BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020520
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CAF5|AB6I_ARATH ABC transporter I family member 6, chloroplastic OS=Arabidopsis
thaliana GN=ABCI6 PE=1 SV=1
Length = 338
Score = 427 bits (1099), Expect = e-119, Method: Compositional matrix adjust.
Identities = 208/257 (80%), Positives = 237/257 (92%)
Query: 68 DGQDEKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG 127
D D PLL+V L AVIAES+QEILKGVNL+V EGEVHA+MGKNGSGKST SKVLVG
Sbjct: 82 DRDDVGRIPLLEVRDLRAVIAESRQEILKGVNLVVYEGEVHAVMGKNGSGKSTFSKVLVG 141
Query: 128 HPDYEVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRK 187
HPDYEVT GS+VFKG+NLL+MEPE+RSLAGLFMSFQSPVEIPGV+N+DFL+MA+NAR+RK
Sbjct: 142 HPDYEVTGGSIVFKGQNLLDMEPEDRSLAGLFMSFQSPVEIPGVSNMDFLNMAFNARKRK 201
Query: 188 LGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAIL 247
LGQPE+ PI+FY++L KLE ++MKTDFLNRNVNEGFSGGERKRNEILQLAVLGA+LAIL
Sbjct: 202 LGQPELDPIQFYSHLVSKLEVVNMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAELAIL 261
Query: 248 DEIDSGLDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
DEIDSGLDVDAL+DVAKAVNGLLTPKNS+LMITHY+RLL++IKPT IHIME+GRIIKTGD
Sbjct: 262 DEIDSGLDVDALQDVAKAVNGLLTPKNSVLMITHYQRLLDYIKPTLIHIMENGRIIKTGD 321
Query: 308 ASIATVLEEGGYKAISG 324
S+A +LE+ GYKAISG
Sbjct: 322 NSLAKLLEKEGYKAISG 338
>sp|P48255|ABCX_CYAPA Probable ATP-dependent transporter ycf16 OS=Cyanophora paradoxa
GN=ycf16 PE=3 SV=1
Length = 259
Score = 300 bits (768), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 147/252 (58%), Positives = 195/252 (77%), Gaps = 3/252 (1%)
Query: 72 EKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDY 131
EK++ +L+V L A + + EILKGVNL +N GE+HAIMG NGSGKST SK+L GHP Y
Sbjct: 4 EKTK-ILEVKNLKAQVDGT--EILKGVNLTINSGEIHAIMGPNGSGKSTFSKILAGHPAY 60
Query: 132 EVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQP 191
+VT G ++FK +NLLE+EPEER+ AG+F++FQ P+EI GV+NIDFL +AYN RR++ G
Sbjct: 61 QVTGGEILFKNKNLLELEPEERARAGVFLAFQYPIEIAGVSNIDFLRLAYNNRRKEEGLT 120
Query: 192 EIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEID 251
E+ P+ FY+ + KL + M FLNRNVNEGFSGGE+KRNEILQ+A+L LAILDE D
Sbjct: 121 ELDPLTFYSIVKEKLNVVKMDPHFLNRNVNEGFSGGEKKRNEILQMALLNPSLAILDETD 180
Query: 252 SGLDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIA 311
SGLD+DALR VA+ VN L +NS+++ITHY+RLL++I P +IH+M++GRI+KTG A +A
Sbjct: 181 SGLDIDALRIVAEGVNQLSNKENSIILITHYQRLLDYIVPDYIHVMQNGRILKTGGAELA 240
Query: 312 TVLEEGGYKAIS 323
LE GY ++
Sbjct: 241 KELEIKGYDWLN 252
>sp|O78474|ABCX_GUITH Probable ATP-dependent transporter ycf16 OS=Guillardia theta
GN=ycf16 PE=3 SV=1
Length = 253
Score = 295 bits (754), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 136/245 (55%), Positives = 188/245 (76%), Gaps = 2/245 (0%)
Query: 75 QPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVT 134
+ +L+VT L A + E K I+KG+NL+VN GE+HAIMGKNGSGKST +K++ GHPDY +T
Sbjct: 3 KKILEVTNLHAAVNEIK--IVKGLNLVVNAGEIHAIMGKNGSGKSTFAKIIAGHPDYTIT 60
Query: 135 EGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIG 194
G + ++ ++LE+ PE+R+ G+F+SFQ P+EIPGV N DFL +A NARR G PE+
Sbjct: 61 NGDITYQHTSILELTPEDRAKRGIFLSFQYPIEIPGVTNADFLRLACNARRIYQGLPEME 120
Query: 195 PIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGL 254
P+EF+ Y+ KL + +K FL R+VNEGFSGGE+KRNEILQ+++L LA+LDE DSGL
Sbjct: 121 PLEFFEYINSKLPLVDLKPSFLTRDVNEGFSGGEKKRNEILQMSILDTKLAVLDETDSGL 180
Query: 255 DVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVL 314
D+DALR VA + L N++++ITHY+RLL++IKP F+H+M++G+IIKTG AS+A L
Sbjct: 181 DIDALRTVANGIKSLANDGNAIILITHYQRLLDYIKPDFVHVMQEGKIIKTGSASLALDL 240
Query: 315 EEGGY 319
E+ GY
Sbjct: 241 EKYGY 245
>sp|Q1XDP6|ABCX_PORYE Probable ATP-dependent transporter ycf16 OS=Porphyra yezoensis
GN=ycf16 PE=3 SV=1
Length = 251
Score = 293 bits (751), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 138/250 (55%), Positives = 190/250 (76%), Gaps = 2/250 (0%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
SQ +L++ L A + E+ ILKGVNL + GE+HAIMG NGSGKSTLSKV+ GHP Y +
Sbjct: 2 SQTILEIKDLYASVGETT--ILKGVNLSIRAGEIHAIMGPNGSGKSTLSKVIAGHPAYSL 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
G ++F G+++LE+EP+ER+ AG+F++FQ PVEIPGV+N DFL +A NARR+ G E
Sbjct: 60 ISGDILFFGQSILEIEPDERAKAGIFLAFQYPVEIPGVSNSDFLRIALNARRKFQGLSEF 119
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
P+EF+ + K++ + M+ FL RNVNEGFSGGE+KRNEILQ+A+L + ++ILDE DSG
Sbjct: 120 SPLEFFQLITEKIDLVGMQESFLTRNVNEGFSGGEKKRNEILQMALLDSKISILDETDSG 179
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATV 313
LD+DALR VAK +N L NS+++ITHY+RLL++I P F+HIM +G+I+KTG ++A
Sbjct: 180 LDIDALRVVAKGINTLAKSTNSIILITHYQRLLDYIIPDFVHIMSNGQIVKTGSVTLAQD 239
Query: 314 LEEGGYKAIS 323
LE+ GY I+
Sbjct: 240 LEKHGYDWIT 249
>sp|P51241|ABCX_PORPU Probable ATP-dependent transporter ycf16 OS=Porphyra purpurea
GN=ycf16 PE=3 SV=1
Length = 251
Score = 288 bits (738), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 137/252 (54%), Positives = 191/252 (75%), Gaps = 2/252 (0%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
S +L++ L A + + ILKGVNL + GE+HAIMG NGSGKSTLSKV+ GHP Y +
Sbjct: 2 SDYILEIKDLHASVNDVP--ILKGVNLSIKPGEIHAIMGPNGSGKSTLSKVIAGHPAYSL 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
G ++F G ++L+MEP+ER+ AG+F++FQ PVEIPGV+N DFL +A NARR+ PE+
Sbjct: 60 LNGDILFYGRSILKMEPDERARAGIFLAFQYPVEIPGVSNADFLRIALNARRKFRELPEL 119
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
P+EF+ + K+ + MK FL+RNVNEGFSGGE+KRNEILQ+A+L ++L+ILDE DSG
Sbjct: 120 SPLEFFQLITEKINLVGMKESFLSRNVNEGFSGGEKKRNEILQMALLESNLSILDETDSG 179
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATV 313
LD+DAL+ +A+ +N L T NS+++ITHY+RLL++I P F+HIM DG+I+KTG+ ++A
Sbjct: 180 LDIDALKIIAQGINTLATSTNSIVLITHYQRLLDYIIPNFVHIMSDGKIVKTGNVNLAQD 239
Query: 314 LEEGGYKAISGS 325
LE+ GY I +
Sbjct: 240 LEKHGYDWIKST 251
>sp|Q55791|Y075_SYNY3 Probable ATP-dependent transporter slr0075 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=slr0075 PE=3 SV=1
Length = 256
Score = 286 bits (732), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/246 (56%), Positives = 186/246 (75%), Gaps = 2/246 (0%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
SQ +L + LTA + +ILKGVNL + GEVHAIMG+NGSGKSTLSKV+ GHPDYE+
Sbjct: 2 SQTILSIKNLTASV--DGNQILKGVNLEIKAGEVHAIMGRNGSGKSTLSKVITGHPDYEI 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
T G ++++G++L +EP ER+LAG+F++FQ P+EIPGV+N+DFL +AYNA+R+ LG E+
Sbjct: 60 TGGEIIYQGQDLSALEPHERALAGIFLAFQYPLEIPGVSNLDFLRIAYNAKRKHLGLEEL 119
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
+F + KL+ + M FL R++NEGFSGGE+KRNEILQ+A+L L+ILDEIDSG
Sbjct: 120 DTFDFEDLIQEKLDVVKMNPAFLERSLNEGFSGGEKKRNEILQMAILEPTLSILDEIDSG 179
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATV 313
LD+DALR V++ VN L P N+ L+ITHY+RLL +I P IH+M DG+I+ +G +A
Sbjct: 180 LDIDALRIVSEGVNFLKNPDNATLVITHYQRLLNYIIPDHIHVMYDGKIVMSGGKELALE 239
Query: 314 LEEGGY 319
LEE GY
Sbjct: 240 LEEKGY 245
>sp|Q00830|ABCX_ODOSI Probable ATP-dependent transporter ycf16 OS=Odontella sinensis
GN=ycf16 PE=3 SV=1
Length = 251
Score = 283 bits (725), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 127/247 (51%), Positives = 190/247 (76%), Gaps = 2/247 (0%)
Query: 76 PLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTE 135
P+L++ L A I E+ EILK +NL +++GE+HAIMG NGSGKST SKVL GHP Y +
Sbjct: 6 PILEIKNLKACINEN--EILKDLNLKIHKGEIHAIMGPNGSGKSTFSKVLAGHPAYNILS 63
Query: 136 GSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGP 195
G ++FKG ++L ++PEERS G+F++FQ P+EIPGV+N DFL +AYN++++ L + E+ P
Sbjct: 64 GDILFKGSSILNLDPEERSHMGIFLAFQYPIEIPGVSNEDFLRLAYNSKQKFLNKDEVDP 123
Query: 196 IEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLD 255
I F+ + KL+ + M FL+RNVNEGFSGGE+KRNEILQ+ +L ++L+ILDE DSGLD
Sbjct: 124 ISFFTIINEKLKLVDMSPVFLSRNVNEGFSGGEKKRNEILQMILLDSELSILDETDSGLD 183
Query: 256 VDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLE 315
+DAL+ ++K +N + ++++ITHY+RLL++++P ++H+M++G+IIKTG A +A LE
Sbjct: 184 IDALKIISKGINTFMNQNKAIILITHYQRLLDYVQPNYVHVMQNGKIIKTGTADLAKELE 243
Query: 316 EGGYKAI 322
GY+ +
Sbjct: 244 SKGYEWL 250
>sp|Q02856|ABCX_ANTSP Probable ATP-dependent transporter ycf16 OS=Antithamnion sp.
GN=ycf16 PE=3 SV=1
Length = 251
Score = 281 bits (720), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 185/243 (76%), Gaps = 2/243 (0%)
Query: 77 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEG 136
LL + L I E+ +IL +NL + GE+HAIMGKNGSGKSTL+KV+ GHP Y++T G
Sbjct: 6 LLNIKNLDVTIGET--QILNSLNLSIKPGEIHAIMGKNGSGKSTLAKVIAGHPSYKITNG 63
Query: 137 SVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPI 196
++F+ +++ E+EPE+RS G+F++FQ PVEIPGV N DFL +AYNA+R + E+ P+
Sbjct: 64 QILFENQDVTEIEPEDRSHLGIFLAFQYPVEIPGVTNADFLRIAYNAKRAFDNKEELDPL 123
Query: 197 EFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDV 256
F++++ K+ + + + FL+RNVNEGFSGGE+K+NEILQ+++L + LAILDE DSGLD+
Sbjct: 124 SFFSFIENKISNIDLNSTFLSRNVNEGFSGGEKKKNEILQMSLLNSKLAILDETDSGLDI 183
Query: 257 DALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEE 316
DAL+ +AK +N L T +NS+++ITHY+RLL++IKP +IH+M+ G II TG + A LE+
Sbjct: 184 DALKTIAKQINSLKTQENSIILITHYQRLLDYIKPDYIHVMQKGEIIYTGGSDTAMKLEK 243
Query: 317 GGY 319
GY
Sbjct: 244 YGY 246
>sp|P35020|ABCX_GALSU Probable ATP-dependent transporter ycf16 OS=Galdieria sulphuraria
GN=ycf16 PE=3 SV=1
Length = 257
Score = 276 bits (707), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 130/254 (51%), Positives = 189/254 (74%), Gaps = 3/254 (1%)
Query: 73 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYE 132
K + LLQ+ L +A +++ IL G+NL VN+GE+HAIMG NGSGKSTLSKV+ GH Y+
Sbjct: 2 KHKSLLQIKNLHVKLANTEEYILNGINLNVNQGEIHAIMGPNGSGKSTLSKVIAGHSLYK 61
Query: 133 VTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPE 192
V +G ++F+ +NLL E+R+ G+F++FQ P+EI GVNNIDFL +AYN++ + +
Sbjct: 62 VVKGEIIFQDQNLLNYTIEDRANLGIFLAFQYPLEIAGVNNIDFLRLAYNSKLKFNQRNP 121
Query: 193 IGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDS 252
+ P++F +YPKL+ + + FL R VNEGFSGGE+K+NEILQ+++L A LAILDE DS
Sbjct: 122 VDPLKFLEIVYPKLKLVGLDESFLYRKVNEGFSGGEKKKNEILQMSLLDAKLAILDETDS 181
Query: 253 GLDVDALRDVAKAVNGLLTP---KNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDAS 309
GLD+DAL+D++ A+ +L K S+++ITHY+R+L +I+P +IH+M G+IIKTGDAS
Sbjct: 182 GLDIDALQDISNAIKSILKMSQFKQSIIIITHYQRILNYIQPDYIHVMYKGKIIKTGDAS 241
Query: 310 IATVLEEGGYKAIS 323
+A LE GY+ ++
Sbjct: 242 LANQLESQGYEWLA 255
>sp|Q9TLX1|ABCX_CYACA Probable ATP-dependent transporter ycf16 OS=Cyanidium caldarium
GN=ycf16 PE=3 SV=1
Length = 254
Score = 251 bits (642), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 122/253 (48%), Positives = 170/253 (67%), Gaps = 2/253 (0%)
Query: 73 KSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYE 132
K +L + L A + E E+L +NL + E H IMG NGSGKS+L KV+ GHP Y+
Sbjct: 2 KETSVLTIQNLKACVNEF--EVLHNINLQIKTNETHVIMGPNGSGKSSLLKVIAGHPSYK 59
Query: 133 VTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPE 192
V EG + + ++ + PEERS G+F+ FQ P+EI GVNN DFL YN +R+K G +
Sbjct: 60 VIEGKIFVENIDITQATPEERSNLGVFLGFQYPIEITGVNNADFLRAVYNQKRKKQGLKD 119
Query: 193 IGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDS 252
+ P+EF L P L+ +SM FL+RN+NEGFSGGE+KRNEILQ+ + LAILDE DS
Sbjct: 120 LDPLEFLEILSPILDLVSMDQTFLHRNLNEGFSGGEKKRNEILQMILSKPRLAILDEPDS 179
Query: 253 GLDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIAT 312
GLD+DALR +++ +N L K +L+ITHY+ LL+++ P +HIM+ G+I++TGD ++A
Sbjct: 180 GLDIDALRSISEVINKLRNQKQCMLIITHYQNLLDYVIPDKVHIMDHGKIVETGDVTLAI 239
Query: 313 VLEEGGYKAISGS 325
L+ GYK I S
Sbjct: 240 QLKRKGYKWIKQS 252
>sp|P77499|SUFC_ECOLI Probable ATP-dependent transporter SufC OS=Escherichia coli (strain
K12) GN=sufC PE=1 SV=1
Length = 248
Score = 249 bits (637), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 124/230 (53%), Positives = 165/230 (71%)
Query: 94 ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEER 153
IL+G++L V+ GEVHAIMG NGSGKSTLS L G DYEVT G+V FKG++LL + PE+R
Sbjct: 16 ILRGLSLDVHPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLALSPEDR 75
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ G+FM+FQ PVEIPGV+N FL A NA R GQ + +F + K+ L M
Sbjct: 76 AGEGIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQETLDRFDFQDLMEEKIALLKMPE 135
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D L R+VN GFSGGE+KRN+ILQ+AVL +L ILDE DSGLD+DAL+ VA VN L K
Sbjct: 136 DLLTRSVNVGFSGGEKKRNDILQMAVLEPELCILDESDSGLDIDALKVVADGVNSLRDGK 195
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
S +++THY+R+L++IKP ++H++ GRI+K+GD ++ LEE GY ++
Sbjct: 196 RSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVKQLEEQGYGWLT 245
>sp|P80866|V296_BACSU Vegetative protein 296 OS=Bacillus subtilis (strain 168) GN=yurY
PE=1 SV=3
Length = 261
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 121/231 (52%), Positives = 161/231 (69%), Gaps = 2/231 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GE HA+MG NG+GKSTLS ++GHP YEVT+GS+ G+++LEME +
Sbjct: 18 KEILKGVNLEIKGGEFHAVMGPNGTGKSTLSAAIMGHPKYEVTKGSITLDGKDVLEMEVD 77
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ AGLF++ Q P EI GV N DFL A NARR + EI ++F + +E L M
Sbjct: 78 ERAQAGLFLAMQYPSEISGVTNADFLRSAINARREE--GDEISLMKFIRKMDENMEFLEM 135
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
+ R +NEGFSGGE+KRNEILQL ++ +AILDEIDSGLD+DAL+ V+K +N + +
Sbjct: 136 DPEMAQRYLNEGFSGGEKKRNEILQLMMIEPKIAILDEIDSGLDIDALKVVSKGINKMRS 195
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAI 322
LMITHY+RLL +I P +H+M GR++K+G A +A LE GY I
Sbjct: 196 ENFGCLMITHYQRLLNYITPDVVHVMMQGRVVKSGGAELAQRLEAEGYDWI 246
>sp|Q8P2M5|Y273_STRP8 Probable ABC transporter ATP-binding protein spyM18_0273
OS=Streptococcus pyogenes serotype M18 (strain MGAS8232)
GN=spyM18_0273 PE=3 SV=1
Length = 256
Score = 234 bits (597), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +
Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVD 75
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ GLF++ Q P EIPG+ N +F+ A NA K + +I +F L K+ L M
Sbjct: 76 ERARLGLFLAMQYPSEIPGITNAEFMRAAMNAD--KADEDKISVRDFITKLDEKMALLGM 133
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
K + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL+ V+K VN +
Sbjct: 134 KEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG 193
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
++ITHY+RLL +I P +H+M DGRI+ +GDA++AT LE+ GY I+
Sbjct: 194 KDFGAMIITHYQRLLNYITPDLVHVMMDGRIVLSGDAALATRLEKEGYAGIA 245
>sp|Q9A1G5|Y285_STRP1 Probable ABC transporter ATP-binding protein SPy_0285/M5005_Spy0242
OS=Streptococcus pyogenes serotype M1 GN=SPy_0285 PE=3
SV=1
Length = 256
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +
Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVD 75
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ GLF++ Q P EIPG+ N +F+ A NA K + +I +F L K+ L M
Sbjct: 76 ERARLGLFLAMQYPSEIPGITNAEFMRAAMNAG--KADEDKISVRDFITKLDEKMALLGM 133
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
K + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL+ V+K VN +
Sbjct: 134 KEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG 193
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
++ITHY+RLL +I P +H+M DGRI+ +GDA++AT LE+ GY I+
Sbjct: 194 KDFGAMIITHYQRLLNYITPDLVHVMMDGRIVLSGDAALATRLEKEGYAGIA 245
>sp|Q5XDV5|Y273_STRP6 Probable ABC transporter ATP-binding protein M6_Spy0273
OS=Streptococcus pyogenes serotype M6 (strain ATCC
BAA-946 / MGAS10394) GN=M6_Spy0273 PE=1 SV=1
Length = 256
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +
Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVD 75
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ GLF++ Q P EIPG+ N +F+ A NA K + +I +F L K+ L M
Sbjct: 76 ERARLGLFLAMQYPSEIPGITNAEFMRAAMNAG--KADEDKISVRDFITKLDEKMALLGM 133
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
K + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL+ V+K VN +
Sbjct: 134 KEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG 193
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
++ITHY+RLL +I P +H+M DGRI+ +GDA++AT LE+ GY I+
Sbjct: 194 KDFGAMIITHYQRLLNYITPDLVHVMMDGRIVLSGDAALATRLEKEGYAGIA 245
>sp|P0CZ43|Y208_STRPQ Probable ABC transporter ATP-binding protein SPs0214
OS=Streptococcus pyogenes serotype M3 (strain SSI-1)
GN=SPs0214 PE=3 SV=1
Length = 256
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +
Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVD 75
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ GLF++ Q P EIPG+ N +F+ A NA K + +I +F L K+ L M
Sbjct: 76 ERARLGLFLAMQYPSEIPGITNAEFMRAAMNAG--KADEDKISVRDFITKLDEKMALLGM 133
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
K + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL+ V+K VN +
Sbjct: 134 KEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG 193
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
++ITHY+RLL +I P +H+M DGRI+ +GDA++AT LE+ GY I+
Sbjct: 194 KDFGAMIITHYQRLLNYITPDLVHVMMDGRIVLSGDAALATRLEKEGYAGIA 245
>sp|P0CZ42|Y208_STRP3 Probable ABC transporter ATP-binding protein SpyM3_0208
OS=Streptococcus pyogenes serotype M3 (strain ATCC
BAA-595 / MGAS315) GN=SpyM3_0208 PE=3 SV=1
Length = 256
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 163/232 (70%), Gaps = 2/232 (0%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
+EILKGVNL + GEV AIMG NG+GKSTLS ++G+P+YEVT+G ++ G N+L++E +
Sbjct: 16 KEILKGVNLTLKTGEVAAIMGPNGTGKSTLSAAIMGNPNYEVTQGQILLDGVNILDLEVD 75
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSM 211
ER+ GLF++ Q P EIPG+ N +F+ A NA K + +I +F L K+ L M
Sbjct: 76 ERARLGLFLAMQYPSEIPGITNAEFMRAAMNAG--KADEDKISVRDFITKLDEKMALLGM 133
Query: 212 KTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLT 271
K + R +NEGFSGGE+KRNEILQL +L A+LDEIDSGLD+DAL+ V+K VN +
Sbjct: 134 KEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG 193
Query: 272 PKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAIS 323
++ITHY+RLL +I P +H+M DGRI+ +GDA++AT LE+ GY I+
Sbjct: 194 KDFGAMIITHYQRLLNYITPDLVHVMMDGRIVLSGDAALATRLEKEGYAGIA 245
>sp|Q60350|Y035_METJA Uncharacterized ABC transporter ATP-binding protein MJ0035
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ0035
PE=3 SV=1
Length = 250
Score = 134 bits (338), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 135/232 (58%), Gaps = 11/232 (4%)
Query: 77 LLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEG 136
LL+V L + +EILKGVNL V E E+HAI+G NG+GKSTL+ ++G Y+ T+G
Sbjct: 6 LLKVEDLH--VYRGNREILKGVNLTVEENEIHAIIGPNGAGKSTLAYTIMGISGYKPTKG 63
Query: 137 SVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPI 196
++FKG ++++ ER+ G+ +++Q P G+ ++L + N + +K EI
Sbjct: 64 RIIFKGVDIIDKNITERARMGMTLAWQEPARFEGIKVKNYLMLGMNEKYKK--DKEIAE- 120
Query: 197 EFYAYLYPKLERLSMKTD-FLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLD 255
+ L+ +++ D +L+R V+E SGGERKR E+ + + DLAILDE DSG+D
Sbjct: 121 ---EKIREALKLVNLDPDKYLDRYVDETLSGGERKRIELASIICMEPDLAILDEPDSGID 177
Query: 256 VDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
+ + ++ + + L SLL+ITH L E + ++ G +IK+GD
Sbjct: 178 IVSFDEIKRVFDYLKDKGCSLLVITHREELAEH--ADRVSLICAGEVIKSGD 227
>sp|Q8DQY5|Y430_STRR6 Putative ABC transporter ATP-binding protein spr0430
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=spr0430 PE=3 SV=1
Length = 560
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 114/215 (53%), Gaps = 15/215 (6%)
Query: 94 ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEER 153
ILK ++L + +GE AI+GKNG+GKSTL+K L + TEG +++G+++ ER
Sbjct: 311 ILKSLHLDIKKGEKIAIVGKNGAGKSTLAKAL---SSFIQTEGRYLWEGQDIKGDSVAER 367
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ ++ Q+P ++ N I F +A R R + + EI E Y K+ L
Sbjct: 368 AERVGYV-LQNPNQMISTNMI-FDEVALGLRLRGVDEQEI---ETRVYETLKICGLY--- 419
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
+F N ++ S G++KR I + VLGA++ +LDE +G D ++ + + L
Sbjct: 420 EFRNWPIS-ALSFGQKKRVTIASILVLGAEIILLDEPTAGQDQKNYTEIMEFLEELHQQG 478
Query: 274 NSLLMITHYRRL-LEFIKPTFIHIMEDGRIIKTGD 307
++++MITH +L L++ +M DG +I D
Sbjct: 479 HTIVMITHDMQLMLDYSDRAL--VMVDGELIADTD 511
Score = 39.7 bits (91), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 108/233 (46%), Gaps = 16/233 (6%)
Query: 89 ESKQE-ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG-HPDYEV--TEGSVVFKGEN 144
E++QE L+G++L + +GE I+G +GSGKSTL + L G P+ T G + KG+
Sbjct: 16 ETQQEPTLQGIDLTIYKGEKVLIVGPSGSGKSTLGQCLNGIIPNIYKGHTYGEFLIKGQA 75
Query: 145 LLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYP 204
+M ++S + + + G++ + L A L E +Y
Sbjct: 76 AFDMSIYDKSHLVSTVLQDTDGQFIGLSVAEDLAFALENDVTALD-------EMKGRVYK 128
Query: 205 KLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAK 264
E+L + R + SGG+++R + + + + + + DE + LD + +D+ +
Sbjct: 129 WAEKLDLLPLLDQR--PQDLSGGQKQRVSLAGVLIDESPILLFDEPLANLDPKSGQDIIE 186
Query: 265 AVNGLLTPKNSLLMITHYRRLLEFIKPT-FIHIMEDGRIIKTG--DASIATVL 314
++ + + + +I +R P I ++ DGRI+ G D +AT L
Sbjct: 187 LIDQIHKEEGTTTLIIEHRLEDVLHCPVDRIVLINDGRILFNGSPDQLLATDL 239
>sp|Q1QX69|MSBA_CHRSD Lipid A export ATP-binding/permease protein MsbA
OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC
BAA-138 / NCIMB 13768) GN=msbA PE=3 SV=1
Length = 579
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 119/242 (49%), Gaps = 28/242 (11%)
Query: 89 ESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPD-YEVTEGSVVFKGENLLE 147
E + E+LKG++L V +GE+ AI+G++GSGKSTL ++ P Y TEG V+ ++ E
Sbjct: 349 EDQAEVLKGIDLDVPQGEMIAIVGRSGSGKSTLVSLM---PRFYRPTEGRVLLDDVDIQE 405
Query: 148 --MEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPE-----IGPIEFYA 200
+ P + +A +S Q + N ++AY G P+ + A
Sbjct: 406 YALSPLRQRIA--LVSQQ----VTLFNTTIAANIAY-------GHPDADREAVESAARSA 452
Query: 201 YLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALR 260
Y + +ERL D + + SGG+R+R I + A L +LDE S LD ++ R
Sbjct: 453 YAHEFIERLPNGYDTVVGDNGVMLSGGQRQRLAIARAIFKDAPLLVLDEATSALDTESER 512
Query: 261 DVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYK 320
+ +A+ + + + + I H RL + I +ME G II++G + ++G Y
Sbjct: 513 YIQQALERVCRGRTTFV-IAH--RLSTIERADRILVMEQGEIIESGTHG-ELLAQDGAYA 568
Query: 321 AI 322
A+
Sbjct: 569 AL 570
>sp|C0SP98|YKFD_BACSU Putative oligopeptide transport ATP-binding protein YkfD
OS=Bacillus subtilis (strain 168) GN=ykfD PE=3 SV=1
Length = 329
Score = 69.7 bits (169), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 101/220 (45%), Gaps = 28/220 (12%)
Query: 76 PLLQVTGLTAVIAESKQEILK---GVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYE 132
PLL+V+ L K+ +K GV + EGE ++G++G GKSTL +VL+ Y+
Sbjct: 5 PLLEVSQLKMHFDAGKKRTVKAVDGVTFQIREGETFGLVGESGCGKSTLGRVLMRL--YQ 62
Query: 133 VTEGSVVFKGENLLEMEPEERSL--AGLFMSFQSPVEI--PGVNNIDF------LHMAYN 182
TEGSV ++G NL + +E+ L M FQ P P + + +H YN
Sbjct: 63 PTEGSVTYRGTNLHALSEKEQFAFNRKLQMIFQDPYASLNPRMTVREIILEPMEIHNLYN 122
Query: 183 ARRRKLGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGA 242
+ +L + LE + + DF +R +E FSGG+R+R I + L
Sbjct: 123 THKARL-----------LVVDELLEAVGLHPDFGSRYPHE-FSGGQRQRIGIARALSLNP 170
Query: 243 DLAILDEIDSGLDVDALRDVAKAVNGLLTPKN-SLLMITH 281
+ + DE S LDV V + L K + L I H
Sbjct: 171 EFIVADEPISALDVSVQAQVVNLLKRLQKEKGLTFLFIAH 210
>sp|P77279|YBBL_ECOLI Uncharacterized ABC transporter ATP-binding protein YbbL
OS=Escherichia coli (strain K12) GN=ybbL PE=1 SV=1
Length = 225
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 108/211 (51%), Gaps = 17/211 (8%)
Query: 72 EKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDY 131
+++ PLLQ+ + + ++K IL +N + GE I G +G GKSTL K++
Sbjct: 2 QENSPLLQLQNVGYLAGDAK--ILNNINFSLRAGEFKLITGPSGCGKSTLLKIVASL--I 57
Query: 132 EVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQP 191
T G+++F+GE++ ++PE + + Q+P + G D L + R R QP
Sbjct: 58 SPTSGTLLFEGEDVSTLKPEIYRQQVSYCA-QTPT-LFGDTVYDNLIFPWQIRNR---QP 112
Query: 192 EIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEID 251
+ P F + LER ++ L +N+ E SGGE++R +++ + +LDEI
Sbjct: 113 D--PAIFLDF----LERFALPDSILTKNIAE-LSGGEKQRISLIRNLQFMPKVLLLDEIT 165
Query: 252 SGLDVDALRDVAKAVNGLLTPKN-SLLMITH 281
S LD +V + ++ + +N ++L +TH
Sbjct: 166 SALDESNKHNVNEMIHRYVREQNIAVLWVTH 196
>sp|Q8TUR7|PSTB_METKA Phosphate import ATP-binding protein PstB OS=Methanopyrus kandleri
(strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938)
GN=pstB PE=3 SV=1
Length = 254
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 100/199 (50%), Gaps = 16/199 (8%)
Query: 91 KQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVL---VGHPDYEVTEGSVVFKGENLLE 147
++E LKG+ L + E ++ I+G +G GKST + L + Y TEG V+F GEN+LE
Sbjct: 15 EEEALKGITLDIPEKKITTIIGPSGCGKSTFLRCLNLMIKEIPYARTEGEVIFDGENVLE 74
Query: 148 MEPEERSLAG---LFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYP 204
E E +A + FQ P P ++ D ++AY R + + EI +Y
Sbjct: 75 YEDEADIIAHRRRVGTVFQHPNPFPWMSIYD--NVAYGLRLMGMDEDEIE-----DRVYE 127
Query: 205 KLERLSMKTDFLNR--NVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDV 262
LE+ ++ +R + SGG+++R I + + ++ ++DE S LD A R +
Sbjct: 128 ALEKAALLDQVEDRLDDPASALSGGQQQRLCIARALAMRPEVLLMDEPTSDLDPIATRKI 187
Query: 263 AKAVNGLLTPKNSLLMITH 281
+ V L + +++ +TH
Sbjct: 188 EETVME-LKGEVTIVFVTH 205
>sp|Q66CI3|MSBA_YERPS Lipid A export ATP-binding/permease protein MsbA OS=Yersinia
pseudotuberculosis serotype I (strain IP32953) GN=msbA
PE=3 SV=1
Length = 582
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE-R 153
L +N+ + G+ A++G++GSGKST++ +L Y+V+EGS++ G +L + R
Sbjct: 359 LNDINIHLEAGKTVALVGRSGSGKSTIANLLTRF--YDVSEGSILLDGHDLRDYRLGALR 416
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ L NNI + AR + + EI AY + ++
Sbjct: 417 NQVALVSQNVHLFNDTVANNIAY------ARNEQYSRAEIEEAARMAYAMDFINKMEHGL 470
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D + SGG+R+R I + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 DTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNR 530
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
SL+ I H RL K I ++EDGRI++ G
Sbjct: 531 TSLV-IAH--RLSTIEKADEIVVIEDGRIVERG 560
>sp|Q1CGH0|MSBA_YERPN Lipid A export ATP-binding/permease protein MsbA OS=Yersinia pestis
bv. Antiqua (strain Nepal516) GN=msbA PE=3 SV=1
Length = 582
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE-R 153
L +N+ + G+ A++G++GSGKST++ +L Y+V+EGS++ G +L + R
Sbjct: 359 LNDINIHLEAGKTVALVGRSGSGKSTIANLLTRF--YDVSEGSILLDGHDLRDYRLGALR 416
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ L NNI + AR + + EI AY + ++
Sbjct: 417 NQVALVSQNVHLFNDTVANNIAY------ARNEQYSRAEIEEAARMAYAMDFINKMEHGL 470
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D + SGG+R+R I + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 DTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNR 530
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
SL+ I H RL K I ++EDGRI++ G
Sbjct: 531 TSLV-IAH--RLSTIEKADEIVVIEDGRIVERG 560
>sp|Q8ZGA9|MSBA_YERPE Lipid A export ATP-binding/permease protein MsbA OS=Yersinia pestis
GN=msbA PE=3 SV=1
Length = 582
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE-R 153
L +N+ + G+ A++G++GSGKST++ +L Y+V+EGS++ G +L + R
Sbjct: 359 LNDINIHLEAGKTVALVGRSGSGKSTIANLLTRF--YDVSEGSILLDGHDLRDYRLGALR 416
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ L NNI + AR + + EI AY + ++
Sbjct: 417 NQVALVSQNVHLFNDTVANNIAY------ARNEQYSRAEIEEAARMAYAMDFINKMEHGL 470
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D + SGG+R+R I + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 DTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNR 530
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
SL+ I H RL K I ++EDGRI++ G
Sbjct: 531 TSLV-IAH--RLSTIEKADEIVVIEDGRIVERG 560
>sp|Q1CA68|MSBA_YERPA Lipid A export ATP-binding/permease protein MsbA OS=Yersinia pestis
bv. Antiqua (strain Antiqua) GN=msbA PE=3 SV=1
Length = 582
Score = 68.2 bits (165), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 102/213 (47%), Gaps = 12/213 (5%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE-R 153
L +N+ + G+ A++G++GSGKST++ +L Y+V+EGS++ G +L + R
Sbjct: 359 LNDINIHLEAGKTVALVGRSGSGKSTIANLLTRF--YDVSEGSILLDGHDLRDYRLGALR 416
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ L NNI + AR + + EI AY + ++
Sbjct: 417 NQVALVSQNVHLFNDTVANNIAY------ARNEQYSRAEIEEAARMAYAMDFINKMEHGL 470
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D + SGG+R+R I + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 DTVIGENGIMLSGGQRQRIAIARALLRNCPILILDEATSALDTESERAIQAALDELQKNR 530
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
SL+ I H RL K I ++EDGRI++ G
Sbjct: 531 TSLV-IAH--RLSTIEKADEIVVIEDGRIVERG 560
>sp|Q8XK20|Y1583_CLOPE Putative ABC transporter ATP-binding protein CPE1583 OS=Clostridium
perfringens (strain 13 / Type A) GN=CPE1583 PE=3 SV=1
Length = 568
Score = 68.2 bits (165), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 119/242 (49%), Gaps = 22/242 (9%)
Query: 89 ESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEM 148
+ K++IL +N +N G++ +++GKNG+GKST+SK++ G ++ ++G ++F+G++L
Sbjct: 313 DKKKDILSDINFKINRGDIVSVVGKNGAGKSTISKIICGF--FKESKGDILFEGKSLDGK 370
Query: 149 EPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGP--IEFYAY--LYP 204
+ER + + Q+P ++ I F +A R R + + E+ IE LYP
Sbjct: 371 TIKERG-EEIGVVLQNPNQMISKTMI-FDEVALGLRVRGIDEKEVKERVIETLKTCGLYP 428
Query: 205 KLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAK 264
+ N V+ S G++KR I + VL + ILDE +G D ++ +
Sbjct: 429 ----------YRNWPVS-ALSFGQKKRVTIASILVLNPKVIILDEPTAGQDYKHYNEIME 477
Query: 265 AVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIAT---VLEEGGYKA 321
+ L ++++ITH L+ I I +I T A I T V+E+ K
Sbjct: 478 FLLKLNKKGVTIILITHDMHLMLEYTDKAIVISNGRKIADTTSAEILTDKEVIEKASLKE 537
Query: 322 IS 323
S
Sbjct: 538 TS 539
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 106/240 (44%), Gaps = 27/240 (11%)
Query: 75 QPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG----HPD 130
+ +++ TA + L +NL + EGE I G +GSGKSTL+ + G D
Sbjct: 4 KAIIEFKDFTAHYTVQSKPTLNNINLTIYEGEKVLIAGPSGSGKSTLANCINGLIPFSTD 63
Query: 131 YEVTEGSVVFKGENLLEMEPEERS-LAGLFMSFQSP-VEIPGVNNIDFLHMAYNARRRKL 188
E++ GS+ KG+ ++ E S + G + Q P + G+ + +A+ +
Sbjct: 64 IEIS-GSLKIKGKETKDLSVFEISKMVGTVL--QDPDSQFIGLTVAE--DIAFKLENNCV 118
Query: 189 GQPEIGPIEFYAYLYPKLERLSMKTDFLNR--NVNEGFSGGERKRNEILQLAVLGADLAI 246
Q E + K+ +S D NR SGG+++R + V D+ +
Sbjct: 119 SQEE---------MKKKVNYVSKIVDIENRLDLAPYSLSGGQKQRVTLAGTIVDDVDILL 169
Query: 247 LDEIDSGLDVDALRDVAKAVNGLLT-PKNSLLMITHYRRLLEFIKPTF--IHIMEDGRII 303
DE + LD A + + ++ + K ++++I H RL E + I +M +G II
Sbjct: 170 FDEPLASLDPAAGKASIELIDKIQKEEKKTVIIIEH--RLEEVLNCDVDRIILMNEGEII 227
>sp|Q601T5|ECFA2_MYCH2 Energy-coupling factor transporter ATP-binding protein EcfA 2
OS=Mycoplasma hyopneumoniae (strain 232) GN=ecfA2 PE=3
SV=1
Length = 272
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 22/221 (9%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
Q +LK +N++ +G+ +AI+G NGSGKST SK+L G ++ +GS+ G LL E
Sbjct: 17 QLVLKNINVVFEKGKYYAILGHNGSGKSTFSKILSGI--FKPQKGSIEVDGV-LLNKENL 73
Query: 152 ERSLAGLFMSFQSP----VEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE 207
+ + + FQ+P V ++I F N +K+ Q A L K++
Sbjct: 74 TKIRKKIGIIFQNPDNQFVGATVEDDIAFSLENINEDPKKMSQ-------IIANLAAKVQ 126
Query: 208 RLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVN 267
S +L+R + SGG+++R I + L ++ I DEI S LD DV K ++
Sbjct: 127 MES----YLDRE-PQFLSGGQKQRVAIASVLALNPEIIIFDEITSMLDPRGKYDVVKILD 181
Query: 268 GLLTPKN-SLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
L K +L+ ITH + E I I + +G II GD
Sbjct: 182 DLRKDKTKTLISITH--NMNEAILADEIIVFANGGIIAQGD 220
>sp|Q4A8A2|ECFA1_MYCH7 Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Mycoplasma hyopneumoniae (strain 7448) GN=ecfA1 PE=3
SV=1
Length = 272
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 109/221 (49%), Gaps = 22/221 (9%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
Q +LK +N++ +G+ +AI+G NGSGKST SK+L G ++ +GS+ G LL E
Sbjct: 17 QLVLKNINVVFEKGKYYAILGHNGSGKSTFSKILSGI--FKPQKGSIEVDGV-LLNKENL 73
Query: 152 ERSLAGLFMSFQSP----VEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE 207
+ + + FQ+P V ++I F N +K+ Q A L K++
Sbjct: 74 TKIRKKIGIIFQNPDNQFVGATVEDDIAFSLENINEDPKKMSQ-------IIANLAAKVQ 126
Query: 208 RLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVN 267
S +L+R + SGG+++R I + L ++ I DEI S LD DV K ++
Sbjct: 127 MES----YLDRE-PQFLSGGQKQRVAIASVLALNPEIIIFDEITSMLDPRGKYDVVKILD 181
Query: 268 GLLTPKN-SLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
L K +L+ ITH + E I I + +G II GD
Sbjct: 182 DLRKDKTKTLISITH--NMNEAILADEIIVFANGGIIAQGD 220
>sp|Q81CT8|Y2655_BACCR Putative ABC transporter ATP-binding protein BC_2655 OS=Bacillus
cereus (strain ATCC 14579 / DSM 31) GN=BC_2655 PE=3 SV=2
Length = 566
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 29/252 (11%)
Query: 70 QDEKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHP 129
++ K++ LL+V L+ +KQ++L+ VNLL+ EGE+ A++G NG+GKSTL+ L+G
Sbjct: 292 RNAKNKELLKVENLSFSYP-NKQKVLENVNLLIYEGEIVALLGHNGAGKSTLAHSLIGIN 350
Query: 130 DYEVTEGSVVFKGENLLEMEPEERSLAGLFMSF--QSP---VEIPGV-NNIDFLHMAYNA 183
++ G + KGE++ +R G +S+ Q+P + P V + F +N
Sbjct: 351 --KMKNGKIALKGEDISSWSIRKR---GEIISYVMQNPNHMITQPTVFEEVSFTLTLHNF 405
Query: 184 RRRKLGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGAD 243
+ ++ G ++ LYP F N + + S G++KR I +
Sbjct: 406 SKEEIKNKVEGILKICG-LYP----------FRNWPI-QALSYGQKKRLTIASVLTTNPK 453
Query: 244 LAILDEIDSGLDVDALRDVAKAVNGLLTPKNSLLMITHYRRL-LEFIKPTFIHIMEDGRI 302
L ILDE +G D + + L S ++ITH L LE+ ++ +G+I
Sbjct: 454 LIILDEPTAGQDYYHYKQFMSFIKNLAKKGISFVVITHDMNLALEYTDRAV--VLHEGKI 511
Query: 303 IKTGDASIATVL 314
I D ++ VL
Sbjct: 512 I--ADNTVFDVL 521
Score = 35.4 bits (80), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 107/245 (43%), Gaps = 31/245 (12%)
Query: 75 QPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV- 133
QP++ T + Q L + + GE I G++GSGKSTL+ + G +
Sbjct: 2 QPIISFEQFTFQYGHAAQPTLSDITFHIYPGEKVLIAGRSGSGKSTLAHCINGLIPFSYE 61
Query: 134 --TEGSVVFKGENLLEMEPEERS-LAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQ 190
+ G+V+ G++ E E+S G + Q I D +A+ + Q
Sbjct: 62 GNSTGNVLIAGKDPREGSIFEQSKQVGTILQDQDAQFIGLTVEED---VAFYLENECVKQ 118
Query: 191 PEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEI 250
+ I + L ++ M T F ++ +E SGG+++ + L AD+ + DE
Sbjct: 119 DNMKKI-----VSDSLRKVKMHT-FHKQSPHE-LSGGQKQTVSLAGLLTTNADILLFDEP 171
Query: 251 DSGLD-------VDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTF--IHIMEDGR 301
+ LD ++ ++D+ + N ++++I H R+ E K + ++++G+
Sbjct: 172 LANLDPLSAIHTIELMKDIHEQYN------KTIVIIEH--RIEEIFKLDLDKVILIDEGK 223
Query: 302 IIKTG 306
+I G
Sbjct: 224 VIAMG 228
>sp|Q3IGX5|MSBA_PSEHT Lipid A export ATP-binding/permease protein MsbA
OS=Pseudoalteromonas haloplanktis (strain TAC 125)
GN=msbA PE=3 SV=1
Length = 581
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 128/258 (49%), Gaps = 24/258 (9%)
Query: 72 EKSQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDY 131
+K + L++V +T + +L ++L + GE A++G++GSGKST+S +L + D
Sbjct: 332 DKVKGLIEVKNVTFKYPTKDEPVLNNLSLTIKAGESIALVGRSGSGKSTISNLLPRYYDL 391
Query: 132 ----EVTEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRK 187
E+ + L ++ + ++ + F + NNI + +R+
Sbjct: 392 EAPSEILLDGIALHDYKLTDLRRQFALVSQQVVLFNDSI----ANNICY------GLQRE 441
Query: 188 LGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEG---FSGGERKRNEILQLAVLGADL 244
+ Q E+ + A+++ ++ L + LN V E SGG+R+R I + + A +
Sbjct: 442 ISQQELEKVAKQAHVWEFVKDLPEQ---LNTMVGENGVMLSGGQRQRIAIARAILKDAPI 498
Query: 245 AILDEIDSGLDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIK 304
ILDE S LD ++ + + +A+ L+ K S++ I H RL I+++++G +I+
Sbjct: 499 LILDEATSALDTESEKLIQQALEALMKDKTSIV-IAH--RLSTIENSDRIYVIDNGSVIE 555
Query: 305 TGDASIATVLEEGGYKAI 322
+GD ++ + G Y A+
Sbjct: 556 SGD-HLSLLANNGTYSAL 572
>sp|Q8LPQ6|AB28B_ARATH ABC transporter B family member 28 OS=Arabidopsis thaliana
GN=ABCB28 PE=2 SV=1
Length = 714
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 113/235 (48%), Gaps = 14/235 (5%)
Query: 93 EILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE 152
++L G++L +N G V A++G +G+GKST+ ++L YE T+G + GE++ + E
Sbjct: 486 KVLDGLSLTLNSGTVTALVGSSGAGKSTIVQLLARF--YEPTQGRITVGGEDVRMFDKSE 543
Query: 153 RSLAGLFMSFQSPV--EIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLS 210
+ ++ Q PV + NI AY + + +I A + + L
Sbjct: 544 WAKVVSIVN-QEPVLFSLSVAENI-----AYGLPNEHVSKDDIIKAAKAANAHDFIISLP 597
Query: 211 MKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLL 270
D L SGG+R+R I + + A + ILDE S LD + R V A+N L+
Sbjct: 598 QGYDTLVGERGGLLSGGQRQRVAIARSLLKNAPILILDEATSALDAVSERLVQSALNRLM 657
Query: 271 TPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGYKAISGS 325
+ + L+I H RL I + DG+II+ G S V ++G Y ++ G+
Sbjct: 658 KDRTT-LVIAH--RLSTVQSANQIAVCSDGKIIELGTHS-ELVAQKGSYASLVGT 708
>sp|Q97SA3|Y483_STRPN Putative ABC transporter ATP-binding protein SP_0483
OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=SP_0483 PE=3 SV=1
Length = 560
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 111/210 (52%), Gaps = 13/210 (6%)
Query: 94 ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEER 153
ILK ++L + +GE AI+GKNG+GKSTL+K + + TEG +++ +++ ER
Sbjct: 311 ILKSLHLDIKKGEKIAIVGKNGAGKSTLAKAI---SSFIQTEGRYLWEKQDIKGDSVAER 367
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ ++ Q+P ++ N I F +A R R + + EI E Y K+ L
Sbjct: 368 AERVGYV-LQNPNQMISTNMI-FDEVALGLRLRGVDEKEI---ETRVYETLKICGLY--- 419
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
+F N ++ S G++KR I + VLGA++ +LDE +G D ++ + + L
Sbjct: 420 EFRNWPIS-ALSFGQKKRVTIASILVLGAEIILLDEPTAGQDQKNYTEIMEFLEELHQKG 478
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRII 303
++++MITH +L+ + +M DG +I
Sbjct: 479 HTIVMITHDMQLM-LDYSDRVLVMVDGELI 507
Score = 40.8 bits (94), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 111/233 (47%), Gaps = 16/233 (6%)
Query: 89 ESKQE-ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG-HPD-YE-VTEGSVVFKGEN 144
E++QE L+G++L + +GE I+G +GSGKSTL + L G P+ Y+ T G + KG+
Sbjct: 16 ETQQEPTLQGIDLTIYKGEKVLIVGPSGSGKSTLGQCLNGIIPNIYKGQTYGEFLIKGQV 75
Query: 145 LLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYP 204
+M ++S + + + G++ + L A L E +Y
Sbjct: 76 AFDMSIYDKSHLVSTVLQDTDGQFIGLSVAEDLAFALENDVTALD-------EMKGRVYK 128
Query: 205 KLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAK 264
E+L + R + SGG+++R + + + + + + DE + LD + +D+ +
Sbjct: 129 WAEKLDLLPLLDQR--PQDLSGGQKQRVSLAGVLIDESPILLFDEPLANLDPKSGQDIIE 186
Query: 265 AVNGLLTPKNSLLMITHYRRLLEFIKPT-FIHIMEDGRIIKTG--DASIATVL 314
++ + + + +I +R +P I ++ DGRI+ G D +AT L
Sbjct: 187 LIDQIHKEEGTTTLIIEHRLEDVLHRPVDRIVLINDGRILFNGSPDQLLATDL 239
>sp|Q4AA75|ECFA1_MYCHJ Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Mycoplasma hyopneumoniae (strain J / ATCC 25934 /
NCTC 10110) GN=ecfA1 PE=3 SV=1
Length = 272
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 109/221 (49%), Gaps = 22/221 (9%)
Query: 92 QEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPE 151
Q +LK +N++ +G+ +AI+G NGSGKST SK+L G ++ +GS+ G LL E
Sbjct: 17 QLVLKNINVVFEKGKYYAILGHNGSGKSTFSKILSGI--FKPQKGSIEVDGV-LLNKENL 73
Query: 152 ERSLAGLFMSFQSP----VEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE 207
+ + + FQ+P V ++I F N +K+ Q A L K++
Sbjct: 74 TKIRKKIGIIFQNPDNQFVGATVEDDIAFSLENINEDPKKMSQ-------IIANLAAKVQ 126
Query: 208 RLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVN 267
S +L+R + SGG++++ I + L ++ I DEI S LD DV K ++
Sbjct: 127 MES----YLDRE-PQFLSGGQKQKVAIASVLALNPEIIIFDEITSMLDPRGKYDVVKILD 181
Query: 268 GLLTPKN-SLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
L K +L+ ITH + E I I + +G II GD
Sbjct: 182 DLRKDKTKTLISITH--NMNEAILADEIIVFANGGIIAQGD 220
>sp|Q6D437|MSBA_ERWCT Lipid A export ATP-binding/permease protein MsbA OS=Erwinia
carotovora subsp. atroseptica (strain SCRI 1043 / ATCC
BAA-672) GN=msbA PE=3 SV=2
Length = 582
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 13/226 (5%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEE-R 153
LK +NL + G+ A++G++GSGKST++ ++ Y++ G ++ G +L E R
Sbjct: 359 LKNINLHIPVGKTVALVGRSGSGKSTIASLITRF--YDIQSGEILLDGHDLREYRLSSLR 416
Query: 154 SLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
+ L NNI + AR + EI AY + ++
Sbjct: 417 NQVALVSQNVHLFNDTIANNIAY------ARNENYSREEIERAAKMAYAMDFINKMEHGL 470
Query: 214 DFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPK 273
D + SGG+R+R I + + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 DTVIGENGVMLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKDR 530
Query: 274 NSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGY 319
+L+ I H RL K I ++EDGRII+ G+ + A + G Y
Sbjct: 531 TALV-IAH--RLSTIEKADEILVVEDGRIIERGNHT-ALLATNGAY 572
>sp|Q4L8L7|HRTA_STAHJ Putative hemin import ATP-binding protein HrtA OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=hrtA PE=3 SV=1
Length = 221
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 108/229 (47%), Gaps = 38/229 (16%)
Query: 88 AESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG--HPDYEVTEGSVVFKGENL 145
+++ E+LK +N VN+GE + G +GSGKSTL +L G P + G V++KGENL
Sbjct: 15 GDAQTEVLKNINFSVNQGEFIILSGASGSGKSTLLNILGGLLSP----SSGDVLYKGENL 70
Query: 146 LEMEPEERSLA--GLFMSFQSPVEIPGVNNIDFLHMAYNAR--RRKLGQP-------EIG 194
E ++ SL + FQS +P + + L + +RK + EIG
Sbjct: 71 FSKEVDKTSLRLNDIGFIFQSSHLVPYLTVREQLMIVAKEAGIKRKEAKDKAQRLLNEIG 130
Query: 195 PIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGL 254
+ +YP L SGGE++R I++ + + + DE + L
Sbjct: 131 -LSHRLDVYPHL-----------------LSGGEKQRVAIMRAFMNEPKIILADEPTASL 172
Query: 255 DVDALRDVAKAVNGLLTPKNSL-LMITHYRRLLEFIKPTFIHIMEDGRI 302
D D V + + + KN + +MITH +RL E+ I I +DG+I
Sbjct: 173 DADRATSVVQMIKAHVQTKNMIGIMITHDKRLFEY-ADRVIEI-QDGKI 219
>sp|Q6YR39|ECFA_ONYPE Energy-coupling factor transporter ATP-binding protein EcfA
OS=Onion yellows phytoplasma (strain OY-M) GN=ecfA PE=3
SV=1
Length = 271
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 111/218 (50%), Gaps = 31/218 (14%)
Query: 94 ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEG-----SVVFKGENLLEM 148
ILK +NL + +I+G NGSGKSTL+K+LVG T+G ++V +NL +
Sbjct: 16 ILKDLNLTIQNNSWVSIVGHNGSGKSTLAKILVGL--LSCTKGQILIDNIVLNEKNLPLL 73
Query: 149 EPEERSLAGLFMSFQSP-VEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE 207
P+ + M FQ+P + G+ + +A+ + + EI + Y K+
Sbjct: 74 RPK------IGMVFQNPDYQFTGLTVRE--DIAFGLENHNVCREEIIA---KVWQYAKMV 122
Query: 208 RLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVN 267
++ D L+ NVN+ SGG+++R I + + ++ I DE+ S LD +V K +
Sbjct: 123 KID---DLLDTNVNQ-LSGGQKQRVAIASILAMEPEIIIFDEVTSFLDPQGALEVQKIIQ 178
Query: 268 GLLTPKNSLLM-ITHYRRLLEF-IKPTFIHIMEDGRII 303
T KN +L+ ITH LEF K I +++ G++I
Sbjct: 179 ---TIKNKILITITHD---LEFAAKSDEIIVLDQGKLI 210
>sp|Q6F1W5|ECFA1_MESFL Energy-coupling factor transporter ATP-binding protein EcfA 1
OS=Mesoplasma florum (strain ATCC 33453 / NBRC 100688 /
NCTC 11704 / L1) GN=ecfA1 PE=3 SV=1
Length = 406
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 108/215 (50%), Gaps = 18/215 (8%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERS 154
L V+ +N+GE A++G NGSGKSTLSK+L+G EG V G N++ + +++
Sbjct: 156 LNDVSFEINDGEYVAVIGHNGSGKSTLSKMLIGV--LSAQEGHVSIYG-NVVTQDNLDQA 212
Query: 155 LAGLFMSFQSPVEIPGVNNIDFLHMAYNAR-RRKLGQPEIGPIEFYAYLYPKLERLSMKT 213
L + FQ+P + F+ + A L + P E +Y +++ M+
Sbjct: 213 RKFLGIVFQNP-------DNQFIGSSVEADIAFGLENKRVNPKEMQKIIYDSAKKVGME- 264
Query: 214 DFLNRN-VNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTP 272
+FL++ +N SGG+++R I L D+ I DE S LD R++ + + L
Sbjct: 265 NFLDKEPLN--LSGGQKQRVAIASALALNPDILIFDEATSMLDPKGNREIKEIMVELRDK 322
Query: 273 -KNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
K +++ ITH + E + + +M GR++K G
Sbjct: 323 MKKTIISITH--DMDEILNADKVIVMNGGRMVKIG 355
>sp|P45094|DPPF_HAEIN Dipeptide transport ATP-binding protein DppF OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=dppF PE=3 SV=1
Length = 327
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 126/258 (48%), Gaps = 43/258 (16%)
Query: 72 EKSQPLLQVTGLT-------AVIAESKQ-EILKGVNLLVNEGEVHAIMGKNGSGKSTLSK 123
+++ PLL GL + A+ +Q + L GV+ + G+ A++G++G GKSTL +
Sbjct: 6 KENTPLLNAIGLKKYYPVKKGLFAKPQQVKALDGVSFQLERGKTLAVVGESGCGKSTLGR 65
Query: 124 VLVGHPDYEVTEGSVVFKGENLLEMEPEERSL--AGLFMSFQSPVEIPGVNNIDFLHMAY 181
+L E T+G + +KG N LE + E ++L + + FQ+P + +
Sbjct: 66 LLTM--IEEPTKGELYYKGHNFLENDSETKALRRKKIQIVFQNP------------YASL 111
Query: 182 NARRRKLGQPEIGPIEFYAYLYPK---------LERLSMKTDFLNRNVNEGFSGGERKRN 232
N R+K+G P+ L K +E++ ++ +F +R FSGG+R+R
Sbjct: 112 NP-RKKIGSILEEPLIINTKLSAKERREKVLSMMEKVGLRAEFYDR-YPHMFSGGQRQRI 169
Query: 233 EILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPKNSL----LMITHYRRLLEF 288
I + +L D+ + DE S LDV A+ +N ++ ++ L + I+H ++E
Sbjct: 170 AIARGLMLDPDVVVADEPVSALDVSVR---AQVLNLMMDLQDELGLSYVFISHDLSVVEH 226
Query: 289 IKPTFIHIMEDGRIIKTG 306
I + +M GR I+ G
Sbjct: 227 IADE-VMVMYLGRCIEKG 243
>sp|Q5P6D5|MACB_AROAE Macrolide export ATP-binding/permease protein MacB OS=Aromatoleum
aromaticum (strain EbN1) GN=macB PE=3 SV=2
Length = 641
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 115/244 (47%), Gaps = 40/244 (16%)
Query: 76 PLLQVTGLTAVI--AESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
PL++++G+T E E+L G++L + GE AI+G +GSGKSTL +L G D
Sbjct: 2 PLIELSGVTKTFRNGELAVEVLHGIDLTILPGEFVAIVGSSGSGKSTLMNIL-GCLDRP- 59
Query: 134 TEGSVVFKGENLLEMEPEERSL------AGLFMSF--------QSPVEIPGVNNIDFLHM 179
T GS F G N+ + +E +L +F S+ + VE+P V +
Sbjct: 60 TSGSYRFMGRNVAAFDRDELALLRRETFGFVFQSYHLIGGASARENVEVPAVYS------ 113
Query: 180 AYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAV 239
G P P E +A L L + +R N+ SGG+++R I + +
Sbjct: 114 ---------GMP---PAERHARATGLLASLGLGERIEHRP-NQ-LSGGQQQRVSIARALM 159
Query: 240 LGADLAILDEIDSGLDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMED 299
G + + DE LD + +V + +N L +++++ITH R + E + I + D
Sbjct: 160 NGGRVILADEPTGALDTKSGAEVMQLLNKLSADGHTIILITHEREVAE--QAQRIIEIRD 217
Query: 300 GRII 303
GRI+
Sbjct: 218 GRIV 221
>sp|Q7N6C6|MSBA_PHOLL Lipid A export ATP-binding/permease protein MsbA OS=Photorhabdus
luminescens subsp. laumondii (strain TT01) GN=msbA PE=3
SV=1
Length = 581
Score = 65.9 bits (159), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 106/213 (49%), Gaps = 10/213 (4%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERS 154
L+ +++ + G++ A++G++GSGKST++ +L Y+V EG++ G +L E + S
Sbjct: 358 LQNISMYIPAGKIVALVGRSGSGKSTIANLLTRF--YDVNEGNIFLDGHDLREYKLS--S 413
Query: 155 LAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLERLSMKTD 214
L G V + N+ ++AY A + + EI AY + +L D
Sbjct: 414 LRGQVALVSQNVHL--FNDTVANNIAY-ASENRYSREEIEKAAEMAYAMDFIRKLDNGLD 470
Query: 215 FLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAVNGLLTPKN 274
+ SGG+R+R I + + + + ILDE S LD ++ R + A++ L +
Sbjct: 471 TMIGENGVLLSGGQRQRIAIARALLRDSPVLILDEATSALDTESERAIQAALDELQKNRT 530
Query: 275 SLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGD 307
SL+ I H RL I ++EDG I++ GD
Sbjct: 531 SLV-IAH--RLSTIENADEILVVEDGHIVERGD 560
>sp|O65934|ABC1_MYCTU ABC transporter ATP-binding/permease protein Rv1747
OS=Mycobacterium tuberculosis GN=Rv1747 PE=1 SV=1
Length = 865
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 96/214 (44%), Gaps = 31/214 (14%)
Query: 78 LQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVG--HPDYEVTE 135
L V G+T I + + +L G++L G + A++G +G+GKSTL++++ G HP T+
Sbjct: 319 LDVRGVTWTI-DGDKTLLDGISLTARPGMLTAVIGPSGAGKSTLARLVAGYTHP----TD 373
Query: 136 GSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLH--------MAYNARRRK 187
G+V F+G N+ RS G+ V D +H + Y A R
Sbjct: 374 GTVTFEGHNVHAEYASLRSRIGM------------VPQDDVVHGQLTVKHALMYAAELRL 421
Query: 188 LGQPEIGPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAIL 247
P+ + + LE L M R + SGG+RKR + + G L IL
Sbjct: 422 --PPDTTKDDRTQVVARVLEELEMSKHIDTRV--DKLSGGQRKRASVALELLTGPSLLIL 477
Query: 248 DEIDSGLDVDALRDVAKAVNGLLTPKNSLLMITH 281
DE SGLD R V + L +L++TH
Sbjct: 478 DEPTSGLDPALDRQVMTMLRQLADAGRVVLVVTH 511
>sp|Q54P13|ABCC8_DICDI ABC transporter C family member 8 OS=Dictyostelium discoideum
GN=abcC8 PE=3 SV=1
Length = 1593
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 118/238 (49%), Gaps = 37/238 (15%)
Query: 89 ESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEM 148
E + IL +NL + +GE+ AI+G+ GSGKS++ LVG D + T+G+V G L
Sbjct: 604 EPNKPILHDINLTIKKGELVAIVGQVGSGKSSIVSSLVG--DLDKTKGTVAVNGSVAL-- 659
Query: 149 EPEERSLAGLFMSFQSPVEIPGV-NNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE 207
+S Q+ ++ + NNI F ++L Q + + L P ++
Sbjct: 660 -----------VSQQAWIQNATLKNNILF--------AKELNQDKYQSVVQACCLEPDIK 700
Query: 208 RL--SMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKA 265
L +T+ + +N SGG+++R I + AD+ I D+ S +D + + K
Sbjct: 701 ILPGGDQTEIGEKGIN--LSGGQKQRVSIARAVYNNADIYIFDDPLSAVDAHVGKAIFKN 758
Query: 266 V----NGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGGY 319
V +G+L K +L +TH L ++ I +M+DGRI++ GD + T++E G +
Sbjct: 759 VLSNQDGILCNKTRIL-VTHAVHYLPYVDR--IILMKDGRIVEEGDFN--TLIEAGSH 811
Score = 34.3 bits (77), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 17/171 (9%)
Query: 94 ILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLE--MEPE 151
+L+G+N + I+G+ G+GKS+L++ L E G++ G ++ E + P
Sbjct: 1360 VLRGINCTIEPKTKVGIVGRTGAGKSSLTQALFRL--VEPLRGTIEIDGIDITELGLNPL 1417
Query: 152 ERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNAR-RRKLGQPEIGPIEFYAYLYPKLERLS 210
+A + Q PV G + YN + EI A+L ++ L
Sbjct: 1418 RSRMA---IIPQDPVLFAG-------SVRYNLDPFDQYDDHEIWEAIENAHLLKAIKDLD 1467
Query: 211 MKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSGLDV--DAL 259
D + ++ + FS G+R+ I + + A++ +LDE S +D+ DAL
Sbjct: 1468 GGLDAMVQDGGDNFSVGQRQLLVIGRALLKKANIIVLDEASSSIDIASDAL 1518
>sp|Q8DPC2|POTA_STRR6 Spermidine/putrescine import ATP-binding protein PotA
OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
GN=potA PE=3 SV=1
Length = 385
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
+P+++ ++ V +S ++LK +N + EG+ + ++G +GSGKST+ ++ G D
Sbjct: 2 KKPIIEFKNVSKVFEDSNTKVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLD--A 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
T G ++ G + ++ +R + +F S+ P +N F ++A+ R RK+ + EI
Sbjct: 60 TTGDIMLDGVRINDIPTNKRDVHTVFQSYAL---FPHMNV--FENVAFPLRLRKIDKKEI 114
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
++ ++ + R++ + SGG+R+R I + + + +LDE S
Sbjct: 115 ------EQRVAEVLKMVQLEGYEKRSIRK-LSGGQRQRVAIARAIINQPRVVLLDEPLSA 167
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
LD+ D+ + L + + + +I +M DG I+++G
Sbjct: 168 LDLKLRTDMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSG 220
>sp|Q97Q42|POTA_STRPN Spermidine/putrescine import ATP-binding protein PotA
OS=Streptococcus pneumoniae serotype 4 (strain ATCC
BAA-334 / TIGR4) GN=potA PE=3 SV=1
Length = 385
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
+P+++ ++ V +S ++LK +N + EG+ + ++G +GSGKST+ ++ G D
Sbjct: 2 KKPIIEFKNVSKVFEDSNTKVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLD--A 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
T G ++ G + ++ +R + +F S+ P +N F ++A+ R RK+ + EI
Sbjct: 60 TTGDIMLDGVRINDIPTNKRDVHTVFQSYAL---FPHMNV--FENVAFPLRLRKIDKKEI 114
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
++ ++ + R++ + SGG+R+R I + + + +LDE S
Sbjct: 115 ------EQRVAEVLKMVQLEGYEKRSIRK-LSGGQRQRVAIARAIINQPRVVLLDEPLSA 167
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
LD+ D+ + L + + + +I +M DG I+++G
Sbjct: 168 LDLKLRTDMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSG 220
>sp|Q04JW0|POTA_STRP2 Spermidine/putrescine import ATP-binding protein PotA
OS=Streptococcus pneumoniae serotype 2 (strain D39 /
NCTC 7466) GN=potA PE=3 SV=1
Length = 385
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 74 SQPLLQVTGLTAVIAESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEV 133
+P+++ ++ V +S ++LK +N + EG+ + ++G +GSGKST+ ++ G D
Sbjct: 2 KKPIIEFKNVSKVFEDSNTKVLKDINFELEEGKFYTLLGASGSGKSTILNIIAGLLD--A 59
Query: 134 TEGSVVFKGENLLEMEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEI 193
T G ++ G + ++ +R + +F S+ P +N F ++A+ R RK+ + EI
Sbjct: 60 TTGDIMLDGVRINDIPTNKRDVHTVFQSYAL---FPHMNV--FENVAFPLRLRKIDKKEI 114
Query: 194 GPIEFYAYLYPKLERLSMKTDFLNRNVNEGFSGGERKRNEILQLAVLGADLAILDEIDSG 253
++ ++ + R++ + SGG+R+R I + + + +LDE S
Sbjct: 115 ------EQRVAEVLKMVQLEGYEKRSIRK-LSGGQRQRVAIARAIINQPRVVLLDEPLSA 167
Query: 254 LDVDALRDVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTG 306
LD+ D+ + L + + + +I +M DG I+++G
Sbjct: 168 LDLKLRTDMQYELRELQQRLGITFVFVTHDQEEALAMSDWIFVMNDGEIVQSG 220
>sp|Q8UBN2|RGMG1_AGRT5 Putative ribose/galactose/methyl galactoside import ATP-binding
protein 1 OS=Agrobacterium tumefaciens (strain C58 /
ATCC 33970) GN=Atu2819 PE=3 SV=2
Length = 505
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 27/228 (11%)
Query: 95 LKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLEMEPEERS 154
L V+ + GEVHA+ G+NG+GKSTL K++ G Y+ +EG+++ KGE + P +
Sbjct: 25 LSNVHFDLRSGEVHAVCGENGAGKSTLMKIISGV--YQPSEGTILHKGEKVQYASPLQSE 82
Query: 155 LAGLFMSFQSPVEIPGVNNIDFLHMAYNARRRKLGQPEIGPIEFYAYLYPKLE-RLSMKT 213
AG+ + Q +P ++ + +++A RR +L + + RL K
Sbjct: 83 AAGIAIIHQELNLVPHLSVAENIYLAREPRR--------------GFLVDRKKLRLDAKR 128
Query: 214 --DFLNRNVN-----EGFSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALRDVAKAV 266
D L ++N S + + EI + L A++ I+DE S L R + K +
Sbjct: 129 CLDRLGVDINPDQLVRSLSVAQCQMVEIAKALSLDAEVLIMDEPTSSLTEQETRLLFKVI 188
Query: 267 NGLLTPKNSLLMITHYRRLLEFIKPT-FIHIMEDGRIIKTGDASIATV 313
L ++ I+H RL E + + I+ DGR I T D + TV
Sbjct: 189 RDLKASGVGIVYISH--RLDEMAEIVDRVTILRDGRYISTDDFASITV 234
>sp|Q5NIG3|MSBA_FRATT Lipid A export ATP-binding/permease protein MsbA OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=msbA PE=3 SV=1
Length = 609
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 26/238 (10%)
Query: 88 AESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLE 147
A + ++L GV++ + G+ A +GK+GSGK+TL+ ++ Y EG ++ G + E
Sbjct: 380 AFGEHKVLSGVSVDIKAGQTVAFVGKSGSGKTTLTSII--SRFYTQHEGEILLDGVDTRE 437
Query: 148 MEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYN----ARRRKLGQPEIGPIEFYAYLY 203
+ E + +S + I N F YN R++ + E+ A Y
Sbjct: 438 LTLE---------NLRSHLSIVSQNVHLFDDTVYNNIAFGLSREVSEEEVIDALKRANAY 488
Query: 204 PKLERLSMKTDFLNRNV-NEG--FSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALR 260
++ LS D +N N+ N G SGG+R+R I + + A + I DE S LD ++ R
Sbjct: 489 EFVQELS---DGINTNIGNNGSKLSGGQRQRISIARALLKNAPVLIFDEATSALDNESER 545
Query: 261 DVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGG 318
V +A+ LT + ++I H RL I +M+ GR++++G +LE+GG
Sbjct: 546 VVQQALES-LTKSCTTIVIAH--RLSTVENADKIVVMDGGRVVESGKHQ--ELLEQGG 598
>sp|Q14JW6|MSBA_FRAT1 Lipid A export ATP-binding/permease protein MsbA OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=msbA
PE=3 SV=1
Length = 609
Score = 65.1 bits (157), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 116/238 (48%), Gaps = 26/238 (10%)
Query: 88 AESKQEILKGVNLLVNEGEVHAIMGKNGSGKSTLSKVLVGHPDYEVTEGSVVFKGENLLE 147
A + ++L GV++ + G+ A +GK+GSGK+TL+ ++ Y EG ++ G + E
Sbjct: 380 AFGEHKVLSGVSVDIKAGQTVAFVGKSGSGKTTLTSII--SRFYTQHEGEILLDGVDTRE 437
Query: 148 MEPEERSLAGLFMSFQSPVEIPGVNNIDFLHMAYN----ARRRKLGQPEIGPIEFYAYLY 203
+ E + +S + I N F YN R++ + E+ A Y
Sbjct: 438 LTLE---------NLRSHLSIVSQNVHLFDDTVYNNIAFGLSREVSEEEVIDALKRANAY 488
Query: 204 PKLERLSMKTDFLNRNV-NEG--FSGGERKRNEILQLAVLGADLAILDEIDSGLDVDALR 260
++ LS D +N N+ N G SGG+R+R I + + A + I DE S LD ++ R
Sbjct: 489 EFVQELS---DGINTNIGNNGSKLSGGQRQRISIARALLKNAPVLIFDEATSALDNESER 545
Query: 261 DVAKAVNGLLTPKNSLLMITHYRRLLEFIKPTFIHIMEDGRIIKTGDASIATVLEEGG 318
V +A+ LT + ++I H RL I +M+ GR++++G +LE+GG
Sbjct: 546 VVQQALES-LTKSCTTIVIAH--RLSTVENADKIVVMDGGRVVESGKHQ--ELLEQGG 598
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.135 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,517,916
Number of Sequences: 539616
Number of extensions: 5197876
Number of successful extensions: 26435
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2473
Number of HSP's successfully gapped in prelim test: 1251
Number of HSP's that attempted gapping in prelim test: 19914
Number of HSP's gapped (non-prelim): 5699
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)