Query 020518
Match_columns 325
No_of_seqs 319 out of 1180
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:02:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020518.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020518hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02824 hydrolase, alpha/beta 100.0 2.7E-37 5.8E-42 256.5 23.5 263 26-325 16-294 (294)
2 PLN02679 hydrolase, alpha/beta 100.0 2.3E-36 5E-41 256.3 24.4 264 27-325 70-357 (360)
3 PRK03592 haloalkane dehalogena 100.0 1.3E-35 2.9E-40 246.4 23.2 260 26-325 15-289 (295)
4 PRK00870 haloalkane dehalogena 100.0 1.3E-35 2.8E-40 247.1 22.8 277 11-324 16-300 (302)
5 TIGR02240 PHA_depoly_arom poly 100.0 1.6E-35 3.5E-40 243.5 22.6 254 26-324 10-265 (276)
6 PRK10673 acyl-CoA esterase; Pr 100.0 2.1E-34 4.6E-39 234.5 26.8 253 29-324 2-254 (255)
7 KOG4178 Soluble epoxide hydrol 100.0 3.8E-35 8.2E-40 231.9 20.8 262 26-324 30-319 (322)
8 PRK10349 carboxylesterase BioH 100.0 6E-35 1.3E-39 237.6 21.0 248 29-325 3-256 (256)
9 PLN02965 Probable pheophorbida 100.0 1.2E-34 2.7E-39 235.4 22.2 237 46-325 5-253 (255)
10 KOG2382 Predicted alpha/beta h 100.0 9.2E-34 2E-38 224.2 24.7 269 26-324 34-312 (315)
11 PRK03204 haloalkane dehalogena 100.0 2E-34 4.4E-39 237.3 21.9 252 26-323 22-286 (286)
12 PLN02578 hydrolase 100.0 7.1E-34 1.5E-38 240.8 24.8 257 26-324 74-354 (354)
13 PRK06489 hypothetical protein; 100.0 7.6E-34 1.7E-38 241.4 24.5 278 20-325 42-357 (360)
14 PLN03087 BODYGUARD 1 domain co 100.0 1.8E-33 3.9E-38 241.6 24.5 270 26-324 184-478 (481)
15 TIGR03611 RutD pyrimidine util 100.0 1.4E-33 3.1E-38 229.9 21.6 253 30-324 1-257 (257)
16 TIGR03343 biphenyl_bphD 2-hydr 100.0 1.6E-33 3.4E-38 232.8 22.1 249 27-324 19-282 (282)
17 TIGR03056 bchO_mg_che_rel puta 100.0 3.6E-33 7.8E-38 230.3 23.6 255 26-323 14-278 (278)
18 PLN03084 alpha/beta hydrolase 100.0 8.6E-33 1.9E-37 233.2 24.5 261 25-324 112-383 (383)
19 PLN02385 hydrolase; alpha/beta 100.0 1.2E-32 2.6E-37 233.4 22.8 264 25-324 69-344 (349)
20 PRK08775 homoserine O-acetyltr 100.0 2.3E-32 5.1E-37 230.9 21.9 259 26-325 44-339 (343)
21 PRK07581 hypothetical protein; 100.0 3E-32 6.5E-37 230.4 20.1 272 19-324 17-335 (339)
22 PLN02211 methyl indole-3-aceta 100.0 2.5E-31 5.4E-36 216.9 24.8 249 26-324 5-269 (273)
23 PRK11126 2-succinyl-6-hydroxy- 100.0 4.5E-32 9.7E-37 219.1 19.8 233 44-325 2-242 (242)
24 TIGR02427 protocat_pcaD 3-oxoa 100.0 4E-32 8.8E-37 220.2 18.9 243 29-323 1-251 (251)
25 TIGR01738 bioH putative pimelo 100.0 8.6E-32 1.9E-36 217.6 20.7 236 44-322 4-245 (245)
26 KOG1454 Predicted hydrolase/ac 100.0 3E-32 6.6E-37 224.9 18.1 263 29-324 38-323 (326)
27 TIGR01392 homoserO_Ac_trn homo 100.0 1.8E-31 3.8E-36 226.3 22.0 275 19-323 7-351 (351)
28 PRK00175 metX homoserine O-ace 100.0 3.2E-31 6.9E-36 226.2 23.3 279 21-325 26-374 (379)
29 KOG4409 Predicted hydrolase/ac 100.0 7.9E-32 1.7E-36 213.6 17.8 252 42-324 88-363 (365)
30 PLN02298 hydrolase, alpha/beta 100.0 5.3E-31 1.1E-35 222.1 23.7 266 25-324 40-316 (330)
31 TIGR01250 pro_imino_pep_2 prol 100.0 1.6E-30 3.5E-35 215.3 24.8 259 25-323 9-288 (288)
32 PHA02857 monoglyceride lipase; 100.0 1E-30 2.2E-35 215.2 22.3 257 26-324 9-272 (276)
33 PRK10749 lysophospholipase L2; 100.0 1.2E-30 2.5E-35 219.3 22.4 273 25-324 38-328 (330)
34 PF12697 Abhydrolase_6: Alpha/ 100.0 1.3E-31 2.8E-36 213.9 11.5 226 47-317 1-228 (228)
35 PLN02894 hydrolase, alpha/beta 100.0 3.4E-29 7.4E-34 214.5 23.0 246 42-324 103-384 (402)
36 TIGR03695 menH_SHCHC 2-succiny 100.0 9E-30 2E-34 206.3 17.5 237 44-323 1-251 (251)
37 PRK14875 acetoin dehydrogenase 100.0 9.2E-29 2E-33 212.3 22.2 249 26-324 117-370 (371)
38 TIGR01249 pro_imino_pep_1 prol 100.0 9.2E-28 2E-32 200.0 23.3 119 25-166 12-130 (306)
39 PLN02980 2-oxoglutarate decarb 100.0 4.5E-28 9.9E-33 237.0 23.9 261 30-325 1360-1639(1655)
40 KOG2984 Predicted hydrolase [G 100.0 6.1E-29 1.3E-33 180.9 11.2 264 7-324 10-275 (277)
41 PLN02652 hydrolase; alpha/beta 100.0 1.5E-27 3.2E-32 202.8 21.1 264 26-324 119-386 (395)
42 PRK06765 homoserine O-acetyltr 100.0 8.3E-27 1.8E-31 197.3 23.5 283 20-324 33-387 (389)
43 KOG1455 Lysophospholipase [Lip 100.0 6.5E-27 1.4E-31 182.4 20.0 266 25-324 35-311 (313)
44 PRK05855 short chain dehydroge 100.0 5.8E-28 1.3E-32 219.5 16.6 264 25-324 10-291 (582)
45 COG2267 PldB Lysophospholipase 100.0 7E-27 1.5E-31 191.3 20.8 265 25-324 17-293 (298)
46 PLN02511 hydrolase 100.0 2.3E-27 5E-32 202.5 16.3 256 24-324 78-364 (388)
47 TIGR01607 PST-A Plasmodium sub 99.9 8.5E-26 1.8E-30 189.2 21.7 272 25-324 5-332 (332)
48 KOG2564 Predicted acetyltransf 99.9 7.5E-26 1.6E-30 173.2 16.2 263 26-324 56-326 (343)
49 COG1647 Esterase/lipase [Gener 99.9 2.3E-25 4.9E-30 165.3 17.5 224 44-324 15-243 (243)
50 PRK10985 putative hydrolase; P 99.9 2.1E-25 4.5E-30 186.9 16.7 273 21-324 35-319 (324)
51 PRK05077 frsA fermentation/res 99.9 1.5E-22 3.4E-27 173.6 24.6 230 26-324 177-411 (414)
52 TIGR03100 hydr1_PEP hydrolase, 99.9 2.5E-22 5.5E-27 164.2 22.5 231 43-324 25-274 (274)
53 PRK11071 esterase YqiA; Provis 99.9 3.9E-22 8.4E-27 153.3 20.5 186 45-323 2-189 (190)
54 PRK13604 luxD acyl transferase 99.9 5.9E-22 1.3E-26 159.3 21.1 222 25-307 17-246 (307)
55 PF00561 Abhydrolase_1: alpha/ 99.9 3.6E-24 7.9E-29 171.5 7.5 215 80-320 1-230 (230)
56 PLN02872 triacylglycerol lipas 99.9 4.4E-22 9.6E-27 168.6 19.8 279 23-324 50-388 (395)
57 PRK10566 esterase; Provisional 99.9 3.3E-21 7.2E-26 156.2 22.3 209 43-324 26-247 (249)
58 TIGR01836 PHA_synth_III_C poly 99.9 3.4E-21 7.4E-26 163.3 22.0 260 30-324 48-349 (350)
59 TIGR01838 PHA_synth_I poly(R)- 99.9 6E-21 1.3E-25 166.1 23.9 254 29-312 173-462 (532)
60 PF06342 DUF1057: Alpha/beta h 99.9 1.8E-19 3.8E-24 140.0 22.6 239 44-323 35-297 (297)
61 COG0596 MhpC Predicted hydrola 99.9 2.8E-20 6E-25 152.0 19.3 116 27-167 9-124 (282)
62 COG3208 GrsT Predicted thioest 99.9 8.5E-20 1.8E-24 139.1 19.7 225 42-323 5-234 (244)
63 COG2021 MET2 Homoserine acetyl 99.9 8.1E-20 1.7E-24 147.4 19.6 278 19-324 27-367 (368)
64 PRK07868 acyl-CoA synthetase; 99.8 7.5E-19 1.6E-23 167.3 23.2 256 29-324 48-360 (994)
65 PF12695 Abhydrolase_5: Alpha/ 99.8 2.2E-19 4.7E-24 133.1 14.6 145 46-305 1-145 (145)
66 TIGR02821 fghA_ester_D S-formy 99.8 7.2E-18 1.6E-22 138.0 22.4 217 19-308 16-259 (275)
67 TIGR03101 hydr2_PEP hydrolase, 99.8 1E-18 2.2E-23 140.0 15.6 103 44-166 25-134 (266)
68 KOG4667 Predicted esterase [Li 99.8 2.3E-18 5.1E-23 127.3 15.1 220 43-322 32-255 (269)
69 PRK11460 putative hydrolase; P 99.8 1.1E-17 2.3E-22 133.1 19.8 180 42-322 14-209 (232)
70 KOG1552 Predicted alpha/beta h 99.8 7.4E-18 1.6E-22 129.5 15.8 192 43-324 59-251 (258)
71 KOG2931 Differentiation-relate 99.8 5.3E-17 1.1E-21 126.1 20.4 261 28-323 32-304 (326)
72 COG0429 Predicted hydrolase of 99.8 5.1E-18 1.1E-22 134.8 14.5 263 25-323 57-338 (345)
73 PF03096 Ndr: Ndr family; Int 99.8 2.8E-17 6.2E-22 129.6 18.1 261 28-324 9-278 (283)
74 PLN02442 S-formylglutathione h 99.8 7.2E-17 1.6E-21 132.4 21.1 123 27-166 29-178 (283)
75 KOG1838 Alpha/beta hydrolase [ 99.8 5.2E-17 1.1E-21 133.9 16.6 272 23-323 99-386 (409)
76 KOG4391 Predicted alpha/beta h 99.8 9.8E-18 2.1E-22 124.2 10.4 217 25-324 62-281 (300)
77 PLN00021 chlorophyllase 99.7 4.8E-16 1E-20 128.2 19.2 122 29-166 38-166 (313)
78 PF00975 Thioesterase: Thioest 99.7 1.4E-16 3.1E-21 127.4 15.2 105 45-168 1-106 (229)
79 TIGR03230 lipo_lipase lipoprot 99.7 6.9E-17 1.5E-21 137.0 13.9 109 41-167 38-155 (442)
80 COG1506 DAP2 Dipeptidyl aminop 99.7 9E-16 2E-20 138.8 19.6 230 25-324 373-615 (620)
81 PF00326 Peptidase_S9: Prolyl 99.7 4.5E-16 9.7E-21 122.9 14.2 198 60-324 3-208 (213)
82 PF02230 Abhydrolase_2: Phosph 99.7 3.5E-15 7.6E-20 117.8 16.6 183 42-324 12-214 (216)
83 cd00707 Pancreat_lipase_like P 99.7 5.3E-16 1.2E-20 126.2 9.8 107 43-168 35-149 (275)
84 TIGR01840 esterase_phb esteras 99.6 3.1E-14 6.8E-19 112.1 18.9 109 42-166 11-130 (212)
85 TIGR01839 PHA_synth_II poly(R) 99.6 1.2E-13 2.5E-18 119.6 22.7 119 29-169 200-331 (560)
86 KOG2565 Predicted hydrolases o 99.6 3.1E-14 6.6E-19 114.2 17.6 125 25-161 131-259 (469)
87 COG2945 Predicted hydrolase of 99.6 2.2E-13 4.7E-18 99.7 17.3 179 41-323 25-205 (210)
88 TIGR00976 /NonD putative hydro 99.6 1.4E-13 3.1E-18 123.5 19.7 123 24-167 3-133 (550)
89 PRK10162 acetyl esterase; Prov 99.6 9.4E-13 2E-17 110.0 22.8 234 29-324 68-314 (318)
90 PF06821 Ser_hydrolase: Serine 99.6 9.1E-14 2E-18 104.2 14.7 156 47-310 1-158 (171)
91 PF01738 DLH: Dienelactone hyd 99.6 8.1E-14 1.8E-18 110.4 15.3 182 42-324 12-216 (218)
92 COG0400 Predicted esterase [Ge 99.6 2.4E-13 5.3E-18 104.2 16.2 175 41-324 15-204 (207)
93 PF12146 Hydrolase_4: Putative 99.6 1.4E-14 3E-19 93.5 7.4 79 27-117 1-79 (79)
94 PF08538 DUF1749: Protein of u 99.6 2.4E-13 5.2E-18 108.7 15.0 249 43-323 32-303 (303)
95 TIGR03502 lipase_Pla1_cef extr 99.5 3.5E-14 7.6E-19 128.0 11.4 111 25-144 425-576 (792)
96 PF05448 AXE1: Acetyl xylan es 99.5 1.7E-12 3.6E-17 107.4 19.8 231 26-324 65-319 (320)
97 PF02273 Acyl_transf_2: Acyl t 99.5 3.6E-13 7.8E-18 102.3 14.3 226 24-311 9-242 (294)
98 PF05728 UPF0227: Uncharacteri 99.5 4E-12 8.8E-17 96.4 20.0 89 47-167 2-92 (187)
99 COG3319 Thioesterase domains o 99.5 5.7E-13 1.2E-17 105.4 15.9 104 45-167 1-104 (257)
100 PF10230 DUF2305: Uncharacteri 99.5 4E-12 8.7E-17 102.9 20.4 116 44-169 2-125 (266)
101 PF06500 DUF1100: Alpha/beta h 99.5 2.2E-12 4.7E-17 107.7 17.7 105 42-166 188-296 (411)
102 COG0412 Dienelactone hydrolase 99.5 8.7E-12 1.9E-16 98.9 20.1 179 45-324 28-232 (236)
103 PRK10252 entF enterobactin syn 99.5 1.4E-12 3E-17 129.4 17.2 101 44-166 1068-1171(1296)
104 TIGR01849 PHB_depoly_PhaZ poly 99.5 2.7E-11 5.9E-16 102.1 21.9 259 44-324 102-405 (406)
105 PF06028 DUF915: Alpha/beta hy 99.4 7E-12 1.5E-16 99.6 15.0 216 43-323 10-253 (255)
106 COG3545 Predicted esterase of 99.4 4.4E-11 9.5E-16 86.7 15.4 172 44-323 2-177 (181)
107 KOG2624 Triglyceride lipase-ch 99.4 6.2E-11 1.3E-15 99.7 17.8 127 24-166 55-199 (403)
108 COG3458 Acetyl esterase (deace 99.4 6.9E-12 1.5E-16 96.9 11.1 228 26-324 65-316 (321)
109 COG4757 Predicted alpha/beta h 99.4 1.1E-11 2.4E-16 93.4 11.7 251 25-322 13-280 (281)
110 PRK10115 protease 2; Provision 99.4 9.6E-11 2.1E-15 107.2 20.0 216 25-306 424-654 (686)
111 PF07819 PGAP1: PGAP1-like pro 99.3 1.2E-11 2.6E-16 97.3 11.3 112 43-166 3-123 (225)
112 PTZ00472 serine carboxypeptida 99.3 3E-11 6.6E-16 105.2 14.3 137 27-166 60-216 (462)
113 PF09752 DUF2048: Uncharacteri 99.3 1.4E-10 3E-15 94.4 15.9 242 42-323 90-347 (348)
114 PF07859 Abhydrolase_3: alpha/ 99.3 4.7E-10 1E-14 88.5 17.4 103 47-167 1-111 (211)
115 PF12740 Chlorophyllase2: Chlo 99.3 2.1E-10 4.5E-15 90.3 14.4 110 43-167 16-132 (259)
116 KOG1515 Arylacetamide deacetyl 99.3 4.8E-09 1E-13 86.7 22.9 131 23-169 67-210 (336)
117 PF06057 VirJ: Bacterial virul 99.3 1.1E-10 2.4E-15 86.7 11.7 185 45-324 3-191 (192)
118 PF03959 FSH1: Serine hydrolas 99.3 5.6E-11 1.2E-15 93.3 10.7 178 43-310 3-206 (212)
119 COG3243 PhaC Poly(3-hydroxyalk 99.3 5.5E-10 1.2E-14 92.3 16.3 110 37-169 100-220 (445)
120 PF02129 Peptidase_S15: X-Pro 99.2 5.6E-10 1.2E-14 91.5 16.1 124 26-169 1-139 (272)
121 COG3571 Predicted hydrolase of 99.2 5.1E-09 1.1E-13 74.6 17.0 103 44-165 14-123 (213)
122 KOG2551 Phospholipase/carboxyh 99.2 2.3E-09 5.1E-14 80.8 15.6 188 43-323 4-218 (230)
123 COG0657 Aes Esterase/lipase [L 99.2 1E-08 2.3E-13 85.8 21.3 124 27-168 61-193 (312)
124 PRK05371 x-prolyl-dipeptidyl a 99.2 4.8E-09 1E-13 96.9 20.6 77 78-166 278-373 (767)
125 PF10503 Esterase_phd: Esteras 99.2 4E-09 8.7E-14 82.1 16.4 121 30-166 1-132 (220)
126 smart00824 PKS_TE Thioesterase 99.1 3.4E-09 7.4E-14 83.4 16.0 99 49-166 2-102 (212)
127 KOG2112 Lysophospholipase [Lip 99.1 3.1E-09 6.7E-14 79.7 13.7 179 44-318 3-201 (206)
128 KOG4627 Kynurenine formamidase 99.1 8.2E-10 1.8E-14 81.9 9.7 113 31-166 57-172 (270)
129 PRK04940 hypothetical protein; 99.1 4.7E-08 1E-12 72.7 17.7 52 259-323 126-178 (180)
130 PF03403 PAF-AH_p_II: Platelet 99.0 7.9E-09 1.7E-13 87.8 14.1 107 42-166 98-262 (379)
131 PLN02733 phosphatidylcholine-s 99.0 9.2E-10 2E-14 94.6 7.3 97 55-166 105-201 (440)
132 PF08840 BAAT_C: BAAT / Acyl-C 99.0 2.4E-09 5.3E-14 83.9 9.1 52 107-168 4-58 (213)
133 PF07224 Chlorophyllase: Chlor 99.0 1.3E-09 2.8E-14 84.2 7.2 110 42-169 44-160 (307)
134 KOG3043 Predicted hydrolase re 99.0 4.1E-08 8.8E-13 74.3 14.1 192 28-323 26-238 (242)
135 PF12715 Abhydrolase_7: Abhydr 98.9 5.7E-09 1.2E-13 86.1 8.0 120 28-165 99-259 (390)
136 PF05990 DUF900: Alpha/beta hy 98.9 1.3E-08 2.7E-13 80.8 9.7 116 42-165 16-136 (233)
137 PF01674 Lipase_2: Lipase (cla 98.9 1.1E-09 2.4E-14 85.0 3.3 90 45-144 2-96 (219)
138 COG4814 Uncharacterized protei 98.9 2.8E-07 6E-12 71.1 16.1 217 44-323 45-285 (288)
139 KOG3975 Uncharacterized conser 98.9 1.6E-07 3.5E-12 72.1 14.2 113 42-165 27-146 (301)
140 PF00151 Lipase: Lipase; Inte 98.9 3.5E-09 7.6E-14 88.1 5.7 114 41-169 68-190 (331)
141 KOG2100 Dipeptidyl aminopeptid 98.9 1.5E-07 3.3E-12 86.9 16.5 223 26-323 506-745 (755)
142 PF00450 Peptidase_S10: Serine 98.8 8.1E-08 1.8E-12 84.0 13.5 140 26-167 22-182 (415)
143 PF03583 LIP: Secretory lipase 98.8 3.2E-07 6.9E-12 75.4 15.6 48 257-308 219-267 (290)
144 PLN02606 palmitoyl-protein thi 98.8 3.6E-07 7.7E-12 73.5 14.8 102 44-166 26-132 (306)
145 COG4188 Predicted dienelactone 98.8 9.7E-08 2.1E-12 78.4 11.0 95 43-146 70-182 (365)
146 PF11339 DUF3141: Protein of u 98.7 5.4E-06 1.2E-10 70.9 20.9 73 78-167 99-176 (581)
147 PF05705 DUF829: Eukaryotic pr 98.7 1.8E-06 3.9E-11 69.4 16.4 234 46-322 1-240 (240)
148 COG4099 Predicted peptidase [G 98.7 4.8E-07 1E-11 71.4 12.1 121 25-165 169-303 (387)
149 PF02089 Palm_thioest: Palmito 98.7 6.2E-08 1.3E-12 77.2 7.3 107 43-165 4-115 (279)
150 COG3509 LpqC Poly(3-hydroxybut 98.7 4.3E-07 9.4E-12 72.0 11.7 126 26-166 43-179 (312)
151 PLN02633 palmitoyl protein thi 98.7 1.2E-06 2.6E-11 70.6 13.9 103 44-165 25-130 (314)
152 COG1075 LipA Predicted acetylt 98.6 1.3E-07 2.9E-12 79.3 8.4 103 44-166 59-164 (336)
153 PF05057 DUF676: Putative seri 98.6 6.6E-08 1.4E-12 76.1 5.9 91 43-143 3-98 (217)
154 KOG4840 Predicted hydrolases o 98.6 2E-06 4.2E-11 65.1 13.1 102 44-167 36-145 (299)
155 PRK10439 enterobactin/ferric e 98.6 1.6E-05 3.5E-10 68.7 20.4 121 30-165 194-322 (411)
156 KOG2541 Palmitoyl protein thio 98.6 5.6E-06 1.2E-10 64.6 15.4 99 45-165 24-127 (296)
157 KOG3847 Phospholipase A2 (plat 98.5 1.3E-06 2.7E-11 69.6 9.7 107 42-166 116-275 (399)
158 PF12048 DUF3530: Protein of u 98.5 6.3E-05 1.4E-09 62.5 20.2 112 42-166 85-229 (310)
159 PF05677 DUF818: Chlamydia CHL 98.5 1.1E-06 2.4E-11 71.3 9.2 90 42-145 135-237 (365)
160 KOG1553 Predicted alpha/beta h 98.5 1E-06 2.2E-11 71.1 8.4 101 43-165 242-344 (517)
161 COG3150 Predicted esterase [Ge 98.4 2.8E-05 6E-10 56.3 13.9 80 47-145 2-81 (191)
162 KOG2281 Dipeptidyl aminopeptid 98.4 2E-05 4.4E-10 68.9 15.5 228 25-324 621-866 (867)
163 PF04301 DUF452: Protein of un 98.3 7.4E-05 1.6E-09 57.7 15.4 82 44-169 11-93 (213)
164 KOG1282 Serine carboxypeptidas 98.3 0.00077 1.7E-08 58.4 22.8 140 25-166 54-213 (454)
165 COG2936 Predicted acyl esteras 98.3 7.2E-06 1.6E-10 71.8 10.3 127 22-167 24-160 (563)
166 COG4782 Uncharacterized protei 98.3 8.1E-06 1.8E-10 66.8 9.7 117 42-165 114-233 (377)
167 KOG3253 Predicted alpha/beta h 98.2 3.9E-05 8.4E-10 66.7 13.4 163 43-308 175-348 (784)
168 PF00756 Esterase: Putative es 98.2 6.5E-06 1.4E-10 66.8 8.6 53 106-166 96-150 (251)
169 KOG3101 Esterase D [General fu 98.2 2.6E-05 5.6E-10 58.8 9.7 127 26-168 24-178 (283)
170 PF10340 DUF2424: Protein of u 98.2 6.8E-05 1.5E-09 62.8 13.0 115 43-169 121-238 (374)
171 KOG1551 Uncharacterized conser 98.1 0.00015 3.2E-09 56.7 13.4 56 260-324 309-365 (371)
172 PF10142 PhoPQ_related: PhoPQ- 98.1 0.002 4.4E-08 54.3 20.7 159 111-324 158-319 (367)
173 PF11144 DUF2920: Protein of u 98.0 0.0012 2.7E-08 55.6 18.1 47 249-299 285-331 (403)
174 PF05577 Peptidase_S28: Serine 98.0 4.2E-05 9.2E-10 67.2 10.1 107 44-166 29-148 (434)
175 PF02450 LCAT: Lecithin:choles 98.0 6.9E-05 1.5E-09 64.5 10.0 85 59-166 66-160 (389)
176 cd00312 Esterase_lipase Estera 97.9 0.0001 2.3E-09 66.0 9.7 109 42-167 93-214 (493)
177 COG1073 Hydrolases of the alph 97.8 0.00038 8.3E-09 57.7 12.2 71 247-324 223-296 (299)
178 KOG3724 Negative regulator of 97.8 0.00015 3.2E-09 65.2 9.6 113 42-165 87-219 (973)
179 PF08386 Abhydrolase_4: TAP-li 97.7 0.00016 3.5E-09 49.5 6.7 58 258-323 35-92 (103)
180 COG1505 Serine proteases of th 97.7 0.00068 1.5E-08 59.4 11.2 234 23-323 400-644 (648)
181 COG3946 VirJ Type IV secretory 97.7 0.0004 8.6E-09 57.9 9.0 87 43-146 259-349 (456)
182 KOG1202 Animal-type fatty acid 97.6 0.0017 3.6E-08 61.5 13.6 101 42-168 2121-2221(2376)
183 PF06259 Abhydrolase_8: Alpha/ 97.6 0.0019 4.2E-08 48.6 11.6 55 104-166 86-144 (177)
184 COG2272 PnbA Carboxylesterase 97.5 0.00088 1.9E-08 57.7 9.1 120 34-167 84-218 (491)
185 KOG3967 Uncharacterized conser 97.5 0.0068 1.5E-07 46.1 12.5 114 42-168 99-229 (297)
186 COG0627 Predicted esterase [Ge 97.4 0.00087 1.9E-08 55.5 7.9 112 42-168 52-189 (316)
187 cd00741 Lipase Lipase. Lipase 97.4 0.00069 1.5E-08 50.3 6.8 56 106-166 8-67 (153)
188 PF01764 Lipase_3: Lipase (cla 97.3 0.00071 1.5E-08 49.3 5.7 40 106-146 48-87 (140)
189 KOG2183 Prolylcarboxypeptidase 97.3 0.0017 3.7E-08 54.4 8.0 96 44-146 80-190 (492)
190 PLN02209 serine carboxypeptida 97.2 0.0033 7.2E-08 54.9 9.3 137 27-166 51-212 (437)
191 COG4553 DepA Poly-beta-hydroxy 97.1 0.077 1.7E-06 42.7 15.7 255 44-324 103-406 (415)
192 PF00135 COesterase: Carboxyle 97.1 0.018 3.9E-07 52.3 14.0 110 43-167 124-246 (535)
193 COG2382 Fes Enterochelin ester 97.0 0.019 4E-07 46.6 11.7 107 42-166 96-212 (299)
194 PF07082 DUF1350: Protein of u 97.0 0.013 2.8E-07 46.2 10.6 94 44-165 17-124 (250)
195 PLN03016 sinapoylglucose-malat 97.0 0.0064 1.4E-07 53.1 9.7 136 27-165 49-209 (433)
196 KOG2521 Uncharacterized conser 97.0 0.055 1.2E-06 45.4 14.5 63 258-324 226-289 (350)
197 PLN02517 phosphatidylcholine-s 96.9 0.0026 5.6E-08 56.3 6.6 95 59-165 157-262 (642)
198 KOG2237 Predicted serine prote 96.9 0.014 2.9E-07 52.0 10.8 107 42-165 468-583 (712)
199 COG2939 Carboxypeptidase C (ca 96.9 0.0064 1.4E-07 52.7 8.7 130 30-165 87-235 (498)
200 PF11187 DUF2974: Protein of u 96.8 0.026 5.6E-07 44.6 11.0 52 109-166 72-123 (224)
201 COG4947 Uncharacterized protei 96.8 0.0025 5.5E-08 46.6 4.6 119 27-166 14-136 (227)
202 COG2819 Predicted hydrolase of 96.8 0.0032 6.9E-08 50.1 5.3 48 110-166 122-172 (264)
203 cd00519 Lipase_3 Lipase (class 96.7 0.0054 1.2E-07 48.9 6.4 22 124-145 129-150 (229)
204 PF04083 Abhydro_lipase: Parti 96.7 0.0023 5E-08 39.0 3.2 39 23-61 18-60 (63)
205 KOG2182 Hydrolytic enzymes of 96.6 0.023 5.1E-07 49.1 9.8 109 42-165 84-206 (514)
206 PF11288 DUF3089: Protein of u 96.5 0.0081 1.7E-07 46.3 5.8 67 78-144 44-116 (207)
207 PF06441 EHN: Epoxide hydrolas 96.4 0.0018 3.8E-08 44.8 1.7 37 26-64 76-112 (112)
208 KOG2369 Lecithin:cholesterol a 96.4 0.0065 1.4E-07 52.1 5.3 71 59-146 125-205 (473)
209 COG1770 PtrB Protease II [Amin 96.4 0.43 9.4E-06 43.2 16.4 109 42-166 446-562 (682)
210 PLN02162 triacylglycerol lipas 96.4 0.011 2.4E-07 51.0 6.5 37 105-142 261-297 (475)
211 PLN00413 triacylglycerol lipas 96.3 0.014 3E-07 50.6 6.7 38 105-143 267-304 (479)
212 PLN02454 triacylglycerol lipas 96.3 0.0098 2.1E-07 50.8 5.6 37 108-144 212-249 (414)
213 COG2830 Uncharacterized protei 96.2 0.061 1.3E-06 39.1 8.6 77 45-165 12-89 (214)
214 PLN02571 triacylglycerol lipas 96.1 0.012 2.5E-07 50.4 5.3 39 106-144 208-247 (413)
215 PLN02408 phospholipase A1 96.0 0.015 3.2E-07 49.0 5.3 40 107-146 183-223 (365)
216 KOG4372 Predicted alpha/beta h 95.9 0.0096 2.1E-07 50.1 3.7 91 43-143 79-170 (405)
217 PLN02310 triacylglycerol lipas 95.8 0.019 4.1E-07 49.0 5.2 39 106-144 189-230 (405)
218 PLN02934 triacylglycerol lipas 95.6 0.023 5E-07 49.6 5.1 38 105-143 304-341 (515)
219 PF06850 PHB_depo_C: PHB de-po 95.6 0.025 5.5E-07 42.7 4.6 65 257-324 134-201 (202)
220 PLN02324 triacylglycerol lipas 95.5 0.029 6.2E-07 48.0 5.3 38 107-144 198-236 (415)
221 PLN03037 lipase class 3 family 95.4 0.029 6.3E-07 49.2 5.1 39 106-144 298-339 (525)
222 PF01083 Cutinase: Cutinase; 95.3 0.057 1.2E-06 41.1 5.9 108 46-166 7-122 (179)
223 PLN02753 triacylglycerol lipas 95.2 0.038 8.2E-07 48.6 5.2 39 106-144 291-333 (531)
224 KOG1283 Serine carboxypeptidas 95.2 0.14 3E-06 41.9 7.8 143 24-167 10-167 (414)
225 PLN02761 lipase class 3 family 95.2 0.041 8.9E-07 48.3 5.2 39 106-144 272-315 (527)
226 PF05277 DUF726: Protein of un 95.1 0.083 1.8E-06 44.4 6.7 43 120-166 218-260 (345)
227 PLN02802 triacylglycerol lipas 95.1 0.046 1E-06 47.9 5.2 40 106-145 312-352 (509)
228 PLN02719 triacylglycerol lipas 94.9 0.051 1.1E-06 47.6 5.1 39 106-144 277-319 (518)
229 COG4287 PqaA PhoPQ-activated p 94.8 0.12 2.6E-06 43.1 6.5 56 258-323 330-385 (507)
230 KOG1516 Carboxylesterase and r 94.7 0.29 6.3E-06 44.7 9.8 104 44-166 112-232 (545)
231 PLN02213 sinapoylglucose-malat 94.1 0.25 5.4E-06 41.6 7.5 67 257-324 233-316 (319)
232 PF05576 Peptidase_S37: PS-10 94.1 0.12 2.6E-06 44.0 5.3 105 42-165 61-168 (448)
233 PLN02847 triacylglycerol lipas 93.9 0.12 2.7E-06 46.2 5.3 20 124-143 252-271 (633)
234 PRK12467 peptide synthase; Pro 93.3 0.96 2.1E-05 51.4 12.0 104 44-166 3692-3795(3956)
235 KOG4569 Predicted lipase [Lipi 93.1 0.18 3.9E-06 42.7 5.0 38 106-144 155-192 (336)
236 PF08237 PE-PPE: PE-PPE domain 91.3 1.2 2.6E-05 35.3 7.3 66 79-144 2-69 (225)
237 KOG2029 Uncharacterized conser 90.7 0.53 1.2E-05 42.0 5.2 62 104-165 505-571 (697)
238 PLN02213 sinapoylglucose-malat 90.6 1.2 2.7E-05 37.4 7.2 84 81-166 3-96 (319)
239 PF07519 Tannase: Tannase and 90.3 2.7 5.9E-05 37.6 9.3 77 78-166 58-150 (474)
240 COG5153 CVT17 Putative lipase 89.1 0.58 1.3E-05 37.7 3.8 36 110-145 263-298 (425)
241 KOG4540 Putative lipase essent 89.1 0.58 1.3E-05 37.7 3.8 36 110-145 263-298 (425)
242 TIGR03712 acc_sec_asp2 accesso 88.0 19 0.0004 32.0 15.0 87 44-144 288-378 (511)
243 PLN03016 sinapoylglucose-malat 87.3 3.1 6.8E-05 36.7 7.6 67 257-324 347-430 (433)
244 PLN02209 serine carboxypeptida 87.0 2.9 6.2E-05 37.0 7.2 67 257-324 351-434 (437)
245 KOG4388 Hormone-sensitive lipa 86.6 1.3 2.8E-05 39.6 4.8 107 42-165 394-507 (880)
246 PF06309 Torsin: Torsin; Inte 84.3 6.2 0.00013 28.0 6.4 28 41-68 49-78 (127)
247 PF00698 Acyl_transf_1: Acyl t 81.3 1.2 2.5E-05 37.6 2.4 30 112-142 74-103 (318)
248 smart00827 PKS_AT Acyl transfe 80.4 2.3 5.1E-05 35.3 3.9 30 112-142 72-101 (298)
249 KOG2385 Uncharacterized conser 79.8 7 0.00015 34.7 6.3 45 120-168 445-489 (633)
250 TIGR03131 malonate_mdcH malona 78.7 2.9 6.4E-05 34.7 3.9 30 112-142 66-95 (295)
251 PF09949 DUF2183: Uncharacteri 78.4 18 0.00039 24.5 7.7 73 78-161 23-97 (100)
252 cd07225 Pat_PNPLA6_PNPLA7 Pata 78.3 3.3 7.2E-05 34.6 4.0 32 112-144 33-64 (306)
253 cd07198 Patatin Patatin-like p 77.4 4 8.7E-05 30.8 4.0 34 112-146 16-49 (172)
254 PRK10279 hypothetical protein; 77.1 3.7 8.1E-05 34.2 4.0 33 112-145 23-55 (300)
255 COG3933 Transcriptional antite 76.5 17 0.00036 31.9 7.6 76 44-142 109-184 (470)
256 cd07207 Pat_ExoU_VipD_like Exo 75.7 4.5 9.6E-05 31.2 3.9 32 113-145 18-49 (194)
257 TIGR00128 fabD malonyl CoA-acy 75.5 3.8 8.2E-05 33.9 3.7 31 112-143 72-103 (290)
258 PF07519 Tannase: Tannase and 75.2 9.6 0.00021 34.2 6.3 66 259-324 355-426 (474)
259 cd07227 Pat_Fungal_NTE1 Fungal 74.3 5.1 0.00011 32.8 4.0 32 112-144 28-59 (269)
260 PF03610 EIIA-man: PTS system 73.5 21 0.00046 24.8 6.6 76 46-144 2-78 (116)
261 COG2939 Carboxypeptidase C (ca 73.3 5.7 0.00012 35.2 4.2 64 258-323 426-489 (498)
262 cd07210 Pat_hypo_W_succinogene 72.9 6.5 0.00014 31.1 4.2 30 114-144 20-49 (221)
263 PF09994 DUF2235: Uncharacteri 72.5 48 0.001 27.3 9.4 41 104-144 72-113 (277)
264 COG1752 RssA Predicted esteras 70.5 6.5 0.00014 33.0 4.0 33 112-145 29-61 (306)
265 TIGR02816 pfaB_fam PfaB family 69.3 6.2 0.00014 35.8 3.8 32 112-144 254-286 (538)
266 cd07209 Pat_hypo_Ecoli_Z1214_l 68.4 8.2 0.00018 30.4 3.9 32 113-145 17-48 (215)
267 cd07228 Pat_NTE_like_bacteria 68.2 9.3 0.0002 28.9 4.1 32 114-146 20-51 (175)
268 cd07205 Pat_PNPLA6_PNPLA7_NTE1 63.3 13 0.00029 28.0 4.1 30 114-144 20-49 (175)
269 cd07230 Pat_TGL4-5_like Triacy 59.9 12 0.00025 33.1 3.6 34 112-146 91-124 (421)
270 cd01714 ETF_beta The electron 59.3 22 0.00048 27.7 4.7 54 81-146 79-136 (202)
271 PF11713 Peptidase_C80: Peptid 59.1 5.9 0.00013 29.4 1.5 50 85-135 59-116 (157)
272 PF06792 UPF0261: Uncharacteri 57.2 1.4E+02 0.0029 26.3 9.7 101 46-163 3-127 (403)
273 cd07229 Pat_TGL3_like Triacylg 57.1 15 0.00032 31.9 3.7 33 113-146 102-134 (391)
274 COG3340 PepE Peptidase E [Amin 56.1 49 0.0011 26.0 5.8 36 44-87 32-70 (224)
275 TIGR01626 ytfJ_HI0045 conserve 56.0 90 0.0019 24.0 7.4 94 26-141 43-142 (184)
276 cd07211 Pat_PNPLA8 Patatin-lik 55.8 41 0.0009 28.2 6.2 52 78-142 6-60 (308)
277 COG1576 Uncharacterized conser 55.6 40 0.00087 24.8 5.1 51 78-141 66-116 (155)
278 cd07232 Pat_PLPL Patain-like p 54.3 16 0.00035 32.0 3.6 33 113-146 86-118 (407)
279 cd07231 Pat_SDP1-like Sugar-De 53.1 19 0.00042 30.2 3.6 32 113-145 87-118 (323)
280 PF00326 Peptidase_S9: Prolyl 51.8 35 0.00075 26.6 4.9 61 43-118 143-208 (213)
281 COG0218 Predicted GTPase [Gene 50.5 17 0.00037 28.1 2.7 62 258-323 136-197 (200)
282 PRK02399 hypothetical protein; 49.9 1.8E+02 0.0039 25.6 10.9 101 45-163 4-129 (406)
283 PF05576 Peptidase_S37: PS-10 48.3 29 0.00062 30.3 3.9 54 259-322 353-411 (448)
284 PRK05282 (alpha)-aspartyl dipe 48.0 1.4E+02 0.003 24.0 7.6 91 44-141 31-130 (233)
285 cd07206 Pat_TGL3-4-5_SDP1 Tria 46.7 31 0.00067 28.8 3.8 33 112-146 88-120 (298)
286 cd07224 Pat_like Patatin-like 46.3 34 0.00074 27.3 4.1 32 114-145 19-51 (233)
287 COG1506 DAP2 Dipeptidyl aminop 46.2 73 0.0016 29.9 6.7 44 42-93 549-595 (620)
288 cd07212 Pat_PNPLA9 Patatin-lik 46.1 17 0.00036 30.6 2.3 20 125-144 34-53 (312)
289 COG0552 FtsY Signal recognitio 45.9 1.9E+02 0.0041 24.7 12.1 108 43-185 137-250 (340)
290 cd03818 GT1_ExpC_like This fam 45.7 1.8E+02 0.0038 25.3 8.8 38 47-94 2-39 (396)
291 PRK06731 flhF flagellar biosyn 45.1 1.8E+02 0.0038 24.0 8.3 65 78-161 153-218 (270)
292 PF10605 3HBOH: 3HB-oligomer h 45.1 26 0.00056 32.1 3.3 50 257-307 555-605 (690)
293 PF06289 FlbD: Flagellar prote 44.7 56 0.0012 19.7 3.7 31 295-325 28-58 (60)
294 cd07204 Pat_PNPLA_like Patatin 44.6 37 0.00081 27.3 4.0 20 126-145 34-53 (243)
295 COG0331 FabD (acyl-carrier-pro 43.4 35 0.00076 28.7 3.8 22 120-142 83-104 (310)
296 COG0031 CysK Cysteine synthase 43.4 2E+02 0.0043 24.2 10.0 88 46-145 170-281 (300)
297 PF00448 SRP54: SRP54-type pro 42.8 99 0.0021 23.9 6.0 66 78-161 82-147 (196)
298 COG3887 Predicted signaling pr 42.7 48 0.001 30.4 4.6 107 43-165 257-377 (655)
299 cd07218 Pat_iPLA2 Calcium-inde 42.6 42 0.00091 27.1 4.0 20 126-145 33-52 (245)
300 PF12242 Eno-Rase_NADH_b: NAD( 42.5 47 0.001 21.2 3.3 39 106-145 20-62 (78)
301 cd01819 Patatin_and_cPLA2 Pata 42.0 49 0.0011 24.4 4.1 18 124-141 29-46 (155)
302 PF06500 DUF1100: Alpha/beta h 41.9 36 0.00077 29.8 3.7 65 255-324 187-254 (411)
303 cd07208 Pat_hypo_Ecoli_yjju_li 41.3 47 0.001 27.1 4.3 23 124-146 28-50 (266)
304 PF10081 Abhydrolase_9: Alpha/ 40.7 47 0.001 27.3 3.9 38 124-166 110-147 (289)
305 TIGR02764 spore_ybaN_pdaB poly 40.4 16 0.00034 28.1 1.3 34 45-86 152-188 (191)
306 PF12780 AAA_8: P-loop contain 39.3 1.5E+02 0.0033 24.4 6.8 52 50-122 36-87 (268)
307 PHA02114 hypothetical protein 37.9 60 0.0013 21.6 3.4 34 45-86 83-116 (127)
308 PF14253 AbiH: Bacteriophage a 37.9 36 0.00079 27.7 3.1 18 120-138 233-250 (270)
309 TIGR00521 coaBC_dfp phosphopan 36.8 2.9E+02 0.0064 24.2 8.9 72 45-130 113-193 (390)
310 TIGR02873 spore_ylxY probable 35.5 30 0.00064 28.4 2.2 34 45-86 231-264 (268)
311 PRK14457 ribosomal RNA large s 35.0 1.5E+02 0.0033 25.5 6.3 76 47-139 260-335 (345)
312 TIGR02884 spore_pdaA delta-lac 35.0 30 0.00065 27.5 2.1 34 45-86 187-221 (224)
313 PF09314 DUF1972: Domain of un 34.9 2.1E+02 0.0046 22.0 12.7 92 46-142 5-113 (185)
314 TIGR02813 omega_3_PfaA polyket 34.0 44 0.00095 37.1 3.6 29 112-141 664-692 (2582)
315 COG0529 CysC Adenylylsulfate k 33.3 2.2E+02 0.0049 21.9 7.1 61 42-115 20-84 (197)
316 cd07222 Pat_PNPLA4 Patatin-lik 32.4 73 0.0016 25.7 4.0 18 125-142 33-50 (246)
317 COG4822 CbiK Cobalamin biosynt 32.3 2.5E+02 0.0055 22.2 7.1 63 41-127 135-198 (265)
318 PRK00103 rRNA large subunit me 32.0 1.5E+02 0.0033 22.1 5.2 46 78-135 66-111 (157)
319 PF12000 Glyco_trans_4_3: Gkyc 32.0 2.3E+02 0.0049 21.5 6.8 26 118-146 62-88 (171)
320 PRK14974 cell division protein 31.8 2.7E+02 0.0058 23.9 7.3 67 78-162 221-287 (336)
321 PLN02752 [acyl-carrier protein 31.5 53 0.0011 28.1 3.2 18 125-142 126-143 (343)
322 PLN02735 carbamoyl-phosphate s 31.2 2.3E+02 0.0051 28.9 7.8 106 26-143 554-668 (1102)
323 PRK05579 bifunctional phosphop 30.9 3.8E+02 0.0081 23.7 10.0 74 44-130 116-196 (399)
324 COG1448 TyrB Aspartate/tyrosin 30.7 3.2E+02 0.0069 23.8 7.3 88 43-165 170-264 (396)
325 TIGR01425 SRP54_euk signal rec 30.7 2.2E+02 0.0047 25.4 6.7 66 78-161 181-246 (429)
326 COG3673 Uncharacterized conser 30.5 1.4E+02 0.003 25.3 5.1 94 43-143 30-142 (423)
327 PRK14581 hmsF outer membrane N 30.4 96 0.0021 29.4 4.7 81 43-131 47-143 (672)
328 TIGR03607 patatin-related prot 30.4 66 0.0014 30.7 3.7 22 120-142 64-85 (739)
329 KOG0781 Signal recognition par 30.3 2.5E+02 0.0054 25.4 6.8 95 48-161 442-537 (587)
330 cd07217 Pat17_PNPLA8_PNPLA9_li 30.3 44 0.00095 28.6 2.4 19 125-143 43-61 (344)
331 PF02590 SPOUT_MTase: Predicte 30.2 84 0.0018 23.3 3.6 45 78-134 66-110 (155)
332 KOG2170 ATPase of the AAA+ sup 30.1 46 0.00099 27.8 2.3 20 42-61 107-126 (344)
333 COG0813 DeoD Purine-nucleoside 30.0 1.4E+02 0.003 23.7 4.7 35 124-168 57-95 (236)
334 PF01583 APS_kinase: Adenylyls 29.7 72 0.0016 23.7 3.2 38 44-87 1-38 (156)
335 cd00006 PTS_IIA_man PTS_IIA, P 29.6 2E+02 0.0043 20.1 6.8 71 46-138 3-73 (122)
336 PF03283 PAE: Pectinacetyleste 28.7 3.2E+02 0.0069 23.7 7.3 20 124-143 157-176 (361)
337 PRK08762 molybdopterin biosynt 27.9 3.3E+02 0.0072 23.7 7.5 36 118-165 132-168 (376)
338 PRK07877 hypothetical protein; 27.2 1.2E+02 0.0025 29.2 4.8 37 117-165 103-140 (722)
339 cd07213 Pat17_PNPLA8_PNPLA9_li 27.2 53 0.0011 27.3 2.4 20 125-144 36-55 (288)
340 cd05312 NAD_bind_1_malic_enz N 26.8 2.7E+02 0.0059 23.1 6.2 57 81-143 61-126 (279)
341 cd01853 Toc34_like Toc34-like 26.5 1E+02 0.0022 25.0 3.8 49 78-133 77-125 (249)
342 PRK12815 carB carbamoyl phosph 26.5 4.8E+02 0.01 26.7 9.0 107 26-144 534-650 (1068)
343 PF09419 PGP_phosphatase: Mito 26.3 2.9E+02 0.0063 20.9 6.1 51 78-134 39-89 (168)
344 PF03681 UPF0150: Uncharacteri 26.3 1.2E+02 0.0025 16.9 3.1 33 78-118 12-44 (48)
345 cd07221 Pat_PNPLA3 Patatin-lik 26.0 1.2E+02 0.0026 24.7 4.1 22 124-145 33-54 (252)
346 TIGR03709 PPK2_rel_1 polyphosp 26.0 81 0.0018 25.8 3.1 67 44-132 55-123 (264)
347 PF13709 DUF4159: Domain of un 25.4 3.2E+02 0.007 21.4 6.3 37 258-302 54-90 (207)
348 PF01734 Patatin: Patatin-like 25.3 72 0.0016 23.9 2.8 21 124-144 28-48 (204)
349 TIGR03707 PPK2_P_aer polyphosp 25.1 89 0.0019 25.0 3.1 69 44-135 30-101 (230)
350 COG4021 Uncharacterized conser 24.8 2.1E+02 0.0045 22.5 4.8 53 78-131 20-75 (249)
351 PRK07313 phosphopantothenoylcy 24.8 2.5E+02 0.0053 21.5 5.4 61 44-117 113-179 (182)
352 PF03490 Varsurf_PPLC: Variant 24.2 1E+02 0.0022 17.7 2.3 28 101-129 4-31 (51)
353 COG0541 Ffh Signal recognition 24.1 4.5E+02 0.0098 23.5 7.3 51 105-162 197-247 (451)
354 TIGR02354 thiF_fam2 thiamine b 23.9 2.2E+02 0.0048 22.1 5.1 40 114-165 14-54 (200)
355 TIGR00246 tRNA_RlmH_YbeA rRNA 23.9 1.7E+02 0.0037 21.7 4.2 41 81-134 67-107 (153)
356 PRK04148 hypothetical protein; 23.9 1.3E+02 0.0029 21.6 3.6 35 107-142 3-37 (134)
357 COG1582 FlgEa Uncharacterized 23.7 1.7E+02 0.0037 17.8 3.3 30 294-324 28-57 (67)
358 cd00382 beta_CA Carbonic anhyd 23.5 1.1E+02 0.0024 21.4 3.1 30 107-137 44-73 (119)
359 cd08769 DAP_dppA_2 Peptidase M 23.2 2.4E+02 0.0053 23.2 5.3 50 257-320 147-198 (270)
360 cd07219 Pat_PNPLA1 Patatin-lik 23.2 1.3E+02 0.0027 26.2 3.9 19 125-143 46-64 (382)
361 PRK01581 speE spermidine synth 23.1 5.1E+02 0.011 22.6 9.6 125 27-165 52-183 (374)
362 cd08770 DAP_dppA_3 Peptidase M 22.8 2.4E+02 0.0052 23.2 5.2 52 257-322 147-199 (263)
363 COG4667 Predicted esterase of 22.5 81 0.0018 25.8 2.4 36 110-146 28-63 (292)
364 PF15566 Imm18: Immunity prote 22.5 1.2E+02 0.0026 17.7 2.5 30 105-135 4-33 (52)
365 cd03379 beta_CA_cladeD Carboni 22.5 1.3E+02 0.0027 21.9 3.3 27 107-134 41-67 (142)
366 PF04244 DPRP: Deoxyribodipyri 22.2 2.3E+02 0.005 22.6 5.0 47 61-128 52-98 (224)
367 cd00401 AdoHcyase S-adenosyl-L 22.1 5.6E+02 0.012 22.8 7.8 60 61-146 75-134 (413)
368 cd08663 DAP_dppA_1 Peptidase M 22.0 2.8E+02 0.0061 22.8 5.4 52 257-322 147-200 (266)
369 PRK14456 ribosomal RNA large s 21.9 3.8E+02 0.0082 23.4 6.5 76 47-139 283-358 (368)
370 TIGR00959 ffh signal recogniti 21.8 5.8E+02 0.013 22.8 8.2 67 78-162 181-247 (428)
371 cd06292 PBP1_LacI_like_10 Liga 21.6 4.2E+02 0.0092 21.2 7.5 74 46-131 58-131 (273)
372 PF08484 Methyltransf_14: C-me 21.4 3.5E+02 0.0076 20.2 5.7 48 107-163 52-101 (160)
373 PRK14454 ribosomal RNA large s 21.3 3.9E+02 0.0085 23.0 6.5 75 48-139 257-331 (342)
374 PRK03363 fixB putative electro 21.2 2.7E+02 0.0059 23.6 5.4 53 81-145 51-104 (313)
375 KOG4231 Intracellular membrane 21.1 1.4E+02 0.0029 27.1 3.7 19 126-144 453-471 (763)
376 PRK06849 hypothetical protein; 21.0 3.3E+02 0.0072 23.7 6.3 62 60-131 17-85 (389)
377 COG1092 Predicted SAM-dependen 20.9 3.2E+02 0.0069 24.0 5.9 18 78-95 289-306 (393)
378 TIGR02883 spore_cwlD N-acetylm 20.8 2.5E+02 0.0054 21.5 4.9 40 82-122 2-45 (189)
379 KOG2872 Uroporphyrinogen decar 20.8 5.1E+02 0.011 21.7 6.9 73 44-131 252-336 (359)
380 COG3727 Vsr DNA G:T-mismatch r 20.7 3.3E+02 0.0072 19.6 6.1 30 27-56 34-69 (150)
381 cd07216 Pat17_PNPLA8_PNPLA9_li 20.6 69 0.0015 26.9 1.9 17 126-142 45-61 (309)
382 PF05724 TPMT: Thiopurine S-me 20.6 1.3E+02 0.0029 23.7 3.4 30 45-87 38-67 (218)
383 PRK13938 phosphoheptose isomer 20.3 3.3E+02 0.0072 21.1 5.4 27 119-145 42-68 (196)
384 COG0482 TrmU Predicted tRNA(5- 20.3 3.5E+02 0.0075 23.4 5.8 61 44-122 4-65 (356)
385 COG3946 VirJ Type IV secretory 20.1 4.5E+02 0.0097 23.3 6.4 76 62-146 66-144 (456)
386 cd07199 Pat17_PNPLA8_PNPLA9_li 20.1 80 0.0017 25.6 2.1 18 126-143 37-54 (258)
No 1
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.7e-37 Score=256.47 Aligned_cols=263 Identities=17% Similarity=0.187 Sum_probs=171.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC----CC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL----DP 101 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~----~~ 101 (325)
++.+++|...|++ +++|||+||+++++..|..+++.|+ +.|+|+++|+||||.|+.+... ..
T Consensus 16 ~~~~i~y~~~G~~-----~~~vlllHG~~~~~~~w~~~~~~L~---------~~~~vi~~DlpG~G~S~~~~~~~~~~~~ 81 (294)
T PLN02824 16 KGYNIRYQRAGTS-----GPALVLVHGFGGNADHWRKNTPVLA---------KSHRVYAIDLLGYGYSDKPNPRSAPPNS 81 (294)
T ss_pred cCeEEEEEEcCCC-----CCeEEEECCCCCChhHHHHHHHHHH---------hCCeEEEEcCCCCCCCCCCccccccccc
Confidence 5778999998752 5799999999999999999999998 5679999999999999876421 13
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 102 PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+...............
T Consensus 82 ~~~~~~~a~~l~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~p~--------~v~~lili~~~~~~~~~~~~~~~~~~~ 152 (294)
T PLN02824 82 FYTFETWGEQLNDFCSDVVGD-PAFVICNSVGGVVGLQAAVDAPE--------LVRGVMLINISLRGLHIKKQPWLGRPF 152 (294)
T ss_pred cCCHHHHHHHHHHHHHHhcCC-CeEEEEeCHHHHHHHHHHHhChh--------heeEEEEECCCcccccccccchhhhHH
Confidence 689999999999999999998 99999999999999999999999 999999999764322111110001111
Q ss_pred HHHhhcCCCC-CCcHH--------HHHHHHHhhccc---hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 182 LQTLQSLPSS-IPSRK--------WLVNHMMELGFS---KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 182 ~~~~~~~~~~-~~~~~--------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
...+...... ..... .....+....+. ....+.+......... .........+...........
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 228 (294)
T PLN02824 153 IKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLE----PGAVDVFLDFISYSGGPLPEE 228 (294)
T ss_pred HHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCC----chHHHHHHHHhccccccchHH
Confidence 1111100000 00000 000011000000 0000000000000000 000111111111111111123
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.+++ +|+++|+|++|..++.+..+.+.+..+. +++++++++||++++|+|++|++.|.+|++++
T Consensus 229 ~l~~i~--~P~lvi~G~~D~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 229 LLPAVK--CPVLIAWGEKDPWEPVELGRAYANFDAV--------EDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred HHhhcC--CCeEEEEecCCCCCChHHHHHHHhcCCc--------cceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 345554 8999999999999998877777665554 89999999999999999999999999999864
No 2
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=2.3e-36 Score=256.26 Aligned_cols=264 Identities=19% Similarity=0.208 Sum_probs=168.7
Q ss_pred cc-ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 27 LQ-TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 27 ~~-~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
|. +++|.+.|++...+++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|+.+.. ..+++
T Consensus 70 g~~~i~Y~~~G~g~~~~~gp~lvllHG~~~~~~~w~~~~~~L~---------~~~~via~Dl~G~G~S~~~~~--~~~~~ 138 (360)
T PLN02679 70 GEYSINYLVKGSPEVTSSGPPVLLVHGFGASIPHWRRNIGVLA---------KNYTVYAIDLLGFGASDKPPG--FSYTM 138 (360)
T ss_pred CceeEEEEEecCcccCCCCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCCCC--ccccH
Confidence 45 8999998864223356899999999999999999999888 689999999999999988654 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH-ccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH----
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS-CARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK---- 180 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~-~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~---- 180 (325)
+++++++.+++++++.+ +++|+||||||.+++.++.+ +|+ +|+++|++++................
T Consensus 139 ~~~a~~l~~~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~~P~--------rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~ 209 (360)
T PLN02679 139 ETWAELILDFLEEVVQK-PTVLIGNSVGSLACVIAASESTRD--------LVRGLVLLNCAGGMNNKAVVDDWRIKLLLP 209 (360)
T ss_pred HHHHHHHHHHHHHhcCC-CeEEEEECHHHHHHHHHHHhcChh--------hcCEEEEECCccccccccccchHHHhhhcc
Confidence 99999999999999999 99999999999999999875 799 99999999986432211110000000
Q ss_pred ---HHHHhhcCCC-------CCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 181 ---VLQTLQSLPS-------SIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 181 ---~~~~~~~~~~-------~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
....+...+. ...... ....+.... ......+....... .......+.........
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 281 (360)
T PLN02679 210 LLWLIDFLLKQRGIASALFNRVKQRD-NLKNILLSVYGNKEAVDDELVEIIRGPAD-------DEGALDAFVSIVTGPPG 281 (360)
T ss_pred hHHHHHHHhhchhhHHHHHHHhcCHH-HHHHHHHHhccCcccCCHHHHHHHHhhcc-------CCChHHHHHHHHhcCCC
Confidence 0000000000 000000 000000000 00000010000000 00001112222211112
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHH--HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV--IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+....+.+++ +|+++|+|++|..++++. .+.+.++....++ ++++++++|||++++|+|++|++.|.+||
T Consensus 282 ~~~~~~l~~i~--~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-----~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 282 PNPIKLIPRIS--LPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-----VTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred CCHHHHhhhcC--CCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-----eEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 22234455554 899999999999988763 1222333333332 89999999999999999999999999999
Q ss_pred hcC
Q 020518 323 ASV 325 (325)
Q Consensus 323 ~~~ 325 (325)
+++
T Consensus 355 ~~~ 357 (360)
T PLN02679 355 AQL 357 (360)
T ss_pred Hhc
Confidence 764
No 3
>PRK03592 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-35 Score=246.39 Aligned_cols=260 Identities=17% Similarity=0.199 Sum_probs=166.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|.+.|. +++|||+||++++...|..+++.|.+ .++|+++|+||||.|+.+. ..+++
T Consensus 15 ~g~~i~y~~~G~------g~~vvllHG~~~~~~~w~~~~~~L~~---------~~~via~D~~G~G~S~~~~---~~~~~ 76 (295)
T PRK03592 15 LGSRMAYIETGE------GDPIVFLHGNPTSSYLWRNIIPHLAG---------LGRCLAPDLIGMGASDKPD---IDYTF 76 (295)
T ss_pred CCEEEEEEEeCC------CCEEEEECCCCCCHHHHHHHHHHHhh---------CCEEEEEcCCCCCCCCCCC---CCCCH
Confidence 678899999874 57999999999999999999999984 5699999999999998875 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++|+.+++++++.+ +++++||||||.+|+.+|.++|+ +|+++|++++....................+
T Consensus 77 ~~~a~dl~~ll~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 147 (295)
T PRK03592 77 ADHARYLDAWFDALGLD-DVVLVGHDWGSALGFDWAARHPD--------RVRGIAFMEAIVRPMTWDDFPPAVRELFQAL 147 (295)
T ss_pred HHHHHHHHHHHHHhCCC-CeEEEEECHHHHHHHHHHHhChh--------heeEEEEECCCCCCcchhhcchhHHHHHHHH
Confidence 99999999999999998 99999999999999999999999 9999999997432211111111112222222
Q ss_pred hcCC--CC-CCcHHHHHHHHHhhc----cchhHHHHHhhcccCCCcccccccChhHHHHhhhc-c------cCCcccccc
Q 020518 186 QSLP--SS-IPSRKWLVNHMMELG----FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-Y------REMSYWPLL 251 (325)
Q Consensus 186 ~~~~--~~-~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~ 251 (325)
.... .. ......+........ ........+......... .............. . ...+....+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 224 (295)
T PRK03592 148 RSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPES---RRPTLSWPRELPIDGEPADVVALVEEYAQWL 224 (295)
T ss_pred hCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchh---hhhhhhhhhhcCCCCcchhhHhhhhHhHHHh
Confidence 1110 00 000011111111110 000000000100000000 00000000000000 0 000111223
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.++ ++|+++|+|++|..+++... +.+.+..++ +++++++++||++++|+|+++++.|.+|++++
T Consensus 225 ~~i--~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~ 289 (295)
T PRK03592 225 ATS--DVPKLLINAEPGAILTTGAIRDWCRSWPNQ--------LEITVFGAGLHFAQEDSPEEIGAAIAAWLRRL 289 (295)
T ss_pred ccC--CCCeEEEeccCCcccCcHHHHHHHHHhhhh--------cceeeccCcchhhhhcCHHHHHHHHHHHHHHh
Confidence 444 48999999999999955444 444445555 89999999999999999999999999999763
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=1.3e-35 Score=247.13 Aligned_cols=277 Identities=14% Similarity=0.094 Sum_probs=172.6
Q ss_pred ccccccccccCCccccc-cceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 11 SLNLLTRFLNSPTTRSL-QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 11 ~~~~~~~~~~~~~~~~~-~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
..+...++++.....++ .+++|.+.|.+ ++++|||+||++++...|..+++.|.+ +||+|+++|+||
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~y~~~G~~----~~~~lvliHG~~~~~~~w~~~~~~L~~--------~gy~vi~~Dl~G 83 (302)
T PRK00870 16 DYPFAPHYVDVDDGDGGPLRMHYVDEGPA----DGPPVLLLHGEPSWSYLYRKMIPILAA--------AGHRVIAPDLIG 83 (302)
T ss_pred CCCCCceeEeecCCCCceEEEEEEecCCC----CCCEEEEECCCCCchhhHHHHHHHHHh--------CCCEEEEECCCC
Confidence 33444444544433333 57999998753 468999999999999999999999986 789999999999
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 90 HGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 90 ~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
||.|+.+... ..++++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.....
T Consensus 84 ~G~S~~~~~~-~~~~~~~~a~~l~~~l~~l~~~-~v~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~ 153 (302)
T PRK00870 84 FGRSDKPTRR-EDYTYARHVEWMRSWFEQLDLT-DVTLVCQDWGGLIGLRLAAEHPD--------RFARLVVANTGLPTG 153 (302)
T ss_pred CCCCCCCCCc-ccCCHHHHHHHHHHHHHHcCCC-CEEEEEEChHHHHHHHHHHhChh--------heeEEEEeCCCCCCc
Confidence 9999876421 3589999999999999999999 99999999999999999999999 999999998642211
Q ss_pred CCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc-------c
Q 020518 170 KTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-------Y 242 (325)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~ 242 (325)
.. ........+.......+. ......................+....... .+............. .
T Consensus 154 ~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T PRK00870 154 DG-PMPDAFWAWRAFSQYSPV--LPVGRLVNGGTVRDLSDAVRAAYDAPFPDE----SYKAGARAFPLLVPTSPDDPAVA 226 (302)
T ss_pred cc-cchHHHhhhhcccccCch--hhHHHHhhccccccCCHHHHHHhhcccCCh----hhhcchhhhhhcCCCCCCCcchH
Confidence 10 001111111111000000 000000000000000100000000000000 000000000000000 0
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.....+..+.+++ +|+++|+|++|..+++.. +.+.+.+++... ..+++++++||++++|+|++|++.|.+||
T Consensus 227 ~~~~~~~~l~~i~--~P~lii~G~~D~~~~~~~-~~~~~~~~~~~~-----~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 227 ANRAAWAVLERWD--KPFLTAFSDSDPITGGGD-AILQKRIPGAAG-----QPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred HHHHHHHhhhcCC--CceEEEecCCCCcccCch-HHHHhhcccccc-----cceeeecCCCccchhhChHHHHHHHHHHH
Confidence 0001122344444 899999999999998765 667777665111 23889999999999999999999999999
Q ss_pred hc
Q 020518 323 AS 324 (325)
Q Consensus 323 ~~ 324 (325)
+.
T Consensus 299 ~~ 300 (302)
T PRK00870 299 RA 300 (302)
T ss_pred hc
Confidence 75
No 5
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=100.00 E-value=1.6e-35 Score=243.48 Aligned_cols=254 Identities=13% Similarity=0.146 Sum_probs=168.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|...+.+ +++++|||+||++++...|..+++.|. ++|+|+++|+||||.|..+. ..+++
T Consensus 10 ~~~~~~~~~~~~~---~~~~plvllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~~---~~~~~ 74 (276)
T TIGR02240 10 DGQSIRTAVRPGK---EGLTPLLIFNGIGANLELVFPFIEALD---------PDLEVIAFDVPGVGGSSTPR---HPYRF 74 (276)
T ss_pred CCcEEEEEEecCC---CCCCcEEEEeCCCcchHHHHHHHHHhc---------cCceEEEECCCCCCCCCCCC---CcCcH
Confidence 5678999775321 235799999999999999999999887 67999999999999998764 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++.+++++++++ +++|+||||||.+++.+|.++|+ +|+++|+++++............... ....
T Consensus 75 ~~~~~~~~~~i~~l~~~-~~~LvG~S~GG~va~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~-~~~~ 144 (276)
T TIGR02240 75 PGLAKLAARMLDYLDYG-QVNAIGVSWGGALAQQFAHDYPE--------RCKKLILAATAAGAVMVPGKPKVLMM-MASP 144 (276)
T ss_pred HHHHHHHHHHHHHhCcC-ceEEEEECHHHHHHHHHHHHCHH--------HhhheEEeccCCccccCCCchhHHHH-hcCc
Confidence 99999999999999999 99999999999999999999999 99999999987643211111111000 0000
Q ss_pred hcCCCCCCcHHHHHHHHHhhcc--chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 186 QSLPSSIPSRKWLVNHMMELGF--SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
........... .......... .............. .. ............ ..+....+.+++ +|+++|
T Consensus 145 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~-~~~~~~~l~~i~--~P~lii 213 (276)
T TIGR02240 145 RRYIQPSHGIH-IAPDIYGGAFRRDPELAMAHASKVRS---GG----KLGYYWQLFAGL-GWTSIHWLHKIQ--QPTLVL 213 (276)
T ss_pred hhhhccccccc-hhhhhccceeeccchhhhhhhhhccc---CC----CchHHHHHHHHc-CCchhhHhhcCC--CCEEEE
Confidence 00000000000 0000000000 00000000000000 00 000111111111 111223345554 899999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|++|.+++++..+.+.+.+++ ++++++++ ||++++|+|+++++.|.+|+++
T Consensus 214 ~G~~D~~v~~~~~~~l~~~~~~--------~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~~ 265 (276)
T TIGR02240 214 AGDDDPIIPLINMRLLAWRIPN--------AELHIIDD-GHLFLITRAEAVAPIIMKFLAE 265 (276)
T ss_pred EeCCCCcCCHHHHHHHHHhCCC--------CEEEEEcC-CCchhhccHHHHHHHHHHHHHH
Confidence 9999999999888888877765 89999986 9999999999999999999975
No 6
>PRK10673 acyl-CoA esterase; Provisional
Probab=100.00 E-value=2.1e-34 Score=234.54 Aligned_cols=253 Identities=21% Similarity=0.349 Sum_probs=170.7
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
++.|+.+++ .+..++|+|||+||++++...|..++..|. ++|+|+++|+||||.|..+ ..++++++
T Consensus 2 ~~~~~~~~~-~~~~~~~~iv~lhG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~s~~~----~~~~~~~~ 67 (255)
T PRK10673 2 KLNIRAQTA-QNPHNNSPIVLVHGLFGSLDNLGVLARDLV---------NDHDIIQVDMRNHGLSPRD----PVMNYPAM 67 (255)
T ss_pred cceeeeccC-CCCCCCCCEEEECCCCCchhHHHHHHHHHh---------hCCeEEEECCCCCCCCCCC----CCCCHHHH
Confidence 456666554 223568999999999999999999999988 6899999999999999875 45899999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++|+.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+......... ........+..
T Consensus 68 ~~d~~~~l~~l~~~-~~~lvGhS~Gg~va~~~a~~~~~--------~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~- 136 (255)
T PRK10673 68 AQDLLDTLDALQIE-KATFIGHSMGGKAVMALTALAPD--------RIDKLVAIDIAPVDYHVRRHD-EIFAAINAVSE- 136 (255)
T ss_pred HHHHHHHHHHcCCC-ceEEEEECHHHHHHHHHHHhCHh--------hcceEEEEecCCCCccchhhH-HHHHHHHHhhh-
Confidence 99999999999998 99999999999999999999999 999999998765332111111 11111111100
Q ss_pred CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCC
Q 020518 189 PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
............+...........+........ .+..........+. ....+..+..+ ++|+++|+|++|
T Consensus 137 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~--~~P~l~i~G~~D 206 (255)
T PRK10673 137 -AGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDG----EWRFNVPVLWDQYP---HIVGWEKIPAW--PHPALFIRGGNS 206 (255)
T ss_pred -cccccHHHHHHHHHHhcCCHHHHHHHHhcCCcc----eeEeeHHHHHHhHH---HHhCCcccCCC--CCCeEEEECCCC
Confidence 011111111111111111111122222111110 11111111111111 11112233333 389999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++++..+.+.+..++ +++++++++||++++|+|+++++.|.+||.+
T Consensus 207 ~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 207 PYVTEAYRDDLLAQFPQ--------ARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCHHHHHHHHHhCCC--------cEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999888888887776 8999999999999999999999999999974
No 7
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=100.00 E-value=3.8e-35 Score=231.88 Aligned_cols=262 Identities=17% Similarity=0.149 Sum_probs=173.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+++|.+.|+ +++|.|+++||++.++.+|+.++..|+. .||+|+|+|+||+|.|+.|... ..|++
T Consensus 30 ~gI~~h~~e~g~----~~gP~illlHGfPe~wyswr~q~~~la~--------~~~rviA~DlrGyG~Sd~P~~~-~~Yt~ 96 (322)
T KOG4178|consen 30 KGIRLHYVEGGP----GDGPIVLLLHGFPESWYSWRHQIPGLAS--------RGYRVIAPDLRGYGFSDAPPHI-SEYTI 96 (322)
T ss_pred ccEEEEEEeecC----CCCCEEEEEccCCccchhhhhhhhhhhh--------cceEEEecCCCCCCCCCCCCCc-ceeeH
Confidence 557888888876 3689999999999999999999999997 7899999999999999998864 68999
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
..++.|+..++++++.+ +++++||+||+++|+.+|..+|+ +|+++|.++.+......+.............
T Consensus 97 ~~l~~di~~lld~Lg~~-k~~lvgHDwGaivaw~la~~~Pe--------rv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~ 167 (322)
T KOG4178|consen 97 DELVGDIVALLDHLGLK-KAFLVGHDWGAIVAWRLALFYPE--------RVDGLVTLNVPFPNPKLKPLDSSKAIFGKSY 167 (322)
T ss_pred HHHHHHHHHHHHHhccc-eeEEEeccchhHHHHHHHHhChh--------hcceEEEecCCCCCcccchhhhhccccCccc
Confidence 99999999999999999 99999999999999999999999 9999999998755111111000000000000
Q ss_pred hcCCCCCCc----------HHHHHHHHHhhcc------c-----------hhHHHHHhhcccCCCcccccccChhHHHHh
Q 020518 186 QSLPSSIPS----------RKWLVNHMMELGF------S-----------KSLSEWIGTNLKKSGERETWAFNLDGAVQM 238 (325)
Q Consensus 186 ~~~~~~~~~----------~~~~~~~~~~~~~------~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (325)
.....+.+. .+.+...+..... . ....+.....+. .....-....+..+
T Consensus 168 y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~----~~g~~gplNyyrn~ 243 (322)
T KOG4178|consen 168 YICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQ----IDGFTGPLNYYRNF 243 (322)
T ss_pred eeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccc----cccccccchhhHHH
Confidence 000000000 0000000000000 0 000001111110 00011112222222
Q ss_pred hhcccCCcccccccCCCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHH
Q 020518 239 FNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEI 317 (325)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 317 (325)
.+... .....+..+. +|+++|+|+.|.+.+.. ..+...+.++++ .+.++++++||++++|+|+++++.
T Consensus 244 ~r~w~--a~~~~~~~i~--iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l-------~~~vv~~~~gH~vqqe~p~~v~~~ 312 (322)
T KOG4178|consen 244 RRNWE--AAPWALAKIT--IPVLFIWGDLDPVLPYPIFGELYRKDVPRL-------TERVVIEGIGHFVQQEKPQEVNQA 312 (322)
T ss_pred hhCch--hccccccccc--cceEEEEecCcccccchhHHHHHHHhhccc-------cceEEecCCcccccccCHHHHHHH
Confidence 22211 1122333343 89999999999988765 455566666652 478899999999999999999999
Q ss_pred HHHHHhc
Q 020518 318 VAPRIAS 324 (325)
Q Consensus 318 i~~fl~~ 324 (325)
|.+|+++
T Consensus 313 i~~f~~~ 319 (322)
T KOG4178|consen 313 ILGFINS 319 (322)
T ss_pred HHHHHHh
Confidence 9999975
No 8
>PRK10349 carboxylesterase BioH; Provisional
Probab=100.00 E-value=6e-35 Score=237.64 Aligned_cols=248 Identities=19% Similarity=0.216 Sum_probs=161.9
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.++|..+|.+ .|+|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+ ..++++++
T Consensus 3 ~~~y~~~G~g-----~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~vi~~Dl~G~G~S~~~----~~~~~~~~ 64 (256)
T PRK10349 3 NIWWQTKGQG-----NVHLVLLHGWGLNAEVWRCIDEELS---------SHFTLHLVDLPGFGRSRGF----GALSLADM 64 (256)
T ss_pred ccchhhcCCC-----CCeEEEECCCCCChhHHHHHHHHHh---------cCCEEEEecCCCCCCCCCC----CCCCHHHH
Confidence 4677777752 3579999999999999999999998 6799999999999999864 35788888
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++++.+ ++.+ +++++||||||.+++.+|.++|+ +|+++|++++.+..................+...
T Consensus 65 ~~~l~~----~~~~-~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (256)
T PRK10349 65 AEAVLQ----QAPD-KAIWLGWSLGGLVASQIALTHPE--------RVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQ 131 (256)
T ss_pred HHHHHh----cCCC-CeEEEEECHHHHHHHHHHHhChH--------hhheEEEecCccceecCCCCCcccHHHHHHHHHH
Confidence 877654 5667 99999999999999999999999 9999999998654321111111111111111000
Q ss_pred CCCCCcHHHHHHHHHhh-cc-----chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 189 PSSIPSRKWLVNHMMEL-GF-----SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
... ........+... .. ......+.......... ...........+...+....+..++ +|+++
T Consensus 132 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~i~--~P~li 201 (256)
T PRK10349 132 LSD--DFQRTVERFLALQTMGTETARQDARALKKTVLALPMP------EVDVLNGGLEILKTVDLRQPLQNVS--MPFLR 201 (256)
T ss_pred HHh--chHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCC------cHHHHHHHHHHHHhCccHHHHhhcC--CCeEE
Confidence 000 000011111100 00 00111111100000000 0111111111222334445566555 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
|+|++|.+++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+|-++|
T Consensus 202 i~G~~D~~~~~~~~~~~~~~i~~--------~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~~~ 256 (256)
T PRK10349 202 LYGYLDGLVPRKVVPMLDKLWPH--------SESYIFAKAAHAPFISHPAEFCHLLVALKQRV 256 (256)
T ss_pred EecCCCccCCHHHHHHHHHhCCC--------CeEEEeCCCCCCccccCHHHHHHHHHHHhccC
Confidence 99999999998888877777766 99999999999999999999999999997664
No 9
>PLN02965 Probable pheophorbidase
Probab=100.00 E-value=1.2e-34 Score=235.36 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=157.8
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
.|||+||++.+...|..+++.|.+ .+|+|+++|+||||.|..+.. ..++++++++|+.+++++++..+++
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~--------~~~~via~Dl~G~G~S~~~~~--~~~~~~~~a~dl~~~l~~l~~~~~~ 74 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDA--------AGFKSTCVDLTGAGISLTDSN--TVSSSDQYNRPLFALLSDLPPDHKV 74 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhh--------CCceEEEecCCcCCCCCCCcc--ccCCHHHHHHHHHHHHHhcCCCCCE
Confidence 599999999999999999999965 789999999999999986543 4688999999999999999863399
Q ss_pred EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC-----CC--CCCc----
Q 020518 126 VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL-----PS--SIPS---- 194 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~---- 194 (325)
+++||||||.+++.+|.++|+ +|+++|++++........ ............... .. ....
T Consensus 75 ~lvGhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (255)
T PLN02965 75 ILVGHSIGGGSVTEALCKFTD--------KISMAIYVAAAMVKPGSI-ISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIM 145 (255)
T ss_pred EEEecCcchHHHHHHHHhCch--------heeEEEEEccccCCCCCC-ccHHHHhhhhccccceeeeeccCCCCCcchhh
Confidence 999999999999999999999 999999999863211111 011111101000000 00 0000
Q ss_pred -HHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh
Q 020518 195 -RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP 273 (325)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 273 (325)
...................+......... ..... ... +....+..+ ++|+++|+|++|..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~----~~~--~~~~~~~~i--~vP~lvi~g~~D~~~~~ 209 (255)
T PLN02965 146 MKPEFVRHYYYNQSPLEDYTLSSKLLRPAP--------VRAFQ----DLD--KLPPNPEAE--KVPRVYIKTAKDNLFDP 209 (255)
T ss_pred cCHHHHHHHHhcCCCHHHHHHHHHhcCCCC--------Ccchh----hhh--hccchhhcC--CCCEEEEEcCCCCCCCH
Confidence 00010000000000000000000000000 00000 000 111122233 48999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
...+.+.+.+++ ++++++++|||++++|+|++|++.|.+|++++
T Consensus 210 ~~~~~~~~~~~~--------a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~~ 253 (255)
T PLN02965 210 VRQDVMVENWPP--------AQTYVLEDSDHSAFFSVPTTLFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHhCCc--------ceEEEecCCCCchhhcCHHHHHHHHHHHHHHh
Confidence 988888887776 89999999999999999999999999999764
No 10
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=100.00 E-value=9.2e-34 Score=224.24 Aligned_cols=269 Identities=35% Similarity=0.562 Sum_probs=226.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+-.++.|..+....+-...|+++++||+.++...|..+...|+..+ +..|+++|.|.||.|... ...+.
T Consensus 34 ~p~~l~y~~~~~~~~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l-------~~~v~~vd~RnHG~Sp~~----~~h~~ 102 (315)
T KOG2382|consen 34 GPVRLAYDSVYSSENLERAPPAIILHGLLGSKENWRSVAKNLSRKL-------GRDVYAVDVRNHGSSPKI----TVHNY 102 (315)
T ss_pred CCcccceeeeecccccCCCCceEEecccccCCCCHHHHHHHhcccc-------cCceEEEecccCCCCccc----cccCH
Confidence 3467888876444444568999999999999999999999999865 559999999999999987 46779
Q ss_pred HHHHHHHHHHHHHhC----CCCCEEEEEeChhH-HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 106 ANAANDLANLVKAKG----WDWPDVVIGHSMGG-KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg-~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+++++|+..|++..+ .. +++++|||||| .+++..+..+|+ .+.++|+++.+|.. ..........
T Consensus 103 ~~ma~dv~~Fi~~v~~~~~~~-~~~l~GHsmGG~~~~m~~t~~~p~--------~~~rliv~D~sP~~--~~~~~~e~~e 171 (315)
T KOG2382|consen 103 EAMAEDVKLFIDGVGGSTRLD-PVVLLGHSMGGVKVAMAETLKKPD--------LIERLIVEDISPGG--VGRSYGEYRE 171 (315)
T ss_pred HHHHHHHHHHHHHcccccccC-CceecccCcchHHHHHHHHHhcCc--------ccceeEEEecCCcc--CCcccchHHH
Confidence 999999999999885 45 99999999999 888889999999 99999999988763 3334445556
Q ss_pred HHHHhhcCCCC---CCcHHHHHHHHHhhccchhHHHHHhhccc--CCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 181 VLQTLQSLPSS---IPSRKWLVNHMMELGFSKSLSEWIGTNLK--KSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 181 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
.+..+...... ...+.+....+........+.+|+..++. .......|.++.......+..+....++..+...+
T Consensus 172 ~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~ 251 (315)
T KOG2382|consen 172 LIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGP 251 (315)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccc
Confidence 66666655554 57778888888888888888899999887 55667789999999999988877777777776655
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...||++|.|.++..++.+....+.+.++. ++++.+++||||+|.|+|++|.+.|.+|+..
T Consensus 252 ~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~--------~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl~~ 312 (315)
T KOG2382|consen 252 YTGPVLFIKGLQSKFVPDEHYPRMEKIFPN--------VEVHELDEAGHWVHLEKPEEFIESISEFLEE 312 (315)
T ss_pred cccceeEEecCCCCCcChhHHHHHHHhccc--------hheeecccCCceeecCCHHHHHHHHHHHhcc
Confidence 568999999999999999989999999988 9999999999999999999999999999864
No 11
>PRK03204 haloalkane dehalogenase; Provisional
Probab=100.00 E-value=2e-34 Score=237.33 Aligned_cols=252 Identities=18% Similarity=0.204 Sum_probs=163.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|...|. +++|||+||++.+...|..+++.|. ++|+|+++|+||||.|+.+.. ..+++
T Consensus 22 ~~~~i~y~~~G~------~~~iv~lHG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~ 84 (286)
T PRK03204 22 SRGRIHYIDEGT------GPPILLCHGNPTWSFLYRDIIVALR---------DRFRCVAPDYLGFGLSERPSG--FGYQI 84 (286)
T ss_pred CCcEEEEEECCC------CCEEEEECCCCccHHHHHHHHHHHh---------CCcEEEEECCCCCCCCCCCCc--cccCH
Confidence 457899998774 6799999999998889999999888 679999999999999987654 46899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++.+++++++.+ +++++||||||.+++.++.++|+ +|+++|++++..... .... ......+
T Consensus 85 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~va~~~a~~~p~--------~v~~lvl~~~~~~~~-~~~~----~~~~~~~ 150 (286)
T PRK03204 85 DEHARVIGEFVDHLGLD-RYLSMGQDWGGPISMAVAVERAD--------RVRGVVLGNTWFWPA-DTLA----MKAFSRV 150 (286)
T ss_pred HHHHHHHHHHHHHhCCC-CEEEEEECccHHHHHHHHHhChh--------heeEEEEECccccCC-Cchh----HHHHHHH
Confidence 99999999999999998 99999999999999999999999 999999987643111 0000 0111111
Q ss_pred h-cCCCC--CCcHHHHHHHHHhhc----cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC-----CcccccccC
Q 020518 186 Q-SLPSS--IPSRKWLVNHMMELG----FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE-----MSYWPLLEH 253 (325)
Q Consensus 186 ~-~~~~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 253 (325)
. ..... ..........+.... .......+........ .. ......+...+.. ......+..
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (286)
T PRK03204 151 MSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNA----AA---RRGVAEMPKQILAARPLLARLAREVPA 223 (286)
T ss_pred hccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCH----HH---HHHHHHHHHhcchhhHHHHHhhhhhhh
Confidence 0 00000 000000111111100 0000011110000000 00 0000000000000 000011111
Q ss_pred CCCCCcEEEEeeCCCCCCChH-HHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 254 PPQGMEIAIVRAEKSDRWDPD-VIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
...++|+++|+|++|..+++. ..+.+.+.+++ +++++++++||++++|+|+++++.|.+||.
T Consensus 224 ~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~--------~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~~ 286 (286)
T PRK03204 224 TLGTKPTLLVWGMKDVAFRPKTILPRLRATFPD--------HVLVELPNAKHFIQEDAPDRIAAAIIERFG 286 (286)
T ss_pred hcCCCCeEEEecCCCcccCcHHHHHHHHHhcCC--------CeEEEcCCCcccccccCHHHHHHHHHHhcC
Confidence 112589999999999988664 46777777776 899999999999999999999999999973
No 12
>PLN02578 hydrolase
Probab=100.00 E-value=7.1e-34 Score=240.85 Aligned_cols=257 Identities=16% Similarity=0.229 Sum_probs=168.6
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.|.+++|.+.|+ +++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+. ..++.
T Consensus 74 ~~~~i~Y~~~g~------g~~vvliHG~~~~~~~w~~~~~~l~---------~~~~v~~~D~~G~G~S~~~~---~~~~~ 135 (354)
T PLN02578 74 RGHKIHYVVQGE------GLPIVLIHGFGASAFHWRYNIPELA---------KKYKVYALDLLGFGWSDKAL---IEYDA 135 (354)
T ss_pred CCEEEEEEEcCC------CCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCcc---cccCH
Confidence 467889988764 5789999999999999999999998 67999999999999999875 57899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch--------hH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE--------GE 177 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~--------~~ 177 (325)
+.+++++.++++++..+ +++++||||||.+++.+|.++|+ +|+++|++++++......... ..
T Consensus 136 ~~~a~~l~~~i~~~~~~-~~~lvG~S~Gg~ia~~~A~~~p~--------~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~ 206 (354)
T PLN02578 136 MVWRDQVADFVKEVVKE-PAVLVGNSLGGFTALSTAVGYPE--------LVAGVALLNSAGQFGSESREKEEAIVVEETV 206 (354)
T ss_pred HHHHHHHHHHHHHhccC-CeEEEEECHHHHHHHHHHHhChH--------hcceEEEECCCccccccccccccccccccch
Confidence 99999999999999988 99999999999999999999999 999999998765332111000 00
Q ss_pred HHH-HHHHhh----cCC-----CCCCcHHHHHHHHHhhccc--hhHHHHHhhcccCCCcccccccChhHHHHhhhc----
Q 020518 178 VEK-VLQTLQ----SLP-----SSIPSRKWLVNHMMELGFS--KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---- 241 (325)
Q Consensus 178 ~~~-~~~~~~----~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 241 (325)
... ....+. ... ....... .........+. ....+++............ ....+...+..
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~ 282 (354)
T PLN02578 207 LTRFVVKPLKEWFQRVVLGFLFWQAKQPS-RIESVLKSVYKDKSNVDDYLVESITEPAADPN---AGEVYYRLMSRFLFN 282 (354)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHHhcCHH-HHHHHHHHhcCCcccCCHHHHHHHHhcccCCc---hHHHHHHHHHHHhcC
Confidence 000 000000 000 0000000 00000000000 0000111100000000000 00111111111
Q ss_pred ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 242 YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
....+....+..++ +|+++|+|++|..++++..+.+.+.+++ ++++++ ++||++++|+|+++++.|.+|
T Consensus 283 ~~~~~~~~~l~~i~--~PvLiI~G~~D~~v~~~~~~~l~~~~p~--------a~l~~i-~~GH~~~~e~p~~~~~~I~~f 351 (354)
T PLN02578 283 QSRYTLDSLLSKLS--CPLLLLWGDLDPWVGPAKAEKIKAFYPD--------TTLVNL-QAGHCPHDEVPEQVNKALLEW 351 (354)
T ss_pred CCCCCHHHHhhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC--------CEEEEe-CCCCCccccCHHHHHHHHHHH
Confidence 11222334455554 8999999999999999888888887765 889889 589999999999999999999
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
+++
T Consensus 352 l~~ 354 (354)
T PLN02578 352 LSS 354 (354)
T ss_pred HhC
Confidence 964
No 13
>PRK06489 hypothetical protein; Provisional
Probab=100.00 E-value=7.6e-34 Score=241.39 Aligned_cols=278 Identities=18% Similarity=0.228 Sum_probs=171.0
Q ss_pred cCCccccccceEEEEcccCCC---CCCCceEEEecCCCCCCCChH--HHHHHHHhhhhccC-CCCceEEEEeCCCCCCCC
Q 020518 20 NSPTTRSLQTLAYEEVRSSSD---RPYTSTAFVLHGLLGSGRNWR--SFSRNLASTLSQTS-ASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 20 ~~~~~~~~~~l~y~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~-~~~~~~vi~~D~~G~G~S 93 (325)
.+....+|.+++|.++|.+.. ...+|+|||+||++++...|. .+.+.|.... .. ..++|+||++|+||||.|
T Consensus 42 ~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~--~~l~~~~~~Via~Dl~GhG~S 119 (360)
T PRK06489 42 HSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPG--QPLDASKYFIILPDGIGHGKS 119 (360)
T ss_pred cCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCC--CcccccCCEEEEeCCCCCCCC
Confidence 334556788999999986310 011689999999999988886 5555541000 00 017899999999999999
Q ss_pred CCCCCC----CCCCCHHHHHHHHHHHH-HHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGL----DPPHDIANAANDLANLV-KAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~----~~~~~~~~~~~~l~~~l-~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+.+. ...++++++++++.+++ ++++++ +++ ++||||||++|+.+|.++|+ +|+++|++++.+.
T Consensus 120 ~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~-~~~~lvG~SmGG~vAl~~A~~~P~--------~V~~LVLi~s~~~ 190 (360)
T PRK06489 120 SKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVK-HLRLILGTSMGGMHAWMWGEKYPD--------FMDALMPMASQPT 190 (360)
T ss_pred CCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCC-ceeEEEEECHHHHHHHHHHHhCch--------hhheeeeeccCcc
Confidence 876421 01589999999988865 889998 875 89999999999999999999 9999999988643
Q ss_pred CCCCCCchhHHHHHHHHhhcCCC----CCCcHH-HHHHHH--H---h----------hccchhHHHHHhhcccCCCcccc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPS----SIPSRK-WLVNHM--M---E----------LGFSKSLSEWIGTNLKKSGERET 227 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~--~---~----------~~~~~~~~~~~~~~~~~~~~~~~ 227 (325)
........ ........+..... ...... ...... . . .........++........
T Consensus 191 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 265 (360)
T PRK06489 191 EMSGRNWM-WRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPV---- 265 (360)
T ss_pred cccHHHHH-HHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhh----
Confidence 22111100 00111111111100 000000 000000 0 0 0000001111111110000
Q ss_pred cccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH--HHHHHHhhhcCCCCCCceeEEEecCC---
Q 020518 228 WAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI--QRLEGLANRQGDGSEGKVSVHVLPNA--- 302 (325)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--- 302 (325)
......+..........+....+.+++ +|+|+|+|++|..++++.. +.+.+.+++ ++++++++|
T Consensus 266 -~~~~~~~~~~~~~~~~~d~~~~L~~I~--~PvLvI~G~~D~~~p~~~~~~~~la~~ip~--------a~l~~i~~a~~~ 334 (360)
T PRK06489 266 -TADANDFLYQWDSSRDYNPSPDLEKIK--APVLAINSADDERNPPETGVMEAALKRVKH--------GRLVLIPASPET 334 (360)
T ss_pred -hcCHHHHHHHHHHhhccChHHHHHhCC--CCEEEEecCCCcccChhhHHHHHHHHhCcC--------CeEEEECCCCCC
Confidence 001112212222222334455666665 8999999999999988754 566666665 899999996
Q ss_pred -CccccccChHHHHHHHHHHHhcC
Q 020518 303 -GHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 303 -gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
||+++ |+|++|++.|.+||+.+
T Consensus 335 ~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 335 RGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCcccc-cCHHHHHHHHHHHHHhc
Confidence 99997 89999999999999864
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=100.00 E-value=1.8e-33 Score=241.57 Aligned_cols=270 Identities=15% Similarity=0.156 Sum_probs=169.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++.+++|...++.. .+.+++|||+||++++...|.. +++.|.+... ++|+|+++|+||||.|+.+.. ..++
T Consensus 184 ~~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~-----~~yrVia~Dl~G~G~S~~p~~--~~yt 255 (481)
T PLN03087 184 SNESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETLFPNFSDAAK-----STYRLFAVDLLGFGRSPKPAD--SLYT 255 (481)
T ss_pred CCeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHHHHHHHHHhh-----CCCEEEEECCCCCCCCcCCCC--CcCC
Confidence 44689999988742 2346899999999999999985 4566663221 689999999999999987754 5689
Q ss_pred HHHHHHHHH-HHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 105 IANAANDLA-NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 105 ~~~~~~~l~-~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++++++++. .++++++.+ +++++||||||++++.+|.++|+ +|+++|+++++........ ........
T Consensus 256 l~~~a~~l~~~ll~~lg~~-k~~LVGhSmGG~iAl~~A~~~Pe--------~V~~LVLi~~~~~~~~~~~--~~~~~~~~ 324 (481)
T PLN03087 256 LREHLEMIERSVLERYKVK-SFHIVAHSLGCILALALAVKHPG--------AVKSLTLLAPPYYPVPKGV--QATQYVMR 324 (481)
T ss_pred HHHHHHHHHHHHHHHcCCC-CEEEEEECHHHHHHHHHHHhChH--------hccEEEEECCCccccccch--hHHHHHHH
Confidence 999999994 899999999 99999999999999999999999 9999999997643322111 00111111
Q ss_pred HhhcCC--CCCC--c-HHHHHHHHHhhc-----cchhHHHHHhhcccCCCccccc---------ccChhHHHHhhhccc-
Q 020518 184 TLQSLP--SSIP--S-RKWLVNHMMELG-----FSKSLSEWIGTNLKKSGERETW---------AFNLDGAVQMFNSYR- 243 (325)
Q Consensus 184 ~~~~~~--~~~~--~-~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~- 243 (325)
...... .... . ............ ......+++............. .........+.....
T Consensus 325 ~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~ 404 (481)
T PLN03087 325 KVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGS 404 (481)
T ss_pred HhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhh
Confidence 110000 0000 0 000000000000 0000011110000000000000 000000000010000
Q ss_pred --CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHH
Q 020518 244 --EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAP 320 (325)
Q Consensus 244 --~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~ 320 (325)
..........++ +|+++|+|++|..+|++..+.+++.+++ +++++++++||++++ |+|++|++.|.+
T Consensus 405 ~l~~~l~~l~~~I~--vPtLII~Ge~D~ivP~~~~~~la~~iP~--------a~l~vI~~aGH~~~v~e~p~~fa~~L~~ 474 (481)
T PLN03087 405 KLDGYLDHVRDQLK--CDVAIFHGGDDELIPVECSYAVKAKVPR--------ARVKVIDDKDHITIVVGRQKEFARELEE 474 (481)
T ss_pred hhhhHHHHHHHhCC--CCEEEEEECCCCCCCHHHHHHHHHhCCC--------CEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 000111122344 8999999999999999998888888876 999999999999986 999999999999
Q ss_pred HHhc
Q 020518 321 RIAS 324 (325)
Q Consensus 321 fl~~ 324 (325)
|.++
T Consensus 475 F~~~ 478 (481)
T PLN03087 475 IWRR 478 (481)
T ss_pred Hhhc
Confidence 9864
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=100.00 E-value=1.4e-33 Score=229.85 Aligned_cols=253 Identities=18% Similarity=0.237 Sum_probs=168.1
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHH
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA 109 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~ 109 (325)
++|..+|++ .+++|+|||+||+++++..|..+++.|. ++|+|+++|+||||.|..+.. ..+++++++
T Consensus 1 ~~~~~~~~~--~~~~~~iv~lhG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~ 67 (257)
T TIGR03611 1 MHYELHGPP--DADAPVVVLSSGLGGSGSYWAPQLDVLT---------QRFHVVTYDHRGTGRSPGELP--PGYSIAHMA 67 (257)
T ss_pred CEEEEecCC--CCCCCEEEEEcCCCcchhHHHHHHHHHH---------hccEEEEEcCCCCCCCCCCCc--ccCCHHHHH
Confidence 467777753 2357899999999999999999988887 689999999999999987654 678999999
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
+++.+++++++.+ +++++||||||.+++.++.++|+ +|+++|++++....... ...........+....
T Consensus 68 ~~~~~~i~~~~~~-~~~l~G~S~Gg~~a~~~a~~~~~--------~v~~~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 136 (257)
T TIGR03611 68 DDVLQLLDALNIE-RFHFVGHALGGLIGLQLALRYPE--------RLLSLVLINAWSRPDPH--TRRCFDVRIALLQHAG 136 (257)
T ss_pred HHHHHHHHHhCCC-cEEEEEechhHHHHHHHHHHChH--------HhHHheeecCCCCCChh--HHHHHHHHHHHHhccC
Confidence 9999999999988 99999999999999999999999 99999999976433211 0001111111111100
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccC----CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKK----SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
.. ..........+. ..|+...... ........................+....+..++ +|+++++|
T Consensus 137 ~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~--~P~l~i~g 206 (257)
T TIGR03611 137 PE-----AYVHAQALFLYP---ADWISENAARLAADEAHALAHFPGKANVLRRINALEAFDVSARLDRIQ--HPVLLIAN 206 (257)
T ss_pred cc-----hhhhhhhhhhcc---ccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHcCCcHHHhcccC--ccEEEEec
Confidence 00 000000000000 0000000000 0000000000111111112222223334455554 89999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|..++++..+.+.+..++ ++++.++++||++++++|+++++.|.+||++
T Consensus 207 ~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~~ 257 (257)
T TIGR03611 207 RDDMLVPYTQSLRLAAALPN--------AQLKLLPYGGHASNVTDPETFNRALLDFLKT 257 (257)
T ss_pred CcCcccCHHHHHHHHHhcCC--------ceEEEECCCCCCccccCHHHHHHHHHHHhcC
Confidence 99999999888777776655 8999999999999999999999999999974
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=100.00 E-value=1.6e-33 Score=232.81 Aligned_cols=249 Identities=15% Similarity=0.187 Sum_probs=159.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH---HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS---RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
+.+++|...|. +++|||+||++++...|..+. ..+.+ .+|+|+++|+||||.|+.+.. ...
T Consensus 19 ~~~~~y~~~g~------~~~ivllHG~~~~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~~~~--~~~ 82 (282)
T TIGR03343 19 NFRIHYNEAGN------GEAVIMLHGGGPGAGGWSNYYRNIGPFVD--------AGYRVILKDSPGFNKSDAVVM--DEQ 82 (282)
T ss_pred ceeEEEEecCC------CCeEEEECCCCCchhhHHHHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCcC--ccc
Confidence 45688887663 578999999999888887543 34443 689999999999999987532 111
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC--CCchhHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT--ENSEGEVEKV 181 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~--~~~~~~~~~~ 181 (325)
....+++++.++++.++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... ..........
T Consensus 83 ~~~~~~~~l~~~l~~l~~~-~~~lvG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 153 (282)
T TIGR03343 83 RGLVNARAVKGLMDALDIE-KAHLVGNSMGGATALNFALEYPD--------RIGKLILMGPGGLGPSLFAPMPMEGIKLL 153 (282)
T ss_pred ccchhHHHHHHHHHHcCCC-CeeEEEECchHHHHHHHHHhChH--------hhceEEEECCCCCCccccccCchHHHHHH
Confidence 2225789999999999999 99999999999999999999999 99999999975321110 0000111111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhcc-----chhHHHHHhhcccCCCcccccccChhHHHHhhh-----cccCCcccccc
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGF-----SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFN-----SYREMSYWPLL 251 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 251 (325)
...+ .. .........+....+ .....+........ .......... .+...+....+
T Consensus 154 ~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l 219 (282)
T TIGR03343 154 FKLY---AE--PSYETLKQMLNVFLFDQSLITEELLQGRWENIQR---------QPEHLKNFLISSQKAPLSTWDVTARL 219 (282)
T ss_pred HHHh---cC--CCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhc---------CHHHHHHHHHhccccccccchHHHHH
Confidence 1110 00 000001100000000 00000000000000 0000001100 01111223344
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+++ +|+++|+|++|..++++..+.+.+.+++ +++++++++||++++|+|++|++.|.+||++
T Consensus 220 ~~i~--~Pvlli~G~~D~~v~~~~~~~~~~~~~~--------~~~~~i~~agH~~~~e~p~~~~~~i~~fl~~ 282 (282)
T TIGR03343 220 GEIK--AKTLVTWGRDDRFVPLDHGLKLLWNMPD--------AQLHVFSRCGHWAQWEHADAFNRLVIDFLRN 282 (282)
T ss_pred hhCC--CCEEEEEccCCCcCCchhHHHHHHhCCC--------CEEEEeCCCCcCCcccCHHHHHHHHHHHhhC
Confidence 5555 8999999999999999888888877765 9999999999999999999999999999964
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=100.00 E-value=3.6e-33 Score=230.28 Aligned_cols=255 Identities=21% Similarity=0.282 Sum_probs=169.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++.+++|.+.|+. ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+.. ..+++
T Consensus 14 ~~~~~~~~~~g~~----~~~~vv~~hG~~~~~~~~~~~~~~l~---------~~~~vi~~D~~G~G~S~~~~~--~~~~~ 78 (278)
T TIGR03056 14 GPFHWHVQDMGPT----AGPLLLLLHGTGASTHSWRDLMPPLA---------RSFRVVAPDLPGHGFTRAPFR--FRFTL 78 (278)
T ss_pred CCEEEEEEecCCC----CCCeEEEEcCCCCCHHHHHHHHHHHh---------hCcEEEeecCCCCCCCCCccc--cCCCH
Confidence 6778999988763 46899999999999999999999988 679999999999999987654 47899
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC--chhHHHHHHH
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN--SEGEVEKVLQ 183 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~--~~~~~~~~~~ 183 (325)
+++++++.+++++++.+ +++|+||||||.+++.+|.++|+ +++++|++++......... ........
T Consensus 79 ~~~~~~l~~~i~~~~~~-~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~v~~~~~~~~~~~~~~~~~~~~~~~-- 147 (278)
T TIGR03056 79 PSMAEDLSALCAAEGLS-PDGVIGHSAGAAIALRLALDGPV--------TPRMVVGINAALMPFEGMAGTLFPYMARV-- 147 (278)
T ss_pred HHHHHHHHHHHHHcCCC-CceEEEECccHHHHHHHHHhCCc--------ccceEEEEcCcccccccccccccchhhHh--
Confidence 99999999999999988 99999999999999999999999 9999999987643221100 00000000
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCc-cc-------ccccChhHHHHhhhcccCCcccccccCCC
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGE-RE-------TWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
+.... . ......... ........+.......... .. ...............+........+..+
T Consensus 148 -~~~~~-~---~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i- 219 (278)
T TIGR03056 148 -LACNP-F---TPPMMSRGA--ADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRI- 219 (278)
T ss_pred -hhhcc-c---chHHHHhhc--ccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccC-
Confidence 00000 0 000000000 0000000000000000000 00 0000001111111111111122234444
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++|+++|+|++|..++++..+.+.+.+++ ++++.++++||++++|.|+++++.|.+|++
T Consensus 220 -~~P~lii~g~~D~~vp~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 220 -TIPLHLIAGEEDKAVPPDESKRAATRVPT--------ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred -CCCEEEEEeCCCcccCHHHHHHHHHhccC--------CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 48999999999999999888888777665 899999999999999999999999999984
No 18
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=233.17 Aligned_cols=261 Identities=14% Similarity=0.117 Sum_probs=167.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~ 103 (325)
.++.+++|.+.|+. ++++|||+||++++...|..+++.|+ ++|+|+++|+||||.|+.+... ...+
T Consensus 112 ~~~~~~~y~~~G~~----~~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~Via~DlpG~G~S~~p~~~~~~~y 178 (383)
T PLN03084 112 SDLFRWFCVESGSN----NNPPVLLIHGFPSQAYSYRKVLPVLS---------KNYHAIAFDWLGFGFSDKPQPGYGFNY 178 (383)
T ss_pred CCceEEEEEecCCC----CCCeEEEECCCCCCHHHHHHHHHHHh---------cCCEEEEECCCCCCCCCCCcccccccC
Confidence 57889999998863 46899999999999999999999988 7899999999999999887531 1368
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++++.+++++++++ +++|+|||+||.+++.+|.++|+ +|+++|+++++...... ........+..
T Consensus 179 s~~~~a~~l~~~i~~l~~~-~~~LvG~s~GG~ia~~~a~~~P~--------~v~~lILi~~~~~~~~~-~~p~~l~~~~~ 248 (383)
T PLN03084 179 TLDEYVSSLESLIDELKSD-KVSLVVQGYFSPPVVKYASAHPD--------KIKKLILLNPPLTKEHA-KLPSTLSEFSN 248 (383)
T ss_pred CHHHHHHHHHHHHHHhCCC-CceEEEECHHHHHHHHHHHhChH--------hhcEEEEECCCCccccc-cchHHHHHHHH
Confidence 9999999999999999999 99999999999999999999999 99999999986432110 01111111100
Q ss_pred Hhhc-CCCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCC------cccccccC
Q 020518 184 TLQS-LPSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREM------SYWPLLEH 253 (325)
Q Consensus 184 ~~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 253 (325)
.+.. ...... .......+.... ..+............... .. .....+...+... +....+..
T Consensus 249 ~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~---~~---~~l~~~~r~~~~~l~~~~~~l~~~l~~ 321 (383)
T PLN03084 249 FLLGEIFSQDP-LRASDKALTSCGPYAMKEDDAMVYRRPYLTSGS---SG---FALNAISRSMKKELKKYIEEMRSILTD 321 (383)
T ss_pred HHhhhhhhcch-HHHHhhhhcccCccCCCHHHHHHHhccccCCcc---hH---HHHHHHHHHhhcccchhhHHHHhhhcc
Confidence 0000 000000 000000000000 000000011100000000 00 0000111111100 01111111
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...++|+++|+|++|..++++..+.+.+.. + ++++++++|||++++|+|+++++.|.+||+.
T Consensus 322 ~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~-~--------a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 322 KNWKTPITVCWGLRDRWLNYDGVEDFCKSS-Q--------HKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred ccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-C--------CeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 123589999999999999987776666652 3 8999999999999999999999999999863
No 19
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=100.00 E-value=1.2e-32 Score=233.36 Aligned_cols=264 Identities=17% Similarity=0.143 Sum_probs=168.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+|.+|+|..+++.. .+.+++|||+||++++... |..++..|++ .||+|+++|+||||.|+.+.. ...
T Consensus 69 ~~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~--~~~ 137 (349)
T PLN02385 69 SRGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIARKIAS--------SGYGVFAMDYPGFGLSEGLHG--YIP 137 (349)
T ss_pred CCCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCC--CcC
Confidence 468899999988642 2357899999999988765 5788888986 799999999999999987643 346
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++++++|+.++++.+... .+++|+||||||++++.++.++|+ +|+++|++++..............
T Consensus 138 ~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~--------~v~glVLi~p~~~~~~~~~~~~~~ 209 (349)
T PLN02385 138 SFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPN--------AWDGAILVAPMCKIADDVVPPPLV 209 (349)
T ss_pred CHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcc--------hhhheeEecccccccccccCchHH
Confidence 8999999999999877532 279999999999999999999999 999999999865432111111111
Q ss_pred HHHHHHhhcCCCCC--CcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 179 EKVLQTLQSLPSSI--PSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 179 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
......+....... .......... +............. ..............++... .+....+..++
T Consensus 210 ~~~~~~~~~~~p~~~~~~~~~~~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~--~~~~~~l~~i~- 279 (349)
T PLN02385 210 LQILILLANLLPKAKLVPQKDLAELA----FRDLKKRKMAEYNV---IAYKDKPRLRTAVELLRTT--QEIEMQLEEVS- 279 (349)
T ss_pred HHHHHHHHHHCCCceecCCCcccccc----ccCHHHHHHhhcCc---ceeCCCcchHHHHHHHHHH--HHHHHhcccCC-
Confidence 12221111111000 0000000000 00000000000000 0000000111111122111 12223344554
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH----HHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----LLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 324 (325)
+|+|+|+|++|.++++...+.+.+.+.. +++++++++++||+++.|+|++ +++.|.+||++
T Consensus 280 -~P~Lii~G~~D~vv~~~~~~~l~~~~~~------~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~ 344 (349)
T PLN02385 280 -LPLLILHGEADKVTDPSVSKFLYEKASS------SDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDS 344 (349)
T ss_pred -CCEEEEEeCCCCccChHHHHHHHHHcCC------CCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHH
Confidence 8999999999999999888877776642 1279999999999999999987 88889999974
No 20
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=2.3e-32 Score=230.92 Aligned_cols=259 Identities=17% Similarity=0.161 Sum_probs=159.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCC------------ChHHHHH---HHHhhhhccCCCCceEEEEeCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR------------NWRSFSR---NLASTLSQTSASSEWRMVLVDLRNH 90 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~------------~~~~~~~---~l~~~~~~~~~~~~~~vi~~D~~G~ 90 (325)
++.+++|...|.. ++|+||+||+.++.. .|..++. .|.. ++|+||++|+|||
T Consensus 44 ~~~~l~y~~~G~~-----~~p~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~--------~~~~Vi~~Dl~G~ 110 (343)
T PRK08775 44 EDLRLRYELIGPA-----GAPVVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDP--------ARFRLLAFDFIGA 110 (343)
T ss_pred CCceEEEEEeccC-----CCCEEEEecCCCcccccccccCCCCCCcchhccCCCCccCc--------cccEEEEEeCCCC
Confidence 6788999998863 446777777766665 6887775 4532 6899999999999
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
|.|.. ..++++++++|+.++++++++++.++|+||||||++|+.+|.++|+ +|+++|++++.+....
T Consensus 111 g~s~~-----~~~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~--------~V~~LvLi~s~~~~~~ 177 (343)
T PRK08775 111 DGSLD-----VPIDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPA--------RVRTLVVVSGAHRAHP 177 (343)
T ss_pred CCCCC-----CCCCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChH--------hhheEEEECccccCCH
Confidence 98843 4578899999999999999997235799999999999999999999 9999999998653211
Q ss_pred CCCchhHHHHHHHHhhcCCCCC---CcHHHHHHHH--HhhccchhHHHHHhhcccCCCc---------------cccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSI---PSRKWLVNHM--MELGFSKSLSEWIGTNLKKSGE---------------RETWAF 230 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 230 (325)
................... .......... ............+......... ......
T Consensus 178 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 254 (343)
T PRK08775 178 ---YAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVART 254 (343)
T ss_pred ---HHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhc
Confidence 0101111111111111000 0000000000 0000000011111100000000 000000
Q ss_pred ChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHh-hhcCCCCCCceeEEEecC-CCccccc
Q 020518 231 NLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLA-NRQGDGSEGKVSVHVLPN-AGHWVHV 308 (325)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~gH~~~~ 308 (325)
.............. ....+.+++ +|+|+|+|++|..++++..+.+.+.+ ++ ++++++++ +||++++
T Consensus 255 ~~~~~~~~~~~~~~--~~~~l~~I~--~PtLvi~G~~D~~~p~~~~~~~~~~i~p~--------a~l~~i~~~aGH~~~l 322 (343)
T PRK08775 255 PVNAYLRLSESIDL--HRVDPEAIR--VPTVVVAVEGDRLVPLADLVELAEGLGPR--------GSLRVLRSPYGHDAFL 322 (343)
T ss_pred ChhHHHHHHHHHhh--cCCChhcCC--CCeEEEEeCCCEeeCHHHHHHHHHHcCCC--------CeEEEEeCCccHHHHh
Confidence 01111111111000 011234444 89999999999999988777776655 34 89999985 9999999
Q ss_pred cChHHHHHHHHHHHhcC
Q 020518 309 DNPKGLLEIVAPRIASV 325 (325)
Q Consensus 309 e~p~~~~~~i~~fl~~~ 325 (325)
|+|++|++.|.+||+++
T Consensus 323 E~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 323 KETDRIDAILTTALRST 339 (343)
T ss_pred cCHHHHHHHHHHHHHhc
Confidence 99999999999999764
No 21
>PRK07581 hypothetical protein; Validated
Probab=100.00 E-value=3e-32 Score=230.40 Aligned_cols=272 Identities=13% Similarity=0.166 Sum_probs=164.1
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH---HHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS---RNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~---~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
++.....++.+++|..+|+..+ ...|+||++||++++...|..++ +.|.. ++|+||++|+||||.|+.
T Consensus 17 ~~~g~~~~~~~l~y~~~G~~~~-~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~--------~~~~vi~~D~~G~G~S~~ 87 (339)
T PRK07581 17 LQSGATLPDARLAYKTYGTLNA-AKDNAILYPTWYSGTHQDNEWLIGPGRALDP--------EKYFIIIPNMFGNGLSSS 87 (339)
T ss_pred ecCCCCcCCceEEEEecCccCC-CCCCEEEEeCCCCCCcccchhhccCCCccCc--------CceEEEEecCCCCCCCCC
Confidence 4455556788999999986321 23466777788887777776543 34543 689999999999999986
Q ss_pred CCCCCCCCCHHH-----HHHHHHH----HHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 96 IEGLDPPHDIAN-----AANDLAN----LVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 96 ~~~~~~~~~~~~-----~~~~l~~----~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+......+++++ +++++.+ ++++++++ + ++||||||||++|+.+|.++|+ +|+++|++++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~-~~~~lvG~S~GG~va~~~a~~~P~--------~V~~Lvli~~~ 158 (339)
T PRK07581 88 PSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIE-RLALVVGWSMGAQQTYHWAVRYPD--------MVERAAPIAGT 158 (339)
T ss_pred CCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCC-ceEEEEEeCHHHHHHHHHHHHCHH--------HHhhheeeecC
Confidence 642112344332 4555554 67889999 8 5899999999999999999999 99999999976
Q ss_pred CCCCCCCCchhHHHHHHHHhhcCCC---CCC---c---HHHHHHHHHhhccchh--------------HHHHHhhcccCC
Q 020518 166 PGKVKTENSEGEVEKVLQTLQSLPS---SIP---S---RKWLVNHMMELGFSKS--------------LSEWIGTNLKKS 222 (325)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~---~---~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 222 (325)
+..... ...........+..... ... . ............+... ..+++.......
T Consensus 159 ~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (339)
T PRK07581 159 AKTTPH--NFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGN 236 (339)
T ss_pred CCCCHH--HHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHh
Confidence 542210 00001111111111000 000 0 0000000000000000 001110000000
Q ss_pred CcccccccChhHHHHhhhcc------c----CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCC
Q 020518 223 GERETWAFNLDGAVQMFNSY------R----EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEG 292 (325)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~------~----~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 292 (325)
....+......++... . ..+....+.+++ +|+|+|+|++|..++++..+.+.+.+++
T Consensus 237 ----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~L~~I~--~PtLvI~G~~D~~~p~~~~~~l~~~ip~------- 303 (339)
T PRK07581 237 ----FLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAALGSIT--AKTFVMPISTDLYFPPEDCEAEAALIPN------- 303 (339)
T ss_pred ----hcccCcccHHHHHHHhhhcccccCcccCCCHHHHHhcCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC-------
Confidence 0000111111111100 1 113444555565 8999999999999999888887777766
Q ss_pred ceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 293 KVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 293 ~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++++++++ +||++++|+|++++..|.+||+.
T Consensus 304 -a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~ 335 (339)
T PRK07581 304 -AELRPIESIWGHLAGFGQNPADIAFIDAALKE 335 (339)
T ss_pred -CeEEEeCCCCCccccccCcHHHHHHHHHHHHH
Confidence 89999999 99999999999999999999975
No 22
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=100.00 E-value=2.5e-31 Score=216.92 Aligned_cols=249 Identities=11% Similarity=0.114 Sum_probs=162.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.++.|.+-. .++|+|||+||++.+...|..++..|.+ .||+|+++|+||||.|..... ..+++
T Consensus 5 ~~~~~~~~~~~-----~~~p~vvliHG~~~~~~~w~~~~~~L~~--------~g~~vi~~dl~g~G~s~~~~~--~~~~~ 69 (273)
T PLN02211 5 NGEEVTDMKPN-----RQPPHFVLIHGISGGSWCWYKIRCLMEN--------SGYKVTCIDLKSAGIDQSDAD--SVTTF 69 (273)
T ss_pred ccccccccccc-----CCCCeEEEECCCCCCcCcHHHHHHHHHh--------CCCEEEEecccCCCCCCCCcc--cCCCH
Confidence 56677777621 3478999999999999999999999986 799999999999999865432 35899
Q ss_pred HHHHHHHHHHHHHhC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHH
Q 020518 106 ANAANDLANLVKAKG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQT 184 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~ 184 (325)
+++++++.+++++++ .+ +++||||||||++++.++.++|+ +|+++|++++........ ...........
T Consensus 70 ~~~~~~l~~~i~~l~~~~-~v~lvGhS~GG~v~~~~a~~~p~--------~v~~lv~~~~~~~~~g~~-~~~~~~~~~~~ 139 (273)
T PLN02211 70 DEYNKPLIDFLSSLPENE-KVILVGHSAGGLSVTQAIHRFPK--------KICLAVYVAATMLKLGFQ-TDEDMKDGVPD 139 (273)
T ss_pred HHHHHHHHHHHHhcCCCC-CEEEEEECchHHHHHHHHHhChh--------heeEEEEeccccCCCCCC-HHHHHhccccc
Confidence 999999999999985 46 99999999999999999999999 999999998754321110 00000000000
Q ss_pred hhcCCC-----------CC-C---cHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 185 LQSLPS-----------SI-P---SRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 185 ~~~~~~-----------~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
+..... .. . ........+...........+......... ...+...+...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 204 (273)
T PLN02211 140 LSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGP---------------ILALRSARFEE 204 (273)
T ss_pred hhhhccceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcC---------------ccccccccccc
Confidence 000000 00 0 000000111111111111111100000000 00111111111
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
...+. ..+|+++|.|++|..+|++..+.+.+.++. .+++.++ +||.+++++|+++++.|.++...
T Consensus 205 ~~~~~-~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~--------~~~~~l~-~gH~p~ls~P~~~~~~i~~~a~~ 269 (273)
T PLN02211 205 ETGDI-DKVPRVYIKTLHDHVVKPEQQEAMIKRWPP--------SQVYELE-SDHSPFFSTPFLLFGLLIKAAAS 269 (273)
T ss_pred ccccc-CccceEEEEeCCCCCCCHHHHHHHHHhCCc--------cEEEEEC-CCCCccccCHHHHHHHHHHHHHH
Confidence 12222 148999999999999999988888877665 7899997 79999999999999999988754
No 23
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=100.00 E-value=4.5e-32 Score=219.08 Aligned_cols=233 Identities=22% Similarity=0.346 Sum_probs=147.2
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+|+|||+||+++++..|..+++.|. +|+|+++|+||||.|..+. ..+++++++++.+++++++.+
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l~----------~~~vi~~D~~G~G~S~~~~----~~~~~~~~~~l~~~l~~~~~~- 66 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEALP----------DYPRLYIDLPGHGGSAAIS----VDGFADVSRLLSQTLQSYNIL- 66 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHcC----------CCCEEEecCCCCCCCCCcc----ccCHHHHHHHHHHHHHHcCCC-
Confidence 5789999999999999999988653 4899999999999998764 358999999999999999998
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (325)
+++++||||||.+|+.+|.++|+ .+|++++++++.+........................ .. .......+.
T Consensus 67 ~~~lvG~S~Gg~va~~~a~~~~~-------~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~ 137 (242)
T PRK11126 67 PYWLVGYSLGGRIAMYYACQGLA-------GGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQ-EP-LEQVLADWY 137 (242)
T ss_pred CeEEEEECHHHHHHHHHHHhCCc-------ccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhcc-Cc-HHHHHHHHH
Confidence 99999999999999999999976 1499999988765332111000000000000000000 00 000111100
Q ss_pred h-h---ccch-hHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccCCCCCCcEEEEeeCCCCCCChHH
Q 020518 204 E-L---GFSK-SLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDV 275 (325)
Q Consensus 204 ~-~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~ 275 (325)
. . .... ....+...... ........++.. ....+.+..+.+++ +|+++|+|++|..+.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~P~lii~G~~D~~~~--- 203 (242)
T PRK11126 138 QQPVFASLNAEQRQQLVAKRSN---------NNGAAVAAMLEATSLAKQPDLRPALQALT--FPFYYLCGERDSKFQ--- 203 (242)
T ss_pred hcchhhccCccHHHHHHHhccc---------CCHHHHHHHHHhcCcccCCcHHHHhhccC--CCeEEEEeCCcchHH---
Confidence 0 0 0000 00000000000 000111111111 11223344555555 899999999997542
Q ss_pred HHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 276 IQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
.+.+.. + ++++++++|||++++|+|+++++.|.+|++.+
T Consensus 204 --~~~~~~-~--------~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 242 (242)
T PRK11126 204 --ALAQQL-A--------LPLHVIPNAGHNAHRENPAAFAASLAQILRLI 242 (242)
T ss_pred --HHHHHh-c--------CeEEEeCCCCCchhhhChHHHHHHHHHHHhhC
Confidence 122221 2 89999999999999999999999999999753
No 24
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=100.00 E-value=4e-32 Score=220.25 Aligned_cols=243 Identities=19% Similarity=0.263 Sum_probs=164.7
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
+++|...|+. +++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+. ..++++++
T Consensus 1 ~~~~~~~g~~---~~~~~li~~hg~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~---~~~~~~~~ 65 (251)
T TIGR02427 1 RLHYRLDGAA---DGAPVLVFINSLGTDLRMWDPVLPALT---------PDFRVLRYDKRGHGLSDAPE---GPYSIEDL 65 (251)
T ss_pred CceEEeecCC---CCCCeEEEEcCcccchhhHHHHHHHhh---------cccEEEEecCCCCCCCCCCC---CCCCHHHH
Confidence 3677776653 247899999999999999999998887 78999999999999997654 57899999
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL 188 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (325)
++++.++++.++.+ +++++||||||++++.+|.++|+ +|+++|++++.......... ......+..
T Consensus 66 ~~~~~~~i~~~~~~-~v~liG~S~Gg~~a~~~a~~~p~--------~v~~li~~~~~~~~~~~~~~----~~~~~~~~~- 131 (251)
T TIGR02427 66 ADDVLALLDHLGIE-RAVFCGLSLGGLIAQGLAARRPD--------RVRALVLSNTAAKIGTPESW----NARIAAVRA- 131 (251)
T ss_pred HHHHHHHHHHhCCC-ceEEEEeCchHHHHHHHHHHCHH--------HhHHHhhccCccccCchhhH----HHHHhhhhh-
Confidence 99999999999988 99999999999999999999999 99999999876432211100 000000000
Q ss_pred CCCCCcHHHHHHHHHhh----ccc----hhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcE
Q 020518 189 PSSIPSRKWLVNHMMEL----GFS----KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 260 (325)
. ............ .+. .....+.. ... ......+......+...+....+..++ +|+
T Consensus 132 --~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~Pv 196 (251)
T TIGR02427 132 --E--GLAALADAVLERWFTPGFREAHPARLDLYRN-MLV--------RQPPDGYAGCCAAIRDADFRDRLGAIA--VPT 196 (251)
T ss_pred --c--cHHHHHHHHHHHHcccccccCChHHHHHHHH-HHH--------hcCHHHHHHHHHHHhcccHHHHhhhcC--CCe
Confidence 0 000000000000 000 00000000 000 000111111111222223333444444 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++|+|++|..++++..+.+.+..++ .++++++++||++++++|+++++.|.+|++
T Consensus 197 lii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 197 LCIAGDQDGSTPPELVREIADLVPG--------ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred EEEEeccCCcCChHHHHHHHHhCCC--------ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 9999999999999877777766654 899999999999999999999999999984
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=100.00 E-value=8.6e-32 Score=217.60 Aligned_cols=236 Identities=19% Similarity=0.243 Sum_probs=153.0
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+|+|||+||++++...|..+++.|. ++|+|+++|+||||.|... ..++++++++++.+.+ .+
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~---------~~~~vi~~d~~G~G~s~~~----~~~~~~~~~~~~~~~~----~~- 65 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELS---------AHFTLHLVDLPGHGRSRGF----GPLSLADAAEAIAAQA----PD- 65 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhc---------cCeEEEEecCCcCccCCCC----CCcCHHHHHHHHHHhC----CC-
Confidence 4799999999999999999999887 6799999999999998764 3578888888876654 25
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch-hHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE-GEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++++||||||.+++.+|.++|+ +++++|++++.+......... .........+...... ........+
T Consensus 66 ~~~lvG~S~Gg~~a~~~a~~~p~--------~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 135 (245)
T TIGR01738 66 PAIWLGWSLGGLVALHIAATHPD--------RVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSD--DYQRTIERF 135 (245)
T ss_pred CeEEEEEcHHHHHHHHHHHHCHH--------hhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhh--hHHHHHHHH
Confidence 99999999999999999999999 999999999876433211111 0000111111000000 000000000
Q ss_pred H-----hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 203 M-----ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 203 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
. ...........+........ ..........+..+...+....+.+++ +|+++|+|++|..++++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pvlii~g~~D~~~~~~~~~ 208 (245)
T TIGR01738 136 LALQTLGTPTARQDARALKQTLLARP-----TPNVQVLQAGLEILATVDLRQPLQNIS--VPFLRLYGYLDGLVPAKVVP 208 (245)
T ss_pred HHHHHhcCCccchHHHHHHHHhhccC-----CCCHHHHHHHHHHhhcccHHHHHhcCC--CCEEEEeecCCcccCHHHHH
Confidence 0 00000000000000000000 000112222222223333344455555 89999999999999998887
Q ss_pred HHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 278 RLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
.+.+.+++ +++++++++||++++|+|+++++.|.+|+
T Consensus 209 ~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 209 YLDKLAPH--------SELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred HHHHhCCC--------CeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 77777665 89999999999999999999999999996
No 26
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=3e-32 Score=224.90 Aligned_cols=263 Identities=20% Similarity=0.271 Sum_probs=167.2
Q ss_pred ceEEEEcccC-----CCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCCCCC
Q 020518 29 TLAYEEVRSS-----SDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPP 102 (325)
Q Consensus 29 ~l~y~~~~~~-----~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~~~~ 102 (325)
.+....++.. +.+.++++||++|||+++...|+.+++.|.+. .|++|+++|++|+| .|..+.+ ..
T Consensus 38 ~~~~~w~~~~~~~~~~~~~~~~pvlllHGF~~~~~~w~~~~~~L~~~-------~~~~v~aiDl~G~g~~s~~~~~--~~ 108 (326)
T KOG1454|consen 38 TIRSKWIPNLDKYGSPGDKDKPPVLLLHGFGASSFSWRRVVPLLSKA-------KGLRVLAIDLPGHGYSSPLPRG--PL 108 (326)
T ss_pred eeEEEEeccceeccCCCCCCCCcEEEeccccCCcccHhhhccccccc-------cceEEEEEecCCCCcCCCCCCC--Cc
Confidence 5555555543 22246899999999999999999999999963 35999999999999 5555554 66
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe---cCCCCCCCCCchhHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD---SVPGKVKTENSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~---~~~~~~~~~~~~~~~~ 179 (325)
|+..++++.+..++.+.+.. +++++|||+||.+|+.+|+.+|+ .|+++|+++ +.....+ .......
T Consensus 109 y~~~~~v~~i~~~~~~~~~~-~~~lvghS~Gg~va~~~Aa~~P~--------~V~~lv~~~~~~~~~~~~~--~~~~~~~ 177 (326)
T KOG1454|consen 109 YTLRELVELIRRFVKEVFVE-PVSLVGHSLGGIVALKAAAYYPE--------TVDSLVLLDLLGPPVYSTP--KGIKGLR 177 (326)
T ss_pred eehhHHHHHHHHHHHhhcCc-ceEEEEeCcHHHHHHHHHHhCcc--------cccceeeecccccccccCC--cchhHHH
Confidence 99999999999999999999 89999999999999999999999 999999555 3322211 1111111
Q ss_pred HHHH----HhhcCCCCCCc-H-HHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC--C
Q 020518 180 KVLQ----TLQSLPSSIPS-R-KWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE--M 245 (325)
Q Consensus 180 ~~~~----~~~~~~~~~~~-~-~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 245 (325)
..+. ........... . ......+.... ........... ..... ...........++..... .
T Consensus 178 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~ 253 (326)
T KOG1454|consen 178 RLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHL-LSRPV---KEHFHRDARLSLFLELLGFDE 253 (326)
T ss_pred HhhhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhhh-eeccc---ccchhhhheeeEEEeccCccc
Confidence 1111 11111110000 0 00000000000 00000000000 00000 000011111122222221 1
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.....+.++. ++|+++|+|++|.+++.+....+.+..++ ++++++++|||.+|+|+|+++++.|..|+++
T Consensus 254 ~~~~~~~~i~-~~pvlii~G~~D~~~p~~~~~~~~~~~pn--------~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~ 323 (326)
T KOG1454|consen 254 NLLSLIKKIW-KCPVLIIWGDKDQIVPLELAEELKKKLPN--------AELVEIPGAGHLPHLERPEEVAALLRSFIAR 323 (326)
T ss_pred hHHHhhcccc-CCceEEEEcCcCCccCHHHHHHHHhhCCC--------ceEEEeCCCCcccccCCHHHHHHHHHHHHHH
Confidence 1122233332 48999999999999999977777776655 9999999999999999999999999999976
No 27
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=100.00 E-value=1.8e-31 Score=226.31 Aligned_cols=275 Identities=16% Similarity=0.165 Sum_probs=171.0
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC-----------ChHHHHH---HHHhhhhccCCCCceEEEE
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-----------NWRSFSR---NLASTLSQTSASSEWRMVL 84 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-----------~~~~~~~---~l~~~~~~~~~~~~~~vi~ 84 (325)
+++....+|.+|+|..+|+... ..+++|||+||+++++. .|..++. .|.. ++|+|++
T Consensus 7 ~~~g~~~~~~~~~y~~~g~~~~-~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--------~~~~vi~ 77 (351)
T TIGR01392 7 LESGGVLSDVRVAYETYGTLNA-ERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDT--------DRYFVVC 77 (351)
T ss_pred cCCCCccCCceEEEEeccccCC-CCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCC--------CceEEEE
Confidence 3455556788999999986321 23579999999999763 4676652 3433 7899999
Q ss_pred eCCCC--CCCCCCC----CCC-----CCCCCHHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 85 VDLRN--HGRSAEI----EGL-----DPPHDIANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 85 ~D~~G--~G~S~~~----~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
+|+|| ||.|... .+. ...++++++++++.+++++++++ + ++++||||||++++.+|.++|+
T Consensus 78 ~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~l~G~S~Gg~ia~~~a~~~p~------ 150 (351)
T TIGR01392 78 SNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIE-QIAAVVGGSMGGMQALEWAIDYPE------ 150 (351)
T ss_pred ecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChH------
Confidence 99999 5555431 110 12589999999999999999999 8 9999999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcC---CC-CC-----Cc-HHHHHHHHHh--hccchhHHHHHhhccc
Q 020518 153 VALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSL---PS-SI-----PS-RKWLVNHMME--LGFSKSLSEWIGTNLK 220 (325)
Q Consensus 153 ~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~-----~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 220 (325)
+|+++|++++.+...... ..........+... .. .. +. .......+.. ......+..++.....
T Consensus 151 --~v~~lvl~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~ 226 (351)
T TIGR01392 151 --RVRAIVVLATSARHSAWC--IAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQ 226 (351)
T ss_pred --hhheEEEEccCCcCCHHH--HHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcc
Confidence 999999999875432110 00001111111110 00 00 00 0000011100 0111112222211110
Q ss_pred CCC-c-------------------ccccccChhHHHHhhhcccC-------CcccccccCCCCCCcEEEEeeCCCCCCCh
Q 020518 221 KSG-E-------------------RETWAFNLDGAVQMFNSYRE-------MSYWPLLEHPPQGMEIAIVRAEKSDRWDP 273 (325)
Q Consensus 221 ~~~-~-------------------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~P~l~i~g~~D~~~~~ 273 (325)
... . ......+...+......+.. .+.+..+.+++ +|+|+|+|++|..+++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~--~P~Lvi~G~~D~~~p~ 304 (351)
T TIGR01392 227 SGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIK--APFLVVSITSDWLFPP 304 (351)
T ss_pred cccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCC--CCEEEEEeCCccccCH
Confidence 000 0 00011111111111111111 12345566665 8999999999999999
Q ss_pred HHHHHHHHHhhhcCCCCCCceeEE-----EecCCCccccccChHHHHHHHHHHHh
Q 020518 274 DVIQRLEGLANRQGDGSEGKVSVH-----VLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+..+.+.+.+++ ++++ ++++|||++++|+|++|++.|.+||+
T Consensus 305 ~~~~~~a~~i~~--------~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 305 AESRELAKALPA--------AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred HHHHHHHHHHhh--------cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 999999988887 5544 45789999999999999999999985
No 28
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=100.00 E-value=3.2e-31 Score=226.24 Aligned_cols=279 Identities=16% Similarity=0.168 Sum_probs=170.9
Q ss_pred CCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-------------hHHHHH---HHHhhhhccCCCCceEEEE
Q 020518 21 SPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-------------WRSFSR---NLASTLSQTSASSEWRMVL 84 (325)
Q Consensus 21 ~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-------------~~~~~~---~l~~~~~~~~~~~~~~vi~ 84 (325)
.....++.+++|..+|... ...+|+|||+||++++... |..++. .|.. ++|+||+
T Consensus 26 ~g~~~~~~~~~y~~~G~~~-~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~--------~~~~vi~ 96 (379)
T PRK00175 26 SGAVLPPVELAYETYGTLN-ADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDT--------DRYFVIC 96 (379)
T ss_pred CCCCcCCceEEEEeccccC-CCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCc--------cceEEEe
Confidence 3444567789999998631 1236899999999999874 555542 2322 7899999
Q ss_pred eCCCCC-CCCCCCCCC-----------CCCCCHHHHHHHHHHHHHHhCCCCC-EEEEEeChhHHHHHHHHHHccccccCC
Q 020518 85 VDLRNH-GRSAEIEGL-----------DPPHDIANAANDLANLVKAKGWDWP-DVVIGHSMGGKVALHFAQSCARADYGQ 151 (325)
Q Consensus 85 ~D~~G~-G~S~~~~~~-----------~~~~~~~~~~~~l~~~l~~~~~~~~-~~lvGhS~Gg~~a~~~a~~~p~~~~~~ 151 (325)
+|++|+ |.|+.+... ...++++++++++.+++++++++ + ++++||||||++++.+|.++|+
T Consensus 97 ~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~-~~~~lvG~S~Gg~ia~~~a~~~p~----- 170 (379)
T PRK00175 97 SNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGIT-RLAAVVGGSMGGMQALEWAIDYPD----- 170 (379)
T ss_pred ccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCC-CceEEEEECHHHHHHHHHHHhChH-----
Confidence 999993 545432210 02689999999999999999999 8 5999999999999999999999
Q ss_pred ccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC----------CCCcHH-HHHHHHH--hhccchhHHHHHhhc
Q 020518 152 FVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS----------SIPSRK-WLVNHMM--ELGFSKSLSEWIGTN 218 (325)
Q Consensus 152 ~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~ 218 (325)
+|+++|++++.+....... .........+..... ..+... ....... ..........++...
T Consensus 171 ---~v~~lvl~~~~~~~~~~~~--~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~ 245 (379)
T PRK00175 171 ---RVRSALVIASSARLSAQNI--AFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRE 245 (379)
T ss_pred ---hhhEEEEECCCcccCHHHH--HHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCcc
Confidence 9999999998754321100 000001111111000 000000 0000000 000000111111110
Q ss_pred ccCCC-------------------cccccccChhHHHHhhhcccC--------CcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 219 LKKSG-------------------ERETWAFNLDGAVQMFNSYRE--------MSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 219 ~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
..... ......++...+......+.. .+++..+.+++ +|+|+|+|++|.++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~--~PtLvI~G~~D~~~ 323 (379)
T PRK00175 246 LQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIK--ARFLVVSFTSDWLF 323 (379)
T ss_pred ccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCC--CCEEEEEECCcccc
Confidence 00000 000011111111111111111 12455666666 89999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEec-CCCccccccChHHHHHHHHHHHhcC
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLP-NAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+++..+.+.+.+++.+. ++++++++ ++||++++|+|++|++.|.+||+.+
T Consensus 324 p~~~~~~la~~i~~a~~----~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~~ 374 (379)
T PRK00175 324 PPARSREIVDALLAAGA----DVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLERA 374 (379)
T ss_pred CHHHHHHHHHHHHhcCC----CeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHhh
Confidence 99999999998887221 14788785 8999999999999999999999753
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=100.00 E-value=7.9e-32 Score=213.59 Aligned_cols=252 Identities=17% Similarity=0.193 Sum_probs=162.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-LDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
.+++++|||||+|++...|..-++.|+ +.++|+++|++|+|+|+.|.- .+.......+++-++++....+
T Consensus 88 ~~~~plVliHGyGAg~g~f~~Nf~~La---------~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~ 158 (365)
T KOG4409|consen 88 ANKTPLVLIHGYGAGLGLFFRNFDDLA---------KIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMG 158 (365)
T ss_pred cCCCcEEEEeccchhHHHHHHhhhhhh---------hcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcC
Confidence 578999999999999999999999999 678999999999999998863 1234456689999999999999
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch---hHHHHHHHHhhcCC--------
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE---GEVEKVLQTLQSLP-------- 189 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------- 189 (325)
++ +.+|+|||+||.+|..||.+||+ +|++|||++|........... .....+...+....
T Consensus 159 L~-KmilvGHSfGGYLaa~YAlKyPe--------rV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~~~nPl~~ 229 (365)
T KOG4409|consen 159 LE-KMILVGHSFGGYLAAKYALKYPE--------RVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVATNFNPLAL 229 (365)
T ss_pred Cc-ceeEeeccchHHHHHHHHHhChH--------hhceEEEecccccccCCCcchhhcCCChHHHhhhhhhhhcCCHHHH
Confidence 99 99999999999999999999999 999999999986544321000 00011111111100
Q ss_pred --CCCCcHHHHHHHHHhhc--------cchhHHHHHhhcccCCCcccccccChhHHHHhhhc--ccCCcccccccCCCCC
Q 020518 190 --SSIPSRKWLVNHMMELG--------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS--YREMSYWPLLEHPPQG 257 (325)
Q Consensus 190 --~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 257 (325)
...+-...+...+.... ..+.+.+++.......... ...+..++.. +......+.+..++..
T Consensus 230 LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psg------E~~fk~l~~~~g~Ar~Pm~~r~~~l~~~ 303 (365)
T KOG4409|consen 230 LRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSG------ETAFKNLFEPGGWARRPMIQRLRELKKD 303 (365)
T ss_pred HHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcH------HHHHHHHHhccchhhhhHHHHHHhhccC
Confidence 00011111111111100 1111122222221111110 1111122221 2222344455556667
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
||+++|+|++|-+ .......+....... .++.++++++||.+.+++|+.|++.|.++++.
T Consensus 304 ~pv~fiyG~~dWm-D~~~g~~~~~~~~~~------~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~ 363 (365)
T KOG4409|consen 304 VPVTFIYGDRDWM-DKNAGLEVTKSLMKE------YVEIIIVPGAGHHVYLDNPEFFNQIVLEECDK 363 (365)
T ss_pred CCEEEEecCcccc-cchhHHHHHHHhhcc------cceEEEecCCCceeecCCHHHHHHHHHHHHhc
Confidence 9999999998754 333344444432221 28999999999999999999999999999875
No 30
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=100.00 E-value=5.3e-31 Score=222.09 Aligned_cols=266 Identities=15% Similarity=0.156 Sum_probs=163.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+|.+|+|+.+++....+.+++|||+||++.+.. .|..+...|.+ .||+|+++|+||||.|..... ...
T Consensus 40 ~dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~--------~Gy~V~~~D~rGhG~S~~~~~--~~~ 109 (330)
T PLN02298 40 PRGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTAIFLAQ--------MGFACFALDLEGHGRSEGLRA--YVP 109 (330)
T ss_pred CCCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHHHHHHh--------CCCEEEEecCCCCCCCCCccc--cCC
Confidence 4789999998876432234678999999986643 45667777876 799999999999999986543 356
Q ss_pred CHHHHHHHHHHHHHHhCCC-----CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKGWD-----WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~-----~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++.+++|+.++++.+... .+++|+||||||++++.++.++|+ +|+++|++++..............
T Consensus 110 ~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~~~~~~~~ 181 (330)
T PLN02298 110 NVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPE--------GFDGAVLVAPMCKISDKIRPPWPI 181 (330)
T ss_pred CHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcc--------cceeEEEecccccCCcccCCchHH
Confidence 8999999999999987531 279999999999999999999999 999999999864332111100011
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHh-hcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIG-TNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
......+........... . ...............+. ........ ..........+.... .....+..++
T Consensus 182 ~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~l~~i~-- 251 (330)
T PLN02298 182 PQILTFVARFLPTLAIVP-T-ADLLEKSVKVPAKKIIAKRNPMRYNG----KPRLGTVVELLRVTD--YLGKKLKDVS-- 251 (330)
T ss_pred HHHHHHHHHHCCCCcccc-C-CCcccccccCHHHHHHHHhCccccCC----CccHHHHHHHHHHHH--HHHHhhhhcC--
Confidence 111111111000000000 0 00000000000000000 00000000 000111111111100 1123344554
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH----HHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----LLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----~~~~i~~fl~~ 324 (325)
+|+|+|+|++|.+++++..+.+.+.++. +++++++++++||++++++|+. +.+.|.+||.+
T Consensus 252 ~PvLii~G~~D~ivp~~~~~~l~~~i~~------~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~ 316 (330)
T PLN02298 252 IPFIVLHGSADVVTDPDVSRALYEEAKS------EDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNE 316 (330)
T ss_pred CCEEEEecCCCCCCCHHHHHHHHHHhcc------CCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHH
Confidence 8999999999999999888887766643 1289999999999999998864 66677888764
No 31
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=100.00 E-value=1.6e-30 Score=215.35 Aligned_cols=259 Identities=14% Similarity=0.191 Sum_probs=157.2
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.++.++.|...+.. ..+++|||+||++++...| ..+...+.+ .||+|+++|+||||.|..+......+
T Consensus 9 ~~~~~~~~~~~~~~---~~~~~vl~~hG~~g~~~~~~~~~~~~l~~--------~g~~vi~~d~~G~G~s~~~~~~~~~~ 77 (288)
T TIGR01250 9 VDGGYHLFTKTGGE---GEKIKLLLLHGGPGMSHEYLENLRELLKE--------EGREVIMYDQLGCGYSDQPDDSDELW 77 (288)
T ss_pred CCCCeEEEEeccCC---CCCCeEEEEcCCCCccHHHHHHHHHHHHh--------cCCEEEEEcCCCCCCCCCCCcccccc
Confidence 34667788877653 2368999999987766555 444444443 48999999999999998764311248
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
+++++++++.+++++++.+ +++++||||||.+++.+|.++|+ +|+++|++++....... .........
T Consensus 78 ~~~~~~~~~~~~~~~~~~~-~~~liG~S~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~~~~~---~~~~~~~~~ 145 (288)
T TIGR01250 78 TIDYFVDELEEVREKLGLD-KFYLLGHSWGGMLAQEYALKYGQ--------HLKGLIISSMLDSAPEY---VKELNRLRK 145 (288)
T ss_pred cHHHHHHHHHHHHHHcCCC-cEEEEEeehHHHHHHHHHHhCcc--------ccceeeEecccccchHH---HHHHHHHHh
Confidence 9999999999999999988 89999999999999999999999 99999999875422110 000000000
Q ss_pred HhhcCCCCCCcHHHHHHHHHh-hc-c----chhHHHHHhhcccCCCc--ccc----cccChhHHHH--------hhhccc
Q 020518 184 TLQSLPSSIPSRKWLVNHMME-LG-F----SKSLSEWIGTNLKKSGE--RET----WAFNLDGAVQ--------MFNSYR 243 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~-~~-~----~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~--------~~~~~~ 243 (325)
. .... .......... .. . ......+.......... ... .......... ....+.
T Consensus 146 ~---~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (288)
T TIGR01250 146 E---LPPE---VRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLK 219 (288)
T ss_pred h---cChh---HHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCcccccccccc
Confidence 0 0000 0000000000 00 0 00000000000000000 000 0000000000 000011
Q ss_pred CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 244 EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 244 ~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+....+..++ +|+++++|++|. ++++..+.+.+..++ +++++++++||++++|+|+++++.|.+||+
T Consensus 220 ~~~~~~~l~~i~--~P~lii~G~~D~-~~~~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 220 DWDITDKLSEIK--VPTLLTVGEFDT-MTPEAAREMQELIAG--------SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred ccCHHHHhhccC--CCEEEEecCCCc-cCHHHHHHHHHhccC--------CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 112223344444 899999999997 466666666666654 899999999999999999999999999984
No 32
>PHA02857 monoglyceride lipase; Provisional
Probab=99.98 E-value=1e-30 Score=215.23 Aligned_cols=257 Identities=15% Similarity=0.154 Sum_probs=162.5
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
+|.+|.|+.+.+. ...++.|+++||+++++..|..+++.|.+ .||+|+++|+||||.|..... ...++
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~~~~~~~l~~--------~g~~via~D~~G~G~S~~~~~--~~~~~ 76 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRYEELAENISS--------LGILVFSHDHIGHGRSNGEKM--MIDDF 76 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchHHHHHHHHHh--------CCCEEEEccCCCCCCCCCccC--CcCCH
Confidence 7889999988663 23456777779999999999999999987 799999999999999976432 34577
Q ss_pred HHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 106 ANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 106 ~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
.++++|+...++.+ ... +++|+||||||.+|+.+|.++|+ +++++|++++....... .....+...
T Consensus 77 ~~~~~d~~~~l~~~~~~~~~~-~~~lvG~S~GG~ia~~~a~~~p~--------~i~~lil~~p~~~~~~~-~~~~~~~~~ 146 (276)
T PHA02857 77 GVYVRDVVQHVVTIKSTYPGV-PVFLLGHSMGATISILAAYKNPN--------LFTAMILMSPLVNAEAV-PRLNLLAAK 146 (276)
T ss_pred HHHHHHHHHHHHHHHhhCCCC-CEEEEEcCchHHHHHHHHHhCcc--------ccceEEEeccccccccc-cHHHHHHHH
Confidence 77788888777654 334 89999999999999999999999 99999999986432110 001111111
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
..... ........ .......... .....+....... .. .........+... ..+....+..++ +|++
T Consensus 147 ~~~~~-~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~--~~~~~~~l~~i~--~Pvl 213 (276)
T PHA02857 147 LMGIF-YPNKIVGK--LCPESVSRDM-DEVYKYQYDPLVN-HE----KIKAGFASQVLKA--TNKVRKIIPKIK--TPIL 213 (276)
T ss_pred HHHHh-CCCCccCC--CCHhhccCCH-HHHHHHhcCCCcc-CC----CccHHHHHHHHHH--HHHHHHhcccCC--CCEE
Confidence 11110 00000000 0000000000 0000111000000 00 0011111111110 011223445554 8999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
+|+|++|.+++++..+.+.+.+.. ++++++++++||+++.|++ +++.+.|.+||+.
T Consensus 214 iv~G~~D~i~~~~~~~~l~~~~~~-------~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~ 272 (276)
T PHA02857 214 ILQGTNNEISDVSGAYYFMQHANC-------NREIKIYEGAKHHLHKETDEVKKSVMKEIETWIFN 272 (276)
T ss_pred EEecCCCCcCChHHHHHHHHHccC-------CceEEEeCCCcccccCCchhHHHHHHHHHHHHHHH
Confidence 999999999999888877776532 2899999999999999976 5788999999964
No 33
>PRK10749 lysophospholipase L2; Provisional
Probab=99.98 E-value=1.2e-30 Score=219.31 Aligned_cols=273 Identities=12% Similarity=0.102 Sum_probs=167.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC---CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL---DP 101 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~---~~ 101 (325)
.+|.+++|..+++. ..+++||++||++++...|..++..|.+ .||+|+++|+||||.|..+... ..
T Consensus 38 ~~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y~~~~~~l~~--------~g~~v~~~D~~G~G~S~~~~~~~~~~~ 106 (330)
T PRK10749 38 VDDIPIRFVRFRAP---HHDRVVVICPGRIESYVKYAELAYDLFH--------LGYDVLIIDHRGQGRSGRLLDDPHRGH 106 (330)
T ss_pred CCCCEEEEEEccCC---CCCcEEEEECCccchHHHHHHHHHHHHH--------CCCeEEEEcCCCCCCCCCCCCCCCcCc
Confidence 36788999998863 2467999999999988899999988877 8999999999999999764321 02
Q ss_pred CCCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 102 PHDIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
.++++++++|+..+++++ +.. +++++||||||.+++.++.++|+ +++++|++++......... ...
T Consensus 107 ~~~~~~~~~d~~~~~~~~~~~~~~~-~~~l~GhSmGG~ia~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~-~~~ 176 (330)
T PRK10749 107 VERFNDYVDDLAAFWQQEIQPGPYR-KRYALAHSMGGAILTLFLQRHPG--------VFDAIALCAPMFGIVLPLP-SWM 176 (330)
T ss_pred cccHHHHHHHHHHHHHHHHhcCCCC-CeEEEEEcHHHHHHHHHHHhCCC--------CcceEEEECchhccCCCCC-cHH
Confidence 358999999999999886 556 99999999999999999999999 9999999988643321111 111
Q ss_pred HHHHHHHhhcCC---CCC--CcHHHHHHHHHhhc--c-chhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccc
Q 020518 178 VEKVLQTLQSLP---SSI--PSRKWLVNHMMELG--F-SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWP 249 (325)
Q Consensus 178 ~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (325)
.......+.... ... ....+......... . ......+.. .....................+... .....
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 253 (330)
T PRK10749 177 ARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLR-FYADDPELRVGGPTYHWVRESILAG--EQVLA 253 (330)
T ss_pred HHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHH-HHHhCCCcccCCCcHHHHHHHHHHH--HHHHh
Confidence 111111111000 000 00000000000000 0 000001110 0000000000000011111111000 01112
Q ss_pred cccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh---HHHHHHHHHHHhc
Q 020518 250 LLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP---KGLLEIVAPRIAS 324 (325)
Q Consensus 250 ~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p---~~~~~~i~~fl~~ 324 (325)
.+.+++ +|+|+|+|++|.+++++..+.+.+.+++.+.. .++++++++|+|||.++.|.+ +.+.+.|.+||++
T Consensus 254 ~~~~i~--~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~-~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~ 328 (330)
T PRK10749 254 GAGDIT--TPLLLLQAEEERVVDNRMHDRFCEARTAAGHP-CEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNR 328 (330)
T ss_pred hccCCC--CCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCC-CCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhh
Confidence 334444 89999999999999998888887776543210 012689999999999999876 6788899999975
No 34
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.97 E-value=1.3e-31 Score=213.91 Aligned_cols=226 Identities=24% Similarity=0.371 Sum_probs=151.7
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|..+.. ...++++++++++.+++++++.+ +++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~~~-~~~ 69 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA---------RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALGIK-KVI 69 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH---------TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTTTS-SEE
T ss_pred eEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccccccc-ccc
Confidence 7999999999999999999996 899999999999999988653 13689999999999999999998 999
Q ss_pred EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH-HHHhh
Q 020518 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN-HMMEL 205 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 205 (325)
++|||+||.+++.++.++|+ +|+++|++++......... .......+..+...... ....... .+...
T Consensus 70 lvG~S~Gg~~a~~~a~~~p~--------~v~~~vl~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 138 (228)
T PF12697_consen 70 LVGHSMGGMIALRLAARYPD--------RVKGLVLLSPPPPLPDSPS-RSFGPSFIRRLLAWRSR--SLRRLASRFFYRW 138 (228)
T ss_dssp EEEETHHHHHHHHHHHHSGG--------GEEEEEEESESSSHHHHHC-HHHHHHHHHHHHHHHHH--HHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc--------ccccceeeccccccccccc-ccccchhhhhhhhcccc--ccccccccccccc
Confidence 99999999999999999999 9999999998753221000 00001111111100000 0000000 00000
Q ss_pred ccchhHHHHHhhcccCCCcccccccChhHHHHhhhc-ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhh
Q 020518 206 GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 284 (325)
.......+.+.. ........+.. ....+....+..++ +|+++|+|++|..++.+..+.+.+..+
T Consensus 139 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~--~pvl~i~g~~D~~~~~~~~~~~~~~~~ 203 (228)
T PF12697_consen 139 FDGDEPEDLIRS-------------SRRALAEYLRSNLWQADLSEALPRIK--VPVLVIHGEDDPIVPPESAEELADKLP 203 (228)
T ss_dssp HTHHHHHHHHHH-------------HHHHHHHHHHHHHHHHHHHHHHHGSS--SEEEEEEETTSSSSHHHHHHHHHHHST
T ss_pred cccccccccccc-------------cccccccccccccccccccccccccC--CCeEEeecCCCCCCCHHHHHHHHHHCC
Confidence 001111111111 01111111111 11122334445554 899999999999999877777777666
Q ss_pred hcCCCCCCceeEEEecCCCccccccChHHHHHH
Q 020518 285 RQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEI 317 (325)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~ 317 (325)
+ +++++++++||++++|+|++|++.
T Consensus 204 ~--------~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 204 N--------AELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp T--------EEEEEETTSSSTHHHHSHHHHHHH
T ss_pred C--------CEEEEECCCCCccHHHCHHHHhcC
Confidence 5 999999999999999999999874
No 35
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.97 E-value=3.4e-29 Score=214.52 Aligned_cols=246 Identities=17% Similarity=0.170 Sum_probs=148.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC----HHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD----IANAANDLANLVK 117 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~----~~~~~~~l~~~l~ 117 (325)
.++|+|||+||++++...|...+..|. ++|+|+++|+||||.|..+.. ...+ .+.+++++.++++
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~---------~~~~vi~~D~rG~G~S~~~~~--~~~~~~~~~~~~~~~i~~~~~ 171 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALA---------SRFRVIAIDQLGWGGSSRPDF--TCKSTEETEAWFIDSFEEWRK 171 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHH---------hCCEEEEECCCCCCCCCCCCc--ccccHHHHHHHHHHHHHHHHH
Confidence 357999999999999999998888888 579999999999999987542 1112 2245778888999
Q ss_pred HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH----HHHHhhc-CCCCC
Q 020518 118 AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK----VLQTLQS-LPSSI 192 (325)
Q Consensus 118 ~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~ 192 (325)
.++++ +++++||||||.+++.+|.++|+ +|+++|++++................ +...+.. .....
T Consensus 172 ~l~~~-~~~lvGhS~GG~la~~~a~~~p~--------~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (402)
T PLN02894 172 AKNLS-NFILLGHSFGGYVAAKYALKHPE--------HVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESN 242 (402)
T ss_pred HcCCC-CeEEEEECHHHHHHHHHHHhCch--------hhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcC
Confidence 99999 99999999999999999999999 99999999876433222111100000 0000000 00000
Q ss_pred CcHHH-----------HHHHHHhhccc-------------hhHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCC
Q 020518 193 PSRKW-----------LVNHMMELGFS-------------KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREM 245 (325)
Q Consensus 193 ~~~~~-----------~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 245 (325)
..... .........+. ....+++........ ........... ....
T Consensus 243 ~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~ 315 (402)
T PLN02894 243 FTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKA-------SGELCLKYIFSFGAFARK 315 (402)
T ss_pred CCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCC-------chHHHHHHhccCchhhcc
Confidence 00000 00000000000 000000000000000 00000111111 1122
Q ss_pred cccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 246 SYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 246 ~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+....+..++ +|+++|+|++|.+.+ .....+.+.... .+++++++++||++++|+|++|++.|.+|++.
T Consensus 316 ~~~~~l~~I~--vP~liI~G~~D~i~~-~~~~~~~~~~~~-------~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~ 384 (402)
T PLN02894 316 PLLESASEWK--VPTTFIYGRHDWMNY-EGAVEARKRMKV-------PCEIIRVPQGGHFVFLDNPSGFHSAVLYACRK 384 (402)
T ss_pred hHhhhcccCC--CCEEEEEeCCCCCCc-HHHHHHHHHcCC-------CCcEEEeCCCCCeeeccCHHHHHHHHHHHHHH
Confidence 3333455554 899999999997654 444444333321 27899999999999999999999999998864
No 36
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.97 E-value=9e-30 Score=206.28 Aligned_cols=237 Identities=23% Similarity=0.443 Sum_probs=150.9
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAND-LANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~-l~~~l~~~~~~ 122 (325)
+|+|||+||++++...|..+++.|+ ++|+|+++|+||||.|..+... ..+++++++++ +..+++.++.+
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~---------~~~~v~~~d~~g~G~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 70 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG---------PHFRCLAIDLPGHGSSQSPDEI-ERYDFEEAAQDILATLLDQLGIE 70 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc---------ccCeEEEEcCCCCCCCCCCCcc-ChhhHHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999999998 7899999999999999875421 46789999999 78888888888
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH---HHHHHhhcCCCCCCcHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE---KVLQTLQSLPSSIPSRKWLV 199 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~ 199 (325)
+++++||||||.+++.+|.++|+ +|++++++++.+............. .+...+... ......
T Consensus 71 -~~~l~G~S~Gg~ia~~~a~~~~~--------~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 136 (251)
T TIGR03695 71 -PFFLVGYSMGGRIALYYALQYPE--------RVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQE-----GLEAFL 136 (251)
T ss_pred -eEEEEEeccHHHHHHHHHHhCch--------heeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhc-----CccHHH
Confidence 99999999999999999999999 9999999997654321110000000 000000000 000000
Q ss_pred HHHHhh-c------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcc---cCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 200 NHMMEL-G------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY---REMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 200 ~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
..+... . ........+...... .........+... ...+....+..++ +|+++|+|++|.
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~P~l~i~g~~D~ 206 (251)
T TIGR03695 137 DDWYQQPLFASQKNLPPEQRQALRAKRLA--------NNPEGLAKMLRATGLGKQPSLWPKLQALT--IPVLYLCGEKDE 206 (251)
T ss_pred HHHhcCceeeecccCChHHhHHHHHhccc--------ccchHHHHHHHHhhhhcccchHHHhhCCC--CceEEEeeCcch
Confidence 000000 0 000000000000000 0001111111111 1122223344444 899999999997
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.++ +..+.+.+..++ +++++++++||++++|+|+++++.|.+||+
T Consensus 207 ~~~-~~~~~~~~~~~~--------~~~~~~~~~gH~~~~e~~~~~~~~i~~~l~ 251 (251)
T TIGR03695 207 KFV-QIAKEMQKLLPN--------LTLVIIANAGHNIHLENPEAFAKILLAFLE 251 (251)
T ss_pred HHH-HHHHHHHhcCCC--------CcEEEEcCCCCCcCccChHHHHHHHHHHhC
Confidence 653 444444444443 899999999999999999999999999984
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.97 E-value=9.2e-29 Score=212.31 Aligned_cols=249 Identities=19% Similarity=0.275 Sum_probs=160.4
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..++|...++ +++++|||+||++++...|..+...|. ++|+|+++|+||||.|.... ...++
T Consensus 117 ~~~~i~~~~~g~----~~~~~vl~~HG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~g~G~s~~~~---~~~~~ 180 (371)
T PRK14875 117 GGRTVRYLRLGE----GDGTPVVLIHGFGGDLNNWLFNHAALA---------AGRPVIALDLPGHGASSKAV---GAGSL 180 (371)
T ss_pred cCcEEEEecccC----CCCCeEEEECCCCCccchHHHHHHHHh---------cCCEEEEEcCCCCCCCCCCC---CCCCH
Confidence 456788887765 247899999999999999999999888 56999999999999996554 46799
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++++++..+++.++.+ +++++||||||.+++.+|.++|+ ++.++|++++........ . .+...+
T Consensus 181 ~~~~~~~~~~~~~~~~~-~~~lvG~S~Gg~~a~~~a~~~~~--------~v~~lv~~~~~~~~~~~~--~----~~~~~~ 245 (371)
T PRK14875 181 DELAAAVLAFLDALGIE-RAHLVGHSMGGAVALRLAARAPQ--------RVASLTLIAPAGLGPEIN--G----DYIDGF 245 (371)
T ss_pred HHHHHHHHHHHHhcCCc-cEEEEeechHHHHHHHHHHhCch--------heeEEEEECcCCcCcccc--h----hHHHHh
Confidence 99999999999999988 99999999999999999999999 999999998753221110 0 011111
Q ss_pred hcCCCCCCcHHHHHHHHHhh--ccchhH-HHHHhhcccCCCcccccccChhHHH-Hhhhc-ccCCcccccccCCCCCCcE
Q 020518 186 QSLPSSIPSRKWLVNHMMEL--GFSKSL-SEWIGTNLKKSGERETWAFNLDGAV-QMFNS-YREMSYWPLLEHPPQGMEI 260 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~P~ 260 (325)
....... ............ ...... ....... .... ......... ..+.. ....+....+..++ +|+
T Consensus 246 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~--~Pv 317 (371)
T PRK14875 246 VAAESRR-ELKPVLELLFADPALVTRQMVEDLLKYK-RLDG----VDDALRALADALFAGGRQRVDLRDRLASLA--IPV 317 (371)
T ss_pred hcccchh-HHHHHHHHHhcChhhCCHHHHHHHHHHh-cccc----HHHHHHHHHHHhccCcccchhHHHHHhcCC--CCE
Confidence 0000000 000000000000 000000 0000000 0000 000000000 00000 01112222344444 899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
++|+|++|..+++...+. +... +++.+++++||++++++|+++++.|.+||++
T Consensus 318 lii~g~~D~~vp~~~~~~---l~~~--------~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 318 LVIWGEQDRIIPAAHAQG---LPDG--------VAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred EEEEECCCCccCHHHHhh---ccCC--------CeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 999999999998765433 2222 8999999999999999999999999999975
No 38
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.96 E-value=9.2e-28 Score=199.98 Aligned_cols=119 Identities=25% Similarity=0.313 Sum_probs=98.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+++|.+.|.+ ++++|||+||++++...+ .+...+.. .+|+|+++|+||||.|..+... ..++
T Consensus 12 ~~~~~l~y~~~g~~----~~~~lvllHG~~~~~~~~-~~~~~~~~--------~~~~vi~~D~~G~G~S~~~~~~-~~~~ 77 (306)
T TIGR01249 12 SDNHQLYYEQSGNP----DGKPVVFLHGGPGSGTDP-GCRRFFDP--------ETYRIVLFDQRGCGKSTPHACL-EENT 77 (306)
T ss_pred CCCcEEEEEECcCC----CCCEEEEECCCCCCCCCH-HHHhccCc--------cCCEEEEECCCCCCCCCCCCCc-ccCC
Confidence 35889999998752 367899999998876543 33344433 6899999999999999865421 3568
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+++++++..++++++++ +++++||||||.+++.++.++|+ +|+++|++++..
T Consensus 78 ~~~~~~dl~~l~~~l~~~-~~~lvG~S~GG~ia~~~a~~~p~--------~v~~lvl~~~~~ 130 (306)
T TIGR01249 78 TWDLVADIEKLREKLGIK-NWLVFGGSWGSTLALAYAQTHPE--------VVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHHHHHHHHcCCC-CEEEEEECHHHHHHHHHHHHChH--------hhhhheeecccc
Confidence 899999999999999998 99999999999999999999999 999999998764
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.96 E-value=4.5e-28 Score=236.99 Aligned_cols=261 Identities=18% Similarity=0.306 Sum_probs=164.3
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC-----CCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-----LDPPHD 104 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-----~~~~~~ 104 (325)
++|.+.|.. +++++|||+||++++...|..++..|. ++|+|+++|+||||.|..+.. ....++
T Consensus 1360 i~~~~~G~~---~~~~~vVllHG~~~s~~~w~~~~~~L~---------~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~s 1427 (1655)
T PLN02980 1360 IKVHEVGQN---AEGSVVLFLHGFLGTGEDWIPIMKAIS---------GSARCISIDLPGHGGSKIQNHAKETQTEPTLS 1427 (1655)
T ss_pred EEEEecCCC---CCCCeEEEECCCCCCHHHHHHHHHHHh---------CCCEEEEEcCCCCCCCCCccccccccccccCC
Confidence 444555532 346899999999999999999999887 679999999999999976431 013578
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH-H
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL-Q 183 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~-~ 183 (325)
++++++++.+++++++.+ +++|+||||||.+++.++.++|+ +|+++|++++.+...... ........ .
T Consensus 1428 i~~~a~~l~~ll~~l~~~-~v~LvGhSmGG~iAl~~A~~~P~--------~V~~lVlis~~p~~~~~~--~~~~~~~~~~ 1496 (1655)
T PLN02980 1428 VELVADLLYKLIEHITPG-KVTLVGYSMGARIALYMALRFSD--------KIEGAVIISGSPGLKDEV--ARKIRSAKDD 1496 (1655)
T ss_pred HHHHHHHHHHHHHHhCCC-CEEEEEECHHHHHHHHHHHhChH--------hhCEEEEECCCCccCchH--HHHHHhhhhh
Confidence 999999999999999998 99999999999999999999999 999999998765432110 00000000 0
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhc---ccCCcccccccCC
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS---YREMSYWPLLEHP 254 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 254 (325)
........ .....+...+.... .......++..... ..+.......+.. ....+.+..+..+
T Consensus 1497 ~~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~l~~~~~~~~~dl~~~L~~I 1567 (1655)
T PLN02980 1497 SRARMLID-HGLEIFLENWYSGELWKSLRNHPHFNKIVASRLL--------HKDVPSLAKLLSDLSIGRQPSLWEDLKQC 1567 (1655)
T ss_pred HHHHHHHh-hhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHh--------cCCHHHHHHHHHHhhhcccchHHHHHhhC
Confidence 00000000 00000000000000 00001111110000 0011111112211 1233445556666
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCC----CCCCceeEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGD----GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+ +|+|+|+|++|..++ +..+.+.+.+++... ...+.++++++++|||++++|+|+++++.|.+||+++
T Consensus 1568 ~--~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~ 1639 (1655)
T PLN02980 1568 D--TPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFLTRL 1639 (1655)
T ss_pred C--CCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHHHhc
Confidence 6 899999999998774 555566665554200 0001268999999999999999999999999999753
No 40
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.96 E-value=6.1e-29 Score=180.90 Aligned_cols=264 Identities=16% Similarity=0.111 Sum_probs=179.8
Q ss_pred ccccccccccccccCCccccccceEEEEcccCCCCCCCceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceEEEEe
Q 020518 7 NRHNSLNLLTRFLNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWRMVLV 85 (325)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~ 85 (325)
..|.+....+.+.++..--+|.+|+|.++|.+ ...|++++|..+ ....|.+.+..|...+ .+.|+++
T Consensus 10 ~s~~~~~~~~~~te~kv~vng~ql~y~~~G~G-----~~~iLlipGalGs~~tDf~pql~~l~k~l-------~~Tivaw 77 (277)
T KOG2984|consen 10 SSHLSPMTQSDYTESKVHVNGTQLGYCKYGHG-----PNYILLIPGALGSYKTDFPPQLLSLFKPL-------QVTIVAW 77 (277)
T ss_pred hccCCccccchhhhheeeecCceeeeeecCCC-----CceeEecccccccccccCCHHHHhcCCCC-------ceEEEEE
Confidence 34555444455555555568999999999986 457899999855 4578888887777643 3899999
Q ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 86 DLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 86 D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
|.||+|.|.+|.......-+...+++..++++.+..+ ++.++|||=||..|+..|+++++ .|.++|+.++.
T Consensus 78 DPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~-~fsvlGWSdGgiTalivAak~~e--------~v~rmiiwga~ 148 (277)
T KOG2984|consen 78 DPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLE-PFSVLGWSDGGITALIVAAKGKE--------KVNRMIIWGAA 148 (277)
T ss_pred CCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCC-CeeEeeecCCCeEEEEeeccChh--------hhhhheeeccc
Confidence 9999999998864223345667788889999999999 99999999999999999999999 99999999876
Q ss_pred CCCCCCC-CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccC
Q 020518 166 PGKVKTE-NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYRE 244 (325)
Q Consensus 166 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (325)
....... .....++..-.+...... .....+....+......|+.. ..........
T Consensus 149 ayvn~~~~ma~kgiRdv~kWs~r~R~------P~e~~Yg~e~f~~~wa~wvD~-----------------v~qf~~~~dG 205 (277)
T KOG2984|consen 149 AYVNHLGAMAFKGIRDVNKWSARGRQ------PYEDHYGPETFRTQWAAWVDV-----------------VDQFHSFCDG 205 (277)
T ss_pred ceecchhHHHHhchHHHhhhhhhhcc------hHHHhcCHHHHHHHHHHHHHH-----------------HHHHhhcCCC
Confidence 5432211 111111111111111000 001111111122222223221 1111111111
Q ss_pred CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 245 MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 245 ~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.-....+++++ ||+++++|++|++++...+..+....+. +++.++|+++|.+++..+++|+..+.+||++
T Consensus 206 ~fCr~~lp~vk--cPtli~hG~kDp~~~~~hv~fi~~~~~~--------a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 206 RFCRLVLPQVK--CPTLIMHGGKDPFCGDPHVCFIPVLKSL--------AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred chHhhhccccc--CCeeEeeCCcCCCCCCCCccchhhhccc--------ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 11233455555 9999999999999998877777777776 9999999999999999999999999999986
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.96 E-value=1.5e-27 Score=202.80 Aligned_cols=264 Identities=12% Similarity=0.104 Sum_probs=161.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..+.|..+.+.. .+.+++|||+||++++...|..+++.|.+ .||+|+++|+||||.|..... ...++
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~--------~Gy~V~~~D~rGhG~S~~~~~--~~~~~ 187 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRYLHFAKQLTS--------CGFGVYAMDWIGHGGSDGLHG--YVPSL 187 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHHHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCCCC--CCcCH
Confidence 45567777776632 23467899999999998889999999987 899999999999999987643 45688
Q ss_pred HHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+.+++|+.++++.+.. ..+++++||||||.+++.++. +|+ ...+++++|+.+|..................
T Consensus 188 ~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~-----~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~ 261 (395)
T PLN02652 188 DYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPS-----IEDKLEGIVLTSPALRVKPAHPIVGAVAPIF 261 (395)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccC-----cccccceEEEECcccccccchHHHHHHHHHH
Confidence 9999999999988742 127999999999999998764 553 0127999999987643221110000111111
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
..+.... ....... ...................... ..+ ........+.... ......+.+++ +|+|+
T Consensus 262 ~~~~p~~-~~~~~~~--~~~~~s~~~~~~~~~~~dp~~~----~g~-i~~~~~~~~~~~~--~~l~~~L~~I~--vPvLI 329 (395)
T PLN02652 262 SLVAPRF-QFKGANK--RGIPVSRDPAALLAKYSDPLVY----TGP-IRVRTGHEILRIS--SYLTRNFKSVT--VPFMV 329 (395)
T ss_pred HHhCCCC-cccCccc--ccCCcCCCHHHHHHHhcCCCcc----cCC-chHHHHHHHHHHH--HHHHhhcccCC--CCEEE
Confidence 1110000 0000000 0000000000000000000000 000 0011111111110 01123344554 89999
Q ss_pred EeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 263 VRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 263 i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
|+|++|.+++++..+.+.+.+... +.+++++|+++|.++.| .++++.+.|.+||++
T Consensus 330 i~G~~D~vvp~~~a~~l~~~~~~~------~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~ 386 (395)
T PLN02652 330 LHGTADRVTDPLASQDLYNEAASR------HKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEK 386 (395)
T ss_pred EEeCCCCCCCHHHHHHHHHhcCCC------CceEEEECCCeEEeccCCCHHHHHHHHHHHHHH
Confidence 999999999998887776665431 27899999999999887 799999999999974
No 42
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.96 E-value=8.3e-27 Score=197.35 Aligned_cols=283 Identities=13% Similarity=0.108 Sum_probs=172.8
Q ss_pred cCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCC-------------ChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 20 NSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-------------NWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 20 ~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-------------~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
+...+....+|+|+.+|..+. ...++||++|++.+++. .|..++-.=.... +..|.||++|
T Consensus 33 ~~G~~l~~~~~~Y~t~G~ln~-~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lD-----t~~yfvi~~n 106 (389)
T PRK06765 33 EGGRTIPDVQMGYETYGTLNR-AKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAID-----TNKYFVISTD 106 (389)
T ss_pred cCCCCcCCceEEEEeccccCC-CCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcC-----CCceEEEEec
Confidence 344444667899999998543 34589999999988542 2555433211100 2679999999
Q ss_pred CCCCCCCCCC-----------CC-------CCCCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHcccc
Q 020518 87 LRNHGRSAEI-----------EG-------LDPPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARA 147 (325)
Q Consensus 87 ~~G~G~S~~~-----------~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~ 147 (325)
..|-|.|+.| +. ..+.++++++++++.+++++++++ ++. ++||||||++++.+|.++|+
T Consensus 107 ~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~-~~~~vvG~SmGG~ial~~a~~~P~- 184 (389)
T PRK06765 107 TLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIA-RLHAVMGPSMGGMQAQEWAVHYPH- 184 (389)
T ss_pred ccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCC-CceEEEEECHHHHHHHHHHHHChH-
Confidence 9998764322 10 013589999999999999999999 886 99999999999999999999
Q ss_pred ccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC---------CCCcH--HHHHHHHHhhccc-hhHHHHH
Q 020518 148 DYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS---------SIPSR--KWLVNHMMELGFS-KSLSEWI 215 (325)
Q Consensus 148 ~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~~~~~~~~~~-~~~~~~~ 215 (325)
+|+++|++++.+...... ...........+...+. ..+.. ............. +.+.+-+
T Consensus 185 -------~v~~lv~ia~~~~~~~~~-~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f 256 (389)
T PRK06765 185 -------MVERMIGVIGNPQNDAWT-SVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTF 256 (389)
T ss_pred -------hhheEEEEecCCCCChhH-HHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHc
Confidence 999999999875432110 01111112222222111 00100 0000000000011 1111100
Q ss_pred hhcccCC--------------------CcccccccChhHHHHhhhcccCC-------cccccccCCCCCCcEEEEeeCCC
Q 020518 216 GTNLKKS--------------------GERETWAFNLDGAVQMFNSYREM-------SYWPLLEHPPQGMEIAIVRAEKS 268 (325)
Q Consensus 216 ~~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~P~l~i~g~~D 268 (325)
....... ......+++...+..+....... +....+..++ +|+++|.|++|
T Consensus 257 ~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~--~PtLvI~G~~D 334 (389)
T PRK06765 257 PRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIE--ANVLMIPCKQD 334 (389)
T ss_pred CcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCC--CCEEEEEeCCC
Confidence 0000000 00011122222233332322222 2344555555 89999999999
Q ss_pred CCCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHHhc
Q 020518 269 DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..++++..+.+.+.++..+. +++++++++ +||++++|+|+++++.|.+||++
T Consensus 335 ~l~p~~~~~~la~~lp~~~~----~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 335 LLQPPRYNYKMVDILQKQGK----YAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred CCCCHHHHHHHHHHhhhcCC----CeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 99999888888888764221 289999986 99999999999999999999964
No 43
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.96 E-value=6.5e-27 Score=182.36 Aligned_cols=266 Identities=16% Similarity=0.178 Sum_probs=180.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
..|..+.+..+-+......+..|+++||++... ..|..++..|+. .||.|+++|++|||.|+.... ...
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~--------~g~~v~a~D~~GhG~SdGl~~--yi~ 104 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQSTAKRLAK--------SGFAVYAIDYEGHGRSDGLHA--YVP 104 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHHHHHHHh--------CCCeEEEeeccCCCcCCCCcc--cCC
Confidence 357888888887754335677899999998876 677789999998 999999999999999998765 677
Q ss_pred CHHHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 104 DIANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
+++..++|+..+++... .+.+..++||||||+|++.++.+.|+ ...++|+++|..............
T Consensus 105 ~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~--------~w~G~ilvaPmc~i~~~~kp~p~v 176 (313)
T KOG1455|consen 105 SFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPN--------FWDGAILVAPMCKISEDTKPHPPV 176 (313)
T ss_pred cHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCc--------ccccceeeecccccCCccCCCcHH
Confidence 99999999999998642 22379999999999999999999999 999999999876555444344344
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchh-HHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKS-LSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
...+..+..+.+.+...+ ........+.+. .......+.... .-.-.......+++. ..++...+..+.
T Consensus 177 ~~~l~~l~~liP~wk~vp--~~d~~~~~~kdp~~r~~~~~npl~y----~g~pRl~T~~ElLr~--~~~le~~l~~vt-- 246 (313)
T KOG1455|consen 177 ISILTLLSKLIPTWKIVP--TKDIIDVAFKDPEKRKILRSDPLCY----TGKPRLKTAYELLRV--TADLEKNLNEVT-- 246 (313)
T ss_pred HHHHHHHHHhCCceeecC--CccccccccCCHHHHHHhhcCCcee----cCCccHHHHHHHHHH--HHHHHHhccccc--
Confidence 444433333322221000 000000011111 111111111111 111112223333332 123334555555
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc----cChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV----DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~----e~p~~~~~~i~~fl~~ 324 (325)
+|.++++|+.|.++.|..++.+.+.+... +.++..+||+=|.++. |+-+.|...|.+||+.
T Consensus 247 vPflilHG~dD~VTDp~~Sk~Lye~A~S~------DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 247 VPFLILHGTDDKVTDPKVSKELYEKASSS------DKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred ccEEEEecCCCcccCcHHHHHHHHhccCC------CCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHh
Confidence 89999999999999999999998888763 3799999999999886 3456788888899864
No 44
>PRK05855 short chain dehydrogenase; Validated
Probab=99.96 E-value=5.8e-28 Score=219.47 Aligned_cols=264 Identities=17% Similarity=0.180 Sum_probs=155.4
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.+|.+|+|..+|+. ++|+|||+||++++...|..+++.|. ++|+|+++|+||||.|..+... ..++
T Consensus 10 ~~g~~l~~~~~g~~----~~~~ivllHG~~~~~~~w~~~~~~L~---------~~~~Vi~~D~~G~G~S~~~~~~-~~~~ 75 (582)
T PRK05855 10 SDGVRLAVYEWGDP----DRPTVVLVHGYPDNHEVWDGVAPLLA---------DRFRVVAYDVRGAGRSSAPKRT-AAYT 75 (582)
T ss_pred eCCEEEEEEEcCCC----CCCeEEEEcCCCchHHHHHHHHHHhh---------cceEEEEecCCCCCCCCCCCcc-cccC
Confidence 36789999998763 47899999999999999999999985 7899999999999999865421 4689
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc--cccccCCccCCcceEEEEecCCCCCCCCC--------c
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC--ARADYGQFVALPKQLWVLDSVPGKVKTEN--------S 174 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~--p~~~~~~~~~~v~~lvli~~~~~~~~~~~--------~ 174 (325)
++++++|+..++++++.+++++|+||||||.+++.++.+. ++ ++..++.++++........ .
T Consensus 76 ~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~--------~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (582)
T PRK05855 76 LARLADDFAAVIDAVSPDRPVHLLAHDWGSIQGWEAVTRPRAAG--------RIASFTSVSGPSLDHVGFWLRSGLRRPT 147 (582)
T ss_pred HHHHHHHHHHHHHHhCCCCcEEEEecChHHHHHHHHHhCccchh--------hhhhheeccCCchHHHHHHHhhcccccc
Confidence 9999999999999998873599999999999999888762 23 4444444443211000000 0
Q ss_pred hhHHHHHHHHhhcC----CCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCccccccc---C-hhHHHHhhhcccCCc
Q 020518 175 EGEVEKVLQTLQSL----PSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAF---N-LDGAVQMFNSYREMS 246 (325)
Q Consensus 175 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~ 246 (325)
..........+... ....+... .............+................. . ...............
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (582)
T PRK05855 148 PRRLARALGQLLRSWYIYLFHLPVLP---ELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSL 224 (582)
T ss_pred hhhhhHHHHHHhhhHHHHHHhCCCCc---HHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhh
Confidence 00000000000000 00000000 0000000000011101000000000000000 0 000000000000111
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
....+..+ ++|+++|+|++|.++++...+.+.+..+. .++++++ +||++++|+|+++++.|.+|+..
T Consensus 225 ~~~~~~~~--~~P~lii~G~~D~~v~~~~~~~~~~~~~~--------~~~~~~~-~gH~~~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 225 SRPRERYT--DVPVQLIVPTGDPYVRPALYDDLSRWVPR--------LWRREIK-AGHWLPMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred ccCccCCc--cCceEEEEeCCCcccCHHHhccccccCCc--------ceEEEcc-CCCcchhhChhHHHHHHHHHHHh
Confidence 11112223 48999999999999999877777665554 7888887 59999999999999999999975
No 45
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.96 E-value=7e-27 Score=191.31 Aligned_cols=265 Identities=17% Similarity=0.195 Sum_probs=166.0
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC-CCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA-EIEGLDPPH 103 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~-~~~~~~~~~ 103 (325)
.++..+.|..+....+ ...+||++||++.+..-|..++..|.. .||.|+++|+||||.|. ...+ ...
T Consensus 17 ~d~~~~~~~~~~~~~~--~~g~Vvl~HG~~Eh~~ry~~la~~l~~--------~G~~V~~~D~RGhG~S~r~~rg--~~~ 84 (298)
T COG2267 17 ADGTRLRYRTWAAPEP--PKGVVVLVHGLGEHSGRYEELADDLAA--------RGFDVYALDLRGHGRSPRGQRG--HVD 84 (298)
T ss_pred CCCceEEEEeecCCCC--CCcEEEEecCchHHHHHHHHHHHHHHh--------CCCEEEEecCCCCCCCCCCCcC--Cch
Confidence 4688999998876422 237899999999999999999999998 99999999999999998 4444 556
Q ss_pred CHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 104 DIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+++++.+|+..+++... .+.+++++||||||.|++.++.+++. +|+++||.+|...... .........
T Consensus 85 ~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~--------~i~~~vLssP~~~l~~-~~~~~~~~~ 155 (298)
T COG2267 85 SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPP--------RIDGLVLSSPALGLGG-AILRLILAR 155 (298)
T ss_pred hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCc--------cccEEEEECccccCCh-hHHHHHHHH
Confidence 69999999999998875 33499999999999999999999998 9999999998765442 000000011
Q ss_pred H-HHHhhcCCCCCCcHHHHHHHHHhh--ccchhHHHHHhhcccCCCcccccccC-hhHHHHhhhcccCCcccccccCCCC
Q 020518 181 V-LQTLQSLPSSIPSRKWLVNHMMEL--GFSKSLSEWIGTNLKKSGERETWAFN-LDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 181 ~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
. ...+..+.....-........... .......+....... ...... ..+......... ..... .....
T Consensus 156 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~-----~~~~~~~~~w~~~~~~a~~-~~~~~--~~~~~ 227 (298)
T COG2267 156 LALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPL-----IGVGGPVSRWVDLALLAGR-VPALR--DAPAI 227 (298)
T ss_pred HhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCc-----cccCCccHHHHHHHHHhhc-ccchh--ccccc
Confidence 1 111111111111000000000000 000011111111110 011111 111111111111 11111 12334
Q ss_pred CCcEEEEeeCCCCCCC-hHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC-h--HHHHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWD-PDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-P--KGLLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-p--~~~~~~i~~fl~~ 324 (325)
.+|+|+++|++|.+++ .+....+.+.... +++++++++|+.|.++.|. . +++.+.+.+|+..
T Consensus 228 ~~PvLll~g~~D~vv~~~~~~~~~~~~~~~------~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~ 293 (298)
T COG2267 228 ALPVLLLQGGDDRVVDNVEGLARFFERAGS------PDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAE 293 (298)
T ss_pred cCCEEEEecCCCccccCcHHHHHHHHhcCC------CCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHh
Confidence 5899999999999998 5555444444433 3479999999999999884 4 7888999999864
No 46
>PLN02511 hydrolase
Probab=99.95 E-value=2.3e-27 Score=202.54 Aligned_cols=256 Identities=16% Similarity=0.187 Sum_probs=149.1
Q ss_pred cccccceEEEEcccC--CCCCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSS--SDRPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~--~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.||..+.+...... ....++|+||++||+++++.. | ..++..+.+ +||+|+++|+||||.|....
T Consensus 78 ~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~~~~--------~g~~vv~~d~rG~G~s~~~~-- 147 (388)
T PLN02511 78 TPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLRARS--------KGWRVVVFNSRGCADSPVTT-- 147 (388)
T ss_pred CCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHH--------CCCEEEEEecCCCCCCCCCC--
Confidence 357777776554321 122457899999999877654 5 456665555 89999999999999997643
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC---CCCEEEEEeChhHHHHHHHHHHccccccCCccCC--cceEEEEecCCCCCCCC-C
Q 020518 100 DPPHDIANAANDLANLVKAKGW---DWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL--PKQLWVLDSVPGKVKTE-N 173 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~---~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~--v~~lvli~~~~~~~~~~-~ 173 (325)
.......+++|+.++++++.. +.+++++||||||.+++.++.++|+ + |.++++++++....... .
T Consensus 148 -~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~--------~~~v~~~v~is~p~~l~~~~~~ 218 (388)
T PLN02511 148 -PQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGE--------NCPLSGAVSLCNPFDLVIADED 218 (388)
T ss_pred -cCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCC--------CCCceEEEEECCCcCHHHHHHH
Confidence 223335667777777777654 1289999999999999999999998 5 88888887543220000 0
Q ss_pred chhHHHHHH-HHhhcCCCCCCcHHHHHH---HHHhh---ccc-------hhHHHHHhhcccCCCcccccccChhHHHHhh
Q 020518 174 SEGEVEKVL-QTLQSLPSSIPSRKWLVN---HMMEL---GFS-------KSLSEWIGTNLKKSGERETWAFNLDGAVQMF 239 (325)
Q Consensus 174 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~---~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (325)
....+.... ..+... ...... ..... .+. ....++.. .... .........++
T Consensus 219 ~~~~~~~~y~~~~~~~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~-~~t~------~~~gf~~~~~y- 284 (388)
T PLN02511 219 FHKGFNNVYDKALAKA------LRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDD-GLTR------VSFGFKSVDAY- 284 (388)
T ss_pred HhccHHHHHHHHHHHH------HHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHH-hhhh------hcCCCCCHHHH-
Confidence 000000000 000000 000000 00000 000 00000000 0000 00000011111
Q ss_pred hcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHH-----
Q 020518 240 NSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKG----- 313 (325)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~----- 313 (325)
|...+....+..++ +|+++|+|++|+++++... ....+..++ +++++++++||+.++|+|+.
T Consensus 285 --y~~~s~~~~L~~I~--vPtLiI~g~dDpi~p~~~~~~~~~~~~p~--------~~l~~~~~gGH~~~~E~p~~~~~~~ 352 (388)
T PLN02511 285 --YSNSSSSDSIKHVR--VPLLCIQAANDPIAPARGIPREDIKANPN--------CLLIVTPSGGHLGWVAGPEAPFGAP 352 (388)
T ss_pred --HHHcCchhhhccCC--CCeEEEEcCCCCcCCcccCcHhHHhcCCC--------EEEEECCCcceeccccCCCCCCCCc
Confidence 12223344556665 8999999999999987644 223333333 99999999999999999976
Q ss_pred -HHHHHHHHHhc
Q 020518 314 -LLEIVAPRIAS 324 (325)
Q Consensus 314 -~~~~i~~fl~~ 324 (325)
+.+.|.+||+.
T Consensus 353 w~~~~i~~Fl~~ 364 (388)
T PLN02511 353 WTDPVVMEFLEA 364 (388)
T ss_pred cHHHHHHHHHHH
Confidence 58999999875
No 47
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.95 E-value=8.5e-26 Score=189.20 Aligned_cols=272 Identities=14% Similarity=0.133 Sum_probs=162.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCC-Ch-------------------------HHHHHHHHhhhhccCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR-NW-------------------------RSFSRNLASTLSQTSASS 78 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~-~~-------------------------~~~~~~l~~~~~~~~~~~ 78 (325)
.+|.+|+++.+.+. +.+.+|+++||++.+.. .| ..+++.|.+ .
T Consensus 5 ~~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~--------~ 73 (332)
T TIGR01607 5 KDGLLLKTYSWIVK---NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNK--------N 73 (332)
T ss_pred CCCCeEEEeeeecc---CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHH--------C
Confidence 46888998887653 34779999999999885 11 457888887 8
Q ss_pred ceEEEEeCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhC----------------------C-CCCEEEEEeChhH
Q 020518 79 EWRMVLVDLRNHGRSAEIEG-LDPPHDIANAANDLANLVKAKG----------------------W-DWPDVVIGHSMGG 134 (325)
Q Consensus 79 ~~~vi~~D~~G~G~S~~~~~-~~~~~~~~~~~~~l~~~l~~~~----------------------~-~~~~~lvGhS~Gg 134 (325)
||+|+++|+||||.|..... .....+++++++|+..+++... . +.|++++||||||
T Consensus 74 G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg 153 (332)
T TIGR01607 74 GYSVYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGG 153 (332)
T ss_pred CCcEEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCcc
Confidence 99999999999999986421 0022589999999999998642 1 3389999999999
Q ss_pred HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-----CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccch
Q 020518 135 KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-----NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSK 209 (325)
Q Consensus 135 ~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (325)
.+++.++.++++...-.....++++|++++........ .........+..+....+...... . .......
T Consensus 154 ~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~----~-~~~~~~~ 228 (332)
T TIGR01607 154 NIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISK----K-IRYEKSP 228 (332)
T ss_pred HHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccC----c-cccccCh
Confidence 99999998765310000001588999888763221100 001111112221111111100000 0 0000000
Q ss_pred hHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCC
Q 020518 210 SLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDG 289 (325)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~ 289 (325)
...+..... ...............++..... ....+..++.++|+++|+|++|.+++++..+.+.+.+..
T Consensus 229 ~~~~~~~~D----p~~~~~~~s~~~~~~l~~~~~~--~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~---- 298 (332)
T TIGR01607 229 YVNDIIKFD----KFRYDGGITFNLASELIKATDT--LDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSI---- 298 (332)
T ss_pred hhhhHHhcC----ccccCCcccHHHHHHHHHHHHH--HHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccC----
Confidence 111111110 0000011122333333332211 112334444458999999999999999877766554432
Q ss_pred CCCceeEEEecCCCccccccC-hHHHHHHHHHHHhc
Q 020518 290 SEGKVSVHVLPNAGHWVHVDN-PKGLLEIVAPRIAS 324 (325)
Q Consensus 290 ~~~~~~~~~~~~~gH~~~~e~-p~~~~~~i~~fl~~ 324 (325)
++++++++++++|.++.|. ++++.+.|.+||..
T Consensus 299 --~~~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 299 --SNKELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred --CCcEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 1379999999999999985 79999999999863
No 48
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.94 E-value=7.5e-26 Score=173.24 Aligned_cols=263 Identities=21% Similarity=0.256 Sum_probs=176.2
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
++..+.+..|-..++...+|.++++||++.+...|..++..|... -..+|+++|+||||.+...++ ...+.
T Consensus 56 ~~~~~t~n~Y~t~~~~t~gpil~l~HG~G~S~LSfA~~a~el~s~-------~~~r~~a~DlRgHGeTk~~~e--~dlS~ 126 (343)
T KOG2564|consen 56 DGSDLTFNVYLTLPSATEGPILLLLHGGGSSALSFAIFASELKSK-------IRCRCLALDLRGHGETKVENE--DDLSL 126 (343)
T ss_pred CCCcceEEEEEecCCCCCccEEEEeecCcccchhHHHHHHHHHhh-------cceeEEEeeccccCccccCCh--hhcCH
Confidence 344445555444443467999999999999999999999999875 467889999999999988776 67999
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
+.++.|+.++++++- +. +++||||||||.+|...|..--= ..+.++++|+..-+ .....+..+.
T Consensus 127 eT~~KD~~~~i~~~fge~~~-~iilVGHSmGGaIav~~a~~k~l-------psl~Gl~viDVVEg-----tAmeAL~~m~ 193 (343)
T KOG2564|consen 127 ETMSKDFGAVIKELFGELPP-QIILVGHSMGGAIAVHTAASKTL-------PSLAGLVVIDVVEG-----TAMEALNSMQ 193 (343)
T ss_pred HHHHHHHHHHHHHHhccCCC-ceEEEeccccchhhhhhhhhhhc-------hhhhceEEEEEech-----HHHHHHHHHH
Confidence 999999999999884 45 89999999999999888765311 14889999997632 2223334445
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchh---HHHHHhhcccCCC--cccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKS---LSEWIGTNLKKSG--ERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
..+...+..+.+.+..+++-......+. ..--+...+.... ....|+.+......++..+.. .+....-. .+
T Consensus 194 ~fL~~rP~~F~Si~~Ai~W~v~sg~~Rn~~SArVsmP~~~~~~~eGh~yvwrtdL~kte~YW~gWF~-gLS~~Fl~--~p 270 (343)
T KOG2564|consen 194 HFLRNRPKSFKSIEDAIEWHVRSGQLRNRDSARVSMPSQLKQCEEGHCYVWRTDLEKTEQYWKGWFK-GLSDKFLG--LP 270 (343)
T ss_pred HHHhcCCccccchhhHHHHHhccccccccccceEecchheeeccCCCcEEEEeeccccchhHHHHHh-hhhhHhhC--CC
Confidence 5566667777766666665544322111 1111111222222 245666666655555554332 11122222 23
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|-++|.++.|..-..-. +.++. .+.++.+++.+||+++.+.|..++..+..|+.+
T Consensus 271 ~~klLilAg~d~LDkdLt-------iGQMQ----Gk~Q~~vL~~~GH~v~ED~P~kva~~~~~f~~R 326 (343)
T KOG2564|consen 271 VPKLLILAGVDRLDKDLT-------IGQMQ----GKFQLQVLPLCGHFVHEDSPHKVAECLCVFWIR 326 (343)
T ss_pred ccceeEEecccccCccee-------eeeec----cceeeeeecccCceeccCCcchHHHHHHHHHhh
Confidence 788888888875432211 11111 238999999999999999999999999999853
No 49
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.94 E-value=2.3e-25 Score=165.32 Aligned_cols=224 Identities=17% Similarity=0.190 Sum_probs=151.8
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---HHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL---VKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~---l~~~~ 120 (325)
+..|+|+|||.++....+.+.+.|.+ +||.|.+|.+||||.....- -..+.++|-+++.+. |...+
T Consensus 15 ~~AVLllHGFTGt~~Dvr~Lgr~L~e--------~GyTv~aP~ypGHG~~~e~f---l~t~~~DW~~~v~d~Y~~L~~~g 83 (243)
T COG1647 15 NRAVLLLHGFTGTPRDVRMLGRYLNE--------NGYTVYAPRYPGHGTLPEDF---LKTTPRDWWEDVEDGYRDLKEAG 83 (243)
T ss_pred CEEEEEEeccCCCcHHHHHHHHHHHH--------CCceEecCCCCCCCCCHHHH---hcCCHHHHHHHHHHHHHHHHHcC
Confidence 47899999999999999999999999 99999999999999876432 345566665555444 45557
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCC-CCCcHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPS-SIPSRKWLV 199 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 199 (325)
.+ .+.++|-||||.+++.+|..+| ++++|.++++...... ...+...+........ ...+...+.
T Consensus 84 y~-eI~v~GlSmGGv~alkla~~~p----------~K~iv~m~a~~~~k~~---~~iie~~l~y~~~~kk~e~k~~e~~~ 149 (243)
T COG1647 84 YD-EIAVVGLSMGGVFALKLAYHYP----------PKKIVPMCAPVNVKSW---RIIIEGLLEYFRNAKKYEGKDQEQID 149 (243)
T ss_pred CC-eEEEEeecchhHHHHHHHhhCC----------ccceeeecCCcccccc---hhhhHHHHHHHHHhhhccCCCHHHHH
Confidence 78 9999999999999999999986 6999999876432222 2222333332222111 111111111
Q ss_pred HHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHH
Q 020518 200 NHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
+.+... .. .+......+..+.. +....++.|. .|++++.|++|++++.+.+..+
T Consensus 150 ~e~~~~-------------~~------~~~~~~~~~~~~i~-----~~~~~~~~I~--~pt~vvq~~~D~mv~~~sA~~I 203 (243)
T COG1647 150 KEMKSY-------------KD------TPMTTTAQLKKLIK-----DARRSLDKIY--SPTLVVQGRQDEMVPAESANFI 203 (243)
T ss_pred HHHHHh-------------hc------chHHHHHHHHHHHH-----HHHhhhhhcc--cchhheecccCCCCCHHHHHHH
Confidence 111100 00 00000111111211 1223445555 7999999999999999998888
Q ss_pred HHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 280 EGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
....... +.++.+++++||.+..+ ..|++.+.|..||+.
T Consensus 204 y~~v~s~------~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 204 YDHVESD------DKELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHhccCC------cceeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 7777653 37999999999998875 679999999999974
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.94 E-value=2.1e-25 Score=186.91 Aligned_cols=273 Identities=15% Similarity=0.138 Sum_probs=145.2
Q ss_pred CCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC
Q 020518 21 SPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG 98 (325)
Q Consensus 21 ~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~ 98 (325)
..++.+|..+.+.....+....++|+||++||++++... +..++..|.+ .||+|+++|+||||.+.....
T Consensus 35 ~~~~~dg~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~~l~~--------~G~~v~~~d~rG~g~~~~~~~ 106 (324)
T PRK10985 35 RLELPDGDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLEAAQK--------RGWLGVVMHFRGCSGEPNRLH 106 (324)
T ss_pred EEECCCCCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHHHHHH--------CCCEEEEEeCCCCCCCccCCc
Confidence 345567777665543222223457899999999887554 3457778887 899999999999997754321
Q ss_pred -CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC-chh
Q 020518 99 -LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN-SEG 176 (325)
Q Consensus 99 -~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~-~~~ 176 (325)
.......++....+..+.++++.. +++++||||||.+++.++.++++. ..+.++|+++++........ ...
T Consensus 107 ~~~~~~~~~D~~~~i~~l~~~~~~~-~~~~vG~S~GG~i~~~~~~~~~~~------~~~~~~v~i~~p~~~~~~~~~~~~ 179 (324)
T PRK10985 107 RIYHSGETEDARFFLRWLQREFGHV-PTAAVGYSLGGNMLACLLAKEGDD------LPLDAAVIVSAPLMLEACSYRMEQ 179 (324)
T ss_pred ceECCCchHHHHHHHHHHHHhCCCC-CEEEEEecchHHHHHHHHHhhCCC------CCccEEEEEcCCCCHHHHHHHHhh
Confidence 001112333333333344445666 899999999999999999887650 13889999987643211000 000
Q ss_pred HHHHHHHH-hhcCCCCCCcHHHHHHHHHh--hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 177 EVEKVLQT-LQSLPSSIPSRKWLVNHMME--LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 177 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
........ +... ........... ........ .+...................+......+...+....+..
T Consensus 180 ~~~~~~~~~l~~~-----l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~~~~~l~~ 253 (324)
T PRK10985 180 GFSRVYQRYLLNL-----LKANAARKLAAYPGTLPINLA-QLKSVRRLREFDDLITARIHGFADAIDYYRQCSALPLLNQ 253 (324)
T ss_pred hHHHHHHHHHHHH-----HHHHHHHHHHhccccccCCHH-HHhcCCcHHHHhhhheeccCCCCCHHHHHHHCChHHHHhC
Confidence 00000000 0000 00000000000 00000000 0000000000000000011111112222222333445555
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-----HHHHHHHHHHHhc
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-----KGLLEIVAPRIAS 324 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-----~~~~~~i~~fl~~ 324 (325)
++ +|+++|+|++|.+++++..+.+.+..++ +++++++++||+.++|.. ...-+.+.+|++.
T Consensus 254 i~--~P~lii~g~~D~~~~~~~~~~~~~~~~~--------~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 254 IR--KPTLIIHAKDDPFMTHEVIPKPESLPPN--------VEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred CC--CCEEEEecCCCCCCChhhChHHHHhCCC--------eEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 55 8999999999999998777666554443 899999999999999742 3455666666643
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=1.5e-22 Score=173.59 Aligned_cols=230 Identities=15% Similarity=0.078 Sum_probs=144.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
++..|....+.+. .....|+||++||+.+.. ..|..++..|.+ .||.|+++|+||+|.|.... ...+
T Consensus 177 ~g~~l~g~l~~P~-~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~--------~Gy~vl~~D~pG~G~s~~~~---~~~d 244 (414)
T PRK05077 177 GGGPITGFLHLPK-GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAP--------RGIAMLTIDMPSVGFSSKWK---LTQD 244 (414)
T ss_pred CCcEEEEEEEECC-CCCCccEEEEeCCcccchhhhHHHHHHHHHh--------CCCEEEEECCCCCCCCCCCC---cccc
Confidence 4546665554443 223466777777776653 568888888887 89999999999999997632 2234
Q ss_pred HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
......++.+++... +.+ ++.++||||||.+++.+|..+|+ +|+++|+++++....... ...
T Consensus 245 ~~~~~~avld~l~~~~~vd~~-ri~l~G~S~GG~~Al~~A~~~p~--------ri~a~V~~~~~~~~~~~~------~~~ 309 (414)
T PRK05077 245 SSLLHQAVLNALPNVPWVDHT-RVAAFGFRFGANVAVRLAYLEPP--------RLKAVACLGPVVHTLLTD------PKR 309 (414)
T ss_pred HHHHHHHHHHHHHhCcccCcc-cEEEEEEChHHHHHHHHHHhCCc--------CceEEEEECCccchhhcc------hhh
Confidence 555556666666655 556 89999999999999999999998 999999998764211000 000
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc-cCCCCCCcE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL-EHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~ 260 (325)
...+ +.. ....+. ..+. ... .+.......+..+.. .....+ .++ ++|+
T Consensus 310 ~~~~-------p~~--~~~~la---------~~lg----~~~------~~~~~l~~~l~~~sl-~~~~~l~~~i--~~Pv 358 (414)
T PRK05077 310 QQQV-------PEM--YLDVLA---------SRLG----MHD------ASDEALRVELNRYSL-KVQGLLGRRC--PTPM 358 (414)
T ss_pred hhhc-------hHH--HHHHHH---------HHhC----CCC------CChHHHHHHhhhccc-hhhhhhccCC--CCcE
Confidence 0000 000 000000 0000 000 000111111111110 000011 233 4899
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|++|.++|++..+.+.+..++ .+++++|++ ++.+.++++++.|.+||+.
T Consensus 359 LiI~G~~D~ivP~~~a~~l~~~~~~--------~~l~~i~~~---~~~e~~~~~~~~i~~wL~~ 411 (414)
T PRK05077 359 LSGYWKNDPFSPEEDSRLIASSSAD--------GKLLEIPFK---PVYRNFDKALQEISDWLED 411 (414)
T ss_pred EEEecCCCCCCCHHHHHHHHHhCCC--------CeEEEccCC---CccCCHHHHHHHHHHHHHH
Confidence 9999999999999988877766654 899999986 5668999999999999974
No 52
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.91 E-value=2.5e-22 Score=164.19 Aligned_cols=231 Identities=14% Similarity=0.069 Sum_probs=133.1
Q ss_pred CCceEEEecCCCCC----CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGS----GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~----~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
++++||++||++.. ...|..+++.|++ .||+|+++|+||||.|... ..+++++.+|+.++++.
T Consensus 25 ~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~--------~G~~v~~~Dl~G~G~S~~~-----~~~~~~~~~d~~~~~~~ 91 (274)
T TIGR03100 25 HTTGVLIVVGGPQYRVGSHRQFVLLARRLAE--------AGFPVLRFDYRGMGDSEGE-----NLGFEGIDADIAAAIDA 91 (274)
T ss_pred CCCeEEEEeCCccccCCchhHHHHHHHHHHH--------CCCEEEEeCCCCCCCCCCC-----CCCHHHHHHHHHHHHHH
Confidence 35678888887642 2335566777876 8999999999999998753 35677888888888877
Q ss_pred h-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCC
Q 020518 119 K-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIP 193 (325)
Q Consensus 119 ~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (325)
+ +.+ +++++||||||.+++.+|.. ++ +|+++|++++........ ............ ...
T Consensus 92 l~~~~~g~~-~i~l~G~S~Gg~~a~~~a~~-~~--------~v~~lil~~p~~~~~~~~-~~~~~~~~~~~~--~~~--- 155 (274)
T TIGR03100 92 FREAAPHLR-RIVAWGLCDAASAALLYAPA-DL--------RVAGLVLLNPWVRTEAAQ-AASRIRHYYLGQ--LLS--- 155 (274)
T ss_pred HHhhCCCCC-cEEEEEECHHHHHHHHHhhh-CC--------CccEEEEECCccCCcccc-hHHHHHHHHHHH--HhC---
Confidence 6 456 89999999999999999875 45 799999999763321111 111111110000 000
Q ss_pred cHHHHHHHHHhhc--cchhHHHHHhhcccC-CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCC
Q 020518 194 SRKWLVNHMMELG--FSKSLSEWIGTNLKK-SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDR 270 (325)
Q Consensus 194 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~ 270 (325)
. .....+.... +.............. ....... ... ...+....+..+. +|+++++|++|..
T Consensus 156 -~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--------~~~~~~~~l~~~~--~P~ll~~g~~D~~ 220 (274)
T TIGR03100 156 -A-DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVA---HGG--------LAERMKAGLERFQ--GPVLFILSGNDLT 220 (274)
T ss_pred -h-HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcc---cch--------HHHHHHHHHHhcC--CcEEEEEcCcchh
Confidence 0 0001000000 000000000000000 0000000 000 0111223344443 8999999999987
Q ss_pred CChHHH------HHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 271 WDPDVI------QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 271 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
.+ ... ....+.+.. ++++++.+++++|++..| .++++.+.|.+||++
T Consensus 221 ~~-~~~~~~~~~~~~~~~l~~------~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 221 AQ-EFADSVLGEPAWRGALED------PGIERVEIDGADHTFSDRVWREWVAARTTEWLRR 274 (274)
T ss_pred HH-HHHHHhccChhhHHHhhc------CCeEEEecCCCCcccccHHHHHHHHHHHHHHHhC
Confidence 53 222 233333321 138999999999999555 569999999999964
No 53
>PRK11071 esterase YqiA; Provisional
Probab=99.91 E-value=3.9e-22 Score=153.30 Aligned_cols=186 Identities=18% Similarity=0.163 Sum_probs=126.3
Q ss_pred ceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 45 STAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
|+|||+||++++...|.. +.+.+.+.. .+|+|+++|+|||+ ++.++++.+++++++.+
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~------~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~ 61 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHH------PDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGD 61 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhC------CCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCC
Confidence 589999999999999985 345565433 58999999999874 36888999999999988
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++++||||||.+++.+|.++|. + +|+++++... ...+..+.....
T Consensus 62 -~~~lvG~S~Gg~~a~~~a~~~~~--------~---~vl~~~~~~~----------~~~~~~~~~~~~------------ 107 (190)
T PRK11071 62 -PLGLVGSSLGGYYATWLSQCFML--------P---AVVVNPAVRP----------FELLTDYLGENE------------ 107 (190)
T ss_pred -CeEEEEECHHHHHHHHHHHHcCC--------C---EEEECCCCCH----------HHHHHHhcCCcc------------
Confidence 99999999999999999999874 3 5788875321 111111100000
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
... ....+........+. . ..+ +..++.++|+++|+|.+|..++++.+..+.+
T Consensus 108 -----------------~~~-~~~~~~~~~~~~~d~-~---~~~----~~~i~~~~~v~iihg~~De~V~~~~a~~~~~- 160 (190)
T PRK11071 108 -----------------NPY-TGQQYVLESRHIYDL-K---VMQ----IDPLESPDLIWLLQQTGDEVLDYRQAVAYYA- 160 (190)
T ss_pred -----------------ccc-CCCcEEEcHHHHHHH-H---hcC----CccCCChhhEEEEEeCCCCcCCHHHHHHHHH-
Confidence 000 000011111111111 1 111 1223344789999999999999988766655
Q ss_pred hhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
. ++.++++|++|.. ...+++.+.|.+|+.
T Consensus 161 --~--------~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 161 --A--------CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred --h--------cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 3 6777889999988 455999999999985
No 54
>PRK13604 luxD acyl transferase; Provisional
Probab=99.90 E-value=5.9e-22 Score=159.30 Aligned_cols=222 Identities=14% Similarity=0.087 Sum_probs=133.9
Q ss_pred ccccceEEEEcccCC-CCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS-DRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~-~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~~ 102 (325)
.+|..|.-+...+.. .....++||++||+++....+..+++.|.+ .||.|+.+|.||+ |.|+.... .
T Consensus 17 ~dG~~L~Gwl~~P~~~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~--------~G~~vLrfD~rg~~GeS~G~~~---~ 85 (307)
T PRK13604 17 ENGQSIRVWETLPKENSPKKNNTILIASGFARRMDHFAGLAEYLSS--------NGFHVIRYDSLHHVGLSSGTID---E 85 (307)
T ss_pred CCCCEEEEEEEcCcccCCCCCCEEEEeCCCCCChHHHHHHHHHHHH--------CCCEEEEecCCCCCCCCCCccc---c
Confidence 468888877766532 234568899999999987778899999998 9999999999988 99976432 2
Q ss_pred CCHHHHHHHHH---HHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH
Q 020518 103 HDIANAANDLA---NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE 179 (325)
Q Consensus 103 ~~~~~~~~~l~---~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~ 179 (325)
.+......|+. ++++..+.+ ++.|+||||||.+|+..|.+ . .++.+|+.+|..... ..+.
T Consensus 86 ~t~s~g~~Dl~aaid~lk~~~~~-~I~LiG~SmGgava~~~A~~--~--------~v~~lI~~sp~~~l~------d~l~ 148 (307)
T PRK13604 86 FTMSIGKNSLLTVVDWLNTRGIN-NLGLIAASLSARIAYEVINE--I--------DLSFLITAVGVVNLR------DTLE 148 (307)
T ss_pred CcccccHHHHHHHHHHHHhcCCC-ceEEEEECHHHHHHHHHhcC--C--------CCCEEEEcCCcccHH------HHHH
Confidence 33333355654 444444666 89999999999999777763 2 588888888764321 0111
Q ss_pred HHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc--c-CCcccccccCCCC
Q 020518 180 KVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY--R-EMSYWPLLEHPPQ 256 (325)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~ 256 (325)
..+.... ...+ .......+ .-.........+......+ . .......+..++
T Consensus 149 ~~~~~~~---~~~p-~~~lp~~~---------------------d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~- 202 (307)
T PRK13604 149 RALGYDY---LSLP-IDELPEDL---------------------DFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLD- 202 (307)
T ss_pred Hhhhccc---ccCc-cccccccc---------------------ccccccccHHHHHHHHHhcCccccccHHHHHhhcC-
Confidence 1000000 0000 00000000 0000000000011100000 0 001112233343
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH 307 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 307 (325)
+|+|+|+|..|+.++++.++.+.+.+.. .+++++++||++|.+.
T Consensus 203 -~PvLiIHG~~D~lVp~~~s~~l~e~~~s------~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 203 -IPFIAFTANNDSWVKQSEVIDLLDSIRS------EQCKLYSLIGSSHDLG 246 (307)
T ss_pred -CCEEEEEcCCCCccCHHHHHHHHHHhcc------CCcEEEEeCCCccccC
Confidence 7999999999999999999888887653 1289999999999875
No 55
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.90 E-value=3.6e-24 Score=171.48 Aligned_cols=215 Identities=20% Similarity=0.251 Sum_probs=130.4
Q ss_pred eEEEEeCCCCCCCCCC---CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc
Q 020518 80 WRMVLVDLRNHGRSAE---IEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 80 ~~vi~~D~~G~G~S~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
|+|+++|+||+|.|++ ... ..++.+++++++..+++.++.+ +++++||||||.+++.+|+++|+ +|
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~-~~~~vG~S~Gg~~~~~~a~~~p~--------~v 69 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDF--PDYTTDDLAADLEALREALGIK-KINLVGHSMGGMLALEYAAQYPE--------RV 69 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGS--CTHCHHHHHHHHHHHHHHHTTS-SEEEEEETHHHHHHHHHHHHSGG--------GE
T ss_pred CEEEEEeCCCCCCCCCCccCCc--ccccHHHHHHHHHHHHHHhCCC-CeEEEEECCChHHHHHHHHHCch--------hh
Confidence 6899999999999995 333 7899999999999999999999 89999999999999999999999 99
Q ss_pred ceEEEEecCCC--C-CCCCCchh-HHHHHH-HHhhcCCCCCCcHHHHHHHHH-------hhccchhHHHHHhhcccCCCc
Q 020518 157 KQLWVLDSVPG--K-VKTENSEG-EVEKVL-QTLQSLPSSIPSRKWLVNHMM-------ELGFSKSLSEWIGTNLKKSGE 224 (325)
Q Consensus 157 ~~lvli~~~~~--~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 224 (325)
+++|++++++. . ........ ...... ....... ............ .....................
T Consensus 70 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (230)
T PF00561_consen 70 KKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFL--SDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAE 147 (230)
T ss_dssp EEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCH
T ss_pred cCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhhhccc--cccchhhhhhhhhheeeccCccccchhhccchhhhhHHHH
Confidence 99999998630 0 00000000 000000 0000000 000000000000 000000000000000000000
Q ss_pred ccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCc
Q 020518 225 RETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGH 304 (325)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH 304 (325)
.... ..........+...+....+..++ +|++++.|++|..++++....+.+.+++ .++++++++||
T Consensus 148 -~~~~--~~~~~~~~~~~~~~~~~~~l~~i~--~p~l~i~~~~D~~~p~~~~~~~~~~~~~--------~~~~~~~~~GH 214 (230)
T PF00561_consen 148 -TDAF--DNMFWNALGYFSVWDPSPALSNIK--VPTLIIWGEDDPLVPPESSEQLAKLIPN--------SQLVLIEGSGH 214 (230)
T ss_dssp -HHHH--HHHHHHHHHHHHHHHHHHHHTTTT--SEEEEEEETTCSSSHHHHHHHHHHHSTT--------EEEEEETTCCS
T ss_pred -HHHH--hhhccccccccccccccccccccC--CCeEEEEeCCCCCCCHHHHHHHHHhcCC--------CEEEECCCCCh
Confidence 0000 000000111122222333444554 8999999999999999988888888887 99999999999
Q ss_pred cccccChHHHHHHHHH
Q 020518 305 WVHVDNPKGLLEIVAP 320 (325)
Q Consensus 305 ~~~~e~p~~~~~~i~~ 320 (325)
+.+++.|+++++.|.+
T Consensus 215 ~~~~~~~~~~~~~i~~ 230 (230)
T PF00561_consen 215 FAFLEGPDEFNEIIIK 230 (230)
T ss_dssp THHHHSHHHHHHHHH-
T ss_pred HHHhcCHHhhhhhhcC
Confidence 9999999999998863
No 56
>PLN02872 triacylglycerol lipase
Probab=99.90 E-value=4.4e-22 Score=168.61 Aligned_cols=279 Identities=15% Similarity=0.077 Sum_probs=159.2
Q ss_pred ccccccceEEEEcccCCC---CCCCceEEEecCCCCCCCChH------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSD---RPYTSTAFVLHGLLGSGRNWR------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~---~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
+++||..|....+....+ ...+|+|+|+||+++++..|. .+...|++ +||+|+++|+||++.|
T Consensus 50 ~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~--------~GydV~l~n~RG~~~s 121 (395)
T PLN02872 50 QTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILAD--------HGFDVWVGNVRGTRWS 121 (395)
T ss_pred ECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHh--------CCCCcccccccccccc
Confidence 447899998887643221 134789999999999998884 34445665 8999999999998866
Q ss_pred CCCC-----C-CCCCCCHHHHH-HHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 94 AEIE-----G-LDPPHDIANAA-NDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 94 ~~~~-----~-~~~~~~~~~~~-~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
.... + ....+++++++ .|+.++++.+ ..+ +++++||||||.+++.++ .+|+. ..+|+.+++++
T Consensus 122 ~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~~~-~v~~VGhS~Gg~~~~~~~-~~p~~-----~~~v~~~~~l~ 194 (395)
T PLN02872 122 YGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSITNS-KIFIVGHSQGTIMSLAAL-TQPNV-----VEMVEAAALLC 194 (395)
T ss_pred cCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhccCC-ceEEEEECHHHHHHHHHh-hChHH-----HHHHHHHHHhc
Confidence 3211 1 00257899999 7999999876 346 999999999999998555 56751 12588888888
Q ss_pred cCCCCCCCCCchh-HHHH-HHHHh---hcCCCCCCc---HHHHHHHHHhhc----------------cchhH-HHHHhhc
Q 020518 164 SVPGKVKTENSEG-EVEK-VLQTL---QSLPSSIPS---RKWLVNHMMELG----------------FSKSL-SEWIGTN 218 (325)
Q Consensus 164 ~~~~~~~~~~~~~-~~~~-~~~~~---~~~~~~~~~---~~~~~~~~~~~~----------------~~~~~-~~~~~~~ 218 (325)
|............ .+.. .+..+ .....-.+. ...+...+.... +.... ..++...
T Consensus 195 P~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~ 274 (395)
T PLN02872 195 PISYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYE 274 (395)
T ss_pred chhhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcC
Confidence 8754322111111 0000 00001 100010111 111111111000 00000 0000000
Q ss_pred ccC------------CCcccccccChhHHHHhhhcccCCc-ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhh
Q 020518 219 LKK------------SGERETWAFNLDGAVQMFNSYREMS-YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANR 285 (325)
Q Consensus 219 ~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 285 (325)
... ........++..... -...|.+.. ..-.+.+++.++|+++++|++|..++++.++.+.+.++.
T Consensus 275 pagtS~k~~~H~~Q~~~s~~f~~yDyg~~~-n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~ 353 (395)
T PLN02872 275 PHPSSVKNLRHLFQMIRKGTFAHYDYGIFK-NLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPS 353 (395)
T ss_pred CCcchHHHHHHHHHHHhcCCcccCCCCchh-hHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCC
Confidence 000 000001111111111 111122211 111345555458999999999999999887777666653
Q ss_pred cCCCCCCceeEEEecCCCccc---cccChHHHHHHHHHHHhc
Q 020518 286 QGDGSEGKVSVHVLPNAGHWV---HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~gH~~---~~e~p~~~~~~i~~fl~~ 324 (325)
..+++.++++||.. ..+.|+++.+.|.+||++
T Consensus 354 -------~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~ 388 (395)
T PLN02872 354 -------KPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRS 388 (395)
T ss_pred -------ccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHH
Confidence 15788899999963 448899999999999974
No 57
>PRK10566 esterase; Provisional
Probab=99.89 E-value=3.3e-21 Score=156.20 Aligned_cols=209 Identities=19% Similarity=0.182 Sum_probs=126.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH-------HHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI-------ANAANDLANL 115 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-------~~~~~~l~~~ 115 (325)
..|+||++||++++...|..++..|.+ .||+|+++|+||||.+.... ....+ .+..+++.++
T Consensus 26 ~~p~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~d~~g~G~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 94 (249)
T PRK10566 26 PLPTVFFYHGFTSSKLVYSYFAVALAQ--------AGFRVIMPDAPMHGARFSGD---EARRLNHFWQILLQNMQEFPTL 94 (249)
T ss_pred CCCEEEEeCCCCcccchHHHHHHHHHh--------CCCEEEEecCCcccccCCCc---cccchhhHHHHHHHHHHHHHHH
Confidence 468999999999999899999999987 89999999999999864321 11111 1223344333
Q ss_pred HHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 116 VKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 116 l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
++.+ +.+ +++++|||+||.+++.++.++|+ ....++++++.. . ......+. .
T Consensus 95 ~~~l~~~~~~~~~-~i~v~G~S~Gg~~al~~~~~~~~--------~~~~~~~~~~~~-~----------~~~~~~~~--~ 152 (249)
T PRK10566 95 RAAIREEGWLLDD-RLAVGGASMGGMTALGIMARHPW--------VKCVASLMGSGY-F----------TSLARTLF--P 152 (249)
T ss_pred HHHHHhcCCcCcc-ceeEEeecccHHHHHHHHHhCCC--------eeEEEEeeCcHH-H----------HHHHHHhc--c
Confidence 3332 345 89999999999999999999886 333334433221 0 00000000 0
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
...... .. ........+......+....+.++ .++|+++|+|++|.
T Consensus 153 ~~~~~~------------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~i-~~~P~Lii~G~~D~ 198 (249)
T PRK10566 153 PLIPET------------AA---------------------QQAEFNNIVAPLAEWEVTHQLEQL-ADRPLLLWHGLADD 198 (249)
T ss_pred cccccc------------cc---------------------cHHHHHHHHHHHhhcChhhhhhhc-CCCCEEEEEcCCCC
Confidence 000000 00 000000001111111111222332 13799999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.++++..+.+.+.++..+. +.++++..++++||.+. + ...+.+.+||++
T Consensus 199 ~v~~~~~~~l~~~l~~~g~--~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl~~ 247 (249)
T PRK10566 199 VVPAAESLRLQQALRERGL--DKNLTCLWEPGVRHRIT---P-EALDAGVAFFRQ 247 (249)
T ss_pred cCCHHHHHHHHHHHHhcCC--CcceEEEecCCCCCccC---H-HHHHHHHHHHHh
Confidence 9999999988887765432 01278889999999864 3 456788888864
No 58
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.89 E-value=3.4e-21 Score=163.34 Aligned_cols=260 Identities=15% Similarity=0.149 Sum_probs=146.4
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCCh-----HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-----RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
+..+.+.+......++|||++||+..+...+ ..+++.|.+ .||+|+++|++|+|.|.. ..+
T Consensus 48 ~~l~~~~~~~~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~--------~G~~V~~~D~~g~g~s~~------~~~ 113 (350)
T TIGR01836 48 VVLYRYTPVKDNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLE--------RGQDVYLIDWGYPDRADR------YLT 113 (350)
T ss_pred EEEEEecCCCCcCCCCcEEEeccccccceeccCCCCchHHHHHHH--------CCCeEEEEeCCCCCHHHh------cCC
Confidence 3444444432223467899999987655444 578999987 899999999999998754 345
Q ss_pred HHHHHHH-H----HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH--
Q 020518 105 IANAAND-L----ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE-- 177 (325)
Q Consensus 105 ~~~~~~~-l----~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~-- 177 (325)
+++++.+ + ..+++..+.+ +++++||||||.+++.+++++|+ +|+++|+++++............
T Consensus 114 ~~d~~~~~~~~~v~~l~~~~~~~-~i~lvGhS~GG~i~~~~~~~~~~--------~v~~lv~~~~p~~~~~~~~~~~~~~ 184 (350)
T TIGR01836 114 LDDYINGYIDKCVDYICRTSKLD-QISLLGICQGGTFSLCYAALYPD--------KIKNLVTMVTPVDFETPGNMLSNWA 184 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCC-cccEEEECHHHHHHHHHHHhCch--------heeeEEEeccccccCCCCchhhhhc
Confidence 6666533 3 3444556777 99999999999999999999999 99999999986543321111100
Q ss_pred ----HHHHHHHhhcCCCC---------CCc---HHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc
Q 020518 178 ----VEKVLQTLQSLPSS---------IPS---RKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 178 ----~~~~~~~~~~~~~~---------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
.......+..++.. .+. ..............+...++.... ..... ...........++..
T Consensus 185 ~~~~~~~~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~w~~d--~~~~~~~~~~~~~~~ 261 (350)
T TIGR01836 185 RHVDIDLAVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRME-KWIFD--SPDQAGEAFRQFVKD 261 (350)
T ss_pred cccCHHHHHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHH-HHhcC--CcCccHHHHHHHHHH
Confidence 01111111000000 000 000000000000011111111000 00000 000001111111111
Q ss_pred ----cc--C-----CcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC
Q 020518 242 ----YR--E-----MSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 242 ----~~--~-----~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
.. . ......+..+ ++|+++++|++|.+++++..+.+.+.++. ++.++++++ +||...+..
T Consensus 262 ~~~~n~l~~g~~~~~~~~~~l~~i--~~Pvliv~G~~D~i~~~~~~~~~~~~~~~------~~~~~~~~~-~gH~~~~~~ 332 (350)
T TIGR01836 262 FYQQNGLINGEVEIGGRKVDLKNI--KMPILNIYAERDHLVPPDASKALNDLVSS------EDYTELSFP-GGHIGIYVS 332 (350)
T ss_pred HHhcCcccCCeeEECCEEccHHhC--CCCeEEEecCCCCcCCHHHHHHHHHHcCC------CCeEEEEcC-CCCEEEEEC
Confidence 00 0 0011123334 48999999999999999888888777654 126788888 599988765
Q ss_pred ---hHHHHHHHHHHHhc
Q 020518 311 ---PKGLLEIVAPRIAS 324 (325)
Q Consensus 311 ---p~~~~~~i~~fl~~ 324 (325)
++++...|.+||.+
T Consensus 333 ~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 333 GKAQKEVPPAIGKWLQA 349 (350)
T ss_pred chhHhhhhHHHHHHHHh
Confidence 48899999999975
No 59
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.89 E-value=6e-21 Score=166.08 Aligned_cols=254 Identities=11% Similarity=0.060 Sum_probs=151.6
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChH-----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR-----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+....|.+..+...++|||++||+......|+ .++..|.+ +||+|+++|++|+|.|...... ..|
T Consensus 173 ~~eLi~Y~P~t~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~--------qGf~V~~iDwrgpg~s~~~~~~-ddY 243 (532)
T TIGR01838 173 LFQLIQYEPTTETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVE--------QGHTVFVISWRNPDASQADKTF-DDY 243 (532)
T ss_pred cEEEEEeCCCCCcCCCCcEEEECcccccceeeecccchHHHHHHHH--------CCcEEEEEECCCCCcccccCCh-hhh
Confidence 455555655433346799999999998888885 79999998 8999999999999988664321 345
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHH----HHHHHc-cccccCCccCCcceEEEEecCCCCCCCCCch---
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL----HFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTENSE--- 175 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~----~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~--- 175 (325)
..+.+.+.+..+++.++.+ +++++||||||.++. .+++.. ++ +|++++++++...........
T Consensus 244 ~~~~i~~al~~v~~~~g~~-kv~lvG~cmGGtl~a~ala~~aa~~~~~--------rv~slvll~t~~Df~~~G~l~~f~ 314 (532)
T TIGR01838 244 IRDGVIAALEVVEAITGEK-QVNCVGYCIGGTLLSTALAYLAARGDDK--------RIKSATFFTTLLDFSDPGELGVFV 314 (532)
T ss_pred HHHHHHHHHHHHHHhcCCC-CeEEEEECcCcHHHHHHHHHHHHhCCCC--------ccceEEEEecCcCCCCcchhhhhc
Confidence 5566777788888888888 999999999999852 345555 67 899999999876544321110
Q ss_pred --hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhH-HHHHhhcccCCC----cccccc-----cChhHHHHhhhcc-
Q 020518 176 --GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSL-SEWIGTNLKKSG----ERETWA-----FNLDGAVQMFNSY- 242 (325)
Q Consensus 176 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~~~~~- 242 (325)
..+...-+.+.. .... ....+...+......... ..++...+.... .-..|. ........+++.+
T Consensus 315 ~~~~~~~~e~~~~~-~G~l-pg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly 392 (532)
T TIGR01838 315 DEEIVAGIERQNGG-GGYL-DGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLY 392 (532)
T ss_pred CchhHHHHHHHHHh-cCCC-CHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHH
Confidence 001011111111 1111 111111111111111111 111111111000 000111 1112222222111
Q ss_pred c----------CCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH
Q 020518 243 R----------EMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK 312 (325)
Q Consensus 243 ~----------~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~ 312 (325)
. ..+....+..++ +|+++|.|++|.+++++..+.+.+.+++ .+..+++++||.+++++|.
T Consensus 393 ~~N~L~~G~~~v~g~~~dL~~I~--vPvLvV~G~~D~IvP~~sa~~l~~~i~~--------~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 393 LQNALTTGGLEVCGVRLDLSKVK--VPVYIIATREDHIAPWQSAYRGAALLGG--------PKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred hcCCCcCCeeEECCEecchhhCC--CCEEEEeeCCCCcCCHHHHHHHHHHCCC--------CEEEEECCCCCchHhhCCC
Confidence 1 112223444554 8999999999999999988888777765 7888999999999999874
No 60
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.87 E-value=1.8e-19 Score=140.04 Aligned_cols=239 Identities=15% Similarity=0.178 Sum_probs=152.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
..+||-+||-+++..+|+.+.+.|.+ .|.|+|.+++||+|.+..+.+ ..|+-.+...-+.++++.++++.
T Consensus 35 ~gTVv~~hGsPGSH~DFkYi~~~l~~--------~~iR~I~iN~PGf~~t~~~~~--~~~~n~er~~~~~~ll~~l~i~~ 104 (297)
T PF06342_consen 35 LGTVVAFHGSPGSHNDFKYIRPPLDE--------AGIRFIGINYPGFGFTPGYPD--QQYTNEERQNFVNALLDELGIKG 104 (297)
T ss_pred ceeEEEecCCCCCccchhhhhhHHHH--------cCeEEEEeCCCCCCCCCCCcc--cccChHHHHHHHHHHHHHcCCCC
Confidence 45899999999999999999999998 999999999999999999887 78999999999999999999988
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMM 203 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (325)
+++++|||.|+-.|+.+|..+| +.++++++|+................+.++...... ...+.+.
T Consensus 105 ~~i~~gHSrGcenal~la~~~~----------~~g~~lin~~G~r~HkgIrp~~r~~~i~~l~~~lp~-----~~~~~i~ 169 (297)
T PF06342_consen 105 KLIFLGHSRGCENALQLAVTHP----------LHGLVLINPPGLRPHKGIRPLSRMETINYLYDLLPR-----FIINAIM 169 (297)
T ss_pred ceEEEEeccchHHHHHHHhcCc----------cceEEEecCCccccccCcCHHHHHHHHHHHHHHhhH-----HHHHHHH
Confidence 9999999999999999999985 469999998754432222211111222222111100 1111111
Q ss_pred hhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc---cccccCCC-CCCcEEEEeeCCCCCCChHHHHHH
Q 020518 204 ELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY---WPLLEHPP-QGMEIAIVRAEKSDRWDPDVIQRL 279 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~P~l~i~g~~D~~~~~~~~~~~ 279 (325)
... -+++.- +.... +......+.....++ ...++.++ .++|+++++|++|..+..+...+.
T Consensus 170 ~~~-----y~~iG~--KV~~G--------eeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~ 234 (297)
T PF06342_consen 170 YFY-----YRMIGF--KVSDG--------EEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEF 234 (297)
T ss_pred HHH-----HHHhCe--eecCh--------HHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHH
Confidence 000 000000 00000 001111111111111 11122221 248999999999988877666555
Q ss_pred HHHhhhcCC--------------------CCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 280 EGLANRQGD--------------------GSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 280 ~~~~~~~~~--------------------~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
......+.. .+. +..-+.+.+.||+.+-.+++.+++.+.+.|+
T Consensus 235 a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~-~~~sv~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 235 AMKFKGLDHFNIEKEISEEEKPKILKSFASGQ-KGASVFFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred HHHhCCccceeeecCCChhHHHHHHHHHhcCC-ceeEEEEecCChHHhHHHHHHHHHHHHHhhC
Confidence 443322100 000 1334456666999999999999999987763
No 61
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.87 E-value=2.8e-20 Score=151.98 Aligned_cols=116 Identities=34% Similarity=0.529 Sum_probs=93.9
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
...+.|...+.. +++++++||++++...|......+.... ..|+++++|+||||.|. . ..++..
T Consensus 9 ~~~~~~~~~~~~-----~~~i~~~hg~~~~~~~~~~~~~~~~~~~------~~~~~~~~d~~g~g~s~-~----~~~~~~ 72 (282)
T COG0596 9 GVRLAYREAGGG-----GPPLVLLHGFPGSSSVWRPVFKVLPALA------ARYRVIAPDLRGHGRSD-P----AGYSLS 72 (282)
T ss_pred CeEEEEeecCCC-----CCeEEEeCCCCCchhhhHHHHHHhhccc------cceEEEEecccCCCCCC-c----ccccHH
Confidence 445666666653 5599999999999999988444444321 12899999999999997 1 134555
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..++++..++++++.. +++++||||||.+++.++.++|+ +++++|++++...
T Consensus 73 ~~~~~~~~~~~~~~~~-~~~l~G~S~Gg~~~~~~~~~~p~--------~~~~~v~~~~~~~ 124 (282)
T COG0596 73 AYADDLAALLDALGLE-KVVLVGHSMGGAVALALALRHPD--------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHHHHHHHhCCC-ceEEEEecccHHHHHHHHHhcch--------hhheeeEecCCCC
Confidence 5599999999999999 89999999999999999999999 9999999997654
No 62
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.86 E-value=8.5e-20 Score=139.10 Aligned_cols=225 Identities=21% Similarity=0.258 Sum_probs=150.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
..+..++++|=.|+++..|+.+...|. ....++++++||+|.....+ ...+++++++.|..-+...-.
T Consensus 5 ~~~~~L~cfP~AGGsa~~fr~W~~~lp---------~~iel~avqlPGR~~r~~ep---~~~di~~Lad~la~el~~~~~ 72 (244)
T COG3208 5 GARLRLFCFPHAGGSASLFRSWSRRLP---------ADIELLAVQLPGRGDRFGEP---LLTDIESLADELANELLPPLL 72 (244)
T ss_pred CCCceEEEecCCCCCHHHHHHHHhhCC---------chhheeeecCCCcccccCCc---ccccHHHHHHHHHHHhccccC
Confidence 347789999999999999999988777 56799999999999886654 578999999999998884333
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCC-----CCchhHHHHHHHHhhcCCCCCCcHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKT-----ENSEGEVEKVLQTLQSLPSSIPSRK 196 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (325)
+.++.++||||||++|.++|.+... ....+..+++.++.++.... ......+.+.+..+...+......
T Consensus 73 d~P~alfGHSmGa~lAfEvArrl~~-----~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led- 146 (244)
T COG3208 73 DAPFALFGHSMGAMLAFEVARRLER-----AGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLED- 146 (244)
T ss_pred CCCeeecccchhHHHHHHHHHHHHH-----cCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcC-
Confidence 4499999999999999999988755 11246677777665432111 111111112222221111111111
Q ss_pred HHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHH
Q 020518 197 WLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVI 276 (325)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~ 276 (325)
.++.+++... ...-......|.- ....+..||+.++.|++|..++.+..
T Consensus 147 ------------~El~~l~LPi-------------lRAD~~~~e~Y~~------~~~~pl~~pi~~~~G~~D~~vs~~~~ 195 (244)
T COG3208 147 ------------PELMALFLPI-------------LRADFRALESYRY------PPPAPLACPIHAFGGEKDHEVSRDEL 195 (244)
T ss_pred ------------HHHHHHHHHH-------------HHHHHHHhccccc------CCCCCcCcceEEeccCcchhccHHHH
Confidence 1111111111 1111112222221 12234459999999999999999887
Q ss_pred HHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 277 QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+.+.... ..++.+++| |||...++.+++.+.|.+.+.
T Consensus 196 ~~W~~~t~~-------~f~l~~fdG-gHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 196 GAWREHTKG-------DFTLRVFDG-GHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHHHHhhcC-------CceEEEecC-cceehhhhHHHHHHHHHHHhh
Confidence 777766653 389999998 999999999999999998874
No 63
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=8.1e-20 Score=147.35 Aligned_cols=278 Identities=16% Similarity=0.188 Sum_probs=177.0
Q ss_pred ccCCccccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-----------hHHHHHHHHhhhhccCCCCceEEEEeCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-----------WRSFSRNLASTLSQTSASSEWRMVLVDL 87 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~vi~~D~ 87 (325)
+++..+.+...+.|+.+|.... .....|+++||+.+++.. |..++-.=... -+..|.||+.|-
T Consensus 27 le~G~~l~~~~vay~T~Gtln~-~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~i-----Dt~r~fvIc~Nv 100 (368)
T COG2021 27 LESGGVLSDARVAYETYGTLNA-EKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPI-----DTERFFVICTNV 100 (368)
T ss_pred ecCCCcccCcEEEEEecccccc-cCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCC-----CccceEEEEecC
Confidence 3344555677899999998543 446789999999996533 33332211000 025699999999
Q ss_pred CCCC-CCCCCCCCC----------CCCCHHHHHHHHHHHHHHhCCCCCEE-EEEeChhHHHHHHHHHHccccccCCccCC
Q 020518 88 RNHG-RSAEIEGLD----------PPHDIANAANDLANLVKAKGWDWPDV-VIGHSMGGKVALHFAQSCARADYGQFVAL 155 (325)
Q Consensus 88 ~G~G-~S~~~~~~~----------~~~~~~~~~~~l~~~l~~~~~~~~~~-lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~ 155 (325)
.|.+ .|+.|.... +.+++.|++..-+.+++++|++ ++. +||-||||+.|++++.+||+ +
T Consensus 101 lG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~-~l~avvGgSmGGMqaleWa~~yPd--------~ 171 (368)
T COG2021 101 LGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIK-KLAAVVGGSMGGMQALEWAIRYPD--------R 171 (368)
T ss_pred CCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcc-eEeeeeccChHHHHHHHHHHhChH--------H
Confidence 9976 555544221 4578999999999999999999 655 99999999999999999999 9
Q ss_pred cceEEEEecCCCCCCCCCchhHHHHHH-HHhhcCCCC---------CCcH-HHHHHHHH--hhccchhHHHHHhh-----
Q 020518 156 PKQLWVLDSVPGKVKTENSEGEVEKVL-QTLQSLPSS---------IPSR-KWLVNHMM--ELGFSKSLSEWIGT----- 217 (325)
Q Consensus 156 v~~lvli~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---------~~~~-~~~~~~~~--~~~~~~~~~~~~~~----- 217 (325)
|++++.+++++....... .+.... +.+..-+.. .+.. ....+.+. .......+.+.+..
T Consensus 172 V~~~i~ia~~~r~s~~~i---a~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~ 248 (368)
T COG2021 172 VRRAIPIATAARLSAQNI---AFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQAD 248 (368)
T ss_pred HhhhheecccccCCHHHH---HHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccccc
Confidence 999999998754432111 111111 111111111 0000 01111110 01111111111111
Q ss_pred -------------cccCCCcccccccChhHHHHhhhcccCCccccc-------ccCCCCCCcEEEEeeCCCCCCChHHHH
Q 020518 218 -------------NLKKSGERETWAFNLDGAVQMFNSYREMSYWPL-------LEHPPQGMEIAIVRAEKSDRWDPDVIQ 277 (325)
Q Consensus 218 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~P~l~i~g~~D~~~~~~~~~ 277 (325)
.+.....+...+++...+..+.+.....+.... +++++ +|++++--..|..+|++..+
T Consensus 249 ~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~--~~~lv~gi~sD~lfp~~~~~ 326 (368)
T COG2021 249 PLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAALARIK--APVLVVGITSDWLFPPELQR 326 (368)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCc--cCEEEEEecccccCCHHHHH
Confidence 111122334445666666666555555554443 66666 89999999999999999988
Q ss_pred HHHHHhhhcCCCCCCcee-EEEec-CCCccccccChHHHHHHHHHHHhc
Q 020518 278 RLEGLANRQGDGSEGKVS-VHVLP-NAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~-~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+.+.++. +. +++++ ..||..++...+.+...|.+||+.
T Consensus 327 ~~~~~L~~--------~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 327 ALAEALPA--------AGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHHhccc--------cCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 88888876 33 65654 479999999999999999999975
No 64
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.84 E-value=7.5e-19 Score=167.26 Aligned_cols=256 Identities=13% Similarity=0.161 Sum_probs=150.1
Q ss_pred ceEEEEcccCCC----CCCCceEEEecCCCCCCCChHHH-----HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSD----RPYTSTAFVLHGLLGSGRNWRSF-----SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 29 ~l~y~~~~~~~~----~~~~~~vv~~HG~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
.+..+.|.+... ...++||||+||++.+...|+.. ++.|.+ .||+|+++| +|.|+.+...
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~--------~g~~v~~~d---~G~~~~~~~~ 116 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHR--------AGLDPWVID---FGSPDKVEGG 116 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHH--------CCCEEEEEc---CCCCChhHcC
Confidence 444455544321 24679999999999999999864 788876 899999999 4666654321
Q ss_pred CCCCCHHHHHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHc-cccccCCccCCcceEEEEecCCCCCCCCC--
Q 020518 100 DPPHDIANAANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSC-ARADYGQFVALPKQLWVLDSVPGKVKTEN-- 173 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~-p~~~~~~~~~~v~~lvli~~~~~~~~~~~-- 173 (325)
...++.+++..+.+.++. ...+ +++++||||||.+++.+++.+ ++ +|+++|+++++........
T Consensus 117 -~~~~l~~~i~~l~~~l~~v~~~~~~-~v~lvG~s~GG~~a~~~aa~~~~~--------~v~~lvl~~~~~d~~~~~~~~ 186 (994)
T PRK07868 117 -MERNLADHVVALSEAIDTVKDVTGR-DVHLVGYSQGGMFCYQAAAYRRSK--------DIASIVTFGSPVDTLAALPMG 186 (994)
T ss_pred -ccCCHHHHHHHHHHHHHHHHHhhCC-ceEEEEEChhHHHHHHHHHhcCCC--------ccceEEEEecccccCCCCccc
Confidence 236778877777766654 3456 899999999999999998755 55 8999999888743321100
Q ss_pred chhHH-HH---H-HHHhhcCCCCCCcH-H-------------HHHHHHHhhccchh-------HHHHHhhcccCCCcccc
Q 020518 174 SEGEV-EK---V-LQTLQSLPSSIPSR-K-------------WLVNHMMELGFSKS-------LSEWIGTNLKKSGERET 227 (325)
Q Consensus 174 ~~~~~-~~---~-~~~~~~~~~~~~~~-~-------------~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 227 (325)
..... .. + ...+.... ..+.. . .....+........ ..++.... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~-~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~--------~ 257 (994)
T PRK07868 187 IPAGLAAAAADFMADHVFNRL-DIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESE--------G 257 (994)
T ss_pred chhhhhhcccccchhhhhhcC-CCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHh--------h
Confidence 00000 00 0 00000000 00100 0 00000000000000 00111000 0
Q ss_pred c-ccChhHHHHhhhcccC--------Ccc---cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCcee
Q 020518 228 W-AFNLDGAVQMFNSYRE--------MSY---WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVS 295 (325)
Q Consensus 228 ~-~~~~~~~~~~~~~~~~--------~~~---~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (325)
| .........+...+.. ... ...+.+++ +|+|+|+|++|.+++++..+.+.+.+++ .+
T Consensus 258 w~~~~g~~~~~~~~~~~~~n~~~~g~~~~~~~~~~L~~i~--~P~L~i~G~~D~ivp~~~~~~l~~~i~~--------a~ 327 (994)
T PRK07868 258 WIAWSGPAISELLKQFIAHNRMMTGGFAINGQMVTLADIT--CPVLAFVGEVDDIGQPASVRGIRRAAPN--------AE 327 (994)
T ss_pred ccccchHHHHHHHHHHHHhCcccCceEEECCEEcchhhCC--CCEEEEEeCCCCCCCHHHHHHHHHhCCC--------Ce
Confidence 1 0111112222222111 001 11345555 8999999999999999998888887766 77
Q ss_pred E-EEecCCCcccccc---ChHHHHHHHHHHHhc
Q 020518 296 V-HVLPNAGHWVHVD---NPKGLLEIVAPRIAS 324 (325)
Q Consensus 296 ~-~~~~~~gH~~~~e---~p~~~~~~i~~fl~~ 324 (325)
+ .+++++||+.++- .|+++...|.+||+.
T Consensus 328 ~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~ 360 (994)
T PRK07868 328 VYESLIRAGHFGLVVGSRAAQQTWPTVADWVKW 360 (994)
T ss_pred EEEEeCCCCCEeeeechhhhhhhChHHHHHHHH
Confidence 7 6789999998873 678888999999864
No 65
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.83 E-value=2.2e-19 Score=133.12 Aligned_cols=145 Identities=25% Similarity=0.408 Sum_probs=110.1
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
+||++||++++...|..+...|++ .||.|+.+|+||+|.+.. ....+++.+++. ....+.+ ++
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~--------~G~~v~~~~~~~~~~~~~------~~~~~~~~~~~~--~~~~~~~-~i 63 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAE--------QGYAVVAFDYPGHGDSDG------ADAVERVLADIR--AGYPDPD-RI 63 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHH--------TTEEEEEESCTTSTTSHH------SHHHHHHHHHHH--HHHCTCC-EE
T ss_pred CEEEECCCCCCHHHHHHHHHHHHH--------CCCEEEEEecCCCCccch------hHHHHHHHHHHH--hhcCCCC-cE
Confidence 589999999999999999999998 899999999999999833 222333333332 1123566 99
Q ss_pred EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhh
Q 020518 126 VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMEL 205 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (325)
+++|||+||.+++.++.+. . +++++|++++.+..
T Consensus 64 ~l~G~S~Gg~~a~~~~~~~-~--------~v~~~v~~~~~~~~------------------------------------- 97 (145)
T PF12695_consen 64 ILIGHSMGGAIAANLAARN-P--------RVKAVVLLSPYPDS------------------------------------- 97 (145)
T ss_dssp EEEEETHHHHHHHHHHHHS-T--------TESEEEEESESSGC-------------------------------------
T ss_pred EEEEEccCcHHHHHHhhhc-c--------ceeEEEEecCccch-------------------------------------
Confidence 9999999999999999998 4 79999999983100
Q ss_pred ccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhh
Q 020518 206 GFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANR 285 (325)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 285 (325)
..+... ++|+++++|++|..++++..+.+.+.++.
T Consensus 98 -------------------------------------------~~~~~~--~~pv~~i~g~~D~~~~~~~~~~~~~~~~~ 132 (145)
T PF12695_consen 98 -------------------------------------------EDLAKI--RIPVLFIHGENDPLVPPEQVRRLYEALPG 132 (145)
T ss_dssp -------------------------------------------HHHTTT--TSEEEEEEETT-SSSHHHHHHHHHHHHCS
T ss_pred -------------------------------------------hhhhcc--CCcEEEEEECCCCcCCHHHHHHHHHHcCC
Confidence 000111 15999999999999988888887776662
Q ss_pred cCCCCCCceeEEEecCCCcc
Q 020518 286 QGDGSEGKVSVHVLPNAGHW 305 (325)
Q Consensus 286 ~~~~~~~~~~~~~~~~~gH~ 305 (325)
+.+++++++++|+
T Consensus 133 -------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 133 -------PKELYIIPGAGHF 145 (145)
T ss_dssp -------SEEEEEETTS-TT
T ss_pred -------CcEEEEeCCCcCc
Confidence 2899999999996
No 66
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.82 E-value=7.2e-18 Score=138.02 Aligned_cols=217 Identities=15% Similarity=0.147 Sum_probs=132.0
Q ss_pred ccCCccccccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCC--CCCCCC
Q 020518 19 LNSPTTRSLQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDL--RNHGRS 93 (325)
Q Consensus 19 ~~~~~~~~~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~--~G~G~S 93 (325)
.+...-..+..+.|..+.++.. ..+.|+|+|+||++++...|... +..+++. .|+.|+++|. +|+|.+
T Consensus 16 ~~~~s~~~~~~~~~~v~~P~~~~~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~-------~g~~Vv~Pd~~~~g~~~~ 88 (275)
T TIGR02821 16 YRHKSETCGVPMTFGVFLPPQAAAGPVPVLWYLSGLTCTHENFMIKAGAQRFAAE-------HGLALVAPDTSPRGTGIA 88 (275)
T ss_pred EEEeccccCCceEEEEEcCCCccCCCCCEEEEccCCCCCccHHHhhhHHHHHHhh-------cCcEEEEeCCCCCcCCCC
Confidence 3333334566777888876432 23478999999999999888543 3345432 5899999998 555543
Q ss_pred CCCC-----------------CCCCCCCHHH-HHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 94 AEIE-----------------GLDPPHDIAN-AANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 94 ~~~~-----------------~~~~~~~~~~-~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
.... .....++..+ +++++..++++ ++.+ +++++||||||.+++.++.++|+
T Consensus 89 ~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~G~S~GG~~a~~~a~~~p~------ 161 (275)
T TIGR02821 89 GEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGE-RQGITGHSMGGHGALVIALKNPD------ 161 (275)
T ss_pred CCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCC-ceEEEEEChhHHHHHHHHHhCcc------
Confidence 2110 0001233333 46788888877 3556 89999999999999999999999
Q ss_pred cCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccCh
Q 020518 153 VALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNL 232 (325)
Q Consensus 153 ~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (325)
.+++++++++.......... .... ..++... .. .....+.
T Consensus 162 --~~~~~~~~~~~~~~~~~~~~---------------------~~~~------------~~~l~~~----~~-~~~~~~~ 201 (275)
T TIGR02821 162 --RFKSVSAFAPIVAPSRCPWG---------------------QKAF------------SAYLGAD----EA-AWRSYDA 201 (275)
T ss_pred --cceEEEEECCccCcccCcch---------------------HHHH------------HHHhccc----cc-chhhcch
Confidence 99999998876432110000 0000 0011000 00 0000000
Q ss_pred hHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCCh-HHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 233 DGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDP-DVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
...........|+++++|+.|..++. .....+.+.+...+. ++++.++||++|....
T Consensus 202 ---------------~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~~~~l~~~g~----~v~~~~~~g~~H~f~~ 259 (275)
T TIGR02821 202 ---------------SLLVADGGRHSTILIDQGTADQFLDEQLRPDAFEQACRAAGQ----ALTLRRQAGYDHSYYF 259 (275)
T ss_pred ---------------HHHHhhcccCCCeeEeecCCCcccCccccHHHHHHHHHHcCC----CeEEEEeCCCCccchh
Confidence 00001111225888889999999887 455666666666554 3899999999998753
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.81 E-value=1e-18 Score=140.00 Aligned_cols=103 Identities=19% Similarity=0.165 Sum_probs=84.9
Q ss_pred CceEEEecCCCCCCC----ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH---H
Q 020518 44 TSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL---V 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~---l 116 (325)
+++|||+||+++... .|..+++.|++ .||+|+++|+||||.|.... ...+++.+++|+..+ +
T Consensus 25 ~~~VlllHG~g~~~~~~~~~~~~la~~La~--------~Gy~Vl~~Dl~G~G~S~g~~---~~~~~~~~~~Dv~~ai~~L 93 (266)
T TIGR03101 25 RGVVIYLPPFAEEMNKSRRMVALQARAFAA--------GGFGVLQIDLYGCGDSAGDF---AAARWDVWKEDVAAAYRWL 93 (266)
T ss_pred ceEEEEECCCcccccchhHHHHHHHHHHHH--------CCCEEEEECCCCCCCCCCcc---ccCCHHHHHHHHHHHHHHH
Confidence 678999999987544 45556677776 89999999999999997654 345788888887665 4
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++.+.+ +++|+||||||.+++.+|.++|+ +++++|+++|..
T Consensus 94 ~~~~~~-~v~LvG~SmGG~vAl~~A~~~p~--------~v~~lVL~~P~~ 134 (266)
T TIGR03101 94 IEQGHP-PVTLWGLRLGALLALDAANPLAA--------KCNRLVLWQPVV 134 (266)
T ss_pred HhcCCC-CEEEEEECHHHHHHHHHHHhCcc--------ccceEEEecccc
Confidence 555667 99999999999999999999999 999999999763
No 68
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.81 E-value=2.3e-18 Score=127.33 Aligned_cols=220 Identities=12% Similarity=0.088 Sum_probs=141.2
Q ss_pred CCceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 43 YTSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+...+|++||+-++... ...++..|.+ .|+.++.+|++|.|.|...-. .-.....|+|+..+++.+.
T Consensus 32 s~e~vvlcHGfrS~Kn~~~~~~vA~~~e~--------~gis~fRfDF~GnGeS~gsf~---~Gn~~~eadDL~sV~q~~s 100 (269)
T KOG4667|consen 32 STEIVVLCHGFRSHKNAIIMKNVAKALEK--------EGISAFRFDFSGNGESEGSFY---YGNYNTEADDLHSVIQYFS 100 (269)
T ss_pred CceEEEEeeccccccchHHHHHHHHHHHh--------cCceEEEEEecCCCCcCCccc---cCcccchHHHHHHHHHHhc
Confidence 46789999999886643 2345666666 899999999999999987542 2344555699999999885
Q ss_pred CCCC--EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 121 WDWP--DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 121 ~~~~--~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
-..+ .+++|||-||.+++.+|.++++ ++-+|-+++-..... .+
T Consensus 101 ~~nr~v~vi~gHSkGg~Vvl~ya~K~~d---------~~~viNcsGRydl~~----------~I---------------- 145 (269)
T KOG4667|consen 101 NSNRVVPVILGHSKGGDVVLLYASKYHD---------IRNVINCSGRYDLKN----------GI---------------- 145 (269)
T ss_pred cCceEEEEEEeecCccHHHHHHHHhhcC---------chheEEcccccchhc----------ch----------------
Confidence 3312 4689999999999999999986 677776665422110 00
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
.....+...+|+.+.-........-.+........+...-..+..+...+|++.||||-++|..|.++|.+.+..
T Consensus 146 -----~eRlg~~~l~~ike~Gfid~~~rkG~y~~rvt~eSlmdrLntd~h~aclkId~~C~VLTvhGs~D~IVPve~Ake 220 (269)
T KOG4667|consen 146 -----NERLGEDYLERIKEQGFIDVGPRKGKYGYRVTEESLMDRLNTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKE 220 (269)
T ss_pred -----hhhhcccHHHHHHhCCceecCcccCCcCceecHHHHHHHHhchhhhhhcCcCccCceEEEeccCCceeechhHHH
Confidence 000111122222222111111100000111111111222233455566678888999999999999999999999
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
+++.+++ .++.++||+.|.....+ ++.+.....|.
T Consensus 221 fAk~i~n--------H~L~iIEgADHnyt~~q-~~l~~lgl~f~ 255 (269)
T KOG4667|consen 221 FAKIIPN--------HKLEIIEGADHNYTGHQ-SQLVSLGLEFI 255 (269)
T ss_pred HHHhccC--------CceEEecCCCcCccchh-hhHhhhcceeE
Confidence 9888887 89999999999876543 44444444443
No 69
>PRK11460 putative hydrolase; Provisional
Probab=99.80 E-value=1.1e-17 Score=133.11 Aligned_cols=180 Identities=14% Similarity=0.181 Sum_probs=118.8
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--------CCCCC---CHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG--------LDPPH---DIANAAN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~--------~~~~~---~~~~~~~ 110 (325)
+.++.|||+||++++...|..+.+.|.+. ++.+..++++|...+..... ..... .+.+..+
T Consensus 14 ~~~~~vIlLHG~G~~~~~~~~l~~~l~~~--------~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~ 85 (232)
T PRK11460 14 PAQQLLLLFHGVGDNPVAMGEIGSWFAPA--------FPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMP 85 (232)
T ss_pred CCCcEEEEEeCCCCChHHHHHHHHHHHHH--------CCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHH
Confidence 45789999999999999999999999863 33344444445432211000 00111 1223333
Q ss_pred HHHHHH----HHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 111 DLANLV----KAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 111 ~l~~~l----~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
.+.+++ ++.+++ .+++++|||+||.+++.++.++|+ .+.+++.+++.....
T Consensus 86 ~l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~--------~~~~vv~~sg~~~~~---------------- 141 (232)
T PRK11460 86 TFIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPG--------LAGRVIAFSGRYASL---------------- 141 (232)
T ss_pred HHHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCC--------cceEEEEeccccccc----------------
Confidence 333333 333432 279999999999999999999998 777777665421000
Q ss_pred hcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
+ . .. ..++|+++++|
T Consensus 142 -------~---------------~-----------------------------------------~~--~~~~pvli~hG 156 (232)
T PRK11460 142 -------P---------------E-----------------------------------------TA--PTATTIHLIHG 156 (232)
T ss_pred -------c---------------c-----------------------------------------cc--cCCCcEEEEec
Confidence 0 0 00 01269999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHH
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 322 (325)
++|++++.+..+.+.+.+...+. ++++++++++||.+..+.-+.+.+.|.++|
T Consensus 157 ~~D~vvp~~~~~~~~~~L~~~g~----~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 157 GEDPVIDVAHAVAAQEALISLGG----DVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred CCCCccCHHHHHHHHHHHHHCCC----CeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 99999999999888888876543 389999999999997665566666665555
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=7.4e-18 Score=129.45 Aligned_cols=192 Identities=14% Similarity=0.118 Sum_probs=132.4
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-C
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-W 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-~ 121 (325)
..++|++.||...+......+...|..+ -+++++++|++|+|.|...+. .....+.++.+.++|++-. .
T Consensus 59 ~~~~lly~hGNa~Dlgq~~~~~~~l~~~-------ln~nv~~~DYSGyG~S~G~ps---E~n~y~Di~avye~Lr~~~g~ 128 (258)
T KOG1552|consen 59 AHPTLLYSHGNAADLGQMVELFKELSIF-------LNCNVVSYDYSGYGRSSGKPS---ERNLYADIKAVYEWLRNRYGS 128 (258)
T ss_pred cceEEEEcCCcccchHHHHHHHHHHhhc-------ccceEEEEecccccccCCCcc---cccchhhHHHHHHHHHhhcCC
Confidence 3589999999976666555555556543 378999999999999998774 3445555555555555544 2
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNH 201 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (325)
+.+++|+|+|+|...++.+|++.| +.++||.+|..... +.+..
T Consensus 129 ~~~Iil~G~SiGt~~tv~Lasr~~----------~~alVL~SPf~S~~-------------rv~~~-------------- 171 (258)
T KOG1552|consen 129 PERIILYGQSIGTVPTVDLASRYP----------LAAVVLHSPFTSGM-------------RVAFP-------------- 171 (258)
T ss_pred CceEEEEEecCCchhhhhHhhcCC----------cceEEEeccchhhh-------------hhhcc--------------
Confidence 339999999999999999999975 68999998763221 00000
Q ss_pred HHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHH
Q 020518 202 MMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEG 281 (325)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~ 281 (325)
. .. ..+.++ .+ .....+..+ +||+|+++|.+|++++......+.+
T Consensus 172 ----------------~----~~-~~~~~d---------~f---~~i~kI~~i--~~PVLiiHgtdDevv~~sHg~~Lye 216 (258)
T KOG1552|consen 172 ----------------D----TK-TTYCFD---------AF---PNIEKISKI--TCPVLIIHGTDDEVVDFSHGKALYE 216 (258)
T ss_pred ----------------C----cc-eEEeec---------cc---cccCcceec--cCCEEEEecccCceecccccHHHHH
Confidence 0 00 000000 00 001223333 4899999999999999998888888
Q ss_pred HhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 282 LANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..+. ..+..++.|+||.-. +...++.+.+.+|+..
T Consensus 217 ~~k~-------~~epl~v~g~gH~~~-~~~~~yi~~l~~f~~~ 251 (258)
T KOG1552|consen 217 RCKE-------KVEPLWVKGAGHNDI-ELYPEYIEHLRRFISS 251 (258)
T ss_pred hccc-------cCCCcEEecCCCccc-ccCHHHHHHHHHHHHH
Confidence 8775 258889999999765 5566788888888865
No 71
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.79 E-value=5.3e-17 Score=126.09 Aligned_cols=261 Identities=14% Similarity=0.135 Sum_probs=159.7
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHH--HHHHhhhhccCCCCceEEEEeCCCCCCCCC--CCCCCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFS--RNLASTLSQTSASSEWRMVLVDLRNHGRSA--EIEGLDPP 102 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~--~~~~~~~~ 102 (325)
..++...+|.... ++|++|-.|.++.+... |..+. +..++.. ..+.|+.+|.|||-.-. .+.+. ..
T Consensus 32 G~v~V~V~Gd~~~--~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~------~~fcv~HV~~PGqe~gAp~~p~~y-~y 102 (326)
T KOG2931|consen 32 GVVHVTVYGDPKG--NKPAIITYHDLGLNHKSCFQGFFNFPDMAEIL------EHFCVYHVDAPGQEDGAPSFPEGY-PY 102 (326)
T ss_pred ccEEEEEecCCCC--CCceEEEecccccchHhHhHHhhcCHhHHHHH------hheEEEecCCCccccCCccCCCCC-CC
Confidence 5788888887533 68889999999998755 55432 2222222 45899999999995443 33321 35
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 103 HDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
.|+++++++|..++++++.+ .++-+|--.|+.|..++|..||+ +|.+||||++.+.... +......++.
T Consensus 103 Psmd~LAd~l~~VL~~f~lk-~vIg~GvGAGAyIL~rFAl~hp~--------rV~GLvLIn~~~~a~g--wiew~~~K~~ 171 (326)
T KOG2931|consen 103 PSMDDLADMLPEVLDHFGLK-SVIGMGVGAGAYILARFALNHPE--------RVLGLVLINCDPCAKG--WIEWAYNKVS 171 (326)
T ss_pred CCHHHHHHHHHHHHHhcCcc-eEEEecccccHHHHHHHHhcChh--------heeEEEEEecCCCCch--HHHHHHHHHH
Confidence 59999999999999999999 99999999999999999999999 9999999998764422 2222222222
Q ss_pred HHh-hcCCCCCCcHHHHHHHHHhhccc---hhHHHHHhhcccCCCcccccccChhHHHHhhhccc-CCcccccccCC--C
Q 020518 183 QTL-QSLPSSIPSRKWLVNHMMELGFS---KSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYR-EMSYWPLLEHP--P 255 (325)
Q Consensus 183 ~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~ 255 (325)
..+ ............+....+..... ..+.+.....+. ...+......++..|. +.|+....... .
T Consensus 172 s~~l~~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~-------~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~t 244 (326)
T KOG2931|consen 172 SNLLYYYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLG-------ERLNPKNLALFLNAYNGRRDLSIERPKLGTT 244 (326)
T ss_pred HHHHHhhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHH-------hcCChhHHHHHHHHhcCCCCccccCCCcCcc
Confidence 111 11111111111111111111111 111111111111 1112333333333332 22222222221 2
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.+||++++.|.+.+.+.. +..+...+.. .++.+..+.+||-.++.++|..+++.+.-|++
T Consensus 245 lkc~vllvvGd~Sp~~~~--vv~~n~~Ldp------~~ttllk~~d~g~l~~e~qP~kl~ea~~~Flq 304 (326)
T KOG2931|consen 245 LKCPVLLVVGDNSPHVSA--VVECNSKLDP------TYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQ 304 (326)
T ss_pred ccccEEEEecCCCchhhh--hhhhhcccCc------ccceEEEEcccCCcccccCchHHHHHHHHHHc
Confidence 359999999999866543 2222222222 24899999999999999999999999999986
No 72
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.78 E-value=5.1e-18 Score=134.76 Aligned_cols=263 Identities=17% Similarity=0.199 Sum_probs=141.8
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCC-h-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-W-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
.+|..+-.....+ +.+..+|.||++||+.+++.+ | +.+++.+.+ +||.|++++.|||+.+..... ..
T Consensus 57 pdg~~~~ldw~~~-p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~--------rg~~~Vv~~~Rgcs~~~n~~p--~~ 125 (345)
T COG0429 57 PDGGFIDLDWSED-PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSR--------RGWLVVVFHFRGCSGEANTSP--RL 125 (345)
T ss_pred CCCCEEEEeeccC-ccccCCceEEEEeccCCCCcCHHHHHHHHHHHh--------cCCeEEEEecccccCCcccCc--ce
Confidence 4555555554443 334567899999999776643 3 346666666 899999999999998876432 12
Q ss_pred CCHHHHHHHHHHHHH---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC------CCCC
Q 020518 103 HDIANAANDLANLVK---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV------KTEN 173 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~------~~~~ 173 (325)
|+ .-..+|+..+++ +....+++..+|.|+||.+...|..+..+ + ..+.+.+.++.+.... ....
T Consensus 126 yh-~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~-----d-~~~~aa~~vs~P~Dl~~~~~~l~~~~ 198 (345)
T COG0429 126 YH-SGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGD-----D-LPLDAAVAVSAPFDLEACAYRLDSGF 198 (345)
T ss_pred ec-ccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhcc-----C-cccceeeeeeCHHHHHHHHHHhcCch
Confidence 21 111244444443 33455599999999999655555555443 1 2455555554331110 0011
Q ss_pred chhHHHH-HHHHhhcCCCCCCcHHHHHHHHHh--hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 174 SEGEVEK-VLQTLQSLPSSIPSRKWLVNHMME--LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 174 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
+.....+ +.+.+.. .+...+.. ..........++................-.+.+....|++....+.
T Consensus 199 s~~ly~r~l~~~L~~---------~~~~kl~~l~~~~p~~~~~~ik~~~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~ 269 (345)
T COG0429 199 SLRLYSRYLLRNLKR---------NAARKLKELEPSLPGTVLAAIKRCRTIREFDDLLTAPLHGFADAEDYYRQASSLPL 269 (345)
T ss_pred hhhhhHHHHHHHHHH---------HHHHHHHhcCcccCcHHHHHHHhhchHHhccceeeecccCCCcHHHHHHhcccccc
Confidence 1000000 0011000 00000000 0011111111111111111111112223344444555666666677
Q ss_pred ccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc----ChH-HHHHHHHHHHh
Q 020518 251 LEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD----NPK-GLLEIVAPRIA 323 (325)
Q Consensus 251 ~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e----~p~-~~~~~i~~fl~ 323 (325)
++.|. +|+|+|++.+|++++++.+.......+ |++.+.+-+.+||.-++. +|. ...+.|.+||+
T Consensus 270 L~~Ir--~PtLii~A~DDP~~~~~~iP~~~~~~n-------p~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~ 338 (345)
T COG0429 270 LPKIR--KPTLIINAKDDPFMPPEVIPKLQEMLN-------PNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLD 338 (345)
T ss_pred ccccc--cceEEEecCCCCCCChhhCCcchhcCC-------CceEEEeecCCceEEeccCccccchhhHHHHHHHHHH
Confidence 77777 799999999999999977665555311 349999999999999987 443 45556666664
No 73
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.78 E-value=2.8e-17 Score=129.61 Aligned_cols=261 Identities=13% Similarity=0.120 Sum_probs=139.7
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC-hHHHH--HHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-CCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN-WRSFS--RNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-PPH 103 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~-~~~~~--~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-~~~ 103 (325)
..++....|... .++|++|-.|-.|.+... |..+. +...+.. +.+.++-+|.||+..-...-..+ ...
T Consensus 9 G~v~V~v~G~~~--~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~------~~f~i~Hi~aPGqe~ga~~~p~~y~yP 80 (283)
T PF03096_consen 9 GSVHVTVQGDPK--GNKPAILTYHDVGLNHKSCFQGFFNFEDMQEIL------QNFCIYHIDAPGQEEGAATLPEGYQYP 80 (283)
T ss_dssp EEEEEEEESS----TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHH------TTSEEEEEE-TTTSTT-----TT----
T ss_pred eEEEEEEEecCC--CCCceEEEeccccccchHHHHHHhcchhHHHHh------hceEEEEEeCCCCCCCccccccccccc
Confidence 367777777742 269999999999987765 65542 2222222 78899999999997654433211 345
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
|++++++++..++++++++ .++.+|--.||.|..++|..+|+ +|.++||+++.+.... +.+....++..
T Consensus 81 smd~LAe~l~~Vl~~f~lk-~vIg~GvGAGAnIL~rfAl~~p~--------~V~GLiLvn~~~~~~g--w~Ew~~~K~~~ 149 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLK-SVIGFGVGAGANILARFALKHPE--------RVLGLILVNPTCTAAG--WMEWFYQKLSS 149 (283)
T ss_dssp -HHHHHCTHHHHHHHHT----EEEEEETHHHHHHHHHHHHSGG--------GEEEEEEES---S-----HHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCcc-EEEEEeeccchhhhhhccccCcc--------ceeEEEEEecCCCCcc--HHHHHHHHHhc
Confidence 9999999999999999999 99999999999999999999999 9999999998764422 11111111111
Q ss_pred H-hhcCCCCCCcHHHHHHHHHhhcc---chhHHHHHhhcccCCCcccccccChhHHHHhhhcc-cCCcccccccCCCCCC
Q 020518 184 T-LQSLPSSIPSRKWLVNHMMELGF---SKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY-REMSYWPLLEHPPQGM 258 (325)
Q Consensus 184 ~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (325)
. +............+......... ...+.+.....+.. ..+......++..+ .+.++....+... |
T Consensus 150 ~~L~~~gmt~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~-------~~Np~Nl~~f~~sy~~R~DL~~~~~~~~--c 220 (283)
T PF03096_consen 150 WLLYSYGMTSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDE-------RINPKNLALFLNSYNSRTDLSIERPSLG--C 220 (283)
T ss_dssp ------CTTS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT--------TTHHHHHHHHHHHHT-----SECTTCC--S
T ss_pred ccccccccccchHHhhhhcccccccccccHHHHHHHHHHHhc-------CCCHHHHHHHHHHHhccccchhhcCCCC--C
Confidence 1 11111111111111111111100 11111111111111 11233444444443 2334444444443 9
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+|+|.|+..+... .+..+...+.. .++++..+++||=.+..|+|+.+++.++=||+.
T Consensus 221 ~vLlvvG~~Sp~~~--~vv~~ns~Ldp------~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 221 PVLLVVGDNSPHVD--DVVEMNSKLDP------TKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp -EEEEEETTSTTHH--HHHHHHHHS-C------CCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred CeEEEEecCCcchh--hHHHHHhhcCc------ccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 99999999976543 23344444432 249999999999999999999999999999974
No 74
>PLN02442 S-formylglutathione hydrolase
Probab=99.78 E-value=7.2e-17 Score=132.35 Aligned_cols=123 Identities=15% Similarity=0.137 Sum_probs=84.2
Q ss_pred ccceEEEEcccCCC-CCCCceEEEecCCCCCCCChHHH---HHHHHhhhhccCCCCceEEEEeCCCCCCC-----CCC--
Q 020518 27 LQTLAYEEVRSSSD-RPYTSTAFVLHGLLGSGRNWRSF---SRNLASTLSQTSASSEWRMVLVDLRNHGR-----SAE-- 95 (325)
Q Consensus 27 ~~~l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-----S~~-- 95 (325)
+..+.|..+-|+.. ....|+|+|+||++++...|... ...+.. .|+.|+.+|..++|. +..
T Consensus 29 ~~~~~~~vy~P~~~~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~--------~g~~Vv~pd~~~~g~~~~~~~~~~~ 100 (283)
T PLN02442 29 GCSMTFSVYFPPASDSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAA--------RGIALVAPDTSPRGLNVEGEADSWD 100 (283)
T ss_pred CCceEEEEEcCCcccCCCCCEEEEecCCCcChHHHHHhhhHHHHHhh--------cCeEEEecCCCCCCCCCCCCccccc
Confidence 56777777665422 23568999999999988777543 233343 799999999887661 110
Q ss_pred -C-------CCCC--------CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceE
Q 020518 96 -I-------EGLD--------PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQL 159 (325)
Q Consensus 96 -~-------~~~~--------~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~l 159 (325)
. .... ..+-.+++.+.+...++.++.+ +++++||||||..|+.++.++|+ +++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~-~~~i~G~S~GG~~a~~~a~~~p~--------~~~~~ 171 (283)
T PLN02442 101 FGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTS-RASIFGHSMGGHGALTIYLKNPD--------KYKSV 171 (283)
T ss_pred cCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCC-ceEEEEEChhHHHHHHHHHhCch--------hEEEE
Confidence 0 0000 0112334444455555556777 89999999999999999999999 99999
Q ss_pred EEEecCC
Q 020518 160 WVLDSVP 166 (325)
Q Consensus 160 vli~~~~ 166 (325)
+.+++..
T Consensus 172 ~~~~~~~ 178 (283)
T PLN02442 172 SAFAPIA 178 (283)
T ss_pred EEECCcc
Confidence 9988764
No 75
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.76 E-value=5.2e-17 Score=133.88 Aligned_cols=272 Identities=13% Similarity=0.128 Sum_probs=143.0
Q ss_pred ccccccceEEEEcccCCC-----CCCCceEEEecCCCCCCCC-hH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSD-----RPYTSTAFVLHGLLGSGRN-WR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~-----~~~~~~vv~~HG~~~~~~~-~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
.+.||..+.+....++.. ....|.||++||+.+++.. |- .++..+.+ +||+|+.++.||+|.|.-
T Consensus 99 ~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~--------~G~r~VVfN~RG~~g~~L 170 (409)
T KOG1838|consen 99 KTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQR--------KGYRVVVFNHRGLGGSKL 170 (409)
T ss_pred EeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHh--------CCcEEEEECCCCCCCCcc
Confidence 446788888887644322 2467999999999776643 32 34444444 899999999999999987
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC-Cc
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE-NS 174 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~-~~ 174 (325)
...--..+...+..+.+.+.+++.-++.+...+|.||||.+.+.|..+..+ +...+.++.+++|.-...... ..
T Consensus 171 tTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~-----~~~l~~a~~v~~Pwd~~~~~~~~~ 245 (409)
T KOG1838|consen 171 TTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGD-----NTPLIAAVAVCNPWDLLAASRSIE 245 (409)
T ss_pred CCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccC-----CCCceeEEEEeccchhhhhhhHHh
Confidence 653112223333333344444444555589999999999999999998766 222445555555542110000 00
Q ss_pred hhHHHHHHHHhhcC--CC-CCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc
Q 020518 175 EGEVEKVLQTLQSL--PS-SIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL 251 (325)
Q Consensus 175 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (325)
..........+... .. ....+..+.+.... .+.+.+...............-.+......|+.......+
T Consensus 246 ~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd-------~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~~~v 318 (409)
T KOG1838|consen 246 TPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVD-------FDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSSNYV 318 (409)
T ss_pred cccchHHHHHHHHHhHHHHHhhhhhhhhhccch-------hhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchhhhc
Confidence 00000000000000 00 00000000000000 0000000000000000111112222333445555666677
Q ss_pred cCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC----hHHHHHH-HHHHHh
Q 020518 252 EHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN----PKGLLEI-VAPRIA 323 (325)
Q Consensus 252 ~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~----p~~~~~~-i~~fl~ 323 (325)
+.++ +|+++|.+.+|+++++.....- ....+ |++-+++-..+||..++|. +....+. +.+|+.
T Consensus 319 ~~I~--VP~L~ina~DDPv~p~~~ip~~-~~~~n------p~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ef~~ 386 (409)
T KOG1838|consen 319 DKIK--VPLLCINAADDPVVPEEAIPID-DIKSN------PNVLLVITSHGGHLGFLEGLWPSARTWMDKLLVEFLG 386 (409)
T ss_pred cccc--ccEEEEecCCCCCCCcccCCHH-HHhcC------CcEEEEEeCCCceeeeeccCCCccchhHHHHHHHHHH
Confidence 7776 8999999999999988644222 12222 2478888888899999986 2333333 666654
No 76
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.75 E-value=9.8e-18 Score=124.20 Aligned_cols=217 Identities=16% Similarity=0.180 Sum_probs=143.6
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
+|..+++-...-+ ..+.|+++.+||..++.....+.+.-+-.. -+.+|+.+++||+|.|...+. ...
T Consensus 62 ~D~vtL~a~~~~~---E~S~pTlLyfh~NAGNmGhr~~i~~~fy~~-------l~mnv~ivsYRGYG~S~Gsps---E~G 128 (300)
T KOG4391|consen 62 RDKVTLDAYLMLS---ESSRPTLLYFHANAGNMGHRLPIARVFYVN-------LKMNVLIVSYRGYGKSEGSPS---EEG 128 (300)
T ss_pred CcceeEeeeeecc---cCCCceEEEEccCCCcccchhhHHHHHHHH-------cCceEEEEEeeccccCCCCcc---ccc
Confidence 3455555444332 247899999999999999988888877765 478999999999999998763 333
Q ss_pred HHHHHHHHHHHHHH---hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 105 IANAANDLANLVKA---KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 105 ~~~~~~~l~~~l~~---~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
+.-.++.+.+.+-. ++.. ++++.|-|+||++|..+|+++.+ ++.++|+-++...... ..
T Consensus 129 L~lDs~avldyl~t~~~~dkt-kivlfGrSlGGAvai~lask~~~--------ri~~~ivENTF~SIp~---------~~ 190 (300)
T KOG4391|consen 129 LKLDSEAVLDYLMTRPDLDKT-KIVLFGRSLGGAVAIHLASKNSD--------RISAIIVENTFLSIPH---------MA 190 (300)
T ss_pred eeccHHHHHHHHhcCccCCcc-eEEEEecccCCeeEEEeeccchh--------heeeeeeechhccchh---------hh
Confidence 33333333333321 1334 89999999999999999999998 9999999887643210 00
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
...+...+ .+-+..|..+ ..+.++ ..+. ...+|.|
T Consensus 191 i~~v~p~~------------------~k~i~~lc~k-------------------n~~~S~------~ki~--~~~~P~L 225 (300)
T KOG4391|consen 191 IPLVFPFP------------------MKYIPLLCYK-------------------NKWLSY------RKIG--QCRMPFL 225 (300)
T ss_pred hheeccch------------------hhHHHHHHHH-------------------hhhcch------hhhc--cccCceE
Confidence 00000000 0000011110 001111 1111 2348999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+|.|.+|..+||...+.+.++.+... .++..+|++.|.-.+- -+-..++|.+||..
T Consensus 226 FiSGlkDelVPP~~Mr~Ly~~c~S~~------Krl~eFP~gtHNDT~i-~dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 226 FISGLKDELVPPVMMRQLYELCPSRT------KRLAEFPDGTHNDTWI-CDGYFQAIEDFLAE 281 (300)
T ss_pred EeecCccccCCcHHHHHHHHhCchhh------hhheeCCCCccCceEE-eccHHHHHHHHHHH
Confidence 99999999999999888888887633 6899999999976554 26677888888864
No 77
>PLN00021 chlorophyllase
Probab=99.74 E-value=4.8e-16 Score=128.18 Aligned_cols=122 Identities=22% Similarity=0.178 Sum_probs=83.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA 108 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 108 (325)
.+.+..+.+. .....|+|||+||++.+...|..+++.|++ .||.|+++|++|++.+.... ...+..+.
T Consensus 38 ~~p~~v~~P~-~~g~~PvVv~lHG~~~~~~~y~~l~~~Las--------~G~~VvapD~~g~~~~~~~~---~i~d~~~~ 105 (313)
T PLN00021 38 PKPLLVATPS-EAGTYPVLLFLHGYLLYNSFYSQLLQHIAS--------HGFIVVAPQLYTLAGPDGTD---EIKDAAAV 105 (313)
T ss_pred CceEEEEeCC-CCCCCCEEEEECCCCCCcccHHHHHHHHHh--------CCCEEEEecCCCcCCCCchh---hHHHHHHH
Confidence 3444444442 224578999999999999999999999987 79999999999975332111 11122223
Q ss_pred HHHHHHHHHH-------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVKA-------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~~-------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+.+.+.++. .+.+ +++++||||||.+++.+|.++++... ..+++++|++++..
T Consensus 106 ~~~l~~~l~~~l~~~~~~d~~-~v~l~GHS~GG~iA~~lA~~~~~~~~---~~~v~ali~ldPv~ 166 (313)
T PLN00021 106 INWLSSGLAAVLPEGVRPDLS-KLALAGHSRGGKTAFALALGKAAVSL---PLKFSALIGLDPVD 166 (313)
T ss_pred HHHHHhhhhhhcccccccChh-heEEEEECcchHHHHHHHhhcccccc---ccceeeEEeecccc
Confidence 3333332222 2345 89999999999999999999885111 12689999998864
No 78
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.73 E-value=1.4e-16 Score=127.41 Aligned_cols=105 Identities=25% Similarity=0.391 Sum_probs=88.3
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCc-eEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSE-WRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
++|+|+|+.+++...|..+++.|. .. +.|++++.+|.+.... ...+++++++.+.+.|.....++
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~---------~~~~~v~~i~~~~~~~~~~-----~~~si~~la~~y~~~I~~~~~~g 66 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALP---------DDVIGVYGIEYPGRGDDEP-----PPDSIEELASRYAEAIRARQPEG 66 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHT---------TTEEEEEEECSTTSCTTSH-----EESSHHHHHHHHHHHHHHHTSSS
T ss_pred CeEEEEcCCccCHHHHHHHHHhCC---------CCeEEEEEEecCCCCCCCC-----CCCCHHHHHHHHHHHhhhhCCCC
Confidence 479999999999999999999998 54 8999999999994333 46799999999999998887776
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
+++|+|||+||.+|+++|.+--+. ...|..++++|+.++.
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~-----G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEA-----GEEVSRLILIDSPPPS 106 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHT-----T-SESEEEEESCSSTT
T ss_pred CeeehccCccHHHHHHHHHHHHHh-----hhccCceEEecCCCCC
Confidence 999999999999999999875441 1269999999976543
No 79
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.73 E-value=6.9e-17 Score=136.96 Aligned_cols=109 Identities=20% Similarity=0.233 Sum_probs=84.0
Q ss_pred CCCCceEEEecCCCCCC--CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG--RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
++++|++|++|||+++. ..|.. +...|.... .+|+||++|++|+|.|..+.. ......+++++.++++
T Consensus 38 n~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~------~d~nVI~VDw~g~g~s~y~~a---~~~t~~vg~~la~lI~ 108 (442)
T TIGR03230 38 NHETKTFIVIHGWTVTGMFESWVPKLVAALYERE------PSANVIVVDWLSRAQQHYPTS---AAYTKLVGKDVAKFVN 108 (442)
T ss_pred CCCCCeEEEECCCCcCCcchhhHHHHHHHHHhcc------CCCEEEEEECCCcCCCCCccc---cccHHHHHHHHHHHHH
Confidence 34689999999998754 34654 444443211 369999999999998876542 2334677777777777
Q ss_pred Hh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 118 AK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 118 ~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+ +++ +++||||||||.+|..++.++|+ +|.++++++|+.+
T Consensus 109 ~L~~~~gl~l~-~VhLIGHSLGAhIAg~ag~~~p~--------rV~rItgLDPAgP 155 (442)
T TIGR03230 109 WMQEEFNYPWD-NVHLLGYSLGAHVAGIAGSLTKH--------KVNRITGLDPAGP 155 (442)
T ss_pred HHHHhhCCCCC-cEEEEEECHHHHHHHHHHHhCCc--------ceeEEEEEcCCCC
Confidence 54 367 99999999999999999999998 9999999999754
No 80
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.71 E-value=9e-16 Score=138.84 Aligned_cols=230 Identities=16% Similarity=0.126 Sum_probs=143.3
Q ss_pred ccccceEEEEcccCCCCCCC--ceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC---C--CC
Q 020518 25 RSLQTLAYEEVRSSSDRPYT--STAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR---S--AE 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~--~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~---S--~~ 95 (325)
.+|.++....+.+.+.++.+ |.||++||.+..... |......|+. +||.|+.+++||.+. . ..
T Consensus 373 ~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~--------~G~~V~~~n~RGS~GyG~~F~~~ 444 (620)
T COG1506 373 NDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLAS--------AGYAVLAPNYRGSTGYGREFADA 444 (620)
T ss_pred CCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhc--------CCeEEEEeCCCCCCccHHHHHHh
Confidence 46889999888876554443 889999999876554 5566777776 999999999997543 2 11
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTE 172 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~ 172 (325)
..........+++.+.+. ++.+.+ .+ ++.+.|||+||.+++..+...|. +++.+...+.....
T Consensus 445 ~~~~~g~~~~~D~~~~~~-~l~~~~~~d~~-ri~i~G~SyGGymtl~~~~~~~~---------f~a~~~~~~~~~~~--- 510 (620)
T COG1506 445 IRGDWGGVDLEDLIAAVD-ALVKLPLVDPE-RIGITGGSYGGYMTLLAATKTPR---------FKAAVAVAGGVDWL--- 510 (620)
T ss_pred hhhccCCccHHHHHHHHH-HHHhCCCcChH-HeEEeccChHHHHHHHHHhcCch---------hheEEeccCcchhh---
Confidence 111013446777777777 665554 34 89999999999999999998874 66665555432110
Q ss_pred CchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 173 NSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
....... ..+.....+...... . +... +..........
T Consensus 511 ----------~~~~~~~---------------~~~~~~~~~~~~~~~--------~--~~~~-------~~~~sp~~~~~ 548 (620)
T COG1506 511 ----------LYFGEST---------------EGLRFDPEENGGGPP--------E--DREK-------YEDRSPIFYAD 548 (620)
T ss_pred ----------hhccccc---------------hhhcCCHHHhCCCcc--------c--ChHH-------HHhcChhhhhc
Confidence 0000000 000000000000000 0 0000 11111112233
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
+++ +|+|+|||..|+.++.+.+..+.+.+...+. +++++++|+.||.+-- ++-..+.+.+.+|+++
T Consensus 549 ~i~--~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~----~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~ 615 (620)
T COG1506 549 NIK--TPLLLIHGEEDDRVPIEQAEQLVDALKRKGK----PVELVVFPDEGHGFSRPENRVKVLKEILDWFKR 615 (620)
T ss_pred ccC--CCEEEEeecCCccCChHHHHHHHHHHHHcCc----eEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHH
Confidence 444 8999999999999999999888888877554 4999999999999876 4455566666677653
No 81
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.70 E-value=4.5e-16 Score=122.92 Aligned_cols=198 Identities=17% Similarity=0.137 Sum_probs=115.4
Q ss_pred hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeCh
Q 020518 60 WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSM 132 (325)
Q Consensus 60 ~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~ 132 (325)
|......|++ +||.|+.+|+||.+........ .....-...++|+.+.++.+ +.+ ++.++|||+
T Consensus 3 f~~~~~~la~--------~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~-ri~i~G~S~ 73 (213)
T PF00326_consen 3 FNWNAQLLAS--------QGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPD-RIGIMGHSY 73 (213)
T ss_dssp -SHHHHHHHT--------TT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEE-EEEEEEETH
T ss_pred eeHHHHHHHh--------CCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccce-eEEEEcccc
Confidence 3455566766 8999999999998743211000 01112233444444444433 345 899999999
Q ss_pred hHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHH
Q 020518 133 GGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLS 212 (325)
Q Consensus 133 Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (325)
||.+++.++.++|+ ++++++..++.............+.. ...........
T Consensus 74 GG~~a~~~~~~~~~--------~f~a~v~~~g~~d~~~~~~~~~~~~~-------------------~~~~~~~~~~~-- 124 (213)
T PF00326_consen 74 GGYLALLAATQHPD--------RFKAAVAGAGVSDLFSYYGTTDIYTK-------------------AEYLEYGDPWD-- 124 (213)
T ss_dssp HHHHHHHHHHHTCC--------GSSEEEEESE-SSTTCSBHHTCCHHH-------------------GHHHHHSSTTT--
T ss_pred cccccchhhcccce--------eeeeeeccceecchhccccccccccc-------------------ccccccCccch--
Confidence 99999999999999 99999998886543321100000000 00000000000
Q ss_pred HHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCC
Q 020518 213 EWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEG 292 (325)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~ 292 (325)
....+.... .+ ..+..+..++|+|+++|++|..+++.....+.+.+...+.
T Consensus 125 ------------------~~~~~~~~s-~~------~~~~~~~~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~---- 175 (213)
T PF00326_consen 125 ------------------NPEFYRELS-PI------SPADNVQIKPPVLIIHGENDPRVPPSQSLRLYNALRKAGK---- 175 (213)
T ss_dssp ------------------SHHHHHHHH-HG------GGGGGCGGGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS----
T ss_pred ------------------hhhhhhhhc-cc------cccccccCCCCEEEEccCCCCccCHHHHHHHHHHHHhcCC----
Confidence 000000000 00 0111100237999999999999999998888888887655
Q ss_pred ceeEEEecCCCcccc-ccChHHHHHHHHHHHhc
Q 020518 293 KVSVHVLPNAGHWVH-VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 293 ~~~~~~~~~~gH~~~-~e~p~~~~~~i~~fl~~ 324 (325)
+++++++|++||.+. .+...+..+.+.+||+.
T Consensus 176 ~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~ 208 (213)
T PF00326_consen 176 PVELLIFPGEGHGFGNPENRRDWYERILDFFDK 208 (213)
T ss_dssp SEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHH
Confidence 399999999999554 34556788888888864
No 82
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.68 E-value=3.5e-15 Score=117.81 Aligned_cols=183 Identities=16% Similarity=0.117 Sum_probs=110.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC------CCC---CCCCC---CCCC---CCCHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN------HGR---SAEIE---GLDP---PHDIA 106 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G------~G~---S~~~~---~~~~---~~~~~ 106 (325)
+..+.|||+||+|++...|..... +.... .+.++++++-|- .|. +-.+. .... ...+.
T Consensus 12 ~~~~lvi~LHG~G~~~~~~~~~~~-~~~~~------~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~ 84 (216)
T PF02230_consen 12 KAKPLVILLHGYGDSEDLFALLAE-LNLAL------PNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIE 84 (216)
T ss_dssp T-SEEEEEE--TTS-HHHHHHHHH-HHTCS------TTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHH
T ss_pred CCceEEEEECCCCCCcchhHHHHh-hcccC------CceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHH
Confidence 568899999999998855554433 11112 677888776542 122 11110 0001 12244
Q ss_pred HHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 107 NAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 107 ~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
+.++.+.++++.. ..+ ++++.|+|.||++|+.++.++|+ .+.++|.+++.......
T Consensus 85 ~s~~~l~~li~~~~~~~i~~~-ri~l~GFSQGa~~al~~~l~~p~--------~~~gvv~lsG~~~~~~~---------- 145 (216)
T PF02230_consen 85 ESAERLDELIDEEVAYGIDPS-RIFLGGFSQGAAMALYLALRYPE--------PLAGVVALSGYLPPESE---------- 145 (216)
T ss_dssp HHHHHHHHHHHHHHHTT--GG-GEEEEEETHHHHHHHHHHHCTSS--------TSSEEEEES---TTGCC----------
T ss_pred HHHHHHHHHHHHHHHcCCChh-heehhhhhhHHHHHHHHHHHcCc--------CcCEEEEeecccccccc----------
Confidence 4455566666543 334 89999999999999999999999 99999999976322100
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIA 261 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l 261 (325)
......... ++|++
T Consensus 146 -----------------------------------------------------------------~~~~~~~~~-~~pi~ 159 (216)
T PF02230_consen 146 -----------------------------------------------------------------LEDRPEALA-KTPIL 159 (216)
T ss_dssp -----------------------------------------------------------------CHCCHCCCC-TS-EE
T ss_pred -----------------------------------------------------------------ccccccccC-CCcEE
Confidence 000001111 37999
Q ss_pred EEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 262 IVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 262 ~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+++|.+|+++|.+..+...+.+..... ++++..+++.||.+. .+..+.+.+||+.
T Consensus 160 ~~hG~~D~vvp~~~~~~~~~~L~~~~~----~v~~~~~~g~gH~i~----~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 160 IIHGDEDPVVPFEWAEKTAEFLKAAGA----NVEFHEYPGGGHEIS----PEELRDLREFLEK 214 (216)
T ss_dssp EEEETT-SSSTHHHHHHHHHHHHCTT-----GEEEEEETT-SSS------HHHHHHHHHHHHH
T ss_pred EEecCCCCcccHHHHHHHHHHHHhcCC----CEEEEEcCCCCCCCC----HHHHHHHHHHHhh
Confidence 999999999999989888888887665 499999999999885 4556667777754
No 83
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.66 E-value=5.3e-16 Score=126.21 Aligned_cols=107 Identities=21% Similarity=0.293 Sum_probs=80.0
Q ss_pred CCceEEEecCCCCCC-CChHHH-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 43 YTSTAFVLHGLLGSG-RNWRSF-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~-~~~~~~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
++|++|++|||+++. ..|... ...+... .+|+|+++|+++++.+..+. ...+...+++++..+++.+
T Consensus 35 ~~p~vilIHG~~~~~~~~~~~~l~~~ll~~-------~~~nVi~vD~~~~~~~~y~~---a~~~~~~v~~~la~~l~~L~ 104 (275)
T cd00707 35 SRPTRFIIHGWTSSGEESWISDLRKAYLSR-------GDYNVIVVDWGRGANPNYPQ---AVNNTRVVGAELAKFLDFLV 104 (275)
T ss_pred CCCcEEEEcCCCCCCCCcHHHHHHHHHHhc-------CCCEEEEEECccccccChHH---HHHhHHHHHHHHHHHHHHHH
Confidence 488999999999987 677654 4444431 57999999999984332221 2345555666666666554
Q ss_pred -----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 120 -----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 120 -----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
+.+ ++++|||||||.+|..++.++|+ +|.++++++|+...
T Consensus 105 ~~~g~~~~-~i~lIGhSlGa~vAg~~a~~~~~--------~v~~iv~LDPa~p~ 149 (275)
T cd00707 105 DNTGLSLE-NVHLIGHSLGAHVAGFAGKRLNG--------KLGRITGLDPAGPL 149 (275)
T ss_pred HhcCCChH-HEEEEEecHHHHHHHHHHHHhcC--------ccceeEEecCCccc
Confidence 346 89999999999999999999998 99999999987543
No 84
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.65 E-value=3.1e-14 Score=112.10 Aligned_cols=109 Identities=11% Similarity=0.059 Sum_probs=72.8
Q ss_pred CCCceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-------CCCCCHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-------DPPHDIANAAND 111 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~ 111 (325)
...|.||++||.+++...|. .+...+.+ .||.|+++|.+|++.+...... .......++.+.
T Consensus 11 ~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~--------~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (212)
T TIGR01840 11 GPRALVLALHGCGQTASAYVIDWGWKAAADR--------YGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQL 82 (212)
T ss_pred CCCCEEEEeCCCCCCHHHHhhhcChHHHHHh--------CCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHH
Confidence 35789999999998876664 23333333 7999999999998754321100 001112222222
Q ss_pred HHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 112 LANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 112 l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..+.++.+++ .+++|+|||+||.+++.++.++|+ ++.+++.+++.+
T Consensus 83 i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~--------~~~~~~~~~g~~ 130 (212)
T TIGR01840 83 IDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPD--------VFAGGASNAGLP 130 (212)
T ss_pred HHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCch--------hheEEEeecCCc
Confidence 23333333332 289999999999999999999999 999998888764
No 85
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.64 E-value=1.2e-13 Score=119.62 Aligned_cols=119 Identities=13% Similarity=0.156 Sum_probs=92.9
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCCCCCCCh-----HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNW-----RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
.+..+.|.+..+...++|||+++.+-.....| ..+++.|.+ +||.|+.+|+++-+.+. ...
T Consensus 200 l~eLiqY~P~te~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~--------qG~~VflIsW~nP~~~~------r~~ 265 (560)
T TIGR01839 200 VLELIQYKPITEQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLK--------NQLQVFIISWRNPDKAH------REW 265 (560)
T ss_pred ceEEEEeCCCCCCcCCCcEEEechhhhhhheeecCCcchHHHHHHH--------cCCeEEEEeCCCCChhh------cCC
Confidence 34445555543445678999999998766666 478999988 99999999999866553 367
Q ss_pred CHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHH----HHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 104 DIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALH----FAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~----~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
+++++++.+.+.++.. |.+ +++++|||+||.+++. +++++++ .+|++++++.+.....
T Consensus 266 ~ldDYv~~i~~Ald~V~~~tG~~-~vnl~GyC~GGtl~a~~~a~~aA~~~~-------~~V~sltllatplDf~ 331 (560)
T TIGR01839 266 GLSTYVDALKEAVDAVRAITGSR-DLNLLGACAGGLTCAALVGHLQALGQL-------RKVNSLTYLVSLLDST 331 (560)
T ss_pred CHHHHHHHHHHHHHHHHHhcCCC-CeeEEEECcchHHHHHHHHHHHhcCCC-------CceeeEEeeecccccC
Confidence 8899988877777665 556 9999999999999997 7888874 2799999999876543
No 86
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.64 E-value=3.1e-14 Score=114.24 Aligned_cols=125 Identities=17% Similarity=0.214 Sum_probs=103.6
Q ss_pred ccccceEEEEcccCCCC--CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCC--ceEEEEeCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS--EWRMVLVDLRNHGRSAEIEGLD 100 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~vi~~D~~G~G~S~~~~~~~ 100 (325)
..|-++||....++... ..-.||+++|||+++-..|..+++.|...-.. +... -|.||++.+||+|-|+.+..
T Consensus 131 IeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~h-g~~~d~~FEVI~PSlPGygwSd~~sk-- 207 (469)
T KOG2565|consen 131 IEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRH-GNESDYAFEVIAPSLPGYGWSDAPSK-- 207 (469)
T ss_pred hcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCcccc-CCccceeEEEeccCCCCcccCcCCcc--
Confidence 36889999988765332 23357999999999999999999999863210 1001 27899999999999999886
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
......+.|.-++.++-.+|.+ ++.+-|-.||+.|+..+|..+|+ .|.++=+
T Consensus 208 ~GFn~~a~ArvmrkLMlRLg~n-kffiqGgDwGSiI~snlasLyPe--------nV~GlHl 259 (469)
T KOG2565|consen 208 TGFNAAATARVMRKLMLRLGYN-KFFIQGGDWGSIIGSNLASLYPE--------NVLGLHL 259 (469)
T ss_pred CCccHHHHHHHHHHHHHHhCcc-eeEeecCchHHHHHHHHHhhcch--------hhhHhhh
Confidence 7889999999999999999999 99999999999999999999999 7776544
No 87
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.60 E-value=2.2e-13 Score=99.72 Aligned_cols=179 Identities=17% Similarity=0.182 Sum_probs=119.8
Q ss_pred CCCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 41 RPYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
.+..|..|.+|--+....+ ..+++..++..+.+ .||.++.+|+||-|.|....+ ....-.+.+....++++..
T Consensus 25 ~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~----~G~atlRfNfRgVG~S~G~fD--~GiGE~~Da~aaldW~~~~ 98 (210)
T COG2945 25 TPAAPIALICHPHPLFGGTMNNKVVQTLARALVK----RGFATLRFNFRGVGRSQGEFD--NGIGELEDAAAALDWLQAR 98 (210)
T ss_pred CCCCceEEecCCCccccCccCCHHHHHHHHHHHh----CCceEEeecccccccccCccc--CCcchHHHHHHHHHHHHhh
Confidence 4567888999876543322 23344444333333 899999999999999998764 3444455566667777776
Q ss_pred CCCCCE-EEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHH
Q 020518 120 GWDWPD-VVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWL 198 (325)
Q Consensus 120 ~~~~~~-~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (325)
..+.+. .+.|+|+|+.|++.+|.+.|+ ....+.+.+.....
T Consensus 99 hp~s~~~~l~GfSFGa~Ia~~la~r~~e---------~~~~is~~p~~~~~----------------------------- 140 (210)
T COG2945 99 HPDSASCWLAGFSFGAYIAMQLAMRRPE---------ILVFISILPPINAY----------------------------- 140 (210)
T ss_pred CCCchhhhhcccchHHHHHHHHHHhccc---------ccceeeccCCCCch-----------------------------
Confidence 655233 588999999999999999887 33333333322100
Q ss_pred HHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHH
Q 020518 199 VNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQR 278 (325)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~ 278 (325)
++ ..+. +.++|.++|+|+.|+++++...-.
T Consensus 141 -----------------------------------------------df-s~l~--P~P~~~lvi~g~~Ddvv~l~~~l~ 170 (210)
T COG2945 141 -----------------------------------------------DF-SFLA--PCPSPGLVIQGDADDVVDLVAVLK 170 (210)
T ss_pred -----------------------------------------------hh-hhcc--CCCCCceeEecChhhhhcHHHHHH
Confidence 00 0001 223688999999999988865544
Q ss_pred HHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 279 LEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+++- .+ .+++++++++||++- +-+.+.+.|.+||.
T Consensus 171 ~~~~---~~------~~~i~i~~a~HFF~g-Kl~~l~~~i~~~l~ 205 (210)
T COG2945 171 WQES---IK------ITVITIPGADHFFHG-KLIELRDTIADFLE 205 (210)
T ss_pred hhcC---CC------CceEEecCCCceecc-cHHHHHHHHHHHhh
Confidence 4433 11 789999999999875 46788999999983
No 88
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.60 E-value=1.4e-13 Score=123.46 Aligned_cols=123 Identities=15% Similarity=0.015 Sum_probs=92.7
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCC---ChH-HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NWR-SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~~-~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~ 99 (325)
+.+|.+|++..+.+.. ....|+||++||++.+.. .+. .....|.+ +||.|+++|+||+|.|.....
T Consensus 3 ~~DG~~L~~~~~~P~~-~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~--------~Gy~vv~~D~RG~g~S~g~~~- 72 (550)
T TIGR00976 3 MRDGTRLAIDVYRPAG-GGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVA--------QGYAVVIQDTRGRGASEGEFD- 72 (550)
T ss_pred CCCCCEEEEEEEecCC-CCCCCEEEEecCCCCchhhccccccccHHHHHh--------CCcEEEEEeccccccCCCceE-
Confidence 4688899988776642 235789999999987653 222 23455665 899999999999999987542
Q ss_pred CCCCCHHHHHHHHHHHHHHhCC----CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 100 DPPHDIANAANDLANLVKAKGW----DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.++ ...++|+.++++.+.. +.++.++|||+||.+++.+|.++|+ +++++|..++...
T Consensus 73 --~~~-~~~~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~--------~l~aiv~~~~~~d 133 (550)
T TIGR00976 73 --LLG-SDEAADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPP--------ALRAIAPQEGVWD 133 (550)
T ss_pred --ecC-cccchHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCC--------ceeEEeecCcccc
Confidence 222 4566777777665521 2389999999999999999999998 8999999887643
No 89
>PRK10162 acetyl esterase; Provisional
Probab=99.59 E-value=9.4e-13 Score=109.99 Aligned_cols=234 Identities=15% Similarity=0.005 Sum_probs=129.3
Q ss_pred ceEEEEcccCCCCCCCceEEEecCCC---CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH
Q 020518 29 TLAYEEVRSSSDRPYTSTAFVLHGLL---GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI 105 (325)
Q Consensus 29 ~l~y~~~~~~~~~~~~~~vv~~HG~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~ 105 (325)
.+..+.+.+.. ...|.||++||.+ ++...|..++..|+.. .|+.|+++|+|....... ...+
T Consensus 68 ~i~~~~y~P~~--~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~Vv~vdYrlape~~~------p~~~ 132 (318)
T PRK10162 68 QVETRLYYPQP--DSQATLFYLHGGGFILGNLDTHDRIMRLLASY-------SGCTVIGIDYTLSPEARF------PQAI 132 (318)
T ss_pred ceEEEEECCCC--CCCCEEEEEeCCcccCCCchhhhHHHHHHHHH-------cCCEEEEecCCCCCCCCC------CCcH
Confidence 35555555532 3468899999976 4556788888888863 489999999996543322 2233
Q ss_pred HHH---HHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHH
Q 020518 106 ANA---ANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKV 181 (325)
Q Consensus 106 ~~~---~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~ 181 (325)
++. .+.+.+..++++++ .+++|+|+|+||.+++.++.+..+... ...++.+++++.+....... . .
T Consensus 133 ~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~--~~~~~~~~vl~~p~~~~~~~---~---s-- 202 (318)
T PRK10162 133 EEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQI--DCGKVAGVLLWYGLYGLRDS---V---S-- 202 (318)
T ss_pred HHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCC--CccChhheEEECCccCCCCC---h---h--
Confidence 443 33344444456542 289999999999999999986532100 01278999999876432110 0 0
Q ss_pred HHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccc-cCCCCCCcE
Q 020518 182 LQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLL-EHPPQGMEI 260 (325)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~P~ 260 (325)
...... ....... ...+++...+...... ..++ +.. .....+ ..+ -|+
T Consensus 203 ~~~~~~-~~~~l~~--------------~~~~~~~~~y~~~~~~---~~~p---------~~~-p~~~~l~~~l---Pp~ 251 (318)
T PRK10162 203 RRLLGG-VWDGLTQ--------------QDLQMYEEAYLSNDAD---RESP---------YYC-LFNNDLTRDV---PPC 251 (318)
T ss_pred HHHhCC-CccccCH--------------HHHHHHHHHhCCCccc---cCCc---------ccC-cchhhhhcCC---CCe
Confidence 000000 0000000 0011111111100000 0000 000 000112 122 388
Q ss_pred EEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-----ChHHHHHHHHHHHhc
Q 020518 261 AIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-----NPKGLLEIVAPRIAS 324 (325)
Q Consensus 261 l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl~~ 324 (325)
++++|+.|...+ ....+.+.+...+. ++++++++|..|.+..- ...+..+.+.+||+.
T Consensus 252 ~i~~g~~D~L~d--e~~~~~~~L~~aGv----~v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 252 FIAGAEFDPLLD--DSRLLYQTLAAHQQ----PCEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred EEEecCCCcCcC--hHHHHHHHHHHcCC----CEEEEEECCCceehhhccCchHHHHHHHHHHHHHHHH
Confidence 999999998764 35566666666554 39999999999976532 234566677777753
No 90
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.59 E-value=9.1e-14 Score=104.24 Aligned_cols=156 Identities=16% Similarity=0.292 Sum_probs=98.1
Q ss_pred EEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 47 AFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 47 vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
|+++||++++. .+|.+....-.+ ..++|-.+++ ...+.+++...+.+.+.... + ++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~--------~~~~V~~~~~-------------~~P~~~~W~~~l~~~i~~~~-~-~~ 57 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLE--------NSVRVEQPDW-------------DNPDLDEWVQALDQAIDAID-E-PT 57 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHT--------TSEEEEEC---------------TS--HHHHHHHHHHCCHC-T-T-TE
T ss_pred CEEeCCCCCCCccHHHHHHHHhCC--------CCeEEecccc-------------CCCCHHHHHHHHHHHHhhcC-C-Ce
Confidence 68999998875 677765433332 3367777666 13367888888888887653 4 79
Q ss_pred EEEEeChhHHHHHHHH-HHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHh
Q 020518 126 VVIGHSMGGKVALHFA-QSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMME 204 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a-~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (325)
++||||+|+..++.++ ..... +|.+++|++++.......
T Consensus 58 ilVaHSLGc~~~l~~l~~~~~~--------~v~g~lLVAp~~~~~~~~-------------------------------- 97 (171)
T PF06821_consen 58 ILVAHSLGCLTALRWLAEQSQK--------KVAGALLVAPFDPDDPEP-------------------------------- 97 (171)
T ss_dssp EEEEETHHHHHHHHHHHHTCCS--------SEEEEEEES--SCGCHHC--------------------------------
T ss_pred EEEEeCHHHHHHHHHHhhcccc--------cccEEEEEcCCCcccccc--------------------------------
Confidence 9999999999999999 55555 999999999873210000
Q ss_pred hccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhh
Q 020518 205 LGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLAN 284 (325)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~ 284 (325)
... .+..+. .+...+..+|.++|.+++|++++.+..+.+++.+.
T Consensus 98 --~~~----------------------------~~~~f~------~~p~~~l~~~~~viaS~nDp~vp~~~a~~~A~~l~ 141 (171)
T PF06821_consen 98 --FPP----------------------------ELDGFT------PLPRDPLPFPSIVIASDNDPYVPFERAQRLAQRLG 141 (171)
T ss_dssp --CTC----------------------------GGCCCT------TSHCCHHHCCEEEEEETTBSSS-HHHHHHHHHHHT
T ss_pred --hhh----------------------------hccccc------cCcccccCCCeEEEEcCCCCccCHHHHHHHHHHcC
Confidence 000 000000 00111112567999999999999998888888775
Q ss_pred hcCCCCCCceeEEEecCCCccccccC
Q 020518 285 RQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
++++.++++||+.-.+-
T Consensus 142 ---------a~~~~~~~~GHf~~~~G 158 (171)
T PF06821_consen 142 ---------AELIILGGGGHFNAASG 158 (171)
T ss_dssp ----------EEEEETS-TTSSGGGT
T ss_pred ---------CCeEECCCCCCcccccC
Confidence 79999999999987653
No 91
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.59 E-value=8.1e-14 Score=110.39 Aligned_cols=182 Identities=19% Similarity=0.163 Sum_probs=114.3
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC-CCCCCCCCCCC--------CHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR-SAEIEGLDPPH--------DIANAANDL 112 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-S~~~~~~~~~~--------~~~~~~~~l 112 (325)
.+.|.||++|++.+-....+.+++.|++ .||.|+++|+.+-.. ...... .... ..+...+++
T Consensus 12 ~~~~~Vvv~~d~~G~~~~~~~~ad~lA~--------~Gy~v~~pD~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 82 (218)
T PF01738_consen 12 GPRPAVVVIHDIFGLNPNIRDLADRLAE--------EGYVVLAPDLFGGRGAPPSDPE-EAFAAMRELFAPRPEQVAADL 82 (218)
T ss_dssp SSEEEEEEE-BTTBS-HHHHHHHHHHHH--------TT-EEEEE-CCCCTS--CCCHH-CHHHHHHHCHHHSHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCchHHHHHHHHHHh--------cCCCEEecccccCCCCCccchh-hHHHHHHHHHhhhHHHHHHHH
Confidence 3579999999998877666678888887 899999999864443 111100 0000 134556677
Q ss_pred HHHHHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhh
Q 020518 113 ANLVKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQ 186 (325)
Q Consensus 113 ~~~l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~ 186 (325)
.+.++.+. .+ ++.++|+||||.+++.++.+. + .+++.|..-+.....
T Consensus 83 ~aa~~~l~~~~~~~~~-kig~vGfc~GG~~a~~~a~~~-~--------~~~a~v~~yg~~~~~----------------- 135 (218)
T PF01738_consen 83 QAAVDYLRAQPEVDPG-KIGVVGFCWGGKLALLLAARD-P--------RVDAAVSFYGGSPPP----------------- 135 (218)
T ss_dssp HHHHHHHHCTTTCEEE-EEEEEEETHHHHHHHHHHCCT-T--------TSSEEEEES-SSSGG-----------------
T ss_pred HHHHHHHHhccccCCC-cEEEEEEecchHHhhhhhhhc-c--------ccceEEEEcCCCCCC-----------------
Confidence 66666552 23 899999999999999999887 4 688888776610000
Q ss_pred cCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 187 SLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
........+ ++|+++++|+
T Consensus 136 -----------------------------------------------------------~~~~~~~~~--~~P~l~~~g~ 154 (218)
T PF01738_consen 136 -----------------------------------------------------------PPLEDAPKI--KAPVLILFGE 154 (218)
T ss_dssp -----------------------------------------------------------GHHHHGGG----S-EEEEEET
T ss_pred -----------------------------------------------------------cchhhhccc--CCCEeecCcc
Confidence 000001222 2799999999
Q ss_pred CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh--------HHHHHHHHHHHhc
Q 020518 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP--------KGLLEIVAPRIAS 324 (325)
Q Consensus 267 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p--------~~~~~~i~~fl~~ 324 (325)
+|+.++++..+.+.+.+...+. .+++++++|++|-+..... ++-.+.+.+||++
T Consensus 155 ~D~~~~~~~~~~~~~~l~~~~~----~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~ 216 (218)
T PF01738_consen 155 NDPFFPPEEVEALEEALKAAGV----DVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKR 216 (218)
T ss_dssp T-TTS-HHHHHHHHHHHHCTTT----TEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC
T ss_pred CCCCCChHHHHHHHHHHHhcCC----cEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHh
Confidence 9999999887777777755443 3999999999998876432 3445566677654
No 92
>COG0400 Predicted esterase [General function prediction only]
Probab=99.57 E-value=2.4e-13 Score=104.23 Aligned_cols=175 Identities=19% Similarity=0.186 Sum_probs=120.2
Q ss_pred CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC--CC----CCCCCCCCCCCCCH-------HH
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN--HG----RSAEIEGLDPPHDI-------AN 107 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G--~G----~S~~~~~~~~~~~~-------~~ 107 (325)
.+..|.||++||+|++...+-+....+. .++.++.+.-+= .| .+.... ..++. +.
T Consensus 15 ~p~~~~iilLHG~Ggde~~~~~~~~~~~---------P~~~~is~rG~v~~~g~~~~f~~~~~---~~~d~edl~~~~~~ 82 (207)
T COG0400 15 DPAAPLLILLHGLGGDELDLVPLPELIL---------PNATLVSPRGPVAENGGPRFFRRYDE---GSFDQEDLDLETEK 82 (207)
T ss_pred CCCCcEEEEEecCCCChhhhhhhhhhcC---------CCCeEEcCCCCccccCcccceeecCC---CccchhhHHHHHHH
Confidence 3567789999999998888877544444 566776653210 01 000100 22333 33
Q ss_pred HHHHHHHHHHHhCC--CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 108 AANDLANLVKAKGW--DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 108 ~~~~l~~~l~~~~~--~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+++.+....++.++ + +++++|+|-||++++.+..++|+ .++++|++.+.......
T Consensus 83 ~~~~l~~~~~~~gi~~~-~ii~~GfSqGA~ial~~~l~~~~--------~~~~ail~~g~~~~~~~-------------- 139 (207)
T COG0400 83 LAEFLEELAEEYGIDSS-RIILIGFSQGANIALSLGLTLPG--------LFAGAILFSGMLPLEPE-------------- 139 (207)
T ss_pred HHHHHHHHHHHhCCChh-heEEEecChHHHHHHHHHHhCch--------hhccchhcCCcCCCCCc--------------
Confidence 44445555556666 6 89999999999999999999999 99999999876432210
Q ss_pred hcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEee
Q 020518 186 QSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRA 265 (325)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g 265 (325)
.... ...+|+++++|
T Consensus 140 ----------------------------------------------------------------~~~~-~~~~pill~hG 154 (207)
T COG0400 140 ----------------------------------------------------------------LLPD-LAGTPILLSHG 154 (207)
T ss_pred ----------------------------------------------------------------cccc-cCCCeEEEecc
Confidence 0001 12269999999
Q ss_pred CCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 266 EKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 266 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
..|++++.....++.+.+...+.. +++..++ .||.+.. +..+.+.+|+..
T Consensus 155 ~~Dpvvp~~~~~~l~~~l~~~g~~----v~~~~~~-~GH~i~~----e~~~~~~~wl~~ 204 (207)
T COG0400 155 TEDPVVPLALAEALAEYLTASGAD----VEVRWHE-GGHEIPP----EELEAARSWLAN 204 (207)
T ss_pred CcCCccCHHHHHHHHHHHHHcCCC----EEEEEec-CCCcCCH----HHHHHHHHHHHh
Confidence 999999999999999988886654 8999999 6998854 444555556643
No 93
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.56 E-value=1.4e-14 Score=93.48 Aligned_cols=79 Identities=19% Similarity=0.333 Sum_probs=69.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHH
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIA 106 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~ 106 (325)
|.+|+|+.+.++.+ .+.+|+++||++..+..|..++..|++ .||.|+++|+||||.|..... ...+++
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~ry~~~a~~L~~--------~G~~V~~~D~rGhG~S~g~rg--~~~~~~ 68 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGRYAHLAEFLAE--------QGYAVFAYDHRGHGRSEGKRG--HIDSFD 68 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHHHHHHHHHHHh--------CCCEEEEECCCcCCCCCCccc--ccCCHH
Confidence 56889999887533 588999999999999999999999998 999999999999999997665 567999
Q ss_pred HHHHHHHHHHH
Q 020518 107 NAANDLANLVK 117 (325)
Q Consensus 107 ~~~~~l~~~l~ 117 (325)
++++|+..+++
T Consensus 69 ~~v~D~~~~~~ 79 (79)
T PF12146_consen 69 DYVDDLHQFIQ 79 (79)
T ss_pred HHHHHHHHHhC
Confidence 99999998874
No 94
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.55 E-value=2.4e-13 Score=108.67 Aligned_cols=249 Identities=16% Similarity=0.153 Sum_probs=87.7
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
....||||.|++..- .....++..|.. .+|.++-+-++-....- ...++++.++||.++++.+
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~--------~~wsl~q~~LsSSy~G~------G~~SL~~D~~eI~~~v~yl 97 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEE--------TGWSLFQVQLSSSYSGW------GTSSLDRDVEEIAQLVEYL 97 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT---------TT-EEEEE--GGGBTTS-------S--HHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhcc--------CCeEEEEEEecCccCCc------CcchhhhHHHHHHHHHHHH
Confidence 456899999998754 334556666754 69999999876211110 2457888888888887754
Q ss_pred --------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH---HHHHHHHhhcC
Q 020518 120 --------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE---VEKVLQTLQSL 188 (325)
Q Consensus 120 --------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~---~~~~~~~~~~~ 188 (325)
+.+ +|+|+|||.|+.-+++|+...... .....|++.||-+|............. ..+.+......
T Consensus 98 r~~~~g~~~~~-kIVLmGHSTGcQdvl~Yl~~~~~~---~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~ 173 (303)
T PF08538_consen 98 RSEKGGHFGRE-KIVLMGHSTGCQDVLHYLSSPNPS---PSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKEL 173 (303)
T ss_dssp HHHS------S--EEEEEECCHHHHHHHHHHH-TT------CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHH
T ss_pred HHhhccccCCc-cEEEEecCCCcHHHHHHHhccCcc---ccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHH
Confidence 234 899999999999999999875310 002379999999998765543333222 22222221111
Q ss_pred CCCCCcHHHHHHHHHhhc---cchhHHHHHhhcccCCCcccccccChhHHHHhhhc-ccCCcccccccCCCCCCcEEEEe
Q 020518 189 PSSIPSRKWLVNHMMELG---FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS-YREMSYWPLLEHPPQGMEIAIVR 264 (325)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~l~i~ 264 (325)
.........+...+.... ..-...+|..-. ....-.+++.. +....+...+..+. +|+|++.
T Consensus 174 i~~g~~~~~lp~~~~~~~~~~~PiTA~Rf~SL~------------s~~gdDD~FSSDL~de~l~~tfG~v~--~plLvl~ 239 (303)
T PF08538_consen 174 IAEGKGDEILPREFTPLVFYDTPITAYRFLSLA------------SPGGDDDYFSSDLSDERLKKTFGKVS--KPLLVLY 239 (303)
T ss_dssp HHCT-TT-GG----GGTTT-SS---HHHHHT-S-------------SSHHHHTHHHHHTT-HHHHTGGG----S-EEEEE
T ss_pred HHcCCCCceeeccccccccCCCcccHHHHHhcc------------CCCCcccccCCCCCHHHHHHHhccCC--CceEEEe
Confidence 000000000000000000 001111111111 11122223322 11222333445555 5999999
Q ss_pred eCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCccccccCh----HHHHHHHHHHHh
Q 020518 265 AEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP----KGLLEIVAPRIA 323 (325)
Q Consensus 265 g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p----~~~~~~i~~fl~ 323 (325)
+++|..+|+..- +.+.+.+....+...-...-.++|||+|.+--+.. +.+.+.|..||+
T Consensus 240 Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 240 SGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp E--TT-----------------------------------------------------------
T ss_pred cCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999987432 22222222211100001224589999999875433 358888888874
No 95
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.55 E-value=3.5e-14 Score=127.98 Aligned_cols=111 Identities=19% Similarity=0.174 Sum_probs=85.9
Q ss_pred ccccceEEEEcccCC-----CCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---
Q 020518 25 RSLQTLAYEEVRSSS-----DRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI--- 96 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~-----~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~--- 96 (325)
.++.++.|...+.+. +....|+|||+||++++...|..+++.|.+ .||+|+++|+||||.|...
T Consensus 425 p~~~~i~~~~~~~g~~~~~~p~~g~P~VVllHG~~g~~~~~~~lA~~La~--------~Gy~VIaiDlpGHG~S~~~~~~ 496 (792)
T TIGR03502 425 PNGPVIAAFRAGTGLETFAAPTDGWPVVIYQHGITGAKENALAFAGTLAA--------AGVATIAIDHPLHGARSFDANA 496 (792)
T ss_pred cCcchhhhhhcccccccccCCCCCCcEEEEeCCCCCCHHHHHHHHHHHHh--------CCcEEEEeCCCCCCcccccccc
Confidence 456666666654432 122346899999999999999999999987 7999999999999999443
Q ss_pred ------CCCCC-----------CCCHHHHHHHHHHHHHHhC----------------CCCCEEEEEeChhHHHHHHHHHH
Q 020518 97 ------EGLDP-----------PHDIANAANDLANLVKAKG----------------WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 97 ------~~~~~-----------~~~~~~~~~~l~~~l~~~~----------------~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..... ...+.+.+.|+..+...+. .. +++++||||||+++..++..
T Consensus 497 ~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~-~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 497 SGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGS-KVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCC-cEEEEecCHHHHHHHHHHHh
Confidence 11001 2378999999998888776 23 89999999999999999976
Q ss_pred c
Q 020518 144 C 144 (325)
Q Consensus 144 ~ 144 (325)
.
T Consensus 576 a 576 (792)
T TIGR03502 576 A 576 (792)
T ss_pred c
Confidence 3
No 96
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.54 E-value=1.7e-12 Score=107.39 Aligned_cols=231 Identities=13% Similarity=0.042 Sum_probs=120.8
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCC-CCCCCC------
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGR-SAEIEG------ 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~-S~~~~~------ 98 (325)
+|..++=.-+.+......-|.||.+||.++....|...+. ++. .||.|+++|.||+|. +.....
T Consensus 65 ~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~-~a~--------~G~~vl~~d~rGqg~~~~d~~~~~~~~~ 135 (320)
T PF05448_consen 65 DGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLP-WAA--------AGYAVLAMDVRGQGGRSPDYRGSSGGTL 135 (320)
T ss_dssp GGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHH-HHH--------TT-EEEEE--TTTSSSS-B-SSBSSS-S
T ss_pred CCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccc-ccc--------CCeEEEEecCCCCCCCCCCccccCCCCC
Confidence 3445544444443233557889999999998877776554 444 899999999999993 321110
Q ss_pred -------C---CCCCCHHHHHHHHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEE
Q 020518 99 -------L---DPPHDIANAANDLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL 162 (325)
Q Consensus 99 -------~---~~~~~~~~~~~~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli 162 (325)
. ...+-+..+..|....++.+ +.+ ++.+.|.|.||.+++.+|+..| +|++++..
T Consensus 136 ~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~-rI~v~G~SqGG~lal~~aaLd~---------rv~~~~~~ 205 (320)
T PF05448_consen 136 KGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGK-RIGVTGGSQGGGLALAAAALDP---------RVKAAAAD 205 (320)
T ss_dssp SSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEE-EEEEEEETHHHHHHHHHHHHSS---------T-SEEEEE
T ss_pred ccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcc-eEEEEeecCchHHHHHHHHhCc---------cccEEEec
Confidence 0 01122334445555555543 234 8999999999999999999876 69999998
Q ss_pred ecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcc
Q 020518 163 DSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSY 242 (325)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (325)
.|..... ...+..-. .. .....+..|+...-.. .......+..+
T Consensus 206 vP~l~d~---------~~~~~~~~----~~-------------~~y~~~~~~~~~~d~~----------~~~~~~v~~~L 249 (320)
T PF05448_consen 206 VPFLCDF---------RRALELRA----DE-------------GPYPEIRRYFRWRDPH----------HEREPEVFETL 249 (320)
T ss_dssp SESSSSH---------HHHHHHT------S-------------TTTHHHHHHHHHHSCT----------HCHHHHHHHHH
T ss_pred CCCccch---------hhhhhcCC----cc-------------ccHHHHHHHHhccCCC----------cccHHHHHHHH
Confidence 8765331 11111000 00 0011112222200000 01111122222
Q ss_pred cCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHH-HHHHHHH
Q 020518 243 REMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGL-LEIVAPR 321 (325)
Q Consensus 243 ~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~-~~~i~~f 321 (325)
.-.|......+++ +|+++-.|-.|..+||...-.....+.. ..++.+++..||.. +.++ .+...+|
T Consensus 250 ~Y~D~~nfA~ri~--~pvl~~~gl~D~~cPP~t~fA~yN~i~~-------~K~l~vyp~~~He~----~~~~~~~~~~~~ 316 (320)
T PF05448_consen 250 SYFDAVNFARRIK--CPVLFSVGLQDPVCPPSTQFAAYNAIPG-------PKELVVYPEYGHEY----GPEFQEDKQLNF 316 (320)
T ss_dssp HTT-HHHHGGG----SEEEEEEETT-SSS-HHHHHHHHCC--S-------SEEEEEETT--SST----THHHHHHHHHHH
T ss_pred hhhhHHHHHHHcC--CCEEEEEecCCCCCCchhHHHHHhccCC-------CeeEEeccCcCCCc----hhhHHHHHHHHH
Confidence 2223333445555 8999999999999999776444444432 27999999999955 3444 6677777
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
|..
T Consensus 317 l~~ 319 (320)
T PF05448_consen 317 LKE 319 (320)
T ss_dssp HHH
T ss_pred Hhc
Confidence 753
No 97
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.54 E-value=3.6e-13 Score=102.29 Aligned_cols=226 Identities=15% Similarity=0.146 Sum_probs=112.4
Q ss_pred cccccceEEEEcccCCCCCC-CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPY-TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLDP 101 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~-~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~~ 101 (325)
+.+|..|+.++..|..+.+. .++||+.+||+.....|..++.+|+. .||+|+.+|.-.| |.|+... .
T Consensus 9 ~~~~~~I~vwet~P~~~~~~~~~tiliA~Gf~rrmdh~agLA~YL~~--------NGFhViRyDsl~HvGlSsG~I---~ 77 (294)
T PF02273_consen 9 LEDGRQIRVWETRPKNNEPKRNNTILIAPGFARRMDHFAGLAEYLSA--------NGFHVIRYDSLNHVGLSSGDI---N 77 (294)
T ss_dssp ETTTEEEEEEEE---TTS---S-EEEEE-TT-GGGGGGHHHHHHHHT--------TT--EEEE---B-------------
T ss_pred cCCCCEEEEeccCCCCCCcccCCeEEEecchhHHHHHHHHHHHHHhh--------CCeEEEeccccccccCCCCCh---h
Confidence 45788999998877655443 48999999999999999999999998 9999999998876 8888876 5
Q ss_pred CCCHHHHHHHHHHHHH---HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH
Q 020518 102 PHDIANAANDLANLVK---AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV 178 (325)
Q Consensus 102 ~~~~~~~~~~l~~~l~---~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~ 178 (325)
.+++....+++..+++ ..|.. ++-|+.-|+.|-+|+..|.+- .+.-+|..-+... +
T Consensus 78 eftms~g~~sL~~V~dwl~~~g~~-~~GLIAaSLSaRIAy~Va~~i----------~lsfLitaVGVVn----------l 136 (294)
T PF02273_consen 78 EFTMSIGKASLLTVIDWLATRGIR-RIGLIAASLSARIAYEVAADI----------NLSFLITAVGVVN----------L 136 (294)
T ss_dssp ---HHHHHHHHHHHHHHHHHTT----EEEEEETTHHHHHHHHTTTS------------SEEEEES--S-----------H
T ss_pred hcchHHhHHHHHHHHHHHHhcCCC-cchhhhhhhhHHHHHHHhhcc----------CcceEEEEeeeee----------H
Confidence 7888888887766655 45778 899999999999999999853 3555555544321 1
Q ss_pred HHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc---cccccCCC
Q 020518 179 EKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY---WPLLEHPP 255 (325)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 255 (325)
+..+.. .....+-.. ++. .+.....-.....+...+..-+-.....++ ...++.+
T Consensus 137 r~TLe~-----------------al~~Dyl~~---~i~-~lp~dldfeGh~l~~~vFv~dc~e~~w~~l~ST~~~~k~l- 194 (294)
T PF02273_consen 137 RDTLEK-----------------ALGYDYLQL---PIE-QLPEDLDFEGHNLGAEVFVTDCFEHGWDDLDSTINDMKRL- 194 (294)
T ss_dssp HHHHHH-----------------HHSS-GGGS----GG-G--SEEEETTEEEEHHHHHHHHHHTT-SSHHHHHHHHTT--
T ss_pred HHHHHH-----------------Hhccchhhc---chh-hCCCcccccccccchHHHHHHHHHcCCccchhHHHHHhhC-
Confidence 111111 100000000 000 000000001111111222211111111111 1233344
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP 311 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p 311 (325)
.+|++.+++++|.++....+..+...+.. +.+++..++|++|... |+|
T Consensus 195 -~iP~iaF~A~~D~WV~q~eV~~~~~~~~s------~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 195 -SIPFIAFTANDDDWVKQSEVEELLDNINS------NKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp --S-EEEEEETT-TTS-HHHHHHHHTT-TT--------EEEEEETT-SS-TT-SSH
T ss_pred -CCCEEEEEeCCCccccHHHHHHHHHhcCC------CceeEEEecCccchhh-hCh
Confidence 48999999999999998777666554443 3489999999999875 444
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.54 E-value=4e-12 Score=96.35 Aligned_cols=89 Identities=20% Similarity=0.247 Sum_probs=68.5
Q ss_pred EEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 020518 47 AFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWP 124 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 124 (325)
|+++|||.++..+... +...+.+.. ....++.+|++ .+.++..+.+.+++++...+ .
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~------~~~~~~~p~l~--------------~~p~~a~~~l~~~i~~~~~~-~ 60 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHG------PDIQYPCPDLP--------------PFPEEAIAQLEQLIEELKPE-N 60 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhC------CCceEECCCCC--------------cCHHHHHHHHHHHHHhCCCC-C
Confidence 7999999999988765 344444422 34566666653 56778888999999999877 7
Q ss_pred EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 125 DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.|||.||||..|..+|.+++- ++ ||++|+..
T Consensus 61 ~~liGSSlGG~~A~~La~~~~~----------~a-vLiNPav~ 92 (187)
T PF05728_consen 61 VVLIGSSLGGFYATYLAERYGL----------PA-VLINPAVR 92 (187)
T ss_pred eEEEEEChHHHHHHHHHHHhCC----------CE-EEEcCCCC
Confidence 9999999999999999999853 34 88998753
No 99
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.54 E-value=5.7e-13 Score=105.35 Aligned_cols=104 Identities=21% Similarity=0.246 Sum_probs=90.7
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWP 124 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 124 (325)
|+|+++|+.++....|..+...|. ....|+.++.||++.-.. ...+++++++...+.|.+...+++
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~---------~~~~v~~l~a~g~~~~~~-----~~~~l~~~a~~yv~~Ir~~QP~GP 66 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALG---------PLLPVYGLQAPGYGAGEQ-----PFASLDDMAAAYVAAIRRVQPEGP 66 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhc---------cCceeeccccCccccccc-----ccCCHHHHHHHHHHHHHHhCCCCC
Confidence 589999999999999999999998 568999999999987444 467999999999999999998889
Q ss_pred EEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 125 DVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
++|+|||+||.+|+..|.+--. ....|..++++|+.+.
T Consensus 67 y~L~G~S~GG~vA~evA~qL~~-----~G~~Va~L~llD~~~~ 104 (257)
T COG3319 67 YVLLGWSLGGAVAFEVAAQLEA-----QGEEVAFLGLLDAVPP 104 (257)
T ss_pred EEEEeeccccHHHHHHHHHHHh-----CCCeEEEEEEeccCCC
Confidence 9999999999999999987533 1127999999999876
No 100
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.53 E-value=4e-12 Score=102.91 Aligned_cols=116 Identities=15% Similarity=0.171 Sum_probs=94.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE---GLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~---~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+..++|++|.+|-.+.|..++..|.+.+. ..+.|+++.+.||-.+.... .....++++++++.-.+++++.-
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~-----~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~ 76 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLN-----PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELI 76 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCC-----CCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHh
Confidence 56799999999999999999999997642 78999999999998776651 01268999999999888887653
Q ss_pred -----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 121 -----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 121 -----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+.+++++|||.|+.++++.+.+.++ ...+|.+++++-|+....
T Consensus 77 ~~~~~~~~~liLiGHSIGayi~levl~r~~~-----~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 77 PQKNKPNVKLILIGHSIGAYIALEVLKRLPD-----LKFRVKKVILLFPTIEDI 125 (266)
T ss_pred hhhcCCCCcEEEEeCcHHHHHHHHHHHhccc-----cCCceeEEEEeCCccccc
Confidence 33479999999999999999999991 012899999999875444
No 101
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.51 E-value=2.2e-12 Score=107.66 Aligned_cols=105 Identities=19% Similarity=0.166 Sum_probs=69.8
Q ss_pred CCCceEEEecCCCCCCCChHHH-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSF-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
...|+||++.|+-+-...+..+ .+.|.. .|+.++++|.||.|.|...+- ..+.+.+-..+.+.+...
T Consensus 188 ~p~P~VIv~gGlDs~qeD~~~l~~~~l~~--------rGiA~LtvDmPG~G~s~~~~l---~~D~~~l~~aVLd~L~~~p 256 (411)
T PF06500_consen 188 KPYPTVIVCGGLDSLQEDLYRLFRDYLAP--------RGIAMLTVDMPGQGESPKWPL---TQDSSRLHQAVLDYLASRP 256 (411)
T ss_dssp S-EEEEEEE--TTS-GGGGHHHHHCCCHH--------CT-EEEEE--TTSGGGTTT-S----S-CCHHHHHHHHHHHHST
T ss_pred CCCCEEEEeCCcchhHHHHHHHHHHHHHh--------CCCEEEEEccCCCcccccCCC---CcCHHHHHHHHHHHHhcCC
Confidence 4567788888887777665544 455666 899999999999999865331 222344555666666554
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.. ++.++|.|+||.+|.++|..+++ |++++|.++++.
T Consensus 257 ~VD~~-RV~~~G~SfGGy~AvRlA~le~~--------RlkavV~~Ga~v 296 (411)
T PF06500_consen 257 WVDHT-RVGAWGFSFGGYYAVRLAALEDP--------RLKAVVALGAPV 296 (411)
T ss_dssp TEEEE-EEEEEEETHHHHHHHHHHHHTTT--------T-SEEEEES---
T ss_pred ccChh-heEEEEeccchHHHHHHHHhccc--------ceeeEeeeCchH
Confidence 345 89999999999999999998888 999999999864
No 102
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.50 E-value=8.7e-12 Score=98.92 Aligned_cols=179 Identities=21% Similarity=0.233 Sum_probs=129.8
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC-CCCCCCCCCC----C----CCCHHHHHHHHHHH
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH-GRSAEIEGLD----P----PHDIANAANDLANL 115 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-G~S~~~~~~~----~----~~~~~~~~~~l~~~ 115 (325)
|.||++|++.+-....+.+++.|+. .||.|+++|+-+. |.+....... . ..+..+...|+.+.
T Consensus 28 P~VIv~hei~Gl~~~i~~~a~rlA~--------~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~ 99 (236)
T COG0412 28 PGVIVLHEIFGLNPHIRDVARRLAK--------AGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAA 99 (236)
T ss_pred CEEEEEecccCCchHHHHHHHHHHh--------CCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHH
Confidence 8999999999988899999999998 9999999998773 3333222100 1 12336777888888
Q ss_pred HHHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCC
Q 020518 116 VKAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLP 189 (325)
Q Consensus 116 l~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (325)
++.+. .+ ++.++|+||||.+++.++.+.|+ +++.+..-+.......
T Consensus 100 ~~~L~~~~~~~~~-~ig~~GfC~GG~~a~~~a~~~~~---------v~a~v~fyg~~~~~~~------------------ 151 (236)
T COG0412 100 LDYLARQPQVDPK-RIGVVGFCMGGGLALLAATRAPE---------VKAAVAFYGGLIADDT------------------ 151 (236)
T ss_pred HHHHHhCCCCCCc-eEEEEEEcccHHHHHHhhcccCC---------ccEEEEecCCCCCCcc------------------
Confidence 77662 34 79999999999999999999875 8888776655321100
Q ss_pred CCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCC
Q 020518 190 SSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSD 269 (325)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~ 269 (325)
....+.++|+++++|+.|.
T Consensus 152 -------------------------------------------------------------~~~~~~~~pvl~~~~~~D~ 170 (236)
T COG0412 152 -------------------------------------------------------------ADAPKIKVPVLLHLAGEDP 170 (236)
T ss_pred -------------------------------------------------------------cccccccCcEEEEecccCC
Confidence 0011234899999999999
Q ss_pred CCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC-----------hHHHHHHHHHHHhc
Q 020518 270 RWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN-----------PKGLLEIVAPRIAS 324 (325)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~-----------p~~~~~~i~~fl~~ 324 (325)
.++....+.+.+.+...+. ++++.+++++.|.++-+. .+.-.+.+.+|+++
T Consensus 171 ~~p~~~~~~~~~~~~~~~~----~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~ 232 (236)
T COG0412 171 YIPAADVDALAAALEDAGV----KVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKR 232 (236)
T ss_pred CCChhHHHHHHHHHHhcCC----CeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHH
Confidence 9999888888887777542 289999999989887442 13444555666653
No 103
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.48 E-value=1.4e-12 Score=129.45 Aligned_cols=101 Identities=19% Similarity=0.255 Sum_probs=88.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
+++++|+||++++...|..+...|. .+++|++++++|++.+.. ..++++++++++.+.++.+...+
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~~l~---------~~~~v~~~~~~g~~~~~~-----~~~~l~~la~~~~~~i~~~~~~~ 1133 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSRYLD---------PQWSIYGIQSPRPDGPMQ-----TATSLDEVCEAHLATLLEQQPHG 1133 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHHhcC---------CCCcEEEEECCCCCCCCC-----CCCCHHHHHHHHHHHHHhhCCCC
Confidence 5789999999999999999998887 678999999999987632 46899999999999999876555
Q ss_pred CEEEEEeChhHHHHHHHHHHc---cccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSC---ARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~---p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++++||||||.+|+++|.+. ++ ++..++++++.+
T Consensus 1134 p~~l~G~S~Gg~vA~e~A~~l~~~~~--------~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1134 PYHLLGYSLGGTLAQGIAARLRARGE--------EVAFLGLLDTWP 1171 (1296)
T ss_pred CEEEEEechhhHHHHHHHHHHHHcCC--------ceeEEEEecCCC
Confidence 899999999999999999874 55 899999998754
No 104
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.47 E-value=2.7e-11 Score=102.11 Aligned_cols=259 Identities=13% Similarity=0.106 Sum_probs=148.0
Q ss_pred CceEEEecCCCCCCCCh-HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNW-RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.|+||++.-+.+..... +.+++.|. .|+.|+.+|+..-+...... ..++++++++-+.++++++|.
T Consensus 102 ~~pvLiV~Pl~g~~~~L~RS~V~~Ll---------~g~dVYl~DW~~p~~vp~~~---~~f~ldDYi~~l~~~i~~~G~- 168 (406)
T TIGR01849 102 GPAVLIVAPMSGHYATLLRSTVEALL---------PDHDVYITDWVNARMVPLSA---GKFDLEDYIDYLIEFIRFLGP- 168 (406)
T ss_pred CCcEEEEcCCchHHHHHHHHHHHHHh---------CCCcEEEEeCCCCCCCchhc---CCCCHHHHHHHHHHHHHHhCC-
Confidence 37999999988644333 34555555 79999999998777554322 578999999999999999974
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHH------HHHHHhh-cCCC-----
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVE------KVLQTLQ-SLPS----- 190 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~----- 190 (325)
+++++|+|+||..++.+++...+... ..+++++++++++............+. ...+.+. ..+.
T Consensus 169 -~v~l~GvCqgG~~~laa~Al~a~~~~---p~~~~sltlm~~PID~~~~p~~v~~~a~~~~i~~~~~~~i~~vp~~~~g~ 244 (406)
T TIGR01849 169 -DIHVIAVCQPAVPVLAAVALMAENEP---PAQPRSMTLMGGPIDARASPTVVNELAREKPIEWFQHNVIMRVPFPYPGA 244 (406)
T ss_pred -CCcEEEEchhhHHHHHHHHHHHhcCC---CCCcceEEEEecCccCCCCCchHHHHhhcccHHHHHHHhhhccCccccCC
Confidence 48999999999998888777633110 117999999998765543211111111 1111111 1111
Q ss_pred ---CCCcHHHHHHHHHhhcc---chhHHHHHhhcccCCCcc------------cccccChhHHHHhhhcc-cCCc-----
Q 020518 191 ---SIPSRKWLVNHMMELGF---SKSLSEWIGTNLKKSGER------------ETWAFNLDGAVQMFNSY-REMS----- 246 (325)
Q Consensus 191 ---~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~-~~~~----- 246 (325)
..+... ....+..... .....+++........+. .........+..++... ....
T Consensus 245 gr~v~PG~~-~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~~dlpge~y~~~v~~vf~~n~L~~G~ 323 (406)
T TIGR01849 245 GRLVYPGFL-QLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAVMDMTAEFYLQTIDVVFQQFLLPQGK 323 (406)
T ss_pred CCcccCHHH-HHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhccCCcHHHHHHHHHHHHHhCCccCCc
Confidence 111111 1111111010 111111111110000000 00011122222222221 1111
Q ss_pred -----ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc---ChHHHHHHH
Q 020518 247 -----YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGLLEIV 318 (325)
Q Consensus 247 -----~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i 318 (325)
..-.+.+|+ ++|++.|.|++|+++++.....+.++..+++.. +.+..+.+++||.-.+. -++++...|
T Consensus 324 l~v~G~~Vdl~~I~-~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~---~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i 399 (406)
T TIGR01849 324 FIVEGKRVDPGAIT-RVALLTVEGENDDISGLGQTKAALRLCTGIPED---MKRHHLQPGVGHYGVFSGSRFREEIYPLV 399 (406)
T ss_pred EEECCEEecHHHCc-ccceEEEeccCCCcCCHHHhHHHHHHhhcCChh---hceEeecCCCCeEEEeeChhhhhhhchHH
Confidence 011222232 289999999999999999999999987554431 25677787889998874 467888999
Q ss_pred HHHHhc
Q 020518 319 APRIAS 324 (325)
Q Consensus 319 ~~fl~~ 324 (325)
.+||.+
T Consensus 400 ~~wl~~ 405 (406)
T TIGR01849 400 REFIRR 405 (406)
T ss_pred HHHHHh
Confidence 999875
No 105
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=99.43 E-value=7e-12 Score=99.62 Aligned_cols=216 Identities=13% Similarity=0.160 Sum_probs=125.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHH-hhhhccCCCCceEE--EEeCCCCC----CC--C-CCCC----CCC-CC-CCHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLA-STLSQTSASSEWRM--VLVDLRNH----GR--S-AEIE----GLD-PP-HDIA 106 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~v--i~~D~~G~----G~--S-~~~~----~~~-~~-~~~~ 106 (325)
+..|.||+||++++...+..++..+. +.- ..-.+ +-++.-|. |. . ...+ .+. .. .+..
T Consensus 10 ~~tPTifihG~~gt~~s~~~mi~~~~~~~~------~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~ 83 (255)
T PF06028_consen 10 STTPTIFIHGYGGTANSFNHMINRLENKQG------VAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYK 83 (255)
T ss_dssp S-EEEEEE--TTGGCCCCHHHHHHHHHCST------S-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHH
T ss_pred CCCcEEEECCCCCChhHHHHHHHHHHhhcC------CCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHH
Confidence 46799999999999999999999997 421 12233 33333342 21 1 1111 000 22 4688
Q ss_pred HHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHH
Q 020518 107 NAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVL 182 (325)
Q Consensus 107 ~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~ 182 (325)
..+..+..+|..| +++ ++.+|||||||..++.|+..+.... ....+.++|.|+++............
T Consensus 84 ~qa~wl~~vl~~L~~~Y~~~-~~N~VGHSmGg~~~~~yl~~~~~~~---~~P~l~K~V~Ia~pfng~~~~~~~~~----- 154 (255)
T PF06028_consen 84 KQAKWLKKVLKYLKKKYHFK-KFNLVGHSMGGLSWTYYLENYGNDK---NLPKLNKLVTIAGPFNGILGMNDDQN----- 154 (255)
T ss_dssp HHHHHHHHHHHHHHHCC--S-EEEEEEETHHHHHHHHHHHHCTTGT---TS-EEEEEEEES--TTTTTCCSC-TT-----
T ss_pred HHHHHHHHHHHHHHHhcCCC-EEeEEEECccHHHHHHHHHHhccCC---CCcccceEEEeccccCccccccccch-----
Confidence 8888888888766 678 9999999999999999998864311 11268999999986433211100000
Q ss_pred HHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEE
Q 020518 183 QTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAI 262 (325)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~ 262 (325)
........+. .....+..+...+ -..++..+.+|-
T Consensus 155 --~~~~~~~gp~-----------------------------------~~~~~y~~l~~~~--------~~~~p~~i~VLn 189 (255)
T PF06028_consen 155 --QNDLNKNGPK-----------------------------------SMTPMYQDLLKNR--------RKNFPKNIQVLN 189 (255)
T ss_dssp --TT-CSTT-BS-----------------------------------S--HHHHHHHHTH--------GGGSTTT-EEEE
T ss_pred --hhhhcccCCc-----------------------------------ccCHHHHHHHHHH--------HhhCCCCeEEEE
Confidence 0000000000 0011111111110 123445578999
Q ss_pred EeeC------CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC--CCccccccChHHHHHHHHHHHh
Q 020518 263 VRAE------KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN--AGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 263 i~g~------~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
|.|. .|..||...+..+..++..... .-+-.++.| +.|.-..|+| +|.+.|.+||-
T Consensus 190 I~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~----~Y~e~~v~G~~a~HS~LheN~-~V~~~I~~FLw 253 (255)
T PF06028_consen 190 IYGDLEDGSNSDGIVPNASSLSLRYLLKNRAK----SYQEKTVTGKDAQHSQLHENP-QVDKLIIQFLW 253 (255)
T ss_dssp EEEESBTTCSBTSSSBHHHHCTHHHHCTTTSS----EEEEEEEESGGGSCCGGGCCH-HHHHHHHHHHC
T ss_pred EecccCCCCCCCeEEeHHHHHHHHHHhhcccC----ceEEEEEECCCCccccCCCCH-HHHHHHHHHhc
Confidence 9998 7889999888888888866443 266677765 6898888876 67789999983
No 106
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=99.39 E-value=4.4e-11 Score=86.75 Aligned_cols=172 Identities=16% Similarity=0.167 Sum_probs=112.6
Q ss_pred CceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.+.+|++||+.+|. .+|....+ ..+ ...+ .+++. .. ..-..+++++.+.+.+... .+
T Consensus 2 ~~~~lIVpG~~~Sg~~HWq~~we---~~l------~~a~--rveq~--------~w--~~P~~~dWi~~l~~~v~a~-~~ 59 (181)
T COG3545 2 MTDVLIVPGYGGSGPNHWQSRWE---SAL------PNAR--RVEQD--------DW--EAPVLDDWIARLEKEVNAA-EG 59 (181)
T ss_pred CceEEEecCCCCCChhHHHHHHH---hhC------ccch--hcccC--------CC--CCCCHHHHHHHHHHHHhcc-CC
Confidence 35799999998766 56665432 211 1111 11111 11 4557889999888888887 34
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHM 202 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (325)
+++||+||+|+.+++.++.+... .|.+++|++++-...... . .
T Consensus 60 -~~vlVAHSLGc~~v~h~~~~~~~--------~V~GalLVAppd~~~~~~-~----~----------------------- 102 (181)
T COG3545 60 -PVVLVAHSLGCATVAHWAEHIQR--------QVAGALLVAPPDVSRPEI-R----P----------------------- 102 (181)
T ss_pred -CeEEEEecccHHHHHHHHHhhhh--------ccceEEEecCCCcccccc-c----h-----------------------
Confidence 79999999999999999998877 899999999863211000 0 0
Q ss_pred HhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHH
Q 020518 203 MELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGL 282 (325)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~ 282 (325)
......+. .+..+..-|.++|...+|++++.+..+.+...
T Consensus 103 -------------------------------------~~~~tf~~---~p~~~lpfps~vvaSrnDp~~~~~~a~~~a~~ 142 (181)
T COG3545 103 -------------------------------------KHLMTFDP---IPREPLPFPSVVVASRNDPYVSYEHAEDLANA 142 (181)
T ss_pred -------------------------------------hhccccCC---CccccCCCceeEEEecCCCCCCHHHHHHHHHh
Confidence 00000011 11222235889999999999999888777776
Q ss_pred hhhcCCCCCCceeEEEecCCCcccccc---ChHHHHHHHHHHHh
Q 020518 283 ANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGLLEIVAPRIA 323 (325)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~~~~i~~fl~ 323 (325)
.. +.++.+.++||+.-.+ .-.+....+.+|+.
T Consensus 143 wg---------s~lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s 177 (181)
T COG3545 143 WG---------SALVDVGEGGHINAESGFGPWPEGYALLAQLLS 177 (181)
T ss_pred cc---------HhheecccccccchhhcCCCcHHHHHHHHHHhh
Confidence 65 6899999999976543 33455556666654
No 107
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.38 E-value=6.2e-11 Score=99.74 Aligned_cols=127 Identities=19% Similarity=0.214 Sum_probs=92.8
Q ss_pred cccccceEEEEcccCCCCCCCceEEEecCCCCCCCChH------HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWR------SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIE 97 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~------~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~ 97 (325)
+.||..+....+.... ..+|+|++.||+.+++..|- .+.-.|++ +||.|+.-+.||.-.|.+..
T Consensus 55 T~DgYiL~lhRIp~~~--~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~Lad--------aGYDVWLgN~RGn~ySr~h~ 124 (403)
T KOG2624|consen 55 TEDGYILTLHRIPRGK--KKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLAD--------AGYDVWLGNNRGNTYSRKHK 124 (403)
T ss_pred ccCCeEEEEeeecCCC--CCCCcEEEeeccccccccceecCccccHHHHHHH--------cCCceeeecCcCcccchhhc
Confidence 3566655555443322 56899999999999999994 34555666 89999999999987775432
Q ss_pred CC-------CCCCCHHHHHH-HH----HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 98 GL-------DPPHDIANAAN-DL----ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 98 ~~-------~~~~~~~~~~~-~l----~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.. ...+++.+++. || ..+++..+.+ +++.||||.|+.+....+...|+-. .+|+..++++|+
T Consensus 125 ~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~-kl~yvGHSQGtt~~fv~lS~~p~~~-----~kI~~~~aLAP~ 198 (403)
T KOG2624|consen 125 KLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQE-KLHYVGHSQGTTTFFVMLSERPEYN-----KKIKSFIALAPA 198 (403)
T ss_pred ccCCcCCcceeecchhhhhhcCHHHHHHHHHHhcccc-ceEEEEEEccchhheehhcccchhh-----hhhheeeeecch
Confidence 11 14567777653 44 4444555667 9999999999999999999887621 379999999988
Q ss_pred C
Q 020518 166 P 166 (325)
Q Consensus 166 ~ 166 (325)
.
T Consensus 199 ~ 199 (403)
T KOG2624|consen 199 A 199 (403)
T ss_pred h
Confidence 6
No 108
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.38 E-value=6.9e-12 Score=96.87 Aligned_cols=228 Identities=13% Similarity=0.095 Sum_probs=134.3
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC----CCCC-C
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE----IEGL-D 100 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~----~~~~-~ 100 (325)
.|.+|.-+..-+.......|.||-.||+++....|..+...-. .||.|+.+|-||.|.|.. ++.. .
T Consensus 65 ~g~rI~gwlvlP~~~~~~~P~vV~fhGY~g~~g~~~~~l~wa~---------~Gyavf~MdvRGQg~~~~dt~~~p~~~s 135 (321)
T COG3458 65 GGARIKGWLVLPRHEKGKLPAVVQFHGYGGRGGEWHDMLHWAV---------AGYAVFVMDVRGQGSSSQDTADPPGGPS 135 (321)
T ss_pred CCceEEEEEEeecccCCccceEEEEeeccCCCCCccccccccc---------cceeEEEEecccCCCccccCCCCCCCCc
Confidence 4566665554444333567899999999999988877665444 899999999999998843 2110 0
Q ss_pred -------------CCCCHHHHHHHHHHHHH------HhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEE
Q 020518 101 -------------PPHDIANAANDLANLVK------AKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWV 161 (325)
Q Consensus 101 -------------~~~~~~~~~~~l~~~l~------~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvl 161 (325)
..|-+.....|+..+++ ..+.+ ++.+.|.|.||.+++.+++..| ++++++.
T Consensus 136 ~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~-Ri~v~G~SqGGglalaaaal~~---------rik~~~~ 205 (321)
T COG3458 136 DPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEE-RIGVTGGSQGGGLALAAAALDP---------RIKAVVA 205 (321)
T ss_pred CCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchh-heEEeccccCchhhhhhhhcCh---------hhhcccc
Confidence 11112233344444443 33445 8999999999999999999887 6999888
Q ss_pred EecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhc
Q 020518 162 LDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNS 241 (325)
Q Consensus 162 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (325)
+-|..+..+. ++.. ...... .++..+++..-.. ....+..
T Consensus 206 ~~Pfl~df~r---------~i~~-----~~~~~y-------------dei~~y~k~h~~~-------------e~~v~~T 245 (321)
T COG3458 206 DYPFLSDFPR---------AIEL-----ATEGPY-------------DEIQTYFKRHDPK-------------EAEVFET 245 (321)
T ss_pred cccccccchh---------heee-----cccCcH-------------HHHHHHHHhcCch-------------HHHHHHH
Confidence 7766433211 1100 000011 1111122211100 1111122
Q ss_pred ccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHH
Q 020518 242 YREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPR 321 (325)
Q Consensus 242 ~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 321 (325)
+.-.|......+++ +|+|+..|-.|++++|...-.+...+.. ..+..+++.-+|. +-|.-..+.+..|
T Consensus 246 L~yfD~~n~A~RiK--~pvL~svgL~D~vcpPstqFA~yN~l~~-------~K~i~iy~~~aHe---~~p~~~~~~~~~~ 313 (321)
T COG3458 246 LSYFDIVNLAARIK--VPVLMSVGLMDPVCPPSTQFAAYNALTT-------SKTIEIYPYFAHE---GGPGFQSRQQVHF 313 (321)
T ss_pred HhhhhhhhHHHhhc--cceEEeecccCCCCCChhhHHHhhcccC-------CceEEEeeccccc---cCcchhHHHHHHH
Confidence 22223333344555 8999999999999999765444444433 1677778776664 3455555556666
Q ss_pred Hhc
Q 020518 322 IAS 324 (325)
Q Consensus 322 l~~ 324 (325)
++.
T Consensus 314 l~~ 316 (321)
T COG3458 314 LKI 316 (321)
T ss_pred HHh
Confidence 653
No 109
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.37 E-value=1.1e-11 Score=93.42 Aligned_cols=251 Identities=16% Similarity=0.153 Sum_probs=138.1
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHD 104 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~ 104 (325)
.||..+.-..+...+. ....|+.-.+.+.....|++++..+++ .||.|..+|+||.|.|.........+.
T Consensus 13 ~DG~~l~~~~~pA~~~--~~g~~~va~a~Gv~~~fYRrfA~~a~~--------~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 13 PDGYSLPGQRFPADGK--ASGRLVVAGATGVGQYFYRRFAAAAAK--------AGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred CCCccCccccccCCCC--CCCcEEecccCCcchhHhHHHHHHhhc--------cCceEEEEecccccCCCccccccCccc
Confidence 4677776666655321 222455555556666777788887776 999999999999999988764334567
Q ss_pred HHHHHH-HHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHH
Q 020518 105 IANAAN-DLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEK 180 (325)
Q Consensus 105 ~~~~~~-~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~ 180 (325)
+.|++. |+.+.++.++ ...+.+.||||+||.+.-.+.+ ++ +.......++.+...........+..
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~~-~~---------k~~a~~vfG~gagwsg~m~~~~~l~~ 152 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLGQ-HP---------KYAAFAVFGSGAGWSGWMGLRERLGA 152 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeeccccc-Cc---------ccceeeEeccccccccchhhhhcccc
Confidence 777653 4555554442 3448999999999997655544 33 34444444444332211100000000
Q ss_pred HHHHhhcC--CCCCCcHHHHHHHHHhhc------cchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccccc
Q 020518 181 VLQTLQSL--PSSIPSRKWLVNHMMELG------FSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLE 252 (325)
Q Consensus 181 ~~~~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (325)
+ .+..+ +........+...+.... .-+...+|......... -.... ...+..+
T Consensus 153 ~--~l~~lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fd--------dp~~~---------~~~q~ya 213 (281)
T COG4757 153 V--LLWNLVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFD--------DPAMR---------NYRQVYA 213 (281)
T ss_pred e--eeccccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccccc--------ChhHh---------HHHHHHH
Confidence 0 00000 000000000111111111 11122223222210000 00000 1112223
Q ss_pred CCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCC----CccccccCh-HHHHHHHHHHH
Q 020518 253 HPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNA----GHWVHVDNP-KGLLEIVAPRI 322 (325)
Q Consensus 253 ~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----gH~~~~e~p-~~~~~~i~~fl 322 (325)
.+. +|++.+...+|+..|+...+.+.....+.+ .+...++.+ ||+-..-+| |.+.+.+.+|+
T Consensus 214 aVr--tPi~~~~~~DD~w~P~As~d~f~~~y~nAp------l~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 214 AVR--TPITFSRALDDPWAPPASRDAFASFYRNAP------LEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred Hhc--CceeeeccCCCCcCCHHHHHHHHHhhhcCc------ccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 333 799999999999999999999988888744 566666554 999988877 77777776665
No 110
>PRK10115 protease 2; Provisional
Probab=99.37 E-value=9.6e-11 Score=107.19 Aligned_cols=216 Identities=12% Similarity=0.067 Sum_probs=132.1
Q ss_pred ccccceEE-EEcccCC-CCCCCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC---CC
Q 020518 25 RSLQTLAY-EEVRSSS-DRPYTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE---IE 97 (325)
Q Consensus 25 ~~~~~l~y-~~~~~~~-~~~~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~---~~ 97 (325)
.||.+|.+ ..+.+.. .....|.||++||..+... .|......|.+ +||.|+.++.||-|.-.. ..
T Consensus 424 ~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~--------rG~~v~~~n~RGs~g~G~~w~~~ 495 (686)
T PRK10115 424 RDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLD--------RGFVYAIVHVRGGGELGQQWYED 495 (686)
T ss_pred CCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHH--------CCcEEEEEEcCCCCccCHHHHHh
Confidence 57888886 3443321 2244699999999877663 46665666776 899999999998653321 11
Q ss_pred C--CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 98 G--LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 98 ~--~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
+ .....+++|+++.+..++++- ..+ ++.+.|.|.||.++..++.++|+ +++++|...+.....
T Consensus 496 g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~-rl~i~G~S~GG~l~~~~~~~~Pd--------lf~A~v~~vp~~D~~---- 562 (686)
T PRK10115 496 GKFLKKKNTFNDYLDACDALLKLGYGSPS-LCYGMGGSAGGMLMGVAINQRPE--------LFHGVIAQVPFVDVV---- 562 (686)
T ss_pred hhhhcCCCcHHHHHHHHHHHHHcCCCChH-HeEEEEECHHHHHHHHHHhcChh--------heeEEEecCCchhHh----
Confidence 0 003457778777777777653 235 89999999999999999999999 999999887764321
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
..+..- .......+ ..+|- ... + .....++..+.. ...+.+
T Consensus 563 ---------~~~~~~-~~p~~~~~-------------~~e~G----~p~--------~-~~~~~~l~~~SP---~~~v~~ 603 (686)
T PRK10115 563 ---------TTMLDE-SIPLTTGE-------------FEEWG----NPQ--------D-PQYYEYMKSYSP---YDNVTA 603 (686)
T ss_pred ---------hhcccC-CCCCChhH-------------HHHhC----CCC--------C-HHHHHHHHHcCc---hhccCc
Confidence 111000 00000000 00000 000 0 001111222221 122333
Q ss_pred CCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe---cCCCccc
Q 020518 254 PPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL---PNAGHWV 306 (325)
Q Consensus 254 ~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gH~~ 306 (325)
+ ..| +|+++|.+|..|++....++...+...+. +++++++ +++||..
T Consensus 604 ~--~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~----~~~~vl~~~~~~~GHg~ 654 (686)
T PRK10115 604 Q--AYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKT----DDHLLLLCTDMDSGHGG 654 (686)
T ss_pred c--CCCceeEEecCCCCCcCchHHHHHHHHHHhcCC----CCceEEEEecCCCCCCC
Confidence 3 268 56679999999999888888777776543 2677777 8999984
No 111
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.35 E-value=1.2e-11 Score=97.34 Aligned_cols=112 Identities=20% Similarity=0.197 Sum_probs=73.6
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHH----HHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANA----ANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~----~~~l~~~l~~ 118 (325)
++.|||||||.+++...|+.+...+.+..........++++++|+......-. ...+.+. .+.+..+++.
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~------g~~l~~q~~~~~~~i~~i~~~ 76 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFH------GRTLQRQAEFLAEAIKYILEL 76 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccc------cccHHHHHHHHHHHHHHHHHh
Confidence 47899999999999988888876663211111112468899999876543222 1223333 3334444444
Q ss_pred h-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 K-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
. ..+ ++++|||||||.+|..++...+. ....|+.+|.++++.
T Consensus 77 ~~~~~~~~~-~vilVgHSmGGlvar~~l~~~~~-----~~~~v~~iitl~tPh 123 (225)
T PF07819_consen 77 YKSNRPPPR-SVILVGHSMGGLVARSALSLPNY-----DPDSVKTIITLGTPH 123 (225)
T ss_pred hhhccCCCC-ceEEEEEchhhHHHHHHHhcccc-----ccccEEEEEEEcCCC
Confidence 4 345 89999999999999988876442 112799999999764
No 112
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=99.34 E-value=3e-11 Score=105.20 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=90.3
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh----------hccCCCCceEEEEeCCC-CCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL----------SQTSASSEWRMVLVDLR-NHGRSAE 95 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~----------~~~~~~~~~~vi~~D~~-G~G~S~~ 95 (325)
+..+.|.-+.+.....+.|.||+++|.++++..+-.+.+ ..... ...+-++...++.+|.| |+|.|..
T Consensus 60 ~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~G~f~E-~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~ 138 (462)
T PTZ00472 60 DKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMFALLAE-NGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYA 138 (462)
T ss_pred CceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHHhhhcc-CCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccC
Confidence 567888887766555678999999999998865422211 10000 00012345689999975 8888876
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEecCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDSVP 166 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~~~ 166 (325)
... ....+.++.++|+.++++.. ... +++|+|||+||..+..+|.+.-++... .....++++++-++..
T Consensus 139 ~~~-~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~-~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 139 DKA-DYDHNESEVSEDMYNFLQAFFGSHEDLRAN-DLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred CCC-CCCCChHHHHHHHHHHHHHHHHhCccccCC-CEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 432 13456788999998888854 335 999999999999998888764321110 0112578888877754
No 113
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.32 E-value=1.4e-10 Score=94.44 Aligned_cols=242 Identities=16% Similarity=0.187 Sum_probs=131.0
Q ss_pred CCCceEEEecCCCCCCCChHH--H-HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-CCCCHHHH---------
Q 020518 42 PYTSTAFVLHGLLGSGRNWRS--F-SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-PPHDIANA--------- 108 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~--~-~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-~~~~~~~~--------- 108 (325)
+.+|.+|.++|-|+.. .|+. + +..|.+ .|+..+.+..|-||...+..... .-.+..|+
T Consensus 90 ~~rp~~IhLagTGDh~-f~rR~~l~a~pLl~--------~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~ 160 (348)
T PF09752_consen 90 PYRPVCIHLAGTGDHG-FWRRRRLMARPLLK--------EGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATIL 160 (348)
T ss_pred CCCceEEEecCCCccc-hhhhhhhhhhHHHH--------cCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHH
Confidence 4688899999988744 4433 3 566666 89999999999999876544210 11122221
Q ss_pred -HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 109 -ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 109 -~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
+..|..++++.|.. ++.+.|.||||.+|...|+..|. .|..+-.+++.... .......+..
T Consensus 161 E~~~Ll~Wl~~~G~~-~~g~~G~SmGG~~A~laa~~~p~--------pv~~vp~ls~~sAs--~vFt~Gvls~------- 222 (348)
T PF09752_consen 161 ESRALLHWLEREGYG-PLGLTGISMGGHMAALAASNWPR--------PVALVPCLSWSSAS--VVFTEGVLSN------- 222 (348)
T ss_pred HHHHHHHHHHhcCCC-ceEEEEechhHhhHHhhhhcCCC--------ceeEEEeecccCCC--cchhhhhhhc-------
Confidence 22345555666888 99999999999999999999997 66555555533211 1111111111
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccC-CCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKK-SGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAE 266 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 266 (325)
...+..+...+....+.+............ .........+.+....+...+........+......-.+++|.+.
T Consensus 223 ----~i~W~~L~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~~P~dp~~ii~V~A~ 298 (348)
T PF09752_consen 223 ----SINWDALEKQFEDTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFPVPVDPSAIIFVAAK 298 (348)
T ss_pred ----CCCHHHHHHHhcccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccccccCCCCCCCcEEEEEec
Confidence 011111111110000001000000000000 000000000111111111111111111122222222357899999
Q ss_pred CCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHh
Q 020518 267 KSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 267 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~ 323 (325)
+|.++|......+++..+. +++..+++ ||.. ++-+.+.|.+.|.+-++
T Consensus 299 ~DaYVPr~~v~~Lq~~WPG--------sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 299 NDAYVPRHGVLSLQEIWPG--------SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CceEechhhcchHHHhCCC--------CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 9999998888888888876 99999998 9974 44677899999888665
No 114
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.29 E-value=4.7e-10 Score=88.46 Aligned_cols=103 Identities=21% Similarity=0.265 Sum_probs=65.3
Q ss_pred EEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----
Q 020518 47 AFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA----- 118 (325)
Q Consensus 47 vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~----- 118 (325)
||++||.+... .....++..+++. .|+.|+.+|+|=..... ....+++..+.+.-++++
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~-------~g~~v~~~~Yrl~p~~~------~p~~~~D~~~a~~~l~~~~~~~~ 67 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAE-------RGFVVVSIDYRLAPEAP------FPAALEDVKAAYRWLLKNADKLG 67 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHH-------HTSEEEEEE---TTTSS------TTHHHHHHHHHHHHHHHTHHHHT
T ss_pred CEEECCcccccCChHHHHHHHHHHHhh-------ccEEEEEeecccccccc------ccccccccccceeeecccccccc
Confidence 79999987643 4445566666643 68999999999331111 223344444444444554
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+.+ +++|+|+|.||.+++.++.+..+.. ...++++++++|...
T Consensus 68 ~d~~-~i~l~G~SAGg~la~~~~~~~~~~~----~~~~~~~~~~~p~~d 111 (211)
T PF07859_consen 68 IDPE-RIVLIGDSAGGHLALSLALRARDRG----LPKPKGIILISPWTD 111 (211)
T ss_dssp EEEE-EEEEEEETHHHHHHHHHHHHHHHTT----TCHESEEEEESCHSS
T ss_pred cccc-ceEEeecccccchhhhhhhhhhhhc----ccchhhhhccccccc
Confidence 3456 8999999999999999998776511 114899999998643
No 115
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.28 E-value=2.1e-10 Score=90.29 Aligned_cols=110 Identities=26% Similarity=0.314 Sum_probs=76.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
+=|.|||+||+......|..+..+++. .||-|+++|+...+...... ...+..++++++.+=++..
T Consensus 16 ~yPVv~f~~G~~~~~s~Ys~ll~hvAS--------hGyIVV~~d~~~~~~~~~~~---~~~~~~~vi~Wl~~~L~~~l~~ 84 (259)
T PF12740_consen 16 TYPVVLFLHGFLLINSWYSQLLEHVAS--------HGYIVVAPDLYSIGGPDDTD---EVASAAEVIDWLAKGLESKLPL 84 (259)
T ss_pred CcCEEEEeCCcCCCHHHHHHHHHHHHh--------CceEEEEecccccCCCCcch---hHHHHHHHHHHHHhcchhhccc
Confidence 468999999999877778889999998 89999999976644321111 1223344444433322221
Q ss_pred ----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 120 ----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 120 ----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.. ++.|.|||-||-+|..++..+-+... ..+++++++++|..+
T Consensus 85 ~v~~D~s-~l~l~GHSrGGk~Af~~al~~~~~~~---~~~~~ali~lDPVdG 132 (259)
T PF12740_consen 85 GVKPDFS-KLALAGHSRGGKVAFAMALGNASSSL---DLRFSALILLDPVDG 132 (259)
T ss_pred ccccccc-ceEEeeeCCCCHHHHHHHhhhccccc---ccceeEEEEeccccc
Confidence 445 89999999999999999988721000 128999999999853
No 116
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.27 E-value=4.8e-09 Score=86.68 Aligned_cols=131 Identities=20% Similarity=0.133 Sum_probs=91.6
Q ss_pred ccccccceEEEEcccCCCC--CCCceEEEecCCCCC-----CCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 23 TTRSLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGS-----GRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
+......+..+.|.+.... ...|.||++||.|.. +..|..++..++.. .+.-|+++|+|=--...
T Consensus 67 ~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~-------~~~vvvSVdYRLAPEh~- 138 (336)
T KOG1515|consen 67 TIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAE-------LNCVVVSVDYRLAPEHP- 138 (336)
T ss_pred EecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHH-------cCeEEEecCcccCCCCC-
Confidence 3345667788877775443 357889999998762 45677888888765 57899999998333222
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHH------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 96 IEGLDPPHDIANAANDLANLVKA------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+..++|-.+.+.-+.++ .+.+ ++.|+|-|.||.+|..+|.+.-+.. ....++++.|++-|.....
T Consensus 139 -----~Pa~y~D~~~Al~w~~~~~~~~~~~D~~-rv~l~GDSaGGNia~~va~r~~~~~--~~~~ki~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 139 -----FPAAYDDGWAALKWVLKNSWLKLGADPS-RVFLAGDSAGGNIAHVVAQRAADEK--LSKPKIKGQILIYPFFQGT 210 (336)
T ss_pred -----CCccchHHHHHHHHHHHhHHHHhCCCcc-cEEEEccCccHHHHHHHHHHHhhcc--CCCcceEEEEEEecccCCC
Confidence 344566666666555553 2566 8999999999999999998865311 1123899999999875443
No 117
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.27 E-value=1.1e-10 Score=86.75 Aligned_cols=185 Identities=21% Similarity=0.198 Sum_probs=118.1
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----hC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA----KG 120 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~----~~ 120 (325)
..+||+-|=++-...=..++..|++ +|+.|+.+|-+-|=.+.+ +.++.+.|+.++++. .+
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~--------~G~~VvGvdsl~Yfw~~r--------tP~~~a~Dl~~~i~~y~~~w~ 66 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAK--------QGVPVVGVDSLRYFWSER--------TPEQTAADLARIIRHYRARWG 66 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHH--------CCCeEEEechHHHHhhhC--------CHHHHHHHHHHHHHHHHHHhC
Confidence 4578888777644333457777877 999999999776655544 456667777666654 46
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
.+ +++|+|.|+|+-+.-....+.|..... +|+.++|+++.....
T Consensus 67 ~~-~vvLiGYSFGADvlP~~~nrLp~~~r~----~v~~v~Ll~p~~~~d------------------------------- 110 (192)
T PF06057_consen 67 RK-RVVLIGYSFGADVLPFIYNRLPAALRA----RVAQVVLLSPSTTAD------------------------------- 110 (192)
T ss_pred Cc-eEEEEeecCCchhHHHHHhhCCHHHHh----heeEEEEeccCCcce-------------------------------
Confidence 67 999999999999999888888864433 899999999764221
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
+.-....|+...... ...+..+.+.+++. .|+++|+|.+++-.....
T Consensus 111 ------Feihv~~wlg~~~~~---------------------~~~~~~pei~~l~~-~~v~CiyG~~E~d~~cp~----- 157 (192)
T PF06057_consen 111 ------FEIHVSGWLGMGGDD---------------------AAYPVIPEIAKLPP-APVQCIYGEDEDDSLCPS----- 157 (192)
T ss_pred ------EEEEhhhhcCCCCCc---------------------ccCCchHHHHhCCC-CeEEEEEcCCCCCCcCcc-----
Confidence 011111222211100 00122233444443 589999998876433221
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
+.. ++++.+.+|| ||.+- ++.+.+++.|.+-|++
T Consensus 158 --l~~------~~~~~i~lpG-gHHfd-~dy~~La~~Il~~l~~ 191 (192)
T PF06057_consen 158 --LRQ------PGVEVIALPG-GHHFD-GDYDALAKRILDALKA 191 (192)
T ss_pred --ccC------CCcEEEEcCC-CcCCC-CCHHHHHHHHHHHHhc
Confidence 111 2389999998 88765 4467777777776653
No 118
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.26 E-value=5.6e-11 Score=93.26 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=95.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCC-ceEEEEeCCCCC-----CCCCC---------CCC---------
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS-EWRMVLVDLRNH-----GRSAE---------IEG--------- 98 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~vi~~D~~G~-----G~S~~---------~~~--------- 98 (325)
.++.|+|+||++.++..|+.....|.+.+. + ++.++.+|-|-- |-... ...
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~-----~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~ 77 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALK-----KLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPD 77 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHH-----HTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHh-----hCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecC
Confidence 378899999999999999988888887764 4 788888876522 11110 000
Q ss_pred --CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchh
Q 020518 99 --LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEG 176 (325)
Q Consensus 99 --~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~ 176 (325)
......+++..+.+.+++++.+. =.-|+|+|.||.+|..++..............++-+|++++.......
T Consensus 78 ~~~~~~~~~~~sl~~l~~~i~~~GP--fdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~----- 150 (212)
T PF03959_consen 78 DDDHEYEGLDESLDYLRDYIEENGP--FDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD----- 150 (212)
T ss_dssp S-SGGG---HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE------
T ss_pred CCcccccCHHHHHHHHHHHHHhcCC--eEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh-----
Confidence 00134567777788888888772 246999999999999998654321100011257788888776421100
Q ss_pred HHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCC
Q 020518 177 EVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQ 256 (325)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (325)
+. ... .-.. .
T Consensus 151 -----------------------------------------------------------------~~--~~~-~~~~--i 160 (212)
T PF03959_consen 151 -----------------------------------------------------------------YQ--ELY-DEPK--I 160 (212)
T ss_dssp -----------------------------------------------------------------GT--TTT---TT---
T ss_pred -----------------------------------------------------------------hh--hhh-cccc--C
Confidence 00 000 0122 2
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN 310 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~ 310 (325)
++|+|.|+|.+|.+++++..+.+.+.... +.+++..++ ||.++...
T Consensus 161 ~iPtlHv~G~~D~~~~~~~s~~L~~~~~~-------~~~v~~h~g-GH~vP~~~ 206 (212)
T PF03959_consen 161 SIPTLHVIGENDPVVPPERSEALAEMFDP-------DARVIEHDG-GHHVPRKK 206 (212)
T ss_dssp --EEEEEEETT-SSS-HHHHHHHHHHHHH-------HEEEEEESS-SSS----H
T ss_pred CCCeEEEEeCCCCCcchHHHHHHHHhccC-------CcEEEEECC-CCcCcCCh
Confidence 48999999999999999888888888875 156677776 99988653
No 119
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.25 E-value=5.5e-10 Score=92.27 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=83.6
Q ss_pred cCCCCCCCceEEEecCCCCCCCChH-----HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHH--
Q 020518 37 SSSDRPYTSTAFVLHGLLGSGRNWR-----SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA-- 109 (325)
Q Consensus 37 ~~~~~~~~~~vv~~HG~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-- 109 (325)
+..+..-++|++++|-+......|+ +++..|.+ .|+.|+.+++++=..+.. ..++++++
T Consensus 100 p~~e~v~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~--------~g~~vfvIsw~nPd~~~~------~~~~edYi~e 165 (445)
T COG3243 100 PLTEKVLKRPLLIVPPWINKFYILDLSPEKSLVRWLLE--------QGLDVFVISWRNPDASLA------AKNLEDYILE 165 (445)
T ss_pred CCCCccCCCceEeeccccCceeEEeCCCCccHHHHHHH--------cCCceEEEeccCchHhhh------hccHHHHHHH
Confidence 4334446789999999988776663 57777877 899999999987655544 33455555
Q ss_pred ---HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCC-cceEEEEecCCCCC
Q 020518 110 ---NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVAL-PKQLWVLDSVPGKV 169 (325)
Q Consensus 110 ---~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~-v~~lvli~~~~~~~ 169 (325)
+.+..+.+..+.+ ++.++|+|.||.++..+++.++. + |+.++++.+...+.
T Consensus 166 ~l~~aid~v~~itg~~-~InliGyCvGGtl~~~ala~~~~--------k~I~S~T~lts~~DF~ 220 (445)
T COG3243 166 GLSEAIDTVKDITGQK-DINLIGYCVGGTLLAAALALMAA--------KRIKSLTLLTSPVDFS 220 (445)
T ss_pred HHHHHHHHHHHHhCcc-ccceeeEecchHHHHHHHHhhhh--------cccccceeeecchhhc
Confidence 4455555666778 99999999999999999999988 5 99999988765443
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.24 E-value=5.6e-10 Score=91.46 Aligned_cols=124 Identities=18% Similarity=0.121 Sum_probs=80.2
Q ss_pred cccceEEEEccc-CCCCCCCceEEEecCCCCCCCChHHHH----------HHHHhhhhccCCCCceEEEEeCCCCCCCCC
Q 020518 26 SLQTLAYEEVRS-SSDRPYTSTAFVLHGLLGSGRNWRSFS----------RNLASTLSQTSASSEWRMVLVDLRNHGRSA 94 (325)
Q Consensus 26 ~~~~l~y~~~~~-~~~~~~~~~vv~~HG~~~~~~~~~~~~----------~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~ 94 (325)
||.+|....+.+ ......-|+||..|+++.+...-.... ..+.+ +||.|+..|.||.|.|.
T Consensus 1 DGv~L~adv~~P~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~--------~GY~vV~~D~RG~g~S~ 72 (272)
T PF02129_consen 1 DGVRLAADVYRPGADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAE--------RGYAVVVQDVRGTGGSE 72 (272)
T ss_dssp TS-EEEEEEEEE--TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHH--------TT-EEEEEE-TTSTTS-
T ss_pred CCCEEEEEEEecCCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHh--------CCCEEEEECCcccccCC
Confidence 577888888877 223345688999999986441111111 11555 89999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH---HHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 95 EIEGLDPPHDIANAANDLANLV---KAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 95 ~~~~~~~~~~~~~~~~~l~~~l---~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.... . . ..+.++|..++| ..... +++|-++|.|++|..++.+|+..|. .+++++...+.....
T Consensus 73 G~~~--~-~-~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p--------~LkAi~p~~~~~d~~ 139 (272)
T PF02129_consen 73 GEFD--P-M-SPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPP--------HLKAIVPQSGWSDLY 139 (272)
T ss_dssp S-B---T-T-SHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-T--------TEEEEEEESE-SBTC
T ss_pred Cccc--c-C-ChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCC--------CceEEEecccCCccc
Confidence 8653 1 1 444555544444 44332 2389999999999999999998887 899999987764433
No 121
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.21 E-value=5.1e-09 Score=74.55 Aligned_cols=103 Identities=22% Similarity=0.217 Sum_probs=76.8
Q ss_pred CceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCC-----CCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNH-----GRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~-----G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
.-+||+-||.+.+.++ ...++..|+. .|+.|..++++-. |...+++. ...-..++...+.++.
T Consensus 14 ~~tilLaHGAGasmdSt~m~~~a~~la~--------~G~~vaRfefpYma~Rrtg~rkPp~~--~~t~~~~~~~~~aql~ 83 (213)
T COG3571 14 PVTILLAHGAGASMDSTSMTAVAAALAR--------RGWLVARFEFPYMAARRTGRRKPPPG--SGTLNPEYIVAIAQLR 83 (213)
T ss_pred CEEEEEecCCCCCCCCHHHHHHHHHHHh--------CceeEEEeecchhhhccccCCCCcCc--cccCCHHHHHHHHHHH
Confidence 4579999999887654 4567777776 8999999998754 32223332 3344566777777777
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+.-. +.++-|+||||-++-+++..-.- .|+++++++-+
T Consensus 84 ~~l~~g-pLi~GGkSmGGR~aSmvade~~A--------~i~~L~clgYP 123 (213)
T COG3571 84 AGLAEG-PLIIGGKSMGGRVASMVADELQA--------PIDGLVCLGYP 123 (213)
T ss_pred hcccCC-ceeeccccccchHHHHHHHhhcC--------CcceEEEecCc
Confidence 777666 99999999999999999987655 68999988843
No 122
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.19 E-value=2.3e-09 Score=80.85 Aligned_cols=188 Identities=17% Similarity=0.101 Sum_probs=116.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC----CCCCC--------CCC-------------
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN----HGRSA--------EIE------------- 97 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G----~G~S~--------~~~------------- 97 (325)
.++-|+|+||+-.+...|..-...+.+.+. +-+.++.+|-|- -+.+. .+.
T Consensus 4 ~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~-----k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n 78 (230)
T KOG2551|consen 4 KKLRVLCLHGFRQSGKVFSEKTGSLRKLLK-----KLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNN 78 (230)
T ss_pred CCceEEEecchhhccHHHHHHhhhHHHHHH-----hhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhccc
Confidence 467899999999999888765444444442 346777777762 01111 010
Q ss_pred --CCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCch
Q 020518 98 --GLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSE 175 (325)
Q Consensus 98 --~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~ 175 (325)
.......+++-.+.|.+.+.+.|+= --|+|.|-|+.++..++...+.+..-.....++-+|++++.......
T Consensus 79 ~~~~~~~~~~eesl~yl~~~i~enGPF--DGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~---- 152 (230)
T KOG2551|consen 79 EASFTEYFGFEESLEYLEDYIKENGPF--DGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKK---- 152 (230)
T ss_pred ccccccccChHHHHHHHHHHHHHhCCC--ccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcch----
Confidence 0002234566677788888888731 25899999999999998833221111112245667777765311000
Q ss_pred hHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCC
Q 020518 176 GEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPP 255 (325)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (325)
. + ......+
T Consensus 153 ------~---------------------------------------------------------------~--~~~~~~~ 161 (230)
T KOG2551|consen 153 ------L---------------------------------------------------------------D--ESAYKRP 161 (230)
T ss_pred ------h---------------------------------------------------------------h--hhhhccC
Confidence 0 0 0001112
Q ss_pred CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 256 QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 256 ~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.++|.|.|.|+.|.+++...++.+.+...+ ..+..-+| ||+++-.. ...+.|.+||+
T Consensus 162 i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~--------a~vl~Hpg-gH~VP~~~--~~~~~i~~fi~ 218 (230)
T KOG2551|consen 162 LSTPSLHIFGETDTIVPSERSEQLAESFKD--------ATVLEHPG-GHIVPNKA--KYKEKIADFIQ 218 (230)
T ss_pred CCCCeeEEecccceeecchHHHHHHHhcCC--------CeEEecCC-CccCCCch--HHHHHHHHHHH
Confidence 348999999999999999888888888886 66666675 99998754 55556666654
No 123
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.19 E-value=1e-08 Score=85.84 Aligned_cols=124 Identities=20% Similarity=0.158 Sum_probs=80.5
Q ss_pred ccceEEEEccc-CCCCCCCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRS-SSDRPYTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPP 102 (325)
Q Consensus 27 ~~~l~y~~~~~-~~~~~~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~ 102 (325)
+..+.++.+.+ .......|+||++||.+... .....++..+... .|+.|+++|+|-.-.-. ..
T Consensus 61 ~~~~~~~~y~p~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~-------~g~~vv~vdYrlaPe~~------~p 127 (312)
T COG0657 61 GDGVPVRVYRPDRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAA-------AGAVVVSVDYRLAPEHP------FP 127 (312)
T ss_pred CCceeEEEECCCCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHH-------cCCEEEecCCCCCCCCC------CC
Confidence 34456666665 23334579999999986633 3443455555443 89999999998443332 34
Q ss_pred CCHHHHHHHHHHHHHH---hC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 103 HDIANAANDLANLVKA---KG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 103 ~~~~~~~~~l~~~l~~---~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
..+++..+.+.-+.++ ++ .+ ++.++|+|.||.+++.++..-.+. ........+++.+....
T Consensus 128 ~~~~d~~~a~~~l~~~~~~~g~dp~-~i~v~GdSAGG~La~~~a~~~~~~----~~~~p~~~~li~P~~d~ 193 (312)
T COG0657 128 AALEDAYAAYRWLRANAAELGIDPS-RIAVAGDSAGGHLALALALAARDR----GLPLPAAQVLISPLLDL 193 (312)
T ss_pred chHHHHHHHHHHHHhhhHhhCCCcc-ceEEEecCcccHHHHHHHHHHHhc----CCCCceEEEEEecccCC
Confidence 4555544444444433 33 45 899999999999999999876541 01146888888887544
No 124
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.18 E-value=4.8e-09 Score=96.86 Aligned_cols=77 Identities=10% Similarity=0.025 Sum_probs=57.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-------------------CCCCEEEEEeChhHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG-------------------WDWPDVVIGHSMGGKVAL 138 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~-------------------~~~~~~lvGhS~Gg~~a~ 138 (325)
+||.|+..|.||+|.|..... ... .+..+|..++|+-+. .+++|.++|.|+||.+++
T Consensus 278 rGYaVV~~D~RGtg~SeG~~~---~~~-~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~ 353 (767)
T PRK05371 278 RGFAVVYVSGIGTRGSDGCPT---TGD-YQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLPN 353 (767)
T ss_pred CCeEEEEEcCCCCCCCCCcCc---cCC-HHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHHH
Confidence 899999999999999988542 221 333444444443332 024999999999999999
Q ss_pred HHHHHccccccCCccCCcceEEEEecCC
Q 020518 139 HFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 139 ~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+|...|. .++.+|.+++..
T Consensus 354 ~aAa~~pp--------~LkAIVp~a~is 373 (767)
T PRK05371 354 AVATTGVE--------GLETIIPEAAIS 373 (767)
T ss_pred HHHhhCCC--------cceEEEeeCCCC
Confidence 99999888 899999877653
No 125
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.16 E-value=4e-09 Score=82.06 Aligned_cols=121 Identities=20% Similarity=0.140 Sum_probs=77.5
Q ss_pred eEEEEcccCCCC-CCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCC------CCCCC
Q 020518 30 LAYEEVRSSSDR-PYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAE------IEGLD 100 (325)
Q Consensus 30 l~y~~~~~~~~~-~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~------~~~~~ 100 (325)
|.|+.|-++... ...|.||++||.+++...+... ...+++. .||-|+.++......... .....
T Consensus 1 l~Y~lYvP~~~~~~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~-------~GfivvyP~~~~~~~~~~cw~w~~~~~~~ 73 (220)
T PF10503_consen 1 LSYRLYVPPGAPRGPVPLVVVLHGCGQSAEDFAAGSGWNALADR-------EGFIVVYPEQSRRANPQGCWNWFSDDQQR 73 (220)
T ss_pred CcEEEecCCCCCCCCCCEEEEeCCCCCCHHHHHhhcCHHHHhhc-------CCeEEEcccccccCCCCCccccccccccc
Confidence 457777665332 2458899999999988766542 3456654 788999888542111110 00000
Q ss_pred CCCCHHHHHHHHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 101 PPHDIANAANDLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.......++..+..+..+.. .+ +|++.|+|.||+.+..++..+|+ .+.++...++.+
T Consensus 74 g~~d~~~i~~lv~~v~~~~~iD~~-RVyv~G~S~Gg~ma~~la~~~pd--------~faa~a~~sG~~ 132 (220)
T PF10503_consen 74 GGGDVAFIAALVDYVAARYNIDPS-RVYVTGLSNGGMMANVLACAYPD--------LFAAVAVVSGVP 132 (220)
T ss_pred CccchhhHHHHHHhHhhhcccCCC-ceeeEEECHHHHHHHHHHHhCCc--------cceEEEeecccc
Confidence 11122223333344444444 45 89999999999999999999999 999988888764
No 126
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=99.15 E-value=3.4e-09 Score=83.43 Aligned_cols=99 Identities=19% Similarity=0.249 Sum_probs=73.1
Q ss_pred EecCCC--CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 49 VLHGLL--GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 49 ~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
++|+.+ ++...|..+...|. ..+.|+++|++|++.+... ..+++++++.+...+......++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~---------~~~~v~~~~~~g~~~~~~~-----~~~~~~~~~~~~~~l~~~~~~~~~~ 67 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALR---------GRRDVSALPLPGFGPGEPL-----PASADALVEAQAEAVLRAAGGRPFV 67 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcC---------CCccEEEecCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhcCCCCeE
Confidence 455544 55667888888777 6689999999999876553 4577888887766655543333899
Q ss_pred EEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 127 VIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++|||+||.++...+.+..+ ....+.+++++++..
T Consensus 68 l~g~s~Gg~~a~~~a~~l~~-----~~~~~~~l~~~~~~~ 102 (212)
T smart00824 68 LVGHSSGGLLAHAVAARLEA-----RGIPPAAVVLLDTYP 102 (212)
T ss_pred EEEECHHHHHHHHHHHHHHh-----CCCCCcEEEEEccCC
Confidence 99999999999999987543 011789999998754
No 127
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.13 E-value=3.1e-09 Score=79.67 Aligned_cols=179 Identities=20% Similarity=0.255 Sum_probs=119.3
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC-----CCC----------CCCCCCCHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA-----EIE----------GLDPPHDIANA 108 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~-----~~~----------~~~~~~~~~~~ 108 (325)
..+||++||.+.+...|..++..|.- ++...|++.-|-.-.+. .+. .......+...
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l--------~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~a 74 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPL--------PNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRA 74 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCC--------CCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHH
Confidence 46899999999999999888877654 77788877544221110 000 00023345566
Q ss_pred HHHHHHHHHHh---C--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHH
Q 020518 109 ANDLANLVKAK---G--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQ 183 (325)
Q Consensus 109 ~~~l~~~l~~~---~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~ 183 (325)
++.+..++++. + .+ ++.+-|.|+||++++..+..+|. .+.+++-..+.......
T Consensus 75 a~~i~~Li~~e~~~Gi~~~-rI~igGfs~G~a~aL~~~~~~~~--------~l~G~~~~s~~~p~~~~------------ 133 (206)
T KOG2112|consen 75 ADNIANLIDNEPANGIPSN-RIGIGGFSQGGALALYSALTYPK--------ALGGIFALSGFLPRASI------------ 133 (206)
T ss_pred HHHHHHHHHHHHHcCCCcc-ceeEcccCchHHHHHHHHhcccc--------ccceeeccccccccchh------------
Confidence 77777777654 3 24 78999999999999999999987 67776655544221100
Q ss_pred HhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEE
Q 020518 184 TLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIV 263 (325)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i 263 (325)
.+..| ....+ .+|++..
T Consensus 134 --------------------------~~~~~------------------------------------~~~~~-~~~i~~~ 150 (206)
T KOG2112|consen 134 --------------------------GLPGW------------------------------------LPGVN-YTPILLC 150 (206)
T ss_pred --------------------------hccCC------------------------------------ccccC-cchhhee
Confidence 00000 00000 3689999
Q ss_pred eeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHH
Q 020518 264 RAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIV 318 (325)
Q Consensus 264 ~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i 318 (325)
+|+.|+++|-...+...+.+...... +++..+++.+|...-+.-+++...|
T Consensus 151 Hg~~d~~vp~~~g~~s~~~l~~~~~~----~~f~~y~g~~h~~~~~e~~~~~~~~ 201 (206)
T KOG2112|consen 151 HGTADPLVPFRFGEKSAQFLKSLGVR----VTFKPYPGLGHSTSPQELDDLKSWI 201 (206)
T ss_pred cccCCceeehHHHHHHHHHHHHcCCc----eeeeecCCccccccHHHHHHHHHHH
Confidence 99999999998888888888776653 8999999999987755444444333
No 128
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=99.11 E-value=8.2e-10 Score=81.89 Aligned_cols=113 Identities=13% Similarity=0.038 Sum_probs=69.8
Q ss_pred EEEEcccCCCCCCCceEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHH
Q 020518 31 AYEEVRSSSDRPYTSTAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIAN 107 (325)
Q Consensus 31 ~y~~~~~~~~~~~~~~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~ 107 (325)
....+|+. ...+..||+||.-..... ...++..+.. .||+|..+ |++.+..... -..++.+
T Consensus 57 ~VDIwg~~---~~~klfIfIHGGYW~~g~rk~clsiv~~a~~--------~gY~vasv---gY~l~~q~ht--L~qt~~~ 120 (270)
T KOG4627|consen 57 LVDIWGST---NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVR--------RGYRVASV---GYNLCPQVHT--LEQTMTQ 120 (270)
T ss_pred EEEEecCC---CCccEEEEEecchhhcCchhcccchhhhhhh--------cCeEEEEe---ccCcCccccc--HHHHHHH
Confidence 34445553 457889999997432222 2223333333 89999998 4566654211 1223444
Q ss_pred HHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 108 AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
...-+.-+++...-.+.+.+-|||.|+.+|+.+..|.-+ .+|.+++++++..
T Consensus 121 ~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~-------prI~gl~l~~GvY 172 (270)
T KOG4627|consen 121 FTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRS-------PRIWGLILLCGVY 172 (270)
T ss_pred HHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcC-------chHHHHHHHhhHh
Confidence 444444445555433267788999999999999987543 3899999988763
No 129
>PRK04940 hypothetical protein; Provisional
Probab=99.07 E-value=4.7e-08 Score=72.74 Aligned_cols=52 Identities=8% Similarity=-0.004 Sum_probs=37.3
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCce-eEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKV-SVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
..+++....|.+.+...+ .+.... + +..+.+|++|-+ +.=++....|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a---~~~y~~--------~y~~~v~~GGdH~f--~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRT---AEELHP--------YYEIVWDEEQTHKF--KNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHH---HHHhcc--------CceEEEECCCCCCC--CCHHHHHHHHHHHHh
Confidence 458899999999887543 444444 5 888889877765 334667888888875
No 130
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.03 E-value=7.9e-09 Score=87.82 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=60.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCC-CCC-CC--------------------C
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS-AEI-EG--------------------L 99 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S-~~~-~~--------------------~ 99 (325)
..-|.|||-||++++...|..++..|+. .||-|+++|+|..-.+ ... .+ .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS--------~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELAS--------HGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPL 169 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHH--------TT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHh--------CCeEEEEeccCCCceeEEEeccCCCccccccccccccccceecc
Confidence 3468899999999999999999999998 8999999999953211 000 00 0
Q ss_pred CCC---C-------CHHHHHHHHHHHHHHh--------------------------CCCCCEEEEEeChhHHHHHHHHHH
Q 020518 100 DPP---H-------DIANAANDLANLVKAK--------------------------GWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 100 ~~~---~-------~~~~~~~~l~~~l~~~--------------------------~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
... . .++.-+.++..+++.+ +.+ ++.++|||+||..++..+.+
T Consensus 170 ~~~~~~~~~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~-~i~~~GHSFGGATa~~~l~~ 248 (379)
T PF03403_consen 170 RDFDPEEEFELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLS-RIGLAGHSFGGATALQALRQ 248 (379)
T ss_dssp ----GGGHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEE-EEEEEEETHHHHHHHHHHHH
T ss_pred ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchh-heeeeecCchHHHHHHHHhh
Confidence 000 0 0111223333333222 133 69999999999999998887
Q ss_pred ccccccCCccCCcceEEEEecCC
Q 020518 144 CARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 144 ~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
. . +++..|++|++.
T Consensus 249 d-~--------r~~~~I~LD~W~ 262 (379)
T PF03403_consen 249 D-T--------RFKAGILLDPWM 262 (379)
T ss_dssp --T--------T--EEEEES---
T ss_pred c-c--------CcceEEEeCCcc
Confidence 6 3 799999999874
No 131
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.00 E-value=9.2e-10 Score=94.60 Aligned_cols=97 Identities=15% Similarity=0.124 Sum_probs=70.7
Q ss_pred CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 55 GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 55 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
.....|..+++.|.+ .||.+ ..|++|+|.+.+.... ....++++.+.+.++.++.+.. +++|+||||||
T Consensus 105 ~~~~~~~~li~~L~~--------~GY~~-~~dL~g~gYDwR~~~~-~~~~~~~Lk~lIe~~~~~~g~~-kV~LVGHSMGG 173 (440)
T PLN02733 105 DEVYYFHDMIEQLIK--------WGYKE-GKTLFGFGYDFRQSNR-LPETMDGLKKKLETVYKASGGK-KVNIISHSMGG 173 (440)
T ss_pred chHHHHHHHHHHHHH--------cCCcc-CCCcccCCCCcccccc-HHHHHHHHHHHHHHHHHHcCCC-CEEEEEECHhH
Confidence 455789999999997 77755 8999999998775310 1122344444455555556667 99999999999
Q ss_pred HHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 135 KVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 135 ~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+++.++..+|+... ..|+++|.++++.
T Consensus 174 lva~~fl~~~p~~~~----k~I~~~I~la~P~ 201 (440)
T PLN02733 174 LLVKCFMSLHSDVFE----KYVNSWIAIAAPF 201 (440)
T ss_pred HHHHHHHHHCCHhHH----hHhccEEEECCCC
Confidence 999999999886221 1589999998763
No 132
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.00 E-value=2.4e-09 Score=83.88 Aligned_cols=52 Identities=17% Similarity=0.164 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 107 NAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 107 ~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
++.+...++|.+. ..+ ++.|+|.|.||-+|+.+|.++|+ |+.+|.++++...
T Consensus 4 Eyfe~Ai~~L~~~p~v~~~-~Igi~G~SkGaelALllAs~~~~---------i~avVa~~ps~~~ 58 (213)
T PF08840_consen 4 EYFEEAIDWLKSHPEVDPD-KIGIIGISKGAELALLLASRFPQ---------ISAVVAISPSSVV 58 (213)
T ss_dssp HHHHHHHHHHHCSTTB--S-SEEEEEETHHHHHHHHHHHHSSS---------EEEEEEES--SB-
T ss_pred HHHHHHHHHHHhCCCCCCC-CEEEEEECHHHHHHHHHHhcCCC---------ccEEEEeCCceeE
Confidence 3455556666554 235 89999999999999999999995 9999999987533
No 133
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.00 E-value=1.3e-09 Score=84.23 Aligned_cols=110 Identities=23% Similarity=0.196 Sum_probs=80.4
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
..=|.|+|+||+.-....|..+..+++. .||-|+++++-.--. +.+.+...+....++++..-++++
T Consensus 44 G~yPVilF~HG~~l~ns~Ys~lL~HIAS--------HGfIVVAPQl~~~~~---p~~~~Ei~~aa~V~~WL~~gL~~~Lp 112 (307)
T PF07224_consen 44 GTYPVILFLHGFNLYNSFYSQLLAHIAS--------HGFIVVAPQLYTLFP---PDGQDEIKSAASVINWLPEGLQHVLP 112 (307)
T ss_pred CCccEEEEeechhhhhHHHHHHHHHHhh--------cCeEEEechhhcccC---CCchHHHHHHHHHHHHHHhhhhhhCC
Confidence 3458899999999999999999999997 899999999875311 221112233444455555445444
Q ss_pred -----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 120 -----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 120 -----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
++. ++.++|||.||..|..+|+.+.. ...++.||.+||..+..
T Consensus 113 ~~V~~nl~-klal~GHSrGGktAFAlALg~a~------~lkfsaLIGiDPV~G~~ 160 (307)
T PF07224_consen 113 ENVEANLS-KLALSGHSRGGKTAFALALGYAT------SLKFSALIGIDPVAGTS 160 (307)
T ss_pred CCcccccc-eEEEeecCCccHHHHHHHhcccc------cCchhheecccccCCCC
Confidence 345 89999999999999999998742 13789999999986554
No 134
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=98.97 E-value=4.1e-08 Score=74.28 Aligned_cols=192 Identities=16% Similarity=0.129 Sum_probs=118.4
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCC-CCCCCCCCCCCC-----C
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDL-RNHGRSAEIEGL-----D 100 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~-~G~G~S~~~~~~-----~ 100 (325)
..+.-+..|+.. ++..||++--+.+.. ..-+..++.++. .||.|+.+|+ +|--.|...... -
T Consensus 26 ~gldaYv~gs~~---~~~~li~i~DvfG~~~~n~r~~Adk~A~--------~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~ 94 (242)
T KOG3043|consen 26 GGLDAYVVGSTS---SKKVLIVIQDVFGFQFPNTREGADKVAL--------NGYTVLVPDFFRGDPWSPSLQKSERPEWM 94 (242)
T ss_pred cCeeEEEecCCC---CCeEEEEEEeeeccccHHHHHHHHHHhc--------CCcEEEcchhhcCCCCCCCCChhhhHHHH
Confidence 344444455542 245666666554433 335566777775 8999999996 441111110000 0
Q ss_pred CCCCHHHHHHH---HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhH
Q 020518 101 PPHDIANAAND---LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGE 177 (325)
Q Consensus 101 ~~~~~~~~~~~---l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~ 177 (325)
...+..-.-.+ +..+|+..+...++-++|.+|||.++..+....|+ +.+.+.+-|.....
T Consensus 95 ~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv~~~~~~~~---------f~a~v~~hps~~d~-------- 157 (242)
T KOG3043|consen 95 KGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVVTLSAKDPE---------FDAGVSFHPSFVDS-------- 157 (242)
T ss_pred hcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEEEeeccchh---------heeeeEecCCcCCh--------
Confidence 11122222233 34444455644489999999999999998888775 66666655442110
Q ss_pred HHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCC
Q 020518 178 VEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQG 257 (325)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (325)
..+..++
T Consensus 158 -----------------------------------------------------------------------~D~~~vk-- 164 (242)
T KOG3043|consen 158 -----------------------------------------------------------------------ADIANVK-- 164 (242)
T ss_pred -----------------------------------------------------------------------hHHhcCC--
Confidence 0112223
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-----cCh------HHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-----DNP------KGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-----e~p------~~~~~~i~~fl~ 323 (325)
+|++++.++.|..+++.....+.+.+...+.. ..++.++++.+|-.+. +.| |+..+.+.+|+.
T Consensus 165 ~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~---~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~ 238 (242)
T KOG3043|consen 165 APILFLFAELDEDVPPKDVKAWEEKLKENPAV---GSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFK 238 (242)
T ss_pred CCEEEEeecccccCCHHHHHHHHHHHhcCccc---ceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999988876653 2579999999997763 344 344455555554
No 135
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.90 E-value=5.7e-09 Score=86.08 Aligned_cols=120 Identities=18% Similarity=0.170 Sum_probs=64.8
Q ss_pred cceEEEEcccCCCCCCCceEEEecCCCCCCCC--------------h----HHHHHHHHhhhhccCCCCceEEEEeCCCC
Q 020518 28 QTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRN--------------W----RSFSRNLASTLSQTSASSEWRMVLVDLRN 89 (325)
Q Consensus 28 ~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~--------------~----~~~~~~l~~~~~~~~~~~~~~vi~~D~~G 89 (325)
.++.....-+.+-...-|.||++||-++..+. + ..+...|++ .||-|+++|.+|
T Consensus 99 ~~vpaylLvPd~~~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk--------~GYVvla~D~~g 170 (390)
T PF12715_consen 99 SRVPAYLLVPDGAKGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAK--------RGYVVLAPDALG 170 (390)
T ss_dssp B-EEEEEEEETT--S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHT--------TTSEEEEE--TT
T ss_pred eeEEEEEEecCCCCCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHh--------CCCEEEEEcccc
Confidence 34443333333223456899999998764311 1 124666776 899999999999
Q ss_pred CCCCCCCCCCC--CCCCHHHHHH---------------HHHHHHHHh------CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 90 HGRSAEIEGLD--PPHDIANAAN---------------DLANLVKAK------GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 90 ~G~S~~~~~~~--~~~~~~~~~~---------------~l~~~l~~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+|......... ..++...++. |....++.+ +.+ +|.++|+||||..++.+|+..+
T Consensus 171 ~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~-RIG~~GfSmGg~~a~~LaALDd- 248 (390)
T PF12715_consen 171 FGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPD-RIGCMGFSMGGYRAWWLAALDD- 248 (390)
T ss_dssp SGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEE-EEEEEEEGGGHHHHHHHHHH-T-
T ss_pred ccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCcc-ceEEEeecccHHHHHHHHHcch-
Confidence 99876544211 1222223222 112223332 345 8999999999999999999865
Q ss_pred cccCCccCCcceEEEEecC
Q 020518 147 ADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 147 ~~~~~~~~~v~~lvli~~~ 165 (325)
+|+..|..+..
T Consensus 249 --------RIka~v~~~~l 259 (390)
T PF12715_consen 249 --------RIKATVANGYL 259 (390)
T ss_dssp --------T--EEEEES-B
T ss_pred --------hhHhHhhhhhh
Confidence 68887776644
No 136
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.90 E-value=1.3e-08 Score=80.79 Aligned_cols=116 Identities=17% Similarity=0.121 Sum_probs=71.9
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
+++..+||+||+..+...-..-...+...+. -.-.++.+.+|..|.-..... ...+...-...+..+|..+
T Consensus 16 ~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~-----~~~~~i~FsWPS~g~~~~Y~~--d~~~a~~s~~~l~~~L~~L~~ 88 (233)
T PF05990_consen 16 PDKEVLVFVHGYNNSFEDALRRAAQLAHDLG-----FPGVVILFSWPSDGSLLGYFY--DRESARFSGPALARFLRDLAR 88 (233)
T ss_pred CCCeEEEEEeCCCCCHHHHHHHHHHHHHHhC-----CCceEEEEEcCCCCChhhhhh--hhhhHHHHHHHHHHHHHHHHh
Confidence 3578999999999875443333333443221 222899999998886322211 1223444455566666554
Q ss_pred --CCCCCEEEEEeChhHHHHHHHHHHccccccC-CccCCcceEEEEecC
Q 020518 120 --GWDWPDVVIGHSMGGKVALHFAQSCARADYG-QFVALPKQLWVLDSV 165 (325)
Q Consensus 120 --~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~-~~~~~v~~lvli~~~ 165 (325)
+.. ++++++||||+.+.+............ ....++..+|+++|-
T Consensus 89 ~~~~~-~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApD 136 (233)
T PF05990_consen 89 APGIK-RIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPD 136 (233)
T ss_pred ccCCc-eEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCC
Confidence 456 999999999999999987664331110 011267888888754
No 137
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.89 E-value=1.1e-09 Score=85.03 Aligned_cols=90 Identities=17% Similarity=0.318 Sum_probs=53.0
Q ss_pred ceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceE---EEEeCCCCCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHh
Q 020518 45 STAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWR---MVLVDLRNHGRSAEIEGLD-PPHDIANAANDLANLVKAK 119 (325)
Q Consensus 45 ~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~---vi~~D~~G~G~S~~~~~~~-~~~~~~~~~~~l~~~l~~~ 119 (325)
.||||+||.++ ....|..+.+.|.+ +||. ++++++-....+....... ...+..++++-|.+++++.
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~--------~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~T 73 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKA--------AGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYT 73 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHH--------TT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHH
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHH--------cCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhh
Confidence 58999999998 66899999999998 9999 7999884333322111000 0111233444444444555
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+ . +|.||||||||.++..+....
T Consensus 74 G-a-kVDIVgHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 74 G-A-KVDIVGHSMGGTIARYYIKGG 96 (219)
T ss_dssp T----EEEEEETCHHHHHHHHHHHC
T ss_pred C-C-EEEEEEcCCcCHHHHHHHHHc
Confidence 6 4 899999999999998888643
No 138
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.89 E-value=2.8e-07 Score=71.12 Aligned_cols=217 Identities=13% Similarity=0.111 Sum_probs=124.5
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC----CCCCCCCC--------CCCCCCHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH----GRSAEIEG--------LDPPHDIANAAND 111 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~----G~S~~~~~--------~~~~~~~~~~~~~ 111 (325)
.-|.||+||.+++..+....+..|..... ..+.-=++.+|--|- |.=++... .....+..++...
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~---~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~w 121 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYK---AGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKW 121 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhccc---ccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHH
Confidence 34789999999999999999988885220 001112445555551 11111110 0134566777888
Q ss_pred HHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 112 LANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 112 l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
+..++..| +++ .+.+|||||||.-...|+..+.. ......+.++|.++++.. .......
T Consensus 122 lk~~msyL~~~Y~i~-k~n~VGhSmGg~~~~~Y~~~yg~---dks~P~lnK~V~l~gpfN-~~~l~~d------------ 184 (288)
T COG4814 122 LKKAMSYLQKHYNIP-KFNAVGHSMGGLGLTYYMIDYGD---DKSLPPLNKLVSLAGPFN-VGNLVPD------------ 184 (288)
T ss_pred HHHHHHHHHHhcCCc-eeeeeeeccccHHHHHHHHHhcC---CCCCcchhheEEeccccc-ccccCCC------------
Confidence 88877665 678 99999999999999999988754 112236899999997643 1000000
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
+...+..... .. .. ......++. .....+..++-+++|.|+-
T Consensus 185 ---------------------e~v~~v~~~~-----~~---~~-~t~y~~y~~--------~n~k~v~~~~evl~IaGDl 226 (288)
T COG4814 185 ---------------------ETVTDVLKDG-----PG---LI-KTPYYDYIA--------KNYKKVSPNTEVLLIAGDL 226 (288)
T ss_pred ---------------------cchheeeccC-----cc---cc-CcHHHHHHH--------hcceeCCCCcEEEEEeccc
Confidence 0000000000 00 00 000000000 1123344557889999986
Q ss_pred C------CCCChHHHHHHHHHhhhcCCCCCCceeEEEec--CCCccccccChHHHHHHHHHHHh
Q 020518 268 S------DRWDPDVIQRLEGLANRQGDGSEGKVSVHVLP--NAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 268 D------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
| ..+|...+-....++...++. ..-.+++ ++-|.-+.|+|. +++.+..||-
T Consensus 227 ~dg~~tDG~Vp~assls~~~lf~~~~ks----y~e~~~~Gk~a~Hs~lhen~~-v~~yv~~FLw 285 (288)
T COG4814 227 DDGKQTDGAVPWASSLSIYHLFKKNGKS----YIESLYKGKDARHSKLHENPT-VAKYVKNFLW 285 (288)
T ss_pred ccCCcCCCceechHhHHHHHHhccCcce----eEEEeeeCCcchhhccCCChh-HHHHHHHHhh
Confidence 6 456666666677777765442 3333454 478988888765 6667778874
No 139
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.87 E-value=1.6e-07 Score=72.10 Aligned_cols=113 Identities=16% Similarity=0.130 Sum_probs=85.6
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC---CCC---CCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA---EIE---GLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~---~~~---~~~~~~~~~~~~~~l~~~ 115 (325)
.+++.+++++|.+|....|..+...|...+. +.++++.+-.-||-.-. ... .....+++++.++.=.++
T Consensus 27 ~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~-----~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaF 101 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGFYTEFARHLHLNLI-----DRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAF 101 (301)
T ss_pred CCceEEEEecCCCCchhHHHHHHHHHHHhcc-----cccceeEEeccccccCCcccccccccccccccchhhHHHHHHHH
Confidence 4588899999999999999999999886542 44678988888886543 111 112578999999999999
Q ss_pred HHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 116 VKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 116 l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+++.-+ +.+++++|||-|+++.+........ .-.|.+.+++-|.
T Consensus 102 ik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~------~~~vqKa~~LFPT 146 (301)
T KOG3975|consen 102 IKEYVPKDRKIYIIGHSIGAYMVLQILPSIKL------VFSVQKAVLLFPT 146 (301)
T ss_pred HHHhCCCCCEEEEEecchhHHHHHHHhhhccc------ccceEEEEEecch
Confidence 987743 3489999999999999998874322 1267888887765
No 140
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.86 E-value=3.5e-09 Score=88.08 Aligned_cols=114 Identities=19% Similarity=0.263 Sum_probs=64.7
Q ss_pred CCCCceEEEecCCCCCC--CChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSG--RNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~--~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
+.++|++|++|||.++. ..|.. +...+.+.. +.++.||++|+...-...-.. .......+.+.|..+|.
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~-----~~d~NVI~VDWs~~a~~~Y~~---a~~n~~~vg~~la~~l~ 139 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKD-----TGDYNVIVVDWSRGASNNYPQ---AVANTRLVGRQLAKFLS 139 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC-------S-EEEEEEE-HHHHSS-HHH---HHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhc-----cCCceEEEEcchhhccccccc---hhhhHHHHHHHHHHHHH
Confidence 46789999999998877 45654 455454421 037999999995322110000 01122333444444443
Q ss_pred Hh------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 118 AK------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 118 ~~------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.+ ..+ +++|||||+||.+|-.++..... ..+|.+++.+||+.+..
T Consensus 140 ~L~~~~g~~~~-~ihlIGhSLGAHvaG~aG~~~~~------~~ki~rItgLDPAgP~F 190 (331)
T PF00151_consen 140 FLINNFGVPPE-NIHLIGHSLGAHVAGFAGKYLKG------GGKIGRITGLDPAGPLF 190 (331)
T ss_dssp HHHHHH---GG-GEEEEEETCHHHHHHHHHHHTTT---------SSEEEEES-B-TTT
T ss_pred HHHhhcCCChh-HEEEEeeccchhhhhhhhhhccC------cceeeEEEecCcccccc
Confidence 32 346 89999999999999998887653 12799999999985443
No 141
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.85 E-value=1.5e-07 Score=86.85 Aligned_cols=223 Identities=16% Similarity=0.105 Sum_probs=135.8
Q ss_pred cccceEEEEcccCCCC--CCCceEEEecCCCCCC-------CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGSG-------RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
+|....+...-|+.-+ ..=|.||.+||.+++. -.|..+ .... .|+.|+.+|.||-|.....
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~--~~s~--------~g~~v~~vd~RGs~~~G~~ 575 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEV--VVSS--------RGFAVLQVDGRGSGGYGWD 575 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHH--hhcc--------CCeEEEEEcCCCcCCcchh
Confidence 6667777776664322 2336678889988733 233333 1233 7999999999998765432
Q ss_pred C-----CCCCCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCC
Q 020518 97 E-----GLDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVK 170 (325)
Q Consensus 97 ~-----~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~ 170 (325)
- ..-.....+++...+..+++..-++ .++.+.|+|.||.+++..+...|+ ..++..+.++|.....-
T Consensus 576 ~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~-------~~fkcgvavaPVtd~~~ 648 (755)
T KOG2100|consen 576 FRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPG-------DVFKCGVAVAPVTDWLY 648 (755)
T ss_pred HHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcC-------ceEEEEEEecceeeeee
Confidence 1 1013456777777777777765333 279999999999999999999985 13444488887643221
Q ss_pred CCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCccccc
Q 020518 171 TENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPL 250 (325)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (325)
...... + +++..... . ... |........
T Consensus 649 yds~~t--e---------------------------------rymg~p~~--~--------~~~-------y~e~~~~~~ 676 (755)
T KOG2100|consen 649 YDSTYT--E---------------------------------RYMGLPSE--N--------DKG-------YEESSVSSP 676 (755)
T ss_pred eccccc--H---------------------------------hhcCCCcc--c--------cch-------hhhccccch
Confidence 000000 0 00000000 0 000 111112222
Q ss_pred ccCCCCCCc-EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccCh-HHHHHHHHHHHh
Q 020518 251 LEHPPQGME-IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNP-KGLLEIVAPRIA 323 (325)
Q Consensus 251 ~~~~~~~~P-~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p-~~~~~~i~~fl~ 323 (325)
+..++ .| .|+|+|..|+.+..+....+.+.+...+. ..+..++|+.+|.+..-.. ..+...+..|+.
T Consensus 677 ~~~~~--~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv----~~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 677 ANNIK--TPKLLLIHGTEDDNVHFQQSAILIKALQNAGV----PFRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred hhhhc--cCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCC----ceEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 23333 23 49999999999998888777777766554 2899999999999876443 566667777765
No 142
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=98.83 E-value=8.1e-08 Score=83.98 Aligned_cols=140 Identities=19% Similarity=0.111 Sum_probs=86.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhc-----------cCCCCceEEEEeCCC-CCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQ-----------TSASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~~~vi~~D~~-G~G~S 93 (325)
.+..++|.-+.......+.|.||++.|.++++..|..+.+ .....-+ .+-++..+++.+|.| |.|.|
T Consensus 22 ~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS 100 (415)
T PF00450_consen 22 ENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMWGLFGE-NGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFS 100 (415)
T ss_dssp TTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THHHHHCT-TSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-
T ss_pred CCcEEEEEEEEeCCCCCCccEEEEecCCceeccccccccc-cCceEEeecccccccccccccccccceEEEeecCceEEe
Confidence 5678888888776666778999999999998887743322 1100000 011244689999955 99999
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEec
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDS 164 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~ 164 (325)
..........+.++.++++..+|+.. .-. +++|.|.|+||..+-.+|.+--+.... .....++++++.++
T Consensus 101 ~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng 179 (415)
T PF00450_consen 101 YGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSN-PLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNG 179 (415)
T ss_dssp EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTS-EEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE
T ss_pred eccccccccchhhHHHHHHHHHHHHhhhhhhhccCC-CEEEEccccccccchhhHHhhhhccccccccccccccceecCc
Confidence 87654212457899999998888765 334 899999999999887777553221110 00135889998887
Q ss_pred CCC
Q 020518 165 VPG 167 (325)
Q Consensus 165 ~~~ 167 (325)
...
T Consensus 180 ~~d 182 (415)
T PF00450_consen 180 WID 182 (415)
T ss_dssp -SB
T ss_pred ccc
Confidence 643
No 143
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.82 E-value=3.2e-07 Score=75.44 Aligned_cols=48 Identities=17% Similarity=0.171 Sum_probs=40.4
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC-CCCCCceeEEEecCCCccccc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG-DGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~gH~~~~ 308 (325)
++|+++.+|..|.++|+...+.+.+.....+ . +++++.+++.+|....
T Consensus 219 ~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a----~V~~~~~~~~~H~~~~ 267 (290)
T PF03583_consen 219 TVPVLIYQGTADEVVPPADTDALVAKWCAAGGA----DVEYVRYPGGGHLGAA 267 (290)
T ss_pred CCCEEEEecCCCCCCChHHHHHHHHHHHHcCCC----CEEEEecCCCChhhhh
Confidence 5899999999999999988888877777766 3 3999999999998643
No 144
>PLN02606 palmitoyl-protein thioesterase
Probab=98.80 E-value=3.6e-07 Score=73.50 Aligned_cols=102 Identities=15% Similarity=0.139 Sum_probs=67.3
Q ss_pred CceEEEecCCC--CCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---
Q 020518 44 TSTAFVLHGLL--GSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA--- 118 (325)
Q Consensus 44 ~~~vv~~HG~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~--- 118 (325)
..|||+.||++ ++...+..+...+.+. .++.+..+. .|-+.. .+ ....+.+.++.+.+-+..
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~-------~~~pg~~v~-ig~~~~---~s--~~~~~~~Qv~~vce~l~~~~~ 92 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINH-------SGYPGTCVE-IGNGVQ---DS--LFMPLRQQASIACEKIKQMKE 92 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhC-------CCCCeEEEE-ECCCcc---cc--cccCHHHHHHHHHHHHhcchh
Confidence 56899999999 5555677777766521 355444444 232211 11 223455666655555543
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+. + -+++||+|-||.++-.++.+.|+ ...|+.+|.++++-
T Consensus 93 L~-~-G~naIGfSQGglflRa~ierc~~------~p~V~nlISlggph 132 (306)
T PLN02606 93 LS-E-GYNIVAESQGNLVARGLIEFCDN------APPVINYVSLGGPH 132 (306)
T ss_pred hc-C-ceEEEEEcchhHHHHHHHHHCCC------CCCcceEEEecCCc
Confidence 22 3 69999999999999999999976 01599999999763
No 145
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=98.77 E-value=9.7e-08 Score=78.37 Aligned_cols=95 Identities=20% Similarity=0.198 Sum_probs=66.3
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--CCCCCCCCCC---CCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--GRSAEIEGLD---PPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--G~S~~~~~~~---~~~~~~~~~~~l~~~l~ 117 (325)
.-|.|++-||.++....|..+.+.+++ .||-|.++|.+|- |......... ...-+.+-..|+..+|+
T Consensus 70 ~~PlvvlshG~Gs~~~~f~~~A~~lAs--------~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd 141 (365)
T COG4188 70 LLPLVVLSHGSGSYVTGFAWLAEHLAS--------YGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLD 141 (365)
T ss_pred cCCeEEecCCCCCCccchhhhHHHHhh--------CceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHH
Confidence 468899999999999999999999998 8999999999994 3333221100 11112233333333332
Q ss_pred H-------------hCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 118 A-------------KGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 118 ~-------------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
. ++.. +|.++|||+||..++..+.-..+
T Consensus 142 ~L~~~~~sP~l~~~ld~~-~Vgv~GhS~GG~T~m~laGA~~~ 182 (365)
T COG4188 142 ALLQLTASPALAGRLDPQ-RVGVLGHSFGGYTAMELAGAELD 182 (365)
T ss_pred HHHHhhcCcccccccCcc-ceEEEecccccHHHHHhcccccc
Confidence 2 2345 89999999999999999876544
No 146
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=98.75 E-value=5.4e-06 Score=70.93 Aligned_cols=73 Identities=16% Similarity=0.164 Sum_probs=57.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQF 152 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~ 152 (325)
.|+.|+.+.+. +.+. ...++++.+.....+++++ +.. +.+|+|.+-||+.++.+|+.+|+
T Consensus 99 ~GHPvYFV~F~----p~P~----pgQTl~DV~~ae~~Fv~~V~~~hp~~~-kp~liGnCQgGWa~~mlAA~~Pd------ 163 (581)
T PF11339_consen 99 AGHPVYFVGFF----PEPE----PGQTLEDVMRAEAAFVEEVAERHPDAP-KPNLIGNCQGGWAAMMLAALRPD------ 163 (581)
T ss_pred cCCCeEEEEec----CCCC----CCCcHHHHHHHHHHHHHHHHHhCCCCC-CceEEeccHHHHHHHHHHhcCcC------
Confidence 79999988664 1111 5679999999888888766 234 89999999999999999999999
Q ss_pred cCCcceEEEEecCCC
Q 020518 153 VALPKQLWVLDSVPG 167 (325)
Q Consensus 153 ~~~v~~lvli~~~~~ 167 (325)
.+.-+|+-+++..
T Consensus 164 --~~gplvlaGaPls 176 (581)
T PF11339_consen 164 --LVGPLVLAGAPLS 176 (581)
T ss_pred --ccCceeecCCCcc
Confidence 8888887766543
No 147
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.70 E-value=1.8e-06 Score=69.42 Aligned_cols=234 Identities=16% Similarity=0.159 Sum_probs=123.5
Q ss_pred eEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC--
Q 020518 46 TAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD-- 122 (325)
Q Consensus 46 ~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-- 122 (325)
|||++=||.+.. ....+......+ .|++++.+-.+-...... .-.+...++.+.+.+......
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~--------~g~~il~~~~~~~~~~~~------~~~~~~~~~~l~~~l~~~~~~~~ 66 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQD--------PGFDILLVTSPPADFFWP------SKRLAPAADKLLELLSDSQSASP 66 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHh--------cCCeEEEEeCCHHHHeee------ccchHHHHHHHHHHhhhhccCCC
Confidence 456666776544 444455555555 899999887653322211 134566667676666655433
Q ss_pred CCEEEEEeChhHHHHHHHHHH-ccc-cccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHH
Q 020518 123 WPDVVIGHSMGGKVALHFAQS-CAR-ADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVN 200 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~-~p~-~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (325)
.++++-..|.||...+..... +.+ ...+.-..+++++|+ |++|......... ..+...+ +...........
T Consensus 67 ~~il~H~FSnGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~-DS~P~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~ 139 (240)
T PF05705_consen 67 PPILFHSFSNGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIF-DSCPGIPTYSSSA---RAFSAAL---PKSSPRWFVPLW 139 (240)
T ss_pred CCEEEEEEECchHHHHHHHHHHHHhcccccccccccceeEE-eCCCCccccccHH---HHHHHHc---CccchhhHHHHH
Confidence 279999999988777665542 111 001111224777775 5444333221111 1111111 111000000000
Q ss_pred HHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCCChHHHHHHH
Q 020518 201 HMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLE 280 (325)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~ 280 (325)
.+................. .. ........+ ......+..+|-++|++..|.+++.+.++...
T Consensus 140 ~~~~~~~~~~~~~~~~~~~--~~-------~~~~~~~~~---------~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~ 201 (240)
T PF05705_consen 140 PLLQFLLRLSIISYFIFGY--PD-------VQEYYRRAL---------NDFANSPSRCPRLYLYSKADPLIPWRDVEEHA 201 (240)
T ss_pred HHHHHHHHHHHHHHHHhcC--Cc-------HHHHHHHHH---------hhhhcCCCCCCeEEecCCCCcCcCHHHHHHHH
Confidence 0000000000000000000 00 001111111 12222333478999999999999999998888
Q ss_pred HHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHH
Q 020518 281 GLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRI 322 (325)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl 322 (325)
+...+.+. +++...++++.|..|+ ++|++..+.+.+|+
T Consensus 202 ~~~~~~G~----~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 202 EEARRKGW----DVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred HHHHHcCC----eEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 88877554 3888999999999998 58999999999985
No 148
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.69 E-value=4.8e-07 Score=71.44 Aligned_cols=121 Identities=14% Similarity=0.055 Sum_probs=74.7
Q ss_pred ccccceEEEEcccCCCC--CCC-ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC---CCCC---
Q 020518 25 RSLQTLAYEEVRSSSDR--PYT-STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG---RSAE--- 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~--~~~-~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G---~S~~--- 95 (325)
..|..|.|+-+.+..-+ ..- |.|||+||.+..+..-... +. .|..-++.+.|-.+ .+..
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~---l~---------sg~gaiawa~pedqcfVlAPQy~~ 236 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKV---LS---------SGIGAIAWAGPEDQCFVLAPQYNP 236 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhh---hh---------cCccceeeecccCceEEEcccccc
Confidence 45889999998874322 223 7899999999877654332 22 34444444444443 1110
Q ss_pred -CCCCC--CCCCHHHHHHHHH-HHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 96 -IEGLD--PPHDIANAANDLA-NLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 96 -~~~~~--~~~~~~~~~~~l~-~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
-.+.+ ...-.....+.+. .+.++.+++ .+++++|.|+||+-++.++.++|+ .+.+.+++++.
T Consensus 237 if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPd--------fFAaa~~iaG~ 303 (387)
T COG4099 237 IFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPD--------FFAAAVPIAGG 303 (387)
T ss_pred cccccccccchhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCch--------hhheeeeecCC
Confidence 00000 1112333344444 233344443 279999999999999999999999 99999999875
No 149
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.69 E-value=6.2e-08 Score=77.17 Aligned_cols=107 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred CCceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS-AEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S-~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
+..|||+.||++.+. ..+..+...+.+.. .|--|.+++. |-+.+ +...+ ..-.+.+.++.+.+.++.
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~------PG~yV~si~i-g~~~~~D~~~s--~f~~v~~Qv~~vc~~l~~ 74 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQH------PGTYVHSIEI-GNDPSEDVENS--FFGNVNDQVEQVCEQLAN 74 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHS------TT--EEE--S-SSSHHHHHHHH--HHSHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhC------CCceEEEEEE-CCCcchhhhhh--HHHHHHHHHHHHHHHHhh
Confidence 467899999999864 35666766666655 7888888887 32221 11100 123455666666666654
Q ss_pred hC-CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 119 KG-WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 119 ~~-~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.. +..-++++|+|-||.++-.++.++|+ ..|+.+|.++++
T Consensus 75 ~p~L~~G~~~IGfSQGgl~lRa~vq~c~~-------~~V~nlISlggp 115 (279)
T PF02089_consen 75 DPELANGFNAIGFSQGGLFLRAYVQRCND-------PPVHNLISLGGP 115 (279)
T ss_dssp -GGGTT-EEEEEETCHHHHHHHHHHH-TS-------S-EEEEEEES--
T ss_pred ChhhhcceeeeeeccccHHHHHHHHHCCC-------CCceeEEEecCc
Confidence 21 22279999999999999999999986 379999999976
No 150
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.68 E-value=4.3e-07 Score=71.96 Aligned_cols=126 Identities=20% Similarity=0.114 Sum_probs=88.0
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH--HHHHhhhhccCCCCceEEEEeCC-C------CCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS--RNLASTLSQTSASSEWRMVLVDL-R------NHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~vi~~D~-~------G~G~S~~~ 96 (325)
++.+..|..+.+.....+.|.||.+||-.++........ +.|++. .||-|+.+|- + +.+.+..+
T Consensus 43 ~g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~~~~sg~d~lAd~-------~gFlV~yPdg~~~~wn~~~~~~~~~p 115 (312)
T COG3509 43 NGLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQLHGTGWDALADR-------EGFLVAYPDGYDRAWNANGCGNWFGP 115 (312)
T ss_pred CCCccceEEEcCCCCCCCCCEEEEEecCCCChHHhhcccchhhhhcc-------cCcEEECcCccccccCCCcccccCCc
Confidence 677888888888766666788999999999886665543 556654 7899999852 2 22333222
Q ss_pred CC-CCCCCCHHHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 97 EG-LDPPHDIANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 97 ~~-~~~~~~~~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.. .....+...+++.+..++.+.+++ .+|++.|.|-||.++..+++.+|+ .+.++.++++..
T Consensus 116 ~~~~~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~--------~faa~A~VAg~~ 179 (312)
T COG3509 116 ADRRRGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPD--------IFAAIAPVAGLL 179 (312)
T ss_pred ccccCCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcc--------cccceeeeeccc
Confidence 21 001223334444555555566654 379999999999999999999999 899998888765
No 151
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.66 E-value=1.2e-06 Score=70.56 Aligned_cols=103 Identities=17% Similarity=0.156 Sum_probs=68.5
Q ss_pred CceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC-
Q 020518 44 TSTAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG- 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~- 120 (325)
..|+|+.||+|++... ...+...+ +.. .|..+.++.. |.+.. .+ ....+.+.++.+.+-+....
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~-~~~------~g~~~~~i~i---g~~~~-~s--~~~~~~~Qve~vce~l~~~~~ 91 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLL-TNL------SGSPGFCLEI---GNGVG-DS--WLMPLTQQAEIACEKVKQMKE 91 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHH-HhC------CCCceEEEEE---CCCcc-cc--ceeCHHHHHHHHHHHHhhchh
Confidence 5689999999987653 33444444 323 5667766654 33321 11 34456666666665554421
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
...-+++||+|-||.++-.++.+.|+ ...|+.+|.++++
T Consensus 92 l~~G~naIGfSQGGlflRa~ierc~~------~p~V~nlISlggp 130 (314)
T PLN02633 92 LSQGYNIVGRSQGNLVARGLIEFCDG------GPPVYNYISLAGP 130 (314)
T ss_pred hhCcEEEEEEccchHHHHHHHHHCCC------CCCcceEEEecCC
Confidence 11269999999999999999999986 0159999999976
No 152
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.64 E-value=1.3e-07 Score=79.31 Aligned_cols=103 Identities=18% Similarity=0.186 Sum_probs=81.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE---EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR---MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
..+++++||++.+...|..+...+.. .|+. ++.+++++- ....+ .....+++...+.+++...+
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~--------~g~~~~~~~~~~~~~~-~~~~~----~~~~~~ql~~~V~~~l~~~g 125 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAI--------LGWLTNGVYAFELSGG-DGTYS----LAVRGEQLFAYVDEVLAKTG 125 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcc--------hHHHhccccccccccc-CCCcc----ccccHHHHHHHHHHHHhhcC
Confidence 55899999998888999888777665 5666 888888866 11111 34566777777888888888
Q ss_pred CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 121 WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.+ ++.++||||||.++..++...+.. .+|+.++.++++-
T Consensus 126 a~-~v~LigHS~GG~~~ry~~~~~~~~------~~V~~~~tl~tp~ 164 (336)
T COG1075 126 AK-KVNLIGHSMGGLDSRYYLGVLGGA------NRVASVVTLGTPH 164 (336)
T ss_pred CC-ceEEEeecccchhhHHHHhhcCcc------ceEEEEEEeccCC
Confidence 88 999999999999999999998831 1899999999864
No 153
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=98.62 E-value=6.6e-08 Score=76.09 Aligned_cols=91 Identities=16% Similarity=0.146 Sum_probs=52.8
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHH----HHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAAND----LANLVKA 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~----l~~~l~~ 118 (325)
..-.|||+||+.++...|..+...+.... +.+.--.+...++...... ....++..++. |.+.++.
T Consensus 3 ~~hLvV~vHGL~G~~~d~~~~~~~l~~~~------~~~~~~~i~~~~~~~n~~~----T~~gI~~~g~rL~~eI~~~~~~ 72 (217)
T PF05057_consen 3 PVHLVVFVHGLWGNPADMRYLKNHLEKIP------EDLPNARIVVLGYSNNEFK----TFDGIDVCGERLAEEILEHIKD 72 (217)
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHHHhh------hhcchhhhhhhcccccccc----cchhhHHHHHHHHHHHHHhccc
Confidence 35679999999999999988877776511 1222112222222211111 22344444444 4444443
Q ss_pred hCCC-CCEEEEEeChhHHHHHHHHHH
Q 020518 119 KGWD-WPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 119 ~~~~-~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
.... .++++|||||||.++-.+...
T Consensus 73 ~~~~~~~IsfIgHSLGGli~r~al~~ 98 (217)
T PF05057_consen 73 YESKIRKISFIGHSLGGLIARYALGL 98 (217)
T ss_pred cccccccceEEEecccHHHHHHHHHH
Confidence 3322 389999999999998766553
No 154
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.62 E-value=2e-06 Score=65.11 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=74.5
Q ss_pred CceEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+--|||+-|++..-. .-..+...|.+ .+|.++-+.++.+-.-. ...++++.++|+..++++++
T Consensus 36 ~~~vvfiGGLgdgLl~~~y~~~L~~~lde--------~~wslVq~q~~Ssy~G~------Gt~slk~D~edl~~l~~Hi~ 101 (299)
T KOG4840|consen 36 SVKVVFIGGLGDGLLICLYTTMLNRYLDE--------NSWSLVQPQLRSSYNGY------GTFSLKDDVEDLKCLLEHIQ 101 (299)
T ss_pred EEEEEEEcccCCCccccccHHHHHHHHhh--------ccceeeeeecccccccc------ccccccccHHHHHHHHHHhh
Confidence 456899999988553 33456667776 88999988876322111 35678899999999999875
Q ss_pred CC---CCEEEEEeChhHHHHHHHHHH--ccccccCCccCCcceEEEEecCCC
Q 020518 121 WD---WPDVVIGHSMGGKVALHFAQS--CARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 121 ~~---~~~~lvGhS~Gg~~a~~~a~~--~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.. ..++|+|||.|+.-.+.|... .|. .+...|+.+|...
T Consensus 102 ~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r--------~iraaIlqApVSD 145 (299)
T KOG4840|consen 102 LCGFSTDVVLVGHSTGCQDIMYYLTNTTKDR--------KIRAAILQAPVSD 145 (299)
T ss_pred ccCcccceEEEecCccchHHHHHHHhccchH--------HHHHHHHhCccch
Confidence 43 279999999999999998833 233 6777777777643
No 155
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.61 E-value=1.6e-05 Score=68.66 Aligned_cols=121 Identities=17% Similarity=0.077 Sum_probs=70.7
Q ss_pred eEEEEcccCCC-CCCCceEEEecCCCCCCC-ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCCCCCCCCCCHH
Q 020518 30 LAYEEVRSSSD-RPYTSTAFVLHGLLGSGR-NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEIEGLDPPHDIA 106 (325)
Q Consensus 30 l~y~~~~~~~~-~~~~~~vv~~HG~~~~~~-~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~~~~~~~~~~~ 106 (325)
..+..|.++.. ....|.|+++||-..... .....++.|.+. +.....-++.+|..+.. ++..... ...-.+
T Consensus 194 r~v~VY~P~~y~~~~~PvlyllDG~~w~~~~~~~~~ld~li~~----g~i~P~ivV~id~~~~~~R~~el~~--~~~f~~ 267 (411)
T PRK10439 194 RRVWIYTTGDAAPEERPLAILLDGQFWAESMPVWPALDSLTHR----GQLPPAVYLLIDAIDTTHRSQELPC--NADFWL 267 (411)
T ss_pred eEEEEEECCCCCCCCCCEEEEEECHHhhhcCCHHHHHHHHHHc----CCCCceEEEEECCCCcccccccCCc--hHHHHH
Confidence 34444444321 234688999999643221 122344444431 00122446777753211 1111110 111234
Q ss_pred HHHHHHHHHHHHh-----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 107 NAANDLANLVKAK-----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 107 ~~~~~l~~~l~~~-----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.++++|.-++++. +.+ +.+|+|+||||..|+.++.++|+ ++.+++.+++.
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~-~~~IaG~S~GGl~AL~~al~~Pd--------~Fg~v~s~Sgs 322 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDAD-RTVVAGQSFGGLAALYAGLHWPE--------RFGCVLSQSGS 322 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCcc-ceEEEEEChHHHHHHHHHHhCcc--------cccEEEEeccc
Confidence 4567777777764 234 68999999999999999999999 99999999975
No 156
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=98.60 E-value=5.6e-06 Score=64.63 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=73.9
Q ss_pred ceEEEecCCCCCCCC--hHHHHHHHHhhhhccCCCCceEEEEeCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHh-
Q 020518 45 STAFVLHGLLGSGRN--WRSFSRNLASTLSQTSASSEWRMVLVDLRNHG--RSAEIEGLDPPHDIANAANDLANLVKAK- 119 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G--~S~~~~~~~~~~~~~~~~~~l~~~l~~~- 119 (325)
-|+|++||++++..+ ...+.+.+.+ . .|..|+++|. |-| .| ....+.+.++...+.+...
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~-~------~g~~v~~lei-g~g~~~s-------~l~pl~~Qv~~~ce~v~~m~ 88 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEE-L------PGSPVYCLEI-GDGIKDS-------SLMPLWEQVDVACEKVKQMP 88 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHh-C------CCCeeEEEEe-cCCcchh-------hhccHHHHHHHHHHHHhcch
Confidence 689999999998877 7778877777 3 8899999996 555 22 2334555665555555422
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
....-++++|.|-||.++-.++...++ ..|+.+|.++++
T Consensus 89 ~lsqGynivg~SQGglv~Raliq~cd~-------ppV~n~ISL~gP 127 (296)
T KOG2541|consen 89 ELSQGYNIVGYSQGGLVARALIQFCDN-------PPVKNFISLGGP 127 (296)
T ss_pred hccCceEEEEEccccHHHHHHHHhCCC-------CCcceeEeccCC
Confidence 122279999999999999999999877 479999998876
No 157
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.50 E-value=1.3e-06 Score=69.63 Aligned_cols=107 Identities=20% Similarity=0.251 Sum_probs=71.7
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC------C-CCC-----------C--C
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE------I-EGL-----------D--P 101 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~------~-~~~-----------~--~ 101 (325)
+.-|.|||-||++++...|..++-.|+. .||-|.++..|-+-.+.. + .+. . .
T Consensus 116 ~k~PvvvFSHGLggsRt~YSa~c~~LAS--------hG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~e 187 (399)
T KOG3847|consen 116 DKYPVVVFSHGLGGSRTLYSAYCTSLAS--------HGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANE 187 (399)
T ss_pred CCccEEEEecccccchhhHHHHhhhHhh--------CceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCc
Confidence 3458899999999999999999999998 899999999987643321 0 000 0 0
Q ss_pred C-C-----CHHHHHHHHH---HHHHHh------------------------CCCCCEEEEEeChhHHHHHHHHHHccccc
Q 020518 102 P-H-----DIANAANDLA---NLVKAK------------------------GWDWPDVVIGHSMGGKVALHFAQSCARAD 148 (325)
Q Consensus 102 ~-~-----~~~~~~~~l~---~~l~~~------------------------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~ 148 (325)
. . .+-.-++.+. .+|+++ .-. ++.++|||+||+.++.....+.
T Consensus 188 kef~irNeqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s-~~aViGHSFGgAT~i~~ss~~t--- 263 (399)
T KOG3847|consen 188 KEFHIRNEQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTS-QAAVIGHSFGGATSIASSSSHT--- 263 (399)
T ss_pred eeEEeeCHHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhh-hhhheeccccchhhhhhhcccc---
Confidence 0 0 0111122222 222222 122 6899999999999998888765
Q ss_pred cCCccCCcceEEEEecCC
Q 020518 149 YGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 149 ~~~~~~~v~~lvli~~~~ 166 (325)
.++..|++|.+.
T Consensus 264 ------~FrcaI~lD~WM 275 (399)
T KOG3847|consen 264 ------DFRCAIALDAWM 275 (399)
T ss_pred ------ceeeeeeeeeee
Confidence 489999999764
No 158
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.49 E-value=6.3e-05 Score=62.48 Aligned_cols=112 Identities=14% Similarity=0.204 Sum_probs=72.0
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC--CCCCC--------------CCCCCCC---
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH--GRSAE--------------IEGLDPP--- 102 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~--G~S~~--------------~~~~~~~--- 102 (325)
.....||++||.+.+. .|..++..|...+.+ .||..+++.+|.- ..... .......
T Consensus 85 ~~~G~vIilp~~g~~~-d~p~~i~~LR~~L~~----~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~ 159 (310)
T PF12048_consen 85 KPQGAVIILPDWGEHP-DWPGLIAPLRRELPD----HGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPS 159 (310)
T ss_pred CCceEEEEecCCCCCC-CcHhHHHHHHHHhhh----cCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCc
Confidence 3466899999998866 566666666655544 8999999998871 10000 0000000
Q ss_pred -------CCHHHH----HHH---HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 103 -------HDIANA----AND---LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 103 -------~~~~~~----~~~---l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.....+ ..- +.+++...+.. +++||||+.|+..++.|....+. ..+.++|+|++-.
T Consensus 160 ~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~~~~-~ivlIg~G~gA~~~~~~la~~~~-------~~~daLV~I~a~~ 229 (310)
T PF12048_consen 160 PASAQEAEAREAYEERLFARIEAAIAFAQQQGGK-NIVLIGHGTGAGWAARYLAEKPP-------PMPDALVLINAYW 229 (310)
T ss_pred cccccHhHHhHHHHHHHHHHHHHHHHHHHhcCCc-eEEEEEeChhHHHHHHHHhcCCC-------cccCeEEEEeCCC
Confidence 111122 222 23333344545 69999999999999999999876 3589999999753
No 159
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=98.48 E-value=1.1e-06 Score=71.26 Aligned_cols=90 Identities=17% Similarity=0.151 Sum_probs=67.0
Q ss_pred CCCceEEEecCCCCCCCCh------HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNW------RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~------~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
.+...+++.-|.++.-+.. ...+..+++. .+-+|+.+++||.|.|.... +.++++.|..+.
T Consensus 135 ~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~-------~~aNvl~fNYpGVg~S~G~~------s~~dLv~~~~a~ 201 (365)
T PF05677_consen 135 KPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKE-------LGANVLVFNYPGVGSSTGPP------SRKDLVKDYQAC 201 (365)
T ss_pred CCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHH-------cCCcEEEECCCccccCCCCC------CHHHHHHHHHHH
Confidence 4577899999988866551 1234444443 57799999999999998753 468888887777
Q ss_pred HHHh-----C--CCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 116 VKAK-----G--WDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 116 l~~~-----~--~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
++.+ | .+ .+++.|||+||.++..++.++.
T Consensus 202 v~yL~d~~~G~ka~-~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 202 VRYLRDEEQGPKAK-NIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred HHHHHhcccCCChh-eEEEeeccccHHHHHHHHHhcc
Confidence 7665 2 24 7999999999999998776654
No 160
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.46 E-value=1e-06 Score=71.07 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=71.5
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHhCC
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL-VKAKGW 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~-l~~~~~ 121 (325)
....|||+-|..+-.+. .++..-.+ .||.|+.+++||++.|...+. ...-.+.++.+.++ ++.++.
T Consensus 242 gq~LvIC~EGNAGFYEv--G~m~tP~~--------lgYsvLGwNhPGFagSTG~P~---p~n~~nA~DaVvQfAI~~Lgf 308 (517)
T KOG1553|consen 242 GQDLVICFEGNAGFYEV--GVMNTPAQ--------LGYSVLGWNHPGFAGSTGLPY---PVNTLNAADAVVQFAIQVLGF 308 (517)
T ss_pred CceEEEEecCCccceEe--eeecChHH--------hCceeeccCCCCccccCCCCC---cccchHHHHHHHHHHHHHcCC
Confidence 35567788776653321 12222222 799999999999999998763 34444445554444 566664
Q ss_pred C-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 122 D-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 122 ~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
. ..+++.|||.||..++.+|..||+ |+++||-++.
T Consensus 309 ~~edIilygWSIGGF~~~waAs~YPd---------VkavvLDAtF 344 (517)
T KOG1553|consen 309 RQEDIILYGWSIGGFPVAWAASNYPD---------VKAVVLDATF 344 (517)
T ss_pred CccceEEEEeecCCchHHHHhhcCCC---------ceEEEeecch
Confidence 2 279999999999999999999997 9999987665
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=98.41 E-value=2.8e-05 Score=56.32 Aligned_cols=80 Identities=26% Similarity=0.387 Sum_probs=60.7
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
||.+|||.+|..+.+... +.+. +..|.|-.+.|.+. ...+....++.+..++.+.+-+ ...
T Consensus 2 ilYlHGFnSSP~shka~l--~~q~------------~~~~~~~i~y~~p~----l~h~p~~a~~ele~~i~~~~~~-~p~ 62 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVL--LLQF------------IDEDVRDIEYSTPH----LPHDPQQALKELEKAVQELGDE-SPL 62 (191)
T ss_pred eEEEecCCCCcccHHHHH--HHHH------------HhccccceeeecCC----CCCCHHHHHHHHHHHHHHcCCC-Cce
Confidence 899999999888887643 1211 22233444444433 3568899999999999999977 799
Q ss_pred EEEeChhHHHHHHHHHHcc
Q 020518 127 VIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 127 lvGhS~Gg~~a~~~a~~~p 145 (325)
+||-|+||..|.+++.++.
T Consensus 63 ivGssLGGY~At~l~~~~G 81 (191)
T COG3150 63 IVGSSLGGYYATWLGFLCG 81 (191)
T ss_pred EEeecchHHHHHHHHHHhC
Confidence 9999999999999999874
No 162
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=98.41 E-value=2e-05 Score=68.93 Aligned_cols=228 Identities=14% Similarity=0.122 Sum_probs=130.6
Q ss_pred ccccceEEEEcccCC--CCCCCceEEEecCCCCCC---CChHH--H--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 25 RSLQTLAYEEVRSSS--DRPYTSTAFVLHGLLGSG---RNWRS--F--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~--~~~~~~~vv~~HG~~~~~---~~~~~--~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
+.|.+++-..+.+.. +...-|+++++=|.++-. ..|.. . ...|+. .||-|+.+|-||......
T Consensus 621 ~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~Las--------lGy~Vv~IDnRGS~hRGl 692 (867)
T KOG2281|consen 621 KTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLAS--------LGYVVVFIDNRGSAHRGL 692 (867)
T ss_pred CCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhh--------cceEEEEEcCCCccccch
Confidence 445555544554432 123458899999998733 22321 1 234454 899999999999765533
Q ss_pred CCC-----CCCCCCHHHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 96 IEG-----LDPPHDIANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 96 ~~~-----~~~~~~~~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.-+ .-....++|.++-+.-+.++.| .+ ++.+.|||.||.+++....++|+ -++..|.=+|...
T Consensus 693 kFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmd-rV~vhGWSYGGYLSlm~L~~~P~--------IfrvAIAGapVT~ 763 (867)
T KOG2281|consen 693 KFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMD-RVGVHGWSYGGYLSLMGLAQYPN--------IFRVAIAGAPVTD 763 (867)
T ss_pred hhHHHHhhccCeeeehhhHHHHHHHHHhcCcccch-heeEeccccccHHHHHHhhcCcc--------eeeEEeccCccee
Confidence 211 0034568899999999998874 57 89999999999999999999998 4444333222211
Q ss_pred CCCCCCchhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcc
Q 020518 168 KVKTENSEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSY 247 (325)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (325)
....... ..+..+.. ++ .+. ..+..........
T Consensus 764 W~~YDTg-----------------------YTERYMg~--P~-------------~nE--~gY~agSV~~~Ve------- 796 (867)
T KOG2281|consen 764 WRLYDTG-----------------------YTERYMGY--PD-------------NNE--HGYGAGSVAGHVE------- 796 (867)
T ss_pred eeeeccc-----------------------chhhhcCC--Cc-------------cch--hcccchhHHHHHh-------
Confidence 0000000 00000000 00 000 0000000111111
Q ss_pred cccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc-cChHHHHHHHHHHHhc
Q 020518 248 WPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV-DNPKGLLEIVAPRIAS 324 (325)
Q Consensus 248 ~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~-e~p~~~~~~i~~fl~~ 324 (325)
.+..-+ -..++|+|--|.-+--.....+...+-+.++ .-++.++|+--|.+-- |.-+-....|..||+.
T Consensus 797 --klpdep--nRLlLvHGliDENVHF~Hts~Lvs~lvkagK----pyeL~IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 797 --KLPDEP--NRLLLVHGLIDENVHFAHTSRLVSALVKAGK----PYELQIFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred --hCCCCC--ceEEEEecccccchhhhhHHHHHHHHHhCCC----ceEEEEccccccccCCCccchhHHHHHHHHHhh
Confidence 111111 2358999999987766555555555544444 3899999999998754 4456677788888864
No 163
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=98.32 E-value=7.4e-05 Score=57.67 Aligned_cols=82 Identities=15% Similarity=0.185 Sum_probs=54.2
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE-EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR-MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
+..|||+.||+.+...+..+.. . .++. ++++|+|..- ++. + + .+.+
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~~--~---------~~~D~l~~yDYr~l~-------------~d~---~----~--~~y~ 57 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLIL--P---------ENYDVLICYDYRDLD-------------FDF---D----L--SGYR 57 (213)
T ss_pred CeEEEEEecCCCChHHhhhccC--C---------CCccEEEEecCcccc-------------ccc---c----c--ccCc
Confidence 5689999999998877765431 1 3444 4567876221 110 1 1 1346
Q ss_pred CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 123 WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 123 ~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
.++|||+|||-++|..+.... .+++-|.|++.+.+.
T Consensus 58 -~i~lvAWSmGVw~A~~~l~~~----------~~~~aiAINGT~~Pi 93 (213)
T PF04301_consen 58 -EIYLVAWSMGVWAANRVLQGI----------PFKRAIAINGTPYPI 93 (213)
T ss_pred -eEEEEEEeHHHHHHHHHhccC----------CcceeEEEECCCCCc
Confidence 999999999999998876543 467777788776544
No 164
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=98.30 E-value=0.00077 Score=58.38 Aligned_cols=140 Identities=14% Similarity=0.030 Sum_probs=86.9
Q ss_pred ccccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccC----------CCCceEEEEeCCC-CCCCC
Q 020518 25 RSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS----------ASSEWRMVLVDLR-NHGRS 93 (325)
Q Consensus 25 ~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~vi~~D~~-G~G~S 93 (325)
..+..|+|.-+.+..+..++|.||.+.|.++.+..- .+..++....-+.+ =++--.++.+|.| |-|.|
T Consensus 54 ~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFS 132 (454)
T KOG1282|consen 54 SEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQPVGVGFS 132 (454)
T ss_pred CCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEcCCCCcceeCCccccccccEEEEecCCcCCcc
Confidence 357889999887765556789999999999977554 33333321111000 0233468889977 88888
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccC--CccCCcceEEEEec
Q 020518 94 AEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYG--QFVALPKQLWVLDS 164 (325)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~--~~~~~v~~lvli~~ 164 (325)
......+...+-+..|+|...+|.+. .-+ +++|.|-|.+|...-.+|.+--+.... .....++++++=++
T Consensus 133 Ys~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~-~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg 211 (454)
T KOG1282|consen 133 YSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSN-DFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNG 211 (454)
T ss_pred ccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCC-CeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCc
Confidence 75543212345556667766666533 334 899999999998888777664332211 11125677777665
Q ss_pred CC
Q 020518 165 VP 166 (325)
Q Consensus 165 ~~ 166 (325)
..
T Consensus 212 ~t 213 (454)
T KOG1282|consen 212 LT 213 (454)
T ss_pred cc
Confidence 53
No 165
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=98.28 E-value=7.2e-06 Score=71.79 Aligned_cols=127 Identities=18% Similarity=0.086 Sum_probs=90.9
Q ss_pred CccccccceEEEEcccCCCCCCCceEEEecCCCCCCC---Ch--HHHHH---HHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 22 PTTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGR---NW--RSFSR---NLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 22 ~~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~---~~--~~~~~---~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
..++||.+|+-..|.+... ...|+++..+-++-... .+ ....+ .++. .||.|+..|.||.|.|
T Consensus 24 V~MRDGvrL~~dIy~Pa~~-g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa--------~GYavV~qDvRG~~~S 94 (563)
T COG2936 24 VPMRDGVRLAADIYRPAGA-GPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAA--------QGYAVVNQDVRGRGGS 94 (563)
T ss_pred EEecCCeEEEEEEEccCCC-CCCceeEEeeccccccccccCcchhhcccccceeec--------CceEEEEecccccccC
Confidence 3568999999999987533 55788888883333222 11 11122 2344 8999999999999999
Q ss_pred CCCCCCCCCCC-HHHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 94 AEIEGLDPPHD-IANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 94 ~~~~~~~~~~~-~~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
..... ..++ -.+..-|+.+++.+.-. +++|..+|-|++|...+.+|+..|. .++.++...+...
T Consensus 95 eG~~~--~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pP--------aLkai~p~~~~~D 160 (563)
T COG2936 95 EGVFD--PESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPP--------ALKAIAPTEGLVD 160 (563)
T ss_pred Ccccc--eeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCc--------hheeecccccccc
Confidence 98764 3344 34445567777766533 3489999999999999999999887 7888888776644
No 166
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.28 E-value=8.1e-06 Score=66.81 Aligned_cols=117 Identities=12% Similarity=0.020 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG--LDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~--~~~~~~~~~~~~~l~~~l~~ 118 (325)
..+..+||+||+..+-.. -...+.-... . ......+.+.+|..|.--...- ....++-..+..-|..+.+.
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d-~-----g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~ 187 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHD-S-----GNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATD 187 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhh-c-----CCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhC
Confidence 467889999999875432 1222222222 1 0455778888987775332211 00233344444444444444
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
...+ +++|++||||.+++++...+---+.......+++-+||-+|-
T Consensus 188 ~~~~-~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPD 233 (377)
T COG4782 188 KPVK-RIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPD 233 (377)
T ss_pred CCCc-eEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCC
Confidence 4566 899999999999999887553211111011266777776643
No 167
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.24 E-value=3.9e-05 Score=66.74 Aligned_cols=163 Identities=16% Similarity=0.114 Sum_probs=100.8
Q ss_pred CCceEEEecCCCC--CCCChHH-HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-
Q 020518 43 YTSTAFVLHGLLG--SGRNWRS-FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA- 118 (325)
Q Consensus 43 ~~~~vv~~HG~~~--~~~~~~~-~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~- 118 (325)
..|.++++||.+. ....|.. +...|.-.. +-..+-++|++.-- ....+..-++.+..+...
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~g------evvev~tfdl~n~i---------gG~nI~h~ae~~vSf~r~k 239 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKG------EVVEVPTFDLNNPI---------GGANIKHAAEYSVSFDRYK 239 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhc------eeeeeccccccCCC---------CCcchHHHHHHHHHHhhhh
Confidence 4678899999982 2223322 223333211 33456677765211 124555666666665552
Q ss_pred -------hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhcCCCC
Q 020518 119 -------KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQSLPSS 191 (325)
Q Consensus 119 -------~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (325)
+... +++|+|.|||+.++.+......+ .-|.++|.++-+........
T Consensus 240 vlei~gefpha-~IiLvGrsmGAlVachVSpsnsd-------v~V~~vVCigypl~~vdgpr------------------ 293 (784)
T KOG3253|consen 240 VLEITGEFPHA-PIILVGRSMGALVACHVSPSNSD-------VEVDAVVCIGYPLDTVDGPR------------------ 293 (784)
T ss_pred hhhhhccCCCC-ceEEEecccCceeeEEeccccCC-------ceEEEEEEecccccCCCccc------------------
Confidence 2234 89999999999988888876654 24788887774432211000
Q ss_pred CCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCCCCCC
Q 020518 192 IPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEKSDRW 271 (325)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~ 271 (325)
. ...+.+..+ +.|+|+|.|..|..+
T Consensus 294 -------------------------------------------------g----irDE~Lldm--k~PVLFV~Gsnd~mc 318 (784)
T KOG3253|consen 294 -------------------------------------------------G----IRDEALLDM--KQPVLFVIGSNDHMC 318 (784)
T ss_pred -------------------------------------------------C----CcchhhHhc--CCceEEEecCCcccC
Confidence 0 000111222 279999999999999
Q ss_pred ChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccc
Q 020518 272 DPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHV 308 (325)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~ 308 (325)
++...+.+++.... ..+++++.+++|.+-.
T Consensus 319 spn~ME~vreKMqA-------~~elhVI~~adhsmai 348 (784)
T KOG3253|consen 319 SPNSMEEVREKMQA-------EVELHVIGGADHSMAI 348 (784)
T ss_pred CHHHHHHHHHHhhc-------cceEEEecCCCccccC
Confidence 99888888776654 2889999999998765
No 168
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.24 E-value=6.5e-06 Score=66.75 Aligned_cols=53 Identities=25% Similarity=0.227 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHHhC-CCC-CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 106 ANAANDLANLVKAKG-WDW-PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-~~~-~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+-+.++|..+|++.- ... +..|+|+||||..|+.++.++|+ .+.+++.+++..
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd--------~F~~~~~~S~~~ 150 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPD--------LFGAVIAFSGAL 150 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTT--------TESEEEEESEES
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCcc--------ccccccccCccc
Confidence 345567777777652 221 37999999999999999999999 999999999764
No 169
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.18 E-value=2.6e-05 Score=58.76 Aligned_cols=127 Identities=17% Similarity=0.136 Sum_probs=78.1
Q ss_pred cccceEEEEcccCCCCC--CCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCceEEEEeCC--CCCCCCCCCCC-
Q 020518 26 SLQTLAYEEVRSSSDRP--YTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSEWRMVLVDL--RNHGRSAEIEG- 98 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~--~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~~~vi~~D~--~G~G~S~~~~~- 98 (325)
-.+.+.+-.+-++.... .-|+|.++-|+.++.+.|.. .....+.. .|+.|+++|- ||.--...+..
T Consensus 24 l~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~-------hgl~vV~PDTSPRG~~v~g~~esw 96 (283)
T KOG3101|consen 24 LKCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASK-------HGLAVVAPDTSPRGVEVAGDDESW 96 (283)
T ss_pred cccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhh-------cCeEEECCCCCCCccccCCCcccc
Confidence 35667777666543222 24889999999999988753 22222221 6889999984 44321111100
Q ss_pred -CC---------------CCCCHH-HHHHHHHHHHHH----hCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 99 -LD---------------PPHDIA-NAANDLANLVKA----KGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 99 -~~---------------~~~~~~-~~~~~l~~~l~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
+. ..|.+- -+++.+-+++.. ++.. ++.+.||||||.=|+..+++.|. +.+
T Consensus 97 DFG~GAGFYvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~-k~~IfGHSMGGhGAl~~~Lkn~~--------kyk 167 (283)
T KOG3101|consen 97 DFGQGAGFYVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPL-KVGIFGHSMGGHGALTIYLKNPS--------KYK 167 (283)
T ss_pred cccCCceeEEecccchHhhhhhHHHHHHHHHHHHhccccccccch-hcceeccccCCCceEEEEEcCcc--------ccc
Confidence 00 112222 234455555542 2345 78999999999999999999998 888
Q ss_pred eEEEEecCCCC
Q 020518 158 QLWVLDSVPGK 168 (325)
Q Consensus 158 ~lvli~~~~~~ 168 (325)
++-..+|...+
T Consensus 168 SvSAFAPI~NP 178 (283)
T KOG3101|consen 168 SVSAFAPICNP 178 (283)
T ss_pred ceeccccccCc
Confidence 87776665433
No 170
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.16 E-value=6.8e-05 Score=62.79 Aligned_cols=115 Identities=20% Similarity=0.200 Sum_probs=79.7
Q ss_pred CCceEEEecCCCCCCCChHHHHHHH---HhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNL---ASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l---~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
+.|.||++||.|-.-......+..| ...+ ....++++|+.-...-.... ..+..+.+.++-...+++..
T Consensus 121 ~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l------~~~SILvLDYsLt~~~~~~~--~yPtQL~qlv~~Y~~Lv~~~ 192 (374)
T PF10340_consen 121 SDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL------PEVSILVLDYSLTSSDEHGH--KYPTQLRQLVATYDYLVESE 192 (374)
T ss_pred CCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc------CCCeEEEEeccccccccCCC--cCchHHHHHHHHHHHHHhcc
Confidence 4699999999987665554443333 3333 45588888886543111111 15677888999999999888
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKV 169 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~ 169 (325)
|.+ +++|+|-|.||.+++.+.+...+.. .....+++|+++|+....
T Consensus 193 G~~-nI~LmGDSAGGnL~Ls~LqyL~~~~---~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 193 GNK-NIILMGDSAGGNLALSFLQYLKKPN---KLPYPKSAILISPWVNLV 238 (374)
T ss_pred CCC-eEEEEecCccHHHHHHHHHHHhhcC---CCCCCceeEEECCCcCCc
Confidence 888 9999999999999998876532200 112578999999986554
No 171
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.13 E-value=0.00015 Score=56.74 Aligned_cols=56 Identities=14% Similarity=0.153 Sum_probs=46.3
Q ss_pred EEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccc-cccChHHHHHHHHHHHhc
Q 020518 260 IAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWV-HVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 260 ~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~-~~e~p~~~~~~i~~fl~~ 324 (325)
+.++.+.+|.+++......+++..++ +++..+++ ||.. .+-+-+.+-..|.+-|++
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg--------~eVr~~eg-GHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG--------CEVRYLEG-GHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC--------CEEEEeec-CceeeeehhchHHHHHHHHHHHh
Confidence 57788999999998888888888887 99999995 9974 446778999999888865
No 172
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.10 E-value=0.002 Score=54.35 Aligned_cols=159 Identities=15% Similarity=0.130 Sum_probs=96.6
Q ss_pred HHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHhhc
Q 020518 111 DLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTLQS 187 (325)
Q Consensus 111 ~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (325)
.+.+++++. .++ +++|.|.|==|..++..|+- .. ||++++-+.-... .....+....+.+.
T Consensus 158 ~vq~~~~~~~~~~i~-~FvV~GaSKRGWTtWltaa~-D~--------RV~aivP~Vid~L-----N~~~~l~h~y~~yG- 221 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIE-KFVVTGASKRGWTTWLTAAV-DP--------RVKAIVPIVIDVL-----NMKANLEHQYRSYG- 221 (367)
T ss_pred HHHHHHHhhcCCCcc-EEEEeCCchHhHHHHHhhcc-Cc--------ceeEEeeEEEccC-----CcHHHHHHHHHHhC-
Confidence 345555555 677 99999999999999999994 44 8999886664321 11222222222222
Q ss_pred CCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccCCCCCCcEEEEeeCC
Q 020518 188 LPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEHPPQGMEIAIVRAEK 267 (325)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~ 267 (325)
..+...+.++....+.... +-..+..+........+. +++. +|.++|.|..
T Consensus 222 -----------------~~ws~a~~dY~~~gi~~~l-------~tp~f~~L~~ivDP~~Y~---~rL~--~PK~ii~atg 272 (367)
T PF10142_consen 222 -----------------GNWSFAFQDYYNEGITQQL-------DTPEFDKLMQIVDPYSYR---DRLT--MPKYIINATG 272 (367)
T ss_pred -----------------CCCccchhhhhHhCchhhc-------CCHHHHHHHHhcCHHHHH---HhcC--ccEEEEecCC
Confidence 1223333333333322111 122233333332222222 3333 7999999999
Q ss_pred CCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 268 SDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 268 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
|+++.|+........+++ ...+..+|+++|..-. ..+.+.|..|+.+
T Consensus 273 DeFf~pD~~~~y~d~L~G-------~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 273 DEFFVPDSSNFYYDKLPG-------EKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred CceeccCchHHHHhhCCC-------CeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 999999887666665554 2789999999998876 6677778888764
No 173
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=98.04 E-value=0.0012 Score=55.64 Aligned_cols=47 Identities=11% Similarity=0.098 Sum_probs=34.3
Q ss_pred ccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEe
Q 020518 249 PLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVL 299 (325)
Q Consensus 249 ~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (325)
........++-.+..|+..|+..|.+.-+.+.+.+..++=. +++..+
T Consensus 285 ~iqs~~n~~~~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfd----a~l~lI 331 (403)
T PF11144_consen 285 KIQSNYNKKIIYVSYHSIKDDLAPAEDKEELYEILKNLGFD----ATLHLI 331 (403)
T ss_pred HHHHhcccceEEEEEeccCCCCCCHHHHHHHHHHHHHcCCC----eEEEEe
Confidence 33333433345577899999999999888888888877653 788777
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.03 E-value=4.2e-05 Score=67.23 Aligned_cols=107 Identities=23% Similarity=0.299 Sum_probs=69.4
Q ss_pred CceEEEecCCCCCCCC-h--HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----CCCCHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN-W--RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD----PPHDIANAANDLANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~-~--~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~l~~~l 116 (325)
+|.+|++-| -+.... | ..++..|++.+ |--++++.+|-+|.|.+..... ...+.++..+|+..++
T Consensus 29 gpifl~~gg-E~~~~~~~~~~~~~~~lA~~~-------~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~ 100 (434)
T PF05577_consen 29 GPIFLYIGG-EGPIEPFWINNGFMWELAKEF-------GALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFI 100 (434)
T ss_dssp SEEEEEE---SS-HHHHHHH-HHHHHHHHHH-------TEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHH
T ss_pred CCEEEEECC-CCccchhhhcCChHHHHHHHc-------CCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHH
Confidence 565555544 343322 2 23566677664 5589999999999998654211 4568999999999998
Q ss_pred HHhC------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKG------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+. .+.|++++|-|.||++|..+-.+||+ .|.+.+.-+++.
T Consensus 101 ~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~--------~~~ga~ASSapv 148 (434)
T PF05577_consen 101 RYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH--------LFDGAWASSAPV 148 (434)
T ss_dssp HHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT--------T-SEEEEET--C
T ss_pred HHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC--------eeEEEEecccee
Confidence 7653 23489999999999999999999999 888887766553
No 175
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.96 E-value=6.9e-05 Score=64.53 Aligned_cols=85 Identities=22% Similarity=0.240 Sum_probs=57.8
Q ss_pred ChHHHHHHHHhhhhccCCCCceE------EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---CCCCCEEEEE
Q 020518 59 NWRSFSRNLASTLSQTSASSEWR------MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK---GWDWPDVVIG 129 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~lvG 129 (325)
.|..+++.|.+ .||. ..-+|+|-- ....+++...+..++++. . .++++|||
T Consensus 66 ~~~~li~~L~~--------~GY~~~~~l~~~pYDWR~~-----------~~~~~~~~~~lk~~ie~~~~~~-~~kv~li~ 125 (389)
T PF02450_consen 66 YFAKLIENLEK--------LGYDRGKDLFAAPYDWRLS-----------PAERDEYFTKLKQLIEEAYKKN-GKKVVLIA 125 (389)
T ss_pred hHHHHHHHHHh--------cCcccCCEEEEEeechhhc-----------hhhHHHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 78899999986 5554 222677611 113446666666666543 3 34999999
Q ss_pred eChhHHHHHHHHHHccccc-cCCccCCcceEEEEecCC
Q 020518 130 HSMGGKVALHFAQSCARAD-YGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 130 hS~Gg~~a~~~a~~~p~~~-~~~~~~~v~~lvli~~~~ 166 (325)
|||||.++..+....+... . ...|+++|.++++.
T Consensus 126 HSmGgl~~~~fl~~~~~~~W~---~~~i~~~i~i~~p~ 160 (389)
T PF02450_consen 126 HSMGGLVARYFLQWMPQEEWK---DKYIKRFISIGTPF 160 (389)
T ss_pred eCCCchHHHHHHHhccchhhH---HhhhhEEEEeCCCC
Confidence 9999999999998886510 0 02699999999764
No 176
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.86 E-value=0.0001 Score=66.01 Aligned_cols=109 Identities=17% Similarity=0.106 Sum_probs=65.7
Q ss_pred CCCceEEEecCCCCC---CCChHHHHHHHHhhhhccCCCC-ceEEEEeCCC----CCCCCCCCCCCCCCCCHHHH---HH
Q 020518 42 PYTSTAFVLHGLLGS---GRNWRSFSRNLASTLSQTSASS-EWRMVLVDLR----NHGRSAEIEGLDPPHDIANA---AN 110 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~---~~~~~~~~~~l~~~~~~~~~~~-~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~~ 110 (325)
+..|.||++||.+.. ...+ ....|... . ++-|+.+++| |+..+.... ......+.|. .+
T Consensus 93 ~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~-------~~~~~vv~~~yRlg~~g~~~~~~~~-~~~n~g~~D~~~al~ 162 (493)
T cd00312 93 NSLPVMVWIHGGGFMFGSGSLY--PGDGLARE-------GDNVIVVSINYRLGVLGFLSTGDIE-LPGNYGLKDQRLALK 162 (493)
T ss_pred CCCCEEEEEcCCccccCCCCCC--ChHHHHhc-------CCCEEEEEecccccccccccCCCCC-CCcchhHHHHHHHHH
Confidence 457899999996432 2222 22344432 3 3899999999 333332211 0022334443 34
Q ss_pred HHHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 111 DLANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 111 ~l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.+.+-++..+ .+ +|+|+|+|.||..+..++..... ...++++|+.++...
T Consensus 163 wv~~~i~~fggd~~-~v~~~G~SaG~~~~~~~~~~~~~------~~lf~~~i~~sg~~~ 214 (493)
T cd00312 163 WVQDNIAAFGGDPD-SVTIFGESAGGASVSLLLLSPDS------KGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHhCCCcc-eEEEEeecHHHHHhhhHhhCcch------hHHHHHHhhhcCCcc
Confidence 4555556654 45 89999999999999888775211 117889998887643
No 177
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=97.84 E-value=0.00038 Score=57.71 Aligned_cols=71 Identities=18% Similarity=0.188 Sum_probs=51.8
Q ss_pred ccccccCCCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH---HHHHHHHHHHh
Q 020518 247 YWPLLEHPPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK---GLLEIVAPRIA 323 (325)
Q Consensus 247 ~~~~~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~---~~~~~i~~fl~ 323 (325)
....+..+.. +|+++++|.+|..++......+.......+ .+...+++++|......+. +..+.+.+|+.
T Consensus 223 ~~~~~~~i~~-~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~------~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~ 295 (299)
T COG1073 223 PFDDAEKISP-RPVLLVHGERDEVVPLRDAEDLYEAARERP------KKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLE 295 (299)
T ss_pred chhhHhhcCC-cceEEEecCCCcccchhhhHHHHhhhccCC------ceEEEecCCccccccCccHHHHHHHHHHHHHHH
Confidence 3334444433 699999999999999988877776665421 6888888999998865444 67778888876
Q ss_pred c
Q 020518 324 S 324 (325)
Q Consensus 324 ~ 324 (325)
+
T Consensus 296 ~ 296 (299)
T COG1073 296 R 296 (299)
T ss_pred H
Confidence 4
No 178
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.82 E-value=0.00015 Score=65.23 Aligned_cols=113 Identities=19% Similarity=0.211 Sum_probs=64.5
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccC--------CCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS--------ASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLA 113 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~--------~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~ 113 (325)
.++-||+|++|..|+...-+.++..-...+.+.. .-..|+.+++|+-+- .|.- ...++.+.++-+.
T Consensus 87 lsGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe-~tAm-----~G~~l~dQtEYV~ 160 (973)
T KOG3724|consen 87 LSGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE-FTAM-----HGHILLDQTEYVN 160 (973)
T ss_pred CCCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch-hhhh-----ccHhHHHHHHHHH
Confidence 4678999999999988776666554442111000 012356677776421 0111 2345666666555
Q ss_pred HHHHHh-----C-------CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 114 NLVKAK-----G-------WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 114 ~~l~~~-----~-------~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.++.. + ..+.+++|||||||++|...+. +|....+ .|.-++.++++
T Consensus 161 dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~t-lkn~~~~----sVntIITlssP 219 (973)
T KOG3724|consen 161 DAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLT-LKNEVQG----SVNTIITLSSP 219 (973)
T ss_pred HHHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHh-hhhhccc----hhhhhhhhcCc
Confidence 554422 2 1125999999999999887664 3431111 56666666654
No 179
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.72 E-value=0.00016 Score=49.46 Aligned_cols=58 Identities=10% Similarity=0.025 Sum_probs=51.1
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
.|+|+|.++.|...+.+..+.+.+.+.+ ++++.+++.||......-.-+.+.+.+||.
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~--------s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~ 92 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG--------SRLVTVDGAGHGVYAGGSPCVDKAVDDYLL 92 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC--------ceEEEEeccCcceecCCChHHHHHHHHHHH
Confidence 7999999999999999999988888876 899999999999987555677888888885
No 180
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=97.67 E-value=0.00068 Score=59.42 Aligned_cols=234 Identities=13% Similarity=0.070 Sum_probs=124.7
Q ss_pred ccccccceEEEEcccCCCCCCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCC--
Q 020518 23 TTRSLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEG-- 98 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~-- 98 (325)
+..||.+|.|...+..-..++.|++|+-=|...-+ -.|........+ +|...+.-++||=|.-.+.-+
T Consensus 400 tSkDGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~~~WLe--------rGg~~v~ANIRGGGEfGp~WH~A 471 (648)
T COG1505 400 TSKDGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSRKLWLE--------RGGVFVLANIRGGGEFGPEWHQA 471 (648)
T ss_pred EcCCCccccEEEEecCCcCCCCceEEEeccccccccCCccchhhHHHHh--------cCCeEEEEecccCCccCHHHHHH
Confidence 34689999999987221222567776555443322 234444444444 788888889999765432110
Q ss_pred ---CCCCCCHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCC
Q 020518 99 ---LDPPHDIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTEN 173 (325)
Q Consensus 99 ---~~~~~~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~ 173 (325)
......+++++.-...++++- .++ ++-+-|-|-||.+.-....++|| .+.++|+--|...+..
T Consensus 472 a~k~nrq~vfdDf~AVaedLi~rgitspe-~lgi~GgSNGGLLvg~alTQrPe--------lfgA~v~evPllDMlR--- 539 (648)
T COG1505 472 GMKENKQNVFDDFIAVAEDLIKRGITSPE-KLGIQGGSNGGLLVGAALTQRPE--------LFGAAVCEVPLLDMLR--- 539 (648)
T ss_pred HhhhcchhhhHHHHHHHHHHHHhCCCCHH-HhhhccCCCCceEEEeeeccChh--------hhCceeeccchhhhhh---
Confidence 002223444444444444332 123 68899999999999999999999 7777665444432211
Q ss_pred chhHHHHHHHHhhcCCCCCCcHHHHHHHHHhhccchhHHHHHhhcccCCCcccccccChhHHHHhhhcccCCcccccccC
Q 020518 174 SEGEVEKVLQTLQSLPSSIPSRKWLVNHMMELGFSKSLSEWIGTNLKKSGERETWAFNLDGAVQMFNSYREMSYWPLLEH 253 (325)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (325)
.-. .. .-..|+.+.-.... +... ..+..|... ..+..
T Consensus 540 ----------Yh~----l~-----------------aG~sW~~EYG~Pd~--------P~d~-~~l~~YSPy---~nl~~ 576 (648)
T COG1505 540 ----------YHL----LT-----------------AGSSWIAEYGNPDD--------PEDR-AFLLAYSPY---HNLKP 576 (648)
T ss_pred ----------hcc----cc-----------------cchhhHhhcCCCCC--------HHHH-HHHHhcCch---hcCCc
Confidence 000 00 00112221111110 1111 122222222 12222
Q ss_pred CCCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChH--HHHHHHHHHHh
Q 020518 254 PPQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPK--GLLEIVAPRIA 323 (325)
Q Consensus 254 ~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~--~~~~~i~~fl~ 323 (325)
-.+--|+|+-.+..|+.|-|..+..+...+...+.. +=+.+=-++||..--...+ .-...+..||.
T Consensus 577 g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~~~p----v~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~ 644 (648)
T COG1505 577 GQKYPPTLITTSLHDDRVHPAHARKFAAKLQEVGAP----VLLREETKGGHGGAAPTAEIARELADLLAFLL 644 (648)
T ss_pred cccCCCeEEEcccccccccchHHHHHHHHHHhcCCc----eEEEeecCCcccCCCChHHHHHHHHHHHHHHH
Confidence 111137899999999999999888888888776531 3333334579987654333 22334445554
No 181
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.65 E-value=0.0004 Score=57.88 Aligned_cols=87 Identities=21% Similarity=0.108 Sum_probs=59.9
Q ss_pred CCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
+...-||+-|=|+-...=+.+...|.+ .|+.|+.+|-.-|--| .-+.++.++|+..+++..
T Consensus 259 sd~~av~~SGDGGWr~lDk~v~~~l~~--------~gvpVvGvdsLRYfW~--------~rtPe~~a~Dl~r~i~~y~~~ 322 (456)
T COG3946 259 SDTVAVFYSGDGGWRDLDKEVAEALQK--------QGVPVVGVDSLRYFWS--------ERTPEQIAADLSRLIRFYARR 322 (456)
T ss_pred cceEEEEEecCCchhhhhHHHHHHHHH--------CCCceeeeehhhhhhc--------cCCHHHHHHHHHHHHHHHHHh
Confidence 344556776665533333445666666 8999999995434333 335678888888888754
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.. ++.|+|+|+|+-+.-..-.+.|.
T Consensus 323 w~~~-~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 323 WGAK-RVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred hCcc-eEEEEeecccchhhHHHHHhCCH
Confidence 556 89999999999987766666554
No 182
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=97.64 E-value=0.0017 Score=61.47 Aligned_cols=101 Identities=20% Similarity=0.232 Sum_probs=75.5
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
...|+++|+|-.-+....+++++..|. .|-||.-....- +..++++.+.-...-++++.+
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rle------------------~PaYglQ~T~~v--P~dSies~A~~yirqirkvQP 2180 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRLE------------------IPAYGLQCTEAV--PLDSIESLAAYYIRQIRKVQP 2180 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhcC------------------CcchhhhccccC--CcchHHHHHHHHHHHHHhcCC
Confidence 457899999998877666655544332 355554333222 567899999999999999998
Q ss_pred CCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 122 DWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
.+|+.++|+|+|+.++..+|....++. ....+|++++.+..
T Consensus 2181 ~GPYrl~GYSyG~~l~f~ma~~Lqe~~------~~~~lillDGspty 2221 (2376)
T KOG1202|consen 2181 EGPYRLAGYSYGACLAFEMASQLQEQQ------SPAPLILLDGSPTY 2221 (2376)
T ss_pred CCCeeeeccchhHHHHHHHHHHHHhhc------CCCcEEEecCchHH
Confidence 889999999999999999997655421 45669999987643
No 183
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.62 E-value=0.0019 Score=48.59 Aligned_cols=55 Identities=24% Similarity=0.126 Sum_probs=43.3
Q ss_pred CHHHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
--++-+.+|..|++.+. .+..+.++|||+|+.++-..+...+. .+..+|+++++.
T Consensus 86 ~A~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~--------~vddvv~~GSPG 144 (177)
T PF06259_consen 86 YARAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGL--------RVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCC--------CcccEEEECCCC
Confidence 35666777888887663 23379999999999999999887555 899999998764
No 184
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.47 E-value=0.00088 Score=57.66 Aligned_cols=120 Identities=17% Similarity=0.070 Sum_probs=69.5
Q ss_pred EcccCCCCCCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCc-eEEEEeCCC-C-CCC---CCCCC--CCCCC
Q 020518 34 EVRSSSDRPYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSE-WRMVLVDLR-N-HGR---SAEIE--GLDPP 102 (325)
Q Consensus 34 ~~~~~~~~~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~-~~vi~~D~~-G-~G~---S~~~~--~~~~~ 102 (325)
.+.+..+..+.|++|+|||.+- +......--..|++ +| +-|+++++| | +|. |.... .....
T Consensus 84 IwaP~~~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~--------~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n 155 (491)
T COG2272 84 IWAPEVPAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAA--------RGDVVVVSVNYRLGALGFLDLSSLDTEDAFASN 155 (491)
T ss_pred eeccCCCCCCCcEEEEEeccccccCCCcccccChHHHHh--------cCCEEEEEeCcccccceeeehhhcccccccccc
Confidence 3333323345699999999743 33321111234665 55 888888887 1 121 11110 00012
Q ss_pred CCHHHH---HHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 103 HDIANA---ANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 103 ~~~~~~---~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
.-+.|+ .+.+.+-|++.|-+ .+|.|+|+|.||+.++.+.+. |+ .. ..+.++|+.++...
T Consensus 156 ~Gl~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~-Ak----GLF~rAi~~Sg~~~ 218 (491)
T COG2272 156 LGLLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PS-AK----GLFHRAIALSGAAS 218 (491)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-cc-ch----HHHHHHHHhCCCCC
Confidence 233443 45667778888643 279999999999988877764 54 11 16777788887654
No 185
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.46 E-value=0.0068 Score=46.10 Aligned_cols=114 Identities=13% Similarity=0.149 Sum_probs=69.8
Q ss_pred CCCceEEEecCCCCC-CCChHH------------HHHHHHhhhhccCCCCceEEEEeCCCC---CCCCCCCCCCCCCCCH
Q 020518 42 PYTSTAFVLHGLLGS-GRNWRS------------FSRNLASTLSQTSASSEWRMVLVDLRN---HGRSAEIEGLDPPHDI 105 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~-~~~~~~------------~~~~l~~~~~~~~~~~~~~vi~~D~~G---~G~S~~~~~~~~~~~~ 105 (325)
.....+|+|||-|-- +..|.+ +++.+.+... .||.|+..+.-- +-.+...+.. ...+.
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~-----~Gygviv~N~N~~~kfye~k~np~k-yirt~ 172 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVA-----EGYGVIVLNPNRERKFYEKKRNPQK-YIRTP 172 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHH-----cCCcEEEeCCchhhhhhhcccCcch-hccch
Confidence 446689999998763 344531 1222222221 799999887531 2222221110 12233
Q ss_pred HHHHHH-HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 106 ANAAND-LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 106 ~~~~~~-l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
.+.+.- ...++...... .+.++.||.||...+.+..++|+. ++|.++.+-+++...
T Consensus 173 veh~~yvw~~~v~pa~~~-sv~vvahsyGG~~t~~l~~~f~~d------~~v~aialTDs~~~~ 229 (297)
T KOG3967|consen 173 VEHAKYVWKNIVLPAKAE-SVFVVAHSYGGSLTLDLVERFPDD------ESVFAIALTDSAMGS 229 (297)
T ss_pred HHHHHHHHHHHhcccCcc-eEEEEEeccCChhHHHHHHhcCCc------cceEEEEeecccccC
Confidence 344433 34455555667 899999999999999999999972 478888888877433
No 186
>COG0627 Predicted esterase [General function prediction only]
Probab=97.39 E-value=0.00087 Score=55.55 Aligned_cols=112 Identities=25% Similarity=0.224 Sum_probs=68.9
Q ss_pred CCCceEEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCC--C------------CCCCCCCCCCCC-----
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDL--R------------NHGRSAEIEGLD----- 100 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~--~------------G~G~S~~~~~~~----- 100 (325)
.+-|+++++||..++...|..+ ++..... .++.++++|- | |-+.|-......
T Consensus 52 ~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~-------~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~ 124 (316)
T COG0627 52 RDIPVLYLLSGLTCNEPNVYLLDGLRRQADE-------SGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWAS 124 (316)
T ss_pred CCCCEEEEeCCCCCCCCceEeccchhhhhhh-------cCeEEecCCCCcccCCCCccccccCCCccceecccccCcccc
Confidence 3457888999998886444321 2222322 6777777632 2 333332111100
Q ss_pred CCCCHHHH-HHHHHHHHHHhCC-CC---CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 101 PPHDIANA-ANDLANLVKAKGW-DW---PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 101 ~~~~~~~~-~~~l~~~l~~~~~-~~---~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
..+.++++ .+++-+.+++... .. ...++||||||.=|+.+|+++|+ +++.+..+++....
T Consensus 125 ~~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd--------~f~~~sS~Sg~~~~ 189 (316)
T COG0627 125 GPYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPD--------RFKSASSFSGILSP 189 (316)
T ss_pred CccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcc--------hhceeccccccccc
Confidence 12555554 4456545554432 21 57899999999999999999999 99998888876443
No 187
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.39 E-value=0.00069 Score=50.29 Aligned_cols=56 Identities=20% Similarity=0.126 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 106 ANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 106 ~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
..+...+...+++. ... +++++|||+||.+|..++........ ..+..++.++++.
T Consensus 8 ~~~~~~i~~~~~~~~~~~p~~-~i~v~GHSlGg~lA~l~a~~~~~~~~----~~~~~~~~fg~p~ 67 (153)
T cd00741 8 RSLANLVLPLLKSALAQYPDY-KIHVTGHSLGGALAGLAGLDLRGRGL----GRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHHCCCC-eEEEEEcCHHHHHHHHHHHHHHhccC----CCceEEEEeCCCc
Confidence 34445555555443 445 89999999999999999988765110 1456677777653
No 188
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.28 E-value=0.00071 Score=49.33 Aligned_cols=40 Identities=30% Similarity=0.297 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+...+.+..++++.... ++++.|||+||.+|..++....+
T Consensus 48 ~~~~~~l~~~~~~~~~~-~i~itGHSLGGalA~l~a~~l~~ 87 (140)
T PF01764_consen 48 DQILDALKELVEKYPDY-SIVITGHSLGGALASLAAADLAS 87 (140)
T ss_dssp HHHHHHHHHHHHHSTTS-EEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcccCc-cchhhccchHHHHHHHHHHhhhh
Confidence 34556666766666645 89999999999999999987644
No 189
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=97.25 E-value=0.0017 Score=54.39 Aligned_cols=96 Identities=23% Similarity=0.242 Sum_probs=68.4
Q ss_pred CceEEEecCCCCCCCChHH---HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCC-------CCCCCHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRS---FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGL-------DPPHDIANAANDLA 113 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~-------~~~~~~~~~~~~l~ 113 (325)
+.||+|.-|--++.+.|.. ++-.++..+ +--+|...+|-+|.|.+-... -...+.++-..|..
T Consensus 80 ~gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~-------~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA 152 (492)
T KOG2183|consen 80 EGPIFFYTGNEGDIEWFANNTGFMWDLAPEL-------KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFA 152 (492)
T ss_pred CCceEEEeCCcccHHHHHhccchHHhhhHhh-------CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHH
Confidence 3689999999887765542 344444432 337889999999999764321 02335666667777
Q ss_pred HHHHHhCC-----CCCEEEEEeChhHHHHHHHHHHccc
Q 020518 114 NLVKAKGW-----DWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 114 ~~l~~~~~-----~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.++..+.- ..+++++|-|.||++|..+=.+||.
T Consensus 153 ~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 153 ELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred HHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 77766532 2389999999999999999999999
No 190
>PLN02209 serine carboxypeptidase
Probab=97.16 E-value=0.0033 Score=54.88 Aligned_cols=137 Identities=12% Similarity=0.086 Sum_probs=82.2
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh---------------hccCCCCceEEEEeC-CCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL---------------SQTSASSEWRMVLVD-LRNH 90 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~vi~~D-~~G~ 90 (325)
+..+.|.-+.+.....+.|.|+++.|.++++..+..+.+ +.... ...+-++-.+++.+| ..|.
T Consensus 51 ~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~g~f~e-~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 129 (437)
T PLN02209 51 NVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLSGLFFE-NGPLALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGS 129 (437)
T ss_pred CeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhhhHHHh-cCCceeccCCCCCCcccceeCCCchhhcCcEEEecCCCCC
Confidence 456777766655445568999999999998866533221 11000 000123456899999 6699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--CCccCCcceEEE
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--GQFVALPKQLWV 161 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~~~~~~v~~lvl 161 (325)
|.|...... ...+-++.++++..++... ... +++|.|.|.||..+-.+|..--+... ......++++++
T Consensus 130 GfSy~~~~~-~~~~~~~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~i 207 (437)
T PLN02209 130 GFSYSKTPI-ERTSDTSEVKKIHEFLQKWLIKHPQFLSN-PFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVL 207 (437)
T ss_pred CccCCCCCC-CccCCHHHHHHHHHHHHHHHHhCccccCC-CEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEe
Confidence 998654321 1223334557766666543 224 89999999999987777755322110 011125678888
Q ss_pred EecCC
Q 020518 162 LDSVP 166 (325)
Q Consensus 162 i~~~~ 166 (325)
.++..
T Consensus 208 gng~t 212 (437)
T PLN02209 208 GNPIT 212 (437)
T ss_pred cCccc
Confidence 87753
No 191
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=97.14 E-value=0.077 Score=42.74 Aligned_cols=255 Identities=13% Similarity=0.150 Sum_probs=132.5
Q ss_pred CceEEEecCCCCCCCC-hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRN-WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
.|.|+++--+.++... .+..++.|. ....|+..|+-.-..-.... ..++++++.+-+.+++..+|.+
T Consensus 103 dPkvLivapmsGH~aTLLR~TV~alL---------p~~~vyitDW~dAr~Vp~~~---G~FdldDYIdyvie~~~~~Gp~ 170 (415)
T COG4553 103 DPKVLIVAPMSGHYATLLRGTVEALL---------PYHDVYITDWVDARMVPLEA---GHFDLDDYIDYVIEMINFLGPD 170 (415)
T ss_pred CCeEEEEecccccHHHHHHHHHHHhc---------cccceeEeeccccceeeccc---CCccHHHHHHHHHHHHHHhCCC
Confidence 5577777777664433 344566665 56688888886544333322 5789999999999999999965
Q ss_pred CCEEEEEeChh-----HHHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHH--HHHHHHhhc-----CCC
Q 020518 123 WPDVVIGHSMG-----GKVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEV--EKVLQTLQS-----LPS 190 (325)
Q Consensus 123 ~~~~lvGhS~G-----g~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~--~~~~~~~~~-----~~~ 190 (325)
.++++-+-= +.++++.+...|. ....+++++++............+ .+-+.++.. .+.
T Consensus 171 --~hv~aVCQP~vPvLAAisLM~~~~~p~--------~PssMtlmGgPIDaR~nPTavN~lA~~k~~~WF~~n~vm~vP~ 240 (415)
T COG4553 171 --AHVMAVCQPTVPVLAAISLMEEDGDPN--------VPSSMTLMGGPIDARKNPTAVNELATEKSIEWFRDNVVMQVPP 240 (415)
T ss_pred --CcEEEEecCCchHHHHHHHHHhcCCCC--------CCceeeeecCccccccCcHHHhHhhhccchHHHHhCeeeecCC
Confidence 556665543 4455555555665 778999998875433221111111 111111111 111
Q ss_pred C--------CCcHHHHHHHHHhhccch---hHHHHHhhcccCCCccc----------------ccccChhHHHHhhhccc
Q 020518 191 S--------IPSRKWLVNHMMELGFSK---SLSEWIGTNLKKSGERE----------------TWAFNLDGAVQMFNSYR 243 (325)
Q Consensus 191 ~--------~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~ 243 (325)
. .+........ ...+..+ .-.+++......+.+.. ...+-.+.....+..+.
T Consensus 241 ~ypg~gR~VYPGFlQlagF-msmNldrH~~aH~~~~~~Lv~~D~~~Ae~h~~FYdEYlavmdl~aEfYLqTid~VFqq~~ 319 (415)
T COG4553 241 PYPGFGRRVYPGFLQLAGF-MSMNLDRHIDAHKDFFLSLVKNDGDSAEKHREFYDEYLAVMDLTAEFYLQTIDEVFQQHA 319 (415)
T ss_pred CCCCccccccccHHHhhhH-hhcChhhhHHHHHHHHHHHHcccchhHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhc
Confidence 1 1111111111 1111111 00111111111110000 00011111111222111
Q ss_pred C--CcccccccCCC----CCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc---ChHHH
Q 020518 244 E--MSYWPLLEHPP----QGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD---NPKGL 314 (325)
Q Consensus 244 ~--~~~~~~~~~~~----~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e---~p~~~ 314 (325)
- -.....-..++ .++-.+-|-|+.|++...-+.+....+..++++. ..+...-+++||+..+. -.+++
T Consensus 320 LpkG~~vhrg~~vdp~~I~~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~---mk~hy~qp~vGHYGVFnGsrfr~eI 396 (415)
T COG4553 320 LPKGEMVHRGKPVDPTAITNVALFTVEGENDDISGVGQTKAAHDLCSNIPED---MKQHYMQPDVGHYGVFNGSRFREEI 396 (415)
T ss_pred ccCCceeecCCcCChhheeceeEEEeecccccccccchhHHHHHHHhcChHH---HHHHhcCCCCCccceeccchHHHHH
Confidence 0 00111111111 1345577899999998887788888888877653 24567779999998775 35788
Q ss_pred HHHHHHHHhc
Q 020518 315 LEIVAPRIAS 324 (325)
Q Consensus 315 ~~~i~~fl~~ 324 (325)
...|.+|+.+
T Consensus 397 vPri~dFI~~ 406 (415)
T COG4553 397 VPRIRDFIRR 406 (415)
T ss_pred HHHHHHHHHH
Confidence 8899999864
No 192
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.09 E-value=0.018 Score=52.33 Aligned_cols=110 Identities=13% Similarity=-0.015 Sum_probs=62.1
Q ss_pred CCceEEEecCCCCCCC----ChHHHHHHHHhhhhccCCCCceEEEEeCCC----CCCCCCCCCCCCCCCCHHHH---HHH
Q 020518 43 YTSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTSASSEWRMVLVDLR----NHGRSAEIEGLDPPHDIANA---AND 111 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~----G~G~S~~~~~~~~~~~~~~~---~~~ 111 (325)
..|++|+|||.+.... ....-...+.. ++.-||.+++| |+-.+.........+-+.|+ .+.
T Consensus 124 ~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~--------~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~W 195 (535)
T PF00135_consen 124 KLPVMVWIHGGGFMFGSGSFPPYDGASLAAS--------KDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKW 195 (535)
T ss_dssp SEEEEEEE--STTTSSCTTSGGGHTHHHHHH--------HTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHH
T ss_pred ccceEEEeecccccCCCcccccccccccccC--------CCEEEEEecccccccccccccccccCchhhhhhhhHHHHHH
Confidence 4699999999755332 12222333343 78899999998 33332221110023344444 345
Q ss_pred HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCC
Q 020518 112 LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPG 167 (325)
Q Consensus 112 l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~ 167 (325)
+.+-|...| .+ +|+|+|||.||..+...+.. |. ....+++.|+.++.+.
T Consensus 196 V~~nI~~FGGDp~-~VTl~G~SAGa~sv~~~l~s-p~-----~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 196 VQDNIAAFGGDPD-NVTLFGQSAGAASVSLLLLS-PS-----SKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHGGGGTEEEE-EEEEEEETHHHHHHHHHHHG-GG-----GTTSBSEEEEES--TT
T ss_pred HHhhhhhcccCCc-ceeeeeecccccccceeeec-cc-----cccccccccccccccc
Confidence 566666775 34 79999999999988877766 43 1238999999998643
No 193
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.03 E-value=0.019 Score=46.57 Aligned_cols=107 Identities=18% Similarity=0.082 Sum_probs=62.7
Q ss_pred CCCceEEEecCCCC--CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLG--SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---GRSAEIEGLDPPHDIANAANDLANLV 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~--~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~~l~~~l 116 (325)
..-|.+++.||--. +...+. +++.|... +....--++.+|.--- ..... . ....+..++++|.=++
T Consensus 96 ~k~pvl~~~DG~~~~~~g~i~~-~~dsli~~----g~i~pai~vgid~~d~~~R~~~~~--~--n~~~~~~L~~eLlP~v 166 (299)
T COG2382 96 EKYPVLYLQDGQDWFRSGRIPR-ILDSLIAA----GEIPPAILVGIDYIDVKKRREELH--C--NEAYWRFLAQELLPYV 166 (299)
T ss_pred ccccEEEEeccHHHHhcCChHH-HHHHHHHc----CCCCCceEEecCCCCHHHHHHHhc--c--cHHHHHHHHHHhhhhh
Confidence 34678899997532 222232 33333321 1113345555554321 00000 0 2234455555666666
Q ss_pred HHhC-----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 117 KAKG-----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 117 ~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++.- .+ .-+|.|-|+||.+++..+.++|+ ++..++..++..
T Consensus 167 ~~~yp~~~~a~-~r~L~G~SlGG~vsL~agl~~Pe--------~FG~V~s~Sps~ 212 (299)
T COG2382 167 EERYPTSADAD-GRVLAGDSLGGLVSLYAGLRHPE--------RFGHVLSQSGSF 212 (299)
T ss_pred hccCcccccCC-CcEEeccccccHHHHHHHhcCch--------hhceeeccCCcc
Confidence 5442 23 57899999999999999999999 999988888764
No 194
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.03 E-value=0.013 Score=46.15 Aligned_cols=94 Identities=17% Similarity=0.217 Sum_probs=60.2
Q ss_pred CceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHH
Q 020518 44 TSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDL----ANLV 116 (325)
Q Consensus 44 ~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l----~~~l 116 (325)
+..|-|+-|..-.+ -.|+.+.+.|++ +||.|++.-+. ...+-...|+.+ ...+
T Consensus 17 ~gvihFiGGaf~ga~P~itYr~lLe~La~--------~Gy~ViAtPy~------------~tfDH~~~A~~~~~~f~~~~ 76 (250)
T PF07082_consen 17 KGVIHFIGGAFVGAAPQITYRYLLERLAD--------RGYAVIATPYV------------VTFDHQAIAREVWERFERCL 76 (250)
T ss_pred CEEEEEcCcceeccCcHHHHHHHHHHHHh--------CCcEEEEEecC------------CCCcHHHHHHHHHHHHHHHH
Confidence 44566777763333 457788899997 99999998653 223333333332 2222
Q ss_pred HHh----CCC---CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 KAK----GWD---WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 ~~~----~~~---~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+.+ +.. -|++-+|||||+.+-+.+...++. .-++-++++-.
T Consensus 77 ~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~~~--------~r~gniliSFN 124 (250)
T PF07082_consen 77 RALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLFDV--------ERAGNILISFN 124 (250)
T ss_pred HHHHHhcCCCcccCCeeeeecccchHHHHHHhhhccC--------cccceEEEecC
Confidence 222 221 267889999999999998888765 44677777754
No 195
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=97.00 E-value=0.0064 Score=53.08 Aligned_cols=136 Identities=15% Similarity=0.096 Sum_probs=79.1
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhh---------------hccCCCCceEEEEeC-CCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTL---------------SQTSASSEWRMVLVD-LRNH 90 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~---------------~~~~~~~~~~vi~~D-~~G~ 90 (325)
+..++|.-+.+.....+.|.|+++.|.++++..+..+. ++.... ...+-++..+++.+| .-|.
T Consensus 49 ~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~g~~~-e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGt 127 (433)
T PLN03016 49 NVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLGGIIF-ENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPVGS 127 (433)
T ss_pred CeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHHHHHH-hcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCCCC
Confidence 45677777666545567899999999988776432211 111100 001123456899999 6699
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--CCccCCcceEEE
Q 020518 91 GRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--GQFVALPKQLWV 161 (325)
Q Consensus 91 G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~~~~~~v~~lvl 161 (325)
|.|..........+. +.++++..++... ... +++|.|.|.||..+-.+|..--++.. ......++++++
T Consensus 128 GfSy~~~~~~~~~d~-~~a~~~~~fl~~f~~~~p~~~~~-~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i 205 (433)
T PLN03016 128 GFSYSKTPIDKTGDI-SEVKRTHEFLQKWLSRHPQYFSN-PLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 205 (433)
T ss_pred CccCCCCCCCccCCH-HHHHHHHHHHHHHHHhChhhcCC-CEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe
Confidence 999754321111122 2335555555432 234 89999999999987777765322110 001125788888
Q ss_pred EecC
Q 020518 162 LDSV 165 (325)
Q Consensus 162 i~~~ 165 (325)
-++.
T Consensus 206 GNg~ 209 (433)
T PLN03016 206 GNPV 209 (433)
T ss_pred cCCC
Confidence 7765
No 196
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.00 E-value=0.055 Score=45.38 Aligned_cols=63 Identities=19% Similarity=0.250 Sum_probs=51.3
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-ChHHHHHHHHHHHhc
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-NPKGLLEIVAPRIAS 324 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-~p~~~~~~i~~fl~~ 324 (325)
.+.+.+.+..|.+++.+..+.+.++....+.. ++-+-+.++-|..+.. .|..+.+...+|+++
T Consensus 226 ~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~----v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~ 289 (350)
T KOG2521|consen 226 WNQLYLYSDNDDVLPADEIEKFIALRREKGVN----VKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRS 289 (350)
T ss_pred ccceeecCCccccccHHHHHHHHHHHHhcCce----EEEeeccCccceeeeccCcHHHHHHHHHHHHh
Confidence 46689999999999999998887776665432 6777778889998874 799999999999975
No 197
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.93 E-value=0.0026 Score=56.34 Aligned_cols=95 Identities=18% Similarity=0.129 Sum_probs=54.9
Q ss_pred ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh----CCCCCEEEEEeChhH
Q 020518 59 NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK----GWDWPDVVIGHSMGG 134 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg 134 (325)
.|..+++.|.. -||. -.++.|...--+.... ....-+++-..+..+++.. +-+ +++|+||||||
T Consensus 157 vw~kLIe~L~~--------iGY~--~~nL~gAPYDWRls~~-~le~rd~YF~rLK~lIE~ay~~nggk-KVVLV~HSMGg 224 (642)
T PLN02517 157 VWAVLIANLAR--------IGYE--EKNMYMAAYDWRLSFQ-NTEVRDQTLSRLKSNIELMVATNGGK-KVVVVPHSMGV 224 (642)
T ss_pred eHHHHHHHHHH--------cCCC--CCceeecccccccCcc-chhhhhHHHHHHHHHHHHHHHHcCCC-eEEEEEeCCch
Confidence 56889999987 7776 3444433222111100 1122355555566666543 335 99999999999
Q ss_pred HHHHHHHHHccc--cccCC-----ccCCcceEEEEecC
Q 020518 135 KVALHFAQSCAR--ADYGQ-----FVALPKQLWVLDSV 165 (325)
Q Consensus 135 ~~a~~~a~~~p~--~~~~~-----~~~~v~~lvli~~~ 165 (325)
.+++.+...... ...|. ....|++.|.++++
T Consensus 225 lv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp 262 (642)
T PLN02517 225 LYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGP 262 (642)
T ss_pred HHHHHHHHhccccccccCCcchHHHHHHHHHheecccc
Confidence 999998764221 00000 01257888888875
No 198
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=96.92 E-value=0.014 Score=52.01 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=68.2
Q ss_pred CCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC---CCCC--CCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA---EIEG--LDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~---~~~~--~~~~~~~~~~~~~l~~ 114 (325)
.++|.+|..+|.-+-+ -.|..-...|.+ .|+-....|.||=|.-. ...+ .....+++++.....-
T Consensus 468 g~~P~LLygYGay~isl~p~f~~srl~lld--------~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~Aey 539 (712)
T KOG2237|consen 468 GSKPLLLYGYGAYGISLDPSFRASRLSLLD--------RGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEY 539 (712)
T ss_pred CCCceEEEEecccceeeccccccceeEEEe--------cceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHH
Confidence 4567777666654422 233332222333 67777778899865432 2211 0034567777776666
Q ss_pred HHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 115 LVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 115 ~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
++++- ..+ +..+.|.|.||.++..++..+|+ .+..+|+-.|.
T Consensus 540 Lve~gyt~~~-kL~i~G~SaGGlLvga~iN~rPd--------LF~avia~Vpf 583 (712)
T KOG2237|consen 540 LVENGYTQPS-KLAIEGGSAGGLLVGACINQRPD--------LFGAVIAKVPF 583 (712)
T ss_pred HHHcCCCCcc-ceeEecccCccchhHHHhccCch--------HhhhhhhcCcc
Confidence 66643 234 79999999999999999999999 88887765554
No 199
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=96.91 E-value=0.0064 Score=52.65 Aligned_cols=130 Identities=18% Similarity=0.170 Sum_probs=76.7
Q ss_pred eEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhcc----------CCCCceEEEEeC-CCCCCCCCCCCC
Q 020518 30 LAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQT----------SASSEWRMVLVD-LRNHGRSAEIEG 98 (325)
Q Consensus 30 l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~----------~~~~~~~vi~~D-~~G~G~S~~~~~ 98 (325)
+.++.+.+.....++|.++++.|.++++..|..+.+.=-.+...+ +.+..-.++.+| .-|.|.|....+
T Consensus 87 ~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~ 166 (498)
T COG2939 87 FFFYTFESPNDPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGD 166 (498)
T ss_pred EEEEEecCCCCCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccccc
Confidence 334444443444578999999999999988766543111111000 011223689999 669999985221
Q ss_pred CCCCCCHHHHHHHHHHHHHHh--------CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 99 LDPPHDIANAANDLANLVKAK--------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 99 ~~~~~~~~~~~~~l~~~l~~~--------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+..-+.....+|+..+++.. .+-.+.+|+|.|+||.-+..+|..--++. ...++++++.+.
T Consensus 167 -e~~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~-----~~~~~~~nlssv 235 (498)
T COG2939 167 -EKKKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDN-----IALNGNVNLSSV 235 (498)
T ss_pred -ccccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhc-----cccCCceEeeee
Confidence 13445555555555544322 22228999999999999999887654410 024555555543
No 200
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.84 E-value=0.026 Score=44.59 Aligned_cols=52 Identities=23% Similarity=0.227 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 109 ANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 109 ~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++-+..+++.. .+ ++++.|||.||.+|..++...++... .+|.+++..+++.
T Consensus 72 ~~yl~~~~~~~-~~-~i~v~GHSkGGnLA~yaa~~~~~~~~----~rI~~vy~fDgPG 123 (224)
T PF11187_consen 72 LAYLKKIAKKY-PG-KIYVTGHSKGGNLAQYAAANCDDEIQ----DRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHhC-CC-CEEEEEechhhHHHHHHHHHccHHHh----hheeEEEEeeCCC
Confidence 33444444443 34 79999999999999999988543111 2789999999864
No 201
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.79 E-value=0.0025 Score=46.58 Aligned_cols=119 Identities=15% Similarity=0.120 Sum_probs=71.7
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHH--HHHHHHhhhhccCCCCc-eEEEEeCCCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRS--FSRNLASTLSQTSASSE-WRMVLVDLRNHGRSAEIEGLDPPH 103 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~--~~~~l~~~~~~~~~~~~-~~vi~~D~~G~G~S~~~~~~~~~~ 103 (325)
++.+.+..+|.. +.+||+++--++....|+. .+..|++... .| ...++++ |-..-+-........
T Consensus 14 ~RdMel~ryGHa-----G~pVvvFpts~Grf~eyed~G~v~ala~fie-----~G~vQlft~~--gldsESf~a~h~~~a 81 (227)
T COG4947 14 NRDMELNRYGHA-----GIPVVVFPTSGGRFNEYEDFGMVDALASFIE-----EGLVQLFTLS--GLDSESFLATHKNAA 81 (227)
T ss_pred cchhhhhhccCC-----CCcEEEEecCCCcchhhhhcccHHHHHHHHh-----cCcEEEEEec--ccchHhHhhhcCCHH
Confidence 456677778875 6677777777776666654 3566665542 33 3444443 332211111000111
Q ss_pred CHHHHHHHHHHHH-HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 104 DIANAANDLANLV-KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 104 ~~~~~~~~l~~~l-~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+-...-+.+.+.+ ++.-+. +.++-|.||||.-|..+..++|+ ...++|.+++..
T Consensus 82 dr~~rH~AyerYv~eEalpg-s~~~sgcsmGayhA~nfvfrhP~--------lftkvialSGvY 136 (227)
T COG4947 82 DRAERHRAYERYVIEEALPG-STIVSGCSMGAYHAANFVFRHPH--------LFTKVIALSGVY 136 (227)
T ss_pred HHHHHHHHHHHHHHHhhcCC-CccccccchhhhhhhhhheeChh--------Hhhhheeeccee
Confidence 1122223333433 444444 78889999999999999999999 999999998764
No 202
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.75 E-value=0.0032 Score=50.06 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=38.5
Q ss_pred HHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 110 NDLANLVKAK---GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 110 ~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.+.-++++- +.+ +-.++|||+||.+++.....+|+ .+...++++|+.
T Consensus 122 ~~lkP~Ie~~y~~~~~-~~~i~GhSlGGLfvl~aLL~~p~--------~F~~y~~~SPSl 172 (264)
T COG2819 122 EQLKPFIEARYRTNSE-RTAIIGHSLGGLFVLFALLTYPD--------CFGRYGLISPSL 172 (264)
T ss_pred HhhHHHHhcccccCcc-cceeeeecchhHHHHHHHhcCcc--------hhceeeeecchh
Confidence 3444555542 334 68999999999999999999999 999999999874
No 203
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=96.69 E-value=0.0054 Score=48.92 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=19.8
Q ss_pred CEEEEEeChhHHHHHHHHHHcc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
++++.|||+||.+|..++....
T Consensus 129 ~i~vtGHSLGGaiA~l~a~~l~ 150 (229)
T cd00519 129 KIIVTGHSLGGALASLLALDLR 150 (229)
T ss_pred eEEEEccCHHHHHHHHHHHHHH
Confidence 8999999999999999888754
No 204
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.68 E-value=0.0023 Score=38.99 Aligned_cols=39 Identities=23% Similarity=0.389 Sum_probs=22.6
Q ss_pred ccccccceEEEEcccCC----CCCCCceEEEecCCCCCCCChH
Q 020518 23 TTRSLQTLAYEEVRSSS----DRPYTSTAFVLHGLLGSGRNWR 61 (325)
Q Consensus 23 ~~~~~~~l~y~~~~~~~----~~~~~~~vv~~HG~~~~~~~~~ 61 (325)
+++||.-|.......+. ....+|+|++.||+.+++..|-
T Consensus 18 ~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~wv 60 (63)
T PF04083_consen 18 TTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDWV 60 (63)
T ss_dssp E-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGGC
T ss_pred EeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHHH
Confidence 34678777766655443 4467899999999999998883
No 205
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.62 E-value=0.023 Score=49.11 Aligned_cols=109 Identities=18% Similarity=0.170 Sum_probs=79.1
Q ss_pred CCCceEEEecCCCCCCCChHH----HHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC----CCCCHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWRS----FSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD----PPHDIANAANDLA 113 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~----~~~~~~~~~~~l~ 113 (325)
+++|..++|-|=+.-...|-. ..-.+++.+ |-.|+-+.+|=+|.|.+..+.. ...+..+...|+.
T Consensus 84 ~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~Akkf-------gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla 156 (514)
T KOG2182|consen 84 PGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKF-------GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLA 156 (514)
T ss_pred CCCceEEEEcCCCCCCCCccccCcchHHHHHHHh-------CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHH
Confidence 457777888777665555521 233445443 5599999999999986654321 2347888899999
Q ss_pred HHHHHhCCC------CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 114 NLVKAKGWD------WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 114 ~~l~~~~~~------~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+|+++..+ .+++.+|-|+-|.++..+=.+||+ .+.+-|.-+++
T Consensus 157 ~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe--------l~~GsvASSap 206 (514)
T KOG2182|consen 157 EFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE--------LTVGSVASSAP 206 (514)
T ss_pred HHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch--------hheeecccccc
Confidence 999877321 289999999999999999999999 77776655543
No 206
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.50 E-value=0.0081 Score=46.28 Aligned_cols=67 Identities=12% Similarity=0.059 Sum_probs=47.3
Q ss_pred CceEEEEeCCCCCCCCCCC-CC-----CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 78 SEWRMVLVDLRNHGRSAEI-EG-----LDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~-~~-----~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.-.+|+++=+|-....... .. ........|..+....+|++.+-+++++|+|||-|+.++.++..++
T Consensus 44 ~~~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 44 GVCNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred cCCccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 4458888887754322221 10 0023356677777888888887777999999999999999999876
No 207
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=96.42 E-value=0.0018 Score=44.75 Aligned_cols=37 Identities=27% Similarity=0.342 Sum_probs=23.1
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHH
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFS 64 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~ 64 (325)
+|..|+|....+. .++..||||+|||++|-..|.+++
T Consensus 76 ~g~~iHFih~rs~--~~~aiPLll~HGWPgSf~Ef~~vI 112 (112)
T PF06441_consen 76 DGLDIHFIHVRSK--RPNAIPLLLLHGWPGSFLEFLKVI 112 (112)
T ss_dssp TTEEEEEEEE--S---TT-EEEEEE--SS--GGGGHHHH
T ss_pred eeEEEEEEEeeCC--CCCCeEEEEECCCCccHHhHHhhC
Confidence 4889999987763 346789999999999887776653
No 208
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.41 E-value=0.0065 Score=52.10 Aligned_cols=71 Identities=25% Similarity=0.318 Sum_probs=46.0
Q ss_pred ChHHHHHHHHhhhhccCCCCceE------EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH----HHhCCCCCEEEE
Q 020518 59 NWRSFSRNLASTLSQTSASSEWR------MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV----KAKGWDWPDVVI 128 (325)
Q Consensus 59 ~~~~~~~~l~~~~~~~~~~~~~~------vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~lv 128 (325)
.|..++..|.. -||. -..+|+|= |.. .....+++...+...+ +.-|-+ +++||
T Consensus 125 ~w~~~i~~lv~--------~GYe~~~~l~ga~YDwRl---s~~-----~~e~rd~yl~kLK~~iE~~~~~~G~k-kVvli 187 (473)
T KOG2369|consen 125 YWHELIENLVG--------IGYERGKTLFGAPYDWRL---SYH-----NSEERDQYLSKLKKKIETMYKLNGGK-KVVLI 187 (473)
T ss_pred HHHHHHHHHHh--------hCcccCceeeccccchhh---ccC-----ChhHHHHHHHHHHHHHHHHHHHcCCC-ceEEE
Confidence 67778887775 4554 33567662 111 1223344444444444 444556 99999
Q ss_pred EeChhHHHHHHHHHHccc
Q 020518 129 GHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 129 GhS~Gg~~a~~~a~~~p~ 146 (325)
+||||+.+.+.+...+++
T Consensus 188 sHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 188 SHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred ecCCccHHHHHHHhcccc
Confidence 999999999999988876
No 209
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=96.39 E-value=0.43 Score=43.18 Aligned_cols=109 Identities=17% Similarity=0.128 Sum_probs=71.1
Q ss_pred CCCceEEEecCCCCCC--CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC---CC--CCCCCCHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSG--RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI---EG--LDPPHDIANAANDLAN 114 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~--~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~---~~--~~~~~~~~~~~~~l~~ 114 (325)
.+.|.++..=|.-+.+ ..|....-.|.+ +|+-.-...-||=|.=... .+ .....++.++.+....
T Consensus 446 g~~p~lLygYGaYG~s~~p~Fs~~~lSLlD--------RGfiyAIAHVRGGgelG~~WYe~GK~l~K~NTf~DFIa~a~~ 517 (682)
T COG1770 446 GSAPLLLYGYGAYGISMDPSFSIARLSLLD--------RGFVYAIAHVRGGGELGRAWYEDGKLLNKKNTFTDFIAAARH 517 (682)
T ss_pred CCCcEEEEEeccccccCCcCcccceeeeec--------CceEEEEEEeecccccChHHHHhhhhhhccccHHHHHHHHHH
Confidence 4566666666654432 233333333443 6765555566775432211 00 1156788999888888
Q ss_pred HHHHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 115 LVKAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 115 ~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++++--.+ ..++++|-|.||++.-..+...|+ .++++|+--|..
T Consensus 518 Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~--------lf~~iiA~VPFV 562 (682)
T COG1770 518 LVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPD--------LFAGIIAQVPFV 562 (682)
T ss_pred HHHcCcCCccceEEeccCchhHHHHHHHhhChh--------hhhheeecCCcc
Confidence 88764322 279999999999999999999999 999998766653
No 210
>PLN02162 triacylglycerol lipase
Probab=96.38 E-value=0.011 Score=51.00 Aligned_cols=37 Identities=22% Similarity=0.270 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
..++.+.+.+++.+.... ++++.|||+||.+|..+|.
T Consensus 261 y~~I~~~L~~lL~k~p~~-kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 261 YYTIRQMLRDKLARNKNL-KYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHHHhCCCc-eEEEEecChHHHHHHHHHH
Confidence 445556667777665545 8999999999999998865
No 211
>PLN00413 triacylglycerol lipase
Probab=96.30 E-value=0.014 Score=50.59 Aligned_cols=38 Identities=21% Similarity=0.353 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..++.+.+..++++.... ++++.|||+||++|..+|..
T Consensus 267 yy~i~~~Lk~ll~~~p~~-kliVTGHSLGGALAtLaA~~ 304 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTS-KFILSGHSLGGALAILFTAV 304 (479)
T ss_pred HHHHHHHHHHHHHHCCCC-eEEEEecCHHHHHHHHHHHH
Confidence 445667788888776655 89999999999999998853
No 212
>PLN02454 triacylglycerol lipase
Probab=96.26 E-value=0.0098 Score=50.79 Aligned_cols=37 Identities=22% Similarity=0.227 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 108 AANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 108 ~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+...+..+++...-. .++++.||||||.+|+.+|...
T Consensus 212 vl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di 249 (414)
T PLN02454 212 LLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDI 249 (414)
T ss_pred HHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHH
Confidence 344455555544333 1399999999999999998664
No 213
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.24 E-value=0.061 Score=39.10 Aligned_cols=77 Identities=14% Similarity=0.107 Sum_probs=51.4
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceE-EEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWR-MVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
..||.+-||+..+..+..++ +. +++. ++++|+...... .++.. .+
T Consensus 12 ~LIvyFaGwgtpps~v~HLi--lp---------eN~dl~lcYDY~dl~ld---------fDfsA-------------y~- 57 (214)
T COG2830 12 HLIVYFAGWGTPPSAVNHLI--LP---------ENHDLLLCYDYQDLNLD---------FDFSA-------------YR- 57 (214)
T ss_pred EEEEEEecCCCCHHHHhhcc--CC---------CCCcEEEEeehhhcCcc---------cchhh-------------hh-
Confidence 37888999998877665543 12 4444 567887643321 11111 24
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+-||++|||-.+|-++.... +.++.+.+++.
T Consensus 58 hirlvAwSMGVwvAeR~lqg~----------~lksatAiNGT 89 (214)
T COG2830 58 HIRLVAWSMGVWVAERVLQGI----------RLKSATAINGT 89 (214)
T ss_pred hhhhhhhhHHHHHHHHHHhhc----------cccceeeecCC
Confidence 678999999999999998876 56777777765
No 214
>PLN02571 triacylglycerol lipase
Probab=96.11 E-value=0.012 Score=50.40 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+++..+++..... .++++.||||||.+|...|...
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~dl 247 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVDI 247 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHHH
Confidence 55667777877765432 2689999999999999988763
No 215
>PLN02408 phospholipase A1
Probab=95.98 E-value=0.015 Score=49.02 Aligned_cols=40 Identities=23% Similarity=0.315 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHccc
Q 020518 107 NAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
++.+++..++++..-. .++++.|||+||.+|..+|.....
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~ 223 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKT 223 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHH
Confidence 4456677777765433 259999999999999998876543
No 216
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.86 E-value=0.0096 Score=50.12 Aligned_cols=91 Identities=16% Similarity=0.150 Sum_probs=54.8
Q ss_pred CCceEEEecCCCC-CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 43 YTSTAFVLHGLLG-SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 43 ~~~~vv~~HG~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
.+-.+|+.||+-+ +...|...+....... .+..++ .+|+-............--+..++++.+.+....+
T Consensus 79 ~~HLvVlthGi~~~~~~~~~~~~~~~~kk~------p~~~iv---~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si 149 (405)
T KOG4372|consen 79 PKHLVVLTHGLHGADMEYWKEKIEQMTKKM------PDKLIV---VRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSI 149 (405)
T ss_pred CceEEEeccccccccHHHHHHHHHhhhcCC------CcceEe---eeccccchhhccccceeeecccHHHHhhhhhcccc
Confidence 3457899999987 5667777776666543 344333 33433222221101122234455556666665667
Q ss_pred CCCEEEEEeChhHHHHHHHHHH
Q 020518 122 DWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 122 ~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+ ++-++|||+||.++..+...
T Consensus 150 ~-kISfvghSLGGLvar~AIgy 170 (405)
T KOG4372|consen 150 E-KISFVGHSLGGLVARYAIGY 170 (405)
T ss_pred c-eeeeeeeecCCeeeeEEEEe
Confidence 8 99999999999987765543
No 217
>PLN02310 triacylglycerol lipase
Probab=95.80 E-value=0.019 Score=49.02 Aligned_cols=39 Identities=28% Similarity=0.326 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+.+..+++... .+.++++.|||+||.+|..+|...
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl 230 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEA 230 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHH
Confidence 455667777776552 233799999999999999988653
No 218
>PLN02934 triacylglycerol lipase
Probab=95.61 E-value=0.023 Score=49.65 Aligned_cols=38 Identities=32% Similarity=0.437 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
..++.+.+..++++.... ++++.|||+||.+|..+|..
T Consensus 304 y~~v~~~lk~ll~~~p~~-kIvVTGHSLGGALAtLaA~~ 341 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNA-KFVVTGHSLGGALAILFPTV 341 (515)
T ss_pred HHHHHHHHHHHHHHCCCC-eEEEeccccHHHHHHHHHHH
Confidence 445667777777776555 89999999999999998753
No 219
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=95.57 E-value=0.025 Score=42.69 Aligned_cols=65 Identities=15% Similarity=0.211 Sum_probs=52.9
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccC---hHHHHHHHHHHHhc
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDN---PKGLLEIVAPRIAS 324 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~---p~~~~~~i~~fl~~ 324 (325)
+++.+-|-|+.|++..+-+......+..+++.. ....++.+||||+-.+.- .+++.-.|.+|+.+
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~---~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~ 201 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPAD---MKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQ 201 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHH---HhhhcccCCCCeeecccchhhhhhhhHHHHHHHHh
Confidence 367788999999999998888888898887653 356778899999987753 47888899999864
No 220
>PLN02324 triacylglycerol lipase
Probab=95.52 E-value=0.029 Score=48.01 Aligned_cols=38 Identities=18% Similarity=0.244 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhCCC-CCEEEEEeChhHHHHHHHHHHc
Q 020518 107 NAANDLANLVKAKGWD-WPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
++.+.|..+++...-. .++++.|||+||.+|...|...
T Consensus 198 qVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~dl 236 (415)
T PLN02324 198 QVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAADL 236 (415)
T ss_pred HHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHHH
Confidence 3455677777765432 2699999999999999998653
No 221
>PLN03037 lipase class 3 family protein; Provisional
Probab=95.42 E-value=0.029 Score=49.15 Aligned_cols=39 Identities=26% Similarity=0.314 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhC---CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG---WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~---~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
++..+++..+++... .+.++++.|||+||.+|+..|...
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DI 339 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEA 339 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHH
Confidence 445677777776653 233699999999999999988653
No 222
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.29 E-value=0.057 Score=41.10 Aligned_cols=108 Identities=11% Similarity=0.009 Sum_probs=55.3
Q ss_pred eEEEecCCCCCCCC---hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh---
Q 020518 46 TAFVLHGLLGSGRN---WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK--- 119 (325)
Q Consensus 46 ~vv~~HG~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~--- 119 (325)
-||+..|-+..... -..+...+.+..+. ....+..+++|-..... . ...+..+=+.++...++..
T Consensus 7 ~vi~aRGT~E~~g~~~~g~~~~~~l~~~~g~----~~~~~~~V~YpA~~~~~---~--y~~S~~~G~~~~~~~i~~~~~~ 77 (179)
T PF01083_consen 7 HVIFARGTGEPPGVGRVGPPFADALQAQPGG----TSVAVQGVEYPASLGPN---S--YGDSVAAGVANLVRLIEEYAAR 77 (179)
T ss_dssp EEEEE--TTSSTTTCCCHHHHHHHHHHHCTT----CEEEEEE--S---SCGG---S--CHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCCCCCCCccccHHHHHHHHhhcCC----CeeEEEecCCCCCCCcc---c--ccccHHHHHHHHHHHHHHHHHh
Confidence 35566665543322 22345555544311 34566667766322211 0 1224444444454444432
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHH--ccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQS--CARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~--~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
.++.+++|+|+|.|+.++..++.. .+.. ...+|.++++++-+.
T Consensus 78 CP~~kivl~GYSQGA~V~~~~~~~~~l~~~----~~~~I~avvlfGdP~ 122 (179)
T PF01083_consen 78 CPNTKIVLAGYSQGAMVVGDALSGDGLPPD----VADRIAAVVLFGDPR 122 (179)
T ss_dssp STTSEEEEEEETHHHHHHHHHHHHTTSSHH----HHHHEEEEEEES-TT
T ss_pred CCCCCEEEEecccccHHHHHHHHhccCChh----hhhhEEEEEEecCCc
Confidence 345489999999999999999877 2210 112789999988653
No 223
>PLN02753 triacylglycerol lipase
Probab=95.22 E-value=0.038 Score=48.56 Aligned_cols=39 Identities=31% Similarity=0.432 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHHhCC----CCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGW----DWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~----~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++...+..++++... +.++++.|||+||.+|...|...
T Consensus 291 eQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dl 333 (531)
T PLN02753 291 EQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDI 333 (531)
T ss_pred HHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHH
Confidence 4455666777766532 33899999999999999998653
No 224
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=95.17 E-value=0.14 Score=41.88 Aligned_cols=143 Identities=18% Similarity=0.057 Sum_probs=83.4
Q ss_pred cccccceEEEEcccCCCC-CCCceEEEecCCCCCCC----ChHHHHHHHHhhhhccC-CCCceEEEEeCCC-CCCCCCCC
Q 020518 24 TRSLQTLAYEEVRSSSDR-PYTSTAFVLHGLLGSGR----NWRSFSRNLASTLSQTS-ASSEWRMVLVDLR-NHGRSAEI 96 (325)
Q Consensus 24 ~~~~~~l~y~~~~~~~~~-~~~~~vv~~HG~~~~~~----~~~~~~~~l~~~~~~~~-~~~~~~vi~~D~~-G~G~S~~~ 96 (325)
++++..+.|.-|-...+. ..+|..+.+.|.++.+. .|+.+-+.=.....+.. -.+.-.++.+|-| |.|.|.-.
T Consensus 10 vr~~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~adllfvDnPVGaGfSyVd 89 (414)
T KOG1283|consen 10 VRTGAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKDADLLFVDNPVGAGFSYVD 89 (414)
T ss_pred eecCceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhhccEEEecCCCcCceeeec
Confidence 345556665554443332 45677788999877553 23332211000000000 0023467888866 88888765
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHccccccCC-ccCCcceEEEEecCCC
Q 020518 97 EGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADYGQ-FVALPKQLWVLDSVPG 167 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~-~~~~v~~lvli~~~~~ 167 (325)
.......+.++++.|+.++++.+ .-. |++++..|.||-+|..++...-+..... -.....+++|=++...
T Consensus 90 g~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~-P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 90 GSSAYTTNNKQIALDLVELLKGFFTNHPEFKTV-PLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred CcccccccHHHHHHHHHHHHHHHHhcCcccccc-ceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 44224457889999999999876 233 8999999999999999887654311111 1114566777666543
No 225
>PLN02761 lipase class 3 family protein
Probab=95.16 E-value=0.041 Score=48.30 Aligned_cols=39 Identities=28% Similarity=0.364 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHHhC-----CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG-----WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~-----~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++.+.|..+++... .+.++++.|||+||.+|...|...
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DI 315 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDI 315 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHH
Confidence 445666777776652 223699999999999999988643
No 226
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=95.10 E-value=0.083 Score=44.42 Aligned_cols=43 Identities=21% Similarity=0.327 Sum_probs=31.9
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+.. |++|||||+|+.+.+.....-.+. .....|+.+++++++.
T Consensus 218 G~R-pVtLvG~SLGarvI~~cL~~L~~~---~~~~lVe~VvL~Gapv 260 (345)
T PF05277_consen 218 GER-PVTLVGHSLGARVIYYCLLELAER---KAFGLVENVVLMGAPV 260 (345)
T ss_pred CCC-ceEEEeecccHHHHHHHHHHHHhc---cccCeEeeEEEecCCC
Confidence 444 899999999999998887766552 1112589999998764
No 227
>PLN02802 triacylglycerol lipase
Probab=95.06 E-value=0.046 Score=47.86 Aligned_cols=40 Identities=25% Similarity=0.346 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHHhCC-CCCEEEEEeChhHHHHHHHHHHcc
Q 020518 106 ANAANDLANLVKAKGW-DWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~-~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+++.+++..+++...- +.++++.|||+||.+|...|...-
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL~ 352 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADELA 352 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHHH
Confidence 3455667777766532 226899999999999999887643
No 228
>PLN02719 triacylglycerol lipase
Probab=94.91 E-value=0.051 Score=47.61 Aligned_cols=39 Identities=28% Similarity=0.403 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+++...|..+++... .+.++++.|||+||.+|...|...
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHH
Confidence 345566666666543 223799999999999999988654
No 229
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=94.75 E-value=0.12 Score=43.12 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=41.6
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|..+|.+..|++++|+........+++ ...+.++|+..|... +..+.+.|..|+.
T Consensus 330 lpKyivnaSgDdff~pDsa~lYyd~LPG-------~kaLrmvPN~~H~~~---n~~i~esl~~fln 385 (507)
T COG4287 330 LPKYIVNASGDDFFVPDSANLYYDDLPG-------EKALRMVPNDPHNLI---NQFIKESLEPFLN 385 (507)
T ss_pred ccceeecccCCcccCCCccceeeccCCC-------ceeeeeCCCCcchhh---HHHHHHHHHHHHH
Confidence 6889999999999999877666555554 267888999999765 3455556666654
No 230
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=94.69 E-value=0.29 Score=44.69 Aligned_cols=104 Identities=14% Similarity=0.107 Sum_probs=60.1
Q ss_pred CceEEEecCCCCCCCC---hHHH--HHHHHhhhhccCCCCceEEEEeCCC----CC---CCCCCCCCCCCCCCHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRN---WRSF--SRNLASTLSQTSASSEWRMVLVDLR----NH---GRSAEIEGLDPPHDIANAAND 111 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~---~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~----G~---G~S~~~~~~~~~~~~~~~~~~ 111 (325)
-|++|++||.+-.... +... ...+.. ++.-|+.+.+| |+ |.+.. + ..+.+.|+...
T Consensus 112 ~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~--------~~VVvVt~~YRLG~lGF~st~d~~~-~---gN~gl~Dq~~A 179 (545)
T KOG1516|consen 112 LPVMVYIHGGGFQFGSASSFEIISPAYVLLL--------KDVVVVTINYRLGPLGFLSTGDSAA-P---GNLGLFDQLLA 179 (545)
T ss_pred CCEEEEEeCCceeeccccchhhcCchhcccc--------CCEEEEEecccceeceeeecCCCCC-C---CcccHHHHHHH
Confidence 6889999998653322 2111 111121 45567777766 33 22222 2 34555555444
Q ss_pred ---HHHHHHHhC--CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 112 ---LANLVKAKG--WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 112 ---l~~~l~~~~--~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..-|...| .+ +++|+|||.||..+..+... |.. ..++.+.|..++..
T Consensus 180 L~wv~~~I~~FGGdp~-~vTl~G~saGa~~v~~l~~S-p~s-----~~LF~~aI~~SG~~ 232 (545)
T KOG1516|consen 180 LRWVKDNIPSFGGDPK-NVTLFGHSAGAASVSLLTLS-PHS-----RGLFHKAISMSGNA 232 (545)
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeechhHHHHHHHhcC-Hhh-----HHHHHHHHhhcccc
Confidence 455555664 44 89999999999998777653 220 01567777776653
No 231
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=94.13 E-value=0.25 Score=41.59 Aligned_cols=67 Identities=13% Similarity=0.067 Sum_probs=48.4
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CCC------CC-ceeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DGS------EG-KVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~~------~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
+++||+..|..|-+++....+.+...+.-.+ +.. .. +.+++.+-+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4789999999998888766555544443100 000 01 278888999999997 59999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
+|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99864
No 232
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=94.09 E-value=0.12 Score=44.01 Aligned_cols=105 Identities=20% Similarity=0.032 Sum_probs=79.2
Q ss_pred CCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh--
Q 020518 42 PYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK-- 119 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-- 119 (325)
.++|+|+..-|++.+...... ++...+ +-+-+.+.+|=+|.|.+.+..=...++++-++|.+.+++++
T Consensus 61 ~drPtV~~T~GY~~~~~p~r~---Ept~Ll-------d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~ 130 (448)
T PF05576_consen 61 FDRPTVLYTEGYNVSTSPRRS---EPTQLL-------DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKP 130 (448)
T ss_pred CCCCeEEEecCcccccCcccc---chhHhh-------ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHh
Confidence 357899999999886543332 333332 22778999999999987653224568999999998888766
Q ss_pred -CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 120 -GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 120 -~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+ +.+--|-|=||+.++.+=.-||+ -|.+.|.--.+
T Consensus 131 iY~~-kWISTG~SKGGmTa~y~rrFyP~--------DVD~tVaYVAP 168 (448)
T PF05576_consen 131 IYPG-KWISTGGSKGGMTAVYYRRFYPD--------DVDGTVAYVAP 168 (448)
T ss_pred hccC-CceecCcCCCceeEEEEeeeCCC--------CCCeeeeeecc
Confidence 345 89999999999999999999999 88887764443
No 233
>PLN02847 triacylglycerol lipase
Probab=93.92 E-value=0.12 Score=46.17 Aligned_cols=20 Identities=30% Similarity=0.471 Sum_probs=18.1
Q ss_pred CEEEEEeChhHHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+++++|||+||.+|..++..
T Consensus 252 kLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 252 KIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 79999999999999988765
No 234
>PRK12467 peptide synthase; Provisional
Probab=93.34 E-value=0.96 Score=51.41 Aligned_cols=104 Identities=17% Similarity=0.140 Sum_probs=74.1
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
.+.|++.|...++...+..+...+. .+..++.+..++.-.... ...++++++....+.+......+
T Consensus 3692 ~~~l~~~h~~~r~~~~~~~l~~~l~---------~~~~~~~l~~~~~~~d~~-----~~~~~~~~~~~y~~~~~~~~~~~ 3757 (3956)
T PRK12467 3692 FPALFCRHEGLGTVFDYEPLAVILE---------GDRHVLGLTCRHLLDDGW-----QDTSLQAMAVQYADYILWQQAKG 3757 (3956)
T ss_pred ccceeeechhhcchhhhHHHHHHhC---------CCCcEEEEeccccccccC-----CccchHHHHHHHHHHHHHhccCC
Confidence 3569999999988887777776665 566888887765532222 24578888888888888776665
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+..+.|+|+||.++..++..--. ..+.+.-+.+++..+
T Consensus 3758 p~~l~g~s~g~~~a~~~~~~l~~-----~g~~~~~~~~~~~~~ 3795 (3956)
T PRK12467 3758 PYGLLGWSLGGTLARLVAELLER-----EGESEAFLGLFDNTL 3795 (3956)
T ss_pred CeeeeeeecchHHHHHHHHHHHH-----cCCceeEEEEEeccc
Confidence 89999999999999988865322 012566666665443
No 235
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.11 E-value=0.18 Score=42.71 Aligned_cols=38 Identities=26% Similarity=0.358 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 106 ANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
..+.+++..+++... +-++.+-|||+||.+|..+|..-
T Consensus 155 ~~~~~~~~~L~~~~~-~~~i~vTGHSLGgAlA~laa~~i 192 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP-NYSIWVTGHSLGGALASLAALDL 192 (336)
T ss_pred HHHHHHHHHHHHhcC-CcEEEEecCChHHHHHHHHHHHH
Confidence 567777778787776 44899999999999999888764
No 236
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.33 E-value=1.2 Score=35.34 Aligned_cols=66 Identities=23% Similarity=0.231 Sum_probs=41.7
Q ss_pred ceEEEEeCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHh-CCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 79 EWRMVLVDLRNH-GRSAEIEGLDPPHDIANAANDLANLVKAK-GWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 79 ~~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
|+.+..+++|.. +--..........+..+=++.+.+.++.. ..+.+++++|+|.|+.++..++.+.
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l 69 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRL 69 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHH
Confidence 567777777761 11000011013456666677777777652 2334899999999999999888765
No 237
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.74 E-value=0.53 Score=42.03 Aligned_cols=62 Identities=27% Similarity=0.351 Sum_probs=36.1
Q ss_pred CHHHHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccc---cCCccCCcceEEEEecC
Q 020518 104 DIANAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARAD---YGQFVALPKQLWVLDSV 165 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~---~~~~~~~v~~lvli~~~ 165 (325)
++..-...+...+.+. |-+++++.+||||||.++=.+....-+.. ....-...+++|+++.+
T Consensus 505 sl~~Rs~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~P 571 (697)
T KOG2029|consen 505 SLAARSNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVP 571 (697)
T ss_pred HHHHHHHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecC
Confidence 4444444555555544 33468999999999998877665432100 00011145678887765
No 238
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.56 E-value=1.2 Score=37.44 Aligned_cols=84 Identities=13% Similarity=0.144 Sum_probs=51.2
Q ss_pred EEEEeCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh-------CCCCCEEEEEeChhHHHHHHHHHHcccccc--C
Q 020518 81 RMVLVDLR-NHGRSAEIEGLDPPHDIANAANDLANLVKAK-------GWDWPDVVIGHSMGGKVALHFAQSCARADY--G 150 (325)
Q Consensus 81 ~vi~~D~~-G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~-------~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~--~ 150 (325)
+++.+|.| |.|.|...... ...+-++.++|+..+|+.. .-. +++|.|-|.||..+-.+|.+--++.. +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~-~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~-~fyI~GESYaG~YiP~la~~I~~~n~~~~ 80 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPI-DKTGDISEVKRTHEFLQKWLSRHPQYFSN-PLYVVGDSYSGMIVPALVQEISQGNYICC 80 (319)
T ss_pred cEEEecCCCCCCCCCCCCCC-CccccHHHHHHHHHHHHHHHHhCcccccC-CeEEEeeccccchHHHHHHHHHhhccccc
Confidence 78999988 99999754321 1112223446666655542 334 89999999999988877765422110 0
Q ss_pred CccCCcceEEEEecCC
Q 020518 151 QFVALPKQLWVLDSVP 166 (325)
Q Consensus 151 ~~~~~v~~lvli~~~~ 166 (325)
.....++++++-++..
T Consensus 81 ~~~inLkGi~IGNg~t 96 (319)
T PLN02213 81 EPPINLQGYMLGNPVT 96 (319)
T ss_pred CCceeeeEEEeCCCCC
Confidence 0112567887777653
No 239
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=90.30 E-value=2.7 Score=37.58 Aligned_cols=77 Identities=17% Similarity=0.066 Sum_probs=53.0
Q ss_pred CceEEEEeCCCCCCCCCC--CCCCCCCCC-----------HHHHHHHHHHHHHHh---CCCCCEEEEEeChhHHHHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAE--IEGLDPPHD-----------IANAANDLANLVKAK---GWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~--~~~~~~~~~-----------~~~~~~~l~~~l~~~---~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
.||.+++=|- ||..+.. ... ...+ +.+.+.--+++++.. ..+ .-+..|.|-||.-++..|
T Consensus 58 ~G~A~~~TD~-Gh~~~~~~~~~~--~~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~-~sY~~GcS~GGRqgl~~A 133 (474)
T PF07519_consen 58 RGYATASTDS-GHQGSAGSDDAS--FGNNPEALLDFAYRALHETTVVAKALIEAFYGKAPK-YSYFSGCSTGGRQGLMAA 133 (474)
T ss_pred cCeEEEEecC-CCCCCccccccc--ccCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCC-ceEEEEeCCCcchHHHHH
Confidence 8999999996 7765543 111 1122 222223334444444 334 689999999999999999
Q ss_pred HHccccccCCccCCcceEEEEecCC
Q 020518 142 QSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 142 ~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
++||+ ..++++.-+|..
T Consensus 134 QryP~--------dfDGIlAgaPA~ 150 (474)
T PF07519_consen 134 QRYPE--------DFDGILAGAPAI 150 (474)
T ss_pred HhChh--------hcCeEEeCCchH
Confidence 99999 899999877653
No 240
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=89.08 E-value=0.58 Score=37.73 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
-||...+.++.++.++.|-|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T COG5153 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445556666668999999999999999988873
No 241
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=89.08 E-value=0.58 Score=37.73 Aligned_cols=36 Identities=25% Similarity=0.223 Sum_probs=27.8
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
-||...+.++.++.++.|-|||+||.+|..+..++.
T Consensus 263 ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg 298 (425)
T KOG4540|consen 263 LDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG 298 (425)
T ss_pred HHHHHHHHHhCCCceEEEeccccchHHHHHhccccC
Confidence 344445556666668999999999999999988873
No 242
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=88.03 E-value=19 Score=32.04 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=58.4
Q ss_pred Cce-EEEecCCCCCCCChHHH--HHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhC
Q 020518 44 TST-AFVLHGLLGSGRNWRSF--SRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKG 120 (325)
Q Consensus 44 ~~~-vv~~HG~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~ 120 (325)
+|| .|.+-|+-. ++.|+.+ +..|.. =-.+.-|.|=-|.+--... ..+ -+.+.+-|.+.|++|+
T Consensus 288 KPPL~VYFSGyR~-aEGFEgy~MMk~Lg~----------PfLL~~DpRleGGaFYlGs--~ey-E~~I~~~I~~~L~~Lg 353 (511)
T TIGR03712 288 KPPLNVYFSGYRP-AEGFEGYFMMKRLGA----------PFLLIGDPRLEGGAFYLGS--DEY-EQGIINVIQEKLDYLG 353 (511)
T ss_pred CCCeEEeeccCcc-cCcchhHHHHHhcCC----------CeEEeeccccccceeeeCc--HHH-HHHHHHHHHHHHHHhC
Confidence 444 588888855 6666653 333332 1344558887776644321 122 4456677788889998
Q ss_pred CCC-CEEEEEeChhHHHHHHHHHHc
Q 020518 121 WDW-PDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 121 ~~~-~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.+. ..+|-|-|||..-|+.|+++.
T Consensus 354 F~~~qLILSGlSMGTfgAlYYga~l 378 (511)
T TIGR03712 354 FDHDQLILSGLSMGTFGALYYGAKL 378 (511)
T ss_pred CCHHHeeeccccccchhhhhhcccC
Confidence 752 699999999999999999875
No 243
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=87.29 E-value=3.1 Score=36.70 Aligned_cols=67 Identities=13% Similarity=0.081 Sum_probs=48.7
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CC------CCC-ceeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DG------SEG-KVSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~------~~~-~~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
+++||+..|..|-+++....+.+.+.+.-.. +. ... +.+++.+-+|||+++ .+|++..+.+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4789999999998888866665544432100 00 002 278889999999996 58999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99864
No 244
>PLN02209 serine carboxypeptidase
Probab=87.04 E-value=2.9 Score=36.96 Aligned_cols=67 Identities=12% Similarity=0.046 Sum_probs=48.9
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcC----------CC------CCCc-eeEEEecCCCccccccChHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQG----------DG------SEGK-VSVHVLPNAGHWVHVDNPKGLLEIVA 319 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~----------~~------~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~ 319 (325)
.+++++..|..|-+++....+.+...++-.. +. ...+ .+++.+-+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4789999999998888766655544443100 00 0123 78889999999996 69999999999
Q ss_pred HHHhc
Q 020518 320 PRIAS 324 (325)
Q Consensus 320 ~fl~~ 324 (325)
+|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99863
No 245
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=86.62 E-value=1.3 Score=39.65 Aligned_cols=107 Identities=20% Similarity=0.190 Sum_probs=60.0
Q ss_pred CCCceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--
Q 020518 42 PYTSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLV-- 116 (325)
Q Consensus 42 ~~~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l-- 116 (325)
+++..|+-+||.|. ++..-+...+..+.. -+..|+.+|+-=--... .+..+++..-...=+|
T Consensus 394 ~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~a-------L~cPiiSVdYSLAPEaP------FPRaleEv~fAYcW~inn 460 (880)
T KOG4388|consen 394 RSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQA-------LGCPIISVDYSLAPEAP------FPRALEEVFFAYCWAINN 460 (880)
T ss_pred CCceEEEEecCCceeeeccccccHHHHHHHHH-------hCCCeEEeeeccCCCCC------CCcHHHHHHHHHHHHhcC
Confidence 35667889999876 333334444444543 46799999974222221 2233444332222222
Q ss_pred -HHhCCC-CCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 117 -KAKGWD-WPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 117 -~~~~~~-~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+|.. .+++++|-|.||.+.+-.|.+.-+ ++ ....+++++.-++
T Consensus 461 ~allG~TgEriv~aGDSAGgNL~~~VaLr~i~--~g--vRvPDGl~laY~p 507 (880)
T KOG4388|consen 461 CALLGSTGERIVLAGDSAGGNLCFTVALRAIA--YG--VRVPDGLMLAYPP 507 (880)
T ss_pred HHHhCcccceEEEeccCCCcceeehhHHHHHH--hC--CCCCCceEEecCh
Confidence 344542 289999999999987777766433 11 1134677765543
No 246
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=84.30 E-value=6.2 Score=27.96 Aligned_cols=28 Identities=29% Similarity=0.590 Sum_probs=21.0
Q ss_pred CCCCceEEEecCCCCCCCChHH--HHHHHH
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRS--FSRNLA 68 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~--~~~~l~ 68 (325)
.+++|.|+-+||+.|+.-+|-. +++.|-
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly 78 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLY 78 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHH
Confidence 3578999999999999987743 455544
No 247
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=81.26 E-value=1.2 Score=37.59 Aligned_cols=30 Identities=50% Similarity=0.698 Sum_probs=24.5
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.++++..|+. +..++|||+|=..|+.++.
T Consensus 74 l~~~l~~~Gi~-P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIK-PDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHC-ESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccc-cceeeccchhhHHHHHHCC
Confidence 45666788888 9999999999888886654
No 248
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=80.44 E-value=2.3 Score=35.34 Aligned_cols=30 Identities=43% Similarity=0.588 Sum_probs=24.6
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.+++...|+. +..++|||+|-..|+.++.
T Consensus 72 ~~~~l~~~Gi~-p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 72 LARLWRSWGVR-PDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHHcCCc-ccEEEecCHHHHHHHHHhC
Confidence 44556788998 9999999999998887764
No 249
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=79.78 E-value=7 Score=34.70 Aligned_cols=45 Identities=18% Similarity=0.307 Sum_probs=31.9
Q ss_pred CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
|.. |+.|||+|+|+-+.+.....-.+ ..+...|..+++++++...
T Consensus 445 G~R-PVTLVGFSLGARvIf~CL~~Lak---kke~~iIEnViL~GaPv~~ 489 (633)
T KOG2385|consen 445 GNR-PVTLVGFSLGARVIFECLLELAK---KKEVGIIENVILFGAPVPT 489 (633)
T ss_pred CCC-ceeEeeeccchHHHHHHHHHHhh---cccccceeeeeeccCCccC
Confidence 555 99999999999998876654322 1122378999999876433
No 250
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=78.74 E-value=2.9 Score=34.73 Aligned_cols=30 Identities=27% Similarity=0.092 Sum_probs=24.4
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.+++.+.++. +..++|||+|-..|+.++.
T Consensus 66 l~~~l~~~g~~-P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 66 AWRALLALLPR-PSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHHhcCCC-CcEEeecCHHHHHHHHHhC
Confidence 45556777887 9999999999988887764
No 251
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=78.39 E-value=18 Score=24.48 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=48.8
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChh--HHHHHHHHHHccccccCCccCC
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMG--GKVALHFAQSCARADYGQFVAL 155 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G--g~~a~~~a~~~p~~~~~~~~~~ 155 (325)
.|+..=.+.++.+|.+....- .....+.=...+..+++..-.. ++++||-|-- --+-..+|.++|+ +
T Consensus 23 ~~~P~G~~~Lr~~~~~~~~~~--~~~~~~~K~~~i~~i~~~fP~~-kfiLIGDsgq~DpeiY~~ia~~~P~--------~ 91 (100)
T PF09949_consen 23 NGFPAGPLLLRDYGPSLSGLF--KSGAEEHKRDNIERILRDFPER-KFILIGDSGQHDPEIYAEIARRFPG--------R 91 (100)
T ss_pred cCCCCCceEcccCCccccccc--cCCchhHHHHHHHHHHHHCCCC-cEEEEeeCCCcCHHHHHHHHHHCCC--------C
Confidence 567777777887765543221 1111134556677888877766 9999999864 4455668889999 8
Q ss_pred cceEEE
Q 020518 156 PKQLWV 161 (325)
Q Consensus 156 v~~lvl 161 (325)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 888754
No 252
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=78.25 E-value=3.3 Score=34.65 Aligned_cols=32 Identities=22% Similarity=0.347 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+...+++.++. .-.++|-|+|+.++..||..+
T Consensus 33 vL~aLee~gi~-~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIP-VDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCC
Confidence 45556666888 889999999999999999864
No 253
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=77.40 E-value=4 Score=30.79 Aligned_cols=34 Identities=26% Similarity=0.314 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.+.+++.++. .-.++|-|+|+.++..++...+.
T Consensus 16 vl~aL~e~gi~-~d~v~GtSaGAi~aa~~a~g~~~ 49 (172)
T cd07198 16 VAKALRERGPL-IDIIAGTSAGAIVAALLASGRDL 49 (172)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCCH
Confidence 34445555777 88999999999999999986543
No 254
>PRK10279 hypothetical protein; Provisional
Probab=77.09 E-value=3.7 Score=34.18 Aligned_cols=33 Identities=30% Similarity=0.413 Sum_probs=26.7
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+.+.+++.++. .-.++|-|+|+.++..||....
T Consensus 23 VL~aL~E~gi~-~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIE-IDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCC-cCEEEEEcHHHHHHHHHHcCCh
Confidence 34555667888 8899999999999999997643
No 255
>COG3933 Transcriptional antiterminator [Transcription]
Probab=76.55 E-value=17 Score=31.87 Aligned_cols=76 Identities=12% Similarity=0.204 Sum_probs=58.2
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDW 123 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 123 (325)
-..||..||.... .+...++..|-. .--+.++|+| -..+..++.+.+.+.+++.+..
T Consensus 109 v~vIiiAHG~sTA-SSmaevanrLL~---------~~~~~aiDMP------------Ldvsp~~vle~l~e~~k~~~~~- 165 (470)
T COG3933 109 VKVIIIAHGYSTA-SSMAEVANRLLG---------EEIFIAIDMP------------LDVSPSDVLEKLKEYLKERDYR- 165 (470)
T ss_pred eeEEEEecCcchH-HHHHHHHHHHhh---------ccceeeecCC------------CcCCHHHHHHHHHHHHHhcCcc-
Confidence 4578999999654 445556666653 3368899998 6889999999999999999877
Q ss_pred CEEEEEeChhHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~ 142 (325)
+=.++=-+||......=..
T Consensus 166 ~GlllLVDMGSL~~f~~~i 184 (470)
T COG3933 166 SGLLLLVDMGSLTSFGSII 184 (470)
T ss_pred CceEEEEecchHHHHHHHH
Confidence 6677778999987765443
No 256
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=75.72 E-value=4.5 Score=31.16 Aligned_cols=32 Identities=22% Similarity=0.192 Sum_probs=25.0
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+.+++.++. .-.++|-|.||.+|..++..++
T Consensus 18 l~~L~e~~~~-~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 18 LKALEEAGIL-KKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHcCCC-cceEEEECHHHHHHHHHHcCCC
Confidence 3344556777 7899999999999999998643
No 257
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=75.54 E-value=3.8 Score=33.92 Aligned_cols=31 Identities=39% Similarity=0.498 Sum_probs=23.9
Q ss_pred HHHHHHHhC-CCCCEEEEEeChhHHHHHHHHHH
Q 020518 112 LANLVKAKG-WDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 112 l~~~l~~~~-~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+...+.+.+ +. +..++|||+|=+.|+.++..
T Consensus 72 l~~~l~~~g~i~-p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 72 LYLKLKEQGGLK-PDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHHHcCCCC-CCEEeecCHHHHHHHHHhCC
Confidence 344555666 88 99999999999988877743
No 258
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=75.20 E-value=9.6 Score=34.20 Aligned_cols=66 Identities=14% Similarity=0.203 Sum_probs=44.6
Q ss_pred cEEEEeeCCCCCCChHHH-HHHHHHhhhcCCC---CCCceeEEEecCCCcccccc--ChHHHHHHHHHHHhc
Q 020518 259 EIAIVRAEKSDRWDPDVI-QRLEGLANRQGDG---SEGKVSVHVLPNAGHWVHVD--NPKGLLEIVAPRIAS 324 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~~~~gH~~~~e--~p~~~~~~i~~fl~~ 324 (325)
.+++.+|-.|..+++... ....+....++.. ...-.++..+||.+|+.--. .+-.....|.+|+++
T Consensus 355 KLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 355 KLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred eEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 578999999999998543 3333344443321 22347899999999987654 445677778888763
No 259
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=74.27 E-value=5.1 Score=32.78 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=26.3
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+.+.+++.++. .-.+.|-|+|+.++..||...
T Consensus 28 VL~aLeE~gi~-~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIP-IDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCC-ccEEEEECHHHHHHHHHHcCC
Confidence 44555677888 889999999999999999863
No 260
>PF03610 EIIA-man: PTS system fructose IIA component; InterPro: IPR004701 The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) [, ] is a major carbohydrate transport system in bacteria. The PTS catalyses the phosphorylation of incoming sugar substrates and coupled with translocation across the cell membrane, makes the PTS a link between the uptake and metabolism of sugars. The general mechanism of the PTS is the following: a phosphoryl group from phosphoenolpyruvate (PEP) is transferred via a signal transduction pathway, to enzyme I (EI) which in turn transfers it to a phosphoryl carrier, the histidine protein (HPr). Phospho-HPr then transfers the phosphoryl group to a sugar-specific permease, a membrane-bound complex known as enzyme 2 (EII), which transports the sugar to the cell. EII consists of at least three structurally distinct domains IIA, IIB and IIC []. These can either be fused together in a single polypeptide chain or exist as two or three interactive chains, formerly called enzymes II (EII) and III (EIII). The first domain (IIA or EIIA) carries the first permease-specific phosphorylation site, a histidine which is phosphorylated by phospho-HPr. The second domain (IIB or EIIB) is phosphorylated by phospho-IIA on a cysteinyl or histidyl residue, depending on the sugar transported. Finally, the phosphoryl group is transferred from the IIB domain to the sugar substrate concomitantly with the sugar uptake processed by the IIC domain. This third domain (IIC or EIIC) forms the translocation channel and the specific substrate-binding site. An additional transmembrane domain IID, homologous to IIC, can be found in some PTSs, e.g. for mannose [, , , ]. The Man family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of Escherichia coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine, N-acetylglucosamine, and other sugars. Other members of this can transport sorbose, fructose and N-acetylglucosamine. This family is specific for IIA and IIB components.; GO: 0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system, 0016021 integral to membrane; PDB: 3GDW_B 2JZN_A 1VSQ_A 2JZO_B 1VRC_A 1PDO_A 3GX1_A 3B48_B 3BED_B 3IPR_C ....
Probab=73.49 E-value=21 Score=24.75 Aligned_cols=76 Identities=17% Similarity=0.202 Sum_probs=47.3
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCC-ceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASS-EWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWP 124 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 124 (325)
.||.-|| .-+......+..+.. . .-.+.++++. ...+.+++.+.+.+.+++.... .
T Consensus 2 iii~sHG--~~A~g~~~~~~~i~G--------~~~~~i~~~~~~------------~~~~~~~~~~~l~~~i~~~~~~-~ 58 (116)
T PF03610_consen 2 IIIASHG--SLAEGLLESAEMILG--------EDQDNIEAVDLY------------PDESIEDFEEKLEEAIEELDEG-D 58 (116)
T ss_dssp EEEEEET--THHHHHHHHHHHHHT--------STCSSEEEEEET------------TTSCHHHHHHHHHHHHHHCCTT-S
T ss_pred EEEEECc--HHHHHHHHHHHHHcC--------CCcccEEEEECc------------CCCCHHHHHHHHHHHHHhccCC-C
Confidence 4778888 333444445555553 3 2356666654 5678999999999999988755 4
Q ss_pred EEEEEeChhHHHHHHHHHHc
Q 020518 125 DVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~ 144 (325)
-+++=-+++|......+.+.
T Consensus 59 ~vlil~Dl~ggsp~n~a~~~ 78 (116)
T PF03610_consen 59 GVLILTDLGGGSPFNEAARL 78 (116)
T ss_dssp EEEEEESSTTSHHHHHHHHH
T ss_pred cEEEEeeCCCCccchHHHHH
Confidence 45555555555555555443
No 261
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=73.30 E-value=5.7 Score=35.17 Aligned_cols=64 Identities=16% Similarity=-0.005 Sum_probs=38.3
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
++++...|-.|..+++-......+..+...... +...+.+++ +||++..++|+...+.+..|+.
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~-n~~~~r~y~-aGHMvp~d~P~~~~~~~~~~~~ 489 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYR-NLTFLRIYE-AGHMVPYDRPESSLEMVNLWIN 489 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccC-CceEEEEec-CcceeecCChHHHHHHHHHHHh
Confidence 455666666666655533322222222221111 224555566 6999999999999999988874
No 262
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=72.85 E-value=6.5 Score=31.15 Aligned_cols=30 Identities=27% Similarity=0.381 Sum_probs=23.9
Q ss_pred HHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 114 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+.+++.+++ .-.++|-|.|+.++..+|...
T Consensus 20 ~aL~e~gi~-~~~i~GtSaGAi~aa~~a~g~ 49 (221)
T cd07210 20 AALLEMGLE-PSAISGTSAGALVGGLFASGI 49 (221)
T ss_pred HHHHHcCCC-ceEEEEeCHHHHHHHHHHcCC
Confidence 334445777 778999999999999999754
No 263
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=72.53 E-value=48 Score=27.35 Aligned_cols=41 Identities=24% Similarity=0.105 Sum_probs=27.8
Q ss_pred CHHHHHHH-HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 104 DIANAAND-LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 104 ~~~~~~~~-l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.+++-+.+ ...+++......++.++|.|-|+.+|-.+|..-
T Consensus 72 g~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 72 GIEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred chHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 34444444 333445554443899999999999999999753
No 264
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=70.47 E-value=6.5 Score=32.96 Aligned_cols=33 Identities=27% Similarity=0.372 Sum_probs=27.7
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+.+.|++.++. +-++.|-|+|+.++..+|....
T Consensus 29 Vl~aL~e~gi~-~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 29 VLKALEEAGIP-IDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHcCCC-ccEEEecCHHHHHHHHHHcCCC
Confidence 45667777888 8999999999999999998543
No 265
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=69.32 E-value=6.2 Score=35.81 Aligned_cols=32 Identities=22% Similarity=0.243 Sum_probs=25.7
Q ss_pred HHHHH-HHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 112 LANLV-KAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 112 l~~~l-~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+.+++ +..|+. |-.++|||+|=..|+..|.-.
T Consensus 254 La~ll~~~~GI~-Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIK-PDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCC-CCEEeecCHHHHHHHHHhCCC
Confidence 34555 578899 999999999999998888644
No 266
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=68.38 E-value=8.2 Score=30.39 Aligned_cols=32 Identities=22% Similarity=0.363 Sum_probs=25.3
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+.+.+.++. .-.++|.|.|+.+|..+++..+
T Consensus 17 l~aL~e~g~~-~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 17 LKALAEAGIE-PDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCc
Confidence 3444555776 7799999999999999998754
No 267
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=68.21 E-value=9.3 Score=28.89 Aligned_cols=32 Identities=22% Similarity=0.419 Sum_probs=24.9
Q ss_pred HHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 114 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.+++.++. .-.++|-|.|+.++..++...+.
T Consensus 20 ~~L~e~g~~-~d~i~GtSaGAi~aa~~a~g~~~ 51 (175)
T cd07228 20 RALEEEGIE-IDIIAGSSIGALVGALYAAGHLD 51 (175)
T ss_pred HHHHHCCCC-eeEEEEeCHHHHHHHHHHcCCCH
Confidence 334455777 78999999999999999987543
No 268
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=63.34 E-value=13 Score=27.98 Aligned_cols=30 Identities=27% Similarity=0.378 Sum_probs=23.5
Q ss_pred HHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 114 NLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 114 ~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
+.+++.++. .-.++|-|.|+.+|..++...
T Consensus 20 ~~L~~~~~~-~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 20 KALEEAGIP-IDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHcCCC-eeEEEEECHHHHHHHHHHcCC
Confidence 334455666 778999999999999999654
No 269
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=59.91 E-value=12 Score=33.05 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=26.1
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.+.+.+.++. +-++.|-|.|+.+|..++...++
T Consensus 91 VLkaL~E~gl~-p~vIsGTSaGAivAal~as~~~e 124 (421)
T cd07230 91 VLKALFEANLL-PRIISGSSAGSIVAAILCTHTDE 124 (421)
T ss_pred HHHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCHH
Confidence 33444445677 77899999999999999987665
No 270
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=59.32 E-value=22 Score=27.69 Aligned_cols=54 Identities=26% Similarity=0.282 Sum_probs=42.6
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCh----hHHHHHHHHHHccc
Q 020518 81 RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSM----GGKVALHFAQSCAR 146 (325)
Q Consensus 81 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~----Gg~~a~~~a~~~p~ 146 (325)
+|+..|.++. ..|+.+.+++.+.+++++.+ . .++++|+|. |..++-.+|.+..-
T Consensus 79 ~V~~~~~~~~----------~~~~~e~~a~al~~~i~~~~-p-~lVL~~~t~~~~~grdlaprlAarLga 136 (202)
T cd01714 79 RAILVSDRAF----------AGADTLATAKALAAAIKKIG-V-DLILTGKQSIDGDTGQVGPLLAELLGW 136 (202)
T ss_pred EEEEEecccc----------cCCChHHHHHHHHHHHHHhC-C-CEEEEcCCcccCCcCcHHHHHHHHhCC
Confidence 6666665422 35778999999999999887 5 799999998 88999999988543
No 271
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=59.07 E-value=5.9 Score=29.39 Aligned_cols=50 Identities=20% Similarity=0.146 Sum_probs=29.1
Q ss_pred eCCCCCCCCCCCCCCCCCCCHHHHHHHH----HHHHHHh----CCCCCEEEEEeChhHH
Q 020518 85 VDLRNHGRSAEIEGLDPPHDIANAANDL----ANLVKAK----GWDWPDVVIGHSMGGK 135 (325)
Q Consensus 85 ~D~~G~G~S~~~~~~~~~~~~~~~~~~l----~~~l~~~----~~~~~~~lvGhS~Gg~ 135 (325)
+-+-|||........-..++.++++.-| ..+-+.. .++ ++.|+|.|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~-~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPK-KISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ES-EEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCC-EEEEEEecccCC
Confidence 3445888872222111567889999888 4555444 245 799999999877
No 272
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=57.22 E-value=1.4e+02 Score=26.28 Aligned_cols=101 Identities=18% Similarity=0.128 Sum_probs=61.6
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--------------------CCCCH
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--------------------PPHDI 105 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~--------------------~~~~~ 105 (325)
+|+++--+-.-...+..+...+.+ .|..++.+|.-=.|.+..+.+.. ....+
T Consensus 3 tI~iigT~DTK~~E~~yl~~~i~~--------~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai 74 (403)
T PF06792_consen 3 TIAIIGTLDTKGEELLYLRDQIEA--------QGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAI 74 (403)
T ss_pred EEEEEEccCCCHHHHHHHHHHHHH--------CCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHH
Confidence 444443333333445556666666 89999999975444443332110 01123
Q ss_pred HHHHHHHHHHHHHhC----CCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 106 ANAANDLANLVKAKG----WDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 106 ~~~~~~l~~~l~~~~----~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
+.+++-...++..+. ++ -++-+|-|.|..++.......|= -+-++++..
T Consensus 75 ~~M~~ga~~~v~~l~~~g~i~-Gvi~~GGs~GT~lat~aMr~LPi--------G~PKlmVST 127 (403)
T PF06792_consen 75 EAMARGAARFVSDLYDEGKID-GVIGIGGSGGTALATAAMRALPI--------GFPKLMVST 127 (403)
T ss_pred HHHHHHHHHHHHHHHhcCCcc-EEEEecCCccHHHHHHHHHhCCC--------CCCeEEEEc
Confidence 444555566665553 45 68899999999999999998886 566665543
No 273
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=57.11 E-value=15 Score=31.93 Aligned_cols=33 Identities=15% Similarity=0.274 Sum_probs=25.7
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
...+.+.++. +-++.|-|.|+.+|..+|..-++
T Consensus 102 ~kaL~e~gl~-p~~i~GtS~Gaivaa~~a~~~~~ 134 (391)
T cd07229 102 VKALWLRGLL-PRIITGTATGALIAALVGVHTDE 134 (391)
T ss_pred HHHHHHcCCC-CceEEEecHHHHHHHHHHcCCHH
Confidence 4444555777 77899999999999999996554
No 274
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=56.05 E-value=49 Score=25.98 Aligned_cols=36 Identities=11% Similarity=0.061 Sum_probs=24.5
Q ss_pred CceEEEecCCCCCCCC--hH-HHHHHHHhhhhccCCCCceEEEEeCC
Q 020518 44 TSTAFVLHGLLGSGRN--WR-SFSRNLASTLSQTSASSEWRMVLVDL 87 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~--~~-~~~~~l~~~~~~~~~~~~~~vi~~D~ 87 (325)
++.|.||+-.+.+... |. .....|.+ .|..+..+++
T Consensus 32 ~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~--------lg~~v~~L~l 70 (224)
T COG3340 32 RKTIAFIPTASVDSEDDFYVEKVRNALAK--------LGLEVSELHL 70 (224)
T ss_pred CceEEEEecCccccchHHHHHHHHHHHHH--------cCCeeeeeec
Confidence 6789999988887655 32 34444554 6777777765
No 275
>TIGR01626 ytfJ_HI0045 conserved hypothetical protein YtfJ-family, TIGR01626. This model represents sequences from gamma proteobacteria that are related to the E. coli protein, YtfJ.
Probab=56.03 E-value=90 Score=23.96 Aligned_cols=94 Identities=11% Similarity=0.040 Sum_probs=58.9
Q ss_pred cccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEE------EEeCCCCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRM------VLVDLRNHGRSAEIEGL 99 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v------i~~D~~G~G~S~~~~~~ 99 (325)
++..+.|..+....-...-..|-++-||+...+.-.+++..|.+ +|+.+ +.++.
T Consensus 43 ~~~~~~y~~~~~~~l~GKV~lvn~~Aswc~~c~~e~P~l~~l~~--------~~~~~~~y~~t~~IN~------------ 102 (184)
T TIGR01626 43 SGKDTVYQPWGSAELAGKVRVVHHIAGRTSAKEXNASLIDAIKA--------AKFPPVKYQTTTIINA------------ 102 (184)
T ss_pred cCCcccceeccHHHcCCCEEEEEEEecCCChhhccchHHHHHHH--------cCCCcccccceEEEEC------------
Confidence 55678888876643321112344666788888888899999987 77777 77752
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 100 DPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 100 ~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
..+.......+..+++..+.+-++..+..+-.|.++..+.
T Consensus 103 --dd~~~~~~~fVk~fie~~~~~~P~~~vllD~~g~v~~~~g 142 (184)
T TIGR01626 103 --DDAIVGTGMFVKSSAKKGKKENPWSQVVLDDKGAVKNAWQ 142 (184)
T ss_pred --ccchhhHHHHHHHHHHHhcccCCcceEEECCcchHHHhcC
Confidence 2234455566778888776553444444444555555444
No 276
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=55.77 E-value=41 Score=28.18 Aligned_cols=52 Identities=23% Similarity=0.203 Sum_probs=30.7
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC---CCEEEEEeChhHHHHHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD---WPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~---~~~~lvGhS~Gg~~a~~~a~ 142 (325)
++++|+++|== |- .---.+.-|.++.+..+.. .--.++|-|.||.+|+.++.
T Consensus 6 ~~~riLsLdGG--Gi-----------rG~~~~~vL~~Le~~~~~~i~~~fDli~GTStGgiiA~~la~ 60 (308)
T cd07211 6 RGIRILSIDGG--GT-----------RGVVALEILRKIEKLTGKPIHELFDYICGVSTGAILAFLLGL 60 (308)
T ss_pred CCcEEEEECCC--hH-----------HHHHHHHHHHHHHHHhCCCchhhcCEEEecChhHHHHHHHhc
Confidence 78899999831 10 0111233344444444321 01368899999999999986
No 277
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=55.61 E-value=40 Score=24.83 Aligned_cols=51 Identities=25% Similarity=0.253 Sum_probs=35.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+|-.|+++|.+| ...+-+++++.+..+-+. |-+ -.++||-|.|=.-++...
T Consensus 66 ~~~~vi~Ld~~G-----------k~~sSe~fA~~l~~~~~~-G~~-i~f~IGG~~Gl~~~~~~~ 116 (155)
T COG1576 66 KGSYVVLLDIRG-----------KALSSEEFADFLERLRDD-GRD-ISFLIGGADGLSEAVKAR 116 (155)
T ss_pred CCCeEEEEecCC-----------CcCChHHHHHHHHHHHhc-CCe-EEEEEeCcccCCHHHHHH
Confidence 677999999985 455666777777666554 333 567889999865555443
No 278
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=54.31 E-value=16 Score=31.98 Aligned_cols=33 Identities=21% Similarity=0.235 Sum_probs=25.4
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
...+.+.++. +-+++|-|.|+.+|..++...++
T Consensus 86 lkaL~e~gll-p~iI~GtSAGAivaalla~~t~~ 118 (407)
T cd07232 86 VKALLDADLL-PNVISGTSGGSLVAALLCTRTDE 118 (407)
T ss_pred HHHHHhCCCC-CCEEEEECHHHHHHHHHHcCCHH
Confidence 3334444677 77899999999999999986655
No 279
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=53.05 E-value=19 Score=30.16 Aligned_cols=32 Identities=22% Similarity=0.263 Sum_probs=24.2
Q ss_pred HHHHHHhCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 113 ANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 113 ~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+.+.+.++. +-++.|-|.|+.+|..++...+
T Consensus 87 lkaL~e~gl~-p~~i~GsSaGAivaa~~~~~t~ 118 (323)
T cd07231 87 VRTLVEHQLL-PRVIAGSSVGSIVCAIIATRTD 118 (323)
T ss_pred HHHHHHcCCC-CCEEEEECHHHHHHHHHHcCCH
Confidence 3334444777 7789999999999999987543
No 280
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=51.77 E-value=35 Score=26.57 Aligned_cols=61 Identities=10% Similarity=0.113 Sum_probs=35.3
Q ss_pred CCceEEEecCCCCCCCChH---HHHHHHHhhhhccCCCCceEEEEeCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWR---SFSRNLASTLSQTSASSEWRMVLVDLR--NHGRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~---~~~~~l~~~~~~~~~~~~~~vi~~D~~--G~G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
.++|++++||-.+..-... .+...|.+ .|..+...-++ |||.... ....+..+.+.++++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~--------~g~~~~~~~~p~~gH~~~~~-------~~~~~~~~~~~~f~~ 207 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRK--------AGKPVELLIFPGEGHGFGNP-------ENRRDWYERILDFFD 207 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHH--------TTSSEEEEEETT-SSSTTSH-------HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHh--------cCCCEEEEEcCcCCCCCCCc-------hhHHHHHHHHHHHHH
Confidence 4789999999877554333 35566665 45444444444 4543322 223356666666665
Q ss_pred H
Q 020518 118 A 118 (325)
Q Consensus 118 ~ 118 (325)
+
T Consensus 208 ~ 208 (213)
T PF00326_consen 208 K 208 (213)
T ss_dssp H
T ss_pred H
Confidence 4
No 281
>COG0218 Predicted GTPase [General function prediction only]
Probab=50.51 E-value=17 Score=28.08 Aligned_cols=62 Identities=8% Similarity=0.032 Sum_probs=30.3
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCccccccChHHHHHHHHHHHh
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVDNPKGLLEIVAPRIA 323 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 323 (325)
+|++++.-.-|.+-..+..+.+......+....+....++.++-..... -+++.+.|.+++.
T Consensus 136 i~~~vv~tK~DKi~~~~~~k~l~~v~~~l~~~~~~~~~~~~~ss~~k~G----i~~l~~~i~~~~~ 197 (200)
T COG0218 136 IPVIVVLTKADKLKKSERNKQLNKVAEELKKPPPDDQWVVLFSSLKKKG----IDELKAKILEWLK 197 (200)
T ss_pred CCeEEEEEccccCChhHHHHHHHHHHHHhcCCCCccceEEEEecccccC----HHHHHHHHHHHhh
Confidence 6888888888877655443333333322211100111144444433322 3666666666654
No 282
>PRK02399 hypothetical protein; Provisional
Probab=49.92 E-value=1.8e+02 Score=25.55 Aligned_cols=101 Identities=16% Similarity=0.144 Sum_probs=59.6
Q ss_pred ceEEEecCCCCCC-CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC--------------------CCC
Q 020518 45 STAFVLHGLLGSG-RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD--------------------PPH 103 (325)
Q Consensus 45 ~~vv~~HG~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~--------------------~~~ 103 (325)
+.|+++ |-..+. ..+..+...+.+ .|..|+.+|.-..|....+.+.. ...
T Consensus 4 ~~I~ii-gT~DTK~~E~~yl~~~i~~--------~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ 74 (406)
T PRK02399 4 KRIYIA-GTLDTKGEELAYVKDLIEA--------AGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGS 74 (406)
T ss_pred CEEEEE-eccCCcHHHHHHHHHHHHH--------CCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHH
Confidence 344444 444444 344444555554 68999999984444222211100 111
Q ss_pred CHHHHHHHHHHHHHHh----CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 104 DIANAANDLANLVKAK----GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~----~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
.++.+++-...++..+ .++ -++-+|-|.|..++.......|= -+-++++..
T Consensus 75 ai~~M~~ga~~~v~~L~~~g~i~-gviglGGs~GT~lat~aMr~LPi--------G~PKlmVST 129 (406)
T PRK02399 75 AMAAMAEGAAAFVRELYERGDVA-GVIGLGGSGGTALATPAMRALPI--------GVPKLMVST 129 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc-EEEEecCcchHHHHHHHHHhCCC--------CCCeEEEEc
Confidence 2244455555565543 355 68999999999999999998887 566665543
No 283
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=48.30 E-value=29 Score=30.27 Aligned_cols=54 Identities=11% Similarity=0.079 Sum_probs=34.2
Q ss_pred cEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccccc-----ChHHHHHHHHHHH
Q 020518 259 EIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVHVD-----NPKGLLEIVAPRI 322 (325)
Q Consensus 259 P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e-----~p~~~~~~i~~fl 322 (325)
.+++|+|+.|+...... .+..+.. ++.+.+.||++|...+. ..++..+.|.+|-
T Consensus 353 rmlFVYG~nDPW~A~~f-----~l~~g~~-----ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~Wa 411 (448)
T PF05576_consen 353 RMLFVYGENDPWSAEPF-----RLGKGKR-----DSYVFTAPGGNHGARIAGLPEAERAEATARLRRWA 411 (448)
T ss_pred eEEEEeCCCCCcccCcc-----ccCCCCc-----ceEEEEcCCCcccccccCCCHHHHHHHHHHHHHHc
Confidence 57999999997654321 1222111 37888899999987764 2345555666653
No 284
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=48.05 E-value=1.4e+02 Score=23.96 Aligned_cols=91 Identities=15% Similarity=0.150 Sum_probs=45.0
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-------CCCCHHHHHH--HHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-------PPHDIANAAN--DLAN 114 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-------~~~~~~~~~~--~l~~ 114 (325)
++.|+||+=.... ..+....+...+.+.+ -|+.+..++...-- .......+ ....+-.... .+..
T Consensus 31 ~~~v~fIPtAs~~-~~~~~y~~~~~~af~~----lG~~v~~l~~~~d~-~~~l~~ad~I~v~GGnt~~l~~~l~~~gl~~ 104 (233)
T PRK05282 31 RRKAVFIPYAGVT-QSWDDYTAKVAEALAP----LGIEVTGIHRVADP-VAAIENAEAIFVGGGNTFQLLKQLYERGLLA 104 (233)
T ss_pred CCeEEEECCCCCC-CCHHHHHHHHHHHHHH----CCCEEEEeccchhh-HHHHhcCCEEEECCccHHHHHHHHHHCCcHH
Confidence 6789999987644 3444433333333322 68888888765210 00000000 1111111111 1333
Q ss_pred HHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 115 LVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 115 ~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
.|++.-.+ ...++|.|.|++++....
T Consensus 105 ~l~~~~~~-G~~~~G~SAGAii~~~~i 130 (233)
T PRK05282 105 PIREAVKN-GTPYIGWSAGANVAGPTI 130 (233)
T ss_pred HHHHHHHC-CCEEEEECHHHHhhhccc
Confidence 34333223 577999999999865544
No 285
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=46.65 E-value=31 Score=28.76 Aligned_cols=33 Identities=24% Similarity=0.294 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
+.++. +.++. +-++.|-|.|+.+|..++....+
T Consensus 88 l~aL~-e~~l~-~~~i~GtSaGAi~aa~~~~~~~~ 120 (298)
T cd07206 88 VKALW-EQDLL-PRVISGSSAGAIVAALLGTHTDE 120 (298)
T ss_pred HHHHH-HcCCC-CCEEEEEcHHHHHHHHHHcCCcH
Confidence 34443 44666 67899999999999999976433
No 286
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=46.35 E-value=34 Score=27.34 Aligned_cols=32 Identities=22% Similarity=0.128 Sum_probs=22.7
Q ss_pred HHHHHhCCCC-CEEEEEeChhHHHHHHHHHHcc
Q 020518 114 NLVKAKGWDW-PDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 114 ~~l~~~~~~~-~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+.+.+.++.. ...++|-|.|+.++..++...+
T Consensus 19 ~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 19 SLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3344445541 3479999999999999998643
No 287
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=46.25 E-value=73 Score=29.91 Aligned_cols=44 Identities=14% Similarity=0.169 Sum_probs=27.6
Q ss_pred CCCceEEEecCCCCCCC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCC
Q 020518 42 PYTSTAFVLHGLLGSGR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRS 93 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S 93 (325)
.-+.|+++|||.....- .-..+...|.. .|..|-.+-+|+-|.+
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~--------~g~~~~~~~~p~e~H~ 595 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKR--------KGKPVELVVFPDEGHG 595 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHH--------cCceEEEEEeCCCCcC
Confidence 34678999999977443 23446666665 5666655555554444
No 288
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.12 E-value=17 Score=30.64 Aligned_cols=20 Identities=35% Similarity=0.507 Sum_probs=17.1
Q ss_pred EEEEEeChhHHHHHHHHHHc
Q 020518 125 DVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~ 144 (325)
-.+.|-|+||.+|+.++..+
T Consensus 34 D~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 34 DWIAGTSTGGILALALLHGK 53 (312)
T ss_pred cEEEeeChHHHHHHHHHcCC
Confidence 36889999999999999743
No 289
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=45.92 E-value=1.9e+02 Score=24.66 Aligned_cols=108 Identities=18% Similarity=0.226 Sum_probs=67.7
Q ss_pred CCceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHh
Q 020518 43 YTSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDI-ANAANDLANLVKAK 119 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~-~~~~~~l~~~l~~~ 119 (325)
++|.|+++=|..+..- .-..++..|.+ .|++|+.-- ..|+ ..-++.+..+-+.+
T Consensus 137 ~~p~Vil~vGVNG~GKTTTIaKLA~~l~~--------~g~~VllaA---------------~DTFRAaAiEQL~~w~er~ 193 (340)
T COG0552 137 KKPFVILFVGVNGVGKTTTIAKLAKYLKQ--------QGKSVLLAA---------------GDTFRAAAIEQLEVWGERL 193 (340)
T ss_pred CCcEEEEEEecCCCchHhHHHHHHHHHHH--------CCCeEEEEe---------------cchHHHHHHHHHHHHHHHh
Confidence 4789999999877663 44567777776 899988652 2233 34456677777777
Q ss_pred CCCCCEEEEEeChhH---HHHHHHHHHccccccCCccCCcceEEEEecCCCCCCCCCchhHHHHHHHHh
Q 020518 120 GWDWPDVVIGHSMGG---KVALHFAQSCARADYGQFVALPKQLWVLDSVPGKVKTENSEGEVEKVLQTL 185 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg---~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~ 185 (325)
+.+ +|.|..|+ .++.......-. +=.-++++|++............+.+..+-.
T Consensus 194 gv~----vI~~~~G~DpAaVafDAi~~Aka--------r~~DvvliDTAGRLhnk~nLM~EL~KI~rV~ 250 (340)
T COG0552 194 GVP----VISGKEGADPAAVAFDAIQAAKA--------RGIDVVLIDTAGRLHNKKNLMDELKKIVRVI 250 (340)
T ss_pred CCe----EEccCCCCCcHHHHHHHHHHHHH--------cCCCEEEEeCcccccCchhHHHHHHHHHHHh
Confidence 755 45545664 344444433332 4456899999877765544444455544443
No 290
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=45.74 E-value=1.8e+02 Score=25.31 Aligned_cols=38 Identities=16% Similarity=0.266 Sum_probs=28.0
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA 94 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~ 94 (325)
|+|+|...- ..|+.+++.|.+ .|+.|..+-..+.+...
T Consensus 2 il~~~~~~p--~~~~~la~~L~~--------~G~~v~~~~~~~~~~~~ 39 (396)
T cd03818 2 ILFVHQNFP--GQFRHLAPALAA--------QGHEVVFLTEPNAAPPP 39 (396)
T ss_pred EEEECCCCc--hhHHHHHHHHHH--------CCCEEEEEecCCCCCCC
Confidence 788886532 358889999988 89999988777665433
No 291
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=45.13 E-value=1.8e+02 Score=24.04 Aligned_cols=65 Identities=11% Similarity=0.080 Sum_probs=44.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEE-EeChhHHHHHHHHHHccccccCCccCCc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVI-GHSMGGKVALHFAQSCARADYGQFVALP 156 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv-GhS~Gg~~a~~~a~~~p~~~~~~~~~~v 156 (325)
.++.++.+|-+|..... .+..+.+..+++..... .+++| .-++++.-+...+.++.. ..+
T Consensus 153 ~~~D~ViIDt~Gr~~~~-----------~~~l~el~~~~~~~~~~-~~~LVl~a~~~~~d~~~~~~~f~~-------~~~ 213 (270)
T PRK06731 153 ARVDYILIDTAGKNYRA-----------SETVEEMIETMGQVEPD-YICLTLSASMKSKDMIEIITNFKD-------IHI 213 (270)
T ss_pred CCCCEEEEECCCCCcCC-----------HHHHHHHHHHHhhhCCC-eEEEEEcCccCHHHHHHHHHHhCC-------CCC
Confidence 36889999988764322 34555566677666665 55554 456788888888888754 368
Q ss_pred ceEEE
Q 020518 157 KQLWV 161 (325)
Q Consensus 157 ~~lvl 161 (325)
.++|+
T Consensus 214 ~~~I~ 218 (270)
T PRK06731 214 DGIVF 218 (270)
T ss_pred CEEEE
Confidence 88887
No 292
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=45.11 E-value=26 Score=32.14 Aligned_cols=50 Identities=18% Similarity=0.245 Sum_probs=31.6
Q ss_pred CCcEEEEeeCCCCCCChHHH-HHHHHHhhhcCCCCCCceeEEEecCCCcccc
Q 020518 257 GMEIAIVRAEKSDRWDPDVI-QRLEGLANRQGDGSEGKVSVHVLPNAGHWVH 307 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~ 307 (325)
..|.++++|..|..+|.... +....+.... +....+.++++++++-|+=.
T Consensus 555 GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~-eG~~s~lrYyeV~naqHfDa 605 (690)
T PF10605_consen 555 GKPAIIVHGRSDALLPVNHTSRPYLGLNRQV-EGRASRLRYYEVTNAQHFDA 605 (690)
T ss_pred CCceEEEecccceecccCCCchHHHHHhhhh-cccccceeEEEecCCeechh
Confidence 35999999999999888433 2222222211 11112488999999888743
No 293
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=44.71 E-value=56 Score=19.70 Aligned_cols=31 Identities=16% Similarity=0.248 Sum_probs=23.8
Q ss_pred eEEEecCCCccccccChHHHHHHHHHHHhcC
Q 020518 295 SVHVLPNAGHWVHVDNPKGLLEIVAPRIASV 325 (325)
Q Consensus 295 ~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~ 325 (325)
+.+.+-++.+++-.|.++++.+.|.+|-+++
T Consensus 28 TvItL~~G~k~vV~Es~~eVi~ki~~y~~~i 58 (60)
T PF06289_consen 28 TVITLTNGKKYVVKESVEEVIEKIIEYRRKI 58 (60)
T ss_pred eEEEEeCCCEEEEECCHHHHHHHHHHHHHhc
Confidence 4455555477888899999999999997653
No 294
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=44.64 E-value=37 Score=27.34 Aligned_cols=20 Identities=25% Similarity=0.222 Sum_probs=18.1
Q ss_pred EEEEeChhHHHHHHHHHHcc
Q 020518 126 VVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p 145 (325)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 89999999999999998654
No 295
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=43.43 E-value=35 Score=28.69 Aligned_cols=22 Identities=50% Similarity=0.675 Sum_probs=18.4
Q ss_pred CCCCCEEEEEeChhHHHHHHHHH
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
+.. +.++.|||+|=+.|+..+.
T Consensus 83 ~~~-p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVK-PDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCC-CceeecccHhHHHHHHHcc
Confidence 356 8899999999998887765
No 296
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=43.37 E-value=2e+02 Score=24.15 Aligned_cols=88 Identities=23% Similarity=0.273 Sum_probs=50.2
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---------------CCCCCCCCCCC-------CC
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---------------GRSAEIEGLDP-------PH 103 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---------------G~S~~~~~~~~-------~~ 103 (325)
+=.|+-|.|. ......+.+.|.++. .+.+++++|.-|. |.+.-|..... ..
T Consensus 170 ~d~fVagvGT-GGTitGvar~Lk~~~------p~i~iv~vdP~~S~~~~~G~g~~~i~GIG~~~ip~~~~~~~iD~v~~V 242 (300)
T COG0031 170 VDAFVAGVGT-GGTITGVARYLKERN------PNVRIVAVDPEGSVLLSGGEGPHKIEGIGAGFVPENLDLDLIDEVIRV 242 (300)
T ss_pred CCEEEEeCCc-chhHHHHHHHHHhhC------CCcEEEEECCCCCcccCCCCCCcccCCCCCCcCCcccccccCceEEEE
Confidence 4445555543 446678888888876 6799999987752 22222211000 01
Q ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHH--HHHHHcc
Q 020518 104 DIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL--HFAQSCA 145 (325)
Q Consensus 104 ~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~--~~a~~~p 145 (325)
+-++-....+.+.++.+ +++|-|.|+.++. .+|.+.+
T Consensus 243 ~d~~A~~~~r~La~~eG-----ilvG~SsGA~~~aa~~~a~~~~ 281 (300)
T COG0031 243 SDEEAIATARRLAREEG-----LLVGISSGAALAAALKLAKELP 281 (300)
T ss_pred CHHHHHHHHHHHHHHhC-----eeecccHHHHHHHHHHHHHhcC
Confidence 22333344445555444 7899999998744 4566554
No 297
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=42.75 E-value=99 Score=23.95 Aligned_cols=66 Identities=17% Similarity=0.117 Sum_probs=43.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
+++.++.+|-+|... .-.+..+++..+++..... .+++|=-+..+.-.+..+..+-+ ...+.
T Consensus 82 ~~~D~vlIDT~Gr~~-----------~d~~~~~el~~~~~~~~~~-~~~LVlsa~~~~~~~~~~~~~~~------~~~~~ 143 (196)
T PF00448_consen 82 KGYDLVLIDTAGRSP-----------RDEELLEELKKLLEALNPD-EVHLVLSATMGQEDLEQALAFYE------AFGID 143 (196)
T ss_dssp TTSSEEEEEE-SSSS-----------THHHHHHHHHHHHHHHSSS-EEEEEEEGGGGGHHHHHHHHHHH------HSSTC
T ss_pred cCCCEEEEecCCcch-----------hhHHHHHHHHHHhhhcCCc-cceEEEecccChHHHHHHHHHhh------cccCc
Confidence 678999999886543 2346777888888888766 67766666655666655544433 01478
Q ss_pred eEEE
Q 020518 158 QLWV 161 (325)
Q Consensus 158 ~lvl 161 (325)
++|+
T Consensus 144 ~lIl 147 (196)
T PF00448_consen 144 GLIL 147 (196)
T ss_dssp EEEE
T ss_pred eEEE
Confidence 8886
No 298
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=42.65 E-value=48 Score=30.37 Aligned_cols=107 Identities=16% Similarity=0.154 Sum_probs=58.4
Q ss_pred CCceEEEecCCCCCCCChHHHHHH----HHhhhhccCCCCceEEEEeCC----CCCCCCCCCCCCCCCCCHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSGRNWRSFSRN----LASTLSQTSASSEWRMVLVDL----RNHGRSAEIEGLDPPHDIANAANDLAN 114 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~~~~~~~~~~----l~~~~~~~~~~~~~~vi~~D~----~G~G~S~~~~~~~~~~~~~~~~~~l~~ 114 (325)
..-||=+-=|++-+......+... |...+++ -|=.|+.-.- +-||.-+.+...........+...+.+
T Consensus 257 ~~ipLTLSiGvg~g~~~~~elg~vA~~~L~lAlgR----GGDQVvIke~~~k~~fyGG~s~~~ekrTRvRaRvis~al~d 332 (655)
T COG3887 257 KNIPLTLSIGVGYGENNLIELGEVAQSNLDLALGR----GGDQVVIKENNGKVRFYGGKSNPMEKRTRVRARVISTALSD 332 (655)
T ss_pred cCcceEEEEEeccCcccHHHHHHHHHHhHHHHhcc----CCceEEEEcCCCceeeeCCCcchhHHhHHHHHHHHHHHHHH
Confidence 355676777777766665544321 1111110 2334443322 224444333221122334556666677
Q ss_pred HHHHhCCCCCEEEEEe------ChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 115 LVKAKGWDWPDVVIGH------SMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 115 ~l~~~~~~~~~~lvGh------S~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
++.+ .+ +++++|| +.|+.+++...+..-. + .+.++++|.
T Consensus 333 ~i~e--~d-~VfImGHk~pDmDalGsAig~~~~A~~~~--------~-~a~~v~dp~ 377 (655)
T COG3887 333 IIKE--SD-NVFIMGHKFPDMDALGSAIGMQKFASMNN--------K-EAFAVLDPE 377 (655)
T ss_pred HHhh--cC-cEEEEccCCCChHHHHHHHHHHHHHHhcc--------c-ccEEEECcc
Confidence 7766 45 9999999 7899999887665443 3 556677753
No 299
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=42.59 E-value=42 Score=27.11 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=17.6
Q ss_pred EEEEeChhHHHHHHHHHHcc
Q 020518 126 VVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~p 145 (325)
.+.|-|+|+.+|..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999998654
No 300
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=42.55 E-value=47 Score=21.17 Aligned_cols=39 Identities=28% Similarity=0.309 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHH----hCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 106 ANAANDLANLVKA----KGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 106 ~~~~~~l~~~l~~----~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
...+++..+.++. -+.+ ++.++|-|.|=.+|.+.++.+.
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK-~VLViGaStGyGLAsRIa~aFg 62 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPK-KVLVIGASTGYGLASRIAAAFG 62 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-S-EEEEES-SSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhcCCCCCCc-eEEEEecCCcccHHHHHHHHhc
Confidence 3344444444443 3556 8999999999888888877763
No 301
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=42.05 E-value=49 Score=24.41 Aligned_cols=18 Identities=28% Similarity=0.202 Sum_probs=16.4
Q ss_pred CEEEEEeChhHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a 141 (325)
.-.+.|.|.|+.++..++
T Consensus 29 ~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 29 VTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCEEEEEcHHHHHHHHHh
Confidence 668889999999999998
No 302
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=41.86 E-value=36 Score=29.81 Aligned_cols=65 Identities=15% Similarity=0.152 Sum_probs=34.6
Q ss_pred CCCCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCCCcccc---ccChHHHHHHHHHHHhc
Q 020518 255 PQGMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNAGHWVH---VDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 255 ~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~---~e~p~~~~~~i~~fl~~ 324 (325)
..+.|++++.|+-|..-+ +....+.+.+...+- .+-.+.+||.|+... -++.+.+...|.+||.+
T Consensus 187 ~~p~P~VIv~gGlDs~qe-D~~~l~~~~l~~rGi----A~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~ 254 (411)
T PF06500_consen 187 EKPYPTVIVCGGLDSLQE-DLYRLFRDYLAPRGI----AMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLAS 254 (411)
T ss_dssp SS-EEEEEEE--TTS-GG-GGHHHHHCCCHHCT-----EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCcchhHH-HHHHHHHHHHHhCCC----EEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhc
Confidence 345799999999997654 333334443322221 033445788887643 34556788888888865
No 303
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=41.31 E-value=47 Score=27.09 Aligned_cols=23 Identities=30% Similarity=0.299 Sum_probs=19.5
Q ss_pred CEEEEEeChhHHHHHHHHHHccc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.-.++|-|.|+.++..+++..+.
T Consensus 28 fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 28 FDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred CCEEEEECHHHHhHHHHHhCCcc
Confidence 34899999999999999987654
No 304
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=40.74 E-value=47 Score=27.33 Aligned_cols=38 Identities=8% Similarity=-0.102 Sum_probs=26.1
Q ss_pred CEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecCC
Q 020518 124 PDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSVP 166 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~ 166 (325)
+++|.|.|+|+.-+...-....+ ...++.+.++.+++.
T Consensus 110 kL~l~GeSLGa~g~~~af~~~~~-----~~~~vdGalw~GpP~ 147 (289)
T PF10081_consen 110 KLYLYGESLGAYGGEAAFDGLDD-----LRDRVDGALWVGPPF 147 (289)
T ss_pred eEEEeccCccccchhhhhccHHH-----hhhhcceEEEeCCCC
Confidence 69999999998866554433222 112789988888764
No 305
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=40.40 E-value=16 Score=28.10 Aligned_cols=34 Identities=12% Similarity=0.263 Sum_probs=23.5
Q ss_pred ceEEEecC---CCCCCCChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 45 STAFVLHG---LLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 45 ~~vv~~HG---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
..||++|. ...+......+++.|.+ +||+++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~--------~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKE--------KGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHH--------CCCEEEEHH
Confidence 35999994 22233455667777777 999998874
No 306
>PF12780 AAA_8: P-loop containing dynein motor region D4; InterPro: IPR024317 The 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four (D1 - D4) correspond to the ATP binding sites with P-loop signatures described previously, and two (D5, D6) are modules in which the P loop has been lost in evolution. This particular entry represents the D4 ATP-binding domain of the motor [].; PDB: 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A 3VKH_A 3VKG_A.
Probab=39.33 E-value=1.5e+02 Score=24.35 Aligned_cols=52 Identities=23% Similarity=0.369 Sum_probs=37.1
Q ss_pred ecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 50 LHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 50 ~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
+=|.+|++ +.-+..|+.+. .++.++-++.. ..|++.++-+|+..++...|.+
T Consensus 36 LvG~~GsG---r~sl~rLaa~i------~~~~~~~i~~~------------~~y~~~~f~~dLk~~~~~ag~~ 87 (268)
T PF12780_consen 36 LVGVGGSG---RQSLARLAAFI------CGYEVFQIEIT------------KGYSIKDFKEDLKKALQKAGIK 87 (268)
T ss_dssp EECTTTSC---HHHHHHHHHHH------TTEEEE-TTTS------------TTTHHHHHHHHHHHHHHHHHCS
T ss_pred EecCCCcc---HHHHHHHHHHH------hccceEEEEee------------CCcCHHHHHHHHHHHHHHHhcc
Confidence 44555544 34445566666 78899988753 5789999999999999888765
No 307
>PHA02114 hypothetical protein
Probab=37.93 E-value=60 Score=21.64 Aligned_cols=34 Identities=15% Similarity=0.167 Sum_probs=28.4
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
.+||+=-.+..+..-|..++..|.+ .||.|++-.
T Consensus 83 gtivldvn~amsr~pwi~v~s~le~--------~g~~vvatq 116 (127)
T PHA02114 83 GTIVLDVNYAMSRAPWIKVISRLEE--------AGFNVVATQ 116 (127)
T ss_pred CeEEEEehhhhccCcHHHHHHHHHh--------cCceeeehh
Confidence 3577777788888999999999998 899999853
No 308
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=37.89 E-value=36 Score=27.74 Aligned_cols=18 Identities=28% Similarity=0.344 Sum_probs=13.6
Q ss_pred CCCCCEEEEEeChhHHHHH
Q 020518 120 GWDWPDVVIGHSMGGKVAL 138 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~ 138 (325)
.++ .++++|||+|..=..
T Consensus 233 ~i~-~I~i~GhSl~~~D~~ 250 (270)
T PF14253_consen 233 DID-EIIIYGHSLGEVDYP 250 (270)
T ss_pred CCC-EEEEEeCCCchhhHH
Confidence 345 899999999975433
No 309
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=36.83 E-value=2.9e+02 Score=24.24 Aligned_cols=72 Identities=4% Similarity=-0.041 Sum_probs=40.4
Q ss_pred ceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 45 STAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---GRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 45 ~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
.+||+++-+.... .....-+..|.+ .|+.|+-+.. |+ |..... ...+.+++++.+...+..
T Consensus 113 ~plviaPamn~~m~~~p~~~~Nl~~L~~--------~G~~vv~P~~-g~~ac~~~g~g----~~~~~~~i~~~v~~~~~~ 179 (390)
T TIGR00521 113 APIILAPAMNENMYNNPAVQENIKRLKD--------DGYIFIEPDS-GLLACGDEGKG----RLAEPETIVKAAEREFSP 179 (390)
T ss_pred CCEEEEeCCChhhcCCHHHHHHHHHHHH--------CCcEEECCCC-cccccccccCC----CCCCHHHHHHHHHHHHhh
Confidence 4677777653322 223445556665 6777665542 32 332221 456788888888888754
Q ss_pred ---hCCCCCEEEEEe
Q 020518 119 ---KGWDWPDVVIGH 130 (325)
Q Consensus 119 ---~~~~~~~~lvGh 130 (325)
+.-. ++.+.|-
T Consensus 180 ~~~~~~~-~vlit~g 193 (390)
T TIGR00521 180 KEDLEGK-RVLITAG 193 (390)
T ss_pred ccccCCc-eEEEecC
Confidence 3323 5556565
No 310
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=35.48 E-value=30 Score=28.42 Aligned_cols=34 Identities=6% Similarity=0.155 Sum_probs=26.4
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
..||++|-...+......+++.|.+ +||+++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~--------kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKE--------KGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHH--------CCCEEEeHH
Confidence 3588999766666666778888887 999998875
No 311
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=35.04 E-value=1.5e+02 Score=25.47 Aligned_cols=76 Identities=11% Similarity=0.075 Sum_probs=46.8
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
.++|+|+..+.++-..++..+...- ...+++-+...| .+... ..+ ++..+.+.+++...|+. +
T Consensus 260 y~LIpGvNDs~e~a~~La~~l~~l~------~~VnLIPynp~~--~~~~~-----~ps-~e~i~~f~~~L~~~Gi~---v 322 (345)
T PRK14457 260 YILLGGVNDLPEHAEELANLLRGFQ------SHVNLIPYNPID--EVEFQ-----RPS-PKRIQAFQRVLEQRGVA---V 322 (345)
T ss_pred EEEECCcCCCHHHHHHHHHHHhcCC------CeEEEecCCCCC--CCCCC-----CCC-HHHHHHHHHHHHHCCCe---E
Confidence 5799999998888777777666421 234444444333 22221 122 34455667777777765 6
Q ss_pred EEEeChhHHHHHH
Q 020518 127 VIGHSMGGKVALH 139 (325)
Q Consensus 127 lvGhS~Gg~~a~~ 139 (325)
.+..|+|.-+...
T Consensus 323 tvR~~~G~di~aa 335 (345)
T PRK14457 323 SVRASRGLDANAA 335 (345)
T ss_pred EEeCCCCCchhhc
Confidence 7899999766544
No 312
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=34.98 E-value=30 Score=27.45 Aligned_cols=34 Identities=12% Similarity=0.300 Sum_probs=25.6
Q ss_pred ceEEEecCC-CCCCCChHHHHHHHHhhhhccCCCCceEEEEeC
Q 020518 45 STAFVLHGL-LGSGRNWRSFSRNLASTLSQTSASSEWRMVLVD 86 (325)
Q Consensus 45 ~~vv~~HG~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D 86 (325)
..||++|.. ..+......+++.|.+ +||+++.++
T Consensus 187 g~IiLlHd~~~~t~~aL~~ii~~lk~--------~Gy~fvtl~ 221 (224)
T TIGR02884 187 GAILLLHAVSKDNAEALDKIIKDLKE--------QGYTFKSLD 221 (224)
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHHH--------CCCEEEEhH
Confidence 469999974 3444566778888887 999999875
No 313
>PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases.
Probab=34.95 E-value=2.1e+02 Score=22.01 Aligned_cols=92 Identities=12% Similarity=0.098 Sum_probs=58.5
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCC-CCCCC-C-------CCCCCCCHHHHHHHHHHHH
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHG-RSAEI-E-------GLDPPHDIANAANDLANLV 116 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G-~S~~~-~-------~~~~~~~~~~~~~~l~~~l 116 (325)
.||=..|.+....-|+.+++.|..++.+ +|+.|..+-..... ..... . .....-+.+.+.-|+.+++
T Consensus 5 aIiGtrGIPa~YGGfET~ve~L~~~l~~----~g~~v~Vyc~~~~~~~~~~~y~gv~l~~i~~~~~g~~~si~yd~~sl~ 80 (185)
T PF09314_consen 5 AIIGTRGIPARYGGFETFVEELAPRLVS----KGIDVTVYCRSDYYPYKEFEYNGVRLVYIPAPKNGSAESIIYDFLSLL 80 (185)
T ss_pred EEEeCCCCCcccCcHHHHHHHHHHHHhc----CCceEEEEEccCCCCCCCcccCCeEEEEeCCCCCCchHHHHHHHHHHH
Confidence 5667788999899999999999887743 56666665443222 21110 0 0002235778888888877
Q ss_pred HHhC--------CCCCEEEEEeChhHHHHHHHHH
Q 020518 117 KAKG--------WDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 117 ~~~~--------~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
..+. .+ -++++|.+.|+.+...+-.
T Consensus 81 ~al~~~~~~~~~~~-ii~ilg~~~g~~~~~~~r~ 113 (185)
T PF09314_consen 81 HALRFIKQDKIKYD-IILILGYGIGPFFLPFLRK 113 (185)
T ss_pred HHHHHHhhccccCC-EEEEEcCCccHHHHHHHHh
Confidence 7662 12 3677899988887766554
No 314
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=33.98 E-value=44 Score=37.08 Aligned_cols=29 Identities=34% Similarity=0.477 Sum_probs=24.3
Q ss_pred HHHHHHHhCCCCCEEEEEeChhHHHHHHHH
Q 020518 112 LANLVKAKGWDWPDVVIGHSMGGKVALHFA 141 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a 141 (325)
+.+++...|+. +-.++|||+|=+.|+.++
T Consensus 664 l~~lL~~~Gi~-Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFK-ADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCc-cceeecCCHHHHHHHHHh
Confidence 45667788998 999999999998888766
No 315
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=33.33 E-value=2.2e+02 Score=21.86 Aligned_cols=61 Identities=16% Similarity=0.292 Sum_probs=39.4
Q ss_pred CCCceEEEecCCCCCCCChH--HHHHHHHhhhhccCCCCceEEEEeCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 42 PYTSTAFVLHGLLGSGRNWR--SFSRNLASTLSQTSASSEWRMVLVDLR--NHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~--G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
..++.+|++-|+.++..+-. .+...|.+ .|++++.+|-- -||.+.. -.++-++-.+.+..+
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~--------~G~~~y~LDGDnvR~gL~~d-----LgFs~edR~eniRRv 84 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFA--------KGYHVYLLDGDNVRHGLNRD-----LGFSREDRIENIRRV 84 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHH--------cCCeEEEecChhHhhcccCC-----CCCChHHHHHHHHHH
Confidence 34678999999998775432 24445555 89999999832 2555544 345666665555444
No 316
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=32.43 E-value=73 Score=25.72 Aligned_cols=18 Identities=28% Similarity=0.250 Sum_probs=16.2
Q ss_pred EEEEEeChhHHHHHHHHH
Q 020518 125 DVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~ 142 (325)
-.+.|-|+|+.++..++.
T Consensus 33 ~~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 33 KRFAGASAGSLVAAVLLT 50 (246)
T ss_pred CEEEEECHHHHHHHHHhc
Confidence 479999999999999984
No 317
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=32.32 E-value=2.5e+02 Score=22.18 Aligned_cols=63 Identities=5% Similarity=0.038 Sum_probs=34.7
Q ss_pred CCCCceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCce-EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHh
Q 020518 41 RPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEW-RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAK 119 (325)
Q Consensus 41 ~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~ 119 (325)
+.+...|++.||...++.......+.+... .|| .|+....-|+- .++++.+.++..
T Consensus 135 ~k~e~~vlmgHGt~h~s~~~YacLd~~~~~-------~~f~~v~v~~ve~yP----------------~~d~vi~~l~~~ 191 (265)
T COG4822 135 NKDEILVLMGHGTDHHSNAAYACLDHVLDE-------YGFDNVFVAAVEGYP----------------LVDTVIEYLRKN 191 (265)
T ss_pred CcCeEEEEEecCCCccHHHHHHHHHHHHHh-------cCCCceEEEEecCCC----------------cHHHHHHHHHHc
Confidence 345667888999877665554444444321 555 44443332221 245556666666
Q ss_pred CCCCCEEE
Q 020518 120 GWDWPDVV 127 (325)
Q Consensus 120 ~~~~~~~l 127 (325)
++. .+.|
T Consensus 192 ~~~-~v~L 198 (265)
T COG4822 192 GIK-EVHL 198 (265)
T ss_pred CCc-eEEE
Confidence 776 5544
No 318
>PRK00103 rRNA large subunit methyltransferase; Provisional
Probab=32.01 E-value=1.5e+02 Score=22.07 Aligned_cols=46 Identities=22% Similarity=0.185 Sum_probs=30.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGK 135 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 135 (325)
.+-.+|++|-+| ...+-+++++.+..+...-.-+ -+++||-+.|=.
T Consensus 66 ~~~~~i~LDe~G-----------k~~sS~~fA~~l~~~~~~g~~~-i~F~IGGa~G~~ 111 (157)
T PRK00103 66 KGARVIALDERG-----------KQLSSEEFAQELERWRDDGRSD-VAFVIGGADGLS 111 (157)
T ss_pred CCCEEEEEcCCC-----------CcCCHHHHHHHHHHHHhcCCcc-EEEEEcCccccC
Confidence 344689999875 3456678888888774433224 677888887743
No 319
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=31.98 E-value=2.3e+02 Score=21.50 Aligned_cols=26 Identities=35% Similarity=0.646 Sum_probs=17.0
Q ss_pred HhCCCCCEEEEEeC-hhHHHHHHHHHHccc
Q 020518 118 AKGWDWPDVVIGHS-MGGKVALHFAQSCAR 146 (325)
Q Consensus 118 ~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~ 146 (325)
+.|.. |-+|+||| ||.. +.+---+|+
T Consensus 62 ~~Gf~-PDvI~~H~GWGe~--Lflkdv~P~ 88 (171)
T PF12000_consen 62 AQGFV-PDVIIAHPGWGET--LFLKDVFPD 88 (171)
T ss_pred HcCCC-CCEEEEcCCcchh--hhHHHhCCC
Confidence 33777 88999998 4544 334444776
No 320
>PRK14974 cell division protein FtsY; Provisional
Probab=31.80 E-value=2.7e+02 Score=23.91 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=44.4
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
.++.++.+|-.|.... -.++.+.+..+.+....+ .+++|.-+.-|.-++.-+..+.+ ...+.
T Consensus 221 ~~~DvVLIDTaGr~~~-----------~~~lm~eL~~i~~~~~pd-~~iLVl~a~~g~d~~~~a~~f~~------~~~~~ 282 (336)
T PRK14974 221 RGIDVVLIDTAGRMHT-----------DANLMDELKKIVRVTKPD-LVIFVGDALAGNDAVEQAREFNE------AVGID 282 (336)
T ss_pred CCCCEEEEECCCccCC-----------cHHHHHHHHHHHHhhCCc-eEEEeeccccchhHHHHHHHHHh------cCCCC
Confidence 5678888887755432 235666777777777777 77788777777777766665532 01567
Q ss_pred eEEEE
Q 020518 158 QLWVL 162 (325)
Q Consensus 158 ~lvli 162 (325)
++|+-
T Consensus 283 giIlT 287 (336)
T PRK14974 283 GVILT 287 (336)
T ss_pred EEEEe
Confidence 77763
No 321
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=31.47 E-value=53 Score=28.06 Aligned_cols=18 Identities=50% Similarity=0.621 Sum_probs=15.0
Q ss_pred EEEEEeChhHHHHHHHHH
Q 020518 125 DVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~ 142 (325)
..++|||+|=+.|+.++.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 468999999988888774
No 322
>PLN02735 carbamoyl-phosphate synthase
Probab=31.21 E-value=2.3e+02 Score=28.92 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=58.0
Q ss_pred cccceEEEEcccCCCC--CCCceEEEecCCCCCCC-----ChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDR--PYTSTAFVLHGLLGSGR-----NWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEI 96 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~--~~~~~vv~~HG~~~~~~-----~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~ 96 (325)
......|..|....+. .+++.|+++-+.+.... .|- ..+..|.+ .||.++++|.-..-.|...
T Consensus 554 ~~t~y~y~ty~~~~~~~~~~~kkvlilG~G~~~igq~iefd~~~v~~~~alr~--------~G~~tI~v~~npetvstd~ 625 (1102)
T PLN02735 554 ANTPYMYSSYDGECESAPTNKKKVLILGGGPNRIGQGIEFDYCCCHASFALQD--------AGYETIMMNSNPETVSTDY 625 (1102)
T ss_pred CCCCcceeECCCCCCcccCCCceEEEeCccccccCcccccceeHHHHHHHHHH--------cCCeEEEEeCCCccccCCc
Confidence 3446777777653322 24455666655432121 222 35666776 8999999987544444221
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 97 EGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 97 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
.-.+..|-..-..+++.++++..+++ -+ =-++||..++.+|..
T Consensus 626 ~~aD~~y~~pl~~e~vl~i~~~e~~d-~V---i~~~Ggq~~l~la~~ 668 (1102)
T PLN02735 626 DTSDRLYFEPLTVEDVLNVIDLERPD-GI---IVQFGGQTPLKLALP 668 (1102)
T ss_pred ccCCeEEEEeCCHHHHHHHHHHhCCC-EE---EECCCchHHHHHHHH
Confidence 11112232333477788888888776 22 234676666655543
No 323
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=30.88 E-value=3.8e+02 Score=23.68 Aligned_cols=74 Identities=8% Similarity=-0.018 Sum_probs=42.2
Q ss_pred CceEEEecCCCCCC---CChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLGSG---RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---GRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 44 ~~~vv~~HG~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
+.|||+++.+.... .....-+..|.+ .|+.|+-+. +|+ |.... ....+.++++..+...+.
T Consensus 116 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~--------~G~~ii~P~-~g~la~~~~g~----gr~~~~~~I~~~~~~~~~ 182 (399)
T PRK05579 116 TAPVLVAPAMNTQMWENPATQRNLATLRS--------RGVEIIGPA-SGRLACGDVGP----GRMAEPEEIVAAAERALS 182 (399)
T ss_pred CCCEEEEeCCChhHcCCHHHHHHHHHHHH--------CCCEEECCC-CccccCCCcCC----CCCCCHHHHHHHHHHHhh
Confidence 55788887653322 123445566665 788887554 343 22222 145678888888888775
Q ss_pred HhCCCC-CEEEEEe
Q 020518 118 AKGWDW-PDVVIGH 130 (325)
Q Consensus 118 ~~~~~~-~~~lvGh 130 (325)
.....+ ++.+-|-
T Consensus 183 ~~~l~gk~vlITgG 196 (399)
T PRK05579 183 PKDLAGKRVLITAG 196 (399)
T ss_pred hcccCCCEEEEeCC
Confidence 433332 5556665
No 324
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=30.71 E-value=3.2e+02 Score=23.84 Aligned_cols=88 Identities=14% Similarity=0.254 Sum_probs=58.4
Q ss_pred CCceEEEecCCCCCC-------CChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q 020518 43 YTSTAFVLHGLLGSG-------RNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANL 115 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~-------~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~ 115 (325)
....||++||-+.+. +.|..+++.+.+ ++ -+-.+|.--.|..+ .+++.+.-++.+
T Consensus 170 ~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~--------r~-lip~~D~AYQGF~~---------GleeDa~~lR~~ 231 (396)
T COG1448 170 PEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKE--------RG-LIPFFDIAYQGFAD---------GLEEDAYALRLF 231 (396)
T ss_pred CCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHH--------cC-Ceeeeehhhhhhcc---------chHHHHHHHHHH
Confidence 345699999987654 568888888876 33 44556665445432 266777777777
Q ss_pred HHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 116 VKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 116 l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+... +-.+|..|.-=..+ .|.+ ||-++.+++..
T Consensus 232 a~~~----~~~lva~S~SKnfg-----LYgE--------RVGa~~vva~~ 264 (396)
T COG1448 232 AEVG----PELLVASSFSKNFG-----LYGE--------RVGALSVVAED 264 (396)
T ss_pred HHhC----CcEEEEehhhhhhh-----hhhh--------ccceeEEEeCC
Confidence 7653 23788888765443 3677 99999998653
No 325
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=30.68 E-value=2.2e+02 Score=25.40 Aligned_cols=66 Identities=11% Similarity=0.121 Sum_probs=44.3
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
.+|.++.+|-+|.-. .-+.+.+.+..+.+...+. .+++|--++-|.-+...|..+-+. ..+.
T Consensus 181 ~~~DvViIDTaGr~~-----------~d~~lm~El~~i~~~~~p~-e~lLVlda~~Gq~a~~~a~~F~~~------~~~~ 242 (429)
T TIGR01425 181 ENFDIIIVDTSGRHK-----------QEDSLFEEMLQVAEAIQPD-NIIFVMDGSIGQAAEAQAKAFKDS------VDVG 242 (429)
T ss_pred CCCCEEEEECCCCCc-----------chHHHHHHHHHHhhhcCCc-EEEEEeccccChhHHHHHHHHHhc------cCCc
Confidence 478889999887322 1235666677777777777 788888888777777777666430 1467
Q ss_pred eEEE
Q 020518 158 QLWV 161 (325)
Q Consensus 158 ~lvl 161 (325)
++|+
T Consensus 243 g~Il 246 (429)
T TIGR01425 243 SVII 246 (429)
T ss_pred EEEE
Confidence 7776
No 326
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=30.47 E-value=1.4e+02 Score=25.30 Aligned_cols=94 Identities=14% Similarity=0.015 Sum_probs=51.8
Q ss_pred CCceEEEecCCCCC--CC---ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCC-------------CCCC
Q 020518 43 YTSTAFVLHGLLGS--GR---NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLD-------------PPHD 104 (325)
Q Consensus 43 ~~~~vv~~HG~~~~--~~---~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~-------------~~~~ 104 (325)
.+..|+|+-|-... .. +--.+...|... .+.+++++=-+|-|.-......+ ....
T Consensus 30 ~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~-------d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~g 102 (423)
T COG3673 30 MKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRA-------DGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQG 102 (423)
T ss_pred cceEEEEecCchhhcCCCCcchHHHHHHHHhcC-------CCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHH
Confidence 35677788775331 12 222333344321 56778887778887542211000 0112
Q ss_pred HHH-HHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHH
Q 020518 105 IAN-AANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 105 ~~~-~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+.+ +.+...-++.+..+.-+|+++|+|-|+.+|--+|..
T Consensus 103 L~~nI~~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 103 LVQNIREAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 222 233334444555443389999999999999888875
No 327
>PRK14581 hmsF outer membrane N-deacetylase; Provisional
Probab=30.44 E-value=96 Score=29.37 Aligned_cols=81 Identities=16% Similarity=0.112 Sum_probs=49.9
Q ss_pred CCceEEEecCCCCCC----------CChHHHHHHHHhhhhccCCCCceEEEEeCCC-C--CCCCCCCCC---CCCCCCHH
Q 020518 43 YTSTAFVLHGLLGSG----------RNWRSFSRNLASTLSQTSASSEWRMVLVDLR-N--HGRSAEIEG---LDPPHDIA 106 (325)
Q Consensus 43 ~~~~vv~~HG~~~~~----------~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~-G--~G~S~~~~~---~~~~~~~~ 106 (325)
++.+|++.|...... ..|+..+..|.+ .||+++.++-- . .|....+.. .+.+....
T Consensus 47 ~~~~VLmYH~V~d~~~~~~~~~Vspe~Fe~QL~~Lk~--------nGY~~VSL~el~~~~~g~~~LP~KaV~LTFDDGy~ 118 (672)
T PRK14581 47 NTFVVIAYHDVEDDSADQRYLSVRSSALNEQFVWLRD--------NGYHVVSVDQILAARNGGPTLPDKAVLLTFDDGYS 118 (672)
T ss_pred CceEEEEeCcccCCCCccCccccCHHHHHHHHHHHHH--------CcCEEecHHHHHHHHhcCCCCCCCeEEEEEEcCCc
Confidence 467788888875432 357788888887 89999998622 1 122211110 00112233
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeC
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHS 131 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS 131 (325)
+....+..+|++.+....+.++|.-
T Consensus 119 sny~~AlPILKkyg~pATfFvVg~w 143 (672)
T PRK14581 119 SFYRRVYPLLKAYKWSAVLAPVGTW 143 (672)
T ss_pred chHHHHHHHHHHcCCCEEEEEechh
Confidence 4667788899999987566677643
No 328
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=30.38 E-value=66 Score=30.74 Aligned_cols=22 Identities=32% Similarity=0.357 Sum_probs=18.6
Q ss_pred CCCCCEEEEEeChhHHHHHHHHH
Q 020518 120 GWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 120 ~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
++. --++.|.|+||+++..+|.
T Consensus 64 ~~~-~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVR-VDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCC-CceEEeeCHHHHHHHHHHc
Confidence 455 5689999999999999986
No 329
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=30.34 E-value=2.5e+02 Score=25.41 Aligned_cols=95 Identities=17% Similarity=0.144 Sum_probs=58.4
Q ss_pred EEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEE
Q 020518 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVV 127 (325)
Q Consensus 48 v~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l 127 (325)
+|--|++.+...-...+-..+++ .||.|+.+|--|.-... +.+...+..+++...++ .++.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~-------~gfDVvLiDTAGR~~~~-----------~~lm~~l~k~~~~~~pd-~i~~ 502 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARN-------QGFDVVLIDTAGRMHNN-----------APLMTSLAKLIKVNKPD-LILF 502 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHh-------cCCCEEEEeccccccCC-----------hhHHHHHHHHHhcCCCc-eEEE
Confidence 45566766654333333333332 89999999977644332 35667788888888888 9999
Q ss_pred EEeChhHHHHHHHHHHccccccC-CccCCcceEEE
Q 020518 128 IGHSMGGKVALHFAQSCARADYG-QFVALPKQLWV 161 (325)
Q Consensus 128 vGhS~Gg~~a~~~a~~~p~~~~~-~~~~~v~~lvl 161 (325)
||.-+=|.-++.-+..+-+.... ..+..+.++++
T Consensus 503 vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 503 VGEALVGNDSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred ehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEE
Confidence 99988777776655443221100 01225677666
No 330
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=30.30 E-value=44 Score=28.64 Aligned_cols=19 Identities=37% Similarity=0.382 Sum_probs=16.5
Q ss_pred EEEEEeChhHHHHHHHHHH
Q 020518 125 DVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~ 143 (325)
-.+.|-|.||.+|+.++..
T Consensus 43 DlIaGTStGgIIAa~la~g 61 (344)
T cd07217 43 DFVGGTSTGSIIAACIALG 61 (344)
T ss_pred cEEEEecHHHHHHHHHHcC
Confidence 3788999999999999864
No 331
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=30.20 E-value=84 Score=23.33 Aligned_cols=45 Identities=20% Similarity=0.167 Sum_probs=29.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
++-.+|++|-.| ...+-+++++.+..+...-..+ -+++||-+.|=
T Consensus 66 ~~~~~i~Ld~~G-----------k~~sS~~fA~~l~~~~~~g~~~-i~F~IGG~~G~ 110 (155)
T PF02590_consen 66 PNDYVILLDERG-----------KQLSSEEFAKKLERWMNQGKSD-IVFIIGGADGL 110 (155)
T ss_dssp TTSEEEEE-TTS-----------EE--HHHHHHHHHHHHHTTS-E-EEEEE-BTTB-
T ss_pred CCCEEEEEcCCC-----------ccCChHHHHHHHHHHHhcCCce-EEEEEecCCCC
Confidence 566788998775 4566778888888888764334 67899999983
No 332
>KOG2170 consensus ATPase of the AAA+ superfamily [General function prediction only]
Probab=30.15 E-value=46 Score=27.80 Aligned_cols=20 Identities=30% Similarity=0.700 Sum_probs=17.4
Q ss_pred CCCceEEEecCCCCCCCChH
Q 020518 42 PYTSTAFVLHGLLGSGRNWR 61 (325)
Q Consensus 42 ~~~~~vv~~HG~~~~~~~~~ 61 (325)
+.+|.++=+||+.|+..+|-
T Consensus 107 p~KPLvLSfHG~tGTGKN~V 126 (344)
T KOG2170|consen 107 PRKPLVLSFHGWTGTGKNYV 126 (344)
T ss_pred CCCCeEEEecCCCCCchhHH
Confidence 57899999999999998774
No 333
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=29.98 E-value=1.4e+02 Score=23.70 Aligned_cols=35 Identities=17% Similarity=0.158 Sum_probs=25.5
Q ss_pred CEEEEEeChhHH----HHHHHHHHccccccCCccCCcceEEEEecCCCC
Q 020518 124 PDVVIGHSMGGK----VALHFAQSCARADYGQFVALPKQLWVLDSVPGK 168 (325)
Q Consensus 124 ~~~lvGhS~Gg~----~a~~~a~~~p~~~~~~~~~~v~~lvli~~~~~~ 168 (325)
++.++||.||-. .+.++...| .|+.+|-++++...
T Consensus 57 ~iSvmg~GmGipS~sIY~~ELi~~y----------~Vk~iIRvGt~Gal 95 (236)
T COG0813 57 KISVMGHGMGIPSISIYSRELITDY----------GVKKIIRVGTCGAL 95 (236)
T ss_pred EEEEEEecCCCccHHHHHHHHHHHh----------CcceEEEEEccccc
Confidence 899999999944 444455554 68999988877544
No 334
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This domain contains an ATP binding P-loop motif [].; GO: 0005524 ATP binding, 0016301 kinase activity, 0016772 transferase activity, transferring phosphorus-containing groups, 0000103 sulfate assimilation; PDB: 1M7H_B 1M7G_B 3CR7_B 1D6J_A 2OFW_G 1X6V_B 1XNJ_A 1XJQ_B 2PEY_A 2PEZ_B ....
Probab=29.74 E-value=72 Score=23.71 Aligned_cols=38 Identities=29% Similarity=0.420 Sum_probs=24.4
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~ 87 (325)
++.+|++-|++++.-. -++..|.+.+.+ .|+.++.+|-
T Consensus 1 ~g~vIwltGlsGsGKt--TlA~~L~~~L~~----~g~~~~~LDg 38 (156)
T PF01583_consen 1 KGFVIWLTGLSGSGKT--TLARALERRLFA----RGIKVYLLDG 38 (156)
T ss_dssp S-EEEEEESSTTSSHH--HHHHHHHHHHHH----TTS-EEEEEH
T ss_pred CCEEEEEECCCCCCHH--HHHHHHHHHHHH----cCCcEEEecC
Confidence 3679999999998753 344444443322 7899999973
No 335
>cd00006 PTS_IIA_man PTS_IIA, PTS system, mannose/sorbose specific IIA subunit. The bacterial phosphoenolpyruvate: sugar phosphotransferase system (PTS) is a multi-protein system involved in the regulation of a variety of metabolic and transcriptional processes. This family is one of four structurally and functionally distinct group IIA PTS system cytoplasmic enzymes, necessary for the uptake of carbohydrates across the cytoplasmic membrane and their phosphorylation. IIA subunits receive phosphoryl groups from HPr and transfer them to IIB subunits, which in turn phosphorylate the substrate.
Probab=29.60 E-value=2e+02 Score=20.08 Aligned_cols=71 Identities=10% Similarity=0.122 Sum_probs=44.3
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
.||.-|| .-+......+..+.. ..-.+.++++. ...+.+++.+.+.++++.......+
T Consensus 3 ili~sHG--~~A~gi~~~~~~i~G--------~~~~i~~~~~~------------~~~~~~~~~~~i~~~i~~~~~~~~v 60 (122)
T cd00006 3 IIIATHG--GFASGLLNSAEMILG--------EQENVEAIDFP------------PGESPDDLLEKIKAALAELDSGEGV 60 (122)
T ss_pred EEEEcCH--HHHHHHHHHHHHhcC--------CCCCeEEEEeC------------CCCCHHHHHHHHHHHHHHhCCCCcE
Confidence 4778888 333334444444432 23366777765 5668889999999999988654255
Q ss_pred EEEEeChhHHHHH
Q 020518 126 VVIGHSMGGKVAL 138 (325)
Q Consensus 126 ~lvGhS~Gg~~a~ 138 (325)
+++--=+||-..-
T Consensus 61 iil~Dl~GGSp~n 73 (122)
T cd00006 61 LILTDLFGGSPNN 73 (122)
T ss_pred EEEEeCCCCCHHH
Confidence 5555555776644
No 336
>PF03283 PAE: Pectinacetylesterase
Probab=28.65 E-value=3.2e+02 Score=23.72 Aligned_cols=20 Identities=30% Similarity=0.320 Sum_probs=16.9
Q ss_pred CEEEEEeChhHHHHHHHHHH
Q 020518 124 PDVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~ 143 (325)
+++|-|.|.||.-++..+-.
T Consensus 157 ~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 157 QVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred eEEEeccChHHHHHHHHHHH
Confidence 89999999999988876543
No 337
>PRK08762 molybdopterin biosynthesis protein MoeB; Validated
Probab=27.93 E-value=3.3e+02 Score=23.66 Aligned_cols=36 Identities=22% Similarity=0.153 Sum_probs=26.7
Q ss_pred HhCCCCCEEEEEeC-hhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 118 AKGWDWPDVVIGHS-MGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 118 ~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
.+.-. ++.++|-. .|+.++..++.. -|..+++++.-
T Consensus 132 ~l~~~-~VlvvG~GG~Gs~ia~~La~~-----------Gvg~i~lvD~d 168 (376)
T PRK08762 132 RLLEA-RVLLIGAGGLGSPAALYLAAA-----------GVGTLGIVDHD 168 (376)
T ss_pred HHhcC-cEEEECCCHHHHHHHHHHHHc-----------CCCeEEEEeCC
Confidence 44445 89999987 677777777654 58899999864
No 338
>PRK07877 hypothetical protein; Provisional
Probab=27.20 E-value=1.2e+02 Score=29.18 Aligned_cols=37 Identities=24% Similarity=0.136 Sum_probs=28.7
Q ss_pred HHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCc-ceEEEEecC
Q 020518 117 KAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALP-KQLWVLDSV 165 (325)
Q Consensus 117 ~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v-~~lvli~~~ 165 (325)
+.+.-. +|.|+|-+.|+.++..+|.. -| ..++++|.-
T Consensus 103 ~~L~~~-~V~IvG~GlGs~~a~~Lara-----------GvvG~l~lvD~D 140 (722)
T PRK07877 103 ERLGRL-RIGVVGLSVGHAIAHTLAAE-----------GLCGELRLADFD 140 (722)
T ss_pred HHHhcC-CEEEEEecHHHHHHHHHHHc-----------cCCCeEEEEcCC
Confidence 344555 89999999999999888865 44 888988853
No 339
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=27.16 E-value=53 Score=27.26 Aligned_cols=20 Identities=35% Similarity=0.489 Sum_probs=17.3
Q ss_pred EEEEEeChhHHHHHHHHHHc
Q 020518 125 DVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~~ 144 (325)
-.++|-|.||.+|+.++..+
T Consensus 36 D~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 36 DLFAGTSAGSLIALGLALGY 55 (288)
T ss_pred eEEEEeCHHHHHHHHHHcCc
Confidence 47889999999999998754
No 340
>cd05312 NAD_bind_1_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 1. Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists of eukaryotic and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH
Probab=26.84 E-value=2.7e+02 Score=23.07 Aligned_cols=57 Identities=26% Similarity=0.271 Sum_probs=33.9
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCHHHHH--------HHHHHHHHHhCCCCCEEEEEeCh-hHHHHHHHHHH
Q 020518 81 RMVLVDLRNHGRSAEIEGLDPPHDIANAA--------NDLANLVKAKGWDWPDVVIGHSM-GGKVALHFAQS 143 (325)
Q Consensus 81 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~--------~~l~~~l~~~~~~~~~~lvGhS~-Gg~~a~~~a~~ 143 (325)
+++.+|..|-=..+... -......++ .+|.+.++.++ +-+|+|-|- ||.+.-.+...
T Consensus 61 ~i~~vD~~Gll~~~r~~---l~~~~~~~a~~~~~~~~~~L~e~i~~v~---ptvlIG~S~~~g~ft~evv~~ 126 (279)
T cd05312 61 KIWLVDSKGLLTKDRKD---LTPFKKPFARKDEEKEGKSLLEVVKAVK---PTVLIGLSGVGGAFTEEVVRA 126 (279)
T ss_pred eEEEEcCCCeEeCCCCc---chHHHHHHHhhcCcccCCCHHHHHHhcC---CCEEEEeCCCCCCCCHHHHHH
Confidence 89999999854333321 011112222 25666677666 559999995 77766555543
No 341
>cd01853 Toc34_like Toc34-like (Translocon at the Outer-envelope membrane of Chloroplasts). This family contains several Toc proteins, including Toc34, Toc33, Toc120, Toc159, Toc86, Toc125, and Toc90. The Toc complex at the outer envelope membrane of chloroplasts is a molecular machine of ~500 kDa that contains a single Toc159 protein, four Toc75 molecules, and four or five copies of Toc34. Toc64 and Toc12 are associated with the translocon, but do not appear to be part of the core complex. The Toc translocon initiates the import of nuclear-encoded preproteins from the cytosol into the organelle. Toc34 and Toc159 are both GTPases, while Toc75 is a beta-barrel integral membrane protein. Toc159 is equally distributed between a soluble cytoplasmic form and a membrane-inserted form, suggesting that assembly of the Toc complex is dynamic. Toc34 and Toc75 act sequentially to mediate docking and insertion of Toc159 resulting in assembly of the functional translocon.
Probab=26.54 E-value=1e+02 Score=25.02 Aligned_cols=49 Identities=10% Similarity=0.039 Sum_probs=27.9
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChh
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMG 133 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~G 133 (325)
.|..+..+|.||++.+... ...-+...+.+..+++..++ .++++-..+.
T Consensus 77 ~g~~i~vIDTPGl~~~~~~-----~~~~~~~~~~I~~~l~~~~i--dvIL~V~rlD 125 (249)
T cd01853 77 DGFKLNIIDTPGLLESVMD-----QRVNRKILSSIKRYLKKKTP--DVVLYVDRLD 125 (249)
T ss_pred CCeEEEEEECCCcCcchhh-----HHHHHHHHHHHHHHHhccCC--CEEEEEEcCC
Confidence 4667889999999976431 22233444445555554443 3455554443
No 342
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=26.46 E-value=4.8e+02 Score=26.71 Aligned_cols=107 Identities=14% Similarity=0.179 Sum_probs=56.2
Q ss_pred cccceEEEEcccCCCC--C-CCceEEEecCCCCC---CC--ChH--HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCC
Q 020518 26 SLQTLAYEEVRSSSDR--P-YTSTAFVLHGLLGS---GR--NWR--SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 26 ~~~~l~y~~~~~~~~~--~-~~~~vv~~HG~~~~---~~--~~~--~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~ 95 (325)
......|..|....+. . +++.|+++-+.+.. .- .|- ..+..|.+ .||.++.+|.--..-|..
T Consensus 534 ~~t~~~y~ty~~~~~~~~~~~~kkvLIlG~G~~rig~~~efdy~~v~~~~aLk~--------~G~~vI~vn~npetvs~~ 605 (1068)
T PRK12815 534 AKTPYYYSTYFGESEAEPSSEKKKVLILGSGPIRIGQGIEFDYSSVHAAFALKK--------EGYETIMINNNPETVSTD 605 (1068)
T ss_pred CCCCceeeeCCCCCcCccCCCCceEEEecccccccccccccchhHHHHHHHHHH--------cCCEEEEEeCCccccccc
Confidence 3446677777653322 1 45667666554321 11 222 34666666 899999998654333322
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHc
Q 020518 96 IEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 96 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
....+..|.-....+++.++++..+++ -++. ++|+..+..++...
T Consensus 606 ~~~aD~~y~ep~~~e~vl~I~~~e~~d-gVI~---~~g~~~~~~la~~l 650 (1068)
T PRK12815 606 YDTADRLYFEPLTLEDVLNVAEAENIK-GVIV---QFGGQTAINLAKGL 650 (1068)
T ss_pred cccCceEEEccCCHHHHHHHHhhcCCC-EEEE---ecCcHHHHHHHHHH
Confidence 110001121122357778888887766 3333 46666666655443
No 343
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.29 E-value=2.9e+02 Score=20.88 Aligned_cols=51 Identities=20% Similarity=0.146 Sum_probs=36.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
.|++.+.+|.=++=-... ...-..++.+.+.++.+..+.+ ++.++-.|.|.
T Consensus 39 ~Gik~li~DkDNTL~~~~-----~~~i~~~~~~~~~~l~~~~~~~-~v~IvSNsaGs 89 (168)
T PF09419_consen 39 KGIKALIFDKDNTLTPPY-----EDEIPPEYAEWLNELKKQFGKD-RVLIVSNSAGS 89 (168)
T ss_pred cCceEEEEcCCCCCCCCC-----cCcCCHHHHHHHHHHHHHCCCC-eEEEEECCCCc
Confidence 899999999866532222 2334456777777777777766 89999999863
No 344
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=26.28 E-value=1.2e+02 Score=16.93 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=24.2
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKA 118 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~ 118 (325)
.+|.+..+|+||+-. ...|+++..+.+...+..
T Consensus 12 ~~y~~~~pdlpg~~t--------~G~t~eea~~~~~eal~~ 44 (48)
T PF03681_consen 12 GGYVAYFPDLPGCFT--------QGDTLEEALENAKEALEL 44 (48)
T ss_dssp SSEEEEETTCCTCEE--------EESSHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCccChhh--------cCCCHHHHHHHHHHHHHH
Confidence 789999999998752 245677777777766653
No 345
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.00 E-value=1.2e+02 Score=24.65 Aligned_cols=22 Identities=18% Similarity=0.307 Sum_probs=18.6
Q ss_pred CEEEEEeChhHHHHHHHHHHcc
Q 020518 124 PDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
.-.++|-|.|+.++..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3469999999999999998654
No 346
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=25.96 E-value=81 Score=25.83 Aligned_cols=67 Identities=13% Similarity=0.031 Sum_probs=41.9
Q ss_pred CceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCC
Q 020518 44 TSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGW 121 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 121 (325)
.|.||++.|+-++.- .-..++..|.. +|++|+++..| ..-+..-.-+-.+-.++-.
T Consensus 55 ~~vlIv~eG~DaAGKG~~I~~l~~~lDP--------Rg~~V~s~~~P--------------t~eE~~~p~lWRfw~~lP~ 112 (264)
T TIGR03709 55 RSLLLVLQAMDAAGKDGTIRHVMSGVNP--------QGCQVTSFKAP--------------SAEELDHDFLWRIHKALPE 112 (264)
T ss_pred CcEEEEEECCCCCCchHHHHHHHHhcCC--------CeeEEEeCCCC--------------CHHHHcCchHHHHHHhCCC
Confidence 589999999977664 23445555555 78899888544 1112222235556666655
Q ss_pred CCCEEEEEeCh
Q 020518 122 DWPDVVIGHSM 132 (325)
Q Consensus 122 ~~~~~lvGhS~ 132 (325)
.+.+.|+=-||
T Consensus 113 ~G~i~IF~RSW 123 (264)
T TIGR03709 113 RGEIGIFNRSH 123 (264)
T ss_pred CCeEEEEcCcc
Confidence 55777777776
No 347
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=25.43 E-value=3.2e+02 Score=21.40 Aligned_cols=37 Identities=5% Similarity=-0.023 Sum_probs=31.9
Q ss_pred CcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecCC
Q 020518 258 MEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPNA 302 (325)
Q Consensus 258 ~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (325)
.|.+++.|..+-..+++..+.+.+.+.+ --++.++.+
T Consensus 54 yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~--------GGfl~~D~~ 90 (207)
T PF13709_consen 54 YPFLYWPGHGDFPLSDEEIANLRRYLEN--------GGFLLFDDR 90 (207)
T ss_pred CCEEEEeCCCCCCCCHHHHHHHHHHHHc--------CCEEEEECC
Confidence 6999999999998899999999999887 567777775
No 348
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=25.35 E-value=72 Score=23.94 Aligned_cols=21 Identities=33% Similarity=0.290 Sum_probs=16.9
Q ss_pred CEEEEEeChhHHHHHHHHHHc
Q 020518 124 PDVVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 124 ~~~lvGhS~Gg~~a~~~a~~~ 144 (325)
.-.+.|-|.||.+|+.++...
T Consensus 28 ~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 28 FDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp -SEEEEECCHHHHHHHHHTC-
T ss_pred ccEEEEcChhhhhHHHHHhCC
Confidence 568999999999998888763
No 349
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=25.11 E-value=89 Score=25.01 Aligned_cols=69 Identities=13% Similarity=0.090 Sum_probs=44.6
Q ss_pred CceEEEecCCCCCCC--ChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHhC
Q 020518 44 TSTAFVLHGLLGSGR--NWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAA-NDLANLVKAKG 120 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~-~~l~~~l~~~~ 120 (325)
.|.||++.|+.++.- .-..+...|.. +|++|.++.-| +-++.. .-+-.+-.++-
T Consensus 30 ~~vlIv~eG~DaAGKg~~I~~l~~~lDP--------Rg~~v~~~~~p---------------t~eE~~~p~lwRfw~~lP 86 (230)
T TIGR03707 30 ARVVIVFEGRDAAGKGGTIKRITEHLNP--------RGARVVALPKP---------------SDRERTQWYFQRYVQHLP 86 (230)
T ss_pred CCEEEEEeCCCCCCchHHHHHHHHhcCC--------CeeEEEeCCCC---------------CHHHHcChHHHHHHHhCC
Confidence 689999999977664 23445555554 78888887544 222222 23566667776
Q ss_pred CCCCEEEEEeChhHH
Q 020518 121 WDWPDVVIGHSMGGK 135 (325)
Q Consensus 121 ~~~~~~lvGhS~Gg~ 135 (325)
..+.+.++=-||=+-
T Consensus 87 ~~G~i~IF~rSwY~~ 101 (230)
T TIGR03707 87 AAGEIVLFDRSWYNR 101 (230)
T ss_pred CCCeEEEEeCchhhh
Confidence 656888888887444
No 350
>COG4021 Uncharacterized conserved protein [Function unknown]
Probab=24.83 E-value=2.1e+02 Score=22.49 Aligned_cols=53 Identities=19% Similarity=0.214 Sum_probs=35.5
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCCCEEEEEeC
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHD---IANAANDLANLVKAKGWDWPDVVIGHS 131 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~---~~~~~~~l~~~l~~~~~~~~~~lvGhS 131 (325)
.-|-|+.+|-+|+-.-...-++..+|+ .+.|++....++.+.+.+ .+.+.|.|
T Consensus 20 ~t~iVlRiDGr~Fhk~tk~l~FeKPyD~~f~~lM~~tA~~lv~~~~~~-i~LaYtfS 75 (249)
T COG4021 20 QTYIVLRIDGRGFHKFTKFLDFEKPYDERFLKLMNATAKNLVLKYGLD-IILAYTFS 75 (249)
T ss_pred CceEEEEecChhhhHHHhhcCcCCcchHHHHHHHHHHHHHHHHHhCCC-eEEEEecc
Confidence 567899999998866554443334443 445566666788888877 66666665
No 351
>PRK07313 phosphopantothenoylcysteine decarboxylase; Validated
Probab=24.80 E-value=2.5e+02 Score=21.51 Aligned_cols=61 Identities=11% Similarity=0.082 Sum_probs=36.5
Q ss_pred CceEEEecCCCC---CCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCC---CCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 020518 44 TSTAFVLHGLLG---SGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNH---GRSAEIEGLDPPHDIANAANDLANLVK 117 (325)
Q Consensus 44 ~~~vv~~HG~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~---G~S~~~~~~~~~~~~~~~~~~l~~~l~ 117 (325)
+.+||+++-+.. ....+..-+..|.+ .|+.|+-+. +|+ |..... ...+++++++.+..++.
T Consensus 113 ~~pvvi~Pamn~~m~~~p~~~~Nl~~L~~--------~G~~vi~p~-~g~la~~~~g~g----~~~~~~~i~~~v~~~~~ 179 (182)
T PRK07313 113 TTPKLIAPAMNTKMYENPATQRNLKTLKE--------DGVQEIEPK-EGLLACGDEGYG----ALADIETILETIENTLK 179 (182)
T ss_pred CCCEEEEECCCHHHhcCHHHHHHHHHHHH--------CCCEEECCC-CCccccCCccCC----CCCCHHHHHHHHHHHhc
Confidence 567777775322 22233455666776 788877766 444 333221 45678888888777664
No 352
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=24.16 E-value=1e+02 Score=17.65 Aligned_cols=28 Identities=11% Similarity=0.049 Sum_probs=23.2
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCEEEEE
Q 020518 101 PPHDIANAANDLANLVKAKGWDWPDVVIG 129 (325)
Q Consensus 101 ~~~~~~~~~~~l~~~l~~~~~~~~~~lvG 129 (325)
...+.+.+..|+...|.++.+. .+.++|
T Consensus 4 ~~w~PqSWM~DLrS~I~~~~I~-ql~ipG 31 (51)
T PF03490_consen 4 TAWHPQSWMSDLRSSIGEMAIT-QLFIPG 31 (51)
T ss_pred cccCcHHHHHHHHHHHhcceee-eEEecc
Confidence 3566788999999999999888 777776
No 353
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=24.13 E-value=4.5e+02 Score=23.50 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEE
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVL 162 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli 162 (325)
=+++.+.+.++-+.+.++ .+.+|--+|=|.-|...|..+-+. ..+.++|+-
T Consensus 197 de~Lm~El~~Ik~~~~P~-E~llVvDam~GQdA~~~A~aF~e~------l~itGvIlT 247 (451)
T COG0541 197 DEELMDELKEIKEVINPD-ETLLVVDAMIGQDAVNTAKAFNEA------LGITGVILT 247 (451)
T ss_pred cHHHHHHHHHHHhhcCCC-eEEEEEecccchHHHHHHHHHhhh------cCCceEEEE
Confidence 356777888888888888 999999999999999999988772 257787773
No 354
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=23.92 E-value=2.2e+02 Score=22.13 Aligned_cols=40 Identities=20% Similarity=0.270 Sum_probs=30.7
Q ss_pred HHHHHhCCCCCEEEEEeC-hhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 114 NLVKAKGWDWPDVVIGHS-MGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 114 ~~l~~~~~~~~~~lvGhS-~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
+..+.+... ++.++|-. +|+.++..++.. -|..++++|.-
T Consensus 14 ~~q~~L~~~-~V~IvG~GglGs~ia~~La~~-----------Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQA-TVAICGLGGLGSNVAINLARA-----------GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCC-cEEEECcCHHHHHHHHHHHHc-----------CCCEEEEECCC
Confidence 345566666 89999877 788888888865 58889999865
No 355
>TIGR00246 tRNA_RlmH_YbeA rRNA large subunit m3Psi methyltransferase RlmH. This protein, in the SPOUT methyltransferase family, previously designated YbeA in E. coli, was shown to be responsible for a further modification, a methylation, to a pseudouridine base in ribosomal large subunit RNA.
Probab=23.90 E-value=1.7e+02 Score=21.66 Aligned_cols=41 Identities=22% Similarity=0.318 Sum_probs=23.5
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 81 RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 81 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
.+|++|-+| ...+-.++++.+..+...- .+ -+.+||-+.|=
T Consensus 67 ~~i~LDe~G-----------k~~sS~~fA~~l~~~~~~g-~~-i~FvIGGa~G~ 107 (153)
T TIGR00246 67 HVVTLDIPG-----------KPWTTPQLADTLEKWKTDG-RD-VTLLIGGPEGL 107 (153)
T ss_pred eEEEEcCCC-----------CcCCHHHHHHHHHHHhccC-Ce-EEEEEcCCCcC
Confidence 567777664 3445556666666664332 23 55666766663
No 356
>PRK04148 hypothetical protein; Provisional
Probab=23.88 E-value=1.3e+02 Score=21.63 Aligned_cols=35 Identities=20% Similarity=0.040 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~ 142 (325)
++++.+.+.+...... ++..||-..|..+|..++.
T Consensus 3 ~i~~~l~~~~~~~~~~-kileIG~GfG~~vA~~L~~ 37 (134)
T PRK04148 3 TIAEFIAENYEKGKNK-KIVELGIGFYFKVAKKLKE 37 (134)
T ss_pred HHHHHHHHhcccccCC-EEEEEEecCCHHHHHHHHH
Confidence 3444444433332223 6999999999888888884
No 357
>COG1582 FlgEa Uncharacterized protein, possibly involved in motility [Cell motility and secretion]
Probab=23.69 E-value=1.7e+02 Score=17.82 Aligned_cols=30 Identities=3% Similarity=0.162 Sum_probs=23.1
Q ss_pred eeEEEecCCCccccccChHHHHHHHHHHHhc
Q 020518 294 VSVHVLPNAGHWVHVDNPKGLLEIVAPRIAS 324 (325)
Q Consensus 294 ~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 324 (325)
.+...+.| .-++.-|.-++|.+.|.+|-++
T Consensus 28 ttItLinG-kkyvVkEsveEVi~kI~~y~rk 57 (67)
T COG1582 28 TTITLING-KKYVVKESVEEVINKIIEYRRK 57 (67)
T ss_pred cEEEEEcC-cEEEEcccHHHHHHHHHHHHHH
Confidence 66666665 6777778889999999888764
No 358
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=23.53 E-value=1.1e+02 Score=21.36 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhHHHH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGGKVA 137 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a 137 (325)
+....+.-.+..++.+ .++++||+--|++.
T Consensus 44 ~~~~sl~~av~~l~v~-~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVK-HIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCC-EEEEEccCCCcHHH
Confidence 4566677778889999 99999998655544
No 359
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=23.18 E-value=2.4e+02 Score=23.22 Aligned_cols=50 Identities=8% Similarity=0.116 Sum_probs=30.8
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCccccc-cChHHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHWVHV-DNPKGLLEIVAP 320 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~-e~p~~~~~~i~~ 320 (325)
++|++++.|++ ...++..++.+. ++++.++. .|++.-. -.|++..+.|.+
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~P~--------~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 147 GVPVVLVAGDS------ELEKEVKEETPW--------AVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCC--------ceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 38999998875 333445556655 78777765 4644333 346666665554
No 360
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=23.16 E-value=1.3e+02 Score=26.24 Aligned_cols=19 Identities=26% Similarity=0.260 Sum_probs=16.8
Q ss_pred EEEEEeChhHHHHHHHHHH
Q 020518 125 DVVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 125 ~~lvGhS~Gg~~a~~~a~~ 143 (325)
-.++|-|.|+.++..++..
T Consensus 46 d~IaGtSAGALvAAl~asG 64 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCG 64 (382)
T ss_pred CeEEEEcHHHHHHHHHHhC
Confidence 4699999999999999875
No 361
>PRK01581 speE spermidine synthase; Validated
Probab=23.12 E-value=5.1e+02 Score=22.63 Aligned_cols=125 Identities=11% Similarity=0.028 Sum_probs=60.9
Q ss_pred ccceEEEEcccCCCCCCCceEEEecCCCCCCCChHHHHHHHHhhhhccC-----CCCceEEEEeCCCCCCCCCCCCCCCC
Q 020518 27 LQTLAYEEVRSSSDRPYTSTAFVLHGLLGSGRNWRSFSRNLASTLSQTS-----ASSEWRMVLVDLRNHGRSAEIEGLDP 101 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~~~~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~-----~~~~~~vi~~D~~G~G~S~~~~~~~~ 101 (325)
.+.|.|.+.... +......+++++--.++.+.|..........- ..+ .++-=++..++.++++..-...-...
T Consensus 52 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~vl~~~~S~yQ~I~I~et~~~~L~LDG~~Q~s 129 (374)
T PRK01581 52 DRGIQYAETKQD-NQVQSENVVIVPTDSHNLDIWDEISLKEIQAG-EHTNLFAEKSNYQNINLLQVSDIRLYLDKQLQFS 129 (374)
T ss_pred ccCceeccCCcc-chhhccceEEeecCCCchhhhhHHHHHHHhhc-ccCEEEecCCCCceEEEEEcCCEEEEECCeeccc
Confidence 455667665442 22334567777777777777776544333100 000 00111455566665532111000001
Q ss_pred CCCHHHHHHHHHHH--HHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEecC
Q 020518 102 PHDIANAANDLANL--VKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLDSV 165 (325)
Q Consensus 102 ~~~~~~~~~~l~~~--l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~~~ 165 (325)
..+-.-+-+.+... +.....+ ++.++|-..|+ ++..+.+++. +..+++++-.
T Consensus 130 e~DE~iYHE~Lvhp~m~~h~~Pk-rVLIIGgGdG~--tlrelLk~~~---------v~~It~VEID 183 (374)
T PRK01581 130 SVDEQIYHEALVHPIMSKVIDPK-RVLILGGGDGL--ALREVLKYET---------VLHVDLVDLD 183 (374)
T ss_pred cccHHHHHHHHHHHHHHhCCCCC-EEEEECCCHHH--HHHHHHhcCC---------CCeEEEEeCC
Confidence 11111233444442 2334556 89999977666 4455556763 7788887754
No 362
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.77 E-value=2.4e+02 Score=23.16 Aligned_cols=52 Identities=10% Similarity=0.111 Sum_probs=32.2
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCccccccChHHHHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHWVHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~e~p~~~~~~i~~fl 322 (325)
++|++++.|++ ...++..++.+. ++.+.++. .|.....-.|++..+.|.+=.
T Consensus 147 gVPV~lvsGD~------~~~~ea~~~~P~--------~~tv~vK~~~g~aa~~~~p~~a~~~I~~~~ 199 (263)
T cd08770 147 GVPVVFVSGDA------GLCAEAKELNPN--------IVTVPVKEGFGGATISIHPGLACKEIRKGV 199 (263)
T ss_pred CCCEEEEecCH------HHHHHHHHhCCC--------ceEEEeeeeeccccccCCHHHHHHHHHHHH
Confidence 38999998874 233444556665 77777765 343332336777777776544
No 363
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=22.55 E-value=81 Score=25.78 Aligned_cols=36 Identities=19% Similarity=0.191 Sum_probs=25.5
Q ss_pred HHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccc
Q 020518 110 NDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCAR 146 (325)
Q Consensus 110 ~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~ 146 (325)
.-|.++++..... =--++|.|+|+.-+..|.++.+.
T Consensus 28 GVLD~fl~a~~~~-f~~~~GvSAGA~n~~aYls~Q~g 63 (292)
T COG4667 28 GVLDEFLRANFNP-FDLVVGVSAGALNLVAYLSKQRG 63 (292)
T ss_pred HHHHHHHHhccCC-cCeeeeecHhHHhHHHHhhcCCc
Confidence 3345556443332 23578999999999999998887
No 364
>PF15566 Imm18: Immunity protein 18
Probab=22.48 E-value=1.2e+02 Score=17.68 Aligned_cols=30 Identities=20% Similarity=0.402 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEeChhHH
Q 020518 105 IANAANDLANLVKAKGWDWPDVVIGHSMGGK 135 (325)
Q Consensus 105 ~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~ 135 (325)
+.-++++|..+......+ .++++--||||.
T Consensus 4 L~~L~~~l~~L~~~~~~~-H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFD-HEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHHHHHhccCCC-Cceecccccccc
Confidence 456677777777776666 899999999986
No 365
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=22.47 E-value=1.3e+02 Score=21.92 Aligned_cols=27 Identities=30% Similarity=0.238 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHhCCCCCEEEEEeChhH
Q 020518 107 NAANDLANLVKAKGWDWPDVVIGHSMGG 134 (325)
Q Consensus 107 ~~~~~l~~~l~~~~~~~~~~lvGhS~Gg 134 (325)
+....+.-.+..++.+ .++++||+-=|
T Consensus 41 ~~~~sl~~av~~l~~~-~IiV~gHt~Cg 67 (142)
T cd03379 41 DAIRSLVVSVYLLGTR-EIIVIHHTDCG 67 (142)
T ss_pred hHHHHHHHHHHHhCCC-EEEEEeecCCc
Confidence 4566677777889999 99999998533
No 366
>PF04244 DPRP: Deoxyribodipyrimidine photo-lyase-related protein; InterPro: IPR007357 This family appears to be related to DNA photolyases.; PDB: 3ZXS_A.
Probab=22.20 E-value=2.3e+02 Score=22.57 Aligned_cols=47 Identities=26% Similarity=0.448 Sum_probs=25.8
Q ss_pred HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEE
Q 020518 61 RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVI 128 (325)
Q Consensus 61 ~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lv 128 (325)
+.++..|.+ +||+|.-+.+. .......+.+.|..++++.+++ .+.++
T Consensus 52 Rhfa~~L~~--------~G~~V~Y~~~~------------~~~~~~s~~~~L~~~~~~~~~~-~~~~~ 98 (224)
T PF04244_consen 52 RHFADELRA--------KGFRVHYIELD------------DPENTQSFEDALARALKQHGID-RLHVM 98 (224)
T ss_dssp HHHHHHHHH--------TT--EEEE-TT-------------TT--SSHHHHHHHHHHHH-----EEEE
T ss_pred HHHHHHHHh--------CCCEEEEEeCC------------CccccccHHHHHHHHHHHcCCC-EEEEE
Confidence 455666666 89999999875 2223335677788888888887 66654
No 367
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=22.12 E-value=5.6e+02 Score=22.77 Aligned_cols=60 Identities=10% Similarity=0.146 Sum_probs=45.1
Q ss_pred HHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHH
Q 020518 61 RSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHF 140 (325)
Q Consensus 61 ~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~ 140 (325)
+.++..|.+ .|.+|++. ...+.+++-..+...++..+.+ |.+++ +-||.++..+
T Consensus 75 d~vaa~l~~--------~gi~v~a~---------------~~~~~~~y~~~~~~~l~~~~~~-p~~i~--DdGg~~~~~~ 128 (413)
T cd00401 75 DHAAAAIAA--------AGIPVFAW---------------KGETLEEYWWCIEQALKFPDGE-PNMIL--DDGGDLTLLI 128 (413)
T ss_pred HHHHHHHHh--------cCceEEEE---------------cCCCHHHHHHHHHHHHhccCCC-CcEEE--ecchHHHHHH
Confidence 567777776 78888887 3556778877888888765545 65665 8899999888
Q ss_pred HHHccc
Q 020518 141 AQSCAR 146 (325)
Q Consensus 141 a~~~p~ 146 (325)
...+|+
T Consensus 129 ~~~~~~ 134 (413)
T cd00401 129 HKKHPE 134 (413)
T ss_pred Hhhhhh
Confidence 887776
No 368
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.02 E-value=2.8e+02 Score=22.84 Aligned_cols=52 Identities=12% Similarity=0.236 Sum_probs=31.8
Q ss_pred CCcEEEEeeCCCCCCChHHHHHHHHHhhhcCCCCCCceeEEEecC-CCcc-ccccChHHHHHHHHHHH
Q 020518 257 GMEIAIVRAEKSDRWDPDVIQRLEGLANRQGDGSEGKVSVHVLPN-AGHW-VHVDNPKGLLEIVAPRI 322 (325)
Q Consensus 257 ~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gH~-~~~e~p~~~~~~i~~fl 322 (325)
++|++++.|++ ...++..++.+. ++.+.++. .|.+ ...-.|++..+.|.+=.
T Consensus 147 gVPV~lVsGDd------~~~~ea~~~~p~--------i~tv~vK~~~gr~aa~~~~p~~a~~~I~~~a 200 (266)
T cd08663 147 GVPVVLVTGDD------AACAEARELGPG--------VETVAVKEAIGRFAARCLPPAEARALIREAA 200 (266)
T ss_pred CCCEEEEecCH------HHHHHHHhhCCC--------cEEEEEecccCCCccccCCHHHHHHHHHHHH
Confidence 38999998874 233444555655 77777765 3533 33345777777766543
No 369
>PRK14456 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=21.87 E-value=3.8e+02 Score=23.35 Aligned_cols=76 Identities=12% Similarity=0.115 Sum_probs=47.6
Q ss_pred EEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEE
Q 020518 47 AFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDV 126 (325)
Q Consensus 47 vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 126 (325)
.+++.|+..+......+++.+.... ...+.|-+..- +.+.. ...-.+..+.+.+.+...|+. +
T Consensus 283 yvLI~GvNDs~eda~~L~~~l~~~~------~~VnlIpyn~~--~~~~~------~~ps~e~i~~F~~~L~~~Gi~---v 345 (368)
T PRK14456 283 YMLLEGINDSPEDARKLIRFASRFF------CKINLIDYNSI--VNIKF------EPVCSSTRERFRDRLLDAGLQ---V 345 (368)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhcCC------CeeEEeeeccC--CCCCC------CCCCHHHHHHHHHHHHHCCCc---E
Confidence 5789999887777777777666421 24455554432 22211 122345566778888887766 7
Q ss_pred EEEeChhHHHHHH
Q 020518 127 VIGHSMGGKVALH 139 (325)
Q Consensus 127 lvGhS~Gg~~a~~ 139 (325)
.+..|.|.-+...
T Consensus 346 tvR~~~G~di~aA 358 (368)
T PRK14456 346 TVRKSYGTTINAA 358 (368)
T ss_pred EeeCCCCcchhhc
Confidence 8889999765443
No 370
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=21.78 E-value=5.8e+02 Score=22.80 Aligned_cols=67 Identities=15% Similarity=0.145 Sum_probs=41.0
Q ss_pred CceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcc
Q 020518 78 SEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPK 157 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~ 157 (325)
.+|.++.+|-+|....+ +...+.+..+.+.+..+ .+++|--++-|.-+...|..+-+. ..+.
T Consensus 181 ~~~DvVIIDTaGr~~~d-----------~~l~~eL~~i~~~~~p~-e~lLVvda~tgq~~~~~a~~f~~~------v~i~ 242 (428)
T TIGR00959 181 NGFDVVIVDTAGRLQID-----------EELMEELAAIKEILNPD-EILLVVDAMTGQDAVNTAKTFNER------LGLT 242 (428)
T ss_pred cCCCEEEEeCCCccccC-----------HHHHHHHHHHHHhhCCc-eEEEEEeccchHHHHHHHHHHHhh------CCCC
Confidence 67889999988764321 24555566666666666 667666666666666666655431 1456
Q ss_pred eEEEE
Q 020518 158 QLWVL 162 (325)
Q Consensus 158 ~lvli 162 (325)
++|+-
T Consensus 243 giIlT 247 (428)
T TIGR00959 243 GVVLT 247 (428)
T ss_pred EEEEe
Confidence 66653
No 371
>cd06292 PBP1_LacI_like_10 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=21.64 E-value=4.2e+02 Score=21.15 Aligned_cols=74 Identities=18% Similarity=0.001 Sum_probs=36.4
Q ss_pred eEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCE
Q 020518 46 TAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPD 125 (325)
Q Consensus 46 ~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 125 (325)
.||+++............+..+.+ .|..|+.+|..-.+....+. -..+....+..+...+-..|.. ++
T Consensus 58 giIi~~~~~~~~~~~~~~i~~~~~--------~~ipvV~i~~~~~~~~~~~~---V~~d~~~~~~~~~~~l~~~g~~-~i 125 (273)
T cd06292 58 GVVFISSLHADTHADHSHYERLAE--------RGLPVVLVNGRAPPPLKVPH---VSTDDALAMRLAVRHLVALGHR-RI 125 (273)
T ss_pred EEEEeCCCCCcccchhHHHHHHHh--------CCCCEEEEcCCCCCCCCCCE---EEECcHHHHHHHHHHHHHCCCc-eE
Confidence 355554333332233344555554 78899998854322111111 2234444555555555455655 66
Q ss_pred EEEEeC
Q 020518 126 VVIGHS 131 (325)
Q Consensus 126 ~lvGhS 131 (325)
.+++..
T Consensus 126 ~~i~~~ 131 (273)
T cd06292 126 GFASGP 131 (273)
T ss_pred EEEeCC
Confidence 666543
No 372
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=21.45 E-value=3.5e+02 Score=20.16 Aligned_cols=48 Identities=10% Similarity=0.031 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHh--CCCCCEEEEEeChhHHHHHHHHHHccccccCCccCCcceEEEEe
Q 020518 107 NAANDLANLVKAK--GWDWPDVVIGHSMGGKVALHFAQSCARADYGQFVALPKQLWVLD 163 (325)
Q Consensus 107 ~~~~~l~~~l~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~~~~~~~~~v~~lvli~ 163 (325)
+..+.+.++++.+ .-+ ++.+.|-|..|.+.+.++...++ .+..++=.+
T Consensus 52 ~~~~~l~~~L~~~~~~gk-~I~~yGA~~kg~tlln~~g~~~~--------~I~~vvD~n 101 (160)
T PF08484_consen 52 QSKAELREFLEKLKAEGK-RIAGYGAGAKGNTLLNYFGLDND--------LIDYVVDDN 101 (160)
T ss_dssp HHHHHHHHHHHHHHHTT---EEEE---SHHHHHHHHHT--TT--------TS--EEES-
T ss_pred HHHHHHHHHHHHHHHcCC-EEEEECcchHHHHHHHHhCCCcc--------eeEEEEeCC
Confidence 3444455555444 224 79999999999999998876565 566555433
No 373
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=21.35 E-value=3.9e+02 Score=22.97 Aligned_cols=75 Identities=15% Similarity=0.261 Sum_probs=45.1
Q ss_pred EEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEE
Q 020518 48 FVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVV 127 (325)
Q Consensus 48 v~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l 127 (325)
++++|+..+.++...++..+.... ...+++-++..| .+.. ...+ ++..+.+.+++...++. +.
T Consensus 257 ~LI~gvNDs~eda~~La~llk~l~------~~VnLiPyn~~~--~~~~-----~~ps-~e~l~~f~~~l~~~gi~---v~ 319 (342)
T PRK14454 257 ALVKGVNDSKEDAKELGKLLKGML------CHVNLIPVNEVK--ENGF-----KKSS-KEKIKKFKNILKKNGIE---TT 319 (342)
T ss_pred EeECCCCCCHHHHHHHHHHHhcCC------ceEEEEecCCCC--CCCC-----CCCC-HHHHHHHHHHHHHCCCc---EE
Confidence 599999998888888777666421 234444444433 2222 1222 34556677777777765 45
Q ss_pred EEeChhHHHHHH
Q 020518 128 IGHSMGGKVALH 139 (325)
Q Consensus 128 vGhS~Gg~~a~~ 139 (325)
+..|.|.-+...
T Consensus 320 iR~~~G~di~aa 331 (342)
T PRK14454 320 IRREMGSDINAA 331 (342)
T ss_pred EeCCCCCchhhc
Confidence 678888665443
No 374
>PRK03363 fixB putative electron transfer flavoprotein FixB; Provisional
Probab=21.18 E-value=2.7e+02 Score=23.56 Aligned_cols=53 Identities=15% Similarity=0.158 Sum_probs=40.1
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeCh-hHHHHHHHHHHcc
Q 020518 81 RMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWDWPDVVIGHSM-GGKVALHFAQSCA 145 (325)
Q Consensus 81 ~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~-Gg~~a~~~a~~~p 145 (325)
+|+..|.+. ..|+.+.+++.+.+++++.++. .++|+|+|. |--++-++|.+..
T Consensus 51 ~V~~~~~~~-----------~~~~~e~~~~al~~~i~~~~p~-~~vl~~~T~~Gr~laprlAa~l~ 104 (313)
T PRK03363 51 HVWKLSGKP-----------DDRMIEDYAGVMADTIRQHGAD-GLVLLPNTRRGKLLAAKLGYRLK 104 (313)
T ss_pred EEEEecCcc-----------cccChHHHHHHHHHHHHhhCCC-cEEEEcCCccHHHHHHHHHHHhC
Confidence 677777541 2377789999999999987754 589999885 7778888887754
No 375
>KOG4231 consensus Intracellular membrane-bound Ca2+-independent phospholipase A2 [Lipid transport and metabolism]
Probab=21.15 E-value=1.4e+02 Score=27.10 Aligned_cols=19 Identities=26% Similarity=0.473 Sum_probs=16.2
Q ss_pred EEEEeChhHHHHHHHHHHc
Q 020518 126 VVIGHSMGGKVALHFAQSC 144 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~~ 144 (325)
.++|.|.||++|..+....
T Consensus 453 ~ICGvSTG~ilA~~Lg~k~ 471 (763)
T KOG4231|consen 453 LICGVSTGGILAIALGVKL 471 (763)
T ss_pred HHhccCchHHHHHHHHhcC
Confidence 5889999999999987653
No 376
>PRK06849 hypothetical protein; Provisional
Probab=20.95 E-value=3.3e+02 Score=23.68 Aligned_cols=62 Identities=16% Similarity=0.179 Sum_probs=39.4
Q ss_pred hHHHHHHHHhhhhccCCCCceEEEEeCCCCCCCCC---CCCC----CCCCCCHHHHHHHHHHHHHHhCCCCCEEEEEeC
Q 020518 60 WRSFSRNLASTLSQTSASSEWRMVLVDLRNHGRSA---EIEG----LDPPHDIANAANDLANLVKAKGWDWPDVVIGHS 131 (325)
Q Consensus 60 ~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~---~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS 131 (325)
-..+++.|.+ .|++|++.|......+. .... .....+.+++.+.+.+++++.+++ +++-+.+
T Consensus 17 ~l~iar~l~~--------~G~~Vi~~d~~~~~~~~~s~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id--~vIP~~e 85 (389)
T PRK06849 17 ALELARLFHN--------AGHTVILADSLKYPLSRFSRAVDGFYTIPSPRWDPDAYIQALLSIVQRENID--LLIPTCE 85 (389)
T ss_pred HHHHHHHHHH--------CCCEEEEEeCCchHHHHHHHhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCC--EEEECCh
Confidence 3567778887 89999999877543221 1100 002345678899999999988754 4444444
No 377
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=20.95 E-value=3.2e+02 Score=24.04 Aligned_cols=18 Identities=17% Similarity=0.477 Sum_probs=16.2
Q ss_pred CceEEEEeCCCCCCCCCC
Q 020518 78 SEWRMVLVDLRNHGRSAE 95 (325)
Q Consensus 78 ~~~~vi~~D~~G~G~S~~ 95 (325)
..|.||.+|.|.+++|..
T Consensus 289 ~~fDlIilDPPsF~r~k~ 306 (393)
T COG1092 289 EKFDLIILDPPSFARSKK 306 (393)
T ss_pred CcccEEEECCcccccCcc
Confidence 479999999999999976
No 378
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=20.85 E-value=2.5e+02 Score=21.52 Aligned_cols=40 Identities=15% Similarity=0.099 Sum_probs=20.9
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCCHH----HHHHHHHHHHHHhCCC
Q 020518 82 MVLVDLRNHGRSAEIEGLDPPHDIA----NAANDLANLVKAKGWD 122 (325)
Q Consensus 82 vi~~D~~G~G~S~~~~~~~~~~~~~----~~~~~l~~~l~~~~~~ 122 (325)
+|.+| ||||..++-........-. +++..+...|++.|.+
T Consensus 2 ~I~iD-pGHGg~d~GA~~~~g~~E~~~~l~ia~~l~~~L~~~G~~ 45 (189)
T TIGR02883 2 IIVID-PGHGGIDGGAVGKDGTLEKDITLEIALKLKDYLQEQGAL 45 (189)
T ss_pred EEEEe-CCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCE
Confidence 56777 6999876432100112222 3455566666666643
No 379
>KOG2872 consensus Uroporphyrinogen decarboxylase [Coenzyme transport and metabolism]
Probab=20.79 E-value=5.1e+02 Score=21.72 Aligned_cols=73 Identities=21% Similarity=0.227 Sum_probs=45.6
Q ss_pred CceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCCCC--------CCCCCCCCC-CC---CCCCHHHHHHH
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDLRN--------HGRSAEIEG-LD---PPHDIANAAND 111 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~~G--------~G~S~~~~~-~~---~~~~~~~~~~~ 111 (325)
-|-|+|.-|.++ ..+.|+. .||.|+.+|+-= .|..-...+ .+ -.-+.+.+.+.
T Consensus 252 vPmi~fakG~g~-------~Le~l~~--------tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~ 316 (359)
T KOG2872|consen 252 VPMILFAKGSGG-------ALEELAQ--------TGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQL 316 (359)
T ss_pred CceEEEEcCcch-------HHHHHHh--------cCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHH
Confidence 377888888654 3456676 899999998741 121111000 00 12367778888
Q ss_pred HHHHHHHhCCCCCEEEEEeC
Q 020518 112 LANLVKAKGWDWPDVVIGHS 131 (325)
Q Consensus 112 l~~~l~~~~~~~~~~lvGhS 131 (325)
+.+.++..|.++-+.=+||.
T Consensus 317 v~~mv~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 317 VKQMVKDFGKSRYIANLGHG 336 (359)
T ss_pred HHHHHHHhCccceEEecCCC
Confidence 89999999977334445764
No 380
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=20.75 E-value=3.3e+02 Score=19.60 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=17.2
Q ss_pred ccceEEEEcccCCCC------CCCceEEEecCCCCC
Q 020518 27 LQTLAYEEVRSSSDR------PYTSTAFVLHGLLGS 56 (325)
Q Consensus 27 ~~~l~y~~~~~~~~~------~~~~~vv~~HG~~~~ 56 (325)
+..+.|+..+..-+. +.-..+||+||-...
T Consensus 34 ~~G~rfR~~~~~lpGkPDiVl~~y~~viFvHGCFWh 69 (150)
T COG3727 34 GQGLRFRVQDKDLPGKPDIVLPKYRCVIFVHGCFWH 69 (150)
T ss_pred hcceEEEecCCCCCCCCCEeecCceEEEEEeeeecc
Confidence 455666665432221 234568999997553
No 381
>cd07216 Pat17_PNPLA8_PNPLA9_like3 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.63 E-value=69 Score=26.89 Aligned_cols=17 Identities=29% Similarity=0.596 Sum_probs=15.2
Q ss_pred EEEEeChhHHHHHHHHH
Q 020518 126 VVIGHSMGGKVALHFAQ 142 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~ 142 (325)
.++|-|.||.+|+.++.
T Consensus 45 li~GTStGgiiA~~l~~ 61 (309)
T cd07216 45 LIGGTSTGGLIAIMLGR 61 (309)
T ss_pred eeeeccHHHHHHHHhcc
Confidence 78899999999998874
No 382
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=20.63 E-value=1.3e+02 Score=23.73 Aligned_cols=30 Identities=23% Similarity=0.085 Sum_probs=22.0
Q ss_pred ceEEEecCCCCCCCChHHHHHHHHhhhhccCCCCceEEEEeCC
Q 020518 45 STAFVLHGLLGSGRNWRSFSRNLASTLSQTSASSEWRMVLVDL 87 (325)
Q Consensus 45 ~~vv~~HG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vi~~D~ 87 (325)
+.=||++|-|-+.. +..|++ +||+|+.+|+
T Consensus 38 ~~rvLvPgCG~g~D-----~~~La~--------~G~~VvGvDl 67 (218)
T PF05724_consen 38 GGRVLVPGCGKGYD-----MLWLAE--------QGHDVVGVDL 67 (218)
T ss_dssp SEEEEETTTTTSCH-----HHHHHH--------TTEEEEEEES
T ss_pred CCeEEEeCCCChHH-----HHHHHH--------CCCeEEEEec
Confidence 34588888776543 345666 8999999997
No 383
>PRK13938 phosphoheptose isomerase; Provisional
Probab=20.29 E-value=3.3e+02 Score=21.11 Aligned_cols=27 Identities=19% Similarity=0.054 Sum_probs=22.3
Q ss_pred hCCCCCEEEEEeChhHHHHHHHHHHcc
Q 020518 119 KGWDWPDVVIGHSMGGKVALHFAQSCA 145 (325)
Q Consensus 119 ~~~~~~~~lvGhS~Gg~~a~~~a~~~p 145 (325)
+.-.++++++|..-.|.+|..++.+..
T Consensus 42 l~~g~rI~i~G~G~S~~~A~~fa~~L~ 68 (196)
T PRK13938 42 YRAGARVFMCGNGGSAADAQHFAAELT 68 (196)
T ss_pred HHCCCEEEEEeCcHHHHHHHHHHHHcC
Confidence 333349999999999999999998864
No 384
>COG0482 TrmU Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain [Translation, ribosomal structure and biogenesis]
Probab=20.27 E-value=3.5e+02 Score=23.41 Aligned_cols=61 Identities=10% Similarity=0.086 Sum_probs=37.0
Q ss_pred CceEEEecCCCCCCCChHHHHH-HHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCC
Q 020518 44 TSTAFVLHGLLGSGRNWRSFSR-NLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDPPHDIANAANDLANLVKAKGWD 122 (325)
Q Consensus 44 ~~~vv~~HG~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 122 (325)
...||.+-|.-.|+ +.. .|.+ +||.|+.+-+.-+..... ..+..++...|...+.+.+|+.
T Consensus 4 ~kV~v~mSGGVDSS-----VaA~lLk~--------QGyeViGl~m~~~~~~~~-----~~C~s~~d~~da~~va~~LGIp 65 (356)
T COG0482 4 KKVLVGMSGGVDSS-----VAAYLLKE--------QGYEVIGLFMKNWDEDGG-----GGCCSEEDLRDAERVADQLGIP 65 (356)
T ss_pred cEEEEEccCCHHHH-----HHHHHHHH--------cCCeEEEEEEEeeccCCC-----CcCCchhHHHHHHHHHHHhCCc
Confidence 44566666654433 333 3444 899999998887765111 3455566666666666666653
No 385
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=20.11 E-value=4.5e+02 Score=23.29 Aligned_cols=76 Identities=16% Similarity=0.100 Sum_probs=48.9
Q ss_pred HHHHHHHhhhhccCCCCceEEEEeCCCCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHhCCCCCEEEEEeChhHHHHH
Q 020518 62 SFSRNLASTLSQTSASSEWRMVLVDLRNHGRSAEIEGLDP---PHDIANAANDLANLVKAKGWDWPDVVIGHSMGGKVAL 138 (325)
Q Consensus 62 ~~~~~l~~~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~---~~~~~~~~~~l~~~l~~~~~~~~~~lvGhS~Gg~~a~ 138 (325)
...+.+.+ .+.-|+-+|..++-.--...+.+- .+.++.+++++......-... ..+|.|---||..++
T Consensus 66 s~a~al~~--------~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr-~PVl~g~g~Gg~~A~ 136 (456)
T COG3946 66 SRADALLA--------RGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYR-LPVLTGPGQGGTLAY 136 (456)
T ss_pred chhHHHhh--------cCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcc-cceEeecCCCcHHHH
Confidence 44555555 778888888887643322221112 335666666665555443334 567889999999999
Q ss_pred HHHHHccc
Q 020518 139 HFAQSCAR 146 (325)
Q Consensus 139 ~~a~~~p~ 146 (325)
..+++.|+
T Consensus 137 asaaqSp~ 144 (456)
T COG3946 137 ASAAQSPD 144 (456)
T ss_pred HHHhhChh
Confidence 99999887
No 386
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.10 E-value=80 Score=25.62 Aligned_cols=18 Identities=39% Similarity=0.637 Sum_probs=16.4
Q ss_pred EEEEeChhHHHHHHHHHH
Q 020518 126 VVIGHSMGGKVALHFAQS 143 (325)
Q Consensus 126 ~lvGhS~Gg~~a~~~a~~ 143 (325)
.++|-|.||.+|+.++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 688999999999999976
Done!