T ss_pred hhhcc-HHHHHHHHHHHHH-HhC--------CCCCEEEEECCCCccCCCCcCCCchh---hHHHHhcCCcEEEECCCHHH
Confidence 99987 5556667788754 332 36899988764 33322 334553 24567889999999999999
Q ss_pred HHHHHHHhHh----CCCcEEEEeCccccCc---c--cCcccc---c-------------cCCCccccCCc----------
Q 020510 187 ARGLLKAAIR----DPDPVVFLENELLYGE---S--FPVSAE---V-------------LDSSFCLPIGK---------- 231 (325)
Q Consensus 187 ~~~~l~~a~~----~~~Pv~ir~~~~l~~~---~--~p~~~~---~-------------~~~~~~~~~gk---------- 231 (325)
+++++..|++ .+.||+++.+..++.. + .|...+ + .+.+.....|.
T Consensus 148 a~dl~~~Af~lAek~~~PVi~~~Dg~~~sh~~~~vev~~~~~~~~~~~~~~~~~~~~~~~~p~~p~~~g~a~~~~~~~~~ 227 (1231)
T 2c42_A 148 AHDMALVAHLAAIESNVPFMHFFDGFRTSHEIQKIEVLDYADMASLVNQKALAEFRAKSMNPEHPHVRGTAQNPDIYFQG 227 (1231)
T ss_dssp HHHHHHHHHHHHHHHCCCEEEEEETTTTTTCEEEEECCCHHHHHHTSCHHHHHHHHHHSCCTTSCCEESCBCCTTTHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCcccccceeeeecCCHHHHHhhcChhhhhhccccccCCCCceecCCCcCcchhhhh
Confidence 9999998854 6889999987643321 0 000000 0 00000011111
Q ss_pred --------------------------------eEE-eeeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCC
Q 020510 232 --------------------------------AKI-EREGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL 278 (325)
Q Consensus 232 --------------------------------~~v-l~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~ 278 (325)
.+. -.++.|++||++|+++..+++|++.|+++|++++||++++++||
T Consensus 228 ~e~~~~~~~~~~~~v~~~~~k~~~~~g~~y~~~e~~g~~dAd~vIVa~Gs~~~~~~eAv~~L~~~G~kvgvl~lr~~rPf 307 (1231)
T 2c42_A 228 REAANPYYLKVPGIVAEYMQKVASLTGRSYKLFDYVGAPDAERVIVSMGSSCETIEEVINHLAAKGEKIGLIKVRLYRPF 307 (1231)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHHSCCCCSEEEEECTTCSEEEEECSTHHHHHHHHHHHHHTTTCCEEEEEESEEESC
T ss_pred HhhhhhhhHhhHHHHHHHHHHHHHHhcccccceeeecCCCCCEEEEEeCHHHHHHHHHHHHHHhcCCceEEEEEEEeCCC
Confidence 121 14578999999999999999999999999999999999999999
Q ss_pred CHHHHHHHH-hCCCeEEEEecCCCCC----CHHHHHHHHHc
Q 020510 279 DRSTINASV-RKTNRLVTVEEGFPQH----GVGAEIWCAFF 314 (325)
Q Consensus 279 d~~~l~~~~-~~~~~vvvvEe~~~~G----Glg~~v~~~l~ 314 (325)
|.+.|.+++ ++.++|+|+|+....| -+..+|...+.
T Consensus 308 p~~~i~~~l~~~~k~i~VvE~~~~~g~~G~pl~~dv~~al~ 348 (1231)
T 2c42_A 308 VSEAFFAALPASAKVITVLDRTKEPGAPGDPLYLDVCSAFV 348 (1231)
T ss_dssp CHHHHHHTSCTTCCEEEEEESSCCTTCSSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHhcCCEEEEEECCCCCCCCcccHHHHHHHHHh
Confidence 999999988 6679999999984332 25556666664
No 27
>3ju3_A Probable 2-oxoacid ferredoxin oxidoreductase, ALP; structural genomics, PSI-2, protein structu initiative; 1.90A {Thermoplasma acidophilum}
Probab=99.63 E-value=7.1e-16 Score=124.62 Aligned_cols=78 Identities=22% Similarity=0.299 Sum_probs=73.1
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHc
Q 020510 236 REGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 236 ~~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
.+|.|++||++|+++..+++|++.|+++|++++|+++++++|||.+.|.++++++++|+|+||+. .|||+++|...+.
T Consensus 11 ~~g~dv~iv~~Gs~~~~a~eA~~~L~~~Gi~v~vi~~r~~~P~d~~~l~~~~~~~~~vvvvE~~~-~G~l~~~i~~~~~ 88 (118)
T 3ju3_A 11 EKEADITFVTWGSQKGPILDVIEDLKEEGISANLLYLKMFSPFPTEFVKNVLSSANLVIDVESNY-TAQAAQMIKLYTG 88 (118)
T ss_dssp CSSCSEEEEEEGGGHHHHHHHHHHHHHTTCCEEEEEECSSCSCCHHHHHHHHTTCSCCCCCCCCC-CCCHHHHHHHHHC
T ss_pred CCCCCEEEEEECccHHHHHHHHHHHHHCCCceEEEEECeEecCCHHHHHHHHcCCCEEEEEECCC-CCcHHHHHHHHcC
Confidence 36789999999999999999999999999999999999999999999999999999999999985 7999999987764
No 28
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=94.33 E-value=0.2 Score=50.20 Aligned_cols=149 Identities=13% Similarity=0.013 Sum_probs=90.2
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhC----CCceeechhhHHHHHHHHHHHhccCCeeE
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYG----PERVLDTPITEAGFTGIGVGAAYYGLKPV 111 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~g----p~R~i~~GIaE~~~vg~A~GlA~~G~~p~ 111 (325)
+++..+++.+.|.+ .+-+.++..+... . ..|.+.+- .=|++- ...|+++..+|.|.|+..-+|-
T Consensus 3 ~~~~a~~lv~~L~~---~GV~~vfg~PG~~----~----~~l~~al~~~~~~i~~i~-~~~E~~Aa~~A~GyAr~tgk~~ 70 (590)
T 1v5e_A 3 KINIGLAVMKILES---WGADTIYGIPSGT----L----SSLMDAMGEEENNVKFLQ-VKHEEVGAMAAVMQSKFGGNLG 70 (590)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEECCCTT----T----HHHHTTSSSTTCCCEEEE-CSSHHHHHHHHHHHHHTTCCCC
T ss_pred CccHHHHHHHHHHH---cCCCEEEEecCCc----h----HHHHHHHHhcCCCCeEEe-eCCHHHHHHHHHHHHHHHCCCE
Confidence 45666777776654 3566666654211 1 23444331 124555 4899999999999999855443
Q ss_pred Ee-cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcch--HHHHHHhcCCCcEEEeeCCHHH
Q 020510 112 VE-FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSH--CYAAWYASVPGLKVLSPYSSED 186 (325)
Q Consensus 112 v~-~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~--~~~a~~~~iP~~~V~~P~d~~e 186 (325)
++ +.+...+.-++--|.+ |+. .++|++++..+-.. .+.+. + | ....+++.+-.. .+.+.++++
T Consensus 71 v~~~tsGpG~~N~~~gl~~--A~~-------~~vPll~Itg~~p~~~~g~~~-~-Q~~d~~~~~~~~tk~-~~~v~~~~~ 138 (590)
T 1v5e_A 71 VTVGSGGPGASHLINGLYD--AAM-------DNIPVVAILGSRPQRELNMDA-F-QELNQNPMYDHIAVY-NRRVAYAEQ 138 (590)
T ss_dssp EEEECTTHHHHTTHHHHHH--HHH-------HTCCEEEEEEECCGGGTTTTC-T-TCCCCHHHHHTTCSE-EEECCSGGG
T ss_pred EEEeCcChHHHHHHHHHHH--HHh-------cCCCEEEEcCCCCcccCCCCc-c-cccCHHHHHHhhccE-EEEeCCHHH
Confidence 33 2222333334444543 222 57998887643222 22222 2 3 224899998765 677888988
Q ss_pred HHHHHHHhHh----C-CCcEEEEeCccc
Q 020510 187 ARGLLKAAIR----D-PDPVVFLENELL 209 (325)
Q Consensus 187 ~~~~l~~a~~----~-~~Pv~ir~~~~l 209 (325)
+..+++.|++ . ++||+| .+...
T Consensus 139 ~~~~i~~A~~~A~~~~~GPV~l-iP~dv 165 (590)
T 1v5e_A 139 LPKLVDEAARMAIAKRGVAVLE-VPGDF 165 (590)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEE-EETTG
T ss_pred HHHHHHHHHHHHhcCCCceEEE-Eccch
Confidence 8888887776 2 489999 88654
No 29
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=93.09 E-value=1.2 Score=44.11 Aligned_cols=152 Identities=18% Similarity=0.048 Sum_probs=89.8
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEE-e
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVV-E 113 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v-~ 113 (325)
+++..+++.+.|.+. +-+.++..+... ...+.+.+.+ . +=|++.+ ..|+++.-+|.|.|+. |...++ .
T Consensus 3 ~~~~a~~l~~~L~~~---GV~~vfg~PG~~----~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~ 72 (563)
T 2uz1_A 3 MITGGELVVRTLIKA---GVEHLFGLHGAH----IDTIFQACLD-H-DVPIIDT-RHEAAAGHAAEGYARAGAKLGVALV 72 (563)
T ss_dssp EEEHHHHHHHHHHHH---TCCCEEECCCGG----GHHHHHHHHH-H-TCCEEEC-SSHHHHHHHHHHHHHHHTSCEEEEE
T ss_pred ccCHHHHHHHHHHHC---CCCEEEECCCCc----hHHHHHHHHh-c-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEEE
Confidence 456677777777654 444555544111 1223344443 2 2477775 9999999999999988 543333 3
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcc-hHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHS-HCYAAWYASVPGLKVLSPYSSEDARGL 190 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs-~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (325)
|+.+ ...-++--+.+ |+. .++|++++..+-.. .+.|..+. .....+++.+... .+...+++++...
T Consensus 73 TsGp-G~~N~~~~l~~--A~~-------~~~Pll~itg~~~~~~~~~~~~Q~~~d~~~~~~~~tk~-~~~v~~~~~~~~~ 141 (563)
T 2uz1_A 73 TAGG-GFTNAVTPIAN--AWL-------DRTPVLFLTGSGALRDDETNTLQAGIDQVAMAAPITKW-AHRVMATEHIPRL 141 (563)
T ss_dssp CTTH-HHHTTHHHHHH--HHH-------HTCCEEEEEEECCGGGTTSCCTTCCCCHHHHHGGGCSE-EEECCCGGGHHHH
T ss_pred ccCc-cHHHHHHHHHH--HHh-------cCCCEEEEeCCCCcccCCchhhhhhccHHHHhhhhhce-EEEcCCHHHHHHH
Confidence 4433 33434444543 232 57998887643222 22333221 1134899988753 5566778888888
Q ss_pred HHHhHh----C-CCcEEEEeCcc
Q 020510 191 LKAAIR----D-PDPVVFLENEL 208 (325)
Q Consensus 191 l~~a~~----~-~~Pv~ir~~~~ 208 (325)
++.|++ . ++||+|..+..
T Consensus 142 l~~A~~~a~~~~~GPV~l~iP~d 164 (563)
T 2uz1_A 142 VMQAIRAALSAPRGPVLLDLPWD 164 (563)
T ss_dssp HHHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHHHhcCCCCceEEEEeCHH
Confidence 877776 2 58999976654
No 30
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=92.93 E-value=0.84 Score=45.27 Aligned_cols=151 Identities=15% Similarity=0.093 Sum_probs=86.2
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeE-Eec
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPV-VEF 114 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~-v~~ 114 (325)
++..+++.+.|.+. +-+.|+..+... ...+.+.+.+ - .=|++.+ ..|+++.-+|.|.|+. |...+ +.|
T Consensus 11 ~~~a~~l~~~L~~~---GV~~vfg~PG~~----~~~l~~al~~-~-~i~~v~~-~~E~~Aa~~A~Gyar~tg~p~v~~~T 80 (566)
T 1ozh_A 11 AHGADLVVSQLEAQ---GVRQVFGIPGAK----IDKVFDSLLD-S-SIRIIPV-RHEANAAFMAAAVGRITGKAGVALVT 80 (566)
T ss_dssp SCHHHHHHHHHHHH---TCCEEEEECCTT----THHHHHHGGG-S-SSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred CcHHHHHHHHHHHC---CCCEEEEcCCCc----hHHHHHHHHh-C-CCcEEEe-CCHHHHHHHHHHHHHHHCCCEEEEEc
Confidence 45567777776653 455555554211 1122233433 1 2367665 8999999999999987 54333 334
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCCCCCC-Ccch-HHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAAGVGA-QHSH-CYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~g~G~-tHs~-~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
+.+ ...-++--+.+ |+. .++|++++..+-.....|. .|+. ....+++.+... .+...+++++...++
T Consensus 81 sGp-G~~N~~~~l~~--A~~-------~~vPll~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~ 149 (566)
T 1ozh_A 81 SGP-GCSNLITGMAT--ANS-------EGDPVVALGGAVKRADKAKQVHQSMDTVAMFSPVTKY-AIEVTAPDALAEVVS 149 (566)
T ss_dssp STH-HHHTTHHHHHH--HHH-------HTCCEEEEEEECCTTTC------CCCHHHHHGGGCSE-EEECCSGGGHHHHHH
T ss_pred cCh-HHHHHHHHHHH--HHh-------cCCCEEEEeCCCccccCCCCcccccCHHHHHHHHhhe-EEEcCCHHHHHHHHH
Confidence 433 33334444433 222 5799888764322222221 2311 334899988754 456677777777777
Q ss_pred HhHh----C-CCcEEEEeCcc
Q 020510 193 AAIR----D-PDPVVFLENEL 208 (325)
Q Consensus 193 ~a~~----~-~~Pv~ir~~~~ 208 (325)
.|++ . ++||+|..+..
T Consensus 150 ~A~~~A~~~r~GPV~l~iP~d 170 (566)
T 1ozh_A 150 NAFRAAEQGRPGSAFVSLPQD 170 (566)
T ss_dssp HHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHhcCCCCeEEEEeChh
Confidence 6665 2 58999986654
No 31
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=92.73 E-value=1 Score=44.80 Aligned_cols=153 Identities=16% Similarity=0.050 Sum_probs=89.8
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeE-Ee
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPV-VE 113 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~-v~ 113 (325)
.++..+++.+.|.+ .+-+.|+..+... ...+.+.+.+.- .=|++.+ ..|+++..+|.|.|+. |...+ +.
T Consensus 11 ~~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~~~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~ 81 (590)
T 1ybh_A 11 PRKGADILVEALER---QGVETVFAYPGGA----SMEIHQALTRSS-SIRNVLP-RHEQGGVFAAEGYARSSGKPGICIA 81 (590)
T ss_dssp CEEHHHHHHHHHHT---TTCCEEEECCCGG----GHHHHHHHHHCS-SCEECCC-SSHHHHHHHHHHHHHHHSSCEEEEE
T ss_pred CccHHHHHHHHHHH---cCCCEEEEcCCCc----hHHHHHHHhccC-CccEEee-CCHHHHHHHHHHHHHHHCCCEEEEe
Confidence 35666666666654 3556666554211 122333443321 1356664 8999999999999987 54433 33
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLL 191 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l 191 (325)
|+.+ ...-++--|.+ |+. .++|++++..+-.. .+.+..+......+++.+-.. .+...+++++..++
T Consensus 82 TsGp-G~~N~~~gv~~--A~~-------~~vPll~itg~~~~~~~g~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~i~~~l 150 (590)
T 1ybh_A 82 TSGP-GATNLVSGLAD--ALL-------DSVPLVAITGQVPRRMIGTDAFQETPIVEVTRSITKH-NYLVMDVEDIPRII 150 (590)
T ss_dssp CTTH-HHHTTHHHHHH--HHH-------HTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSE-EEECCCGGGHHHHH
T ss_pred ccCc-hHHHHHHHHHH--HHh-------hCCCEEEEeCcCCccccCCCcccccCHHHHHHHHhCe-EEecCCHHHHHHHH
Confidence 4433 33334444433 222 58998887643222 223322212334899988764 56667888899888
Q ss_pred HHhHhC-----CCcEEEEeCcc
Q 020510 192 KAAIRD-----PDPVVFLENEL 208 (325)
Q Consensus 192 ~~a~~~-----~~Pv~ir~~~~ 208 (325)
+.|++. ++||+|..+..
T Consensus 151 ~~A~~~a~~~~~GPV~l~iP~d 172 (590)
T 1ybh_A 151 EEAFFLATSGRPGPVLVDVPKD 172 (590)
T ss_dssp HHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHhhCCCceEEEEeCcc
Confidence 888872 58999976654
No 32
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=92.27 E-value=2.7 Score=41.56 Aligned_cols=152 Identities=16% Similarity=0.111 Sum_probs=87.0
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEecc
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVEFM 115 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v~~~ 115 (325)
++..+++.+.|.+ .+-+.|+..+... ...+.+.+.+.- .=|++.+ ..|+++.-+|.|.|+. |.-.++.|+
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~~~-~i~~i~~-~~E~~Aa~~A~Gyar~tg~~v~~~Ts 73 (568)
T 2wvg_A 3 YTVGTYLAERLVQ---IGLKHHFAVAGDY----NLVLLDNLLLNK-NMEQVYC-CNELNCGFSAEGYARAKGAAAAVVTY 73 (568)
T ss_dssp EEHHHHHHHHHHH---TTCSEEEECCCTT----THHHHHHHHTCT-TSEEEEC-SSHHHHHHHHHHHHHHHSCEEEEECT
T ss_pred cCHHHHHHHHHHH---cCCCEEEeCCCCc----cHHHHHHHhccC-CceEecc-CcHHHHHHHHHHHHHhhCCeEEEEeC
Confidence 4555666666554 3566666654211 112233343221 1367765 9999999999999976 733344455
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCC--Ccc----h--HHHHHHhcCCCcEEEeeCCHH
Q 020510 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA--QHS----H--CYAAWYASVPGLKVLSPYSSE 185 (325)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~--tHs----~--~~~a~~~~iP~~~V~~P~d~~ 185 (325)
.+. ..-++--|.+ |+. .++|++++..+-.. .+.+. +|. | ....+++.+-.. .+...+++
T Consensus 74 GpG-~~N~~~gia~--A~~-------~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk~-~~~v~~~~ 142 (568)
T 2wvg_A 74 SVG-ALSAFDAIGG--AYA-------ENLPVILISGAPNNNDHAAGHVLHHALGKTDYHYQLEMAKNITAA-AEAIYTPE 142 (568)
T ss_dssp TTT-HHHHHHHHHH--HHH-------TTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCCHHHHHHTTSCSC-EEEECSGG
T ss_pred CCC-HHHHHHHHHH--Hhh-------hCCCEEEEeCCCChhHhccCcceeeeccccchHHHHHHHHhhEeE-EEEeCCHH
Confidence 443 3334555544 332 57998887643222 22221 221 2 235899988765 45556777
Q ss_pred HHHHHHHHhHh----CCCcEEEEeCcc
Q 020510 186 DARGLLKAAIR----DPDPVVFLENEL 208 (325)
Q Consensus 186 e~~~~l~~a~~----~~~Pv~ir~~~~ 208 (325)
++...++.|++ .++||+|..+..
T Consensus 143 ~~~~~l~~A~~~A~~~~GPV~l~iP~d 169 (568)
T 2wvg_A 143 EAPAKIDHVIKTALREKKPVYLEIACN 169 (568)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEEEGG
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 76666665554 469999987654
No 33
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=92.06 E-value=1.7 Score=43.57 Aligned_cols=152 Identities=13% Similarity=0.002 Sum_probs=91.1
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEe--
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVE-- 113 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v~-- 113 (325)
++..+++.+.|.+ .+-+.++..+... ...+.+.+.+ .+.=|++. ...|+++..+|.|.|+. |.+|-++
T Consensus 27 ~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~-~~~i~~i~-~~~E~~Aa~~A~GyAr~tgg~~~v~~~ 97 (616)
T 2pan_A 27 MRAVDAAMYVLEK---EGITTAFGVPGAA----INPFYSAMRK-HGGIRHIL-ARHVEGASHMAEGYTRATAGNIGVCLG 97 (616)
T ss_dssp EEHHHHHHHHHHH---TTCCEEEECCCGG----GHHHHHHHHH-HCCCEEEE-CSSHHHHHHHHHHHHHHSTTCCEEEEE
T ss_pred CcHHHHHHHHHHH---CCCCEEEECCCCc----cHHHHHHHHh-cCCCcEEe-eCCHHHHHHHHHHHHHhcCCCceEEEe
Confidence 5667777777753 4666666655211 1223344433 31235665 49999999999999988 4565443
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLL 191 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l 191 (325)
|..+ ...-++.-|.+ +.+ .++|++++..+-.. .+.|..+......+++.+-... +...+++++..++
T Consensus 98 TsGp-G~~N~~~~l~~-A~~--------~~vPlvvItg~~p~~~~~~~~~Q~~d~~~~~~~~tk~~-~~v~~~~~i~~~l 166 (616)
T 2pan_A 98 TSGP-AGTDMITALYS-ASA--------DSIPILCITGQAPRARLHKEDFQAVDIEAIAKPVSKMA-VTVREAALVPRVL 166 (616)
T ss_dssp CSTH-HHHTSHHHHHH-HHH--------TTCCEEEEEEECCGGGTTTTCTTCCCHHHHHGGGSSEE-EECCSGGGHHHHH
T ss_pred CCCc-hHHHHHHHHHH-HHh--------cCCCEEEEecCCcccccCcccccccCHHHHHHHHHHhh-cccCCHHHHHHHH
Confidence 5433 33444555544 222 58998887643222 2223222112348888887654 4556788888888
Q ss_pred HHhHhC-----CCcEEEEeCcc
Q 020510 192 KAAIRD-----PDPVVFLENEL 208 (325)
Q Consensus 192 ~~a~~~-----~~Pv~ir~~~~ 208 (325)
+.|++. ++||+|-.+..
T Consensus 167 ~~A~~~A~~~r~GPV~l~iP~d 188 (616)
T 2pan_A 167 QQAFHLMRSGRPGPVLVDLPFD 188 (616)
T ss_dssp HHHHHHHHSSSCCCEEEEEEHH
T ss_pred HHHHHHHhcCCCceEEEEcchh
Confidence 888762 58999976543
No 34
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=91.99 E-value=2.6 Score=41.47 Aligned_cols=152 Identities=16% Similarity=0.086 Sum_probs=85.9
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeE-Eec
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPV-VEF 114 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~-v~~ 114 (325)
++..+++.+.|.+ .+-+.|+..+ +. ....+.+.+.+ .+.=|++.+ ..|+++.-+|-|.|+. |...+ ++|
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~P--G~--~~~~l~dal~~-~~~i~~i~~-~~E~~Aa~~A~GyAr~tg~~~v~~~T 73 (549)
T 3eya_A 3 QTVAAYIAKTLES---AGVKRIWGVT--GD--SLNGLSDSLNR-MGTIEWMST-RHEEVAAFAAGAEAQLSGELAVCAGS 73 (549)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECC--CG--GGHHHHHHHHH-HCSSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEEEC
T ss_pred ccHHHHHHHHHHH---CCCCEEEEcC--CC--chHHHHHHHHh-cCCCeEEEe-CChHHHHHHHHHHHHHhCCCEEEEeC
Confidence 3455566665544 3555555544 21 11223344443 212366664 8999999999999987 54333 335
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
+.+ ...-++--|.+ |+. .++|++++..+-.. .+.|..+......+++.+-.. .+...+++++...++
T Consensus 74 sGp-G~~N~~~gi~~--A~~-------~~vPvl~itg~~~~~~~~~~~~Q~~d~~~~~~~~tk~-~~~v~~~~~~~~~i~ 142 (549)
T 3eya_A 74 CGP-GNLHLINGLFD--CHR-------NHVPVLAIAAHIPSSEIGSGYFQETHPQELFRECSHY-CELVSSPEQIPQVLA 142 (549)
T ss_dssp TTH-HHHTTHHHHHH--HHH-------TTCCEEEEEEESCGGGTTSCCTTCCCHHHHTSTTCSE-EEECCSGGGHHHHHH
T ss_pred CCC-cHhhhHHHHHH--HHh-------hCCCEEEEeCCCchhhcCCCCCCccCHHHHHhhhhhe-EEEeCCHHHHHHHHH
Confidence 433 33334444433 332 58998887643222 222322212335888888653 445567777776666
Q ss_pred HhHh----CCCcEEEEeCcc
Q 020510 193 AAIR----DPDPVVFLENEL 208 (325)
Q Consensus 193 ~a~~----~~~Pv~ir~~~~ 208 (325)
.|++ .++||+|..+..
T Consensus 143 ~A~~~A~~~~GPV~l~iP~d 162 (549)
T 3eya_A 143 IAMRKAVLNRGVSVVVLPGD 162 (549)
T ss_dssp HHHHHHHHTTSEEEEEEEHH
T ss_pred HHHHHHhhCCCCEEEEeChh
Confidence 6654 578999986644
No 35
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=91.92 E-value=2.6 Score=41.68 Aligned_cols=151 Identities=15% Similarity=0.084 Sum_probs=85.3
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeE-Eec
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPV-VEF 114 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~-v~~ 114 (325)
++..+++.+.|.+ .+-+.|+..+... ...+.+.+.+.- .=|++. ...|+++..+|.|.|+. | ..+ +.|
T Consensus 3 ~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~~~-~i~~v~-~~~E~~Aa~~A~Gyar~tg-~~v~~~T 72 (566)
T 2vbi_A 3 YTVGMYLAERLVQ---IGLKHHFAVAGDY----NLVLLDQLLLNK-DMKQIY-CCNELNCGFSAEGYARSNG-AAAAVVT 72 (566)
T ss_dssp CBHHHHHHHHHHH---HTCSEEEECCCTT----THHHHHHHHTCT-TSEEEE-CSSHHHHHHHHHHHHHHHS-CEEEEEC
T ss_pred cCHHHHHHHHHHH---cCCCEEEeCCCCc----cHHHHHHHhcCC-CCeEEe-eCcHHHHHHHHHHHHhhcC-CeEEEEe
Confidence 4566667666655 3556666654211 112223343221 125666 48999999999999987 7 433 334
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCC--Ccc----h--HHHHHHhcCCCcEEEeeCCH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA--QHS----H--CYAAWYASVPGLKVLSPYSS 184 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~--tHs----~--~~~a~~~~iP~~~V~~P~d~ 184 (325)
+.+. ..-++--|.+ |+. .++|++++..+-.. .+.+. +|. + ....+++.+-- ..+.+.++
T Consensus 73 sGpG-~~N~~~gia~--A~~-------~~vPll~itg~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~tk-~~~~v~~~ 141 (566)
T 2vbi_A 73 FSVG-AISAMNALGG--AYA-------ENLPVILISGAPNSNDQGTGHILHHTIGKTDYSYQLEMARQVTC-AAESITDA 141 (566)
T ss_dssp TTTT-HHHHHHHHHH--HHH-------TTCCEEEEEEECCGGGTTTTCBCTTSCSSSCCTHHHHHHHTTCS-EEEEECSS
T ss_pred CCCC-HHHHHHHHHH--HHh-------hCCCEEEEECCCChHHhccCceeeeeccCcchHHHHHHHhhhEe-EEEEeCCH
Confidence 4333 3334555544 332 57998887643222 22221 231 2 23489998865 34455566
Q ss_pred HHHHHHHHHhHh----CCCcEEEEeCcc
Q 020510 185 EDARGLLKAAIR----DPDPVVFLENEL 208 (325)
Q Consensus 185 ~e~~~~l~~a~~----~~~Pv~ir~~~~ 208 (325)
+++...++.|++ .++||+|..+..
T Consensus 142 ~~~~~~l~~A~~~a~~~~GPV~l~iP~d 169 (566)
T 2vbi_A 142 HSAPAKIDHVIRTALRERKPAYLDIACN 169 (566)
T ss_dssp SSHHHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEechh
Confidence 655555555554 469999987654
No 36
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=91.34 E-value=1.2 Score=44.17 Aligned_cols=152 Identities=12% Similarity=-0.041 Sum_probs=89.3
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEe
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVE 113 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p--~v~ 113 (325)
+++..+++.+.|.+ .+-+.|+..+-... ...+.+.+. + =|++.+ ..|+++.-+|.|.|+..-+| .+.
T Consensus 11 ~~~~a~~l~~~L~~---~GV~~vfg~PG~~~---~~~l~~al~---~-i~~i~~-~~E~~Aa~~A~Gyar~tg~p~v~~~ 79 (573)
T 2iht_A 11 KPTAAHALLSRLRD---HGVGKVFGVVGREA---ASILFDEVE---G-IDFVLT-RHEFTAGVAADVLARITGRPQACWA 79 (573)
T ss_dssp CCCHHHHHHHHHHH---TTCCEEEECCCGGG---GTCCSCSST---T-CEEEEC-SSHHHHHHHHHHHHHHHCSCEEEEE
T ss_pred CccHHHHHHHHHHH---CCCCEEEEecCCcc---hhHHHHHHc---C-CeEEee-CCHHHHHHHHHHHHHHHCCCEEEEE
Confidence 35666777766655 34555555541110 112223333 2 366664 89999999999999884444 333
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCC-CCCcchHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGV-GAQHSHCYAAWYASVPGLKVLSPYSSEDARGL 190 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~-G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (325)
|..+ ...-++.-+.+ |+. .++|++++..+-.. .+. +..|......+++.+... .+...+++++...
T Consensus 80 TsGp-G~~N~~~~v~~--A~~-------~~~Pll~itg~~~~~~~~~~~~~Q~~d~~~~~~~~~k~-~~~v~~~~~~~~~ 148 (573)
T 2iht_A 80 TLGP-GMTNLSTGIAT--SVL-------DRSPVIALAAQSESHDIFPNDTHQCLDSVAIVAPMSKY-AVELQRPHEITDL 148 (573)
T ss_dssp CTTH-HHHHHHHHHHH--HHH-------HTCCEEEEEEESCGGGCCTTTSTTCCCHHHHHGGGSSE-EEECCSGGGHHHH
T ss_pred ccCc-hHHHHHHHHHH--HHh-------hCCCEEEEcccCcccccCCcCccccCCHHHHHHhHhhE-EEEcCCHHHHHHH
Confidence 4433 34445555544 222 57998887644222 233 333322335899988754 4556677778777
Q ss_pred HHHhHh----C-CCcEEEEeCccc
Q 020510 191 LKAAIR----D-PDPVVFLENELL 209 (325)
Q Consensus 191 l~~a~~----~-~~Pv~ir~~~~l 209 (325)
++.|++ . ++||+|..+...
T Consensus 149 i~~A~~~A~~~~~GPV~l~iP~dv 172 (573)
T 2iht_A 149 VDSAVNAAMTEPVGPSFISLPVDL 172 (573)
T ss_dssp HHHHHHHHTBSSCCCEEEEEEHHH
T ss_pred HHHHHHHHhcCCCceEEEEecchH
Confidence 777776 2 489999876543
No 37
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=91.28 E-value=0.8 Score=44.92 Aligned_cols=150 Identities=16% Similarity=0.100 Sum_probs=84.4
Q ss_pred cHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCC-CceeechhhHHHHHHHHHHHhcc-CCeeEEecc
Q 020510 38 MVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGP-ERVLDTPITEAGFTGIGVGAAYY-GLKPVVEFM 115 (325)
Q Consensus 38 s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp-~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v~~~ 115 (325)
+..+++.+.|.+ .+-+.++..+. ... ..|.+.+.+ =|++. ...|+++..+|.|.|+. |...++.+.
T Consensus 3 ~~a~~l~~~L~~---~GV~~vfg~PG------~~~--~~l~~al~~~i~~i~-~~~E~~Aa~~A~Gyar~tg~~~v~~~t 70 (528)
T 1q6z_A 3 SVHGTTYELLRR---QGIDTVFGNPG------SNA--LPFLKDFPEDFRYIL-ALQEACVVGIADGYAQASRKPAFINLH 70 (528)
T ss_dssp BHHHHHHHHHHH---TTCCEEEECCC------GGG--HHHHTTCCTTCEEEE-CSSHHHHHHHHHHHHHHHTSCEEEEEE
T ss_pred cHHHHHHHHHHH---CCCCEEEECCC------cch--HHHHHHHhhcCcEEE-ECcHHHHHHHHHHHHHHhCCCEEEEEc
Confidence 344555555543 35566665542 111 234444311 25665 48999999999999998 655444333
Q ss_pred cccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCC-CcchHHHHHHhcCCCcEEEeeCCHHHHHHHHH
Q 020510 116 TFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA-QHSHCYAAWYASVPGLKVLSPYSSEDARGLLK 192 (325)
Q Consensus 116 ~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~-tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~ 192 (325)
+.....-++.-|.+ |+. .++|++++..+-.. .+.+. +|......+++.+... .+.+.+++++...++
T Consensus 71 sGpG~~N~~~~l~~--A~~-------~~~Pll~itg~~~~~~~~~~~~q~~~d~~~~~~~~~k~-~~~v~~~~~~~~~i~ 140 (528)
T 1q6z_A 71 SAAGTGNAMGALSN--AWN-------SHSPLIVTAGQQTRAMIGVEALLTNVDAANLPRPLVKW-SYEPASAAEVPHAMS 140 (528)
T ss_dssp HHHHHHHTHHHHHH--HHH-------TTCCEEEEEEECCHHHHTTTCTTCCTTGGGSSTTSCSC-EECCSSGGGHHHHHH
T ss_pred CChHHHHHHHHHHH--Hhh-------cCCCEEEEeCCCcccccCCCcccccccHHHHHHHhhHh-hhcCCCHHHHHHHHH
Confidence 22334445555544 332 58998887543222 12222 2211224788877654 455566776666666
Q ss_pred HhHh----C-CCcEEEEeCccc
Q 020510 193 AAIR----D-PDPVVFLENELL 209 (325)
Q Consensus 193 ~a~~----~-~~Pv~ir~~~~l 209 (325)
.|++ . ++||+|..+...
T Consensus 141 ~A~~~a~~~~~GPV~l~iP~d~ 162 (528)
T 1q6z_A 141 RAIHMASMAPQGPVYLSVPYDD 162 (528)
T ss_dssp HHHHHHHSSSCCCEEEEEEGGG
T ss_pred HHHHHHhcCCCCcEEEEechhh
Confidence 6665 2 579999876543
No 38
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=91.08 E-value=5.4 Score=39.38 Aligned_cols=154 Identities=14% Similarity=0.049 Sum_probs=83.3
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCC-ceeechhhHHHHHHHHHHHhcc-CCee-EE
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPE-RVLDTPITEAGFTGIGVGAAYY-GLKP-VV 112 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~-R~i~~GIaE~~~vg~A~GlA~~-G~~p-~v 112 (325)
+++..+++.+.|.+. +-+.|+..+... ...+.+.+.+ . +. +++. ...|+++.-+|.|.|+. |... ++
T Consensus 20 ~~~~a~~lv~~L~~~---GV~~vfg~PG~~----~~~l~~al~~-~-~~~~~i~-~~~E~~Aa~~A~GyAr~tgkp~v~~ 89 (565)
T 2nxw_A 20 HMKLAEALLRALKDR---GAQAMFGIPGDF----ALPFFKVAEE-T-QILPLHT-LSHEPAVGFAADAAARYSSTLGVAA 89 (565)
T ss_dssp CCBHHHHHHHHHHHT---TCCCEEECCCGG----GHHHHHHHHH-H-CSSCEEE-CSSHHHHHHHHHHHHHHHTSCEEEE
T ss_pred CcCHHHHHHHHHHHc---CCCEEEECCCcc----hHHHHHHHHh-C-CCcEEEe-cCcHHHHHHHHHHHHHHhCCCeEEE
Confidence 467777777777653 445455544111 1233344443 3 33 3454 59999999999999987 5433 33
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCC--Ccc-hH---HHHHHhcCCCcEEEeeCCH
Q 020510 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGA--QHS-HC---YAAWYASVPGLKVLSPYSS 184 (325)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~--tHs-~~---~~a~~~~iP~~~V~~P~d~ 184 (325)
.|..+ ...-++--|.+ |+. .++|++++..+-.. .+.+. +|+ |. ...+++.+-... +...++
T Consensus 90 ~TsGp-G~~N~~~gv~~--A~~-------~~vPll~itg~~~~~~~~~~~~~~~~~q~~d~q~~~~~~~~k~~-~~v~~~ 158 (565)
T 2nxw_A 90 VTYGA-GAFNMVNAVAG--AYA-------EKSPVVVISGAPGTTEGNAGLLLHHQGRTLDTQFQVFKEITVAQ-ARLDDP 158 (565)
T ss_dssp ECTTH-HHHTTHHHHHH--HHH-------TTCCEEEEEEECCTTCC--CCCC-------CHHHHHHTTSCSCE-EECCCT
T ss_pred ECCCC-CHHHHHHHHHH--HHh-------hCCCEEEEeCCCChhhhccCcceeeeccchhhHHHHHHhhheEE-EEeCCH
Confidence 34433 33333444433 222 58998887643222 22232 242 22 237888886543 344455
Q ss_pred HHHHHHHHHhHh----CCCcEEEEeCcccc
Q 020510 185 EDARGLLKAAIR----DPDPVVFLENELLY 210 (325)
Q Consensus 185 ~e~~~~l~~a~~----~~~Pv~ir~~~~l~ 210 (325)
+++...++.|++ .++||+|..++.+.
T Consensus 159 ~~~~~~i~~A~~~A~~~~GPV~l~iP~Dv~ 188 (565)
T 2nxw_A 159 AKAPAEIARVLGAARAQSRPVYLEIPRNMV 188 (565)
T ss_dssp TTHHHHHHHHHHHHHHHTCCEEEEEEGGGT
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEECChhhh
Confidence 555555554443 47999998776543
No 39
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=90.12 E-value=1.9 Score=42.96 Aligned_cols=153 Identities=15% Similarity=0.107 Sum_probs=85.9
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEEe
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVVE 113 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~-p~v~ 113 (325)
.++..+++.+.|.+ .+-+.|+..+ +. ....+.+.+.+.-+.=|++.+ ..|+++.-+|.|.|+. |.. ..+.
T Consensus 3 ~~~~a~~l~~~L~~---~GV~~vfg~P--G~--~~~~l~~al~~~~~~i~~v~~-~hE~~Aa~~A~GyAr~tg~p~v~~~ 74 (589)
T 2pgn_A 3 IKRGADLIVEALEE---YGTEQVVGFI--GH--TSHFVADAFSKSHLGKRVINP-ATELGGAWMVNGYNYVKDRSAAVGA 74 (589)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEEEC--SG--GGHHHHHHHHTSTTSTTCBCC-SSHHHHHHHHHHHHHHHTSCCEEEE
T ss_pred CCcHHHHHHHHHHH---cCCCEEEEec--CC--chHHHHHHHHhcCCCCeEEEe-CcHHHHHHHHHHHHHHHCCCEEEEE
Confidence 34566666666654 3455555554 21 111222334321001266665 8999999999999987 532 3444
Q ss_pred cccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCC-CCcchHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 020510 114 FMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG-AQHSHCYAAWYASVPGLKVLSPYSSEDARGL 190 (325)
Q Consensus 114 ~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G-~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (325)
|+.+.. .-++--|.+ |+. .++|++++..+-.. .+.+ ..|...... ++.+... .+...+++++...
T Consensus 75 TsGpG~-~N~~~gv~~--A~~-------~~vPll~itg~~~~~~~~~~~~~Q~~d~~~-~~~~tk~-~~~v~~~~~~~~~ 142 (589)
T 2pgn_A 75 WHCVGN-LLLHAAMQE--ART-------GRIPAVHIGLNSDGRLAGRSEAAQQVPWQS-FTPIARS-TQRVERLDKVGEA 142 (589)
T ss_dssp EEGGGG-GGCHHHHHH--HHH-------TTCCEEEEEEESCGGGTTCTTCSSCCCGGG-GTTTSSE-EEECCSGGGHHHH
T ss_pred ecCchH-HHHHHHHHH--HHh-------cCCCEEEEecCCcccccCCCCcccccChhh-ccccEEE-EeecCCHHHHHHH
Confidence 554433 333344433 222 58998887643222 2333 333112236 8877654 4556677778777
Q ss_pred HHHhHh----C-CCcEEEEeCcc
Q 020510 191 LKAAIR----D-PDPVVFLENEL 208 (325)
Q Consensus 191 l~~a~~----~-~~Pv~ir~~~~ 208 (325)
++.|++ . ++||+|..+..
T Consensus 143 i~~A~~~A~~~~~GPV~l~iP~d 165 (589)
T 2pgn_A 143 IHEAFRVAEGHPAGPAYVDIPFD 165 (589)
T ss_dssp HHHHHHHHTSSSCCEEEEEEETH
T ss_pred HHHHHHHHhcCCCccEEEEeCHh
Confidence 777776 2 48999987654
No 40
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=89.50 E-value=3.6 Score=41.05 Aligned_cols=155 Identities=12% Similarity=0.039 Sum_probs=84.5
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEE-
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVV- 112 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v- 112 (325)
.+++..+++.+.|.+ ..-+.|+..+ +. ....+.+.|.+.-..=|++.+ ..|+++.-+|.|.|+. |...++
T Consensus 9 ~~~~~a~~l~~~L~~---~GV~~vfg~P--G~--~~~~l~dal~~~~~~i~~i~~-~hE~~Aa~aA~GyAr~tg~~gv~~ 80 (603)
T 4feg_A 9 TNILAGAAVIKVLEA---WGVDHLYGIP--GG--SINSIMDALSAERDRIHYIQV-RHEEVGAMAAAADAKLTGKIGVCF 80 (603)
T ss_dssp CEEEHHHHHHHHHHH---TTCCEEEECC--CG--GGHHHHHHHHHTTTTSEEEEC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CeeeHHHHHHHHHHH---CCCCEEEEeC--CC--chHHHHHHHHhccCCCeEEEe-cChHHHHHHHHHHHHHhCCceEEE
Confidence 456677777776654 3555566554 21 112333445432101367764 8999999999999977 543333
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCC--CCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHHH
Q 020510 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARGL 190 (325)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~ 190 (325)
.|+.+ ...-++--|.+ |+. .++|++++..+-... +.+.-+......+++.+-... +...+++++...
T Consensus 81 ~TsGp-G~~N~~~gia~--A~~-------~~vPvl~itG~~~~~~~~~~~~Q~~d~~~~~~~~tk~~-~~v~~~~~~~~~ 149 (603)
T 4feg_A 81 GSAGP-GGTHLMNGLYD--ARE-------DHVPVLALIGQFGTTGMNMDTFQEMNENPIYADVADYN-VTAVNAATLPHV 149 (603)
T ss_dssp ECTTH-HHHTTHHHHHH--HHH-------TTCCEEEEEEECCTTTTTSCCTTCCCCGGGGTTTCSEE-EECCCSTTHHHH
T ss_pred ecCCc-hHHHHHHHHHH--HHH-------cCCCEEEEecCCcccccCCCccccccHHHHhhhhceEE-EEcCCHHHHHHH
Confidence 34433 33334444433 332 589988875432222 222211111237888876533 334455555555
Q ss_pred HHHhHh----CCCcEEEEeCcc
Q 020510 191 LKAAIR----DPDPVVFLENEL 208 (325)
Q Consensus 191 l~~a~~----~~~Pv~ir~~~~ 208 (325)
++.|++ .++||+|-.+..
T Consensus 150 i~~A~~~A~~~~GPV~l~iP~d 171 (603)
T 4feg_A 150 IDEAIRRAYAHQGVAVVQIPVD 171 (603)
T ss_dssp HHHHHHHHHHHTSEEEEEEETT
T ss_pred HHHHHHHHhcCCCCEEEEeChh
Confidence 554444 579999987654
No 41
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=89.45 E-value=3 Score=42.39 Aligned_cols=149 Identities=13% Similarity=0.037 Sum_probs=87.0
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCC---CceeechhhHHHHHHHHHHHhcc-CCe-eE
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGP---ERVLDTPITEAGFTGIGVGAAYY-GLK-PV 111 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp---~R~i~~GIaE~~~vg~A~GlA~~-G~~-p~ 111 (325)
++..+.+.+.|.+ .+-+.|+..+. ... ..|.+.+.. =|++.+ ..|+++.-+|.|.|+. |.. .+
T Consensus 82 ~~~a~~lv~~L~~---~GV~~vFg~PG------~~~--~pl~dal~~~~~i~~v~~-~hE~~Aa~aAdGyAr~tGkpgvv 149 (677)
T 1t9b_A 82 LTGGQIFNEMMSR---QNVDTVFGYPG------GAI--LPVYDAIHNSDKFNFVLP-KHEQGAGHMAEGYARASGKPGVV 149 (677)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECCC------GGG--HHHHHHTTTCSSSEEECC-SSHHHHHHHHHHHHHHHSSCEEE
T ss_pred CCHHHHHHHHHHH---cCCCEEEEecC------ccH--HHHHHHHHhCCCCeEEEe-CChHHHHHHHHHHHHHHCCCEEE
Confidence 3455555555543 35666666541 111 334444411 256664 8999999999999987 643 33
Q ss_pred EecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCC--CCCCCcchHHHHHHhcCCCcEEEeeCCHHHHHH
Q 020510 112 VEFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--GVGAQHSHCYAAWYASVPGLKVLSPYSSEDARG 189 (325)
Q Consensus 112 v~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~~ 189 (325)
+.|+.+ ...-++--|.+ |+. .++|++++..+-... +.+..+......+++.+-... +...+++++..
T Consensus 150 ~~TsGp-G~~N~~~gia~--A~~-------d~vPllvItG~~~~~~~g~~a~Q~~Dq~~i~~~~tk~~-~~v~~~~~i~~ 218 (677)
T 1t9b_A 150 LVTSGP-GATNVVTPMAD--AFA-------DGIPMVVFTGQVPTSAIGTDAFQEADVVGISRSCTKWN-VMVKSVEELPL 218 (677)
T ss_dssp EECSTH-HHHTTHHHHHH--HHH-------HTCCEEEEEEECCTTTTTSCCTTCCCHHHHTGGGSSEE-EECCSGGGHHH
T ss_pred EECCCh-HHHHHHHHHHH--HHH-------cCCCEEEEeCCCChhhcCCCCccccCHHHHhhhheeEE-EEcCCHHHHHH
Confidence 445433 33334444433 222 589988876432222 223222112348888886544 44567888888
Q ss_pred HHHHhHh-----CCCcEEEEeCcc
Q 020510 190 LLKAAIR-----DPDPVVFLENEL 208 (325)
Q Consensus 190 ~l~~a~~-----~~~Pv~ir~~~~ 208 (325)
.++.|++ .++||+|-.+..
T Consensus 219 ~i~~A~~~A~~grpGPV~l~lP~D 242 (677)
T 1t9b_A 219 RINEAFEIATSGRPGPVLVDLPKD 242 (677)
T ss_dssp HHHHHHHHHHSSSCCEEEEEEEHH
T ss_pred HHHHHHHHHhhCCCceEEEEcCHH
Confidence 8888877 258999976644
No 42
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=89.32 E-value=4.5 Score=39.81 Aligned_cols=154 Identities=11% Similarity=0.024 Sum_probs=82.4
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeEEec
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPVVEF 114 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~v~~ 114 (325)
+++..+++.+.|.+ .+-+.|+..+... ...+.+.+.+.- .=|++. ...|+++.-+|.|.|+. |.-..+.|
T Consensus 3 ~~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~~~-~i~~v~-~~~E~~Aa~~A~Gyar~tg~~v~~~T 73 (563)
T 2vk8_A 3 EITLGKYLFERLKQ---VNVNTVFGLPGDF----NLSLLDKIYEVE-GMRWAG-NANELNAAYAADGYARIKGMSCIITT 73 (563)
T ss_dssp EEEHHHHHHHHHHH---TTCCEEEECCCGG----GHHHHHGGGGST-TCEECC-CSSHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred ccCHHHHHHHHHHH---cCCCEEEEcCCcc----hHHHHHHHhhcC-CceEEc-cCchHHHHHHHHHHHHhhCCcEEEEc
Confidence 35566666666654 3556666654211 112223332211 125666 48999999999999987 72233334
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCC----CCCCCc------chHHHHHHhcCCCcEEEeeCCH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA----GVGAQH------SHCYAAWYASVPGLKVLSPYSS 184 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~----g~G~tH------s~~~~a~~~~iP~~~V~~P~d~ 184 (325)
..+ ...-++--|.+ |+. .++|++++..+-... +...+| .|....+++.+-.. .+...++
T Consensus 74 sGp-G~~N~~~gia~--A~~-------~~~Pll~itg~~~~~~~~~~~~~~~~~g~~~~q~~~~~~~~~~k~-~~~v~~~ 142 (563)
T 2vk8_A 74 FGV-GELSALNGIAG--SYA-------EHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISET-TAMITDI 142 (563)
T ss_dssp TTH-HHHHHHHHHHH--HHH-------HTCCEEEEEEECCHHHHHTTCCCTTSCSSSCSSHHHHHHHTTCSE-EEECCCT
T ss_pred CCC-cHHHHHHHHHH--HHh-------hCCCEEEEECCCChHHhhcccccccccCCcchHHHHHHhhhhEEE-EEEeCCH
Confidence 433 33334444543 322 579988875432210 111111 13335889888754 3444554
Q ss_pred HHH----HHHHHHhHhCCCcEEEEeCccc
Q 020510 185 EDA----RGLLKAAIRDPDPVVFLENELL 209 (325)
Q Consensus 185 ~e~----~~~l~~a~~~~~Pv~ir~~~~l 209 (325)
+++ .++++.|...++||+|..+..+
T Consensus 143 ~~~~~~i~~A~~~A~~~~GPV~l~iP~d~ 171 (563)
T 2vk8_A 143 ATAPAEIDRCIRTTYVTQRPVYLGLPANL 171 (563)
T ss_dssp TTHHHHHHHHHHHHHHHTSCEEEEEETTG
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEEechhh
Confidence 444 4445555444699999876554
No 43
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=89.02 E-value=5.3 Score=39.34 Aligned_cols=154 Identities=10% Similarity=0.005 Sum_probs=87.9
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEE
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVV 112 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~-p~v 112 (325)
+.++..+++.+.|.+. +-+.|+..+-. ....+.+.+.+ - .=|++.+ ..|+++.-+|.|.|+. |.. .++
T Consensus 6 ~~~~~a~~l~~~L~~~---GV~~vfg~PG~----~~~~l~~al~~-~-~i~~i~~-~hE~~Aa~~A~Gyar~tg~pgv~~ 75 (564)
T 2q28_A 6 QMTDGMHIIVEALKQN---NIDTIYGVVGI----PVTDMARHAQA-E-GIRYIGF-RHEQSAGYAAAASGFLTQKPGICL 75 (564)
T ss_dssp CEEEHHHHHHHHHHHT---TCCEEEECCCT----TTHHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred ccCcHHHHHHHHHHHc---CCCEEEECCCc----chHHHHHHHHh-C-CCcEEee-CCHHHHHHHHHHHHHHhCCCEEEE
Confidence 3456777777776653 55556655421 11222233432 2 2367775 9999999999999988 543 333
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCC--C--CCCCcchHHHHHHhcCCCcEEEeeCCHHHHH
Q 020510 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--G--VGAQHSHCYAAWYASVPGLKVLSPYSSEDAR 188 (325)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g--~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~ 188 (325)
+|+.+ ...-++--|.+ |+. .++|++++..+-... + .|..+......+++.+-... +...+++++.
T Consensus 76 ~TsGp-G~~N~~~gi~~--A~~-------~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~~-~~v~~~~~~~ 144 (564)
T 2q28_A 76 TVSAP-GFLNGLTALAN--ATV-------NGFPMIMISGSSDRAIVDLQQGDYEELDQMNAAKPYAKAA-FRVNQPQDLG 144 (564)
T ss_dssp ECSHH-HHHHHHHHHHH--HHH-------HTCCEEEEEEECCHHHHHTTSCCTTCCCHHHHHGGGSSEE-EECCSGGGHH
T ss_pred EccCc-hHHHHHHHHHH--HHh-------cCCCEEEEeCCCCccccCCCCCccccccHHHHHHHhhhee-eecCCHHHHH
Confidence 44433 34444444533 222 589988876432221 1 22222112248888886643 4445666666
Q ss_pred HHHHHhHh-----CCCcEEEEeCccc
Q 020510 189 GLLKAAIR-----DPDPVVFLENELL 209 (325)
Q Consensus 189 ~~l~~a~~-----~~~Pv~ir~~~~l 209 (325)
..++.|++ .++||+|-.+..+
T Consensus 145 ~~i~~A~~~A~~~~~GPV~l~iP~dv 170 (564)
T 2q28_A 145 IALARAIRVSVSGRPGGVYLDLPANV 170 (564)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEEHHH
T ss_pred HHHHHHHHHHhcCCCceEEEEcCHHH
Confidence 66666665 3689999876543
No 44
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=88.94 E-value=4.8 Score=39.70 Aligned_cols=154 Identities=12% Similarity=-0.001 Sum_probs=89.1
Q ss_pred ccccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCe-eEE
Q 020510 35 KQMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLK-PVV 112 (325)
Q Consensus 35 ~~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~-p~v 112 (325)
.+++..+++.+.|.+. +-+.|+..+-.. ...+.+.+.+ . .=|++.+ ..|+++.-+|.|.|+. |.. ..+
T Consensus 8 ~~~~~a~~l~~~L~~~---GV~~vfg~PG~~----~~~l~~al~~-~-~i~~i~~-~~E~~Aa~~A~GyAr~tg~pgv~~ 77 (568)
T 2c31_A 8 ELTDGFHVLIDALKMN---DIDTMYGVVGIP----ITNLARMWQD-D-GQRFYSF-RHEQHAGYAASIAGYIEGKPGVCL 77 (568)
T ss_dssp CEEEHHHHHHHHHHHT---TCCEEEECCCTT----THHHHHHHHH-T-TCEEEEC-SSHHHHHHHHHHHHHHHSSCEEEE
T ss_pred CcccHHHHHHHHHHHc---CCCEEEEeCCCc----cHHHHHHHHh-C-CCcEEEe-CcHHHHHHHHHHHHHHhCCCEEEE
Confidence 4566777777777653 555566554211 1222334433 2 2467775 9999999999999988 543 333
Q ss_pred ecccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCCC--C--CCCCcchHHHHHHhcCCCcEEEeeCCHHHHH
Q 020510 113 EFMTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAAA--G--VGAQHSHCYAAWYASVPGLKVLSPYSSEDAR 188 (325)
Q Consensus 113 ~~~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~~--g--~G~tHs~~~~a~~~~iP~~~V~~P~d~~e~~ 188 (325)
.|+.+ ...-++--|.+ |+. .++|++++..+-... + .|..+......+++.+-.. .+...+++++.
T Consensus 78 ~TsGp-G~~N~~~~i~~--A~~-------~~vPll~itg~~~~~~~~~~~~~~Q~~dq~~~~~~~tk~-~~~v~~~~~~~ 146 (568)
T 2c31_A 78 TVSAP-GFLNGVTSLAH--ATT-------NCFPMILLSGSSEREIVDLQQGDYEEMDQMNVARPHCKA-SFRINSIKDIP 146 (568)
T ss_dssp ECSHH-HHHHHHHHHHH--HHH-------HTCCEEEEEEECCHHHHHTTCCCTTCCCHHHHSGGGSSE-EEECCSGGGHH
T ss_pred EcCCc-cHHHHHHHHHH--HHh-------cCCCEEEEccCCCccccCCCCCcccccCHHHHHHhhhhe-eeecCCHHHHH
Confidence 44433 34444454543 222 589988876432221 1 2222211224788888664 44456666776
Q ss_pred HHHHHhHh-----CCCcEEEEeCccc
Q 020510 189 GLLKAAIR-----DPDPVVFLENELL 209 (325)
Q Consensus 189 ~~l~~a~~-----~~~Pv~ir~~~~l 209 (325)
..++.|++ .++||+|-.+..+
T Consensus 147 ~~i~~A~~~A~~~~~GPV~l~iP~dv 172 (568)
T 2c31_A 147 IGIARAVRTAVSGRPGGVYVDLPAKL 172 (568)
T ss_dssp HHHHHHHHHHHSSSCCEEEEEEETHH
T ss_pred HHHHHHHHHhcCCCCceEEEeCCHHH
Confidence 66666665 3589999876553
No 45
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=87.63 E-value=1.9 Score=42.74 Aligned_cols=147 Identities=16% Similarity=0.067 Sum_probs=77.2
Q ss_pred HHHHHHHHH-hcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCee-EEecccccH
Q 020510 43 LNSALDEEM-SADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP-VVEFMTFNF 119 (325)
Q Consensus 43 ~~~~L~~l~-~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p-~v~~~~~~f 119 (325)
.++.|.+.+ +..-+.|+..+-.. ...+.+.+.+ .+.=|++.+ ..|+++.-+|-|.|+. |... .+.|..+ .
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~~----~~~l~dal~~-~~~i~~i~~-~hE~~Aa~aAdGyAr~tG~pgv~~~TsGp-G 85 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGSR----STPLALMMAE-HPILKIYVD-VDERSAGFFALGLAKASKRPVVLLCTSGT-A 85 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTT----THHHHHHHHH-CSSCEEEEC-SSHHHHHHHHHHHHHHHCCCEEEEECSSH-H
T ss_pred HHHHHHHHHHHcCCCEEEECCCCc----cHHHHHHHHh-CCCceEEEe-cCcHHHHHHHHHHHHhhCCCEEEEECCch-h
Confidence 344444444 34566666654111 1223344443 212366765 7999999999999987 5433 3334433 3
Q ss_pred HHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchH-H-HHHHhcCCCcEE--EeeCCHHH----HHH
Q 020510 120 SMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHC-Y-AAWYASVPGLKV--LSPYSSED----ARG 189 (325)
Q Consensus 120 ~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~-~-~a~~~~iP~~~V--~~P~d~~e----~~~ 189 (325)
..-++--|.+ |+. ..+|++++..+-.. .+.|. + |. + ..+++.+-.... -.|.+..+ +..
T Consensus 86 ~~N~~~gia~--A~~-------d~vPll~itG~~p~~~~g~~~-~-Qe~d~~~~~~~~tk~~~~v~~~~~~~~~~~~i~~ 154 (578)
T 3lq1_A 86 AANYFPAVAE--ANL-------SQIPLIVLTADRPHELRNVGA-P-QAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKW 154 (578)
T ss_dssp HHTTHHHHHH--HHH-------TTCCEEEEEEECCGGGTTSSC-T-TCCCCTTTTGGGSSEEEECCCCCCSHHHHHHHHH
T ss_pred hhhhhHHHHH--HHh-------cCCCeEEEeCCCCHHhhcCCC-C-CCcCHhhHHhhheeeEeecCCCCCchHHHHHHHH
Confidence 3333344433 332 58998887643222 12222 2 32 2 377777754433 34555332 223
Q ss_pred HHHHhHh----C-CCcEEEEeCc
Q 020510 190 LLKAAIR----D-PDPVVFLENE 207 (325)
Q Consensus 190 ~l~~a~~----~-~~Pv~ir~~~ 207 (325)
+++.|++ . ++||+|-.+.
T Consensus 155 ~l~~A~~~A~~gr~GPV~l~iP~ 177 (578)
T 3lq1_A 155 HGSRAVDIAMKTPRGPVHLNFPL 177 (578)
T ss_dssp HHHHHHHHHHSSSCCCEEEEEEC
T ss_pred HHHHHHHHhhCCCCCcEEEECcc
Confidence 4444444 2 6899997654
No 46
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=87.50 E-value=3 Score=41.09 Aligned_cols=148 Identities=12% Similarity=0.081 Sum_probs=83.4
Q ss_pred HHHHHHHHHHhc-CCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCee-EEeccccc
Q 020510 42 ALNSALDEEMSA-DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKP-VVEFMTFN 118 (325)
Q Consensus 42 a~~~~L~~l~~~-d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p-~v~~~~~~ 118 (325)
..++.|.+.+++ .-+.|+..+ +. ....+.+.+.+ .+.=|++- ...|+++.-+|-|.|+. |... .+.|+.+
T Consensus 9 ~~a~~lv~~L~~~GV~~vFg~P--G~--~~~~l~dal~~-~~~i~~i~-~~hE~~Aa~~AdGyAr~tG~pgv~~~TsGp- 81 (556)
T 3hww_A 9 RWAAVILEALTRHGVRHICIAP--GS--RSTLLTLAAAE-NSAFIHHT-HFDERGLGHLALGLAKVSKQPVAVIVTSGT- 81 (556)
T ss_dssp HHHHHHHHHHHTTTCCEEEECC--CT--TSHHHHHHHHH-CTTCEEEE-CSCHHHHHHHHHHHHHHHCSCEEEEECSSH-
T ss_pred HHHHHHHHHHHHCCCCEEEEcC--CC--CcHHHHHHHhh-CCCceEEE-ecCCcHHHHHHHHHHHhhCCCEEEEECCCc-
Confidence 345566655543 455566554 21 11223344433 21126665 47899999999999987 6433 3335433
Q ss_pred HHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchHH--HHHHhcCCCcEEEe--eCC---HHHHHH
Q 020510 119 FSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHCY--AAWYASVPGLKVLS--PYS---SEDARG 189 (325)
Q Consensus 119 f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~~--~a~~~~iP~~~V~~--P~d---~~e~~~ 189 (325)
...-++--|-+ |+. .++|++++..+-.. .+.|. | |.. ..+++.+-....-. |.+ ++++..
T Consensus 82 G~~N~~~gia~--A~~-------d~vPll~itG~~~~~~~g~~~-~-Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~i~~ 150 (556)
T 3hww_A 82 AVANLYPALIE--AGL-------TGEKLILLTADRPPELIDCGA-N-QAIRQPGMFASHPTHSISLPRPTQDIPARWLVS 150 (556)
T ss_dssp HHHTTHHHHHH--HHH-------HCCCEEEEEEECCGGGSSSSC-T-TCCCCTTTTTTCSSEEEECCCCCTTSCHHHHHH
T ss_pred HHHhhhHHHHH--HHH-------hCCCeEEEeCCCCHHHhccCC-C-ccccHHHHHhhheeEEEecCCCcccccHHHHHH
Confidence 33334444433 332 58998887643222 22232 3 322 37888876554443 332 356888
Q ss_pred HHHHhHhC--CCcEEEEeCc
Q 020510 190 LLKAAIRD--PDPVVFLENE 207 (325)
Q Consensus 190 ~l~~a~~~--~~Pv~ir~~~ 207 (325)
+++.|+.. ++||+|-.+.
T Consensus 151 ~i~~A~~~~r~GPV~i~iP~ 170 (556)
T 3hww_A 151 TIDHALGTLHAGGVHINCPF 170 (556)
T ss_dssp HHHHHHHSCCSSCEEEEEEC
T ss_pred HHHHHHhcCCCCCEEEeCCc
Confidence 89998874 5899997664
No 47
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=85.78 E-value=3.6 Score=41.79 Aligned_cols=149 Identities=14% Similarity=0.122 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHhc-CCcEEEEecCCCCccCccccchhHHHHhCCCceeechh--hHHHHHHHHHHHhccC-CeeEEeccc
Q 020510 41 EALNSALDEEMSA-DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMT 116 (325)
Q Consensus 41 ~a~~~~L~~l~~~-d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~ 116 (325)
..+.+.|.+.+.. +++++ ++.|.+... .+. ..+..-..|.+|+..|. +=-..+++|.|+|++. -++++++.
T Consensus 464 ~~v~~~L~~~l~~~~~~~i-v~~~vg~~~-~~~--~~~~~~~~p~~~~~sg~~G~mG~~lpaAiGaalA~p~~~Vv~i~- 538 (677)
T 1t9b_A 464 QTVIKKLSKVANDTGRHVI-VTTGVGQHQ-MWA--AQHWTWRNPHTFITSGGLGTMGYGLPAAIGAQVAKPESLVIDID- 538 (677)
T ss_dssp HHHHHHHHHHHHTTCSCEE-EEECSSHHH-HHH--HHHSCCCSTTCEECCCSSCCTTCHHHHHHHHHHHCTTSEEEEEE-
T ss_pred HHHHHHHHHHhhcCCCCEE-EEeCCchHH-HHH--HHhcccCCCCeEEeCCCcchhhchHHHHHHHHHhCCCCeEEEEE-
Confidence 3455667666654 33444 445654211 110 11112112678888654 1122577888887663 34555454
Q ss_pred ccH-HHHHHHHHHHHHhhccccCCCCccCCEEEE--eCCCCCC----------C--CCCC-cchHHHHHHhcCCCcEEEe
Q 020510 117 FNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFR--GPNGAAA----------G--VGAQ-HSHCYAAWYASVPGLKVLS 180 (325)
Q Consensus 117 ~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G~~~----------g--~G~t-Hs~~~~a~~~~iP~~~V~~ 180 (325)
.+. ++..+..+.+ ++. .++|++++ ..++... . .+.. +.-.+..+...+ |+..+.
T Consensus 539 GDGsf~~~~~eL~t-a~~--------~~l~v~ivV~NN~~~g~~~~~~~~~~~~~~~~~~~~~~d~~~la~a~-G~~~~~ 608 (677)
T 1t9b_A 539 GDASFNMTLTELSS-AVQ--------AGTPVKILILNNEEQGMVTQWQSLFYEHRYSHTHQLNPDFIKLAEAM-GLKGLR 608 (677)
T ss_dssp EHHHHHHHGGGHHH-HHH--------HTCCCEEEEEECSSCHHHHHHHHHHSTTCCCSCCCCCCCHHHHHHHT-TCEEEE
T ss_pred eehHHhccHHHHHH-HHH--------hCCCeEEEEEeCCCchhhhhhhhhhcCCCcccCcCCCCCHHHHHHHc-CCeEEE
Confidence 443 2233444433 333 35665443 3333210 1 1111 112344666666 777788
Q ss_pred eCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 181 PYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 181 P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
..+.+|+...++.+++.++|++|-
T Consensus 609 v~~~~el~~al~~a~~~~gp~lIe 632 (677)
T 1t9b_A 609 VKKQEELDAKLKEFVSTKGPVLLE 632 (677)
T ss_dssp ECSHHHHHHHHHHHHHCSSCEEEE
T ss_pred ECCHHHHHHHHHHHHHCCCcEEEE
Confidence 899999999999999988999884
No 48
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=85.30 E-value=6.1 Score=38.70 Aligned_cols=153 Identities=10% Similarity=0.040 Sum_probs=82.0
Q ss_pred cccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCeeEEe-c
Q 020510 36 QMMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKPVVE-F 114 (325)
Q Consensus 36 ~~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p~v~-~ 114 (325)
.++..+++.+.|.+ .+-+.++..+... ...+.+.+.+ .+.=|++. ...|+++.-+|.|.|+....+++. |
T Consensus 4 ~~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~-~~~i~~i~-~~~E~~A~~~A~Gyar~tg~~v~~~t 74 (552)
T 1ovm_A 4 PYCVADYLLDRLTD---CGADHLFGVPGDY----NLQFLDHVID-SPDICWVG-CANELNASYAADGYARCKGFAALLTT 74 (552)
T ss_dssp CCBHHHHHHHHHHH---TTCCEEEECCCGG----GHHHHHHHHH-CSSCEEEE-CSSHHHHHHHHHHHHHHHSCEEEEEE
T ss_pred ccCHHHHHHHHHHH---cCCCEEEECCChh----HHHHHHHHhc-CCCceEEe-eCcHHHHHHHHHHHHHhhCCcEEEEc
Confidence 35566677666654 4566666654211 1122333433 21125555 599999999999999873344333 4
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--C--C------CCC-CcchHHHHHHhcCCCcEEEeeCC
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--A--G------VGA-QHSHCYAAWYASVPGLKVLSPYS 183 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~--g------~G~-tHs~~~~a~~~~iP~~~V~~P~d 183 (325)
..+ ...-++--+.+ |+. .++|++++..+-.. . + .|. .+ |....+++.+-......+.+
T Consensus 75 sGp-G~~N~~~gv~~--A~~-------~~~Pll~itg~~p~~~~~~~~~~~~~~g~~~~-q~~~~~~~~~tk~~~~v~~~ 143 (552)
T 1ovm_A 75 FGV-GELSAMNGIAG--SYA-------EHVPVLHIVGAPGTAAQQRGELLHHTLGDGEF-RHFYHMSEPITVAQAVLTEQ 143 (552)
T ss_dssp TTH-HHHHTHHHHHH--HHH-------TTCCEEEEEEECCHHHHHHTCCCTTSCSSSCC-SHHHHHTGGGCSEEEECCTT
T ss_pred cCC-cHHHHHHHHHH--Hhh-------hcCCEEEEECCCCHHHHhcccccccccCCCcH-HHHHHHHHhheeEEEEEccc
Confidence 333 33334444433 222 58998887543221 0 1 111 12 33357888887655554430
Q ss_pred --HHHHHHHHHHhHhCCCcEEEEeCcc
Q 020510 184 --SEDARGLLKAAIRDPDPVVFLENEL 208 (325)
Q Consensus 184 --~~e~~~~l~~a~~~~~Pv~ir~~~~ 208 (325)
+..+..+++.|...++||+|-.+..
T Consensus 144 ~~~~~i~~A~~~a~~~~GPV~l~iP~d 170 (552)
T 1ovm_A 144 NACYEIDRVLTTMLRERRPGYLMLPAD 170 (552)
T ss_dssp THHHHHHHHHHHHHHHTCCEEEEEEHH
T ss_pred cHHHHHHHHHHHHHhCCCCEEEEeehh
Confidence 2333444444444469999986654
No 49
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=84.98 E-value=4.6 Score=39.85 Aligned_cols=150 Identities=13% Similarity=0.070 Sum_probs=82.0
Q ss_pred ccHHHHHHHHHHHHHhcCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhcc-CCeeE-Eec
Q 020510 37 MMVREALNSALDEEMSADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYY-GLKPV-VEF 114 (325)
Q Consensus 37 ~s~~~a~~~~L~~l~~~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~-G~~p~-v~~ 114 (325)
++..+++.+.|.+ .+-+.++..+... ...+.+.+.+ .+.=|++. ...|+++..+|.|.|+. | ..+ +.|
T Consensus 25 ~~~a~~l~~~L~~---~GV~~vfg~PG~~----~~~l~~al~~-~~~i~~i~-~~~E~~A~~~A~GyAr~tG-~~v~~~t 94 (570)
T 2vbf_A 25 YTVGDYLLDRLHE---LGIEEIFGVPGDY----NLQFLDQIIS-REDMKWIG-NANELNASYMADGYARTKK-AAAFLTT 94 (570)
T ss_dssp CBHHHHHHHHHHH---TTCCEEEECCCGG----GHHHHHHHHH-CSSCEEEE-CSSHHHHHHHHHHHHHHHS-CEEEEEE
T ss_pred CCHHHHHHHHHHH---cCCCEEEECCCcc----hHHHHHHHhc-CCCCeEEC-cCcHHHHHHHHHHHHHHhC-CeEEEEc
Confidence 5667777766654 4556666654211 1122233433 21125665 49999999999999965 7 433 334
Q ss_pred ccccHHHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCC-CCcc-------hHHHHHHhcCCCcEEEeeCCH
Q 020510 115 MTFNFSMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVG-AQHS-------HCYAAWYASVPGLKVLSPYSS 184 (325)
Q Consensus 115 ~~~~f~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G-~tHs-------~~~~a~~~~iP~~~V~~P~d~ 184 (325)
..+ ...-++--|.+ |+. .++|++++..+-.. .+.+ ..|+ +....+++.+.-.....+ +
T Consensus 95 sGp-G~~N~~~gi~~--A~~-------~~vPlv~itg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tk~~~~v~-~- 162 (570)
T 2vbf_A 95 FGV-GELSAINGLAG--SYA-------ENLPVVEIVGSPTSKVQNDGKFVHHTLADGDFKHFMKMHEPVTAARTLLT-A- 162 (570)
T ss_dssp TTH-HHHHHHHHHHH--HHH-------TTCCEEEEEEECCHHHHHHTCCCTTSCSSSCCCHHHHHTGGGCSEEEECC-T-
T ss_pred CCC-CHHHHHHHHHH--Hhh-------hCCCEEEEeCCCCHHHhhccccceeeccccchHHHHHHhhhhEEEEEEEC-c-
Confidence 333 33334555543 232 57998887543221 1111 1121 123478888875544443 4
Q ss_pred HHHHHHHHHhHh----CCCcEEEEeCcc
Q 020510 185 EDARGLLKAAIR----DPDPVVFLENEL 208 (325)
Q Consensus 185 ~e~~~~l~~a~~----~~~Pv~ir~~~~ 208 (325)
+++...++.+++ .++||+|-.+..
T Consensus 163 ~~~~~~l~~A~~~A~~~~GPV~l~iP~d 190 (570)
T 2vbf_A 163 ENATYEIDRVLSQLLKERKPVYINLPVD 190 (570)
T ss_dssp TTHHHHHHHHHHHHHHHCCCEEEEEEHH
T ss_pred ccHHHHHHHHHHHHhhCCCCEEEEcchh
Confidence 555555555544 469999986654
No 50
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=82.30 E-value=7.6 Score=38.62 Aligned_cols=148 Identities=13% Similarity=0.018 Sum_probs=77.2
Q ss_pred HHHHHHHHHh-cCCcEEEEecCCCCccCccccchhHHHHhCCCceeechhhHHHHHHHHHHHhccCCee--EEecccccH
Q 020510 43 LNSALDEEMS-ADPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPITEAGFTGIGVGAAYYGLKP--VVEFMTFNF 119 (325)
Q Consensus 43 ~~~~L~~l~~-~d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GIaE~~~vg~A~GlA~~G~~p--~v~~~~~~f 119 (325)
.++.|.+.++ .+-+.|+..+-.. ...+.+.+.+ .+.=|++.+ ..|+++.-+|.|.|+..-+| .+.|+.+ .
T Consensus 33 ~a~~lv~~L~~~GV~~vFg~PG~~----~~~l~dal~~-~~~i~~i~~-~hE~~Aa~aA~GyAr~tgkpgv~~~TsGp-G 105 (604)
T 2x7j_A 33 YIGSFIDEFALSGITDAVVCPGSR----STPLAVLCAA-HPDISVHVQ-IDERSAGFFALGLAKAKQRPVLLICTSGT-A 105 (604)
T ss_dssp HHHHHHHHHHHHTCCEEEECCCST----THHHHHHHHH-CTTCEEEEC-SSHHHHHHHHHHHHHHHTSCEEEEECSSH-H
T ss_pred HHHHHHHHHHHcCCCEEEECcCcc----cHHHHHHHHh-CCCceEEEe-cChHHHHHHHHHHHHhhCCCEEEEECChh-H
Confidence 4444444443 3566666654211 1223344433 211367775 99999999999999874343 3345433 3
Q ss_pred HHHHHHHHHHHHhhccccCCCCccCCEEEEeCCCCC--CCCCCCcchH-H-HHHHhcCCCcEEE--eeCC--------HH
Q 020510 120 SMQAIDHIINSAAKSNYMSSGQISVPIVFRGPNGAA--AGVGAQHSHC-Y-AAWYASVPGLKVL--SPYS--------SE 185 (325)
Q Consensus 120 ~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~~~G~~--~g~G~tHs~~-~-~a~~~~iP~~~V~--~P~d--------~~ 185 (325)
..-++--|.+ |+. .++|++++..+-.. .+.|. + |. + ..+++.+-..... .|.+ +.
T Consensus 106 ~~N~~~gia~--A~~-------~~vPlv~ItG~~~~~~~g~~~-~-Q~~d~~~~~~~~tk~~~~v~~~~~~~~~~~~~~~ 174 (604)
T 2x7j_A 106 AANFYPAVVE--AHY-------SRVPIIVLTADRPHELREVGA-P-QAINQHFLFGNFVKFFTDSALPEESPQMLRYIRT 174 (604)
T ss_dssp HHTTHHHHHH--HHH-------HTCCEEEEEEECCGGGSSSCC-T-TCCCCTTTTGGGSSCEEECCCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHH--Hhh-------cCCCEEEEeCCCCHHHhCCCC-C-CcCcHHHHhhhheeeeeecCCCcccchhHHHHHH
Confidence 3333444433 222 57998887643222 12222 2 22 2 3677777544333 3443 22
Q ss_pred HHHHHHHHhHh-CCCcEEEEeCcc
Q 020510 186 DARGLLKAAIR-DPDPVVFLENEL 208 (325)
Q Consensus 186 e~~~~l~~a~~-~~~Pv~ir~~~~ 208 (325)
.+.++++.|.. .++||+|..+..
T Consensus 175 ~i~~A~~~A~~~~~GPV~l~iP~d 198 (604)
T 2x7j_A 175 LASRAAGEAQKRPMGPVHVNVPLR 198 (604)
T ss_dssp HHHHHHHHHHSSSCCEEEEEEECC
T ss_pred HHHHHHHHhhCCCCCcEEEEcccC
Confidence 33344444443 468999986644
No 51
>2lqo_A Putative glutaredoxin RV3198.1/MT3292; TRX fold, oxidoreductase; NMR {Mycobacterium tuberculosis}
Probab=77.09 E-value=1.6 Score=32.56 Aligned_cols=73 Identities=16% Similarity=0.183 Sum_probs=48.4
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-----CCeEEEEecCCCCCCHH-HHHHHHH
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-----TNRLVTVEEGFPQHGVG-AEIWCAF 313 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-----~~~vvvvEe~~~~GGlg-~~v~~~l 313 (325)
+|+|.+. +....+.+|.+.|++.||+.+.+|+.. |.+...+..+. +-.+|++.|+....|+. .+|.+.|
T Consensus 5 ~I~vYs~-~~Cp~C~~aK~~L~~~gi~y~~idi~~----d~~~~~~~~~~~~G~~tVP~I~i~Dg~~l~~~~~~el~~~L 79 (92)
T 2lqo_A 5 ALTIYTT-SWCGYCLRLKTALTANRIAYDEVDIEH----NRAAAEFVGSVNGGNRTVPTVKFADGSTLTNPSADEVKAKL 79 (92)
T ss_dssp CEEEEEC-TTCSSHHHHHHHHHHTTCCCEEEETTT----CHHHHHHHHHHSSSSSCSCEEEETTSCEEESCCHHHHHHHH
T ss_pred cEEEEcC-CCCHhHHHHHHHHHhcCCceEEEEcCC----CHHHHHHHHHHcCCCCEeCEEEEeCCEEEeCCCHHHHHHHH
Confidence 4666654 555678888899999999999999864 55544433332 22467787766556653 5777777
Q ss_pred cCCC
Q 020510 314 FPPA 317 (325)
Q Consensus 314 ~~~~ 317 (325)
.+.+
T Consensus 80 ~el~ 83 (92)
T 2lqo_A 80 VKIA 83 (92)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 52
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=73.58 E-value=11 Score=35.00 Aligned_cols=82 Identities=5% Similarity=-0.062 Sum_probs=52.4
Q ss_pred EEEEEec-hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHH-----HHHHHHhCC-CeEEEEecCCCCCCHHHHHHHHH
Q 020510 241 VTITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRS-----TINASVRKT-NRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 241 v~Iia~G-~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~-----~l~~~~~~~-~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
=+|+++| +...+...|++.+.+.|-++.++.+.+-+|-+.+ .|..+-+.+ +..|-.=||..-++....+++..
T Consensus 137 PviLstGmstl~Ei~~Ave~i~~~g~~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~lpVG~SdHt~g~~~~~~~AAvA 216 (350)
T 3g8r_A 137 PVVASTAGARREDIDKVVSFMLHRGKDLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGVRIGYSTHEDPDLMEPIMLAVA 216 (350)
T ss_dssp CEEEECTTCCHHHHHHHHHHHHTTTCCEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTSEEEEEECCCSSCCHHHHHHHH
T ss_pred cEEEECCCCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCcccCCHHHHHHHHHHCCCCCEEcCCCCCCCccHHHHHHHH
Confidence 4567888 6678999999999988888888888887885544 454444456 55567788875223322334333
Q ss_pred cCCCccccC
Q 020510 314 FPPAWLISS 322 (325)
Q Consensus 314 ~~~~~~~~~ 322 (325)
.-..++-+|
T Consensus 217 lGA~vIEkH 225 (350)
T 3g8r_A 217 QGATVFEKH 225 (350)
T ss_dssp TTCCEEEEE
T ss_pred cCCCEEEEe
Confidence 222344444
No 53
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=72.71 E-value=18 Score=31.23 Aligned_cols=60 Identities=12% Similarity=0.055 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 251 GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 251 ~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
..+.++++.|++.|.+++++|+.. .+|.+...+.++..+.||+.---+ .+++-..+..++
T Consensus 47 ~L~~~~~~~l~~~g~ev~~~dL~~--~~Dv~~~~~~l~~aD~iv~~~P~y-~~~~p~~lK~~i 106 (218)
T 3rpe_A 47 TLTNVAADFLRESGHQVKITTVDQ--GYDIESEIENYLWADTIIYQMPAW-WMGEPWILKKYI 106 (218)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEGGG--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEEECCC--ccCHHHHHHHHHhCCEEEEECChH-hccCCHHHHHHH
Confidence 445566777888899999999985 789888888888888877665544 567766665444
No 54
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=70.80 E-value=13 Score=36.45 Aligned_cols=111 Identities=14% Similarity=0.152 Sum_probs=62.5
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEE--eCCCCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFR--GPNGAAA 156 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G~~~ 156 (325)
|.+|+..+- +=-..+++|.|++++. -+++++.. .+. ++..+..+-+ ++. .++|++++ ..++...
T Consensus 396 ~~~~~~~~~~g~mG~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~t-a~~--------~~l~~~ivv~nN~~~g~ 465 (549)
T 3eya_A 396 KRRLLGSFNHGSMANAMPQALGAQATEPERQVVAMC-GDGGFSMLMGDFLS-VVQ--------MKLPVKIVVFNNSVLGF 465 (549)
T ss_dssp SCEEECCTTTCCTTCHHHHHHHHHHHSTTSCEEEEE-EHHHHHHTGGGHHH-HHH--------TTCCCEEEEEECSBCCC
T ss_pred CCcEEeCCCCchhhhHHHHHHHHHHhCCCCcEEEEE-ccchhhccHHHHHH-HHH--------hCCCeEEEEEeCCccHH
Confidence 567775211 1113577888888764 45666554 443 2223344432 333 35665443 3322211
Q ss_pred --C-C--------CCC-cchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 --G-V--------GAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 --g-~--------G~t-Hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
. . +.+ +.-.+..+.+.. |+..+...+++|+...++.+++.++|++|-
T Consensus 466 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 524 (549)
T 3eya_A 466 VAMEMKAGGYLTDGTELHDTNFARIAEAC-GITGIRVEKASEVDEALQRAFSIDGPVLVD 524 (549)
T ss_dssp C------------CCBCCCCCHHHHHHHT-TSEEEEECSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHhcCCCCcCCcCCCCCHHHHHHHc-CCcEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 0 111 111334555555 677778899999999999999999999984
No 55
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=70.23 E-value=9.2 Score=31.91 Aligned_cols=67 Identities=12% Similarity=0.077 Sum_probs=45.4
Q ss_pred chhHHHHHHHHHH-HHhcCCcEEEEEeeeccC--------C--CHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHc
Q 020510 247 SKIVGLSLKAAEI-LAKEGISAEVINLRSIRP--------L--DRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 247 G~~~~~a~~Aa~~-L~~~Gi~~~Vi~~~~l~P--------~--d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
|.....+..+++. |+++|.+++++|+..+.. . +.+.+.+.+..++.||+.=--+ .|++...+..++-
T Consensus 16 g~t~~la~~i~~~~l~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~i~~aD~ii~~sP~y-~~~~p~~lK~~ld 93 (197)
T 2vzf_A 16 STTAKLAEYALAHVLARSDSQGRHIHVIDLDPKALLRGDLSNAKLKEAVDATCNADGLIVATPIY-KASYTGLLKAFLD 93 (197)
T ss_dssp CHHHHHHHHHHHHHHHHSSEEEEEEEGGGSCHHHHHHTCTTSHHHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEEccccCchhhcccccCcHHHHHHHHHHHHCCEEEEEeCcc-CCCCCHHHHHHHH
Confidence 4455666677788 888899999999876521 1 2344556677777766665544 5788888777764
No 56
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=69.39 E-value=12 Score=37.31 Aligned_cols=111 Identities=11% Similarity=0.105 Sum_probs=63.9
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe-CC-CCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG-PN-GAAA 156 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~-~~-G~~~ 156 (325)
|.+|+..+. +=-..+++|.|+++.. -++++++. .+. ++..+..+- .++. .++|++++. .+ +...
T Consensus 410 ~~~~~~~~~~g~~G~~l~~A~Gaala~~~~~vv~~~-GDG~~~~~~~~l~-~a~~--------~~lp~~~vv~nN~~~~~ 479 (603)
T 4feg_A 410 SNRHITSNLFATMGVGIPGAIAAKLNYPERQVFNLA-GDGGASMTMQDLA-TQVQ--------YHLPVINVVFTNCQYGF 479 (603)
T ss_dssp TCEEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHH-HHHH--------TTCCCEEEEEECSBCHH
T ss_pred CCceecCcccccccchhHHHhhHHHhCCCCcEEEEe-ccHHHhhhHHHHH-HHHH--------HCcCeEEEEEECCchHH
Confidence 567776432 1123667788888775 35566554 443 333444443 2333 467765543 22 2221
Q ss_pred ------------CCCCC-cchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhH--hCCCcEEEE
Q 020510 157 ------------GVGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAI--RDPDPVVFL 204 (325)
Q Consensus 157 ------------g~G~t-Hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~--~~~~Pv~ir 204 (325)
..+.. +...+..+.... |+..+.+.+..|+...++.+. +.++|++|-
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~~~gP~lIe 541 (603)
T 4feg_A 480 IKDEQEDTNQNDFIGVEFNDIDFSKIADGV-HMQAFRVNKIEQLPDVFEQAKAIAQHEPVLID 541 (603)
T ss_dssp HHHHHHHHCSSCCCSSBCCCCCHHHHHHHT-TCEEEEECBGGGHHHHHHHHHHHTTTSCEEEE
T ss_pred HHHHHHHhcCCCcccCcCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHHhcCCCcEEEE
Confidence 11111 212334555554 667777889999999999999 788999984
No 57
>3zyw_A Glutaredoxin-3; metal binding protein; 1.84A {Homo sapiens}
Probab=68.85 E-value=7.1 Score=29.71 Aligned_cols=65 Identities=20% Similarity=0.174 Sum_probs=43.7
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHH---HHHHHh-CCCeEEEEecCCCCCCHHH
Q 020510 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRST---INASVR-KTNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 238 G~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~---l~~~~~-~~~~vvvvEe~~~~GGlg~ 307 (325)
..+|+|++-| +....+.+|.+.|++.|++.+.+|+.. |.+. |.+... .+-..|+++.. ..||+-.
T Consensus 15 ~~~Vvlf~kg~~~~~~Cp~C~~ak~~L~~~gi~y~~~di~~----d~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~ 87 (111)
T 3zyw_A 15 AAPCMLFMKGTPQEPRCGFSKQMVEILHKHNIQFSSFDIFS----DEEVRQGLKAYSSWPTYPQLYVSGE-LIGGLDI 87 (111)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGG----CHHHHHHHHHHHTCCSSCEEEETTE-EEECHHH
T ss_pred cCCEEEEEecCCCCCcchhHHHHHHHHHHcCCCeEEEECcC----CHHHHHHHHHHHCCCCCCEEEECCE-EEecHHH
Confidence 4578888876 566788999999999999999999875 3333 322221 22235666554 4688743
No 58
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=68.24 E-value=15 Score=32.28 Aligned_cols=73 Identities=15% Similarity=0.025 Sum_probs=49.0
Q ss_pred cEEEEEec-----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCC---------HHHHHHHHhCCCeEEEEecCCCCCCH
Q 020510 240 DVTITAFS-----KIVGLSLKAAEILAKEGISAEVINLRSIRPLD---------RSTINASVRKTNRLVTVEEGFPQHGV 305 (325)
Q Consensus 240 dv~Iia~G-----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d---------~~~l~~~~~~~~~vvvvEe~~~~GGl 305 (325)
++++|... .....+..+++.+++.|++++++|+..+ |+. .+.+.+.+...+.||+.---+ .+++
T Consensus 36 kIliI~GS~r~~s~t~~La~~~~~~l~~~g~eve~idL~~~-pl~~~d~~~~d~~~~l~~~i~~AD~iI~~sP~Y-n~si 113 (247)
T 2q62_A 36 RILILYGSLRTVSYSRLLAEEARRLLEFFGAEVKVFDPSGL-PLPDAAPVSHPKVQELRELSIWSEGQVWVSPER-HGAM 113 (247)
T ss_dssp EEEEEECCCCSSCHHHHHHHHHHHHHHHTTCEEEECCCTTC-CCTTSSCTTSHHHHHHHHHHHHCSEEEEEEECS-SSSC
T ss_pred eEEEEEccCCCCCHHHHHHHHHHHHHhhCCCEEEEEEhhcC-CCCcCCCCCCHHHHHHHHHHHHCCEEEEEeCCC-CCCc
Confidence 56555422 2335556677778878999999999875 322 455667777887776665544 5888
Q ss_pred HHHHHHHHc
Q 020510 306 GAEIWCAFF 314 (325)
Q Consensus 306 g~~v~~~l~ 314 (325)
...+..+|-
T Consensus 114 pa~LKn~iD 122 (247)
T 2q62_A 114 TGIMKAQID 122 (247)
T ss_dssp CHHHHHHHH
T ss_pred cHHHHHHHH
Confidence 888776663
No 59
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=67.97 E-value=13 Score=36.61 Aligned_cols=111 Identities=18% Similarity=0.137 Sum_probs=63.7
Q ss_pred CCceeechhh--HHHHHHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCCC
Q 020510 83 PERVLDTPIT--EAGFTGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAAG 157 (325)
Q Consensus 83 p~R~i~~GIa--E~~~vg~A~GlA~~G~~p~v~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~g 157 (325)
|.++++.|.. =-..+++|.|+|++.-++++++. .+.. +..+..+-. +.. .++|++++. .+|....
T Consensus 416 p~~~~~~g~~g~~G~~l~~AiGaala~~~~vv~i~-GDGsf~~~~~el~t-a~~--------~~l~~~ivv~NN~~~~~~ 485 (568)
T 2c31_A 416 PRKRLDSGTWGVMGIGMGYCVAAAAVTGKPVIAVE-GDSAFGFSGMELET-ICR--------YNLPVTVIIMNNGGIYKG 485 (568)
T ss_dssp TTCEEESTTTTCSSCHHHHHHHHHHHHCSCEEEEE-EHHHHHTTGGGHHH-HHH--------TTCCEEEEEEESSBSSCS
T ss_pred CCeEEcCCCCccccccHHHHHHHHhCCCCcEEEEE-cchHhhccHHHHHH-HHH--------hCCCeEEEEEeCchhHHH
Confidence 6777765431 12346777777776445555554 4432 222333322 332 467755543 3342111
Q ss_pred CCC-----------CcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 158 VGA-----------QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 158 ~G~-----------tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
... .+.-.+..+...+ |+..+...+.+|+...++.+++.++|++|-
T Consensus 486 ~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 542 (568)
T 2c31_A 486 NEADPQPGVISCTRLTRGRYDMMMEAF-GGKGYVANTPAELKAALEEAVASGKPCLIN 542 (568)
T ss_dssp CCCCSBTTBCCTTBCCCCCHHHHHHTT-TCEEEEESSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHhhcCCcccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 110 1212334556655 778888899999999999999888999884
No 60
>3ipz_A Monothiol glutaredoxin-S14, chloroplastic; electron transport, PL redox-active center, transit peptide, transport, oxidoreduc; 2.40A {Arabidopsis thaliana} PDB: 2lku_A
Probab=67.47 E-value=4.6 Score=30.57 Aligned_cols=70 Identities=14% Similarity=0.134 Sum_probs=45.4
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHh-CCCeEEEEecCCCCCCHHHHH
Q 020510 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-KTNRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 238 G~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~-~~~~vvvvEe~~~~GGlg~~v 309 (325)
..+++|++.+ .....+.+|.+.|++.|++.+.+|+..- |--.+.|.+... .+-..++++.. ..||+-...
T Consensus 17 ~~~Vvvy~k~t~~~p~Cp~C~~ak~~L~~~gi~~~~~dI~~~-~~~~~~l~~~~g~~tvP~ifi~g~-~iGG~d~l~ 91 (109)
T 3ipz_A 17 SEKVVLFMKGTRDFPMCGFSNTVVQILKNLNVPFEDVNILEN-EMLRQGLKEYSNWPTFPQLYIGGE-FFGGCDITL 91 (109)
T ss_dssp SSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCEEEEGGGC-HHHHHHHHHHHTCSSSCEEEETTE-EEECHHHHH
T ss_pred cCCEEEEEecCCCCCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHHCCCCCCeEEECCE-EEeCHHHHH
Confidence 4579999888 3788899999999999999999998642 111122333222 12235666554 468875443
No 61
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=67.47 E-value=13 Score=32.03 Aligned_cols=67 Identities=9% Similarity=0.091 Sum_probs=45.5
Q ss_pred chhHHHHHHHHHHHHhc-CCcEEEEEeeeccC---------------------CCHHHHHHHHhCCCeEEEEecCCCCCC
Q 020510 247 SKIVGLSLKAAEILAKE-GISAEVINLRSIRP---------------------LDRSTINASVRKTNRLVTVEEGFPQHG 304 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~-Gi~~~Vi~~~~l~P---------------------~d~~~l~~~~~~~~~vvvvEe~~~~GG 304 (325)
|.+...+..+++.|++. |.+++++|+..+.+ -|.+.+.+.+..++.||+.=--+ .++
T Consensus 15 s~T~~la~~i~~~l~~~~g~~v~~~dl~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~l~~AD~iI~~sP~y-~~~ 93 (242)
T 1sqs_A 15 SKTLEYTKRLSSIISSRNNVDISFRTPFNSELEISNSDSEELFKKGIDRQSNADDGGVIKKELLESDIIIISSPVY-LQN 93 (242)
T ss_dssp CHHHHHHHHHHHHHHHHSCCEEEEECTTTCCCCCCCCCHHHHHHHCCCSSTTTSTHHHHHHHHHHCSEEEEEEEEC-SSS
T ss_pred ChHHHHHHHHHHHHHHhcCCeEEEEEcccCCCCCCCchHHhhccCCCCccchHHHHHHHHHHHHHCCEEEEEcccc-ccC
Confidence 44556666778888887 99999999876421 23455666677787766655544 578
Q ss_pred HHHHHHHHHc
Q 020510 305 VGAEIWCAFF 314 (325)
Q Consensus 305 lg~~v~~~l~ 314 (325)
+...+..++-
T Consensus 94 ~p~~lK~~iD 103 (242)
T 1sqs_A 94 VSVDTKNFIE 103 (242)
T ss_dssp CCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 8777776653
No 62
>3m49_A Transketolase; alpha-beta-alpha sandwich, csgid, transferase, structural genomics, center for structural genomics of infectious diseases; HET: MSE TDP PG5 TRS BTB; 2.00A {Bacillus anthracis} PDB: 3hyl_A*
Probab=67.36 E-value=22 Score=36.17 Aligned_cols=84 Identities=15% Similarity=0.088 Sum_probs=50.9
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeC-CCCCCCCCCCc---chHHHHHHhcCCCcEEEee
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVLSP 181 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---s~~~~a~~~~iP~~~V~~P 181 (325)
.++++. .+. ++ -+++.+.. ++. .++| ++++.. ++.. -.+.++ ...+...+++. |+.++.+
T Consensus 174 ~v~~i~-GDG~l~eG~~~Eal~~-A~~--------~~L~~livI~dnN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~v 241 (690)
T 3m49_A 174 YTYAIC-GDGDLMEGVSAEASSL-AAH--------LQLGRLVVLYDSNDIS-LDGDLNRSFSESVEDRYKAY-GWQVIRV 241 (690)
T ss_dssp CEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSBC-SSSBGGGTCCCCHHHHHHHH-TCEEEEE
T ss_pred eEEEEE-CchhhhhccHHHHHHH-HHH--------hCCCeEEEEEECCCee-cccchhhccchhHHHHHHHc-CCcEEEE
Confidence 344454 554 33 45666643 453 4665 444433 3332 123332 12334677766 8899988
Q ss_pred ---CCHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 182 ---YSSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 182 ---~d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
.|..++..+++.+.+ .++|++|..
T Consensus 242 ~DG~d~~~l~~Al~~a~~~~~~P~lI~v 269 (690)
T 3m49_A 242 EDGNDIEAIAKAIEEAKADEKRPTLIEV 269 (690)
T ss_dssp SCTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred ecCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 688999999999988 688999864
No 63
>3uk1_A Transketolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, thiamine pyrophosphate; 2.15A {Burkholderia thailandensis} PDB: 3upt_A*
Probab=66.54 E-value=15 Score=37.61 Aligned_cols=85 Identities=12% Similarity=0.090 Sum_probs=50.6
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeCC-CCCCCCCCCc---chHHHHHHhcCCCcEEEe
Q 020510 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGPN-GAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (325)
Q Consensus 109 ~p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~~-G~~~g~G~tH---s~~~~a~~~~iP~~~V~~ 180 (325)
+.++++. .+. ++ -.++.+.. ++. .++| ++++..+ +.. -.+.++ ...+...+++. |+.++.
T Consensus 188 ~~vv~i~-GDG~l~eG~~~Eal~~-A~~--------~~L~~livI~dnN~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~ 255 (711)
T 3uk1_A 188 HHTYVFL-GDGCLMEGISHEACSL-AGT--------LKLNKLIALYDDNGIS-IDGDVVNWFHDDTPKRFEAY-GWNVIP 255 (711)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEE-TTEEGGGTCCCCHHHHHHHT-TCEEEE
T ss_pred CeEEEEE-CCcchhhccHHHHHHH-HHH--------hCCCcEEEEEECCCcc-cccchhhhcCCCHHHHHHHc-CCcEEE
Confidence 3455454 554 33 46666643 553 4676 5554432 322 122222 12345677776 777776
Q ss_pred e---CCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 181 P---YSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 181 P---~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
| .|..++...++.+.+.++|++|..
T Consensus 256 ~vdG~d~~~l~~Al~~A~~~~~P~lI~v 283 (711)
T 3uk1_A 256 NVNGHDVDAIDAAIAKAKRSDKPSLICC 283 (711)
T ss_dssp EEETTCHHHHHHHHHHHTTCSSCEEEEE
T ss_pred EeCCCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 5 588999999999888789999864
No 64
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=66.49 E-value=13 Score=30.07 Aligned_cols=49 Identities=18% Similarity=0.274 Sum_probs=31.4
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEE
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTV 296 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvv 296 (325)
+|.+-..|...++.|++.|++++++|+... .|.+.+...+.+++.||+.
T Consensus 15 ~GnT~~iA~~ia~~l~~~g~~v~~~~~~~~--~~~~~~~~~~~~~d~ii~G 63 (159)
T 3fni_A 15 YGYSDRLAQAIINGITKTGVGVDVVDLGAA--VDLQELRELVGRCTGLVIG 63 (159)
T ss_dssp STTHHHHHHHHHHHHHHTTCEEEEEESSSC--CCHHHHHHHHHTEEEEEEE
T ss_pred ChHHHHHHHHHHHHHHHCCCeEEEEECcCc--CCHHHHHHHHHhCCEEEEE
Confidence 345556666677777778999998887643 1455555556566655544
No 65
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=66.17 E-value=14 Score=36.32 Aligned_cols=111 Identities=20% Similarity=0.122 Sum_probs=63.9
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (325)
|.+|+..+- +=-..+++|.|+|++. -++++++. .+. ++..+..+.. +.. .++|++++. .++...
T Consensus 410 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~t-a~~--------~~l~~~ivv~nN~~~~~ 479 (566)
T 1ozh_A 410 ARQVMISNGQQTMGVALPWAIGAWLVNPERKVVSVS-GDGGFLQSSMELET-AVR--------LKANVLHLIWVDNGYNM 479 (566)
T ss_dssp CSEEECCCTTCCTTCHHHHHHHHHHHSTTSEEEEEE-EHHHHHHHTTHHHH-HHH--------HTCCEEEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCCEEEEE-cChHHhccHHHHHH-HHH--------hCCCcEEEEEECCchhH
Confidence 677876321 1123566777877653 35555554 443 2334444432 333 367755543 222210
Q ss_pred -----------CCCC-CcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 -----------GVGA-QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 -----------g~G~-tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
..+. .+.-.+..+.... |+..+...+.+|+...++.+++.++|++|-
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 538 (566)
T 1ozh_A 480 VAIQEEKKYQRLSGVEFGPMDFKAYAESF-GAKGFAVESAEALEPTLRAAMDVDGPAVVA 538 (566)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHTT-TSEEEECCSGGGHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHhcCCCccCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0111 1212334666666 778888899999999999999888999884
No 66
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=66.14 E-value=20 Score=33.37 Aligned_cols=81 Identities=12% Similarity=0.102 Sum_probs=53.3
Q ss_pred cEEEEEec-hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCH-----HHHHHHHhCC-CeEEEEecCCCCCCHHHHHHHH
Q 020510 240 DVTITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDR-----STINASVRKT-NRLVTVEEGFPQHGVGAEIWCA 312 (325)
Q Consensus 240 dv~Iia~G-~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~-----~~l~~~~~~~-~~vvvvEe~~~~GGlg~~v~~~ 312 (325)
+=+|+++| +...+...|++.+.+.|.++-+..+.+-+|-+. ..|..+-+.+ +..|.+-+|.. |..-.+++.
T Consensus 149 kPviLstGmat~~Ei~~Ave~i~~~G~~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~lpVg~sdHt~--G~~~~~AAv 226 (349)
T 2wqp_A 149 KPIILSTGMNSIESIKKSVEIIREAGVPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTL--DNYACLGAV 226 (349)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHHHTCCEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTSEEEEECCSS--SSHHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeccCCCCCChhhcCHHHHHHHHHHCCCCCEEeCCCCC--cHHHHHHHH
Confidence 34677888 557899999999998888888887777777543 4455444456 55567778873 455555554
Q ss_pred HcCCCccccC
Q 020510 313 FFPPAWLISS 322 (325)
Q Consensus 313 l~~~~~~~~~ 322 (325)
..--.++-+|
T Consensus 227 AlGA~iIEkH 236 (349)
T 2wqp_A 227 ALGGSILERH 236 (349)
T ss_dssp HHTCCEEEEE
T ss_pred HhCCCEEEeC
Confidence 4333354444
No 67
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=66.11 E-value=8.4 Score=38.14 Aligned_cols=111 Identities=13% Similarity=0.093 Sum_probs=64.3
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (325)
|.+|++.|- +=-..+++|.|+|++. -++++++. .+. ++..+..+-+ ++. .++|++++. .++...
T Consensus 416 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~t-a~~--------~~l~~~ivv~NN~~~~~ 485 (590)
T 1ybh_A 416 PRQWLSSGGLGAMGFGLPAAIGASVANPDAIVVDID-GDGSFIMNVQELAT-IRV--------ENLPVKVLLLNNQHLGM 485 (590)
T ss_dssp TTSEECCCSSCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHTTTHHHH-HHH--------TTCCEEEEEEECSBCHH
T ss_pred CCeEEeCCCcccccchHHHHHHHHHhCCCCcEEEEE-ccchhhccHHHHHH-HHH--------hCCCcEEEEEECCcchH
Confidence 678888753 2223677888888763 35666554 443 2333444432 333 467755443 223210
Q ss_pred ---------C-------CCCCc-----chHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 ---------G-------VGAQH-----SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 ---------g-------~G~tH-----s~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
+ .+..| .-.+..+.+.+ |+..+...+.+|+...++.+++.++|++|-
T Consensus 486 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 553 (590)
T 1ybh_A 486 VMQWEDRFYKANRAHTFLGDPAQEDEIFPNMLLFAAAC-GIPAARVTKKADLREAIQTMLDTPGPYLLD 553 (590)
T ss_dssp HHHHHHHHSTTCCCSCBCSCGGGTTSCSSCHHHHHHHT-TCCEEEECBHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 01100 11334555555 555667789999999999999988999884
No 68
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=65.93 E-value=14 Score=30.32 Aligned_cols=69 Identities=7% Similarity=-0.003 Sum_probs=44.5
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCH------------HHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDR------------STINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~------------~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
+|.+-..|..+++.|++.|++++++++....+-.. +.+.+.+..++.||+.=--+ .|++...+..++
T Consensus 16 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk~~l 94 (200)
T 2a5l_A 16 HGATAEMARQIARGVEQGGFEARVRTVPAVSTECEAVAPDIPAEGALYATLEDLKNCAGLALGSPTR-FGNMASPLKYFL 94 (200)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEBCCCEEC-------------CCBCCHHHHHTCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred CChHHHHHHHHHHHHhhCCCEEEEEEhhhccchhhhhccccccccCchhhHHHHHHCCEEEEEcChh-ccCccHHHHHHH
Confidence 45666677777888888899999999987521110 01134466777766665544 578877777776
Q ss_pred cC
Q 020510 314 FP 315 (325)
Q Consensus 314 ~~ 315 (325)
-.
T Consensus 95 d~ 96 (200)
T 2a5l_A 95 DG 96 (200)
T ss_dssp HT
T ss_pred HH
Confidence 43
No 69
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=64.50 E-value=22 Score=33.52 Aligned_cols=82 Identities=10% Similarity=0.018 Sum_probs=54.4
Q ss_pred cEEEEEec-hhHHHHHHHHHHHHhcCC-cEEEEEeeeccCCCHH-----HHHHHHhCC-CeEEEEecCCCCCCHHHHHHH
Q 020510 240 DVTITAFS-KIVGLSLKAAEILAKEGI-SAEVINLRSIRPLDRS-----TINASVRKT-NRLVTVEEGFPQHGVGAEIWC 311 (325)
Q Consensus 240 dv~Iia~G-~~~~~a~~Aa~~L~~~Gi-~~~Vi~~~~l~P~d~~-----~l~~~~~~~-~~vvvvEe~~~~GGlg~~v~~ 311 (325)
+=+|+++| +...+...|++.+.+.|. ++.+..+.+-+|-+.+ .|..+-+.+ +..|.+-+|.. |-..-.+++
T Consensus 159 KPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~nL~aI~~Lk~~f~~lpVG~SdHt~-G~~~~~~AA 237 (385)
T 1vli_A 159 RPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYSNLSVIPMLAAAFPEAVIGFSDHSE-HPTEAPCAA 237 (385)
T ss_dssp SCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGCCTTHHHHHHHHSTTSEEEEEECCS-SSSHHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhcCHHHHHHHHHHcCCCCEEeCCCCC-CchHHHHHH
Confidence 34678888 557899999999998886 8988888888876443 455433455 55567788873 315555555
Q ss_pred HHcCCCccccC
Q 020510 312 AFFPPAWLISS 322 (325)
Q Consensus 312 ~l~~~~~~~~~ 322 (325)
...--.++-+|
T Consensus 238 vAlGA~iIEkH 248 (385)
T 1vli_A 238 VRLGAKLIEKH 248 (385)
T ss_dssp HHTTCSEEEEE
T ss_pred HHcCCCEEEeC
Confidence 54333344444
No 70
>2o1s_A 1-deoxy-D-xylulose-5-phosphate synthase; DXS, thiamine, isoprenoid, transferase; HET: TDP; 2.40A {Escherichia coli}
Probab=64.03 E-value=24 Score=35.23 Aligned_cols=26 Identities=12% Similarity=-0.124 Sum_probs=22.1
Q ss_pred eeCCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 180 SPYSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 180 ~P~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
...|..++...++.+.+.++|++|..
T Consensus 255 dG~d~~~l~~al~~A~~~~gP~lI~v 280 (621)
T 2o1s_A 255 DGHDVLGLITTLKNMRDLKGPQFLHI 280 (621)
T ss_dssp ETTCHHHHHHHHHHHHHSCSEEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEE
Confidence 45689999999999998889998853
No 71
>1aba_A Glutaredoxin; electron transport; HET: MES; 1.45A {Enterobacteria phage T4} SCOP: c.47.1.1 PDB: 1aaz_A 1de1_A 1de2_A
Probab=63.62 E-value=9.9 Score=27.04 Aligned_cols=60 Identities=17% Similarity=0.154 Sum_probs=38.8
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEeeeccC-CCHH---HHHHHHhCC------CeEEEEecCCCCCCHHHH
Q 020510 249 IVGLSLKAAEILAKEGISAEVINLRSIRP-LDRS---TINASVRKT------NRLVTVEEGFPQHGVGAE 308 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P-~d~~---~l~~~~~~~------~~vvvvEe~~~~GGlg~~ 308 (325)
....+.+|.+.|++.|++.+.+|+..... -+.+ .|.+..... -..|+++++...||+-..
T Consensus 13 ~Cp~C~~ak~~L~~~gi~y~~idI~~~~~~~~~~~~~~l~~~~g~~~~~~~tvP~v~i~~g~~igG~d~l 82 (87)
T 1aba_A 13 KCGPCDNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTMPQVFAPDGSHIGGFDQL 82 (87)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEESCSBTTBCCHHHHHHHHHHHTCSCCTTCCSCEEECTTSCEEESHHHH
T ss_pred cCccHHHHHHHHHHcCCCEEEEEeeccccccCHHHHHHHHHHhCCCCCCCCccCEEEEECCEEEeCHHHH
Confidence 55678888899999999999999975421 2433 344333222 235666456667998553
No 72
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=63.60 E-value=13 Score=30.06 Aligned_cols=50 Identities=22% Similarity=0.314 Sum_probs=32.7
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEec
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe 298 (325)
+|.+-..|...++.|+++|++++++|+.. .|.+.+...+.+++.|++.=-
T Consensus 11 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~d~ii~Gsp 60 (161)
T 3hly_A 11 YGYSDRLSQAIGRGLVKTGVAVEMVDLRA---VDPQELIEAVSSARGIVLGTP 60 (161)
T ss_dssp STTHHHHHHHHHHHHHHTTCCEEEEETTT---CCHHHHHHHHHHCSEEEEECC
T ss_pred ChHHHHHHHHHHHHHHhCCCeEEEEECCC---CCHHHHHHHHHhCCEEEEEcC
Confidence 35555666677777877899998888764 345555555566766665533
No 73
>3f2v_A General stress protein 14; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: FMN; 2.00A {Treponema denticola}
Probab=62.28 E-value=23 Score=29.76 Aligned_cols=60 Identities=10% Similarity=0.019 Sum_probs=42.7
Q ss_pred HHHHHHHHHhcCCcEEEEEeeeccC---CCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 253 SLKAAEILAKEGISAEVINLRSIRP---LDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 253 a~~Aa~~L~~~Gi~~~Vi~~~~l~P---~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
+...++.+++.|.+++++|+..++| .|.+.+.+.+...+.||+.=--+ .+++-..+..++
T Consensus 19 ~~~l~~~~~~~g~ev~~~dL~~~~~~~~~dv~~~~~~l~~AD~iv~~~P~y-~~~~pa~lK~~i 81 (192)
T 3f2v_A 19 HKHWSDAVRQHTDRFTVHELYAVYPQGKIDVAAEQKLIETHDSLVWQFPIY-WFNCPPLLKQWL 81 (192)
T ss_dssp HHHHHHHHTTCTTTEEEEEHHHHCTTCCCCHHHHHHHHHTSSSEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHhCCCeEEEEEchhcCCCCchhHHHHHHHHHhCCEEEEEcChh-hcCCCHHHHHHH
Confidence 3444556667788999999998765 56777777888888777665544 577777666554
No 74
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=62.19 E-value=14 Score=31.02 Aligned_cols=65 Identities=8% Similarity=0.186 Sum_probs=41.6
Q ss_pred hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCH----------HHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 248 KIVGLSLKAAEILAKEGISAEVINLRSIRPLDR----------STINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 248 ~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~----------~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
+......+++..+.++|.+++++|+.-|-.|+. +.+.+.++..+.+|++---+ .|++...+..++
T Consensus 16 S~~~~la~~~~~~~~~~~~~~~idl~dLP~~~~d~~~~~p~~~~~l~~~i~~aD~~ii~tPeY-n~s~pg~LKn~i 90 (190)
T 3u7r_A 16 SLNHKLMKVLQKLAEGRLEFHLLHIGDLPHYNDDLWADAPESVLRLKDRIEHSDAVLAITPEY-NRSYPGMIKNAI 90 (190)
T ss_dssp CHHHHHHHHHHHHHTTTEEEEECCGGGSCCCCGGGGGGCCHHHHHHHHHHHTSSEEEEECCCB-TTBCCHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCEEEEEecccCCCCCCCcccCCCHHHHHHHHHHHhCCcEEEechhh-cccCCHHHHHHH
Confidence 334445555566666789999999887633432 34677788888776665544 577766665444
No 75
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=62.00 E-value=12 Score=29.64 Aligned_cols=48 Identities=4% Similarity=-0.091 Sum_probs=36.1
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCC-CHHHHHH
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL-DRSTINA 285 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~-d~~~l~~ 285 (325)
..++++||-|+.....+..++.|.+.|.++.++-.++-.-+ -.+.|.+
T Consensus 18 ~~~~llIaGG~GiaPl~sm~~~l~~~~~~v~l~g~R~~~~~~~~~el~~ 66 (142)
T 3lyu_A 18 FGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEK 66 (142)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHHHHTTCEEEEEEEEEGGGCCSHHHHHT
T ss_pred CCeEEEEECcCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHH
Confidence 46899999999999999999999888888888844554332 2444544
No 76
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=61.95 E-value=15 Score=34.82 Aligned_cols=71 Identities=11% Similarity=0.122 Sum_probs=49.7
Q ss_pred EEEEechhH----HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 242 TITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 242 ~Iia~G~~~----~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
++|.|++|. ..|...++.|+++|+++.++++..+..-|...+.+.+.+++.|++-=- +..|++-..+...|
T Consensus 268 v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~~~~~d~~~~~~s~i~~~i~~~~~ivlGsp-T~~~~~~p~~~~~l 342 (410)
T 4dik_A 268 VTVIYDSMYGFVENVMKKAIDSLKEKGFTPVVYKFSDEERPAISEILKDIPDSEALIFGVS-TYEAEIHPLMRFTL 342 (410)
T ss_dssp EEEEEECSSSHHHHHHHHHHHHHHHTTCEEEEEEECSSCCCCHHHHHHHSTTCSEEEEEEC-CTTSSSCHHHHHHH
T ss_pred eeeEEecccChHHHHHHHHHHHHHhcCCceEEEEeccCCCCCHHHHHHHHHhCCeEEEEeC-CcCCcCCHHHHHHH
Confidence 344465554 567777778888999999999988887787777777778877665443 44677655555444
No 77
>2amj_A Modulator of drug activity B; oxidoreductase, menadione, DT-diaphorase, montreal-kingston structural genomics initiative, BSGI; 1.80A {Escherichia coli} PDB: 2b3d_A*
Probab=61.90 E-value=23 Score=29.82 Aligned_cols=60 Identities=13% Similarity=0.050 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 251 GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 251 ~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
..+..+++.+++.|.+++++|+.. +.|.+.+.+.+...+.||+.=--+ .+++-..+..++
T Consensus 34 ~l~~~~~~~~~~~g~~v~~~dL~~--~~d~~~~~~~l~~AD~iV~~~P~y-~~s~pa~LK~~i 93 (204)
T 2amj_A 34 TLTEVADGTLRDLGHDVRIVRADS--DYDVKAEVQNFLWADVVIWQMPGW-WMGAPWTVKKYI 93 (204)
T ss_dssp HHHHHHHHHHHHTTCEEEEEESSS--CCCHHHHHHHHHHCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCc--cccHHHHHHHHHhCCEEEEECCcc-ccCCCHHHHHHH
Confidence 345566677777799999999984 678888888888888876665544 577777776555
No 78
>3l84_A Transketolase; TKT, structural genomics, center for structur genomics of infectious diseases, csgid, transferase; HET: MSE; 1.36A {Campylobacter jejuni} PDB: 3m6l_A* 3m34_A* 3m7i_A*
Probab=61.30 E-value=16 Score=36.80 Aligned_cols=98 Identities=14% Similarity=0.084 Sum_probs=57.0
Q ss_pred HHHHHHHHhccC------------CeeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeC-CCCCCCC
Q 020510 96 FTGIGVGAAYYG------------LKPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGV 158 (325)
Q Consensus 96 ~vg~A~GlA~~G------------~~p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~ 158 (325)
.++.|.|+|++- -+.++++. .+. ++ -+++.+.. ++. .++| ++++.. ++... .
T Consensus 119 gl~~AvG~AlA~~~~~~~~n~~~~d~~v~~v~-GDG~~~eG~~~Eal~~-A~~--------~~L~~livi~nnN~~~i-~ 187 (632)
T 3l84_A 119 GVANAVGFAMAAKKAQNLLGSDLIDHKIYCLC-GDGDLQEGISYEACSL-AGL--------HKLDNFILIYDSNNISI-E 187 (632)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCCEEEEE-EHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEET-T
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCeEEEEE-CCcchhhccHHHHHHH-HHH--------cCCCcEEEEEECCCccc-c
Confidence 455666666542 24445454 554 33 56676643 453 4665 444433 33221 1
Q ss_pred CCCc---chHHHHHHhcCCCcEEEee--CCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 159 GAQH---SHCYAAWYASVPGLKVLSP--YSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 159 G~tH---s~~~~a~~~~iP~~~V~~P--~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
+.++ ...+...+++. |+.++.- .|.+++...++.+.+.++|++|..
T Consensus 188 ~~~~~~~~~d~~~~~~a~-G~~~~~vdGhd~~~l~~al~~A~~~~~P~lI~v 238 (632)
T 3l84_A 188 GDVGLAFNENVKMRFEAQ-GFEVLSINGHDYEEINKALEQAKKSTKPCLIIA 238 (632)
T ss_dssp EEGGGTCCCCHHHHHHHT-TCEEEEEETTCHHHHHHHHHHHHTCSSCEEEEE
T ss_pred cchhhhcChhHHHHHHHc-CCeEEEEeeCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 2221 12345777777 8888733 278999999999988889999864
No 79
>1t0i_A YLR011WP; FMN binding protein, flavodoxin, azoreductase, oxidoreductase; HET: FMN; 2.00A {Saccharomyces cerevisiae} SCOP: c.23.5.4
Probab=61.20 E-value=21 Score=29.23 Aligned_cols=67 Identities=12% Similarity=0.155 Sum_probs=44.7
Q ss_pred chhHHHHHHHHHHHHhc------CCcEEEEEeee--ccCCCH--------------------HHHHHHHhCCCeEEEEec
Q 020510 247 SKIVGLSLKAAEILAKE------GISAEVINLRS--IRPLDR--------------------STINASVRKTNRLVTVEE 298 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~------Gi~~~Vi~~~~--l~P~d~--------------------~~l~~~~~~~~~vvvvEe 298 (325)
|.....+..+++.|++. |.+++++|+.. +.|++. +.+.+.+..++.||+.=-
T Consensus 14 ~~t~~la~~~~~~l~~~~~~~~~g~~v~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aD~iI~~sP 93 (191)
T 1t0i_A 14 RVCPEIAAYVKRTIENSEELIDQKLKIQVVDLQQIALPLYEDDDELIPAQIKSVDEYADSKTRSWSRIVNALDIIVFVTP 93 (191)
T ss_dssp CSHHHHHHHHHHHHHTCTTTTTTTCEEEEECHHHHCCCSSCCCCCSCGGGCCSGGGCSCHHHHHHHHHHHTCSEEEEEEE
T ss_pred CchHHHHHHHHHHHHHhhccCCCCceEEEEehhhcCCCCCCCccccccccccCcccCCcHHHHHHHHHHHhCCEEEEEec
Confidence 44555666677778765 78999999886 333322 345566778877766655
Q ss_pred CCCCCCHHHHHHHHHc
Q 020510 299 GFPQHGVGAEIWCAFF 314 (325)
Q Consensus 299 ~~~~GGlg~~v~~~l~ 314 (325)
-+ .+++...+..++-
T Consensus 94 ~y-~~~~p~~lK~~iD 108 (191)
T 1t0i_A 94 QY-NWGYPAALKNAID 108 (191)
T ss_dssp CB-TTBCCHHHHHHHH
T ss_pred eE-CCCCCHHHHHHHH
Confidence 44 5788888877664
No 80
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=60.43 E-value=28 Score=34.37 Aligned_cols=110 Identities=14% Similarity=0.043 Sum_probs=61.9
Q ss_pred CCceeec---hhhHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCC
Q 020510 83 PERVLDT---PITEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAA 155 (325)
Q Consensus 83 p~R~i~~---GIaE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~ 155 (325)
|.+|+.. |.- -..+++|.|+|++- -++++++. .+. ++..++.+.+ ++. .++|++++. .++..
T Consensus 403 ~~~~~~~~~~g~m-G~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~t-a~~--------~~l~~~ivv~NN~~~~ 471 (590)
T 1v5e_A 403 KNMWRTSPLFATM-GIAIPGGLGAKNTYPDRQVWNII-GDGAFSMTYPDVVT-NVR--------YNMPVINVVFSNTEYA 471 (590)
T ss_dssp TSEEECCCSSCCT-TCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHHH-HHH--------TTCCCEEEEEECSSCT
T ss_pred CCeEEcCCCCCcc-cChHHHHHHHHHhCCCCeEEEEE-echHHhchHHHHHH-HHH--------hCCCCEEEEEECCchH
Confidence 6677742 211 23456777777652 35555554 443 3334444432 333 356654443 32222
Q ss_pred --CC-CC--------C-CcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhC---CCcEEEE
Q 020510 156 --AG-VG--------A-QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRD---PDPVVFL 204 (325)
Q Consensus 156 --~g-~G--------~-tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~---~~Pv~ir 204 (325)
.. .. . .|.-.+..+..+. |+..+...+.+|+...++.+++. ++|++|-
T Consensus 472 ~~~~~q~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~gp~lie 534 (590)
T 1v5e_A 472 FIKNKYEDTNKNLFGVDFTDVDYAKIAEAQ-GAKGFTVSRIEDMDRVMAEAVAANKAGHTVVID 534 (590)
T ss_dssp TGGGTTSSSCCSCCCCCCCCCCHHHHHHHT-TSEEEEECBHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhcCCCccccCCCCCHHHHHHHc-CCEEEEECCHHHHHHHHHHHHHhcCCCCCEEEE
Confidence 11 10 1 1212344566666 77777888999999999999887 8999884
No 81
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=59.82 E-value=24 Score=34.50 Aligned_cols=110 Identities=15% Similarity=0.110 Sum_probs=63.3
Q ss_pred CCceeec---hhhHHHHHHHHHHHhccC---CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEE--eCCC
Q 020510 83 PERVLDT---PITEAGFTGIGVGAAYYG---LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFR--GPNG 153 (325)
Q Consensus 83 p~R~i~~---GIaE~~~vg~A~GlA~~G---~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G 153 (325)
|.+|+.. |.- -..+++|.|+|++. -++++++. .+. ++..+..+.+ ++. .++|++++ ..++
T Consensus 409 ~~~~~~~~g~g~~-G~~l~~AiGaa~a~~~~~~~vv~i~-GDG~~~~~~~~L~t-a~~--------~~l~~~ivv~nN~~ 477 (563)
T 2uz1_A 409 PGGFLCHGYLGSM-GVGFGTALGAQVADLEAGRRTILVT-GDGSVGYSIGEFDT-LVR--------KQLPLIVIIMNNQS 477 (563)
T ss_dssp CSEEECCCTTCCT-TTHHHHHHHHHHHHHHHTCEEEEEE-EHHHHGGGTTHHHH-HHH--------HTCCCEEEEEECSB
T ss_pred CCeEECCCCCccc-cChHHHHHHHHHHhhCCCCeEEEEE-ccHHHhCCHHHHHH-HHH--------hCCCeEEEEEeCCc
Confidence 6778862 222 25567777877653 45555554 443 2223444432 332 35665443 3323
Q ss_pred CC--C-------C----CCCC-cchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 154 AA--A-------G----VGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 154 ~~--~-------g----~G~t-Hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
.. . + .+.. |.-.+..+.... |+..+...+.+|+...++.+++.++|++|-
T Consensus 478 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 541 (563)
T 2uz1_A 478 WGATLHFQQLAVGPNRVTGTRLENGSYHGVAAAF-GADGYHVDSVESFSAALAQALAHNRPACIN 541 (563)
T ss_dssp CHHHHHHHHHHTCTTCCCSCBCCCCCHHHHHHHT-TCEEEEECSHHHHHHHHHHHHHSSSCEEEE
T ss_pred chHHHHHHHHhcCCCcccCCcCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCCEEEE
Confidence 21 0 0 0111 212334566666 777888899999999999999988999884
No 82
>2fzv_A Putative arsenical resistance protein; flavin binding protein, structural genomics, PSI, protein ST initiative; 1.70A {Shigella flexneri 2A} SCOP: c.23.5.4
Probab=59.55 E-value=16 Score=32.84 Aligned_cols=74 Identities=9% Similarity=-0.062 Sum_probs=47.4
Q ss_pred CcEEEEEec-----hhHHHHHHHHHHHHhcCCcEEEEEeeeccC-------CC--HHHHHHHHhCCCeEEEEecCCCCCC
Q 020510 239 KDVTITAFS-----KIVGLSLKAAEILAKEGISAEVINLRSIRP-------LD--RSTINASVRKTNRLVTVEEGFPQHG 304 (325)
Q Consensus 239 ~dv~Iia~G-----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P-------~d--~~~l~~~~~~~~~vvvvEe~~~~GG 304 (325)
.++++|... .....+..+++.+++.|.+++++|+..+.. .+ .+.+.+.+...+.||++---+ .++
T Consensus 59 mKILiI~GS~R~~S~T~~La~~~~~~l~~~G~eveiidL~dlpl~~~d~~~~~d~v~~l~e~I~~ADgiV~aSP~Y-n~s 137 (279)
T 2fzv_A 59 VRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDDHPAVKELRALSEWSEGQVWCSPER-HGQ 137 (279)
T ss_dssp CEEEEEESCCSSSCHHHHHHHHHHHHHHHTTCEEEEBCCTTCCCTTTSGGGCCHHHHHHHHHHHHCSEEEEEEEEE-TTE
T ss_pred CEEEEEEeCCCCCCHHHHHHHHHHHHHhhCCCEEEEEehhcCCCCccCccCCCHHHHHHHHHHHHCCeEEEEcCcc-ccC
Confidence 356555422 234556667778888899999999988631 12 344666777777766554433 577
Q ss_pred HHHHHHHHH
Q 020510 305 VGAEIWCAF 313 (325)
Q Consensus 305 lg~~v~~~l 313 (325)
+...+..+|
T Consensus 138 ipg~LKn~I 146 (279)
T 2fzv_A 138 ITSVMKAQI 146 (279)
T ss_dssp ECHHHHHHH
T ss_pred cCHHHHHHH
Confidence 777666555
No 83
>3l78_A Regulatory protein SPX; transcription, transcriptional factor, disulfide bond, redox-active center, transcription regulati; 1.90A {Streptococcus mutans} SCOP: c.47.1.12
Probab=59.39 E-value=16 Score=28.15 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=35.9
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~ 290 (325)
-+....+.+|.+.|++.|++.+++|+.. .|.+.+.|.+.+++.
T Consensus 7 ~~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~el~~~l~~~ 49 (120)
T 3l78_A 7 SPSCTSCRKARAWLNRHDVVFQEHNIMT-SPLSRDELLKILSYT 49 (120)
T ss_dssp CSSCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHcCCCeEEEeccc-CCCcHHHHHHHHhhc
Confidence 3556788899999999999999999875 688999888888754
No 84
>3fz4_A Putative arsenate reductase; APC61768, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.38A {Streptococcus mutans UA159} SCOP: c.47.1.0
Probab=59.02 E-value=14 Score=28.55 Aligned_cols=44 Identities=14% Similarity=0.143 Sum_probs=37.5
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
-.....+.+|.+.|+++|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 10 ~~~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 53 (120)
T 3fz4_A 10 YPKCSTCRRAKAELDDLAWDYDAIDIKK-NPPAASLIRNWLENSG 53 (120)
T ss_dssp CSSCHHHHHHHHHHHHHTCCEEEEETTT-SCCCHHHHHHHHHHSC
T ss_pred CCCChHHHHHHHHHHHcCCceEEEEecc-CchhHHHHHHHHHHcC
Confidence 3556788999999999999999999975 7899999998888764
No 85
>2o1x_A 1-deoxy-D-xylulose-5-phosphate synthase; thiamin, isoprenoid, DXS, transferase; HET: TDP; 2.90A {Deinococcus radiodurans}
Probab=58.92 E-value=28 Score=34.86 Aligned_cols=26 Identities=12% Similarity=0.098 Sum_probs=21.9
Q ss_pred eeCCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 180 SPYSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 180 ~P~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
...|..++...++.+.+.++|++|..
T Consensus 260 dG~d~~~l~~al~~A~~~~~P~lI~v 285 (629)
T 2o1x_A 260 DGHNVQELVWLLERLVDLDGPTILHI 285 (629)
T ss_dssp ESSCHHHHHHHHHHHTTSSSEEEEEE
T ss_pred CCcCHHHHHHHHHHHHhcCCCEEEEE
Confidence 45689999999999988889998853
No 86
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=58.31 E-value=43 Score=27.90 Aligned_cols=49 Identities=10% Similarity=0.259 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-----CCeEEEEecCC
Q 020510 250 VGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-----TNRLVTVEEGF 300 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-----~~~vvvvEe~~ 300 (325)
-....++++.++++||.+.+|.+-+-.. +.+ +.+++++ ...++++.++.
T Consensus 121 ~~~~~~~a~~lk~~gi~v~~Ig~G~~~~-~~~-l~~la~~~n~~~~s~~~~~~~~~ 174 (192)
T 2x5n_A 121 EKNLIRLAKRMKKNNVAIDIIHIGELQN-ESA-LQHFIDAANSSDSCHLVSIPPSP 174 (192)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEESCC----CH-HHHHHHHHCSTTCCEEEEECCCS
T ss_pred chhHHHHHHHHHHCCCEEEEEEeCCCCc-cHH-HHHHHHhccCCCceEEEEecCcc
Confidence 4567789999999999999999987643 223 5544443 23677777765
No 87
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=58.04 E-value=20 Score=35.37 Aligned_cols=36 Identities=8% Similarity=-0.120 Sum_probs=29.4
Q ss_pred HHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 168 AWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 168 a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
.+.... |+.-+...+++|+...++.+++.++|++|-
T Consensus 520 ~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 555 (578)
T 3lq1_A 520 FAAAFY-DADYHEAKSVDELEEAIDKASYHKGLDIIE 555 (578)
T ss_dssp HHHHHT-TCEEEECCSHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHc-CCceEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 344444 677788899999999999999988999985
No 88
>1wik_A Thioredoxin-like protein 2; picot homology 2 domain, picot protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: c.47.1.1
Probab=57.42 E-value=10 Score=28.44 Aligned_cols=67 Identities=18% Similarity=0.128 Sum_probs=42.9
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHh-CCCeEEEEecCCCCCCHH
Q 020510 238 GKDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-KTNRLVTVEEGFPQHGVG 306 (325)
Q Consensus 238 G~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~-~~~~vvvvEe~~~~GGlg 306 (325)
..+++|.+.| .....+.+|.+.|++.|++...+|+..= |--.+.+.+... .+-.+|+++. ...||+-
T Consensus 14 ~~~vvvy~~g~~~~~~Cp~C~~ak~~L~~~~i~~~~vdi~~~-~~~~~~l~~~~g~~~vP~ifi~g-~~igG~d 85 (109)
T 1wik_A 14 KASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED-EEVRQGLKTFSNWPTYPQLYVRG-DLVGGLD 85 (109)
T ss_dssp TSSEEEEESSTTTCCCSSTHHHHHHHHHHTCSCEEEEESSSC-HHHHHHHHHHHSCCSSCEEECSS-SEEECHH
T ss_pred cCCEEEEEecCCCCCCCchHHHHHHHHHHcCCCeEEEECCCC-HHHHHHHHHHhCCCCCCEEEECC-EEEcCHH
Confidence 3568888887 6667888899999999999999998751 111122333222 1212455554 4578874
No 89
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=57.10 E-value=15 Score=28.45 Aligned_cols=30 Identities=13% Similarity=0.170 Sum_probs=23.0
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeec
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSI 275 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l 275 (325)
+|.+-..|...++.|++.|++++++++...
T Consensus 9 tGnT~~iA~~ia~~l~~~g~~v~~~~~~~~ 38 (138)
T 5nul_A 9 TGNTEKMAELIAKGIIESGKDVNTINVSDV 38 (138)
T ss_dssp SSHHHHHHHHHHHHHHHTTCCCEEEEGGGC
T ss_pred CchHHHHHHHHHHHHHHCCCeEEEEEhhhC
Confidence 456667777777788888999999988654
No 90
>2wci_A Glutaredoxin-4; redox-active center, iron-sulfur cluster scaffolder, Fe2S2, homodimer, transport, glutathione, thioredoxin fold; HET: GSH; 1.90A {Escherichia coli} PDB: 1yka_A
Probab=57.10 E-value=13 Score=29.45 Aligned_cols=67 Identities=16% Similarity=0.103 Sum_probs=43.4
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-CCeEEEEecCCCCCCHHH
Q 020510 239 KDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 239 ~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-~~~vvvvEe~~~~GGlg~ 307 (325)
.+++|.+.| .....+.+|.+.|++.|++.+.+|+..= |--.+.|.+.... +-.+|+++.. ..||+..
T Consensus 35 ~~Vvvy~ks~~~~~~Cp~C~~ak~~L~~~gv~y~~vdI~~d-~~~~~~L~~~~G~~tvP~VfI~G~-~iGG~d~ 106 (135)
T 2wci_A 35 NPILLYMKGSPKLPSCGFSAQAVQALAACGERFAYVDILQN-PDIRAELPKYANWPTFPQLWVDGE-LVGGCDI 106 (135)
T ss_dssp CSEEEEESBCSSSBSSHHHHHHHHHHHTTCSCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEETTE-EEESHHH
T ss_pred CCEEEEEEecCCCCCCccHHHHHHHHHHcCCceEEEECCCC-HHHHHHHHHHHCCCCcCEEEECCE-EEEChHH
Confidence 468888887 6778899999999999999999998751 1111223322221 2235666554 4688843
No 91
>2wem_A Glutaredoxin-related protein 5; chromosome 14 open reading frame 87, Fe/S cluster, oxidoreductase, thioredoxin family, GLRX5, FLB4739, C14ORF87; HET: GTT; 2.40A {Homo sapiens} PDB: 2wul_A*
Probab=56.76 E-value=17 Score=28.03 Aligned_cols=65 Identities=17% Similarity=0.101 Sum_probs=43.9
Q ss_pred CCcEEEEEec----hhHHHHHHHHHHHHhcCCc-EEEEEeeeccCCCHHHHHHHHh----CCCeEEEEecCCCCCCHHH
Q 020510 238 GKDVTITAFS----KIVGLSLKAAEILAKEGIS-AEVINLRSIRPLDRSTINASVR----KTNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 238 G~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~-~~Vi~~~~l~P~d~~~l~~~~~----~~~~vvvvEe~~~~GGlg~ 307 (325)
..+|+|++.+ .....+.+|.+.|++.|+. .+.+|+.. |.+...++.+ .+-..|+++.. ..||+-.
T Consensus 19 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~vdV~~----d~~~~~~l~~~tg~~tvP~vfI~g~-~IGG~d~ 92 (118)
T 2wem_A 19 KDKVVVFLKGTPEQPQCGFSNAVVQILRLHGVRDYAAYNVLD----DPELRQGIKDYSNWPTIPQVYLNGE-FVGGCDI 92 (118)
T ss_dssp HSSEEEEESBCSSSBSSHHHHHHHHHHHHTTCCCCEEEESSS----CHHHHHHHHHHHTCCSSCEEEETTE-EEESHHH
T ss_pred cCCEEEEEecCCCCCccHHHHHHHHHHHHcCCCCCEEEEcCC----CHHHHHHHHHHhCCCCcCeEEECCE-EEeChHH
Confidence 4579999988 3778899999999999994 99999863 4333222211 22235667554 4688754
No 92
>2e6k_A Transketolase; structural genomics, NPPSFA, national project protein structural and functional analyses; 2.09A {Thermus thermophilus}
Probab=56.73 E-value=38 Score=34.03 Aligned_cols=85 Identities=15% Similarity=0.078 Sum_probs=49.8
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeCC-CCCCCCCCCc---chHHHHHHhcCCCcEEEe
Q 020510 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGPN-GAAAGVGAQH---SHCYAAWYASVPGLKVLS 180 (325)
Q Consensus 109 ~p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~~-G~~~g~G~tH---s~~~~a~~~~iP~~~V~~ 180 (325)
+.++++. .+. ++ ..++.+.. ++. .++| ++++..+ +... .+.++ ...+...+... |+.++.
T Consensus 151 ~~v~~~~-GDG~~~eG~~~Eal~~-A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 218 (651)
T 2e6k_A 151 HYTYVLA-SDGDLMEGVSGEAASL-AGH--------WGLSKLIVFWDDNRISI-DGPTDLAFTEDVLARYRAY-GWQTLR 218 (651)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECCEET-TEEGGGTCCSCHHHHHHHT-TCEEEE
T ss_pred CEEEEEE-ChhhhchhHHHHHHHH-HHH--------cCCCeEEEEEECCCccc-ccccccccCccHHHHHHhC-CCeEEE
Confidence 3444454 554 44 45666643 453 4666 5555433 3221 12221 12334677776 888873
Q ss_pred eC---CHHHHHHHHHHhHhCCCcEEEEe
Q 020510 181 PY---SSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 181 P~---d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
+. |..++...++.+.+.++|++|..
T Consensus 219 ~vdG~d~~~l~~al~~a~~~~~P~lI~~ 246 (651)
T 2e6k_A 219 VEDVNDLEALRKAIKLAKLDERPTLIAV 246 (651)
T ss_dssp ESCTTCHHHHHHHHHHHHHSSSCEEEEE
T ss_pred EeCCCCHHHHHHHHHHHHHCCCCEEEEE
Confidence 43 78999999999888788998854
No 93
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=56.33 E-value=17 Score=35.55 Aligned_cols=36 Identities=22% Similarity=0.172 Sum_probs=29.6
Q ss_pred HHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 168 AWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 168 a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
.+.... |+.-+...+++|+...++.+++.++|++|-
T Consensus 499 ~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 534 (556)
T 3hww_A 499 HAAAMF-ELKYHRPQNWQELETAFADAWRTPTTTVIE 534 (556)
T ss_dssp HHHHHT-TCEEECCSSHHHHHHHHHHHTTSSSEEEEE
T ss_pred HHHHHc-CCcEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 444444 677888899999999999999988999984
No 94
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=55.81 E-value=17 Score=35.71 Aligned_cols=111 Identities=19% Similarity=0.193 Sum_probs=62.6
Q ss_pred CCceeechh--hHHHHHHHHHHHhccCCeeEEecccccHH-HHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYGLKPVVEFMTFNFS-MQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAAG 157 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G~~p~v~~~~~~f~-~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~g 157 (325)
|.++++.|. +=-..+++|.|++++.-++++++. .+.. +..+..+- .+.. .++|++++. .+|.+..
T Consensus 411 p~~~~~~g~~g~~G~~l~~AiGaa~a~~~~vv~i~-GDGsf~~~~~el~-ta~~--------~~l~~~ivv~NN~~~~~~ 480 (564)
T 2q28_A 411 PRRRLDCGTWGVMGIGMGYAIGASVTSGSPVVAIE-GDSAFGFSGMEIE-TICR--------YNLPVTIVIFNNGGIYRG 480 (564)
T ss_dssp SSCEEESTTTTCTTCHHHHHHHHHHHHCSCEEEEE-EHHHHHTTGGGHH-HHHH--------TTCCEEEEEEECSBSSCS
T ss_pred CCeEecCCCCCcccchHHHHHHHhhcCCCcEEEEE-cchHhhccHHHHH-HHHH--------hCCCeEEEEEeCchhHHH
Confidence 778877543 112357777887776445555554 4432 22233332 2333 467755543 3342111
Q ss_pred C-------C---C---CcchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 158 V-------G---A---QHSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 158 ~-------G---~---tHs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
. + . .|.-.+..+...+ |+..+...+++|+...++++++.++|++|-
T Consensus 481 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~p~lie 539 (564)
T 2q28_A 481 DGVDLSGAGAPSPTDLLHHARYDKLMDAF-RGVGYNVTTTDELRHALTTGIQSRKPTIIN 539 (564)
T ss_dssp CCCCTTSSCCCCTTBCCTTCCGGGGGGGG-TCEEEEECSHHHHHHHHHHHHHHTSCEEEE
T ss_pred HHHHHhccCCccccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 1 1 0 1101223445554 677788899999999999999888999884
No 95
>1rw1_A Conserved hypothetical protein YFFB; thioredoxin fold, structure 2 function project, S2F, structu genomics, unknown function; HET: MSE IPA; 1.02A {Pseudomonas aeruginosa} SCOP: c.47.1.12
Probab=55.31 E-value=12 Score=28.46 Aligned_cols=44 Identities=14% Similarity=0.155 Sum_probs=35.0
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
-+....+.+|.+.|++.|++.+++|+.. .|++.+.+.+.+++.+
T Consensus 7 ~~~C~~C~kak~~L~~~gi~~~~~di~~-~~~~~~~l~~~~~~~g 50 (114)
T 1rw1_A 7 IKACDTMKKARTWLDEHKVAYDFHDYKA-VGIDREHLRRWCAEHG 50 (114)
T ss_dssp CSSCHHHHHHHHHHHHTTCCEEEEEHHH-HCCCHHHHHHHHHHHC
T ss_pred CCCChHHHHHHHHHHHCCCceEEEeecC-CCCCHHHHHHHHHhCC
Confidence 3556788999999999999999999974 5788888777765444
No 96
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=53.69 E-value=31 Score=34.23 Aligned_cols=111 Identities=14% Similarity=0.064 Sum_probs=64.8
Q ss_pred CCceeechh-h-HHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEE--eCCCCCC
Q 020510 83 PERVLDTPI-T-EAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFR--GPNGAAA 156 (325)
Q Consensus 83 p~R~i~~GI-a-E~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G~~~ 156 (325)
|.+|++.|- . --..+++|.|+|++. -++++++. .+. ++..+..+-+ ++. .++|++++ ..++...
T Consensus 432 ~~~~~~~g~~G~~G~~l~~AiGaala~~~~~vv~i~-GDGs~~~~~~~L~t-a~~--------~~l~~~ivv~NN~~~~~ 501 (616)
T 2pan_A 432 DRHWINCGQAGPLGWTIPAALGVCAADPKRNVVAIS-GDFDFQFLIEELAV-GAQ--------FNIPYIHVLVNNAYLGL 501 (616)
T ss_dssp TTSEEECTTTCCTTCHHHHHHHHHHHCTTCEEEEEE-EHHHHHHTGGGHHH-HHH--------TTCCCEEEEEECSBCHH
T ss_pred CCeEEcCCCcccccchHHHHHHHHHhCCCCcEEEEE-cchhhhCCHHHHHH-HHH--------hCCCeEEEEEECCcchH
Confidence 678998654 2 223677888888763 35666555 443 2333444432 333 35665443 3322210
Q ss_pred ---------C--------CCC--C-c---chHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHh----CCCcEEEE
Q 020510 157 ---------G--------VGA--Q-H---SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFL 204 (325)
Q Consensus 157 ---------g--------~G~--t-H---s~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~----~~~Pv~ir 204 (325)
+ .+. + | .-.+..+...+ |+..+...+.+|+...++.+++ .++|++|-
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~~~~~gp~lIe 575 (616)
T 2pan_A 502 IRQSQRAFDMDYCVQLAFENINSSEVNGYGVDHVKVAEGL-GCKAIRVFKPEDIAPAFEQAKALMAQYRVPVVVE 575 (616)
T ss_dssp HHHHGGGGTCCCSCBCCCCCTTCGGGTTCCCCHHHHHHHT-TCEEEEECSGGGHHHHHHHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHhcCCccccccccccccccCCCCCCCHHHHHHHc-CCeEEEECCHHHHHHHHHHHHhhcccCCCcEEEE
Confidence 0 010 1 1 01234566665 6777778899999999999988 78999884
No 97
>3gkx_A Putative ARSC family related protein; ARSC family protein, structural genomi 2, protein structure initiative; 2.20A {Bacteroides fragilis} SCOP: c.47.1.0
Probab=53.44 E-value=13 Score=28.82 Aligned_cols=44 Identities=11% Similarity=-0.001 Sum_probs=37.1
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
-.....+.+|.+.|+++|++.+++|+.. .|.+.+.|.+.+++.+
T Consensus 11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 54 (120)
T 3gkx_A 11 YPACSTCQKAKKWLIENNIEYTNRLIVD-DNPTVEELKAWIPLSG 54 (120)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEEETTT-TCCCHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHcCCceEEEeccc-CcCCHHHHHHHHHHcC
Confidence 4566788999999999999999999976 6889998888887554
No 98
>1r9j_A Transketolase; domains, EACH of the alpha/beta type, thiamine diphosphate binding domain, transferase; HET: TPP; 2.22A {Leishmania mexicana mexicana} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=53.19 E-value=76 Score=31.97 Aligned_cols=84 Identities=14% Similarity=0.129 Sum_probs=49.9
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeC-CCCCCCCCCCc---chHHHHHHhcCCCcEEE-e
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQH---SHCYAAWYASVPGLKVL-S 180 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~tH---s~~~~a~~~~iP~~~V~-~ 180 (325)
.++++. .+. ++ ..++.+.. ++. .++| ++++.. ++.. -.|.+. ...+...+++. |+.++ .
T Consensus 150 ~v~~~~-GDG~~~eG~~~Eal~~-A~~--------~~L~~li~i~d~N~~~-i~~~~~~~~~~d~~~~~~a~-G~~~~~~ 217 (673)
T 1r9j_A 150 YTYVYC-GDGCLMEGVCQEALSL-AGH--------LALEKLIVIYDSNYIS-IDGSTSLSFTEQCHQKYVAM-GFHVIEV 217 (673)
T ss_dssp CEEEEE-CHHHHHSHHHHHHHHH-HHH--------HTCTTEEEEEEECSBC-SSSBGGGTCCCCHHHHHHHT-TCEEEEE
T ss_pred EEEEEE-CcchhcccHHHHHHHH-HHH--------hCCCcEEEEEECCCCc-cccchhhccCHhHHHHHHHC-CCeEEEE
Confidence 344444 554 44 44676643 443 4665 555543 2332 122222 22345677776 88888 4
Q ss_pred e---CCHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 181 P---YSSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 181 P---~d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
- .|..++..+++.+.+ .++|++|..
T Consensus 218 vdG~~d~~~l~~Al~~A~~~~~~P~lI~~ 246 (673)
T 1r9j_A 218 KNGDTDYEGLRKALAEAKATKGKPKMIVQ 246 (673)
T ss_dssp SCTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred eCCCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 3 688999999999887 678998864
No 99
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=52.40 E-value=7.4 Score=38.71 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=55.3
Q ss_pred HHHHHHHHHhccCCeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC--C-CCCC-------
Q 020510 95 GFTGIGVGAAYYGLKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA--G-VGAQ------- 161 (325)
Q Consensus 95 ~~vg~A~GlA~~G~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~--g-~G~t------- 161 (325)
..++.|.|+|++--++++++. .+. .+..+..+- .++. .++|++++. .+|... . .+.+
T Consensus 459 ~~l~~AiGaala~~~~vv~i~-GDGsf~~~~~eL~-ta~~--------~~lp~~ivv~NN~~~~i~~~~~~~q~~~~~~~ 528 (604)
T 2x7j_A 459 GVVSSAMGVCEGTKAPVTLVI-GDLSFYHDLNGLL-AAKK--------LGIPLTVILVNNDGGGIFSFLPQASEKTHFED 528 (604)
T ss_dssp SHHHHHHHHHHHHTSCEEEEE-EHHHHHHTGGGGH-HHHH--------HCCCEEEEEEECSSCGGGGGSGGGSCHHHHHH
T ss_pred cHHHHHHHHHhcCCCcEEEEE-ccHHHHhHHHHHH-Hhhh--------cCCCeEEEEEeCCCCcccccCCCCccchhhHh
Confidence 467778887776345666554 443 222333332 2332 467765543 223221 0 0110
Q ss_pred -----cchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 162 -----HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 162 -----Hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
|.-.+..+.... |+..+...+.+|+...++.+++.++|++|-
T Consensus 529 ~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 575 (604)
T 2x7j_A 529 LFGTPTGLDFKHAAALY-GGTYSCPASWDEFKTAYAPQADKPGLHLIE 575 (604)
T ss_dssp HTTCCCCCCTHHHHHHT-TCEEECCSSHHHHHHHCCCCCSSCCEEEEE
T ss_pred hccCCCCCCHHHHHHHc-CCeEEecCCHHHHHHHHHHHHhCCCCEEEE
Confidence 101122344444 678888899999999998888778898884
No 100
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=52.34 E-value=12 Score=30.65 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=24.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
.||+||+.|.. .+.+|-.|.+.|+++.|++-
T Consensus 3 ~dV~IIGaGpa---GL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 3 VPIAIIGTGIA---GLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CCEEEECCSHH---HHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHH---HHHHHHHHHHCCCCEEEEEC
Confidence 37999998854 34466678889999999984
No 101
>3rdw_A Putative arsenate reductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 2.20A {Yersinia pestis}
Probab=51.59 E-value=15 Score=28.52 Aligned_cols=44 Identities=11% Similarity=0.228 Sum_probs=37.5
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
-.....+.+|.+.|+++|++.+.+|+.. .|.+.+.|.+.+++.+
T Consensus 12 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~~~~eL~~~l~~~g 55 (121)
T 3rdw_A 12 NPRCSKSRETLALVEQQGITPQVVLYLE-TPPSVDKLKELLQQLG 55 (121)
T ss_dssp CTTCHHHHHHHHHHHTTTCCCEEECTTT-SCCCHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHHHcCCCcEEEeecc-CCCcHHHHHHHHHhcC
Confidence 3556788999999999999999999876 6899999988888775
No 102
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=51.06 E-value=62 Score=29.71 Aligned_cols=75 Identities=17% Similarity=0.056 Sum_probs=47.9
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee-------------ccCCCHHHHHHHHhCCCeEEEEecCCCCC
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS-------------IRPLDRSTINASVRKTNRLVTVEEGFPQH 303 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~-------------l~P~d~~~l~~~~~~~~~vvvvEe~~~~G 303 (325)
.|+.+.|++.|.... ..++.+++.|+++-++|... ....|.+.+.+.+++.+ +++.|-...
T Consensus 13 ~~k~IlIlG~G~~g~---~la~aa~~~G~~vi~~d~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~~d-vI~~~~e~~-- 86 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGR---MMALAAKEMGYKIAVLDPTKNSPCAQVADIEIVASYDDLKAIQHLAEISD-VVTYEFENI-- 86 (389)
T ss_dssp TTSEEEEECCSHHHH---HHHHHHHHTTCEEEEEESSTTCTTTTTCSEEEECCTTCHHHHHHHHHTCS-EEEESCCCC--
T ss_pred CCCEEEEECCCHHHH---HHHHHHHHcCCEEEEEeCCCCCchHHhCCceEecCcCCHHHHHHHHHhCC-Eeeeccccc--
Confidence 567899999997544 44555666799999998532 23456778888887765 566654432
Q ss_pred CHHHHHHHHHcCCCcc
Q 020510 304 GVGAEIWCAFFPPAWL 319 (325)
Q Consensus 304 Glg~~v~~~l~~~~~~ 319 (325)
...+++.+.+.+++
T Consensus 87 --~~~~~~~l~~~g~~ 100 (389)
T 3q2o_A 87 --DYRCLQWLEKHAYL 100 (389)
T ss_dssp --CHHHHHHHHHHSCC
T ss_pred --cHHHHHHHHhhCcc
Confidence 23444455444443
No 103
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=50.74 E-value=28 Score=33.71 Aligned_cols=111 Identities=17% Similarity=0.155 Sum_probs=62.2
Q ss_pred CCceeech-hhHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC-
Q 020510 83 PERVLDTP-ITEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA- 156 (325)
Q Consensus 83 p~R~i~~G-IaE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~- 156 (325)
|.+|+..+ -+=-..+++|.|+|++- -++++++. .+. ++..++.+-+ ++. .++|++++. .++...
T Consensus 392 ~~~~~~~~gg~~G~~l~~A~G~a~a~~~~~vv~~~-GDG~~~~~~~~l~~-a~~--------~~l~~~ivv~nN~~~~~~ 461 (528)
T 1q6z_A 392 PGSYYFCAAGGLGFALPAAIGVQLAEPERQVIAVI-GDGSANYSISALWT-AAQ--------YNIPTIFVIMNNGTYGAL 461 (528)
T ss_dssp SSCEEECTTCCTTSHHHHHHHHHHHCTTSCEEEEE-EHHHHTTTGGGHHH-HHH--------HTCCCEEEEEECSBCHHH
T ss_pred CCcEECCCCccccchHHHHHHHHHhCCCCcEEEEE-CCcHHHhhHHHHHH-HHH--------hCCCeEEEEEeCCcchHh
Confidence 56776532 11124456777877653 35666554 443 2333444433 333 356655443 322211
Q ss_pred -C----------CCCC-cchHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 -G----------VGAQ-HSHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 -g----------~G~t-Hs~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
. .+.. |.-.+..+.... |+..+...+.+|+...++.+++.++|++|-
T Consensus 462 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 520 (528)
T 1q6z_A 462 RWFAGVLEAENVPGLDVPGIDFRALAKGY-GVQALKADNLEQLKGSLQEALSAKGPVLIE 520 (528)
T ss_dssp HHHHHHHTCCSCCSCBCCCCCHHHHHHHH-TCEEEEESSHHHHHHHHHHHHTCSSCEEEE
T ss_pred HHHHHHhcCCCcccCCCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHHCCCcEEEE
Confidence 0 0111 212334555555 677778889999999999999888999884
No 104
>2kok_A Arsenate reductase; brucellosis, zoonotic, oxidoreductase, S genomics, seattle structural genomics center for infectious ssgcid; NMR {Brucella abortus}
Probab=50.71 E-value=18 Score=27.77 Aligned_cols=49 Identities=24% Similarity=0.255 Sum_probs=38.2
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
++|.+. +....+.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.+
T Consensus 7 i~iY~~-~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~~l~~~~~~~g 55 (120)
T 2kok_A 7 VTIYGI-KNCDTMKKARIWLEDHGIDYTFHDYKK-EGLDAETLDRFLKTVP 55 (120)
T ss_dssp EEEEEC-SSCHHHHHHHHHHHHHTCCEEEEEHHH-HCCCHHHHHHHHHHSC
T ss_pred EEEEEC-CCChHHHHHHHHHHHcCCcEEEEeeeC-CCCCHHHHHHHHHHcC
Confidence 455443 455788899999999999999999874 4888888888777665
No 105
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=50.41 E-value=19 Score=30.68 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=36.9
Q ss_pred CCcEEEEEechhH----HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEE
Q 020510 238 GKDVTITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLV 294 (325)
Q Consensus 238 G~dv~Iia~G~~~----~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vv 294 (325)
|+.+++|.|++.. .......+.|++.|+++.++++.. -+.+.+.+.+++.+.|+
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~---~~~~~~~~~l~~ad~I~ 84 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIAT---ESLGEITTKLRKNDFIY 84 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTT---SCHHHHHHHHHHSSEEE
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecC---CChHHHHHHHHhCCEEE
Confidence 5789999988762 234455666777799888877655 35555556677777655
No 106
>1z3e_A Regulatory protein SPX; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: c.47.1.12 PDB: 3gfk_A 3ihq_A
Probab=49.63 E-value=36 Score=26.46 Aligned_cols=48 Identities=29% Similarity=0.207 Sum_probs=37.3
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~ 290 (325)
++|. +-+....+.+|.+.|++.|++.+++|+.. .|.+.+.+.+.+++.
T Consensus 3 i~lY-~~~~C~~C~ka~~~L~~~gi~y~~~di~~-~~~~~~el~~~l~~~ 50 (132)
T 1z3e_A 3 VTLY-TSPSCTSCRKARAWLEEHEIPFVERNIFS-EPLSIDEIKQILRMT 50 (132)
T ss_dssp EEEE-ECTTCHHHHHHHHHHHHTTCCEEEEETTT-SCCCHHHHHHHHHTC
T ss_pred EEEE-eCCCChHHHHHHHHHHHcCCceEEEEccC-CCccHHHHHHHHHHc
Confidence 3443 34566888999999999999999999875 678888888877654
No 107
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=49.28 E-value=17 Score=30.37 Aligned_cols=69 Identities=14% Similarity=0.124 Sum_probs=44.3
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCC-----------------CH-HHHHHHHhCCCeEEEEecCCCCCCHHH
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPL-----------------DR-STINASVRKTNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~-----------------d~-~~l~~~~~~~~~vvvvEe~~~~GGlg~ 307 (325)
+|.+-..|..+++.|++.|.+++++++....|. |. +.+.+.+..++.||+.=--+ .|++..
T Consensus 17 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~aD~ii~gsP~y-~~~~~~ 95 (211)
T 1ydg_A 17 TGTGYAMAQEAAEAGRAAGAEVRLLKVRETAPQDVIDGQDAWKANIEAMKDVPEATPADLEWAEAIVFSSPTR-FGGATS 95 (211)
T ss_dssp SSHHHHHHHHHHHHHHHTTCEEEEEECCCCSCHHHHTTCHHHHHHHHHTTTSCBCCHHHHHHCSEEEEEEEEE-TTEECH
T ss_pred CChHHHHHHHHHHHHhcCCCEEEEEeccccccchhhhcccccccccccccchhHHHHHHHHHCCEEEEEcCcc-ccCccH
Confidence 356667777788888888999999998875110 10 12234455677666554433 577777
Q ss_pred HHHHHHcC
Q 020510 308 EIWCAFFP 315 (325)
Q Consensus 308 ~v~~~l~~ 315 (325)
.+..++-.
T Consensus 96 ~lk~~ld~ 103 (211)
T 1ydg_A 96 QMRAFIDT 103 (211)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHH
Confidence 77776643
No 108
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=49.26 E-value=32 Score=28.19 Aligned_cols=68 Identities=12% Similarity=0.129 Sum_probs=44.3
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCC--------------CHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHH
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPL--------------DRSTINASVRKTNRLVTVEEGFPQHGVGAEIWC 311 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~--------------d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~ 311 (325)
+|.+-..|..+++.|++.|.+++++++....|. +.+.+ +.+..++.||+.=--+ .|++...+..
T Consensus 14 ~g~T~~la~~i~~~l~~~g~~v~~~~l~~~~~~~~~~~~~~~~~d~~~~~~~-~~l~~aD~ii~gsP~y-~~~~~~~lk~ 91 (199)
T 2zki_A 14 YGSIVELAKEIGKGAEEAGAEVKIRRVRETLPPEFQSRIPFDKVKDIPEVTL-DDMRWADGFAIGSPTR-YGNMAGGLKT 91 (199)
T ss_dssp SSHHHHHHHHHHHHHHHHSCEEEEEECCCCSCGGGGTTCCGGGSTTSCBCCH-HHHHHCSEEEEEEECB-TTBCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHhCCCEEEEEehhHhCChhhhhccCCCcccccccccH-HHHHhCCEEEEECCcc-ccCccHHHHH
Confidence 466666777778888888999999999875111 01112 3455677666655544 5888888877
Q ss_pred HHcC
Q 020510 312 AFFP 315 (325)
Q Consensus 312 ~l~~ 315 (325)
++-.
T Consensus 92 ~ld~ 95 (199)
T 2zki_A 92 FLDT 95 (199)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 7643
No 109
>3kom_A Transketolase; rossmann fold, csgid, transferase, structural genomics, center for structural genomics of infectious DISE; HET: MSE; 1.60A {Francisella tularensis subsp}
Probab=48.79 E-value=53 Score=33.17 Aligned_cols=85 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred eeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeC-CCCCCCCCCC---cchHHHHHHhcCCCcEEEe
Q 020510 109 KPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGP-NGAAAGVGAQ---HSHCYAAWYASVPGLKVLS 180 (325)
Q Consensus 109 ~p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~-~G~~~g~G~t---Hs~~~~a~~~~iP~~~V~~ 180 (325)
+.++++. .+. ++ -.++.+.. ++. .++| ++++.. ++... .+.+ ....+...+++. |+.++-
T Consensus 149 ~~v~~i~-GDG~l~eG~~~Eal~~-A~~--------~~L~~livi~dnN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~ 216 (663)
T 3kom_A 149 HHTYVFL-GDGCLMEGVSHEACSL-AGT--------LGLNKLVAFWDDNNISI-DGDTKGWFSDNTPERFRAY-GWHVIE 216 (663)
T ss_dssp CCEEEEE-CHHHHHSHHHHHHHHH-HHH--------HTCTTEEEEEEECC------CGGGTCCCCHHHHHHHT-TCEEEE
T ss_pred CeEEEEE-CchhhhhchHHHHHHH-HHH--------hCCCeEEEEEECCCccc-ccchhhhcchhHHHHHHHC-CCeEEE
Confidence 4455454 554 33 45666643 453 4666 444433 33321 1222 222345777777 888773
Q ss_pred e---CCHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 181 P---YSSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 181 P---~d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
+ .|..++...++.+.+ .++|++|..
T Consensus 217 ~vdG~d~~~l~~al~~A~~~~~~P~lI~~ 245 (663)
T 3kom_A 217 NVDGHDFVAIEKAINEAHSQQQKPTLICC 245 (663)
T ss_dssp EEETTCHHHHHHHHHHHHHCSSSCEEEEE
T ss_pred EEcCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3 378999999999988 588999864
No 110
>3hh1_A Tetrapyrrole methylase family protein; chlorobium tepidum, structural genom 2, protein structure initiative; 1.85A {Chlorobaculum tepidum}
Probab=47.96 E-value=9.2 Score=29.33 Aligned_cols=35 Identities=20% Similarity=0.290 Sum_probs=26.3
Q ss_pred eeCCcEEEEE-ech--hHHHHHHHHHHHHhcCCcEEEE
Q 020510 236 REGKDVTITA-FSK--IVGLSLKAAEILAKEGISAEVI 270 (325)
Q Consensus 236 ~~G~dv~Iia-~G~--~~~~a~~Aa~~L~~~Gi~~~Vi 270 (325)
++|+++++++ .|. ++....+.++.+++.|+++++|
T Consensus 77 ~~G~~V~~l~d~GdP~i~~~~~~l~~~~~~~gi~v~vi 114 (117)
T 3hh1_A 77 EEGSDVALVTDAGTPAISDPGYTMASAAHAAGLPVVPV 114 (117)
T ss_dssp HTTCCEEEEEETTSCGGGSTTHHHHHHHHHTTCCEEEE
T ss_pred HCCCeEEEEecCCcCeEeccHHHHHHHHHHCCCcEEEe
Confidence 5688999999 673 3455666667777789999886
No 111
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=47.89 E-value=31 Score=26.79 Aligned_cols=62 Identities=10% Similarity=0.116 Sum_probs=37.4
Q ss_pred echhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHh-CCCeEEEEecCCCC--CCHHHHHHHHHc
Q 020510 246 FSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-KTNRLVTVEEGFPQ--HGVGAEIWCAFF 314 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~-~~~~vvvvEe~~~~--GGlg~~v~~~l~ 314 (325)
+|.+-..|...++.|++.|++++++++....+-+ +. +++.|++.=--+-. |.+-..+..++.
T Consensus 12 tGnT~~~A~~ia~~l~~~g~~v~~~~~~~~~~~~-------l~~~~d~ii~g~pty~~~~G~~p~~~~~fl~ 76 (148)
T 3f6r_A 12 TGNTESIAQKLEELIAAGGHEVTLLNAADASAEN-------LADGYDAVLFGCSAWGMEDLEMQDDFLSLFE 76 (148)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEEEETTTBCCTT-------TTTTCSEEEEEECEECSSSCEECHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHhCCCeEEEEehhhCCHhH-------hcccCCEEEEEecccCCCCCCCcHHHHHHHH
Confidence 3555666777777777789999999887654322 22 55555555333322 455556666654
No 112
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=47.32 E-value=55 Score=32.00 Aligned_cols=111 Identities=13% Similarity=0.089 Sum_probs=62.6
Q ss_pred CCceeech-hhH-HHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEE--eCCCCC-
Q 020510 83 PERVLDTP-ITE-AGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFR--GPNGAA- 155 (325)
Q Consensus 83 p~R~i~~G-IaE-~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G~~- 155 (325)
|.+|+..+ ..- -..+++|.|+|++. -++++++. .+. ++..+..+-+ ++. .++|++++ ..++..
T Consensus 426 ~~~~~~~~g~g~mG~~l~~AiGaa~a~~~~~vv~i~-GDG~~~~~~~~L~~-a~~--------~~l~~~ivv~NN~~~~~ 495 (573)
T 2iht_A 426 PFGFLTSAGCSSFGYGIPAAIGAQMARPDQPTFLIA-GDGGFHSNSSDLET-IAR--------LNLPIVTVVVNNDTNGL 495 (573)
T ss_dssp TTSEECCSSSCCTTCHHHHHHHHHHHSTTSCEEEEE-EHHHHHHTGGGHHH-HHH--------HTCCCEEEEEECSBCHH
T ss_pred CCeEEcCCCCcccccHHHHHHHHHHhCCCCcEEEEE-ccHHHHhHHHHHHH-HHH--------hCCCeEEEEEECCcchh
Confidence 66788642 111 23567888888763 35555554 443 2333443322 332 35665443 332222
Q ss_pred -CC---------CC--CCcc-hHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 156 -AG---------VG--AQHS-HCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 156 -~g---------~G--~tHs-~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
.. .+ .... -.+..+.... |+..+...+.+|+...++.+++.++|++|-
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~~l~~al~~a~~~~gp~lie 556 (573)
T 2iht_A 496 IELYQNIGHHRSHDPAVKFGGVDFVALAEAN-GVDATRATNREELLAALRKGAELGRPFLIE 556 (573)
T ss_dssp HHHHHHHHHSSCCGGGTBCCCCCHHHHHHHT-TCEEEECCSHHHHHHHHHHHHTSSSCEEEE
T ss_pred hHHHHHHhcCCCcCccccCCCCCHHHHHHHc-CCeEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 10 01 0000 1234566666 777888899999999999999888999884
No 113
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=47.28 E-value=45 Score=32.39 Aligned_cols=111 Identities=10% Similarity=0.035 Sum_probs=59.5
Q ss_pred CCceeechh--hHHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC
Q 020510 83 PERVLDTPI--TEAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (325)
Q Consensus 83 p~R~i~~GI--aE~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (325)
|.+|+..+- +=-..+++|.|+|++. -++++++. .+. ++..+..+-+ ++. .++|++++. .++...
T Consensus 398 ~~~~~~~~~~g~mG~~l~~A~G~a~a~~~~~vv~~~-GDG~~~~~~~el~t-a~~--------~~l~~~ivv~nN~~~~~ 467 (552)
T 1ovm_A 398 DVNFIVQPLWGSIGYTLAAAFGAQTACPNRRVIVLT-GDGAAQLTIQELGS-MLR--------DKQHPIILVLNNEGYTV 467 (552)
T ss_dssp SCEEECCTTTCCTTHHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHTTHHHH-HHH--------TTCCCEEEEEESSSCHH
T ss_pred CCeEEechhhHhhhhHHHHHHHHHHhCCCCcEEEEE-CchHHHhHHHHHHH-HHH--------hCCCCEEEEEECCCCeE
Confidence 455664221 1123457777777653 35555554 443 2333444433 333 356654443 323221
Q ss_pred C---CCCC------cchHHHHHHhcCCCc----EEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 G---VGAQ------HSHCYAAWYASVPGL----KVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 g---~G~t------Hs~~~~a~~~~iP~~----~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
. .|.. |.-.+..+.... |+ ..+...+.+|+...++.+++.++|++|-
T Consensus 468 ~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~~~~~v~~~~~l~~al~~a~~~~gp~lie 527 (552)
T 1ovm_A 468 ERAIHGAEQRYNDIALWNWTHIPQAL-SLDPQSECWRVSEAEQLADVLEKVAHHERLSLIE 527 (552)
T ss_dssp HHHHSCTTCGGGCCCCCCGGGSTTTS-CSSCCEEEEEECBHHHHHHHHHHHTTCSSEEEEE
T ss_pred EEeeccCCCCcccCCCCCHHHHHHHh-CCCcCCCEEEeCCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 1111 111222444444 66 7778889999999999998888898884
No 114
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=47.07 E-value=29 Score=26.34 Aligned_cols=44 Identities=7% Similarity=0.126 Sum_probs=28.1
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEe
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVE 297 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvE 297 (325)
|..-..|...++.|++.|++++++++... |.+. +.+++.|++.=
T Consensus 11 GnT~~~a~~i~~~l~~~g~~v~~~~~~~~---~~~~----l~~~d~vi~g~ 54 (137)
T 2fz5_A 11 GNTEAMANEIEAAVKAAGADVESVRFEDT---NVDD----VASKDVILLGC 54 (137)
T ss_dssp SHHHHHHHHHHHHHHHTTCCEEEEETTSC---CHHH----HHTCSEEEEEC
T ss_pred ChHHHHHHHHHHHHHhCCCeEEEEEcccC---CHHH----HhcCCEEEEEc
Confidence 55556666777777777999999886543 3332 34566655553
No 115
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=46.99 E-value=25 Score=28.24 Aligned_cols=50 Identities=4% Similarity=-0.065 Sum_probs=37.0
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccC-CCHHHHHHH
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRP-LDRSTINAS 286 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P-~d~~~l~~~ 286 (325)
+..++++||-|+.....+..++.|.+.|.++.++..++-.- +-.+.|.+.
T Consensus 22 ~~~~~llIaGG~GItPl~sm~~~l~~~~~~v~l~g~r~~~d~~~~~el~~l 72 (158)
T 3lrx_A 22 KFGKILAIGAYTGIVEVYPIAKAWQEIGNDVTTLHVTFEPMVILKEELEKA 72 (158)
T ss_dssp CCSEEEEEEETTHHHHHHHHHHHHHHHTCEEEEEEECBGGGCCSHHHHHHH
T ss_pred CCCeEEEEEccCcHHHHHHHHHHHHhcCCcEEEEEeCCHHHhhHHHHHHHH
Confidence 35689999999999999999999887787888885555432 234556553
No 116
>1itz_A Transketolase; calvin cycle, cofactor, thiamine pyrophosphate, plant, transferase; HET: TPP; 2.30A {Zea mays} SCOP: c.36.1.6 c.36.1.10 c.48.1.1
Probab=46.81 E-value=69 Score=32.31 Aligned_cols=85 Identities=11% Similarity=0.065 Sum_probs=49.2
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccC-CEEEEeCC-CCC--CCCCCCcchHHHHHHhcCCCcEEEee-
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISV-PIVFRGPN-GAA--AGVGAQHSHCYAAWYASVPGLKVLSP- 181 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~-pvv~~~~~-G~~--~g~G~tHs~~~~a~~~~iP~~~V~~P- 181 (325)
.++++. .+. ++ -.++.+.. ++. .++ +++++..+ +.. ...+......+...+++. |+.++.+
T Consensus 161 ~v~~i~-GDG~~~eG~~~Eal~~-A~~--------~~L~~li~i~~nN~~~i~~~~~~~~~~d~~~~~~a~-G~~~~~~v 229 (675)
T 1itz_A 161 YTYVIL-GDGCQMEGIANEACSL-AGH--------WGLGKLIAFYDDNHISIDGDTEIAFTEDVSTRFEAL-GWHTIWVK 229 (675)
T ss_dssp CEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEETTEEGGGTCCSCHHHHHHHT-TCEEEEES
T ss_pred EEEEEE-CHhHhchhHHHHHHHH-HHH--------hCCCcEEEEEECCCccCCCChhhhcChhHHHHHHhC-CCEEEEEe
Confidence 444454 554 44 46676643 453 355 45555433 322 111111122344677777 8888834
Q ss_pred C---CHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 182 Y---SSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 182 ~---d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
. |..++..+++.+.+ .++|++|..
T Consensus 230 dG~~d~~~l~~al~~a~~~~~~P~lI~~ 257 (675)
T 1itz_A 230 NGNTGYDDIRAAIKEAKAVTDKPTLIKV 257 (675)
T ss_dssp CTTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHCCCCeEEEEE
Confidence 3 78899999999887 578998864
No 117
>3fvw_A Putative NAD(P)H-dependent FMN reductase; Q8DWD8_strmu, SMR99, NESG, structural genomics, PSI-2, protein structure initiative; 2.30A {Streptococcus mutans}
Probab=46.71 E-value=41 Score=27.79 Aligned_cols=62 Identities=8% Similarity=0.142 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeeeccCCC----------HHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 250 VGLSLKAAEILAKEGISAEVINLRSIRPLD----------RSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d----------~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
...+..+++.++ .|.+++++|+..+..++ .+.+.+.+...+.||+.---+ .+++...+..++
T Consensus 19 ~~la~~~~~~~~-~~~~v~~~dl~~lp~~~~~~~~~~~~~~~~~~~~i~~AD~iV~~sP~y-~~~~p~~lK~~i 90 (192)
T 3fvw_A 19 RQLAKKAETIIG-DRAQVSYLSYDRVPFFNQDLETSVHPEVAHAREEVQEADAIWIFSPVY-NYAIPGPVKNLL 90 (192)
T ss_dssp HHHHHHHHHHHT-TSSEEEECCCSSCCCCCGGGTTSCCHHHHHHHHHHHHCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHhcC-CCCEEEEEeCccCCCCCcccccCCcHHHHHHHHHHHhCCEEEEECccc-ccCCCHHHHHHH
Confidence 344555566665 68999999998753232 234667787888777765544 577766665444
No 118
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=45.78 E-value=61 Score=24.70 Aligned_cols=32 Identities=6% Similarity=0.046 Sum_probs=23.9
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
...++|+++|.+ ....++.|.++|.++.++|.
T Consensus 6 ~~~v~I~G~G~i---G~~la~~L~~~g~~V~~id~ 37 (141)
T 3llv_A 6 RYEYIVIGSEAA---GVGLVRELTAAGKKVLAVDK 37 (141)
T ss_dssp CCSEEEECCSHH---HHHHHHHHHHTTCCEEEEES
T ss_pred CCEEEEECCCHH---HHHHHHHHHHCCCeEEEEEC
Confidence 356888888874 34456778888999999885
No 119
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=45.14 E-value=58 Score=26.84 Aligned_cols=126 Identities=15% Similarity=0.014 Sum_probs=66.9
Q ss_pred CHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCcccc----CCceEEeeeCCcEEEEEechhHHHHHHHHH
Q 020510 183 SSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLP----IGKAKIEREGKDVTITAFSKIVGLSLKAAE 258 (325)
Q Consensus 183 d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~----~gk~~vl~~G~dv~Iia~G~~~~~a~~Aa~ 258 (325)
+-+++.+++-+|+..++-+|+.-...... ...+......+++ +-....++++.-+.|++....-..+.+.|.
T Consensus 23 ~I~~AA~llaqai~~~g~IyvfG~Ghs~~----~~~e~~~~~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~ 98 (170)
T 3jx9_A 23 ELFDVVRLLAQALVGQGKVYLDAYGEFEG----LYPMLSDGPDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLA 98 (170)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECGGGGG----GTHHHHTSTTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCCcHHH----HHHHHHcccCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHH
Confidence 45678889999999999999973321100 0000000000000 000113355555555665555567899999
Q ss_pred HHHhcCCcEEEEEeeeccCCCHH--HHHHHHhCC-CeEEEEecCCCCCCHHHHHHHHHc
Q 020510 259 ILAKEGISAEVINLRSIRPLDRS--TINASVRKT-NRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 259 ~L~~~Gi~~~Vi~~~~l~P~d~~--~l~~~~~~~-~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
.++++|+++-.|.- ..+=+.. .|.+.+.+. +.++..||+...|..++..+.++.
T Consensus 99 ~ake~G~~vIaITs--~~~~~~~~~~L~d~an~~p~gll~~e~g~r~g~~Sti~~~~i~ 155 (170)
T 3jx9_A 99 RYDAWHTPYSIITL--GDVTETLERSIAPLALKFDKGLLPAEDGSRHGLPSLALGAFLL 155 (170)
T ss_dssp HHHHHTCCEEEEES--SCCCTTGGGSSSCEECCCCSCSEECTTSCEECCCHHHHHHHHH
T ss_pred HHHHCCCcEEEEeC--cchhccccCcHHHHHhCCCCCceECCCCCEechhHHHHHHHHH
Confidence 99999887666554 2221111 111212111 127888888877766655555543
No 120
>3f0i_A Arsenate reductase; structural genomics, IDP01300, vibrio CH center for structural genomics of infectious diseases, CSGI oxidoreductase; HET: MSE; 1.88A {Vibrio cholerae}
Probab=44.85 E-value=13 Score=28.76 Aligned_cols=44 Identities=14% Similarity=0.189 Sum_probs=36.8
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
-.....+.+|.+.|+++|++.+.+|+.. .|.+.+.|.+.+++.+
T Consensus 11 ~p~C~~c~ka~~~L~~~gi~~~~~di~~-~~~t~~eL~~~l~~~g 54 (119)
T 3f0i_A 11 NPKCSKSRETLALLENQGIAPQVIKYLE-TSPSVEELKRLYQQLG 54 (119)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEECHHH-HCCCHHHHHHHHHHHT
T ss_pred CCCChHHHHHHHHHHHcCCceEEEEecc-CcCcHHHHHHHHHHcC
Confidence 3556788999999999999999999876 6889998888887654
No 121
>1rtt_A Conserved hypothetical protein; protein structure initiative, SAD with sulfur, putative REDU PSI; 1.28A {Pseudomonas aeruginosa} SCOP: c.23.5.4 PDB: 1x77_A*
Probab=44.06 E-value=13 Score=30.62 Aligned_cols=61 Identities=13% Similarity=0.233 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeeeccCCC-----------HHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 251 GLSLKAAEILAKEGISAEVINLRSIRPLD-----------RSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 251 ~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d-----------~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
..+..+++.++ .|.+++++|+..+..++ .+.+.+.+..++.||+.=--+ .+++...+..++
T Consensus 24 ~la~~i~~~l~-~g~~v~~~dl~~~p~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~~sP~y-~~~~p~~lK~~i 95 (193)
T 1rtt_A 24 AALQEAIGLVP-PGMSIELADISGIPLYNEDVYALGFPPAVERFREQIRAADALLFATPEY-NYSMAGVLKNAI 95 (193)
T ss_dssp HHHHHHHTTCC-TTCEEEECCCTTCCCCCHHHHTTCCCHHHHHHHHHHHHCSEEEEECCEE-TTEECHHHHHHH
T ss_pred HHHHHHHHhcc-CCCeEEEEeHHHCCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcccc-ccCcCHHHHHHH
Confidence 34444444454 58899999988753332 234555677777766654433 566666665544
No 122
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=43.84 E-value=52 Score=32.10 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=24.0
Q ss_pred EEEeeCCHHHHHHHHHHhHhC-CCcEEEE
Q 020510 177 KVLSPYSSEDARGLLKAAIRD-PDPVVFL 204 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~-~~Pv~ir 204 (325)
..+...+.+|+...++.+++. ++|++|-
T Consensus 508 ~~~~v~~~~el~~al~~a~~~~~gp~lie 536 (568)
T 2wvg_A 508 KGLKAKTGGELAEAIKVALANTDGPTLIE 536 (568)
T ss_dssp EEEEESBHHHHHHHHHHHHHCCSSCEEEE
T ss_pred ceEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 566678999999999999987 8999884
No 123
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=42.93 E-value=41 Score=32.86 Aligned_cols=28 Identities=11% Similarity=0.121 Sum_probs=24.3
Q ss_pred EEEeeCCHHHHHHHHHHhHhC-CCcEEEE
Q 020510 177 KVLSPYSSEDARGLLKAAIRD-PDPVVFL 204 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~-~~Pv~ir 204 (325)
..+...+.+|+...++.+++. ++|++|-
T Consensus 500 ~~~~v~~~~el~~al~~a~~~~~gp~lie 528 (566)
T 2vbi_A 500 LGLKATTPKELTEAIARAKANTRGPTLIE 528 (566)
T ss_dssp EEEEECSHHHHHHHHHHHHHCCSSCEEEE
T ss_pred cEEEeCCHHHHHHHHHHHHhcCCCcEEEE
Confidence 566778999999999999987 8999884
No 124
>1cfz_A Hydrogenase 2 maturation protease; metzincins, nickel; 2.20A {Escherichia coli} SCOP: c.56.1.1 PDB: 2kml_A
Probab=42.21 E-value=52 Score=26.69 Aligned_cols=56 Identities=9% Similarity=0.226 Sum_probs=40.5
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhc-C--CcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecC
Q 020510 240 DVTITAFSKIV----GLSLKAAEILAKE-G--ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEG 299 (325)
Q Consensus 240 dv~Iia~G~~~----~~a~~Aa~~L~~~-G--i~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~ 299 (325)
+++|+++|+.+ .....+++.|+++ . -+++++|..+.- + +.+ ..+..+++++++|=-
T Consensus 2 ~ilVlGiGN~l~gDDG~G~~v~~~L~~~~~~p~~v~vid~gt~~-~--~l~-~~l~~~d~lIiVDA~ 64 (162)
T 1cfz_A 2 RILVLGVGNILLTDEAIGVRIVEALEQRYILPDYVEILDGGTAG-M--ELL-GDMANRDHLIIADAI 64 (162)
T ss_dssp CEEEEEESCTTBGGGGHHHHHHHHHHHHEECCTTEEEEEEETCC-G--GGH-HHHSSCSEEEEEEEC
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCCCCeEEEECCCCH-H--HHH-HHHhCCCEEEEEEeh
Confidence 47889999775 3566788888764 2 369999999963 3 333 457778899999853
No 125
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=42.09 E-value=67 Score=26.02 Aligned_cols=66 Identities=15% Similarity=0.111 Sum_probs=41.9
Q ss_pred chhHHHHHHHHHHHHhcC--CcEEEEEeeec--cCCCH------------------------HHHHHHHhCCCeEEEEec
Q 020510 247 SKIVGLSLKAAEILAKEG--ISAEVINLRSI--RPLDR------------------------STINASVRKTNRLVTVEE 298 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~G--i~~~Vi~~~~l--~P~d~------------------------~~l~~~~~~~~~vvvvEe 298 (325)
|.+...+..+++.|++.| .+++++|+... .+++. +.+.+.+..++.||+.=-
T Consensus 16 s~t~~la~~~~~~l~~~g~~~~v~~~dl~~~~~p~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~l~~aD~iv~~~P 95 (201)
T 1t5b_A 16 SQSGQLTDYFIEQWREKHVADEITVRDLAANPVPVLDGELVGAMRPGDAPLTPRQQDALALSDELIAELKAHDVIVIAAP 95 (201)
T ss_dssp CHHHHHHHHHHHHHHHHCTTCEEEEEETTTSCCCCCCHHHHHHTC--CCCCCHHHHHHHHHHHHHHHHHHHCSEEEEECC
T ss_pred ChHHHHHHHHHHHHHHhCCCCeEEEEeccCCCCCCCCHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEeC
Confidence 344455666777787765 89999998763 23321 234456667777766655
Q ss_pred CCCCCCHHHHHHHHH
Q 020510 299 GFPQHGVGAEIWCAF 313 (325)
Q Consensus 299 ~~~~GGlg~~v~~~l 313 (325)
-+ .+++...+..++
T Consensus 96 ~y-~~~~p~~lK~~i 109 (201)
T 1t5b_A 96 MY-NFNIPTQLKNYF 109 (201)
T ss_dssp CB-TTBCCHHHHHHH
T ss_pred cc-cCcCCHHHHHHH
Confidence 44 577777666554
No 126
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=41.50 E-value=8.2 Score=30.29 Aligned_cols=39 Identities=18% Similarity=0.244 Sum_probs=29.5
Q ss_pred eeeCCcEEEEEechhHH--HHHHHHHHHHhcCCcEEEEEee
Q 020510 235 EREGKDVTITAFSKIVG--LSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 235 l~~G~dv~Iia~G~~~~--~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
+.+..|++||++|.... .--+..+.|++.||.+++.|-.
T Consensus 58 l~~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m~T~ 98 (122)
T 2ab1_A 58 VEKGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVLQTE 98 (122)
T ss_dssp HTTCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEECHH
T ss_pred hhCCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEeCHH
Confidence 45568999999996654 3455667899999999997644
No 127
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=40.78 E-value=40 Score=26.09 Aligned_cols=30 Identities=17% Similarity=0.109 Sum_probs=21.4
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeecc
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIR 276 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~ 276 (325)
|..-..|...++.|++.|++++++++....
T Consensus 12 Gnt~~~a~~i~~~l~~~g~~v~~~~~~~~~ 41 (147)
T 1f4p_A 12 GNTEYTAETIARELADAGYEVDSRDAASVE 41 (147)
T ss_dssp SHHHHHHHHHHHHHHHHTCEEEEEEGGGCC
T ss_pred CHHHHHHHHHHHHHHhcCCeeEEEehhhCC
Confidence 455556666666777779999999887654
No 128
>2e85_A Hydrogenase 3 maturation protease; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2i8l_A
Probab=40.02 E-value=62 Score=26.18 Aligned_cols=55 Identities=20% Similarity=0.118 Sum_probs=38.4
Q ss_pred cEEEEEechhHH----HHHHHHHHHHhcC-CcEEEEEeeeccCCCHHHHHHHHh--CCCeEEEEec
Q 020510 240 DVTITAFSKIVG----LSLKAAEILAKEG-ISAEVINLRSIRPLDRSTINASVR--KTNRLVTVEE 298 (325)
Q Consensus 240 dv~Iia~G~~~~----~a~~Aa~~L~~~G-i~~~Vi~~~~l~P~d~~~l~~~~~--~~~~vvvvEe 298 (325)
+++|+++|+.+. ....+++.|++.. -+++++|..+.-+ +.+. .+. +.++++++|=
T Consensus 5 ~~lVlGiGN~l~gDDG~G~~v~~~L~~~~~~~v~vid~gt~~~---~l~~-~l~~~~~d~lIiVDA 66 (159)
T 2e85_A 5 TDVLLCVGNSMMGDDGAGPLLAEKCAAAPKGNWVVIDGGSAPE---NDIV-AIRELRPTRLLIVDA 66 (159)
T ss_dssp CEEEEEECCGGGGGGGHHHHHHHHHHHSCCTTCEEEECTTCSG---GGHH-HHHHHCCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHhhhCCCCeEEEECCCCHH---HHHH-HHhcCCCCEEEEEEe
Confidence 468899998762 5677888888753 3589999998743 3332 333 4688999985
No 129
>3rim_A Transketolase, TK; TPP, transferase; HET: TPP; 2.49A {Mycobacterium tuberculosis}
Probab=39.59 E-value=74 Score=32.34 Aligned_cols=85 Identities=11% Similarity=-0.050 Sum_probs=48.7
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeCC-CCCC--CCCCCcchHHHHHHhcCCCcEEEee-
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGPN-GAAA--GVGAQHSHCYAAWYASVPGLKVLSP- 181 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~~-G~~~--g~G~tHs~~~~a~~~~iP~~~V~~P- 181 (325)
.+++.. .+. ++ .++|.+.. ++. .++| ++++..+ +... ....+....+...+++. |+.++..
T Consensus 170 ~v~~~~-GDG~l~eG~~~EAl~~-A~~--------~~L~nli~i~d~N~~si~~~~~~~~~~~~~~~~~a~-G~~~~~V~ 238 (700)
T 3rim_A 170 YIYVIA-SDGDIEEGVTSEASSL-AAV--------QQLGNLIVFYDRNQISIEDDTNIALCEDTAARYRAY-GWHVQEVE 238 (700)
T ss_dssp CEEEEE-EHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEETTEEGGGTCCCCHHHHHHHH-TCEEEEEE
T ss_pred eEEEEE-CCcccccChHHHHHHH-HHH--------cCCCcEEEEEECCCcccccchhhccchhHHHHHHHc-CCeEEEEC
Confidence 344343 554 33 44666533 453 4676 6655432 3221 11112222334566665 7777765
Q ss_pred --CCHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 182 --YSSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 182 --~d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
.|..++...++.+.+ .++|++|..
T Consensus 239 DG~D~~al~~Al~~A~~~~~~P~lI~~ 265 (700)
T 3rim_A 239 GGENVVGIEEAIANAQAVTDRPSFIAL 265 (700)
T ss_dssp CTTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCCEEEEE
Confidence 588899999999887 578999864
No 130
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=39.55 E-value=49 Score=26.97 Aligned_cols=61 Identities=13% Similarity=-0.014 Sum_probs=36.9
Q ss_pred echhHHHHHHHHHHHHh-cCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHc
Q 020510 246 FSKIVGLSLKAAEILAK-EGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~-~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
+|..-..|..+++.|++ .|++++++++... +.+. +.+++.||+.=--+ .|++...+..++.
T Consensus 15 ~GnT~~~a~~i~~~l~~~~g~~v~~~~l~~~---~~~~----l~~aD~ii~gsP~y-~g~~~~~lk~fld 76 (188)
T 2ark_A 15 TGNTKKMAELVAEGARSLEGTEVRLKHVDEA---TKED----VLWADGLAVGSPTN-MGLVSWKMKRFFD 76 (188)
T ss_dssp SSHHHHHHHHHHHHHHTSTTEEEEEEETTTC---CHHH----HHHCSEEEEEEECB-TTBCCHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHhhcCCCeEEEEEhhhC---CHHH----HHhCCEEEEEeCcc-CCcCCHHHHHHHH
Confidence 35555667777778887 7888998887654 3222 33455555444433 5666666655553
No 131
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=39.38 E-value=13 Score=36.70 Aligned_cols=111 Identities=15% Similarity=0.083 Sum_probs=60.9
Q ss_pred CCceeec-hhh-HHHHHHHHHHHhccC-CeeEEecccccH-HHHHHHHHHHHHhhccccCCCCccCCEEEEe--CCCCCC
Q 020510 83 PERVLDT-PIT-EAGFTGIGVGAAYYG-LKPVVEFMTFNF-SMQAIDHIINSAAKSNYMSSGQISVPIVFRG--PNGAAA 156 (325)
Q Consensus 83 p~R~i~~-GIa-E~~~vg~A~GlA~~G-~~p~v~~~~~~f-~~ra~dqi~~~~a~~~~~~~~~~~~pvv~~~--~~G~~~ 156 (325)
|.+|+.. |-. =-..+++|.|+|++. -++++++. .+. ++..++.+.+ ++. .++|++++. .++...
T Consensus 414 ~~~~~~~~g~g~mG~~l~~AiGaala~~~~~vv~i~-GDG~~~~~~~~L~t-a~~--------~~l~~~ivv~nN~~~~~ 483 (589)
T 2pgn_A 414 PRRLVTSMAEGILGCGFPMALGAQLAEPNSRVFLGT-GDGALYYHFNEFRV-AVE--------HKLPVITMVFTNESYGA 483 (589)
T ss_dssp TTCEESCTTTCCTTCHHHHHHHHHHHCTTSCEEEEE-EHHHHHHHGGGHHH-HHH--------TTCCCEEEEEECSBCHH
T ss_pred CCcEECCCCcchhhhHHHHHHHHHHhCCCCcEEEEE-eeHHHHhhHHHHHH-HHH--------hCCCeEEEEEECCCccc
Confidence 6678764 211 123567788887663 35555554 443 2333444432 333 356654443 222210
Q ss_pred -C-C-----CC---Cc--chHHHHHHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEE
Q 020510 157 -G-V-----GA---QH--SHCYAAWYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 157 -g-~-----G~---tH--s~~~~a~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
+ . +. +. .-.+..+.+.. |+..+...+.+|+...++.+++.++|++|-
T Consensus 484 ~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~el~~al~~a~~~~gp~lie 542 (589)
T 2pgn_A 484 NWTLMNHQFGQNNWTEFMNPDWVGIAKAF-GAYGESVRETGDIAGALQRAIDSGKPALIE 542 (589)
T ss_dssp HHHHHHHHHSSCCSCBCCCCCHHHHHHHH-TCEEEECTTTCCHHHHHHHHHHHCSCEEEE
T ss_pred chHHHHhhcCCCccccCCCCCHHHHHHHC-CCeEEEECCHHHHHHHHHHHHhCCCCEEEE
Confidence 0 0 00 11 01233455554 667777889999999999999888999885
No 132
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=39.05 E-value=69 Score=31.26 Aligned_cols=27 Identities=7% Similarity=-0.121 Sum_probs=22.0
Q ss_pred EEeeCCHHHHHHHHHHh-HhCCCcEEEE
Q 020510 178 VLSPYSSEDARGLLKAA-IRDPDPVVFL 204 (325)
Q Consensus 178 V~~P~d~~e~~~~l~~a-~~~~~Pv~ir 204 (325)
.+...+.+|+...++.+ .+.++|++|-
T Consensus 519 ~~~v~~~~el~~al~~a~~~~~~p~lie 546 (570)
T 2vbf_A 519 SKIVRTENEFVSVMKEAQADVNRMYWIE 546 (570)
T ss_dssp EEEECBHHHHHHHHHHHHHCTTSEEEEE
T ss_pred eEEecCHHHHHHHHHHHHhcCCCcEEEE
Confidence 56678999999999984 6677899884
No 133
>3nzn_A Glutaredoxin; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics, rossmann fold; 1.10A {Methanosarcina mazei}
Probab=38.55 E-value=31 Score=25.20 Aligned_cols=68 Identities=10% Similarity=0.117 Sum_probs=42.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHh-----CCCeEEEEecCCCCCCHHH
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR-----KTNRLVTVEEGFPQHGVGA 307 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~-----~~~~vvvvEe~~~~GGlg~ 307 (325)
.+++|.+ -+....+.+|...|++.|++.+.+++....+-+.+.+.+.++ .+-.+++++++...||+..
T Consensus 22 ~~v~ly~-~~~Cp~C~~ak~~L~~~~i~y~~vdI~~~~~~~~~~~~~~l~~~~g~~~vP~l~i~~~~~igg~~~ 94 (103)
T 3nzn_A 22 GKVIMYG-LSTCVWCKKTKKLLTDLGVDFDYVYVDRLEGKEEEEAVEEVRRFNPSVSFPTTIINDEKAIVGFKE 94 (103)
T ss_dssp SCEEEEE-CSSCHHHHHHHHHHHHHTBCEEEEEGGGCCHHHHHHHHHHHHHHCTTCCSCEEEETTTEEEESCCH
T ss_pred CeEEEEc-CCCCchHHHHHHHHHHcCCCcEEEEeeccCcccHHHHHHHHHHhCCCCccCEEEECCCEEEEcCCH
Confidence 3566654 456678888989999999999999987653322223332222 1123566766355688754
No 134
>1fov_A Glutaredoxin 3, GRX3; active site disulfide, CIS Pro 53, electron transport; NMR {Escherichia coli} SCOP: c.47.1.1 PDB: 3grx_A*
Probab=37.87 E-value=61 Score=21.83 Aligned_cols=70 Identities=13% Similarity=0.211 Sum_probs=39.4
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC-eEEEEecCCCCCCHHHHHHHHHc
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN-RLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~-~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
+++.+ -.....+.++...|++.|++...+|+.. .|-..+.+.+...... .++++ ++...||+ +.|.+++.
T Consensus 3 i~~y~-~~~C~~C~~~~~~l~~~~i~~~~~~i~~-~~~~~~~~~~~~~~~~vP~l~~-~g~~i~g~-~~i~~~~~ 73 (82)
T 1fov_A 3 VEIYT-KETCPYCHRAKALLSSKGVSFQELPIDG-NAAKREEMIKRSGRTTVPQIFI-DAQHIGGY-DDLYALDA 73 (82)
T ss_dssp EEEEE-CSSCHHHHHHHHHHHHHTCCCEEEECTT-CSHHHHHHHHHHSSCCSCEEEE-TTEEEESH-HHHHHHHH
T ss_pred EEEEE-CCCChhHHHHHHHHHHCCCCcEEEECCC-CHHHHHHHHHHhCCCCcCEEEE-CCEEEeCH-HHHHHHHH
Confidence 44543 3445667778888888899999998863 1111122333222221 24444 55567776 45666554
No 135
>3tem_A Ribosyldihydronicotinamide dehydrogenase [quinone; oxidoreductase-oxidoreductase inhibitor complex; HET: FAD 6A1 IMD; 1.45A {Homo sapiens} SCOP: c.23.5.3 PDB: 3te7_A* 3tzb_A* 3fw1_A* 2qwx_A* 1zx1_A* 3g5m_A* 3gam_A* 3ovm_A* 3owh_A* 3owx_A* 3ox1_A* 3ox2_A* 3ox3_A* 1sg0_A* 1qr2_A* 1xi2_A* 2qmy_A* 2qmz_A* 2qr2_A* 2qx4_A* ...
Probab=37.86 E-value=49 Score=28.32 Aligned_cols=64 Identities=17% Similarity=0.151 Sum_probs=41.6
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEeeecc--CC-------------------------------CH--HHHHHHHhCCCeE
Q 020510 249 IVGLSLKAAEILAKEGISAEVINLRSIR--PL-------------------------------DR--STINASVRKTNRL 293 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~--P~-------------------------------d~--~~l~~~~~~~~~v 293 (325)
....+..+++.|++.|.+++++|+.... |. +. ..+.+.++..+.|
T Consensus 17 t~~l~~~~~~~l~~~g~ev~~~dL~~~~~~P~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~dd~~~~~~~l~~aD~i 96 (228)
T 3tem_A 17 NGSLKNVAVDELSRQGCTVTVSDLYAMNFEPRATDKDITGTLSNPEVFNYGVETHEAYKQRSLASDITDEQKKVREADLV 96 (228)
T ss_dssp HHHHHHHHHHHHHHHTCEEEEEETTTTTCCCCCCGGGBCSCCSCTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEhhhcCCcccCCHHHHhhhccccccccchhhhhhhhhcCCCcHHHHHHHHHHHhCCEE
Confidence 4456667778888889999999997643 32 12 2344456677776
Q ss_pred EEEecCCCCCCHHHHHHHHH
Q 020510 294 VTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 294 vvvEe~~~~GGlg~~v~~~l 313 (325)
|+.=--+ .+++-..+..++
T Consensus 97 v~~~P~y-~~~~p~~lK~~i 115 (228)
T 3tem_A 97 IFQFPLY-WFSVPAILKGWM 115 (228)
T ss_dssp EEEEECB-TTBCCHHHHHHH
T ss_pred EEECChh-hcccCHHHHHHH
Confidence 6665544 577777666554
No 136
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=37.66 E-value=23 Score=27.24 Aligned_cols=64 Identities=16% Similarity=0.188 Sum_probs=42.6
Q ss_pred CCcEEEEEech----hHHHHHHHHHHHHhcCCc---EEEEEeeeccCCCHHHHHHHHh-----CCCeEEEEecCCCCCCH
Q 020510 238 GKDVTITAFSK----IVGLSLKAAEILAKEGIS---AEVINLRSIRPLDRSTINASVR-----KTNRLVTVEEGFPQHGV 305 (325)
Q Consensus 238 G~dv~Iia~G~----~~~~a~~Aa~~L~~~Gi~---~~Vi~~~~l~P~d~~~l~~~~~-----~~~~vvvvEe~~~~GGl 305 (325)
..+++|++.++ ....+.+|.+.|++.|++ ...+|+.. |.+. .+.++ .+-..|++... ..||+
T Consensus 15 ~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~gv~~~~~~~~dv~~----~~~~-~~~l~~~sg~~tvP~vfI~g~-~iGG~ 88 (121)
T 3gx8_A 15 SAPVVLFMKGTPEFPKCGFSRATIGLLGNQGVDPAKFAAYNVLE----DPEL-REGIKEFSEWPTIPQLYVNKE-FIGGC 88 (121)
T ss_dssp SCSEEEEESBCSSSBCTTHHHHHHHHHHHHTBCGGGEEEEECTT----CHHH-HHHHHHHHTCCSSCEEEETTE-EEESH
T ss_pred cCCEEEEEeccCCCCCCccHHHHHHHHHHcCCCcceEEEEEecC----CHHH-HHHHHHHhCCCCCCeEEECCE-EEecH
Confidence 45788888883 777888999999999998 88888752 3333 22332 22235666554 46887
Q ss_pred HH
Q 020510 306 GA 307 (325)
Q Consensus 306 g~ 307 (325)
..
T Consensus 89 d~ 90 (121)
T 3gx8_A 89 DV 90 (121)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 137
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=37.03 E-value=73 Score=26.18 Aligned_cols=65 Identities=8% Similarity=0.087 Sum_probs=42.0
Q ss_pred hhHHHHHHHHHHHHhcC--CcEEEEEee--ec--cCCCHH-----------------------------HHHHHHhCCCe
Q 020510 248 KIVGLSLKAAEILAKEG--ISAEVINLR--SI--RPLDRS-----------------------------TINASVRKTNR 292 (325)
Q Consensus 248 ~~~~~a~~Aa~~L~~~G--i~~~Vi~~~--~l--~P~d~~-----------------------------~l~~~~~~~~~ 292 (325)
.....+..+++.|++.| .+++++|+. .. .+++.+ .+.+.+...+.
T Consensus 18 ~t~~la~~~~~~~~~~g~~~~v~~~dL~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~aD~ 97 (208)
T 2hpv_A 18 RSVRALETFLASYRETNPSDEIEILDVYAPETNMPEIDEELLSAWGALRAGAAFETLSENQQQKVARFNELTDQFLSADK 97 (208)
T ss_dssp HHHHHHHHHHHHHHHHCTTSEEEEEETTCGGGCCCCCCHHHHHHHHHHHHTCCGGGSCHHHHHHHHHHHHHHHHHHHCSE
T ss_pred HHHHHHHHHHHHHHHhCCCCeEEEeeCCcccCCCCcCCHHHHHhhcCcccccccccCCHHHHhhHHHHHHHHHHHHhCCE
Confidence 34455666777888776 999999998 64 344322 24445667777
Q ss_pred EEEEecCCCCCCHHHHHHHHH
Q 020510 293 LVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 293 vvvvEe~~~~GGlg~~v~~~l 313 (325)
||+.=--+ .+++...+..++
T Consensus 98 iv~~~P~y-~~~~pa~lK~~i 117 (208)
T 2hpv_A 98 VVIANPMW-NLNVPTRLKAWV 117 (208)
T ss_dssp EEEEEECB-TTBCCHHHHHHH
T ss_pred EEEEeccc-cCCCCHHHHHHH
Confidence 66665544 577777776555
No 138
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=36.94 E-value=1.6e+02 Score=27.13 Aligned_cols=69 Identities=10% Similarity=0.106 Sum_probs=43.7
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee---------------ccCCCHHHHHHHHhCCCeEEEEecCCCC
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS---------------IRPLDRSTINASVRKTNRLVTVEEGFPQ 302 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~---------------l~P~d~~~l~~~~~~~~~vvvvEe~~~~ 302 (325)
+..+.|++.|.......++ +++.|+++-++| .. ....|.+.|.+++++.+ ++|.|-...
T Consensus 24 ~~~I~ilGgG~lg~~l~~a---a~~lG~~v~~~d-~~~~p~~~~ad~~~~~~~~~~d~~~l~~~a~~~d-~i~~e~e~~- 97 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVES---ANRLNIQVNVLD-ADNSPAKQISAHDGHVTGSFKEREAVRQLAKTCD-VVTAEIEHV- 97 (403)
T ss_dssp CCEEEEECCSHHHHHHHHH---HHHHTCEEEEEE-STTCTTGGGCCSSCCEESCTTCHHHHHHHHTTCS-EEEESSSCS-
T ss_pred CCEEEEECCCHHHHHHHHH---HHHCCCEEEEEE-CCCCcHHHhccccceeecCCCCHHHHHHHHHhCC-EEEECCCCC-
Confidence 4678899888655555554 444599999998 32 12245678888887765 677763332
Q ss_pred CCHHHHHHHHHcC
Q 020510 303 HGVGAEIWCAFFP 315 (325)
Q Consensus 303 GGlg~~v~~~l~~ 315 (325)
...+.+.|.+
T Consensus 98 ---~~~~l~~l~~ 107 (403)
T 3k5i_A 98 ---DTYALEEVAS 107 (403)
T ss_dssp ---CHHHHHHHTT
T ss_pred ---CHHHHHHHHc
Confidence 3445555655
No 139
>2ct6_A SH3 domain-binding glutamic acid-rich-like protein 2; SH3BGRL2,FASH3, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.88 E-value=42 Score=25.11 Aligned_cols=62 Identities=6% Similarity=0.072 Sum_probs=37.5
Q ss_pred cEEEEEechhHHHHH------HHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC--------C----eEEEEecCCC
Q 020510 240 DVTITAFSKIVGLSL------KAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT--------N----RLVTVEEGFP 301 (325)
Q Consensus 240 dv~Iia~G~~~~~a~------~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~--------~----~vvvvEe~~~ 301 (325)
+++|.+. +....+. +|.+.|++.|++.+.+|+.. |.+...++.+.. + ..|++++..
T Consensus 9 ~V~vy~~-~~C~~C~~~~~~~~ak~~L~~~gi~y~~vdI~~----~~~~~~~l~~~~~~~~~~~~g~~tvP~vfi~g~~- 82 (111)
T 2ct6_A 9 VIRVFIA-SSSGFVAIKKKQQDVVRFLEANKIEFEEVDITM----SEEQRQWMYKNVPPEKKPTQGNPLPPQIFNGDRY- 82 (111)
T ss_dssp CEEEEEC-SSCSCHHHHHHHHHHHHHHHHTTCCEEEEETTT----CHHHHHHHHHSCCTTTCCSSSSCCSCEEEETTEE-
T ss_pred EEEEEEc-CCCCCcccchhHHHHHHHHHHcCCCEEEEECCC----CHHHHHHHHHHhcccccccCCCCCCCEEEECCEE-
Confidence 4556554 2333444 67888989999999999975 444333333332 1 356776654
Q ss_pred CCCHHH
Q 020510 302 QHGVGA 307 (325)
Q Consensus 302 ~GGlg~ 307 (325)
.||+-.
T Consensus 83 iGG~d~ 88 (111)
T 2ct6_A 83 CGDYDS 88 (111)
T ss_dssp EEEHHH
T ss_pred EeCHHH
Confidence 688754
No 140
>2yan_A Glutaredoxin-3; oxidoreductase; HET: GSH; 1.90A {Homo sapiens}
Probab=36.68 E-value=35 Score=25.00 Aligned_cols=69 Identities=20% Similarity=0.148 Sum_probs=41.6
Q ss_pred CcEEEEEec----hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-CCeEEEEecCCCCCCHHHHH
Q 020510 239 KDVTITAFS----KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVGAEI 309 (325)
Q Consensus 239 ~dv~Iia~G----~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-~~~vvvvEe~~~~GGlg~~v 309 (325)
.+++|.+.| .....+..|.+.|++.|++...+|+..- |--.+.+.+.... +-..+++ ++...||+-...
T Consensus 17 ~~vvvf~~g~~~~~~C~~C~~~~~~L~~~~i~~~~vdi~~~-~~~~~~l~~~~g~~~vP~v~i-~g~~igg~d~~~ 90 (105)
T 2yan_A 17 ASVMLFMKGNKQEAKCGFSKQILEILNSTGVEYETFDILED-EEVRQGLKAYSNWPTYPQLYV-KGELVGGLDIVK 90 (105)
T ss_dssp SSEEEEESBCSSSBCTTHHHHHHHHHHHHTCCCEEEEGGGC-HHHHHHHHHHHTCCSSCEEEE-TTEEEECHHHHH
T ss_pred CCEEEEEecCCCCCCCccHHHHHHHHHHCCCCeEEEECCCC-HHHHHHHHHHHCCCCCCeEEE-CCEEEeChHHHH
Confidence 357777765 5567788888899888999999998752 1111223332222 2124455 555678875433
No 141
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=36.68 E-value=1e+02 Score=23.80 Aligned_cols=32 Identities=16% Similarity=0.128 Sum_probs=23.3
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
..++|+++|.... ..++.|.+.|.++.+++..
T Consensus 4 ~~vlI~G~G~vG~---~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 4 DHFIVCGHSILAI---NTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp SCEEEECCSHHHH---HHHHHHHHTTCCEEEEECC
T ss_pred CcEEEECCCHHHH---HHHHHHHHCCCCEEEEECC
Confidence 4678888876654 4456677789999999864
No 142
>3h8q_A Thioredoxin reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC, developmental protein, differentiation; 2.21A {Homo sapiens} SCOP: c.47.1.0
Probab=36.21 E-value=1e+02 Score=22.87 Aligned_cols=67 Identities=18% Similarity=0.244 Sum_probs=42.2
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHH----h-CCCeEEEEecCCCCCCHHHH
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV----R-KTNRLVTVEEGFPQHGVGAE 308 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~----~-~~~~vvvvEe~~~~GGlg~~ 308 (325)
..+++|.+. +....+.+|.+.|++.|++.+.+++.... +...+.+.+ . .+-..+++ ++...||+...
T Consensus 16 ~~~v~vy~~-~~Cp~C~~ak~~L~~~~i~~~~~dvd~~~--~~~~~~~~l~~~~g~~tvP~vfi-~g~~igG~d~l 87 (114)
T 3h8q_A 16 RSRVVIFSK-SYCPHSTRVKELFSSLGVECNVLELDQVD--DGARVQEVLSEITNQKTVPNIFV-NKVHVGGCDQT 87 (114)
T ss_dssp HCSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEETTTST--THHHHHHHHHHHHSCCSSCEEEE-TTEEEESHHHH
T ss_pred cCCEEEEEc-CCCCcHHHHHHHHHHcCCCcEEEEecCCC--ChHHHHHHHHHHhCCCccCEEEE-CCEEEeCHHHH
Confidence 346777654 66778889999999999999999887542 333333323 1 12224555 55567887543
No 143
>1s3c_A Arsenate reductase; ARSC, arsenite, oxidoreductase; 1.25A {Escherichia coli} PDB: 1sd9_A 1i9d_A 1j9b_A 1sd8_A 1jzw_A* 1sk1_A* 1sjz_A* 1sk0_A* 1sk2_A 1s3d_A
Probab=35.78 E-value=27 Score=27.74 Aligned_cols=43 Identities=16% Similarity=0.261 Sum_probs=35.5
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT 290 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~ 290 (325)
-.....+.+|.+.|+++|++.+++|+.. .|.+.+.|.+.+++.
T Consensus 9 ~p~C~~crkak~~L~~~gi~~~~idi~~-~~~~~~eL~~~~~~~ 51 (141)
T 1s3c_A 9 NPASGTSRNTLEMIRNSGTEPTIILYLE-NPPSRDELVKLIADM 51 (141)
T ss_dssp CTTCHHHHHHHHHHHHTTCCCEEECTTT-SCCCHHHHHHHHHHH
T ss_pred CCCChHHHHHHHHHHHcCCCEEEEECCC-CCccHHHHHHHhccc
Confidence 3566788999999999999999999975 688888887777654
No 144
>2fvt_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: c.103.1.1
Probab=35.66 E-value=12 Score=29.83 Aligned_cols=36 Identities=14% Similarity=0.044 Sum_probs=26.8
Q ss_pred CCcEEEEEechhHH-HHHHHHHHHHhcCCcEEEEEee
Q 020510 238 GKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 238 G~dv~Iia~G~~~~-~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
..|++||++|.... .--+..+.|++.||.+++.|-.
T Consensus 67 ~pevliiGTG~~~~~l~p~l~~~l~~~GI~vE~M~T~ 103 (135)
T 2fvt_A 67 AIDTLIVGTGADVWIAPRQLREALRGVNVVLDTMQTG 103 (135)
T ss_dssp SCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 37999999996542 2235557788899999998754
No 145
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=35.61 E-value=1.1e+02 Score=23.26 Aligned_cols=32 Identities=19% Similarity=0.286 Sum_probs=24.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
..++|+++|.+-.. .++.|.+.|.++.++|..
T Consensus 8 ~~viIiG~G~~G~~---la~~L~~~g~~v~vid~~ 39 (140)
T 3fwz_A 8 NHALLVGYGRVGSL---LGEKLLASDIPLVVIETS 39 (140)
T ss_dssp SCEEEECCSHHHHH---HHHHHHHTTCCEEEEESC
T ss_pred CCEEEECcCHHHHH---HHHHHHHCCCCEEEEECC
Confidence 46889999886653 456787889999999853
No 146
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=35.60 E-value=93 Score=28.57 Aligned_cols=63 Identities=8% Similarity=0.112 Sum_probs=41.6
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
|.+-..|..+++.|+++|++++++++... +.+.+.+.+..++.|++.=--+ .|++...+..++
T Consensus 268 GnT~~la~~i~~~l~~~g~~v~~~~l~~~---~~~~~~~~l~~~D~iiigsP~y-~~~~~~~~k~fl 330 (414)
T 2q9u_A 268 GTTHRMALALLDGARSTGCETVLLEMTSS---DITKVALHTYDSGAVAFASPTL-NNTMMPSVAAAL 330 (414)
T ss_dssp SHHHHHHHHHHHHHHHTTCEEEEEEGGGC---CHHHHHHHHHTCSEEEEECCCB-TTBCCHHHHHHH
T ss_pred chHHHHHHHHHHHHHhCCCeEEEEEcCcC---CHHHHHHHHHhCCEEEEEcCcc-CcCchHHHHHHH
Confidence 44556677777778778999999987653 4555555677777766664433 566665565554
No 147
>2fi9_A Outer membrane protein; bartonella hense protein structure initiative, midwest center for structural genomics, MCSG; 1.80A {Bartonella henselae} SCOP: c.103.1.1
Probab=35.43 E-value=13 Score=29.35 Aligned_cols=36 Identities=14% Similarity=0.130 Sum_probs=27.0
Q ss_pred CCcEEEEEechhH-HHHHHHHHHHHhcCCcEEEEEee
Q 020510 238 GKDVTITAFSKIV-GLSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 238 G~dv~Iia~G~~~-~~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
..|++||++|... ..--+..+.|++.||.+++.|-.
T Consensus 68 ~pevliiGtG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 104 (128)
T 2fi9_A 68 QIEVLLIGTGVELLRLPEELRVLLWEKRISSDTMSTG 104 (128)
T ss_dssp GCSEEEEECTTSCCCCCHHHHHHHHHTTCEEEEECHH
T ss_pred CCCEEEECCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 3799999999764 22335567888999999998754
No 148
>1w85_A Pyruvate dehydrogenase E1 component, alpha subunit; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: c.36.1.11 PDB: 3duf_A* 3dv0_A* 3dva_A* 1w88_A*
Probab=35.19 E-value=53 Score=30.50 Aligned_cols=33 Identities=21% Similarity=0.350 Sum_probs=24.8
Q ss_pred cCCCcEEEeeCCHHHHHHHHHHhHh----CCCcEEEEe
Q 020510 172 SVPGLKVLSPYSSEDARGLLKAAIR----DPDPVVFLE 205 (325)
Q Consensus 172 ~iP~~~V~~P~d~~e~~~~l~~a~~----~~~Pv~ir~ 205 (325)
.+|++.| .-.|+.++...++.|++ .++|++|-.
T Consensus 227 G~~~~~V-dG~D~~av~~a~~~A~~~~r~~~gP~lIe~ 263 (368)
T 1w85_A 227 GIPGIQV-DGMDPLAVYAAVKAARERAINGEGPTLIET 263 (368)
T ss_dssp TCCEEEE-ETTCHHHHHHHHHHHHHHHHTTSCCEEEEE
T ss_pred CCCEEEE-cCCCHHHHHHHHHHHHHHHHhcCCCEEEEE
Confidence 4666554 44589999999999886 578999853
No 149
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=34.91 E-value=54 Score=29.91 Aligned_cols=53 Identities=11% Similarity=0.224 Sum_probs=33.1
Q ss_pred EEEEechh----HHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEe
Q 020510 242 TITAFSKI----VGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVE 297 (325)
Q Consensus 242 ~Iia~G~~----~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvE 297 (325)
++|.++++ -..|..+++.|.++|++++++++.. .+.+.+.+.+..++.+++.-
T Consensus 254 i~i~y~S~~GnT~~lA~~ia~~l~~~g~~v~~~~~~~---~~~~~~~~~~~~~d~ii~g~ 310 (398)
T 1ycg_A 254 AVIAYDTMWLSTEKMAHALMDGLVAGGCEVKLFKLSV---SDRNDVIKEILDARAVLVGS 310 (398)
T ss_dssp EEEEECCSSSHHHHHHHHHHHHHHHTTCEEEEEEGGG---SCHHHHHHHHHHCSEEEEEC
T ss_pred EEEEEECCccHHHHHHHHHHHHHHhcCCeEEEEECCC---CCHHHHHHHHHHCCEEEEEC
Confidence 44455554 4456666667777799999888753 45555555566666655553
No 150
>1t1v_A SH3BGRL3, SH3 domain-binding glutamic acid-rich protein-LIK; glutaredoxin, thioredoxin fold, protein 3D-structure, X-RAY crystallography; 1.60A {Mus musculus} SCOP: c.47.1.14 PDB: 1j0f_A 1sj6_A
Probab=34.91 E-value=33 Score=24.53 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=34.0
Q ss_pred HHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC---CCeEEEEecCCCCCCHHHHHHHHH
Q 020510 254 LKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK---TNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 254 ~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~---~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.+|.+.|++.|++.+.+|+..- |-..+.+.+.... +-..|++++.. .||+-. +.+..
T Consensus 22 ~~ak~~L~~~~i~~~~~di~~~-~~~~~~l~~~~g~~~~~vP~ifi~g~~-igG~d~-l~~l~ 81 (93)
T 1t1v_A 22 SEVTRILDGKRIQYQLVDISQD-NALRDEMRTLAGNPKATPPQIVNGNHY-CGDYEL-FVEAV 81 (93)
T ss_dssp HHHHHHHHHTTCCCEEEETTSC-HHHHHHHHHHTTCTTCCSCEEEETTEE-EEEHHH-HHHHH
T ss_pred HHHHHHHHHCCCceEEEECCCC-HHHHHHHHHHhCCCCCCCCEEEECCEE-EeCHHH-HHHHH
Confidence 6788889999999999998742 2112334333321 22356776654 688744 44433
No 151
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=34.82 E-value=72 Score=29.13 Aligned_cols=63 Identities=16% Similarity=0.089 Sum_probs=40.1
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
|.+-..|..+++.|++.|++++++++. ..+.+.+.+.+..++.|++.=--+ .|++...+..++
T Consensus 268 gnT~~la~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~l~~~d~iiigsP~y-~~~~~~~~k~~l 330 (404)
T 2ohh_A 268 GSTRKMAHAIAEGAMSEGVDVRVYCLH---EDDRSEIVKDILESGAIALGAPTI-YDEPYPSVGDLL 330 (404)
T ss_dssp SHHHHHHHHHHHHHHTTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECCEE-TTEECTHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECccc-cccchHHHHHHH
Confidence 334566677777777778999888865 445666666777787766653322 455544455444
No 152
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=34.53 E-value=1e+02 Score=28.04 Aligned_cols=70 Identities=11% Similarity=0.177 Sum_probs=40.8
Q ss_pred CcEEEEEechhH----HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 239 KDVTITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 239 ~dv~Iia~G~~~----~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.+++ |.++++. ..|...++.|+++|++++++++. ..+.+.+.+.+..++.|++.-- ...++.-..+.+++
T Consensus 253 ~kv~-i~y~S~~Gnt~~lA~~i~~~l~~~g~~v~~~~~~---~~~~~~~~~~~~~~d~ii~gsp-~~~~~~~~~~~~~l 326 (402)
T 1e5d_A 253 NKVV-IFYDSMWHSTEKMARVLAESFRDEGCTVKLMWCK---ACHHSQIMSEISDAGAVIVGSP-THNNGILPYVAGTL 326 (402)
T ss_dssp SEEE-EEECCSSSHHHHHHHHHHHHHHHTTCEEEEEETT---TSCHHHHHHHHHTCSEEEEECC-CBTTBCCHHHHHHH
T ss_pred CcEE-EEEECCChhHHHHHHHHHHHHHhCCCeEEEEECC---CCCHHHHHHHHHHCCEEEEECC-ccCCCchHHHHHHH
Confidence 3444 4455543 44555666777778888888765 4456666566777776555543 33455544454444
No 153
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=34.47 E-value=1.2e+02 Score=24.95 Aligned_cols=64 Identities=6% Similarity=0.010 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHHhc--CCcEEEEEeeec--cCCCH-------------------------HHHHHHHhCCCeEEEEecC
Q 020510 249 IVGLSLKAAEILAKE--GISAEVINLRSI--RPLDR-------------------------STINASVRKTNRLVTVEEG 299 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~--Gi~~~Vi~~~~l--~P~d~-------------------------~~l~~~~~~~~~vvvvEe~ 299 (325)
....+..+++.|++. |.+++++|+... .+++. +.+.+.+...+.||+.=--
T Consensus 18 t~~l~~~~~~~~~~~~~g~~v~~~dL~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~ 97 (212)
T 3r6w_A 18 SRRLAEVFLAAYREAHPQARVARREVGRVPLPAVTEAFVAAAFHPQPEQRSLAMQADLALSDQLVGELFDSDLLVISTPM 97 (212)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEESSSSCCCCCCHHHHHHHTCSSGGGCCHHHHHHHHHHHHHHHHHHHCSEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHHhhcCCcccCCHHHHHHHHHHHHHHHHHHhCCEEEEEcCc
Confidence 345666777888877 899999999653 33432 2233456667776665544
Q ss_pred CCCCCHHHHHHHHH
Q 020510 300 FPQHGVGAEIWCAF 313 (325)
Q Consensus 300 ~~~GGlg~~v~~~l 313 (325)
+ .+++...+..++
T Consensus 98 y-~~~~pa~lK~~i 110 (212)
T 3r6w_A 98 Y-NFSVPSGLKAWI 110 (212)
T ss_dssp B-TTBCCHHHHHHH
T ss_pred c-cccCCHHHHHHH
Confidence 4 577777666554
No 154
>1gpu_A Transketolase; transferase(ketone residues); HET: THD; 1.86A {Saccharomyces cerevisiae} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 1ngs_A* 1trk_A* 1ay0_A* 1tkb_A* 1tka_A* 1tkc_A*
Probab=34.41 E-value=89 Score=31.49 Aligned_cols=84 Identities=13% Similarity=0.055 Sum_probs=48.2
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeCC-CCCCCCCCCc---chHHHHHHhcCCCcEEE-e
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGPN-GAAAGVGAQH---SHCYAAWYASVPGLKVL-S 180 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~~-G~~~g~G~tH---s~~~~a~~~~iP~~~V~-~ 180 (325)
.++++. .+. ++ -.++.+. .++. .++| ++++..+ +... .+.+. +..+...++.. |+.++ .
T Consensus 150 ~vv~i~-GDG~~~eG~~~Eal~-~A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~~ 217 (680)
T 1gpu_A 150 YTYVFL-GDGCLQEGISSEASS-LAGH--------LKLGNLIAIYDDNKITI-DGATSISFDEDVAKRYEAY-GWEVLYV 217 (680)
T ss_dssp CEEEEE-CHHHHHSHHHHHHHH-HHHH--------TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHH-TCEEEEE
T ss_pred eEEEEE-CCCccchhhHHHHHH-HHHH--------hCCCcEEEEEECCCceE-ecccccccCccHHHHHHhc-CCeEEEE
Confidence 444454 554 44 4566664 3453 4666 5555432 3221 12221 12334566665 78887 3
Q ss_pred eC---CHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 181 PY---SSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 181 P~---d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
-. |..++...++.+.+ .++|++|..
T Consensus 218 vdG~~d~~~l~~al~~A~~~~~~P~lI~~ 246 (680)
T 1gpu_A 218 ENGNEDLAGIAKAIAQAKLSKDKPTLIKM 246 (680)
T ss_dssp SCTTTCHHHHHHHHHHHHHCTTSCEEEEE
T ss_pred ecCCCCHHHHHHHHHHHHHCCCCCEEEEE
Confidence 33 78899999999887 578998854
No 155
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=34.41 E-value=59 Score=26.37 Aligned_cols=67 Identities=10% Similarity=0.097 Sum_probs=43.5
Q ss_pred echhHHHHHHHHHHHHh-cCCcEEEEEeeeccCCCHHHH--------------HHHHhCCCeEEEEecCCCCCCHHHHHH
Q 020510 246 FSKIVGLSLKAAEILAK-EGISAEVINLRSIRPLDRSTI--------------NASVRKTNRLVTVEEGFPQHGVGAEIW 310 (325)
Q Consensus 246 ~G~~~~~a~~Aa~~L~~-~Gi~~~Vi~~~~l~P~d~~~l--------------~~~~~~~~~vvvvEe~~~~GGlg~~v~ 310 (325)
+|.+-..|..+++.|++ .|++++++++....| .... .+.+..++.||+.=--+ .|++...+.
T Consensus 12 ~g~t~~la~~i~~~l~~~~g~~v~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~aD~ii~gsP~y-~~~~~~~lk 88 (198)
T 3b6i_A 12 YGHIETMARAVAEGASKVDGAEVVVKRVPETMP--PQLFEKAGGKTQTAPVATPQELADYDAIIFGTPTR-FGNMSGQMR 88 (198)
T ss_dssp SSHHHHHHHHHHHHHHTSTTCEEEEEECCCCSC--HHHHHHTTCCCCCSCBCCGGGGGGCSEEEEEEEEE-TTEECHHHH
T ss_pred CcHHHHHHHHHHHHHhhcCCCEEEEEEccccCc--hhhhhhcccccccCchhhHHHHHHCCEEEEEeChh-cCCchHHHH
Confidence 36666777788888888 899999999987522 1110 23455666655554433 577777777
Q ss_pred HHHcC
Q 020510 311 CAFFP 315 (325)
Q Consensus 311 ~~l~~ 315 (325)
.++-.
T Consensus 89 ~~ld~ 93 (198)
T 3b6i_A 89 TFLDQ 93 (198)
T ss_dssp HHHTT
T ss_pred HHHHH
Confidence 76643
No 156
>2r8o_A Transketolase 1, TK 1; reaction intermediate, calcium, metal-binding, thiamine pyrophosphate, transferase; HET: T5X; 1.47A {Escherichia coli K12} SCOP: c.36.1.6 c.36.1.10 c.48.1.1 PDB: 2r5n_A* 2r8p_A* 1qgd_A*
Probab=34.40 E-value=1e+02 Score=31.00 Aligned_cols=84 Identities=13% Similarity=0.126 Sum_probs=48.7
Q ss_pred eEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEEeCC-CCCCCCCCCc---chHHHHHHhcCCCcEEE-e
Q 020510 110 PVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFRGPN-GAAAGVGAQH---SHCYAAWYASVPGLKVL-S 180 (325)
Q Consensus 110 p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~~~~-G~~~g~G~tH---s~~~~a~~~~iP~~~V~-~ 180 (325)
.++++. .+. ++ -.++.+.. ++. .++| ++++..+ +... .+.+. +..+...++.. |+.++ .
T Consensus 148 ~v~~~~-GDG~~~eG~~~Eal~~-A~~--------~~L~~li~i~~nN~~~i-~~~~~~~~~~d~~~~~~a~-G~~~~~~ 215 (669)
T 2r8o_A 148 YTYAFM-GDGCMMEGISHEVCSL-AGT--------LKLGKLIAFYDDNGISI-DGHVEGWFTDDTAMRFEAY-GWHVIRD 215 (669)
T ss_dssp CEEEEE-CHHHHHSHHHHHHHHH-HHH--------TTCTTEEEEEEECSEET-TEEGGGTCCCCHHHHHHHT-TCEEEEE
T ss_pred eEEEEE-CHhHhcchHHHHHHHH-HHH--------cCCCcEEEEEECCCcEe-ccccccccCccHHHHHHHC-CCeEEeE
Confidence 444454 554 44 45676643 453 4666 5555432 3221 12221 12334677766 77776 3
Q ss_pred --eCCHHHHHHHHHHhHh-CCCcEEEEe
Q 020510 181 --PYSSEDARGLLKAAIR-DPDPVVFLE 205 (325)
Q Consensus 181 --P~d~~e~~~~l~~a~~-~~~Pv~ir~ 205 (325)
-.|..++...++.+.+ .++|++|..
T Consensus 216 vdG~d~~~l~~al~~a~~~~~~P~lI~~ 243 (669)
T 2r8o_A 216 IDGHDAASIKRAVEEARAVTDKPSLLMC 243 (669)
T ss_dssp EETTCHHHHHHHHHHHHHCCSSCEEEEE
T ss_pred ECCCCHHHHHHHHHHHHhcCCCCEEEEE
Confidence 3389999999999987 578998854
No 157
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=34.38 E-value=31 Score=29.73 Aligned_cols=36 Identities=17% Similarity=0.062 Sum_probs=27.0
Q ss_pred cEEEEEechhHHHHHHHHHHHHh---cCCcEEEEEeeec
Q 020510 240 DVTITAFSKIVGLSLKAAEILAK---EGISAEVINLRSI 275 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~---~Gi~~~Vi~~~~l 275 (325)
+-++|.||+++..+.+.|+.|.+ .|+++.|+++...
T Consensus 41 ~kv~IlYgS~tGnte~~A~~La~~l~~g~~v~v~~l~~~ 79 (219)
T 3hr4_A 41 VRVTILFATETGKSEALAWDLGALFSCAFNPKVVCMDKY 79 (219)
T ss_dssp CEEEEEEECSSSHHHHHHHHHHHHHTTTSEEEEEEGGGC
T ss_pred CcEEEEEECCchHHHHHHHHHHHHHHcCCCeEEEEcccC
Confidence 34556699999888888887765 3788888887654
No 158
>3mos_A Transketolase, TK; thiamin diphosphate TPP THDP enzyme catalysis sugar metaboli transferase; HET: TPP; 1.75A {Homo sapiens} PDB: 3ooy_A*
Probab=34.07 E-value=1.3e+02 Score=29.78 Aligned_cols=97 Identities=18% Similarity=0.127 Sum_probs=51.3
Q ss_pred HHHHHHHHhccC------CeeEEecccccH-HH--HHHHHHHHHHhhccccCCCCccCC-EEEE-eCCCCC--CCCCCCc
Q 020510 96 FTGIGVGAAYYG------LKPVVEFMTFNF-SM--QAIDHIINSAAKSNYMSSGQISVP-IVFR-GPNGAA--AGVGAQH 162 (325)
Q Consensus 96 ~vg~A~GlA~~G------~~p~v~~~~~~f-~~--ra~dqi~~~~a~~~~~~~~~~~~p-vv~~-~~~G~~--~g~G~tH 162 (325)
.+++|.|+|++. -+.++++. .+. ++ -+++.+.. ++. .++| ++++ ..++.. ......+
T Consensus 126 gl~~A~G~AlA~~~~~~~~~~vv~v~-GDG~~~eG~~~Eal~~-A~~--------~~l~~livi~nnN~~~i~~~~~~~~ 195 (616)
T 3mos_A 126 GLGAACGMAYTGKYFDKASYRVYCLL-GDGELSEGSVWEAMAF-ASI--------YKLDNLVAILDINRLGQSDPAPLQH 195 (616)
T ss_dssp HHHHHHHHHHHHHHTSCCSCCEEEEE-ETGGGGSHHHHHHHHH-HHH--------TTCTTEEEEEEECSBCSSSBCTTTT
T ss_pred ccHHHHHHHHHHHHhCCCCCEEEEEE-CccccccCcHHHHHHH-HHH--------cCCCcEEEEEECCCCCCcCCccccc
Confidence 356667776542 14455554 443 33 56676643 443 4665 3333 333322 1122222
Q ss_pred chH-HHHHHhcCCCcEEEee--CCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 163 SHC-YAAWYASVPGLKVLSP--YSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 163 s~~-~~a~~~~iP~~~V~~P--~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
... +...++.. |+.++.- .|.+++...++.+ .++|++|..
T Consensus 196 ~~~~~~~~~~a~-G~~~~~VdG~d~~~l~~al~~~--~~~P~lI~v 238 (616)
T 3mos_A 196 QMDIYQKRCEAF-GWHAIIVDGHSVEELCKAFGQA--KHQPTAIIA 238 (616)
T ss_dssp CHHHHHHHHHHT-TCEEEEEETTCHHHHHHHHHSC--CSSCEEEEE
T ss_pred ChHHHHHHHHHc-CCeEEEEcCCCHHHHHHHHHhc--CCCCEEEEE
Confidence 222 24677776 7777633 3677777777654 468999853
No 159
>3ic4_A Glutaredoxin (GRX-1); structural genomics, PSI, MCSG, protein structure initiative, midwest center for structural genomic oxidoreductase; 1.70A {Archaeoglobus fulgidus}
Probab=33.91 E-value=28 Score=24.53 Aligned_cols=72 Identities=15% Similarity=0.164 Sum_probs=41.7
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCH----HHHHHHHh-CCCeEEEEecCCCCCCHHH-HHHHHH
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDR----STINASVR-KTNRLVTVEEGFPQHGVGA-EIWCAF 313 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~----~~l~~~~~-~~~~vvvvEe~~~~GGlg~-~v~~~l 313 (325)
+++|.+ -.....+.++...|++.|++.+.+|+....+-+. +.+.+... .+-.++++ ++...||+.. .+.++|
T Consensus 13 ~v~ly~-~~~Cp~C~~~~~~L~~~gi~~~~~~v~~~~~~~~~~~~~~l~~~~g~~~vP~l~~-~g~~i~G~~~~~l~~~l 90 (92)
T 3ic4_A 13 EVLMYG-LSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERKKVIEKVHSISGSYSVPVVVK-GDKHVLGYNEEKLKELI 90 (92)
T ss_dssp SSEEEE-CTTCHHHHHHHHHHHHHTCCCEEEEGGGCCHHHHHHHHHHHHHHHSSSCSCEEEE-TTEEEESCCHHHHHHHH
T ss_pred eEEEEE-CCCChHHHHHHHHHHHcCCCcEEEEeeeCCccchHHHHHHHHHhcCCCCcCEEEE-CCEEEeCCCHHHHHHHh
Confidence 455554 3456778888888988899999999876543222 22222221 12235555 4455678743 344443
No 160
>4bby_A Alkyldihydroxyacetonephosphate synthase, peroxiso; transferase, plasmalogen, flavin, peroxisome; HET: FAD; 1.90A {Cavia porcellus} PDB: 4bc9_A* 4bca_A* 4bc7_A*
Probab=33.90 E-value=2.1e+02 Score=28.53 Aligned_cols=91 Identities=12% Similarity=0.073 Sum_probs=55.3
Q ss_pred HHhcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEEeCc-cccCcccCccccccCCCcccc---CCceEEeeeCCcEEEE
Q 020510 169 WYASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENE-LLYGESFPVSAEVLDSSFCLP---IGKAKIEREGKDVTIT 244 (325)
Q Consensus 169 ~~~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~-~l~~~~~p~~~~~~~~~~~~~---~gk~~vl~~G~dv~Ii 244 (325)
.++.+|. .|+.|.+.+|+..++++|.+++-|++.|-.. .+.+...+..... ...-.+. +.+...+.+...++.|
T Consensus 201 ~~~~~P~-aVV~P~s~eeV~~iv~~A~~~~ipVvprGgGTsl~GG~~~~~~~~-~ggVvLDlsrMnrIleiD~~~~~atV 278 (658)
T 4bby_A 201 MFERIPD-IVLWPTCHDDVVKIVNLACKYNLCIIPIGGGTSVSYGLMCPADET-RTIISLDTSQMNRILWVDENNLTAHV 278 (658)
T ss_dssp CCSCCCS-EEEECCSHHHHHHHHHHHHHTTCEEEEESSCCCSSSTTCCCTTCC-SCEEEEECTTCCCEEEEETTTTEEEE
T ss_pred cccCCcC-EEEeeCCHHHHHHHHHHHHHCCCeEEEECCCcCCCCCCCCCCCCC-CcEEEEECccCCCcEEEcCCCCEEEE
Confidence 4556786 5889999999999999999999999987321 1111111100000 0001112 3333334456678888
Q ss_pred EechhHHHHHHHHHHHHhcC
Q 020510 245 AFSKIVGLSLKAAEILAKEG 264 (325)
Q Consensus 245 a~G~~~~~a~~Aa~~L~~~G 264 (325)
-.|.......++ |+++|
T Consensus 279 eaGv~~~~L~~~---L~~~G 295 (658)
T 4bby_A 279 EAGITGQELERQ---LKESG 295 (658)
T ss_dssp ETTCBHHHHHHH---HHHHT
T ss_pred ecCchHHHHHHH---HHHcC
Confidence 889998887765 44555
No 161
>2gm2_A Conserved hypothetical protein; MTH938-like fold, structural genomics, PSI, protein structure initiative; NMR {Xanthomonas campestris PV}
Probab=33.72 E-value=12 Score=29.68 Aligned_cols=38 Identities=13% Similarity=0.031 Sum_probs=28.1
Q ss_pred eeCCcEEEEEechhHH-HHHHHHHHHHhcCCcEEEEEee
Q 020510 236 REGKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 236 ~~G~dv~Iia~G~~~~-~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
....|++||++|.... .--+..+.|++.||.+++.|-.
T Consensus 62 ~~~pevliiGTG~~~~~l~p~~~~~l~~~GI~vE~m~T~ 100 (132)
T 2gm2_A 62 ALNPAVILLGTGERQQFPSTDVLAACLTRGIGLEAMTNA 100 (132)
T ss_dssp HHCCSEEEEECTTSCCCCCHHHHHHHHHHTCEEEEECHH
T ss_pred hcCCCEEEECCCCCCCcCCHHHHHHHHHcCCEEEEeCHH
Confidence 4458999999996653 2334557788889999998754
No 162
>1ijb_A VON willebrand factor; dinucleotide-binding fold, blood clotting; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 1ijk_A 1auq_A 1u0n_A 3hxo_A 1uex_C 3hxq_A 1sq0_A 1m10_A 1fns_A 1oak_A 1u0o_C
Probab=33.52 E-value=48 Score=27.33 Aligned_cols=45 Identities=9% Similarity=0.093 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC--CCeEEEEec
Q 020510 252 LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK--TNRLVTVEE 298 (325)
Q Consensus 252 ~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~--~~~vvvvEe 298 (325)
...++++.|++.|+.+-.|-+.. ..|.+.|.+++.. .++++.+++
T Consensus 134 ~~~~~a~~l~~~gi~i~~igvG~--~~~~~~L~~iA~~~~~~~~~~~~~ 180 (202)
T 1ijb_A 134 NFVRYVQGLKKKKVIVIPVGIGP--HANLKQIRLIEKQAPENKAFVLSS 180 (202)
T ss_dssp THHHHHHHHHHTTEEEEEEEEST--TSCHHHHHHHHHHCTTCCCEEESS
T ss_pred HHHHHHHHHHHCCCEEEEEecCC--cCCHHHHHHHhCCCCcccEEEeCC
Confidence 46677888888887766666653 4788888877753 356777765
No 163
>1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1
Probab=32.56 E-value=1.1e+02 Score=24.10 Aligned_cols=59 Identities=8% Similarity=0.158 Sum_probs=38.7
Q ss_pred CcEEEEEec-hhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHH-HhCCCeEEEEec
Q 020510 239 KDVTITAFS-KIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINAS-VRKTNRLVTVEE 298 (325)
Q Consensus 239 ~dv~Iia~G-~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~-~~~~~~vvvvEe 298 (325)
.++.||..+ .....|.+..+.|++.|+.+++.+.++=-++.. .|++. ..+...++||-+
T Consensus 9 ~Qv~IlpVs~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~-kIR~a~~~kvPy~lVVG~ 69 (130)
T 1v95_A 9 VDCSVIVVNKQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQ-ALEDVSRGGSPFAIVITQ 69 (130)
T ss_dssp CTEEEEESSSGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHH-HHHHHHHHTCSEEEEECH
T ss_pred CeEEEEEeCcchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHH-HHHHHHHcCCCEEEEEec
Confidence 366677666 455899999999999999999855432233433 34443 335666777644
No 164
>3pu6_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.60A {Wolinella succinogenes}
Probab=31.47 E-value=94 Score=25.03 Aligned_cols=55 Identities=9% Similarity=0.176 Sum_probs=36.6
Q ss_pred cEEEEEechhH----HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHh--CCCeEEEEec
Q 020510 240 DVTITAFSKIV----GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVR--KTNRLVTVEE 298 (325)
Q Consensus 240 dv~Iia~G~~~----~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~--~~~~vvvvEe 298 (325)
+++|+++|+.+ .....+++.|++.=-+++++|..+. |++. + ..++ ++++++++|=
T Consensus 4 ~ilVlGiGN~L~gDDG~G~~v~~~L~~~~p~v~vid~Gt~-~~~l--~-~~l~~~~~d~lIiVDA 64 (157)
T 3pu6_A 4 KKVLLCVGNELRGDDGVAIALGRLVEEQMPEWSVFFGYDT-PESE--F-GKLRELAPDVIVVADA 64 (157)
T ss_dssp CEEEEEECCTTBGGGGHHHHHHHHHHHHCTTEEEEEEETC-GGGG--H-HHHHHHCCSEEEEEEE
T ss_pred CEEEEEECCcccccccHHHHHHHHHHhhCCCeEEEECCCC-HHHH--H-HHHHhcCCCEEEEEEe
Confidence 57889999775 2456777777643227999999873 4432 2 2333 4788888874
No 165
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=31.42 E-value=86 Score=26.09 Aligned_cols=60 Identities=17% Similarity=0.212 Sum_probs=36.7
Q ss_pred HHHHHHHHHHhcCCcEE-EEEeeeccCCC-----------HHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 252 LSLKAAEILAKEGISAE-VINLRSIRPLD-----------RSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 252 ~a~~Aa~~L~~~Gi~~~-Vi~~~~l~P~d-----------~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.+..+++.+ ++|.+++ ++|+..+-.++ .+.+.+.++..+.||++---+ .+++...+..++
T Consensus 25 la~~~~~~~-~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~~~~i~~AD~iVi~tP~Y-~~s~p~~LK~~i 96 (199)
T 4hs4_A 25 VARALPEIA-PEGIAITPLGSIGTFPHYSQDVQEEGFPAPVLTMAQQIATADAVVIVTPEY-NYSVPGVLKNAI 96 (199)
T ss_dssp HHHHHHHHC-CTTEEEEECCCGGGSCCCCHHHHHHCCCHHHHHHHHHHHHSSEEEEEECCB-TTBCCHHHHHHH
T ss_pred HHHHHHHHc-cCCCEEEEEEehhhcCCCCccccccCCCHHHHHHHHHHHhCCEEEEEcCcc-CCCcCHHHHHHH
Confidence 344444444 4588899 99987763333 234666777888776665544 577766655443
No 166
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=31.25 E-value=1.3e+02 Score=28.02 Aligned_cols=75 Identities=11% Similarity=-0.012 Sum_probs=46.0
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee-------------eccCCCHHHHHHHHhCCCeEEEEecCCCCC
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR-------------SIRPLDRSTINASVRKTNRLVTVEEGFPQH 303 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~-------------~l~P~d~~~l~~~~~~~~~vvvvEe~~~~G 303 (325)
.|+++.|++.|........+ +++.|+++-++|.. .....|.+.|.+++++.+ +|+.|-...
T Consensus 34 ~~~~IlIlG~G~lg~~~~~a---a~~lG~~v~v~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~a~~~D-~V~~~~e~~-- 107 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFA---AQSMGYRVAVLDPDPASPAGAVADRHLRAAYDDEAALAELAGLCE-AVSTEFENV-- 107 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHH---HHHTTCEEEEECSCTTCHHHHHSSEEECCCTTCHHHHHHHHHHCS-EEEECCTTC--
T ss_pred CCCEEEEECCCHHHHHHHHH---HHHCCCEEEEECCCCcCchhhhCCEEEECCcCCHHHHHHHHhcCC-EEEEccCcC--
Confidence 56789999988665544444 45569999998853 122347788888886665 455653322
Q ss_pred CHHHHHHHHHcCCCcc
Q 020510 304 GVGAEIWCAFFPPAWL 319 (325)
Q Consensus 304 Glg~~v~~~l~~~~~~ 319 (325)
...+++.+.+.+++
T Consensus 108 --~~~~~~~l~~~~~v 121 (419)
T 4e4t_A 108 --PAASLDFLARTTFV 121 (419)
T ss_dssp --CHHHHHHHHTTSEE
T ss_pred --CHHHHHHHHccCCc
Confidence 23455555554443
No 167
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=30.29 E-value=43 Score=32.78 Aligned_cols=144 Identities=10% Similarity=0.119 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHhc-CCcEEEEecCCCCccCccccchhHHHHhCCCceeechh--hHHHHHHHHHHHhcc-CCeeEEeccc
Q 020510 41 EALNSALDEEMSA-DPKVFLMGEEVGEYQGAYKISKGLLEKYGPERVLDTPI--TEAGFTGIGVGAAYY-GLKPVVEFMT 116 (325)
Q Consensus 41 ~a~~~~L~~l~~~-d~~iv~l~~D~~~~~g~~~~~~~~~~~~gp~R~i~~GI--aE~~~vg~A~GlA~~-G~~p~v~~~~ 116 (325)
..+.+.|.+.+.. +..++ +..|++.+. +.. ..+ . |.+|+..+- +=-..+++|.|+|++ .-++++++.
T Consensus 377 ~~v~~~l~~~l~~~~~~iv-~~~d~G~~~--~~~-~~~---~-~~~~~~~~~~g~mG~~l~~A~G~ala~~~~~vv~i~- 447 (565)
T 2nxw_A 377 MDIARAVNDRVRAGQEPLL-IAADMGDCL--FTA-MDM---I-DAGLMAPGYYAGMGFGVPAGIGAQCVSGGKRILTVV- 447 (565)
T ss_dssp HHHHHHHHHHHHTTCCCCE-EEECSSHHH--HHH-TTS---C-CSCEECCTTTCCTTCHHHHHHHHHHHTTTCCEEEEE-
T ss_pred HHHHHHHHHhcccccCCEE-EEecchHHH--HHH-HhC---C-CcEEEccCccccccccchHHHHHHHhCCCCcEEEEE-
Confidence 3455666666654 13344 234665321 111 111 2 667765321 111246677887755 235555554
Q ss_pred ccHHH-HHHHHHHHHHhhccccCCCCccCCEEEE--eCCCCCC----C-CC---CCcchHHHHHHhcCCCcEEEeeCCHH
Q 020510 117 FNFSM-QAIDHIINSAAKSNYMSSGQISVPIVFR--GPNGAAA----G-VG---AQHSHCYAAWYASVPGLKVLSPYSSE 185 (325)
Q Consensus 117 ~~f~~-ra~dqi~~~~a~~~~~~~~~~~~pvv~~--~~~G~~~----g-~G---~tHs~~~~a~~~~iP~~~V~~P~d~~ 185 (325)
.+... ..+..+.+ +.. .++|++++ ..+|... . .+ ..|.-.+..+...+ |+..+...+.+
T Consensus 448 GDG~~~~~~~~l~t-a~~--------~~l~~~ivv~nN~~~~~~~~~~~~~~~~~~~~~d~~~~a~a~-G~~~~~v~~~~ 517 (565)
T 2nxw_A 448 GDGAFQMTGWELGN-CRR--------LGIDPIVILFNNASWEMLRTFQPESAFNDLDDWRFADMAAGM-GGDGVRVRTRA 517 (565)
T ss_dssp EHHHHHHHGGGGGG-HHH--------HTCCCEEEEEECSBCHHHHHHCTTCGGGBCCCCCHHHHTGGG-TSEEEEECBHH
T ss_pred echHHHhhHHHHHH-HHH--------hCCCCEEEEEECCCCcEEeeecccCCCCcCCCCCHHHHHHHc-CCCEEEeCCHH
Confidence 55422 22222211 222 35664443 3333321 0 11 01212334555555 67788889999
Q ss_pred HHHHHHHHhHhCCCcE-EE
Q 020510 186 DARGLLKAAIRDPDPV-VF 203 (325)
Q Consensus 186 e~~~~l~~a~~~~~Pv-~i 203 (325)
|+...++++++.++|+ +|
T Consensus 518 el~~al~~a~~~~gp~~li 536 (565)
T 2nxw_A 518 ELKAALDKAFATRGRFQLI 536 (565)
T ss_dssp HHHHHHHHHHHCCSSCEEE
T ss_pred HHHHHHHHHHhcCCCeEEE
Confidence 9999999999888887 55
No 168
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=30.24 E-value=1.9e+02 Score=25.52 Aligned_cols=50 Identities=24% Similarity=0.401 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHH---HHhC----CCeEEEEecCC
Q 020510 250 VGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINA---SVRK----TNRLVTVEEGF 300 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~---~~~~----~~~vvvvEe~~ 300 (325)
-..+.+.++.++++||.+.||.+-.-. .+.+.|.+ .... ..++|+|..+.
T Consensus 122 ~~~l~~lak~lkk~gI~v~vIgFG~~~-~n~~kLe~l~~~~Ng~~~~~s~~v~v~~g~ 178 (268)
T 4b4t_W 122 RDELIRLAKTLKKNNVAVDIINFGEIE-QNTELLDEFIAAVNNPQEETSHLLTVTPGP 178 (268)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEESSCC-SSCCHHHHHHHHHCSSTTTSCEEEEECCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeCCCc-cchHHHHHHHHHhcCCCCCceeEEEeCCCC
Confidence 467888899999999999999998753 33344444 3432 24688886653
No 169
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=30.22 E-value=1.4e+02 Score=26.78 Aligned_cols=51 Identities=12% Similarity=-0.036 Sum_probs=33.1
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee------------ccCCCHHHHHHHHhCCCeEE
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRS------------IRPLDRSTINASVRKTNRLV 294 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~------------l~P~d~~~l~~~~~~~~~vv 294 (325)
+.|++.|... .+.+..+++.|+++-+++... +.+.|.+.|.+.+.+.+.|+
T Consensus 2 iliiG~g~~g---~~~~~a~~~~G~~v~~~~~~~~~~~~~~a~~~~~~~~d~~~l~~~~~~~d~v~ 64 (369)
T 3aw8_A 2 IGILGGGQLG---RMLALAGYPLGLSFRFLDPSPEACAGQVGELVVGEFLDEGALLRFAEGLALVT 64 (369)
T ss_dssp EEEECCSHHH---HHHHHHHTTBTCCEEEEESCTTCGGGGTSEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred EEEECCCHHH---HHHHHHHHHcCCEEEEEeCCCCChHHHhhceEecCCCCHHHHHHHHhCCCEEE
Confidence 6777777543 344555777899998888641 23457778888775555443
No 170
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=30.22 E-value=19 Score=29.35 Aligned_cols=36 Identities=14% Similarity=0.222 Sum_probs=27.2
Q ss_pred CCcEEEEEechhHH-HHHHHHHHHHhcCCcEEEEEee
Q 020510 238 GKDVTITAFSKIVG-LSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 238 G~dv~Iia~G~~~~-~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
..|++||++|...+ .--+..+.|++.||.+++.|-.
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M~T~ 124 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAMDTQ 124 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEECHH
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEeCHH
Confidence 46899999996553 3345567888899999998743
No 171
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=30.11 E-value=93 Score=28.47 Aligned_cols=58 Identities=17% Similarity=0.142 Sum_probs=39.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeec-------------cCCCHHHHHHHHhCCCeEEEEec
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI-------------RPLDRSTINASVRKTNRLVTVEE 298 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l-------------~P~d~~~l~~~~~~~~~vvvvEe 298 (325)
.++.+.|++.|.......+ .+++.|+++-++|...- ...|.+.+.+++++.+ +|+.|-
T Consensus 11 ~~~~IlIlG~G~lg~~la~---aa~~lG~~viv~d~~~~~p~~~~ad~~~~~~~~d~~~l~~~~~~~d-vi~~~~ 81 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQ---SAQKMGYKVVVLDPSEDCPCRYVAHEFIQAKYDDEKALNQLGQKCD-VITYEF 81 (377)
T ss_dssp TTCEEEEECCSHHHHHHHH---HHHHTTCEEEEEESCTTCTTGGGSSEEEECCTTCHHHHHHHHHHCS-EEEESS
T ss_pred CCCEEEEECCCHHHHHHHH---HHHHCCCEEEEEECCCCChhhhhCCEEEECCCCCHHHHHHHHHhCC-cceecc
Confidence 4567999998876555444 45556999999986422 2246778888887765 567753
No 172
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=29.93 E-value=1.8e+02 Score=26.24 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=34.5
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeec-------------cCCCHHHHHHHHhCCCeEEEEe
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSI-------------RPLDRSTINASVRKTNRLVTVE 297 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l-------------~P~d~~~l~~~~~~~~~vvvvE 297 (325)
++.|++.|.. +...++.|++.|+++-++|...- ...|.+.|.+.+.+.+. |+.+
T Consensus 3 ~Ililg~g~~---g~~~~~a~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~d~-v~~~ 69 (380)
T 3ax6_A 3 KIGIIGGGQL---GKMMTLEAKKMGFYVIVLDPTPRSPAGQVADEQIVAGFFDSERIEDLVKGSDV-TTYD 69 (380)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCEEEEEESSTTCTTGGGSSEEEECCTTCHHHHHHHHHTCSE-EEES
T ss_pred EEEEECCCHH---HHHHHHHHHHCCCEEEEEeCCCCCchhhhCceEEECCCCCHHHHHHHHhcCCE-EEec
Confidence 5778887744 44455557778999888886321 22366778887766654 4443
No 173
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=29.50 E-value=1e+02 Score=28.86 Aligned_cols=56 Identities=16% Similarity=0.304 Sum_probs=36.4
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee---------------ccCCCHHHHHHH-HhCCCeEEEE
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS---------------IRPLDRSTINAS-VRKTNRLVTV 296 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~---------------l~P~d~~~l~~~-~~~~~~vvvv 296 (325)
+..++|+++|..-.. +++.|.++|+++.|||... -.+-+.+.|.++ +++.+.||+.
T Consensus 4 ~~~viIiG~Gr~G~~---va~~L~~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQI---TGRLLLSSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECCSHHHHH---HHHHHHHTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECCCHHHHH---HHHHHHHCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 346899999986554 4567888999999999531 134466666554 4455544433
No 174
>1n3y_A Integrin alpha-X; alpha/beta rossmann fold, cell adhesion; 1.65A {Homo sapiens} SCOP: c.62.1.1
Probab=29.40 E-value=59 Score=26.27 Aligned_cols=61 Identities=13% Similarity=0.092 Sum_probs=39.6
Q ss_pred HHHHHHHHhcCCcEEEEEeeecc--CCCHHHHHHHHhCCC--eEEEEecCCCCCCHHHHHHHHHc
Q 020510 254 LKAAEILAKEGISAEVINLRSIR--PLDRSTINASVRKTN--RLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 254 ~~Aa~~L~~~Gi~~~Vi~~~~l~--P~d~~~l~~~~~~~~--~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
.++++.|++.|+.+-.|-+..-. +.|.+.|.+++..++ .++.+++....-.+-..|.+.+.
T Consensus 130 ~~~~~~~~~~gi~i~~igvG~~~~~~~~~~~L~~iA~~~~g~~~~~~~~~~~l~~~~~~i~~~ic 194 (198)
T 1n3y_A 130 KDVIPMADAAGIIRYAIGVGLAFQNRNSWKELNDIASKPSQEHIFKVEDFDALKDIQNQLKEKIF 194 (198)
T ss_dssp HHHHHHHHHTTCEEEEEEESGGGGSSTTHHHHHHHSCSSSGGGEEEESSGGGGGGGHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEEccccccccccHHHHHHHHcCCCcccEEEeCCHHHHHHHHHHHHhhee
Confidence 45667788889988888776543 347888888777653 46777664433445555555543
No 175
>1nh9_A MJA10B, DNA-binding protein ALBA; 2.00A {Methanocaldococcus jannaschii} SCOP: d.68.6.1
Probab=28.69 E-value=86 Score=22.81 Aligned_cols=41 Identities=20% Similarity=0.321 Sum_probs=34.0
Q ss_pred eeCCcEEEEEechhHHHHHHHHHHHHhc---CCcEEEEEeeecc
Q 020510 236 REGKDVTITAFSKIVGLSLKAAEILAKE---GISAEVINLRSIR 276 (325)
Q Consensus 236 ~~G~dv~Iia~G~~~~~a~~Aa~~L~~~---Gi~~~Vi~~~~l~ 276 (325)
.+|+++.|=|.|.....|...++.|++. |+++.-++..|..
T Consensus 24 ~~g~eV~ikA~G~AIskAV~vaeilk~r~~~~l~v~~i~i~s~~ 67 (87)
T 1nh9_A 24 TSNDEVIIKARGKAINKAVDVAEMIRNRFIKDIKIKKIEIGTDK 67 (87)
T ss_dssp HHCSEEEEEEEGGGHHHHHHHHHHHHHHTCTTCEEEEEEEEEEC
T ss_pred cCCCEEEEEEechHHHHHHHHHHHHHHhccCCeEEEEEEEeEEE
Confidence 3567899999999999999999999876 4677777777765
No 176
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=28.67 E-value=59 Score=25.81 Aligned_cols=31 Identities=29% Similarity=0.327 Sum_probs=24.8
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLR 273 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~ 273 (325)
|++||+.|.. .+++|..|.+.|.++.|++-.
T Consensus 3 ~vvIIGgG~~---Gl~~A~~l~~~g~~v~lie~~ 33 (180)
T 2ywl_A 3 DVIVVGGGPS---GLSAALFLARAGLKVLVLDGG 33 (180)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCCEEEEECS
T ss_pred eEEEECCCHH---HHHHHHHHHHCCCcEEEEeCC
Confidence 6889988864 556777788889999999864
No 177
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=28.55 E-value=1.1e+02 Score=26.44 Aligned_cols=48 Identities=13% Similarity=0.127 Sum_probs=33.5
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHH
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV 287 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~ 287 (325)
.+++++||+.|.. ++|.|..|.+.|.+++|+.-..-...+.+...+..
T Consensus 151 ~~~~vvViGgG~i---g~e~A~~l~~~G~~Vt~v~~~~~~~~~~~~~~~~~ 198 (314)
T 4a5l_A 151 RNKVLMVVGGGDA---AMEEALHLTKYGSKVIILHRRDAFRASKTMQERVL 198 (314)
T ss_dssp TTSEEEEECSSHH---HHHHHHHHTTTSSEEEEECSSSSCCSCHHHHHHHH
T ss_pred CCCeEEEECCChH---HHHHHHHHHHhCCeeeeecccccccccchhhhhhh
Confidence 4678999998864 66778889888999999975544444444433333
No 178
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=28.43 E-value=43 Score=29.91 Aligned_cols=30 Identities=27% Similarity=0.189 Sum_probs=23.6
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
||+||+.|.. .+.+|-.|.+.|+++.|++-
T Consensus 6 DViIVGaGpa---Gl~~A~~La~~G~~V~v~Er 35 (397)
T 3oz2_A 6 DVLVVGGGPG---GSTAARYAAKYGLKTLMIEK 35 (397)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHH---HHHHHHHHHHCCCcEEEEeC
Confidence 8999998864 33456678889999999984
No 179
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=28.42 E-value=34 Score=29.29 Aligned_cols=39 Identities=15% Similarity=0.164 Sum_probs=28.3
Q ss_pred CCcEEEEEechhHHH--HHHHHHHHHhcCCcEEEEEeeecc
Q 020510 238 GKDVTITAFSKIVGL--SLKAAEILAKEGISAEVINLRSIR 276 (325)
Q Consensus 238 G~dv~Iia~G~~~~~--a~~Aa~~L~~~Gi~~~Vi~~~~l~ 276 (325)
+++++|.-+|+.... +.+.++.|++.|.++.||=-..-.
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 456888888877654 888899999999999887654433
No 180
>2bmv_A Flavodoxin; electron transport, flavoprotein, FMN, transport protein; 2.11A {Helicobacter pylori} PDB: 2w5u_A* 1fue_A*
Probab=28.40 E-value=78 Score=24.99 Aligned_cols=30 Identities=30% Similarity=0.298 Sum_probs=21.4
Q ss_pred EEEechhHHHHHHHHHHHHhc-CCcEEEEEee
Q 020510 243 ITAFSKIVGLSLKAAEILAKE-GISAEVINLR 273 (325)
Q Consensus 243 Iia~G~~~~~a~~Aa~~L~~~-Gi~~~Vi~~~ 273 (325)
+|.|++......+.|+.+.+. |. ++++++.
T Consensus 5 ~I~Y~S~tGnT~~~A~~ia~~lg~-~~~~~~~ 35 (164)
T 2bmv_A 5 GIFFGTDSGNAEAIAEKISKAIGN-AEVVDVA 35 (164)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHCS-EEEEEGG
T ss_pred EEEEECCCchHHHHHHHHHHHcCC-cEEEecc
Confidence 556888888888888877665 65 6666654
No 181
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=28.34 E-value=2.4e+02 Score=30.64 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=30.0
Q ss_pred HHHHhc--CCCcEEEee-CCHHHHHHHHHHhHhCCCcEEEE
Q 020510 167 AAWYAS--VPGLKVLSP-YSSEDARGLLKAAIRDPDPVVFL 204 (325)
Q Consensus 167 ~a~~~~--iP~~~V~~P-~d~~e~~~~l~~a~~~~~Pv~ir 204 (325)
..+..+ ++.+....+ .++.|+...++.|++.++|++|-
T Consensus 1025 ~~iA~a~G~~~va~~~v~~~~~~l~~al~eAl~~~GP~lI~ 1065 (1231)
T 2c42_A 1025 ARMVMTYGYVYVATVSMGYSKQQFLKVLKEAESFPGPSLVI 1065 (1231)
T ss_dssp HHHHHTTSSSEEEEECTTTCHHHHHHHHHHHHHSSSCEEEE
T ss_pred HHHHHHCCCCEEEEEeccCCHHHHHHHHHHHHhcCCCEEEE
Confidence 344444 566666677 59999999999999999999985
No 182
>4hqo_A Sporozoite surface protein 2; malaria, gliding motility, VWA domain, TSR domain, extensibl ribbon, receptor on sporozoite, vaccine target; HET: FUC BGC; 2.19A {Plasmodium vivax} PDB: 4hql_A* 4hqn_A*
Probab=28.09 E-value=65 Score=27.95 Aligned_cols=68 Identities=12% Similarity=0.003 Sum_probs=42.3
Q ss_pred EEEEEechhH--HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC-----CeEEEEecCCCCCCHHHHHHHHH
Q 020510 241 VTITAFSKIV--GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT-----NRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 241 v~Iia~G~~~--~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~-----~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
++||+-|..- ..+.++++.|++.|+.+-.|-+.. ..+.+.|.+++... ..++.+++- ..|.+.+...+
T Consensus 129 iIllTDG~~~d~~~~~~~a~~l~~~gi~i~~iGiG~--~~~~~~L~~iA~~~~~~g~~~~~~~~d~---~~L~~i~~~l~ 203 (266)
T 4hqo_A 129 VILMTDGVPNSKYRALEVANKLKQRNVRLAVIGIGQ--GINHQFNRLIAGCRPREPNCKFYSYADW---NEAVALIKPFI 203 (266)
T ss_dssp EEEEECSCCSCHHHHHHHHHHHHHTTCEEEEEECSS--SCCHHHHHHHHTCCTTCSSCTTEECSCH---HHHHHHHHHHH
T ss_pred EEEEccCCCCCchHHHHHHHHHHHCCCEEEEEecCc--ccCHHHHHHhhCCCCCCCCCCeEEecCH---HHHHHHHHHHH
Confidence 4455555432 367788888999998877777764 57888777766542 356666442 34555444443
No 183
>3n2n_F Anthrax toxin receptor 1; rossmann fold; 1.80A {Homo sapiens} SCOP: c.62.1.1
Probab=27.92 E-value=27 Score=27.96 Aligned_cols=55 Identities=7% Similarity=0.141 Sum_probs=37.6
Q ss_pred EEEEEechhHH----HHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEec
Q 020510 241 VTITAFSKIVG----LSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (325)
Q Consensus 241 v~Iia~G~~~~----~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe 298 (325)
++|++=|.... ...++++.+++.|+.+-.|-+. ..+.+.|.+++...++++.+++
T Consensus 110 iillTDG~~~~~~~~~~~~~~~~~~~~gi~i~~igvg---~~~~~~L~~iA~~~~~~~~~~~ 168 (185)
T 3n2n_F 110 IIALTDGELHEDLFFYSEREANRSRDLGAIVYAVGVK---DFNETQLARIADSKDHVFPVND 168 (185)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHHHHHTTEEEEEEECS---SCCHHHHTTTSSSGGGEEEHHH
T ss_pred EEEEcCCCCCCCcccchHHHHHHHHHCCCEEEEEEec---cCCHHHHHHHhCCCCCeEEecc
Confidence 45555554322 3367888899888877777765 5788888876665567777765
No 184
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=27.31 E-value=1.9e+02 Score=25.11 Aligned_cols=9 Identities=0% Similarity=0.195 Sum_probs=6.0
Q ss_pred cEEEEEech
Q 020510 240 DVTITAFSK 248 (325)
Q Consensus 240 dv~Iia~G~ 248 (325)
+++.++.|.
T Consensus 57 ~V~av~~G~ 65 (252)
T 1efp_B 57 EIIAVSIGV 65 (252)
T ss_dssp EEEEEEEES
T ss_pred eEEEEEeCC
Confidence 666677775
No 185
>4gi5_A Quinone reductase; protein structure initiative, FAD bound, structural genomics, PSI-biology; HET: FAD; 1.75A {Klebsiella pneumoniae subsp}
Probab=27.08 E-value=1e+02 Score=27.37 Aligned_cols=63 Identities=14% Similarity=0.006 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeeeccC--------------------------------C--CHHHHHHHHhCCCeEEE
Q 020510 250 VGLSLKAAEILAKEGISAEVINLRSIRP--------------------------------L--DRSTINASVRKTNRLVT 295 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P--------------------------------~--d~~~l~~~~~~~~~vvv 295 (325)
...+..+++.|++.|.+|+++|+...++ + |.....+.+...+.||+
T Consensus 39 ~aL~~~~~~~l~~~G~eV~v~DLy~~~f~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~~aD~iv~ 118 (280)
T 4gi5_A 39 GALKNFAIRHLQQAGHEVQVSDLYAMRWKAGYDADDSGAPPVGEFWRPTLDSKQAFAQGTQSADIVAEQEKLLWADTVIF 118 (280)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEETTTTTCCCSCCGGGSSSSCSSSSCCHHHHHHHHHHHTCSCHHHHHHHHHHHHCSEEEE
T ss_pred HHHHHHHHHHHHHCCCeEEEEEccccCCCCcCCHHHhcccccccccChhhHHHHHhhcCCCcHHHHHHHHHHHhCCEEEE
Confidence 3456667788888999999999975432 1 22334455667777766
Q ss_pred EecCCCCCCHHHHHHHHH
Q 020510 296 VEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 296 vEe~~~~GGlg~~v~~~l 313 (325)
.=--+ .+++-+.+..++
T Consensus 119 ~~P~~-w~~~Pa~lK~~i 135 (280)
T 4gi5_A 119 QFPLW-WFSMPAIMKGWI 135 (280)
T ss_dssp EEECB-TTBCCHHHHHHH
T ss_pred Eeccc-cccCcHHHHHHH
Confidence 65544 466666666544
No 186
>2bfd_A 2-oxoisovalerate dehydrogenase alpha subunit; oxidoreductase, multi-enzyme complex, acylation, oxidative decarboxylation, maple syrup urine disease; HET: TDP; 1.39A {Homo sapiens} SCOP: c.36.1.11 PDB: 1v16_A* 2bfc_A* 1v1r_A* 1olu_A* 2bfb_A* 1v1m_A* 2bew_A* 1dtw_A* 1olx_A* 1ols_A* 1wci_A* 1x80_A* 2beu_A* 1u5b_A* 2bev_A* 1v11_A* 1x7x_A* 1x7y_A* 1x7w_A* 1x7z_A* ...
Probab=26.98 E-value=77 Score=29.75 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=22.2
Q ss_pred CcEEE--eeCCHHHHHHHHHHhHh----CCCcEEEEe
Q 020510 175 GLKVL--SPYSSEDARGLLKAAIR----DPDPVVFLE 205 (325)
Q Consensus 175 ~~~V~--~P~d~~e~~~~l~~a~~----~~~Pv~ir~ 205 (325)
|+.++ .-.|+.++..+++.|.+ .++|++|-.
T Consensus 247 G~~~~~VdG~D~~av~~a~~~A~~~ar~~~~P~lIe~ 283 (400)
T 2bfd_A 247 GIMSIRVDGNDVFAVYNATKEARRRAVAENQPFLIEA 283 (400)
T ss_dssp TCEEEEEETTCHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred CCcEEEEeCCCHHHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 44444 33478899999988886 578998853
No 187
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=26.91 E-value=91 Score=28.43 Aligned_cols=57 Identities=19% Similarity=0.346 Sum_probs=37.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee----------------eccC---CCHHHHHHHHhCCCeEEE
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR----------------SIRP---LDRSTINASVRKTNRLVT 295 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~----------------~l~P---~d~~~l~~~~~~~~~vvv 295 (325)
+|+.++||+.|.++... ++..|...|..+.|.|.. +..+ .+.+.|.+.++..+-||+
T Consensus 176 ~gk~vvVIG~G~iVG~~--~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~~~~t~~~~t~~~~L~e~l~~ADIVIs 251 (320)
T 1edz_A 176 YGKKCIVINRSEIVGRP--LAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVIT 251 (320)
T ss_dssp TTCEEEEECCCTTTHHH--HHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEE
T ss_pred CCCEEEEECCCcchHHH--HHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhcccccccccccHhHHHHHhccCCEEEE
Confidence 46789999999876654 456677778888887542 1111 334667888888875553
No 188
>2khp_A Glutaredoxin; thioredoxin type domain, ssgcid, electron TRAN structural genomics, seattle structural genomics center for infectious disease; NMR {Brucella melitensis}
Probab=26.53 E-value=1.1e+02 Score=21.19 Aligned_cols=70 Identities=17% Similarity=0.223 Sum_probs=39.3
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-CCeEEEEecCCCCCCHHHHHHHHH
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-TNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.+++++ -.....+.++...|++.|++...+|+..- |-..+.+.+.... +-.++++ ++...||+. .+.+++
T Consensus 7 ~v~ly~-~~~C~~C~~~~~~L~~~~i~~~~~di~~~-~~~~~~l~~~~~~~~vP~l~~-~g~~i~g~~-~i~~~~ 77 (92)
T 2khp_A 7 DVIIYT-RPGCPYCARAKALLARKGAEFNEIDASAT-PELRAEMQERSGRNTFPQIFI-GSVHVGGCD-DLYALE 77 (92)
T ss_dssp CEEEEE-CTTCHHHHHHHHHHHHTTCCCEEEESTTS-HHHHHHHHHHHTSSCCCEEEE-TTEEEESHH-HHHHHH
T ss_pred cEEEEE-CCCChhHHHHHHHHHHcCCCcEEEECCCC-HHHHHHHHHHhCCCCcCEEEE-CCEEEcCHH-HHHHHH
Confidence 355543 35557788888899999999999988631 1111223333321 1124444 555667764 444444
No 189
>4hqf_A Thrombospondin-related anonymous protein, trap; malaria, parasite motility, I domain, TSR domain, receptor O sporozoite, vaccine target; 2.20A {Plasmodium falciparum} PDB: 4hqk_A 2bbx_A
Probab=26.52 E-value=89 Score=27.16 Aligned_cols=57 Identities=18% Similarity=0.053 Sum_probs=38.1
Q ss_pred EEEEEechhH--HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCC-----CeEEEEecC
Q 020510 241 VTITAFSKIV--GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKT-----NRLVTVEEG 299 (325)
Q Consensus 241 v~Iia~G~~~--~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~-----~~vvvvEe~ 299 (325)
++||+-|..- ....++++.|++.|+.+-.|-+.. ..|.+.|.+++... ..++.+++-
T Consensus 132 iillTDG~~~d~~~~~~~~~~l~~~gv~i~~igiG~--~~~~~~L~~iA~~~~~~g~~~~~~~~~~ 195 (281)
T 4hqf_A 132 VVILTDGIPDSIQDSLKESRKLSDRGVKIAVFGIGQ--GINVAFNRFLVGCHPSDGKCNLYADSAW 195 (281)
T ss_dssp EEEEESSCCSCHHHHHHHHHHHHHTTCEEEEEEESS--SCCHHHHHHHTTSCSSSSCCTTEEEECG
T ss_pred EEEEecCCCCCcHHHHHHHHHHHHCCCEEEEEeCCC--ccCHHHHHhhhCCCCCCCCCceEEecch
Confidence 4555555432 367788888998898877777664 46888887766442 356777664
No 190
>1atz_A VON willebrand factor; collagen-binding, hemostasis, dinucleotide binding fold; 1.80A {Homo sapiens} SCOP: c.62.1.1 PDB: 4dmu_B 2adf_A 1fe8_A 1ao3_A
Probab=26.46 E-value=39 Score=27.37 Aligned_cols=55 Identities=13% Similarity=0.109 Sum_probs=35.1
Q ss_pred EEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC--eEEEEec
Q 020510 242 TITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN--RLVTVEE 298 (325)
Q Consensus 242 ~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~--~vvvvEe 298 (325)
+|++.|.......++++.|++.|+.+-.|-+.. ..|.+.|..++.... .++.+++
T Consensus 113 ivltdg~~~~~~~~~~~~~~~~gi~v~~igvG~--~~~~~~L~~iA~~~~~~~~~~~~~ 169 (189)
T 1atz_A 113 VILVTDVSVDSVDAAADAARSNRVTVFPIGIGD--RYDAAQLRILAGPAGDSNVVKLQR 169 (189)
T ss_dssp EEEECSCCSSCCHHHHHHHHHTTEEEEEEEESS--SSCHHHHHHHTGGGGGGGCEEESS
T ss_pred EEEeCCCCCchHHHHHHHHHHCCCEEEEEEcCC--cCCHHHHHHHHCCCcccCEEEecC
Confidence 444444333334677788888887776666653 468888887776543 5677754
No 191
>1shu_X Anthrax toxin receptor 2; alpha/beta rossmann fold, membrane protein; 1.50A {Homo sapiens} SCOP: c.62.1.1 PDB: 1tzn_a 1sht_X 1t6b_Y*
Probab=26.23 E-value=74 Score=25.17 Aligned_cols=45 Identities=13% Similarity=0.214 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEec
Q 020510 251 GLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEE 298 (325)
Q Consensus 251 ~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe 298 (325)
....++++.+++.|+.+-.|.+. ..+.+.|.+++..++.++.+.+
T Consensus 121 ~~~~~~~~~~~~~~i~i~~igvg---~~~~~~L~~ia~~~~~~~~~~~ 165 (182)
T 1shu_X 121 SYAEKEAKISRSLGASVYCVGVL---DFEQAQLERIADSKEQVFPVKG 165 (182)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECS---SCCHHHHHHHSSSGGGEEESSS
T ss_pred hhHHHHHHHHHhCCCEEEEEeCC---cCCHHHHHHHhCCCCceEEccC
Confidence 34566778888889888877776 5688888887777777666653
No 192
>3phc_A Purine nucleoside phosphorylase; PNP,immucillin, transferase-transferase inhibitor complex; HET: IM5; 2.00A {Plasmodium falciparum} PDB: 1q1g_A* 1nw4_A* 3fow_A*
Probab=25.63 E-value=1.8e+02 Score=25.60 Aligned_cols=73 Identities=12% Similarity=-0.032 Sum_probs=45.9
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHH
Q 020510 177 KVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKA 256 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~A 256 (325)
.|+.|.||..++.+-+ . .+++..+...|. +.+..| .-+|.+++++++|.....+--+
T Consensus 19 ~vll~GdP~R~~~ia~-~--l~~~~~~~~~r~----------------~~~~tG----~~~G~~V~v~~~GiG~psaai~ 75 (275)
T 3phc_A 19 VVLVVGDPGRVDKIKV-V--CDSYVDLAYNRE----------------YKSVEC----HYKGQKFLCVSHGVGSAGCAVC 75 (275)
T ss_dssp EEEEESCHHHHHHHHT-T--SSEEEEEEEETT----------------EEEEEE----EETTEEEEEEECCSSHHHHHHH
T ss_pred EEEECCCHHHHHHHHH-H--hccCeeeeeeCC----------------eEEEEE----EECCEEEEEEECCCChHHHHHH
Confidence 6899999999887663 2 233433322111 111112 1257789999999998888888
Q ss_pred HHHHHhcCCcEEEEEee
Q 020510 257 AEILAKEGISAEVINLR 273 (325)
Q Consensus 257 a~~L~~~Gi~~~Vi~~~ 273 (325)
+++|.+-|++ .+|.+-
T Consensus 76 ~~eL~~~gv~-~iI~~G 91 (275)
T 3phc_A 76 FEELCQNGAK-VIIRAG 91 (275)
T ss_dssp HHHHHTTTCC-EEEEEE
T ss_pred HHHHHHCCCC-EEEEee
Confidence 8888777766 344443
No 193
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=25.46 E-value=1e+02 Score=27.83 Aligned_cols=33 Identities=24% Similarity=0.364 Sum_probs=23.6
Q ss_pred CCcEEEEEechhHHHHHHHHHHHHhcCC-cEEEEEee
Q 020510 238 GKDVTITAFSKIVGLSLKAAEILAKEGI-SAEVINLR 273 (325)
Q Consensus 238 G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi-~~~Vi~~~ 273 (325)
|+.++|++.| ..+..++..|.+.|. ++.|++-.
T Consensus 154 gk~~lVlGaG---G~g~aia~~L~~~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 154 GKKMTICGAG---GAATAICIQAALDGVKEISIFNRK 187 (315)
T ss_dssp TSEEEEECCS---HHHHHHHHHHHHTTCSEEEEEECS
T ss_pred CCEEEEECCC---hHHHHHHHHHHHCCCCEEEEEECC
Confidence 5678888887 335556677888898 78887654
No 194
>3lcm_A SMU.1420, putative oxidoreductase; NADPH:quinone oxidoreductase, MDAB; HET: FAD NAP; 1.80A {Streptococcus mutans} PDB: 4f8y_A*
Probab=24.99 E-value=1e+02 Score=25.43 Aligned_cols=62 Identities=11% Similarity=0.109 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEeeecc--CC----------------CHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHH
Q 020510 250 VGLSLKAAEILAKEGISAEVINLRSIR--PL----------------DRSTINASVRKTNRLVTVEEGFPQHGVGAEIWC 311 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~--P~----------------d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~ 311 (325)
...+..+++.| +.|.+++++|+.... |. |.+.+.+.++..+.||+.=--+ .+++-..+..
T Consensus 17 ~~l~~~~~~~~-~~g~~v~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~l~~AD~iV~~~P~y-~~~~pa~LK~ 94 (196)
T 3lcm_A 17 AEILKQVQTNL-SKEHTVSTLDLYAEHFDPVLQFNETHKRRDLAKVAEMEKYRDLVTWADHLIFIFPIW-WSGMPAILKG 94 (196)
T ss_dssp HHHHHHHHHHS-CTTSEEEEEETTTTTCCCCCCCCSSSCGGGGGGCGGGHHHHHHHHHCSEEEEEEECB-TTBCCHHHHH
T ss_pred HHHHHHHHHHh-cCCCeEEEEEcccCCCCccCChHHHHhhcCCCCcHHHHHHHHHHHhCCEEEEECchh-hccccHHHHH
Confidence 34555556666 679999999998664 31 2345666777888776665444 5777776665
Q ss_pred HH
Q 020510 312 AF 313 (325)
Q Consensus 312 ~l 313 (325)
++
T Consensus 95 ~i 96 (196)
T 3lcm_A 95 FI 96 (196)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 195
>3qmx_A Glutaredoxin A, glutaredoxin 3; electron transport; 1.82A {Synechocystis SP} SCOP: c.47.1.0
Probab=24.80 E-value=75 Score=23.10 Aligned_cols=71 Identities=13% Similarity=0.187 Sum_probs=42.2
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHH-hC-CCeEEEEecCCCCCCHHHHHHHHH
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV-RK-TNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~-~~-~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.+++|.+ -.....+.+|.+.|++.|++.+.+|+..-.+. .+.+.+.. .. +-..++++ +...||+.. +.+..
T Consensus 16 ~~v~vy~-~~~Cp~C~~ak~~L~~~~i~y~~idI~~~~~~-~~~l~~~~~g~~~vP~ifi~-g~~igG~d~-l~~~~ 88 (99)
T 3qmx_A 16 AKIEIYT-WSTCPFCMRALALLKRKGVEFQEYCIDGDNEA-REAMAARANGKRSLPQIFID-DQHIGGCDD-IYALD 88 (99)
T ss_dssp CCEEEEE-CTTCHHHHHHHHHHHHHTCCCEEEECTTCHHH-HHHHHHHTTTCCCSCEEEET-TEEEESHHH-HHHHH
T ss_pred CCEEEEE-cCCChhHHHHHHHHHHCCCCCEEEEcCCCHHH-HHHHHHHhCCCCCCCEEEEC-CEEEeChHH-HHHHH
Confidence 4566665 45567899999999999999999998752111 12233222 11 11345554 455788754 44343
No 196
>1d4a_A DT-diaphorase, quinone reductase; flavoprotein, rossman fold, oxidoreductase; HET: FAD; 1.70A {Homo sapiens} SCOP: c.23.5.3 PDB: 1dxo_A* 1gg5_A* 1kbo_A* 1kbq_A* 2f1o_A* 3jsx_A* 1h69_A* 1h66_A* 1qbg_A* 1dxq_A* 1qrd_A*
Probab=24.80 E-value=1.2e+02 Score=26.49 Aligned_cols=64 Identities=20% Similarity=0.135 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHhcCCcEEEEEeeecc--C-------------------------------C--CHHHHHHHHhCCCeE
Q 020510 249 IVGLSLKAAEILAKEGISAEVINLRSIR--P-------------------------------L--DRSTINASVRKTNRL 293 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~--P-------------------------------~--d~~~l~~~~~~~~~v 293 (325)
....+..+++.|++.|.+++++|+.... | + |.+.+.+.+...+.|
T Consensus 18 t~~la~~~~~~l~~~g~eV~~~dL~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~~~~~~~l~~AD~I 97 (273)
T 1d4a_A 18 NYAMKEAAAAALKKKGWEVVESDLYAMNFNPIISRKDITGKLKDPANFQYPAESVLAYKEGHLSPDIVAEQKKLEAADLV 97 (273)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEETTTTTCCCCCCGGGBCSCCSSTTSCCHHHHHHHHHHHTCBCHHHHHHHHHHHHCSEE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEEccccCCCCcCCHHHHHhhccCcccccchhhhhhhhhcccCcHHHHHHHHHHHhCCEE
Confidence 4456666777888889999999998654 1 1 222344446677776
Q ss_pred EEEecCCCCCCHHHHHHHHH
Q 020510 294 VTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 294 vvvEe~~~~GGlg~~v~~~l 313 (325)
|+.=--+ .+++-+.+..++
T Consensus 98 V~~~P~y-~~s~Pa~LK~~i 116 (273)
T 1d4a_A 98 IFQFPLQ-WFGVPAILKGWF 116 (273)
T ss_dssp EEEEECB-TTBCCHHHHHHH
T ss_pred EEECchh-hccCCHHHHHHH
Confidence 6655544 577777776554
No 197
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=24.80 E-value=69 Score=25.60 Aligned_cols=28 Identities=7% Similarity=0.092 Sum_probs=17.8
Q ss_pred chhHHHHHHHHHHHHhcCCcEEEEEeee
Q 020510 247 SKIVGLSLKAAEILAKEGISAEVINLRS 274 (325)
Q Consensus 247 G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~ 274 (325)
|..-..|...++.|.+.|++++++++..
T Consensus 21 GnT~~~A~~ia~~l~~~g~~v~~~~~~~ 48 (167)
T 1ykg_A 21 GNARRVAEALRDDLLAAKLNVKLVNAGD 48 (167)
T ss_dssp SHHHHHHHHHHHHHHHHTCCCEEEEGGG
T ss_pred hHHHHHHHHHHHHHHHCCCceEEeehhh
Confidence 3444555555566666688888887754
No 198
>3pm9_A Putative oxidoreductase; putative D-2-hydroxyglutarate dehydrogenase, putative D-LACT dehydrogenase; HET: FAD; 2.57A {Rhodopseudomonas palustris}
Probab=24.77 E-value=2.1e+02 Score=27.33 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=51.1
Q ss_pred CCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEEeCcc-ccCcccCccccccCCCcccc---CCceEEeeeCCcEEEEEech
Q 020510 173 VPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENEL-LYGESFPVSAEVLDSSFCLP---IGKAKIEREGKDVTITAFSK 248 (325)
Q Consensus 173 iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~~-l~~~~~p~~~~~~~~~~~~~---~gk~~vl~~G~dv~Iia~G~ 248 (325)
.|. .|+.|.+.+|+..++++|.+++-|++++-... +.+...|. .....+. +.+...+.+....+.+..|.
T Consensus 51 ~p~-~vv~P~s~eeV~~~v~~a~~~~~pv~~~GgGt~~~g~~~~~-----~ggvvIdl~~m~~i~~id~~~~~v~V~aGv 124 (476)
T 3pm9_A 51 HSP-LVLRPGSTEEVVAICKLANEARVALVPQGGNTGLVGGQTPH-----NGEVVISLKRMDKIREIDTSSNTITVEAGA 124 (476)
T ss_dssp CCS-CEECCCSHHHHHHHHHHHHHHTCCEEEESSSCCSSSTTCCC-----SSCEEEECTTCCCEEEEETTTTEEEEETTC
T ss_pred CCC-EEEecCCHHHHHHHHHHHHHcCCeEEEEeCCCCCCCCccCC-----CCcEEEEeeCCCceEEEcCCCCeEEECCCc
Confidence 444 58899999999999999999999999984321 11111110 0111122 22222233455677788898
Q ss_pred hHHHHHHHHHHHHhcCC
Q 020510 249 IVGLSLKAAEILAKEGI 265 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~Gi 265 (325)
......++ |.++|.
T Consensus 125 ~~~~l~~~---l~~~Gl 138 (476)
T 3pm9_A 125 ILQRVQEK---AAEVDR 138 (476)
T ss_dssp BHHHHHHH---HHHTTE
T ss_pred CHHHHHHH---HHHhCC
Confidence 88877665 445664
No 199
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=24.76 E-value=2e+02 Score=25.67 Aligned_cols=22 Identities=9% Similarity=0.125 Sum_probs=12.2
Q ss_pred CHHHHHHHHhCCCeEEEEecCC
Q 020510 279 DRSTINASVRKTNRLVTVEEGF 300 (325)
Q Consensus 279 d~~~l~~~~~~~~~vvvvEe~~ 300 (325)
|.+.|.+++++++.++++||-.
T Consensus 156 ~l~~i~~l~~~~~~~li~Dea~ 177 (411)
T 3nnk_A 156 PLAELGEICRRYDALFYTDATA 177 (411)
T ss_dssp CCTTHHHHHHHHTCEEEEECTT
T ss_pred cHHHHHHHHHHcCCEEEEECCc
Confidence 3445666666665555555543
No 200
>1uxy_A MURB, uridine diphospho-N-acetylenolpyruvylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP; HET: FAD EPU; 1.80A {Escherichia coli} SCOP: d.145.1.2 d.146.1.1 PDB: 1mbb_A* 1mbt_A* 2q85_A* 2mbr_A*
Probab=24.30 E-value=2.3e+02 Score=25.83 Aligned_cols=75 Identities=11% Similarity=0.040 Sum_probs=44.3
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccc--cCCceEEeeeCC-cEEEEEechhHHHH
Q 020510 177 KVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCL--PIGKAKIEREGK-DVTITAFSKIVGLS 253 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~--~~gk~~vl~~G~-dv~Iia~G~~~~~a 253 (325)
.++.|.|.+|+..+++++.+.+.|++++-... +.-....+ ....+ .+.+...+.+.. ..+.+..|...+..
T Consensus 17 ~~v~p~s~eel~~~l~~a~~~~~pv~vlGgGS----nll~~d~~--~GvVI~l~~~~i~~i~~~~~~~v~vgAG~~~~~l 90 (340)
T 1uxy_A 17 HIVCAEDEQQLLNAWQYATAEGQPVLILGEGS----NVLFLEDY--RGTVIINRIKGIEIHDEPDAWYLHVGAGENWHRL 90 (340)
T ss_dssp EEEEESSHHHHHHHHHHHHHTTCCEEEESSCT----TEEECSCE--EEEEEEECCCCEEEEECSSEEEEEEETTSBHHHH
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCCEEEECCCc----CCcccCCC--CeEEEEccCCCcEEEecCCCeEEEEecCCCHHHH
Confidence 58899999999999999999889999873211 00000000 00011 122333333344 35667778888776
Q ss_pred HHHH
Q 020510 254 LKAA 257 (325)
Q Consensus 254 ~~Aa 257 (325)
.+.+
T Consensus 91 ~~~~ 94 (340)
T 1uxy_A 91 VKYT 94 (340)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6554
No 201
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=24.01 E-value=1.9e+02 Score=21.50 Aligned_cols=48 Identities=25% Similarity=0.342 Sum_probs=28.5
Q ss_pred EEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCC
Q 020510 241 VTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTN 291 (325)
Q Consensus 241 v~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~ 291 (325)
++|+....--....+-.+.+++.|.++.-+..+. .+ .+.|.++++++.
T Consensus 3 ivivvfstdeetlrkfkdiikkngfkvrtvrspq--el-kdsieelvkkyn 50 (134)
T 2l69_A 3 IVIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQ--EL-KDSIEELVKKYN 50 (134)
T ss_dssp EEEEECCCCHHHHHHHHHHHHHTTCEEEEECSHH--HH-HHHHHHHTTCCC
T ss_pred EEEEEEeCCHHHHHHHHHHHHhcCceEEEecCHH--HH-HHHHHHHHHHhC
Confidence 4555555555556666667777887776543322 11 245777777775
No 202
>3ndc_A Precorrin-4 C(11)-methyltransferase; SAH; HET: SAH; 2.00A {Rhodobacter capsulatus} PDB: 3nei_A
Probab=23.98 E-value=36 Score=29.96 Aligned_cols=108 Identities=14% Similarity=0.019 Sum_probs=50.2
Q ss_pred CcEEEe--eCCHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEe-eeCCcEEEEEechhHH
Q 020510 175 GLKVLS--PYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIE-REGKDVTITAFSKIVG 251 (325)
Q Consensus 175 ~~~V~~--P~d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl-~~G~dv~Iia~G~~~~ 251 (325)
+-.++. |.+.++....+....+....|.+..... +-+++.-... .+.+ ..|-++.+| -|....
T Consensus 51 ~~~~~~~~~~~~~~~~~~i~~~~~~G~~Va~L~~GD---------P~iyg~~~~l----~~~l~~~gi~vevi-PGiSs~ 116 (264)
T 3ndc_A 51 GAKIVNTAPMSLDAIIDTIAEAHAAGQDVARLHSGD---------LSIWSAMGEQ----LRRLRALNIPYDVT-PGVPSF 116 (264)
T ss_dssp TCEEEECTTSCHHHHHHHHHHHHHHTCCEEEEESBC---------TTSSCSHHHH----HHHHHHTTCCEEEE-CCCCHH
T ss_pred CCEEEecCCCCHHHHHHHHHHHHHCCCeEEEEeCCC---------CccccHHHHH----HHHHHhCCCCEEEe-CCHHHH
Confidence 444443 4456666666666666667777653211 1121110000 0111 224566666 476665
Q ss_pred HHHHHHHHHHh----cC--CcEEEEEeeec-cCCCH-HHHHHHHhCCCeEEEEec
Q 020510 252 LSLKAAEILAK----EG--ISAEVINLRSI-RPLDR-STINASVRKTNRLVTVEE 298 (325)
Q Consensus 252 ~a~~Aa~~L~~----~G--i~~~Vi~~~~l-~P~d~-~~l~~~~~~~~~vvvvEe 298 (325)
.+..| .+.- .+ .++.+++++-. .|++. +.+..+++....+++++.
T Consensus 117 ~aaaA--~lG~plt~~~~~~~~~~~s~~~~~~~~~~~~~l~~l~~~~~tlvl~~~ 169 (264)
T 3ndc_A 117 AAAAA--TLGAELTLPGVAQSVILTRTSGRASAMPAGETLENFARTGAVLAIHLS 169 (264)
T ss_dssp HHHHH--HHTCCSCBTTTBCCEEEEECCTTTCCCCTTCCHHHHHTTTCEEEEESC
T ss_pred HHHHH--HhCCCccCCCceeEEEEEeccCCCCCcchHHHHHHHhcCCCcEEEecC
Confidence 55333 2321 12 24455555433 34443 345655555556676664
No 203
>3mb8_A Purine nucleoside phosphorylase; PNP, immucillin H, IMMH, TR; HET: IMH; 1.90A {Toxoplasma gondii}
Probab=23.44 E-value=2.1e+02 Score=25.23 Aligned_cols=73 Identities=12% Similarity=-0.045 Sum_probs=46.0
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCccccCCceEEeeeCCcEEEEEechhHHHHHHH
Q 020510 177 KVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLPIGKAKIEREGKDVTITAFSKIVGLSLKA 256 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~~gk~~vl~~G~dv~Iia~G~~~~~a~~A 256 (325)
.|+.|.||..++.+-. . .+++..+...|. +.+..| .-+|.+++++++|.....+--+
T Consensus 23 ~vll~GdP~R~~~iA~-~--l~~~~~~~~~r~----------------~~~ytG----~~~G~~V~v~~~GiG~psaai~ 79 (279)
T 3mb8_A 23 VVIIVGDPARTEEVAN-M--CEKKQELAYNRE----------------YRSFRV----VYDSQPITVISHGIGCPGTSIA 79 (279)
T ss_dssp EEEEESSHHHHHHHHT-T--SSEEEEEEEETT----------------EEEEEE----EETTEEEEEEECCSSHHHHHHH
T ss_pred EEEECCCHHHHHHHHH-H--hccceeeeeecC----------------eEEEEE----EECCEEEEEEECCCCHHHHHHH
Confidence 6999999999887652 2 233443322211 111111 1257789999999998888878
Q ss_pred HHHHHhcCCcEEEEEee
Q 020510 257 AEILAKEGISAEVINLR 273 (325)
Q Consensus 257 a~~L~~~Gi~~~Vi~~~ 273 (325)
+++|.+-|.+ .+|.+-
T Consensus 80 ~~eLi~~gv~-~iIriG 95 (279)
T 3mb8_A 80 IEELAYLGAK-VIIRAG 95 (279)
T ss_dssp HHHHHHTTCC-EEEEEE
T ss_pred HHHHHHCCCC-EEEEee
Confidence 8888777766 344443
No 204
>3le1_A Phosphotransferase system, HPR-related proteins; HPR PTS phosphotransfer, kinase; 1.51A {Thermoanaerobacter tengcongensis} SCOP: d.94.1.0 PDB: 3le3_A 3lnw_A 3lfg_A 3le5_A
Probab=23.20 E-value=93 Score=22.47 Aligned_cols=30 Identities=20% Similarity=0.092 Sum_probs=25.5
Q ss_pred eeeCCcEEEEEechhHHHHHHHHHHHHhcC
Q 020510 235 EREGKDVTITAFSKIVGLSLKAAEILAKEG 264 (325)
Q Consensus 235 l~~G~dv~Iia~G~~~~~a~~Aa~~L~~~G 264 (325)
++.|..++|.+.|.-..+|+++...|-+++
T Consensus 55 ~~~G~~i~i~a~G~De~~A~~~l~~l~~~~ 84 (88)
T 3le1_A 55 VSQGNVVKLSAEGDDEEEAIKALVDLIESK 84 (88)
T ss_dssp CCTTCEEEEEEESTTHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEEeCCCHHHHHHHHHHHHHhc
Confidence 367889999999999999999988876654
No 205
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=23.16 E-value=1.3e+02 Score=24.98 Aligned_cols=54 Identities=17% Similarity=0.286 Sum_probs=36.5
Q ss_pred HHHhc--CCcEEEEEeeeccC---------CC-H--HHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 259 ILAKE--GISAEVINLRSIRP---------LD-R--STINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 259 ~L~~~--Gi~~~Vi~~~~l~P---------~d-~--~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.|++. |.+++++|+..+.+ ++ . +.+.+.+...+.||+.---+ .+++...+..++
T Consensus 41 ~l~~~~~g~eve~idL~d~~l~~~~~~~~~~~~~~~~~~~~~i~~AD~ivi~sP~Y-~~~~~~~lK~~i 108 (191)
T 3k1y_A 41 AVSARGEALSVSTIELSELIPDLMTAMTTRVHTTKLEEITSALSASDGLVVATPVF-KASYTGLFKMFF 108 (191)
T ss_dssp HHHHTTCCEEEEEEEGGGCHHHHTTTTSSSCCCHHHHHHHHHHHHCSEEEEEEECB-TTBSCHHHHHHH
T ss_pred HHHhcCCCceEEEEEHHhCCCcccChhhcCCCCHHHHHHHHHHHHCCEEEEEcCcc-CCcCcHHHHHHH
Confidence 56666 78999999986641 12 2 34666777787777665555 578877776655
No 206
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=22.45 E-value=83 Score=27.36 Aligned_cols=30 Identities=17% Similarity=0.262 Sum_probs=23.2
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
|++||+.|+. .+.||..|++.|.++.||+-
T Consensus 8 DvvIIG~GpA---Gl~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 8 DIAIIGAGPA---GMTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEEECCSHH---HHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHH---HHHHHHHHHHCCCCEEEEec
Confidence 8999998854 34456667778999999973
No 207
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=22.39 E-value=1.5e+02 Score=26.48 Aligned_cols=24 Identities=13% Similarity=0.149 Sum_probs=15.9
Q ss_pred CCHHHHHHHHhCCCeEEEEecCCC
Q 020510 278 LDRSTINASVRKTNRLVTVEEGFP 301 (325)
Q Consensus 278 ~d~~~l~~~~~~~~~vvvvEe~~~ 301 (325)
.|.+.|.+++++++.++++|+-+.
T Consensus 176 ~~l~~i~~la~~~~~~li~D~a~~ 199 (400)
T 3vax_A 176 QPVAELAQQLRATPTYLHVDAAQG 199 (400)
T ss_dssp CCHHHHHHHHTTSSCEEEEECTTT
T ss_pred CcHHHHHHHHHhcCCEEEEEhhhh
Confidence 466777777777766666666543
No 208
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=22.26 E-value=1.8e+02 Score=27.04 Aligned_cols=57 Identities=12% Similarity=0.076 Sum_probs=38.1
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCC
Q 020510 240 DVTITAFSK-IVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQ 302 (325)
Q Consensus 240 dv~Iia~G~-~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~ 302 (325)
++. |.+|. ....|++.++.|+++|+.+.+......+ + . ...-+....|+.+.+....
T Consensus 338 ~v~-v~~~~~~~~~a~~~a~~LR~~G~~v~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~~ 395 (400)
T 3od1_A 338 QTC-ILFSNERRFEAIELARKKRANGEAVVLQDLAGVT--D--V-DAMSSNYQDVIYCIGTAGR 395 (400)
T ss_dssp CEE-EEECGGGHHHHHHHHHHHHTTTCCEEEEEGGGCS--C--H-HHHHTTSSEEEEECSCC--
T ss_pred eEE-EEECcHHHHHHHHHHHHHHHCCCEEEEEecCChh--H--H-HHHHcCCCEEEEEecCCCC
Confidence 454 45664 4678999999999999999997776542 2 1 2223456778888776543
No 209
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=22.25 E-value=74 Score=26.70 Aligned_cols=54 Identities=17% Similarity=0.204 Sum_probs=31.7
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee--------------ccCCCHHHHHHH-HhCCCeEEEE
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS--------------IRPLDRSTINAS-VRKTNRLVTV 296 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~--------------l~P~d~~~l~~~-~~~~~~vvvv 296 (325)
..++|+++|... ...++.|.++|. +.+++-.. -.+.|.+.|.+. +++.+.|++.
T Consensus 10 ~~viI~G~G~~G---~~la~~L~~~g~-v~vid~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 10 RHVVICGWSEST---LECLRELRGSEV-FVLAEDENVRKKVLRSGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp CEEEEESCCHHH---HHHHHHSTTSEE-EEEESCGGGHHHHHHTTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CEEEEECCChHH---HHHHHHHHhCCe-EEEEECCHHHHHHHhcCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 468888887544 455667777787 77776321 134455666554 4555555443
No 210
>2e0n_A Precorrin-2 C20-methyltransferase; cobalt-factor II, tetrapyrrole, S-adenosylmethi transferase; HET: SAH; 2.00A {Chlorobaculum tepidum} PDB: 2e0k_A*
Probab=22.02 E-value=44 Score=29.07 Aligned_cols=20 Identities=5% Similarity=0.139 Sum_probs=13.3
Q ss_pred HHHHHHHhCCCeEEEEecCC
Q 020510 281 STINASVRKTNRLVTVEEGF 300 (325)
Q Consensus 281 ~~l~~~~~~~~~vvvvEe~~ 300 (325)
+.|.+.++....+++++...
T Consensus 164 ~~l~~~~~~~~t~vl~~~~~ 183 (259)
T 2e0n_A 164 GELERALVTHSTVVVMKLST 183 (259)
T ss_dssp HHHHHHHTTCSEEEECCTTS
T ss_pred HHHHHHhhcCCEEEEEcccc
Confidence 55667776666677777654
No 211
>2qbu_A Precorrin-2 methyltransferase; HET: SAH; 2.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=21.93 E-value=44 Score=28.35 Aligned_cols=32 Identities=9% Similarity=0.063 Sum_probs=17.1
Q ss_pred HHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCC
Q 020510 282 TINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPA 317 (325)
Q Consensus 282 ~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~ 317 (325)
.+.+.++....+++.+... --..+++.|.+.+
T Consensus 161 ~l~~~~~~~~t~vl~~~~~----~~~~i~~~L~~~g 192 (232)
T 2qbu_A 161 RFERVLRDVDACVIMKTSR----HGRRAMEVVESDP 192 (232)
T ss_dssp HHHHHGGGCSEEEESSHHH----HHHHHHHHHHHSS
T ss_pred HHHHHhhcCCeEEEEcccC----cHHHHHHHHHhcC
Confidence 4556665555555554322 2356666666554
No 212
>3rhb_A ATGRXC5, glutaredoxin-C5, chloroplastic; thioredoxin fold, thiol-disulfide oxidoreductase, glutaredox oxidoreductase; HET: GSH; 1.20A {Arabidopsis thaliana} PDB: 3rhc_A* 3fz9_A* 3fza_A*
Probab=21.92 E-value=1.2e+02 Score=22.18 Aligned_cols=67 Identities=16% Similarity=0.208 Sum_probs=42.4
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhC-----CCeEEEEecCCCCCCHHHH
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRK-----TNRLVTVEEGFPQHGVGAE 308 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~-----~~~vvvvEe~~~~GGlg~~ 308 (325)
.++++++. +....+.+|.+.|++.|++...+|+....|-+. .+.+.+++ +-..+++ ++...||+...
T Consensus 19 ~~v~vy~~-~~Cp~C~~~~~~L~~~~i~~~~~di~~~~~~~~-~~~~~l~~~~g~~tvP~ifi-~g~~igG~~~~ 90 (113)
T 3rhb_A 19 NTVVIYSK-TWCSYCTEVKTLFKRLGVQPLVVELDQLGPQGP-QLQKVLERLTGQHTVPNVFV-CGKHIGGCTDT 90 (113)
T ss_dssp SSEEEEEC-TTCHHHHHHHHHHHHTTCCCEEEEGGGSTTHHH-HHHHHHHHHHSCCSSCEEEE-TTEEEESHHHH
T ss_pred CCEEEEEC-CCChhHHHHHHHHHHcCCCCeEEEeecCCCChH-HHHHHHHHHhCCCCcCEEEE-CCEEEcCcHHH
Confidence 45666654 667889999999999999999999886533222 22332321 1134555 44557887544
No 213
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=21.90 E-value=2e+02 Score=23.64 Aligned_cols=30 Identities=17% Similarity=0.038 Sum_probs=22.1
Q ss_pred cEEEEEechhHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 240 DVTITAFSKIVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 240 dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
+++|+++|.+-. ..++.|.++|.++.++|.
T Consensus 2 ~iiIiG~G~~G~---~la~~L~~~g~~v~vid~ 31 (218)
T 3l4b_C 2 KVIIIGGETTAY---YLARSMLSRKYGVVIINK 31 (218)
T ss_dssp CEEEECCHHHHH---HHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCHHHH---HHHHHHHhCCCeEEEEEC
Confidence 477888776544 455678788999999983
No 214
>2y3s_A TAML; oxidoreductase; HET: FAD TIR; 1.67A {Streptomyces SP} PDB: 2y3r_A* 2y08_A* 2y4g_A*
Probab=21.65 E-value=3.3e+02 Score=26.27 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=49.5
Q ss_pred CCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEEeCccccCcccCccccccCCCcccc---CCceEEeeeCCcEEEEEechh
Q 020510 173 VPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLENELLYGESFPVSAEVLDSSFCLP---IGKAKIEREGKDVTITAFSKI 249 (325)
Q Consensus 173 iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~~~~l~~~~~p~~~~~~~~~~~~~---~gk~~vl~~G~dv~Iia~G~~ 249 (325)
.|. .|+.|.+.+|+..+++.|.+.+-|+.+|-...-+.... ... .....+. +.+.+ +.+....+.|..|..
T Consensus 58 ~p~-~vv~p~s~~dv~~~v~~a~~~~~~v~v~ggGh~~~g~~---~~~-~~gvvIdl~~l~~i~-~d~~~~~v~v~aG~~ 131 (530)
T 2y3s_A 58 DPE-EIHLVGSAAEIEQVLSRAVRSGKRVAVRSGGHCYEDFV---ANS-DVRVVMDMSRLSAVG-FDEERGAFAVEAGAT 131 (530)
T ss_dssp CCS-EEEECCSHHHHHHHHHHHHHTTCCEEEESSCCCSSSTT---TCT-TCCEEEECTTCCCEE-EETTTTEEEEETTCB
T ss_pred CCC-EEEecCCHHHHHHHHHHHHHcCCcEEEECCCCCCCCCc---ccC-CCeEEEEcccCCCEE-EcCCCCEEEEeCCCC
Confidence 344 68899999999999999999999999985432110000 000 0111111 22232 233446788889999
Q ss_pred HHHHHHHHH
Q 020510 250 VGLSLKAAE 258 (325)
Q Consensus 250 ~~~a~~Aa~ 258 (325)
..++.+++.
T Consensus 132 ~~~l~~~l~ 140 (530)
T 2y3s_A 132 LGAVYKTLF 140 (530)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 988877664
No 215
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=21.51 E-value=2e+02 Score=23.81 Aligned_cols=64 Identities=9% Similarity=-0.009 Sum_probs=39.8
Q ss_pred hHHHHHHHHHHHHhc--CCcEEEEEeeecc-C-CCH--------------------------HHHHHHHhCCCeEEEEec
Q 020510 249 IVGLSLKAAEILAKE--GISAEVINLRSIR-P-LDR--------------------------STINASVRKTNRLVTVEE 298 (325)
Q Consensus 249 ~~~~a~~Aa~~L~~~--Gi~~~Vi~~~~l~-P-~d~--------------------------~~l~~~~~~~~~vvvvEe 298 (325)
....+..+++.|+++ |.+++++|+.... | ++. +.+.+.++..+.||+.--
T Consensus 22 s~~l~~~~~~~~~~~~~g~ev~~~dL~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aD~iv~~~P 101 (211)
T 3p0r_A 22 SVKLYEAFLASYKEAHPNDTVVELDLYKEELPYVGVDMINGTFKAGKGFDLTEEEAKAVAVADKYLNQFLEADKVVFGFP 101 (211)
T ss_dssp HHHHHHHHHHHHHHHCTTSEEEEEEGGGSCCCCCCHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHCSEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEEECCCCCCCcCCHHHHHhhhccCccccCCHHHHhhHHHHHHHHHHHHhCCEEEEEcC
Confidence 345556677778776 8999999997532 3 332 223445666777666655
Q ss_pred CCCCCCHHHHHHHHH
Q 020510 299 GFPQHGVGAEIWCAF 313 (325)
Q Consensus 299 ~~~~GGlg~~v~~~l 313 (325)
-+ .+++-..+..++
T Consensus 102 ~y-~~~~p~~lK~~i 115 (211)
T 3p0r_A 102 LW-NLTIPAVLHTYI 115 (211)
T ss_dssp CB-TTBCCHHHHHHH
T ss_pred hh-cccCCHHHHHHH
Confidence 44 577777666544
No 216
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=21.46 E-value=2.4e+02 Score=24.81 Aligned_cols=22 Identities=9% Similarity=0.016 Sum_probs=13.8
Q ss_pred CHHHHHHHHhCCCeEEEEecCC
Q 020510 279 DRSTINASVRKTNRLVTVEEGF 300 (325)
Q Consensus 279 d~~~l~~~~~~~~~vvvvEe~~ 300 (325)
|.+.|.+++++++.++++||-.
T Consensus 166 ~l~~i~~l~~~~~~~li~De~~ 187 (393)
T 3kgw_A 166 PLDGFGELCHRYQCLLLVDSVA 187 (393)
T ss_dssp CCTTHHHHHHHTTCEEEEECTT
T ss_pred cHHHHHHHHHHcCCEEEEECCc
Confidence 4456667777776666666644
No 217
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=21.42 E-value=85 Score=28.16 Aligned_cols=70 Identities=11% Similarity=0.120 Sum_probs=40.1
Q ss_pred CcEEEEEechh--HHHHHHHHHHHHhcCC-cEEEEEeeecc-CCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHc
Q 020510 239 KDVTITAFSKI--VGLSLKAAEILAKEGI-SAEVINLRSIR-PLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFF 314 (325)
Q Consensus 239 ~dv~Iia~G~~--~~~a~~Aa~~L~~~Gi-~~~Vi~~~~l~-P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~ 314 (325)
.++++|.+-+. -....+..+.+++.|+ ++++++++... +.|. .+.+.++..+.|+ + .||=-..+...+.
T Consensus 57 ~~I~~IptAs~~~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~-~~~~~l~~ad~I~-v-----~GGnt~~l~~~l~ 129 (291)
T 3en0_A 57 AIIGIIPSASREPLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDS-GYRLFVEQCTGIF-M-----TGGDQLRLCGLLA 129 (291)
T ss_dssp CEEEEECTTCSSHHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCH-HHHHHHHHCSEEE-E-----CCSCHHHHHHHHT
T ss_pred CeEEEEeCCCCChHHHHHHHHHHHHHcCCCeeEEEEecCccccCCH-HHHHHHhcCCEEE-E-----CCCCHHHHHHHHH
Confidence 57888855332 2233344455666698 78999887653 4444 4556777776554 3 4554444444444
Q ss_pred C
Q 020510 315 P 315 (325)
Q Consensus 315 ~ 315 (325)
+
T Consensus 130 ~ 130 (291)
T 3en0_A 130 D 130 (291)
T ss_dssp T
T ss_pred h
Confidence 3
No 218
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=21.41 E-value=1.2e+02 Score=21.94 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=27.6
Q ss_pred hcCCCcEEEeeCCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 171 ASVPGLKVLSPYSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 171 ~~iP~~~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
-.-||-.+-...+.+|.+++++.+-++..|.+++.
T Consensus 24 hnypgryirtatssqdirdiiksmkdngkplvvfv 58 (112)
T 2lnd_A 24 HNYPGRYIRTATSSQDIRDIIKSMKDNGKPLVVFV 58 (112)
T ss_dssp HHSCTTTEEEECSHHHHHHHHHHHTTCCSCEEEEE
T ss_pred cCCCCceeeeccchhhHHHHHHHHHhcCCeEEEEe
Confidence 34688888888999999999988777777877753
No 219
>3svl_A Protein YIEF; E. coli CHRR enzyme, chromate bioremediation, tetramer role, mutant enzymes, oxidoreductase; HET: FMN; 2.20A {Escherichia coli}
Probab=21.38 E-value=76 Score=26.28 Aligned_cols=63 Identities=14% Similarity=0.258 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhcCCcEE-EEEeeeccCCCH------------HHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 250 VGLSLKAAEILAKEGISAE-VINLRSIRPLDR------------STINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 250 ~~~a~~Aa~~L~~~Gi~~~-Vi~~~~l~P~d~------------~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
.....+++..+.++|.+++ ++|+..+-.++. +.+.+.++..+.||+.---+ .+++...+..++
T Consensus 20 t~~l~~~~~~~~~~g~~v~~~idL~~lP~~~~~~~~~~~~~~~~~~l~~~i~~AD~iv~~sP~y-~~~~~~~lK~~i 95 (193)
T 3svl_A 20 NGMVARTLPKIAPASMEVNALPSIADIPLYDADVQQEEGFPATVEALAEQIRQADGVVIVTPEY-NYSVPGGLKNAI 95 (193)
T ss_dssp HHHHHHHGGGTSCTTEEEEECCCSTTCCCCCHHHHHHTCSCHHHHHHHHHHHHSSEEEEEECCB-TTBCCHHHHHHH
T ss_pred HHHHHHHHHHHccCCCEEEEEEeHHHCCCCCcccccccCCCHHHHHHHHHHHHCCEEEEEeccc-CCCCCHHHHHHH
Confidence 3333344333434578888 888877532332 23556677777766665444 466665555443
No 220
>1hsk_A UDP-N-acetylenolpyruvoylglucosamine reductase; peptidoglycan synthesis, cell WALL, cell division, oxidoreductase, NADP, flavoprotein, FAD; HET: FAD; 2.30A {Staphylococcus aureus} SCOP: d.145.1.2 d.146.1.1
Probab=21.33 E-value=78 Score=28.70 Aligned_cols=29 Identities=24% Similarity=0.461 Sum_probs=26.5
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 177 KVLSPYSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
.|+.|.|.+|+..+++++.+++.|++++-
T Consensus 51 ~vv~P~s~eev~~~l~~a~~~~~pv~~~G 79 (326)
T 1hsk_A 51 FYITPTKNEEVQAVVKYAYQNEIPVTYLG 79 (326)
T ss_dssp EEECCSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred EEEEcCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 58899999999999999999889999874
No 221
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=21.14 E-value=1.3e+02 Score=27.22 Aligned_cols=51 Identities=22% Similarity=0.233 Sum_probs=35.7
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee-eccCCCHHH---HHHHHhCC
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR-SIRPLDRST---INASVRKT 290 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~-~l~P~d~~~---l~~~~~~~ 290 (325)
.+++++||+.|. .++|.|..|.+.|.++.++... .+-|+|.+. +.+.+++.
T Consensus 142 ~~~~vvViGgG~---~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~l~~~l~~~ 196 (367)
T 1xhc_A 142 NSGEAIIIGGGF---IGLELAGNLAEAGYHVKLIHRGAMFLGLDEELSNMIKDMLEET 196 (367)
T ss_dssp HHSEEEEEECSH---HHHHHHHHHHHTTCEEEEECSSSCCTTCCHHHHHHHHHHHHHT
T ss_pred cCCcEEEECCCH---HHHHHHHHHHhCCCEEEEEeCCCeeccCCHHHHHHHHHHHHHC
Confidence 357899998885 4667778888889999999754 445577653 44455443
No 222
>3tx1_A UDP-N-acetylenolpyruvoylglucosamine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: FAD; 2.69A {Listeria monocytogenes}
Probab=21.01 E-value=88 Score=28.43 Aligned_cols=29 Identities=17% Similarity=0.296 Sum_probs=26.8
Q ss_pred EEEeeCCHHHHHHHHHHhHhCCCcEEEEe
Q 020510 177 KVLSPYSSEDARGLLKAAIRDPDPVVFLE 205 (325)
Q Consensus 177 ~V~~P~d~~e~~~~l~~a~~~~~Pv~ir~ 205 (325)
.++.|.+.+|+..+++++.+.+-|++++-
T Consensus 57 ~vv~P~s~eev~~~v~~a~~~~~pv~v~G 85 (322)
T 3tx1_A 57 VFVMPKTIEEAQEVVAYCHQNKIPLTILG 85 (322)
T ss_dssp EEEECSSHHHHHHHHHHHHHTTCCEEEES
T ss_pred EEEEeCCHHHHHHHHHHHHHcCCcEEEEC
Confidence 68999999999999999999989999873
No 223
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=20.88 E-value=1.6e+02 Score=26.49 Aligned_cols=30 Identities=10% Similarity=0.201 Sum_probs=14.8
Q ss_pred EEEEechhHHHHHHHHHHHHhcCCcEEEEE
Q 020510 242 TITAFSKIVGLSLKAAEILAKEGISAEVIN 271 (325)
Q Consensus 242 ~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~ 271 (325)
+|+++|..+.++++-++..++.|.++-++-
T Consensus 84 ViaGvg~~t~~ai~la~~A~~~Gadavlv~ 113 (316)
T 3e96_A 84 VVAGIGYATSTAIELGNAAKAAGADAVMIH 113 (316)
T ss_dssp EEEEECSSHHHHHHHHHHHHHHTCSEEEEC
T ss_pred EEEEeCcCHHHHHHHHHHHHhcCCCEEEEc
Confidence 344445455555555555544455544443
No 224
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=20.87 E-value=1.8e+02 Score=26.11 Aligned_cols=41 Identities=7% Similarity=0.091 Sum_probs=23.0
Q ss_pred EEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHH
Q 020510 242 TITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRST 282 (325)
Q Consensus 242 ~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~ 282 (325)
+|+++|..+.++++-++..++.|.+.-++-.+...+.+.+.
T Consensus 84 ViaGvg~st~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~ 124 (314)
T 3d0c_A 84 VVAGIGYSVDTAIELGKSAIDSGADCVMIHQPVHPYITDAG 124 (314)
T ss_dssp EEEEECSSHHHHHHHHHHHHHTTCSEEEECCCCCSCCCHHH
T ss_pred EEecCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCHHH
Confidence 44455555566666666666666666555555444444444
No 225
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=20.86 E-value=1.4e+02 Score=27.38 Aligned_cols=51 Identities=10% Similarity=0.110 Sum_probs=35.2
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEee-eccC--CCHH---HHHHHHhCC
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLR-SIRP--LDRS---TINASVRKT 290 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~-~l~P--~d~~---~l~~~~~~~ 290 (325)
.+++++||+.|.. ++|.+..|.+.|.++.++... .+-| +|.+ .+.+.+++.
T Consensus 144 ~~~~vvViGgG~~---g~E~A~~l~~~g~~Vtlv~~~~~~l~~~~~~~~~~~l~~~l~~~ 200 (408)
T 2gqw_A 144 PQSRLLIVGGGVI---GLELAATARTAGVHVSLVETQPRLMSRAAPATLADFVARYHAAQ 200 (408)
T ss_dssp TTCEEEEECCSHH---HHHHHHHHHHTTCEEEEEESSSSSSTTTSCHHHHHHHHHHHHHT
T ss_pred cCCeEEEECCCHH---HHHHHHHHHhCCCEEEEEEeCCcccccccCHHHHHHHHHHHHHc
Confidence 4678999988864 667778888889999999864 3333 6654 344445443
No 226
>3ha2_A NADPH-quinone reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics, consortium, NESG; HET: MSE; 1.80A {Pediococcus pentosaceus atcc 25745}
Probab=20.69 E-value=2.3e+02 Score=22.97 Aligned_cols=46 Identities=7% Similarity=-0.061 Sum_probs=35.4
Q ss_pred CcEEEEEeeeccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHH
Q 020510 265 ISAEVINLRSIRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAF 313 (325)
Q Consensus 265 i~~~Vi~~~~l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l 313 (325)
-+++++|+.. +.|.+...+.+...+.||+.=--+ .+++...+..++
T Consensus 29 ~~v~v~dL~~--~~D~~~~~~~l~~aD~iV~~~P~y-~~~~pa~lK~~i 74 (177)
T 3ha2_A 29 SNVTWHPLVA--DFNVEQEQSLLLQNDRIILEFPLY-WYSAPALLKQWM 74 (177)
T ss_dssp TTEEEEECCT--TCCHHHHHHHHHTCSEEEEEEECB-TTBCCHHHHHHH
T ss_pred CCEEEEECCC--cccHHHHHHHHHhCCEEEEECChh-hccCCHHHHHHH
Confidence 4799999997 889988888898998877665544 577777776555
No 227
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=20.59 E-value=83 Score=28.13 Aligned_cols=50 Identities=22% Similarity=0.304 Sum_probs=31.8
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHHhCCCeEE
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASVRKTNRLV 294 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~~~~~~vv 294 (325)
+|++++||+.|..+... ++..|...|..+.+.+-++ +.|.+.+++.+-||
T Consensus 149 ~Gk~vvVvG~s~iVG~p--lA~lL~~~gAtVtv~~~~t------~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 149 HENTVTIVNRSPVVGRP--LSMMLLNRNYTVSVCHSKT------KDIGSMTRSSKIVV 198 (276)
T ss_dssp CSCEEEEECCCTTTHHH--HHHHHHHTTCEEEEECTTC------SCHHHHHHHSSEEE
T ss_pred CCCEEEEEcCChHHHHH--HHHHHHHCCCeEEEEeCCc------ccHHHhhccCCEEE
Confidence 57889999888766544 3456666788888876543 23445555555433
No 228
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=20.54 E-value=3.7e+02 Score=24.56 Aligned_cols=48 Identities=8% Similarity=0.140 Sum_probs=31.8
Q ss_pred CcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeee-------------ccCCCHHHHHHHHhC
Q 020510 239 KDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRS-------------IRPLDRSTINASVRK 289 (325)
Q Consensus 239 ~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~-------------l~P~d~~~l~~~~~~ 289 (325)
.++.|++.|.. +.+.++.+++.|+++.+++... +...|.+.|.+.+++
T Consensus 20 ~~ili~g~g~~---g~~~~~a~~~~G~~v~~v~~~~~~~~~~~ad~~~~~~~~d~~~l~~~~~~ 80 (433)
T 2dwc_A 20 QKILLLGSGEL---GKEIAIEAQRLGVEVVAVDRYANAPAMQVAHRSYVGNMMDKDFLWSVVER 80 (433)
T ss_dssp CEEEEESCSHH---HHHHHHHHHHTTCEEEEEESSTTCHHHHHSSEEEESCTTCHHHHHHHHHH
T ss_pred CEEEEECCCHH---HHHHHHHHHHCCCEEEEEECCCCChhhhhcceEEECCCCCHHHHHHHHHH
Confidence 36788877743 4445556667899998888641 223577788887763
No 229
>1wyz_A Putative S-adenosylmethionine-dependent methyltra; northeast structural genomics consortium, BTR28, methyltrans PSI; 2.50A {Bacteroides thetaiotaomicron} SCOP: c.90.1.1
Probab=20.48 E-value=47 Score=28.64 Aligned_cols=10 Identities=10% Similarity=0.315 Sum_probs=6.3
Q ss_pred eeCCcEEEEE
Q 020510 236 REGKDVTITA 245 (325)
Q Consensus 236 ~~G~dv~Iia 245 (325)
++|++|++++
T Consensus 81 ~~G~~Va~ls 90 (242)
T 1wyz_A 81 AGGASMGVIS 90 (242)
T ss_dssp HTTCCEEEEC
T ss_pred HcCCEEEEEe
Confidence 4466677775
No 230
>3ibs_A Conserved hypothetical protein BATB; structural genomics, protein structure, midwest center for S genomics, MCSG, PSI-2; HET: MSE; 2.10A {Bacteroides thetaiotaomicron}
Probab=20.47 E-value=1.2e+02 Score=24.79 Aligned_cols=58 Identities=16% Similarity=0.201 Sum_probs=38.4
Q ss_pred EEEEEechhHH-HHHHHHHHHHhcCCcEEEEEeeecc-----------------------CCCHHHHHHHHhCCC-eEEE
Q 020510 241 VTITAFSKIVG-LSLKAAEILAKEGISAEVINLRSIR-----------------------PLDRSTINASVRKTN-RLVT 295 (325)
Q Consensus 241 v~Iia~G~~~~-~a~~Aa~~L~~~Gi~~~Vi~~~~l~-----------------------P~d~~~l~~~~~~~~-~vvv 295 (325)
++||+=|.... ...++++.+++.|+.+-+|.+..-. .+|.+.|.+++..++ ..+.
T Consensus 115 ivllTDG~~~~~~~~~~~~~~~~~~i~v~~igig~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~L~~iA~~~gG~~~~ 194 (218)
T 3ibs_A 115 IIVITDGENHEGGAVEAAKAAAEKGIQVSVLGVGMPEGAPIPVEGTNDYRRDREGNVIVTRLNEGMCQEIAKDGKGIYVR 194 (218)
T ss_dssp EEEEECCTTCCSCHHHHHHHHHTTTEEEEEEEESCTTCEECBCTTSSCBCBCTTSCBCEECCCHHHHHHHHHHTEEEEEE
T ss_pred EEEEcCCCCCCCcHHHHHHHHHhcCCEEEEEEecCCCCCcccccCCCceeEcCCCCEeEecCCHHHHHHHHHhcCCEEEE
Confidence 44444443221 3567778888889988888877532 578889998888775 4455
Q ss_pred Eec
Q 020510 296 VEE 298 (325)
Q Consensus 296 vEe 298 (325)
+.+
T Consensus 195 ~~~ 197 (218)
T 3ibs_A 195 VDN 197 (218)
T ss_dssp ECS
T ss_pred CCC
Confidence 544
No 231
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=20.37 E-value=1.2e+02 Score=25.21 Aligned_cols=33 Identities=12% Similarity=0.156 Sum_probs=25.8
Q ss_pred cEEEEEech-hHHHHHHHHHHHHhcCCcEEEEEe
Q 020510 240 DVTITAFSK-IVGLSLKAAEILAKEGISAEVINL 272 (325)
Q Consensus 240 dv~Iia~G~-~~~~a~~Aa~~L~~~Gi~~~Vi~~ 272 (325)
++++.-+|+ .+..+.+.++.|++.|.++.||=-
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T 36 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVIS 36 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEC
Confidence 466777775 557889999999988998888743
No 232
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=20.35 E-value=2.8e+02 Score=24.62 Aligned_cols=24 Identities=17% Similarity=0.166 Sum_probs=16.1
Q ss_pred CCHHHHHHHHhCCCeEEEEecCCC
Q 020510 278 LDRSTINASVRKTNRLVTVEEGFP 301 (325)
Q Consensus 278 ~d~~~l~~~~~~~~~vvvvEe~~~ 301 (325)
.|.+.|.+++++++.++++|+-..
T Consensus 153 ~~l~~i~~l~~~~~~~li~D~a~~ 176 (416)
T 3isl_A 153 HPLKAIGEACRTEDALFIVDAVAT 176 (416)
T ss_dssp CCCHHHHHHHHHTTCEEEEECTTT
T ss_pred cCHHHHHHHHHHcCCEEEEECCcc
Confidence 456677778877776666666543
No 233
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=20.20 E-value=75 Score=29.97 Aligned_cols=37 Identities=16% Similarity=0.306 Sum_probs=24.1
Q ss_pred cEEEEEeee-----ccC----CCHHHHHHHHhC--CCeEEEEecCCCC
Q 020510 266 SAEVINLRS-----IRP----LDRSTINASVRK--TNRLVTVEEGFPQ 302 (325)
Q Consensus 266 ~~~Vi~~~~-----l~P----~d~~~l~~~~~~--~~~vvvvEe~~~~ 302 (325)
+..+|-+.+ -+| .|.+.|.+++++ ++.++++|+-+..
T Consensus 176 ~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~ 223 (427)
T 3i16_A 176 SITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGE 223 (427)
T ss_dssp TEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTT
T ss_pred CCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCcc
Confidence 455555544 244 456778888888 7778888876543
No 234
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=20.19 E-value=1.7e+02 Score=25.02 Aligned_cols=48 Identities=17% Similarity=0.078 Sum_probs=33.4
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCCCHHHHHHHH
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPLDRSTINASV 287 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~d~~~l~~~~ 287 (325)
.++.++||+.|. .+++.+..|.+.|.++.++....--+++.+...++.
T Consensus 142 ~~~~v~VvG~G~---~g~e~A~~l~~~g~~Vtlv~~~~~~~~~~~~~~~l~ 189 (311)
T 2q0l_A 142 KNKEVAVLGGGD---TAVEEAIYLANICKKVYLIHRRDGFRCAPITLEHAK 189 (311)
T ss_dssp TTSEEEEECCSH---HHHHHHHHHHTTSSEEEEECSSSSCCSCHHHHHHHH
T ss_pred CCCEEEEECCCH---HHHHHHHHHHhcCCEEEEEeeCCccCCCHHHHHHHh
Confidence 457888998875 455677778888999999876543356666554443
No 235
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=20.14 E-value=2e+02 Score=22.59 Aligned_cols=45 Identities=16% Similarity=0.039 Sum_probs=29.2
Q ss_pred Eeee-ccCCCHHHHHHHHhCCCeEEEEecCCCCCCHHHHHHHHHcCCCc
Q 020510 271 NLRS-IRPLDRSTINASVRKTNRLVTVEEGFPQHGVGAEIWCAFFPPAW 318 (325)
Q Consensus 271 ~~~~-l~P~d~~~l~~~~~~~~~vvvvEe~~~~GGlg~~v~~~l~~~~~ 318 (325)
++.. +-.++.+.+.+.++..+. +++- +...|++..+.++++....
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~-~l~p--s~~e~~~~~~~Ea~a~G~P 141 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF-VIIP--SYFEPFGLVALEAMCLGAI 141 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE-EEEC--CSCCSSCHHHHHHHHTTCE
T ss_pred CEEEEeccCCHHHHHHHHHHCCE-EEEC--CCCCCccHHHHHHHHCCCC
Confidence 4555 667788888888877764 4442 2235677778888865433
No 236
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=20.08 E-value=2.4e+02 Score=25.27 Aligned_cols=54 Identities=20% Similarity=0.177 Sum_probs=37.0
Q ss_pred eCCcEEEEEechhHHHHHHHHHHHHhcCCcEEEEEeeeccCC---C----HHHHHHHHhCCCeEE
Q 020510 237 EGKDVTITAFSKIVGLSLKAAEILAKEGISAEVINLRSIRPL---D----RSTINASVRKTNRLV 294 (325)
Q Consensus 237 ~G~dv~Iia~G~~~~~a~~Aa~~L~~~Gi~~~Vi~~~~l~P~---d----~~~l~~~~~~~~~vv 294 (325)
.|+.+.||++|.+-... ++.|+..|.++.++|.. .++. + .+.+.+++++.+-|+
T Consensus 138 ~g~tvGIiG~G~IG~~v---A~~l~~~G~~V~~~dr~-~~~~~~~~~~~~~~~l~ell~~aDiV~ 198 (315)
T 3pp8_A 138 EEFSVGIMGAGVLGAKV---AESLQAWGFPLRCWSRS-RKSWPGVESYVGREELRAFLNQTRVLI 198 (315)
T ss_dssp TTCCEEEECCSHHHHHH---HHHHHTTTCCEEEEESS-CCCCTTCEEEESHHHHHHHHHTCSEEE
T ss_pred CCCEEEEEeeCHHHHHH---HHHHHHCCCEEEEEcCC-chhhhhhhhhcccCCHHHHHhhCCEEE
Confidence 36789999999887644 55677779999888743 2222 1 246778887776543
Done!