Query 020521
Match_columns 325
No_of_seqs 315 out of 1659
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 03:03:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020521.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/020521hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 6.2E-74 1.3E-78 519.0 23.0 247 68-314 69-321 (369)
2 PLN03158 methionine aminopepti 100.0 1.1E-62 2.4E-67 477.6 30.4 257 68-324 90-369 (396)
3 COG0024 Map Methionine aminope 100.0 3.2E-51 7E-56 373.2 24.3 204 109-312 4-210 (255)
4 PRK12897 methionine aminopepti 100.0 5.9E-50 1.3E-54 368.4 26.2 216 108-323 2-235 (248)
5 PRK12318 methionine aminopepti 100.0 2E-49 4.4E-54 372.6 28.8 209 108-316 41-251 (291)
6 PRK07281 methionine aminopepti 100.0 1.3E-49 2.8E-54 372.5 26.9 217 108-324 2-268 (286)
7 TIGR00500 met_pdase_I methioni 100.0 3.4E-48 7.3E-53 356.0 27.2 216 109-324 2-235 (247)
8 PRK05716 methionine aminopepti 100.0 2.3E-47 5.1E-52 351.1 26.7 217 108-324 3-237 (252)
9 PRK09795 aminopeptidase; Provi 100.0 7.9E-48 1.7E-52 372.2 24.6 213 104-324 121-339 (361)
10 PRK12896 methionine aminopepti 100.0 2.5E-47 5.4E-52 351.5 26.7 219 106-324 6-243 (255)
11 COG0006 PepP Xaa-Pro aminopept 100.0 2.9E-46 6.3E-51 364.1 22.9 215 102-324 146-364 (384)
12 cd01090 Creatinase Creatine am 100.0 9.6E-45 2.1E-49 330.0 25.4 209 116-324 1-217 (228)
13 cd01086 MetAP1 Methionine Amin 100.0 2.2E-44 4.7E-49 328.7 25.8 209 116-324 1-227 (238)
14 PRK15173 peptidase; Provisiona 100.0 8.7E-45 1.9E-49 346.0 23.6 216 100-324 85-303 (323)
15 PRK14575 putative peptidase; P 100.0 4E-44 8.7E-49 351.3 24.2 217 99-324 167-386 (406)
16 cd01087 Prolidase Prolidase. E 100.0 6.4E-44 1.4E-48 326.8 23.5 202 116-324 1-232 (243)
17 TIGR02993 ectoine_eutD ectoine 100.0 4E-44 8.7E-49 349.8 22.8 214 101-324 149-371 (391)
18 PRK10879 proline aminopeptidas 100.0 7.7E-44 1.7E-48 352.1 24.7 213 104-324 167-408 (438)
19 cd01092 APP-like Similar to Pr 100.0 6.1E-43 1.3E-47 311.7 25.1 201 116-324 1-202 (208)
20 PRK14576 putative endopeptidas 100.0 2.8E-43 6.1E-48 345.2 24.5 214 102-324 169-385 (405)
21 cd01085 APP X-Prolyl Aminopept 100.0 1E-41 2.3E-46 309.2 23.3 201 117-324 5-213 (224)
22 PRK13607 proline dipeptidase; 100.0 4E-42 8.7E-47 339.8 22.3 215 103-324 154-427 (443)
23 PF00557 Peptidase_M24: Metall 100.0 1.6E-41 3.4E-46 303.0 22.4 200 117-324 1-204 (207)
24 TIGR00495 crvDNA_42K 42K curve 100.0 1.2E-39 2.5E-44 316.9 24.5 212 108-321 11-242 (389)
25 cd01066 APP_MetAP A family inc 100.0 2.6E-39 5.7E-44 285.4 23.7 200 116-324 1-201 (207)
26 PTZ00053 methionine aminopepti 100.0 1.8E-38 3.9E-43 311.6 25.1 203 106-318 148-367 (470)
27 PRK08671 methionine aminopepti 100.0 5.3E-38 1.2E-42 295.4 24.0 192 115-318 1-196 (291)
28 TIGR00501 met_pdase_II methion 100.0 1.2E-37 2.6E-42 293.4 23.4 195 113-319 2-200 (295)
29 cd01091 CDC68-like Related to 100.0 1.4E-37 3E-42 285.4 20.9 205 116-324 1-231 (243)
30 cd01089 PA2G4-like Related to 100.0 4.3E-37 9.4E-42 279.5 22.5 205 116-324 1-217 (228)
31 cd01088 MetAP2 Methionine Amin 100.0 4.1E-37 9E-42 289.3 22.5 192 116-319 1-196 (291)
32 KOG2414 Putative Xaa-Pro amino 100.0 1.4E-35 3.1E-40 279.2 16.2 208 104-321 222-457 (488)
33 KOG2737 Putative metallopeptid 100.0 3.7E-32 8.1E-37 253.9 16.3 217 102-322 177-453 (492)
34 KOG2413 Xaa-Pro aminopeptidase 99.9 3.3E-23 7.2E-28 204.3 15.8 216 104-324 301-530 (606)
35 KOG1189 Global transcriptional 99.9 8.5E-21 1.8E-25 189.9 15.1 209 95-310 122-345 (960)
36 KOG2775 Metallopeptidase [Gene 99.8 1.4E-17 3.1E-22 152.3 15.0 192 111-311 80-288 (397)
37 KOG2776 Metallopeptidase [Gene 99.7 1.5E-16 3.1E-21 148.9 15.9 203 108-312 13-236 (398)
38 COG5406 Nucleosome binding fac 99.6 2.4E-15 5.2E-20 148.6 12.4 207 98-309 158-385 (1001)
39 cd01066 APP_MetAP A family inc 97.5 0.0018 4E-08 56.4 12.1 102 117-220 102-204 (207)
40 cd01092 APP-like Similar to Pr 97.2 0.0042 9.1E-08 54.9 11.4 100 117-219 103-204 (208)
41 PLN03158 methionine aminopepti 97.2 0.0017 3.7E-08 64.0 9.1 106 208-316 127-237 (396)
42 PRK05716 methionine aminopepti 97.1 0.0074 1.6E-07 55.3 11.5 100 118-220 119-240 (252)
43 TIGR00500 met_pdase_I methioni 96.9 0.013 2.9E-07 53.5 12.1 100 118-220 117-238 (247)
44 COG0024 Map Methionine aminope 96.9 0.0045 9.8E-08 57.3 8.8 92 223-316 12-106 (255)
45 cd01088 MetAP2 Methionine Amin 96.9 0.0051 1.1E-07 58.1 9.4 84 223-313 2-87 (291)
46 cd01086 MetAP1 Methionine Amin 96.9 0.018 3.8E-07 52.3 12.2 102 118-220 109-230 (238)
47 PRK15173 peptidase; Provisiona 96.8 0.015 3.2E-07 55.8 11.7 103 118-220 203-306 (323)
48 PRK14575 putative peptidase; P 96.7 0.018 3.9E-07 57.0 11.7 103 118-220 286-389 (406)
49 PRK12896 methionine aminopepti 96.7 0.0079 1.7E-07 55.2 8.6 98 212-314 4-108 (255)
50 PRK12897 methionine aminopepti 96.7 0.016 3.4E-07 53.3 10.4 100 118-220 118-239 (248)
51 PRK14576 putative endopeptidas 96.6 0.024 5.2E-07 56.0 12.0 102 118-220 285-388 (405)
52 PRK12318 methionine aminopepti 96.6 0.026 5.5E-07 53.4 11.3 87 118-207 159-248 (291)
53 cd01090 Creatinase Creatine am 96.5 0.036 7.8E-07 50.4 11.7 100 118-220 110-220 (228)
54 TIGR02993 ectoine_eutD ectoine 96.5 0.026 5.6E-07 55.5 11.4 99 118-220 271-374 (391)
55 PRK09795 aminopeptidase; Provi 96.5 0.043 9.3E-07 53.2 12.5 104 113-219 236-341 (361)
56 PRK08671 methionine aminopepti 96.4 0.062 1.3E-06 50.7 12.7 97 118-219 102-205 (291)
57 cd01091 CDC68-like Related to 96.4 0.033 7.3E-07 51.2 10.5 102 117-220 119-234 (243)
58 PRK07281 methionine aminopepti 96.3 0.038 8.3E-07 52.1 10.7 85 118-205 149-237 (286)
59 KOG2738 Putative methionine am 96.3 0.023 5.1E-07 53.2 8.7 91 223-316 123-216 (369)
60 cd01087 Prolidase Prolidase. E 96.3 0.05 1.1E-06 49.6 10.9 102 118-220 104-235 (243)
61 PF00557 Peptidase_M24: Metall 96.1 0.054 1.2E-06 47.9 10.1 87 223-314 1-88 (207)
62 cd01089 PA2G4-like Related to 96.0 0.076 1.7E-06 48.1 10.8 99 117-220 120-220 (228)
63 TIGR00501 met_pdase_II methion 95.4 0.13 2.7E-06 48.8 10.2 98 119-218 106-207 (295)
64 COG0006 PepP Xaa-Pro aminopept 94.9 0.28 6.2E-06 47.9 11.2 100 119-220 264-367 (384)
65 TIGR00495 crvDNA_42K 42K curve 94.8 0.27 5.7E-06 48.5 10.6 91 224-316 21-120 (389)
66 PTZ00053 methionine aminopepti 94.2 0.62 1.3E-05 46.9 11.7 85 225-314 161-251 (470)
67 PRK10879 proline aminopeptidas 94.0 0.65 1.4E-05 46.4 11.5 101 119-220 284-411 (438)
68 cd01085 APP X-Prolyl Aminopept 91.8 3.4 7.4E-05 37.4 12.1 97 121-219 115-215 (224)
69 PRK13607 proline dipeptidase; 87.8 3.7 8E-05 41.2 9.7 88 120-207 271-391 (443)
70 KOG2775 Metallopeptidase [Gene 84.4 5.1 0.00011 38.0 8.0 85 223-313 86-177 (397)
71 KOG1189 Global transcriptional 71.0 16 0.00034 38.9 7.6 98 119-220 259-368 (960)
72 cd01666 TGS_DRG_C TGS_DRG_C: 63.8 26 0.00057 26.1 5.8 52 137-199 21-73 (75)
73 PF00254 FKBP_C: FKBP-type pep 63.2 13 0.00028 28.2 4.2 51 188-247 2-59 (94)
74 PF07305 DUF1454: Protein of u 62.4 54 0.0012 29.0 8.2 75 222-309 114-188 (200)
75 PRK01490 tig trigger factor; P 54.9 41 0.00089 33.4 7.2 58 139-220 130-191 (435)
76 TIGR00115 tig trigger factor. 52.9 45 0.00097 32.8 7.0 58 140-220 119-180 (408)
77 COG5406 Nucleosome binding fac 47.7 64 0.0014 33.9 7.1 83 113-203 298-385 (1001)
78 PF05184 SapB_1: Saposin-like 42.6 51 0.0011 20.6 3.8 34 122-155 3-36 (39)
79 cd04938 TGS_Obg-like TGS_Obg-l 41.2 48 0.001 24.7 4.0 47 137-199 28-74 (76)
80 KOG2776 Metallopeptidase [Gene 35.1 1.9E+02 0.0042 28.3 7.8 79 225-314 24-120 (398)
81 PF03477 ATP-cone: ATP cone do 34.1 30 0.00066 26.1 2.0 36 124-159 39-74 (90)
82 COG0544 Tig FKBP-type peptidyl 30.0 1.1E+02 0.0024 30.7 5.7 45 140-208 131-175 (441)
83 PF09506 Salt_tol_Pase: Glucos 29.0 2E+02 0.0043 28.0 6.8 127 111-238 97-279 (381)
84 TIGR03516 ppisom_GldI peptidyl 28.0 1.3E+02 0.0029 26.2 5.2 54 187-249 82-141 (177)
85 PF12631 GTPase_Cys_C: Catalyt 27.5 1.3E+02 0.0029 21.9 4.5 42 221-262 10-51 (73)
86 TIGR02399 salt_tol_Pase glucos 26.9 2.2E+02 0.0047 27.8 6.7 127 111-238 103-284 (389)
87 PF10415 FumaraseC_C: Fumarase 26.4 84 0.0018 21.9 3.0 35 118-152 10-49 (55)
88 PRK05728 DNA polymerase III su 24.5 4.1E+02 0.0089 22.0 8.1 101 118-227 14-118 (142)
89 cd01669 TGS_Ygr210_C TGS_Ygr21 22.3 2.3E+02 0.0051 21.0 4.9 48 137-199 27-74 (76)
90 PRK05423 hypothetical protein; 22.2 1.2E+02 0.0026 23.8 3.3 27 129-155 44-70 (104)
91 PF14162 YozD: YozD-like prote 21.6 1.2E+02 0.0026 21.1 2.9 22 141-162 8-29 (57)
92 PF04363 DUF496: Protein of un 20.3 1.4E+02 0.0031 23.1 3.3 25 130-154 38-62 (95)
93 KOG2611 Neurochondrin/leucine- 20.2 44 0.00096 34.0 0.8 67 194-260 584-660 (698)
94 PF02829 3H: 3H domain; Inter 20.1 2.3E+02 0.0051 22.3 4.7 67 197-265 23-96 (98)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=6.2e-74 Score=519.02 Aligned_cols=247 Identities=60% Similarity=1.002 Sum_probs=235.6
Q ss_pred CCCCcccCCCccCCCCCCCCCCCCCCCCccCCCC----CCCCC-CCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 020521 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (325)
Q Consensus 68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~~----~~~~~-~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvT 142 (325)
.+.|+++||||++||+|+||+||++|+|+.+|.+ ++... ...|+++++|+.||+||+|+++++++|..+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 3789999999999999999999999999999653 22222 457899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCC
Q 020521 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (325)
Q Consensus 143 e~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~ 222 (325)
++|||+++|++++++|+|||||||++||+++|+|+|+++|||+||.|+|++|||||||++++++|||+|+++||+||+++
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~GyHGDlneTffvG~Vd 228 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLNGYHGDLNETFFVGNVD 228 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEeccccCccccceEeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeeecCCccccCCccccccCC-CCeeecCCc
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQ 301 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~L~~GM 301 (325)
++.++|+++++||++.||+++|||+++++|++.|++++.++||++++.|+|||||..||..|.|.||.++ ..++|++||
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sVVr~ycGHGig~~FH~~PnipHya~n~a~GvM~~G~ 308 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSVVRSYCGHGIGRVFHCAPNIPHYAKNKAPGVMKPGQ 308 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCceeehhhhccccccccccCCCchhhcccCCcceeecCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999875 778999999
Q ss_pred EEEEcceeeecCc
Q 020521 302 TFTIGNIIFSFQV 314 (325)
Q Consensus 302 vftIEP~i~~~g~ 314 (325)
+|||||||+.+.+
T Consensus 309 tFTIEPmit~G~~ 321 (369)
T KOG2738|consen 309 TFTIEPMITIGTW 321 (369)
T ss_pred eEEeeeeeccccc
Confidence 9999999998654
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.1e-62 Score=477.63 Aligned_cols=257 Identities=46% Similarity=0.800 Sum_probs=240.6
Q ss_pred CCCCcccCCCccCCCCCCCCCCCCCCCCccCCCCC-----CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCc
Q 020521 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (325)
Q Consensus 68 ~~~~~~~~~~~~~s~~~~vp~~i~~p~y~~~~~~~-----~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvT 142 (325)
.|.|+++||||++||++.||+||++|+|+.++.+. .+.+.|.|||++||+.||+|+++++++++++.+.++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 37899999999999999999999999999886532 3456799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCC
Q 020521 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD 222 (325)
Q Consensus 143 e~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~ 222 (325)
|.||+++++++++++|++|++++|.+||+++|+|.|+++||++|++++|++||+|+||++++++||++|++|||+||+++
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~GY~aD~tRT~~VG~~~ 249 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYKGCHGDLNETFFVGNVD 249 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEECCEEEeEEeEEEcCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeeecCCccccCCccccccCC-CCeeecCCc
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQ 301 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~L~~GM 301 (325)
+++++++++++++++++|+++|||++++||+++++++++++||+++++++|||||+.+||.|.|.++.++ ..++|++||
T Consensus 250 ~e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~v~~~~GHGIG~~~He~P~i~~~~~~~~~~~l~~GM 329 (396)
T PLN03158 250 EASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSVVKSYCGHGIGELFHCAPNIPHYARNKAVGVMKAGQ 329 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCccCCccCCccccccCCCCCCCcccCCCCCCEecCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999999987543 457999999
Q ss_pred EEEEcceeeec-----------------CcCcEEEEEEee
Q 020521 302 TFTIGNIIFSF-----------------QVANYKVDLVKL 324 (325)
Q Consensus 302 vftIEP~i~~~-----------------g~gGvrie~v~~ 324 (325)
||||||+++.+ |.+++++|+-.|
T Consensus 330 VfTIEP~i~~g~~~~~~~~d~wt~~t~dG~~~aq~E~tvl 369 (396)
T PLN03158 330 VFTIEPMINAGVWRDRMWPDGWTAVTADGKRSAQFEHTLL 369 (396)
T ss_pred EEEECCeeccCcccceecCCCceEEecCCceeeEeeeEEE
Confidence 99999999862 334678987654
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.2e-51 Score=373.21 Aligned_cols=204 Identities=40% Similarity=0.729 Sum_probs=195.3
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC-
Q 020521 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD- 187 (325)
Q Consensus 109 ~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~- 187 (325)
.+|+++||+.||+||+|++++++.+.+.++||+|+.||+..+++++.++|++|++++|.+||..+|+|+|+++|||+|+
T Consensus 4 ~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~d 83 (255)
T COG0024 4 SIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPGD 83 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCCC
Confidence 4899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCC-HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCC
Q 020521 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVD-DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYG 266 (325)
Q Consensus 188 ~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~-~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~ 266 (325)
+++|++||+|+||+|+.++||++|.++||.||+.+ +..++|.+++++|++++|+.+|||+++.||+++|+++++++||.
T Consensus 84 ~~vlk~GDiv~IDvg~~~dG~~~Dsa~T~~vg~~~~~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~ 163 (255)
T COG0024 84 KKVLKEGDIVKIDVGAHIDGYIGDTAITFVVGEVSDEDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFS 163 (255)
T ss_pred CcccCCCCEEEEEEEEEECCeeeeEEEEEECCCCChHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCE
Confidence 67899999999999999999999999999999766 47777999999999999999999999999999999999999999
Q ss_pred ccCCceeeecCCccccCCccccccCC-CCeeecCCcEEEEcceeeec
Q 020521 267 VVRQFVGHGIGRVFHADPVVLHYRNN-DHGRMVLNQTFTIGNIIFSF 312 (325)
Q Consensus 267 ~~~~~~GHGIG~~~he~P~i~~~~~~-~~~~L~~GMvftIEP~i~~~ 312 (325)
+++.|+|||||..+||.|.|+|+.+. ...+|++|||||||||++.+
T Consensus 164 vVr~~~GHgig~~~He~p~ip~y~~~~~~~~l~~Gmv~aIEPmi~~G 210 (255)
T COG0024 164 VVRNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEGMVFAIEPMINTG 210 (255)
T ss_pred EeecccCCccCcccCCCCeeccccCCCCCcccCCCCEEEEeeEEEcC
Confidence 99999999999999999999997654 34699999999999999985
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=5.9e-50 Score=368.40 Aligned_cols=216 Identities=31% Similarity=0.529 Sum_probs=202.7
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~ 187 (325)
..|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.++|+.....+|.+|+.++|+|+|+..+|+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 36999999999999999999999999999999999999999999999999998765567789999999999999999999
Q ss_pred CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCc
Q 020521 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (325)
Q Consensus 188 ~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~ 267 (325)
+++|++||+|.+|+++.++||++|++|||++|+++++++++|++++++++++++++|||++++||++++++++++.||..
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~GY~sD~tRT~~vG~~s~~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~ 161 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLNGGLSDSAWTYRVGKVSDEAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSV 161 (248)
T ss_pred CcccCCCCEEEEEeeEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCceeeecCCccccCCcccccc-CCCCeeecCCcEEEEcceee-----------------ecCcCcEEEEEEe
Q 020521 268 VRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIGNIIF-----------------SFQVANYKVDLVK 323 (325)
Q Consensus 268 ~~~~~GHGIG~~~he~P~i~~~~-~~~~~~L~~GMvftIEP~i~-----------------~~g~gGvrie~v~ 323 (325)
.++++|||||+.+||.|.+.++. .+++.+|++||||||||++| .+|.+|+|+||-.
T Consensus 162 ~~~~~GHgiGl~~hE~P~i~~~~~~~~~~~l~~Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv 235 (248)
T PRK12897 162 ARDFTGHGIGKEIHEEPAIFHFGKQGQGPELQEGMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTI 235 (248)
T ss_pred CCCeEECccCCcccCCCccCCCCCCCCCCCcCCCCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEE
Confidence 89999999999999999987543 24567999999999999999 3677899998854
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=100.00 E-value=2e-49 Score=372.58 Aligned_cols=209 Identities=37% Similarity=0.684 Sum_probs=197.1
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCC--CCCceeeecCCCCcccCC
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~--gfp~~v~sg~n~~~~hg~ 185 (325)
+.|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.+.|+.|+.++|. +||+++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 359999999999999999999999999999999999999999999999999988877775 599999999999999999
Q ss_pred CCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC
Q 020521 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (325)
Q Consensus 186 p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~ 265 (325)
|+++++++||+|.+|+++.++||++|++|||++|+++++++++|+++.++++++++.+|||++++||+++++++++++||
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~GY~aDitRT~~vG~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~ 200 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVDGYYGDCSRMVMIGEVSEIKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGF 200 (291)
T ss_pred CCCCccCCCCEEEEEEeEEECcEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcCc
Q 020521 266 GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVAN 316 (325)
Q Consensus 266 ~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gG 316 (325)
....+++|||||+.+||.|.+.++.++++.+|++||||+|||++|.++.+|
T Consensus 201 ~~~~~~~GHgIGl~~hE~P~i~~~~~~~~~~L~~GMV~~iEP~i~~~~~~g 251 (291)
T PRK12318 201 SVVDQFVGHGVGIKFHENPYVPHHRNSSKIPLAPGMIFTIEPMINVGKKEG 251 (291)
T ss_pred ccCCCcccCCcCccccCCCcccCcCCCCCCEeCCCCEEEECCEEEcCCCce
Confidence 988899999999999999999776555678999999999999999875544
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=1.3e-49 Score=372.48 Aligned_cols=217 Identities=26% Similarity=0.457 Sum_probs=201.6
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCC----CCCCceeeecCCCCccc
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECICH 183 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~----~gfp~~v~sg~n~~~~h 183 (325)
..|||++||+.||+|++|++++++++.+.++||+||.||++.++..+.+.|++|+.+++ .+||+++|+|.|+.++|
T Consensus 2 ~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~H 81 (286)
T PRK07281 2 ITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVAH 81 (286)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEeccccccC
Confidence 57999999999999999999999999999999999999999999999999999887765 35999999999999999
Q ss_pred CCCCCCcCCCCCeEEEEEee---------------------------eeCcEEEceeeEEEccCCCHHHHHHHHHHHHHH
Q 020521 184 GIPDSRALEDGDTINIDVTV---------------------------YLNGYHGDTSATFFCGDVDDEARNLVKVTKDCL 236 (325)
Q Consensus 184 g~p~~r~l~~GDiV~iD~g~---------------------------~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~ 236 (325)
+.|++++|++||+|+||+++ .|+||++|++|||++|+++++++++++++++++
T Consensus 82 ~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~gy~~D~~rT~~vG~~~~~~~~l~~~~~ea~ 161 (286)
T PRK07281 82 AFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYRGGLADSCWAYAVGTPSDEVKNLMDVTKEAM 161 (286)
T ss_pred CCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccCCEEeeeEEEEECCCCCHHHHHHHHHHHHHH
Confidence 99999999999999999997 489999999999999999999999999999999
Q ss_pred HHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeeecCCccccCCcccccc-CCCCeeecCCcEEEEcceeee----
Q 020521 237 HKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIGNIIFS---- 311 (325)
Q Consensus 237 ~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~-~~~~~~L~~GMvftIEP~i~~---- 311 (325)
+++++++|||++++||+++++++++++||+.+.+++|||||+.+||.|.+.++. .+.+.+|++||||||||++|.
T Consensus 162 ~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIGl~~hE~P~i~~~~~~~~~~~Le~GMV~tiEPgiy~~~~~ 241 (286)
T PRK07281 162 YRGIEQAVVGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVGPTMHEEPMVPNYGTAGRGLRLREGMVLTIEPMINTGTWE 241 (286)
T ss_pred HHHHHHhcCCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCCCccCCCCcCCCcccCCCCCEECCCCEEEECCeeEcCCcc
Confidence 999999999999999999999999999999888999999999999999987542 345679999999999999986
Q ss_pred --------------cCcCcEEEEEEee
Q 020521 312 --------------FQVANYKVDLVKL 324 (325)
Q Consensus 312 --------------~g~gGvrie~v~~ 324 (325)
+|.+|+|+||-.|
T Consensus 242 ~~~~~~~gw~~~~~~g~~gvr~Edtvl 268 (286)
T PRK07281 242 IDTDMKTGWAHKTLDGGLSCQYEHQFV 268 (286)
T ss_pred eecccCCCceEEecCCCcEEEeccEEE
Confidence 3456799998654
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=100.00 E-value=3.4e-48 Score=355.98 Aligned_cols=216 Identities=42% Similarity=0.695 Sum_probs=202.7
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCC
Q 020521 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (325)
Q Consensus 109 ~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~ 188 (325)
.|||++||++||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+...++.+||.++++|.|+..+|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988767777899999999999999999999
Q ss_pred CcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCcc
Q 020521 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV 268 (325)
Q Consensus 189 r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~ 268 (325)
++|++||+|.+|+++.|+||++|++|||++|+++++++++|+++.++++++++.+|||++++||+++++++++++||...
T Consensus 82 ~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~ 161 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYDGYHGDTAKTFLVGKISPEAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV 161 (247)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred CCceeeecCCccccCCcccccc-CCCCeeecCCcEEEEcceeeec-----------------CcCcEEEEEEee
Q 020521 269 RQFVGHGIGRVFHADPVVLHYR-NNDHGRMVLNQTFTIGNIIFSF-----------------QVANYKVDLVKL 324 (325)
Q Consensus 269 ~~~~GHGIG~~~he~P~i~~~~-~~~~~~L~~GMvftIEP~i~~~-----------------g~gGvrie~v~~ 324 (325)
.+++|||||+.+||.|.+.++. .+++.+|++||||||||++|.+ +.+|+||||-.|
T Consensus 162 ~~~~GHgiG~~~~e~p~i~~~~~~~~~~~l~~gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~ 235 (247)
T TIGR00500 162 REYCGHGIGRKFHEEPQIPNYGKKFTNVRLKEGMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIV 235 (247)
T ss_pred cCccCCccCcccCCCCccCCcCcCCCCCEecCCCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEE
Confidence 8899999999999999876543 2357899999999999999984 567999998764
No 8
>PRK05716 methionine aminopeptidase; Validated
Probab=100.00 E-value=2.3e-47 Score=351.06 Aligned_cols=217 Identities=45% Similarity=0.750 Sum_probs=203.5
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~ 187 (325)
..|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.++|+.+.+.++.+|+.++++|.|+..+|+.|+
T Consensus 3 ~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~~ 82 (252)
T PRK05716 3 ITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIPS 82 (252)
T ss_pred eeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCCC
Confidence 47999999999999999999999999999999999999999999999999998776667788889999999999999999
Q ss_pred CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCc
Q 020521 188 SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV 267 (325)
Q Consensus 188 ~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~ 267 (325)
+++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++|+..
T Consensus 83 ~~~l~~Gd~v~id~g~~~~gY~~d~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~ 162 (252)
T PRK05716 83 DKVLKEGDIVNIDVTVIKDGYHGDTSRTFGVGEISPEDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV 162 (252)
T ss_pred CcccCCCCEEEEEEEEEECCEEEEeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred cCCceeeecCCccccCCccccc-cCCCCeeecCCcEEEEcceeee-----------------cCcCcEEEEEEee
Q 020521 268 VRQFVGHGIGRVFHADPVVLHY-RNNDHGRMVLNQTFTIGNIIFS-----------------FQVANYKVDLVKL 324 (325)
Q Consensus 268 ~~~~~GHGIG~~~he~P~i~~~-~~~~~~~L~~GMvftIEP~i~~-----------------~g~gGvrie~v~~ 324 (325)
..+++|||||+.+||.|.+.++ ..+++.+|++||||+|||++|. ++.+|+||||..|
T Consensus 163 ~~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~ 237 (252)
T PRK05716 163 VREYCGHGIGRKFHEEPQIPHYGAPGDGPVLKEGMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVA 237 (252)
T ss_pred ecCccccccCCccCCCCccCcCCCCCCCCEecCCCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEE
Confidence 7889999999999999988654 2346789999999999999997 5778999999764
No 9
>PRK09795 aminopeptidase; Provisional
Probab=100.00 E-value=7.9e-48 Score=372.24 Aligned_cols=213 Identities=19% Similarity=0.304 Sum_probs=198.6
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc
Q 020521 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (325)
Q Consensus 104 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~h 183 (325)
+..+|.|||++||++||+|++|++++++.+.+.++||+||.||++.++..+.++|+.+. +|+++|++|.|...+|
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~~-----~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEKA-----SFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCcC-----CCCeEEEEeccccccC
Confidence 56789999999999999999999999999999999999999999999999999998763 5889999999999999
Q ss_pred CCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccC--CCHH---HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 020521 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGD--VDDE---ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (325)
Q Consensus 184 g~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~--~~~~---~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~ 258 (325)
+.|++++|++||+|++|+++.|+||++|++|||++|. ++++ ++++|+++.++++++++++|||++++||++++++
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~ 275 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQGYCSDMTRTLLVNGEGVSAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARR 275 (361)
T ss_pred CCCCCceecCCCEEEEEeccccCCEeecceEEEEeCCcCCchhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 9999999999999999999999999999999999963 3333 7899999999999999999999999999999999
Q ss_pred HHHHCCCCc-cCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 259 HADRYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 259 ~~~~~G~~~-~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
++++.||+. +.|.+|||||+++||.|.+.. +++.+|++||||||||++|.+++||+||||..|
T Consensus 276 ~~~~~g~~~~~~h~~GHgiGl~~he~p~i~~---~~~~~l~~gmv~~iEpgiy~~~~~gvriEd~v~ 339 (361)
T PRK09795 276 VITEAGYGDYFGHNTGHAIGIEVHEDPRFSP---RDTTTLQPGMLLTVEPGIYLPGQGGVRIEDVVL 339 (361)
T ss_pred HHHHcCCCccCCCCCCccCCccccCCCCcCC---CCCCCcCCCCEEEECCEEEeCCCCEEEEeeEEE
Confidence 999999986 578899999999999998853 357899999999999999999999999999654
No 10
>PRK12896 methionine aminopeptidase; Reviewed
Probab=100.00 E-value=2.5e-47 Score=351.49 Aligned_cols=219 Identities=38% Similarity=0.683 Sum_probs=203.7
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCC
Q 020521 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (325)
Q Consensus 106 ~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~ 185 (325)
+.+.|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+++..+.+||.++|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 34679999999999999999999999999999999999999999999999999998877778899999999999999999
Q ss_pred CCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC
Q 020521 186 PDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY 265 (325)
Q Consensus 186 p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~ 265 (325)
|++++|++||+|.+|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||++++++++++.||
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~ 165 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLDGYHGDTGITFAVGPVSEEAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGY 165 (255)
T ss_pred CCCccCCCCCEEEEEEeEEECcEEEeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCceeeecCCccccCCcccc-c-cCCCCeeecCCcEEEEcceee-----------------ecCcCcEEEEEEee
Q 020521 266 GVVRQFVGHGIGRVFHADPVVLH-Y-RNNDHGRMVLNQTFTIGNIIF-----------------SFQVANYKVDLVKL 324 (325)
Q Consensus 266 ~~~~~~~GHGIG~~~he~P~i~~-~-~~~~~~~L~~GMvftIEP~i~-----------------~~g~gGvrie~v~~ 324 (325)
....+++|||||+.+||.|.+.. + ..+++.+|++||||+|||+++ .++.+|+|+||-.|
T Consensus 166 ~~~~~~~GHgiG~~~he~p~~~~~~~~~~~~~~le~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~ 243 (255)
T PRK12896 166 SVVRDLTGHGVGRSLHEEPSVILTYTDPLPNRLLRPGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVV 243 (255)
T ss_pred EeccCcccCCcCcccccCCCccccCCCCCCCCEecCCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEE
Confidence 87789999999999999995543 2 134578999999999999998 46788999998764
No 11
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.9e-46 Score=364.05 Aligned_cols=215 Identities=24% Similarity=0.340 Sum_probs=201.8
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCc
Q 020521 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (325)
Q Consensus 102 ~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~ 181 (325)
..+.++|.|||++||+.||+|+++++.++..+.+.++||+||.||.+.++..+.+.|+... +|+++|++|.|.+.
T Consensus 146 ~~i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~~-----sf~~iv~~G~n~a~ 220 (384)
T COG0006 146 DLVDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEGP-----SFDTIVASGENAAL 220 (384)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCcc-----CcCcEEeccccccC
Confidence 3456789999999999999999999999999999999999999999999999999997542 48999999999999
Q ss_pred ccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 020521 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 261 (325)
Q Consensus 182 ~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~ 261 (325)
+|+.|+++.+++||+|+||+|+.|+|||+|+||||.+|+++++++++|+.+.++++++++++|||++++||+.++++++.
T Consensus 221 pH~~~~~~~~~~gd~vliD~G~~~~gY~sDiTRT~~~G~~~~~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~ 300 (384)
T COG0006 221 PHYTPSDRKLRDGDLVLIDLGGVYNGYCSDITRTFPIGKPSDEQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLE 300 (384)
T ss_pred cCCCCCcccccCCCEEEEEeeeEECCccccceeEEecCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCc-cCCceeeecC--CccccCCc-cccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 262 RYNYGV-VRQFVGHGIG--RVFHADPV-VLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 262 ~~G~~~-~~~~~GHGIG--~~~he~P~-i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
+.||+. +.|.+|||+| +++||.|. +.. +...+|+||||||+||++|.+|.+|+||||-.|
T Consensus 301 ~~g~~~~~~h~~GHgvG~~l~vhE~p~~~~~---~~~~~L~~GMv~t~Epg~y~~g~~GirIEd~vl 364 (384)
T COG0006 301 KAGYGLYFLHGTGHGVGFVLDVHEHPQYLSP---GSDTTLEPGMVFSIEPGIYIPGGGGVRIEDTVL 364 (384)
T ss_pred hcCCcccccCCccccCCCCcccCcCccccCC---CCCccccCCcEEEeccccccCCCceEEEEEEEE
Confidence 998886 5677999999 99999994 543 367899999999999999999999999999654
No 12
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=100.00 E-value=9.6e-45 Score=329.97 Aligned_cols=209 Identities=16% Similarity=0.178 Sum_probs=185.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCC-CCCCCCCceeeecCCCCcccCCCCCCcCCCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~-l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~G 194 (325)
|++||+|+++++++++++.+.++||+||.||++.+++.+.+.|+...+ ..+.++.+++++|.|+..+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 2222344678999999999999999999999
Q ss_pred CeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCcc-CCcee
Q 020521 195 DTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVV-RQFVG 273 (325)
Q Consensus 195 DiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~-~~~~G 273 (325)
|+|++|+++.++||++|++|||++|+++++++++++++.++++++++++|||++++||+++++++++++||... .+.+|
T Consensus 81 D~v~~d~g~~~~GY~ad~~RT~~vG~~~~~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~~~G 160 (228)
T cd01090 81 DILSLNCFPMIAGYYTALERTLFLDEVSDAHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTFGYG 160 (228)
T ss_pred CEEEEEEeEEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999864 56699
Q ss_pred eecCCccccCCcc--ccccCCCCeeecCCcEEEEcceeeec----CcCcEEEEEEee
Q 020521 274 HGIGRVFHADPVV--LHYRNNDHGRMVLNQTFTIGNIIFSF----QVANYKVDLVKL 324 (325)
Q Consensus 274 HGIG~~~he~P~i--~~~~~~~~~~L~~GMvftIEP~i~~~----g~gGvrie~v~~ 324 (325)
||||+..||.|.- .....+++.+|++||||||||++|.+ |.+|+|+||..|
T Consensus 161 HgiGl~~he~~~~~g~~~~~~~~~~Le~GMV~~iEP~i~~~~~~~g~gG~ried~v~ 217 (228)
T cd01090 161 HSFGVLSHYYGREAGLELREDIDTVLEPGMVVSMEPMIMLPEGQPGAGGYREHDILV 217 (228)
T ss_pred cccccccccCCCccccccCCCCCCccCCCCEEEECCEEeecccCCCCcEEEeeeEEE
Confidence 9999999997631 11123456899999999999999984 789999999854
No 13
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=2.2e-44 Score=328.67 Aligned_cols=209 Identities=47% Similarity=0.816 Sum_probs=196.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+..+++.+|+..+++|.|+..+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988778888998999999999999999999999999
Q ss_pred eEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeee
Q 020521 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHG 275 (325)
Q Consensus 196 iV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHG 275 (325)
+|.+|+++.++||++|++|||++|+++++++++++.+.++++++++++|||++++||++++++++++.|+....+++|||
T Consensus 81 ~v~id~g~~~~GY~ad~~RT~~~G~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~~~~~GHg 160 (238)
T cd01086 81 IVNIDVGVELDGYHGDSARTFIVGEVSEEAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVVREFGGHG 160 (238)
T ss_pred EEEEEEEEEECCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcceecCccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998778899999
Q ss_pred cCCccccCCcccc-ccCCCCeeecCCcEEEEcceeee-----------------cCcCcEEEEEEee
Q 020521 276 IGRVFHADPVVLH-YRNNDHGRMVLNQTFTIGNIIFS-----------------FQVANYKVDLVKL 324 (325)
Q Consensus 276 IG~~~he~P~i~~-~~~~~~~~L~~GMvftIEP~i~~-----------------~g~gGvrie~v~~ 324 (325)
||+.+||.|.+.. ...+++.+|++||||+|||++|. +|.+|+|+||..|
T Consensus 161 iG~~~~e~p~~~~~~~~~~~~~le~Gmv~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~ 227 (238)
T cd01086 161 IGRKFHEEPQIPNYGRPGTGPKLKPGMVFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVL 227 (238)
T ss_pred CCCccccCCCcCCccCCCCCCEecCCCEEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEE
Confidence 9999999998762 22346789999999999999996 5788999999764
No 14
>PRK15173 peptidase; Provisional
Probab=100.00 E-value=8.7e-45 Score=346.05 Aligned_cols=216 Identities=17% Similarity=0.288 Sum_probs=194.6
Q ss_pred CCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC
Q 020521 100 KPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE 179 (325)
Q Consensus 100 ~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~ 179 (325)
..+.+.++|.|||++||+.||+|+++++++++.+.+.++||+||.||++.++..+.+.|... +..| .++++|.+
T Consensus 85 ~~~~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~- 158 (323)
T PRK15173 85 SSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD- 158 (323)
T ss_pred hHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-
Confidence 33456789999999999999999999999999999999999999999999998888876532 1123 36677776
Q ss_pred CcccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH
Q 020521 180 CICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH 259 (325)
Q Consensus 180 ~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~ 259 (325)
..+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++++
T Consensus 159 ~~~h~~~~~~~l~~Gd~V~iD~g~~~~GY~aDitRT~~vG~p~~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~ 238 (323)
T PRK15173 159 FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEV 238 (323)
T ss_pred CccCCCCCCCccCCCCEEEEEeCccCCCEeeeeEEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHH
Confidence 56899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHCCCCc-cCCceeeecCC--ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 260 ADRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 260 ~~~~G~~~-~~~~~GHGIG~--~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
+++.|+.. ..+++|||||+ .+||.|.+.. +++.+|++||||||||++|.++.+|+||||..|
T Consensus 239 ~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~---~~~~~Le~GMV~tiEPgiy~~g~ggvriEDtvl 303 (323)
T PRK15173 239 IKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGYNLGSIMIEDMIL 303 (323)
T ss_pred HHHcCCccccCCCCCCcCCCCCCcCCCCCCCC---CCCCccCCCCEEEECCEEEcCCCcEEEEeeEEE
Confidence 99999974 56889999996 8899999864 356799999999999999999999999999765
No 15
>PRK14575 putative peptidase; Provisional
Probab=100.00 E-value=4e-44 Score=351.31 Aligned_cols=217 Identities=17% Similarity=0.276 Sum_probs=196.0
Q ss_pred CCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC
Q 020521 99 QKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN 178 (325)
Q Consensus 99 ~~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n 178 (325)
+..+.+.++|.|||++||+.||+|+++++++++++.+.++||+||.||++.++..+.+.|..+. ..| .++.+|.+
T Consensus 167 d~~~~l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~~----~~~-~~v~~G~~ 241 (406)
T PRK14575 167 DSSSIFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETHF----SRF-HLISVGAD 241 (406)
T ss_pred EcHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCcC----CcC-ceEEECCC
Confidence 3344466899999999999999999999999999999999999999999999999888776431 122 46777876
Q ss_pred CCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 020521 179 ECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (325)
Q Consensus 179 ~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~ 258 (325)
..+|+.|+++++++||+|.+|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||++++++
T Consensus 242 -~~~h~~~~~~~l~~Gd~v~iD~g~~~~GY~sditRT~~vG~~~~~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~ 320 (406)
T PRK14575 242 -FSPKLIPSNTKACSGDLIKFDCGVDVDGYGADIARTFVVGEPPEITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTME 320 (406)
T ss_pred -cccCCCCCCCcCCCCCEEEEEeceEECCEeeeeEEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHH
Confidence 5689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHCCCCc-cCCceeeecCC--ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 259 HADRYNYGV-VRQFVGHGIGR--VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 259 ~~~~~G~~~-~~~~~GHGIG~--~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
+++++||.. ..+++|||||. .+||.|++.+ +++.+|++||||||||++|.++.+|+||||..|
T Consensus 321 ~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~---~~~~~Le~GMv~tiEpgiy~~g~gGvriEDtvl 386 (406)
T PRK14575 321 VIKKSGLPNYNRGHLGHGNGVFLGLEESPFVST---HATESFTSGMVLSLETPYYGYNLGSIMIEDMIL 386 (406)
T ss_pred HHHHcCCccccCCCCCCcccCCCCCccCCCCCC---CCCCCcCCCCEEEECCeeecCCCcEEEEEeEEE
Confidence 999999975 46889999995 8999999874 356799999999999999999999999999754
No 16
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=100.00 E-value=6.4e-44 Score=326.85 Aligned_cols=202 Identities=23% Similarity=0.292 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
|++||+|+++++++++++.+.++||+||.||++.++..+.++|+.+ +|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred eEEEEEeeeeCcEEEceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC---------
Q 020521 196 TINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY--------- 265 (325)
Q Consensus 196 iV~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~--------- 265 (325)
+|++|+++.|+||++|++|||++ |+++++++++|+++.++++++++++|||++++||+++++++++++++
T Consensus 75 ~v~vD~g~~~~GY~ad~~Rt~~vgg~~~~~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~ 154 (243)
T cd01087 75 LVLIDAGAEYGGYASDITRTFPVNGKFTDEQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDV 154 (243)
T ss_pred EEEEEeCceECCEeeeeeEEEEeCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCch
Confidence 99999999999999999999999 69999999999999999999999999999999999999999986632
Q ss_pred ----------CccCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecC----------cCcEEEEEEee
Q 020521 266 ----------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQ----------VANYKVDLVKL 324 (325)
Q Consensus 266 ----------~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g----------~gGvrie~v~~ 324 (325)
..+.|.+|||||+++||.|.+.. ..+++.+|++||||+|||++|.++ .+|+|+||..|
T Consensus 155 ~~~~~~~~~~~~~~h~~GhgiGl~~~e~p~~~~-~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~ 232 (243)
T cd01087 155 DEIVESGAYAKFFPHGLGHYLGLDVHDVGGYLR-YLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVL 232 (243)
T ss_pred HhhhhhhhhhhhcCCCCccccCcccccCccccc-cCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEE
Confidence 22467799999999999997721 124678999999999999999998 79999999765
No 17
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=100.00 E-value=4e-44 Score=349.84 Aligned_cols=214 Identities=16% Similarity=0.183 Sum_probs=188.9
Q ss_pred CCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHH----CCCCCCCCCCCCCCceeeec
Q 020521 101 PIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID----NGAYPSPLGYGGFPKSVCTS 176 (325)
Q Consensus 101 ~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~----~G~~ps~l~~~gfp~~v~sg 176 (325)
.+.+.++|.|||++||++||+|++|++++++++.+.++||+||.||++.+...... .|+. +.+|.+++++|
T Consensus 149 ~~~~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~~-----~~~~~~iv~sG 223 (391)
T TIGR02993 149 TALVNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGGD-----YPAIVPLLPSG 223 (391)
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCCC-----cCCcccccccC
Confidence 34467889999999999999999999999999999999999999999988665432 1221 12366678899
Q ss_pred CCCCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 020521 177 VNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (325)
Q Consensus 177 ~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i 256 (325)
.|+..+|+.|+++++++||+|++|+++.|+||++|++|||++|+++++++++|+.+.++++++++++|||++++||++++
T Consensus 224 ~~~a~pH~~~~~~~l~~gd~v~iD~g~~~~GY~sD~tRT~~vG~p~~~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~ 303 (391)
T TIGR02993 224 ADASAPHLTWDDSPMKVGEGTFFEIAGCYKRYHCPLSRTVFLGKPTQAFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAF 303 (391)
T ss_pred ccccCCCCCCCCCcccCCCEEEEEeeeecccCccceeEEEEcCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHCCCCccCCceeeecCCccccC-----CccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 257 QDHADRYNYGVVRQFVGHGIGRVFHAD-----PVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 257 ~~~~~~~G~~~~~~~~GHGIG~~~he~-----P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
+++++++||.. .|++|||||+.+|+. |.+. .+++.+|++||||||||++|.++ +|+||||..|
T Consensus 304 ~~~~~~~G~~~-~h~~GhgiGl~~~~~~~e~~~~l~---~~~~~~L~~GMv~tvEpgiy~~~-~Gvried~v~ 371 (391)
T TIGR02993 304 FAVLKKYGIHK-DSRTGYPIGLSYPPDWGERTMSLR---PGDNTVLKPGMTFHFMTGLWMED-WGLEITESIL 371 (391)
T ss_pred HHHHHHcCCcc-CCCceeeeccCcCCCCCCcccccc---CCCCceecCCCEEEEcceeEeCC-CCeEEeeEEE
Confidence 99999999974 588999999998742 3443 23678999999999999999987 4899998643
No 18
>PRK10879 proline aminopeptidase P II; Provisional
Probab=100.00 E-value=7.7e-44 Score=352.13 Aligned_cols=213 Identities=17% Similarity=0.248 Sum_probs=191.6
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc
Q 020521 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (325)
Q Consensus 104 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~h 183 (325)
+.++|.|||++||+.||+|+++++.+++++++.++||+||.||++.+...+.++|+... +|+++|++|.|.+++|
T Consensus 167 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~~-----~~~~iv~~G~na~~~H 241 (438)
T PRK10879 167 VHEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARYP-----SYNTIVGSGENGCILH 241 (438)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCCC-----CCCcEEEEcCcccccc
Confidence 44689999999999999999999999999999999999999999999999999998532 4889999999999999
Q ss_pred CCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH-
Q 020521 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD- 261 (325)
Q Consensus 184 g~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~- 261 (325)
+.|++++|++||+|++|+|+.++||++|++|||++ |+++++++++|+++.++++++++++|||+++++|++++.+++.
T Consensus 242 ~~~~~~~l~~GDlVliD~G~~~~GY~sDitRT~~v~G~~s~~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~ 321 (438)
T PRK10879 242 YTENESEMRDGDLVLIDAGCEYKGYAGDITRTFPVNGKFTPAQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVS 321 (438)
T ss_pred CCCCccccCCCCEEEEEeCeEECCEEEEeEEEEEECCcCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 8999999999999999999999999999999999999886543
Q ss_pred -----------------HCCCCc-cCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCc---------
Q 020521 262 -----------------RYNYGV-VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQV--------- 314 (325)
Q Consensus 262 -----------------~~G~~~-~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~--------- 314 (325)
+.++.. +.|.+||+||+++||.|.+. .+.+.+|++||||||||++|.++.
T Consensus 322 ~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~~~~~---~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~ 398 (438)
T PRK10879 322 GLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDVGVYG---QDRSRILEPGMVLTVEPGLYIAPDADVPEQYRG 398 (438)
T ss_pred HHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcCCCcC---CCCCCcCCCCCEEEECCEEEECCCcCcccccCc
Confidence 344443 57889999999999988763 235679999999999999998642
Q ss_pred CcEEEEEEee
Q 020521 315 ANYKVDLVKL 324 (325)
Q Consensus 315 gGvrie~v~~ 324 (325)
+|+||||..|
T Consensus 399 ~GiRiED~Vl 408 (438)
T PRK10879 399 IGIRIEDDIV 408 (438)
T ss_pred cEEEeccEEE
Confidence 5999998754
No 19
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=100.00 E-value=6.1e-43 Score=311.69 Aligned_cols=201 Identities=26% Similarity=0.437 Sum_probs=189.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
|++||+|+++++.+++++.+.++||+||.||++.++..+.++|+++. +|++++++|.|+..+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~~-----~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEGP-----SFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC-----CCCcEEEECccccccCCCCCCcCcCCCC
Confidence 68999999999999999999999999999999999999999998743 5899999999999999999999999999
Q ss_pred eEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCc-cCCceee
Q 020521 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVGH 274 (325)
Q Consensus 196 iV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~GH 274 (325)
+|++|+++.++||++|++|||++|+++++++++++++.++++.+++.+|||++++||+++++++++++|+.. +.+.+||
T Consensus 76 ~v~id~g~~~~gy~~d~~RT~~~g~~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh 155 (208)
T cd01092 76 LVLIDFGAIYDGYCSDITRTVAVGEPSDELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGH 155 (208)
T ss_pred EEEEEeeeeECCEeccceeEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999864 4677999
Q ss_pred ecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 275 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 275 GIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
|||+.+||.|.+.. +++.+|++||||+|||+++.++++|+++||..|
T Consensus 156 ~iG~~~~e~p~i~~---~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~ 202 (208)
T cd01092 156 GVGLEVHEAPYISP---GSDDVLEEGMVFTIEPGIYIPGKGGVRIEDDVL 202 (208)
T ss_pred ccCcccCcCCCcCC---CCCCCcCCCCEEEECCeEEecCCCEEEeeeEEE
Confidence 99999999998753 467899999999999999999999999999865
No 20
>PRK14576 putative endopeptidase; Provisional
Probab=100.00 E-value=2.8e-43 Score=345.25 Aligned_cols=214 Identities=18% Similarity=0.240 Sum_probs=195.0
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCc
Q 020521 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (325)
Q Consensus 102 ~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~ 181 (325)
+.+.++|.|||++||+.||+|++++++++..+.+.++||+||.||++.++..+.+.|... +..| .++++|.| ..
T Consensus 169 ~~l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~ 242 (405)
T PRK14576 169 ALFNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FS 242 (405)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-cc
Confidence 346688999999999999999999999999999999999999999999999999887531 1123 57888888 56
Q ss_pred ccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH
Q 020521 182 CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD 261 (325)
Q Consensus 182 ~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~ 261 (325)
+|+.|+++++++||+|++|+++.++||++|++|||++|+++++++++|+++.++++++++++|||++++||+++++++++
T Consensus 243 ~h~~~~~~~l~~Gd~v~~d~g~~~~GY~sd~tRT~~~G~p~~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~ 322 (405)
T PRK14576 243 PKIIADTTPAKVGDLIKFDCGIDVAGYGADLARTFVLGEPDKLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIK 322 (405)
T ss_pred CCCCCCCcccCCCCEEEEEeceeECCEEeeeeEEEECCCCCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HCCCCc-cCCceeeecC--CccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 262 RYNYGV-VRQFVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 262 ~~G~~~-~~~~~GHGIG--~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
++||.. ..+++|||+| +.+||.|.+.. +++.+|++||||+|||++|.+|.+|+||||..|
T Consensus 323 ~~G~~~~~~~~~GHgiG~~l~~~e~P~i~~---~~~~~Le~GMv~~vEp~~y~~g~ggvriEDtvl 385 (405)
T PRK14576 323 TSGLPHYNRGHLGHGDGVFLGLEEVPFVST---QATETFCPGMVLSLETPYYGIGVGSIMLEDMIL 385 (405)
T ss_pred HcCCccccCCCCCCCCCCCCCcCcCCCcCC---CCCCccCCCCEEEECCceeecCCCEEEEeeEEE
Confidence 999975 4678999999 78999998753 356899999999999999999999999999653
No 21
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=100.00 E-value=1e-41 Score=309.21 Aligned_cols=201 Identities=14% Similarity=0.104 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCC--CcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CCcC
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pG--vTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~---~r~l 191 (325)
+.||.+..+ .++++.+.+.++|| +||.||++.+++++...|.++. .+|+++||+|+|++++|+.|+ +++|
T Consensus 5 ~~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l 79 (224)
T cd01085 5 AHIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKI 79 (224)
T ss_pred HHHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCccc
Confidence 346666655 59999999999999 9999999999988877765532 258999999999999999998 9999
Q ss_pred CCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhc-CCCCcHHHHHHHHHHHHHHCCCCccCC
Q 020521 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVC-APGMEYKKIGKTIQDHADRYNYGVVRQ 270 (325)
Q Consensus 192 ~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~-kPG~~~~dI~~~i~~~~~~~G~~~~~~ 270 (325)
++||+|++|+++.++||++|++|||++|+++++++++|+.+.+++.++++.+ +||+++.+|+++++++..+.|+. +.|
T Consensus 80 ~~GD~V~iD~g~~~~gY~aD~~RT~~vG~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~-~~h 158 (224)
T cd01085 80 SPDGLYLIDSGGQYLDGTTDITRTVHLGEPTAEQKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLD-YGH 158 (224)
T ss_pred CCCCEEEEEeCccCCCcccccEEeecCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCC-CCC
Confidence 9999999999999999999999999999999999999999999999999988 59999999999999999999986 668
Q ss_pred ceeeecC--CccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 271 FVGHGIG--RVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 271 ~~GHGIG--~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
++||||| +.+||.|.+. +..+++.+|++||||||||++|.+|.+|+|+||..|
T Consensus 159 ~~GHgIG~~l~~hE~P~i~-~~~~~~~~L~~GmvftiEP~iy~~g~~gvried~v~ 213 (224)
T cd01085 159 GTGHGVGSFLNVHEGPQSI-SPAPNNVPLKAGMILSNEPGYYKEGKYGIRIENLVL 213 (224)
T ss_pred CCCCCCCCCCcCCCCCCcC-CcCCCCCCcCCCCEEEECCEeEeCCCeEEEeeEEEE
Confidence 8999999 5889999874 223456899999999999999999999999998754
No 22
>PRK13607 proline dipeptidase; Provisional
Probab=100.00 E-value=4e-42 Score=339.79 Aligned_cols=215 Identities=14% Similarity=0.176 Sum_probs=182.1
Q ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcc
Q 020521 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (325)
Q Consensus 103 ~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~ 182 (325)
.+.++|.|||++||+.||+|+++++++++++.+.++||+||.||++.+.... ..++.. .+|++++++|.|++++
T Consensus 154 ~l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~ 227 (443)
T PRK13607 154 YLHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVL 227 (443)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEe
Confidence 4567899999999999999999999999999999999999999998654332 222211 2588999999999999
Q ss_pred cCCCCCC-cCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH-
Q 020521 183 HGIPDSR-ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA- 260 (325)
Q Consensus 183 hg~p~~r-~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~- 260 (325)
|+.|+++ .+++||+|++|+|+.++||++|++|||+ |+++++++++|+++.++++++++++|||++++||+.++.+++
T Consensus 228 H~~~~~~~~~~~Gd~vliD~Ga~~~GY~sDiTRTf~-g~~~~~~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~ 306 (443)
T PRK13607 228 HYTKLDHQAPAEMRSFLIDAGAEYNGYAADITRTYA-AKEDNDFAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIA 306 (443)
T ss_pred cCCccCCCCCCCCCEEEEEeeEEECCEEecceEEEe-cCCCHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHH
Confidence 9999875 6899999999999999999999999999 889999999999999999999999999999999999988766
Q ss_pred ---HHCCCC----------------ccCCceeeecCCccccCCccccc-------------cCCCCeeecCCcEEEEcce
Q 020521 261 ---DRYNYG----------------VVRQFVGHGIGRVFHADPVVLHY-------------RNNDHGRMVLNQTFTIGNI 308 (325)
Q Consensus 261 ---~~~G~~----------------~~~~~~GHGIG~~~he~P~i~~~-------------~~~~~~~L~~GMvftIEP~ 308 (325)
.+.|+. .+.|.+||+||+++||.+.+... .-....+|++||||||||+
T Consensus 307 ~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPG 386 (443)
T PRK13607 307 KLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAGFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPG 386 (443)
T ss_pred HHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCCcccccccccccccccccccccCCcCCCCcEEEECCe
Confidence 344443 25788999999999997543210 0013579999999999999
Q ss_pred eeecC-------------------------cCcEEEEEEee
Q 020521 309 IFSFQ-------------------------VANYKVDLVKL 324 (325)
Q Consensus 309 i~~~g-------------------------~gGvrie~v~~ 324 (325)
+|+++ .||+||||-.|
T Consensus 387 iY~~~~ll~~~~~~~~~~~in~~~i~~~~~~GGvRIED~vl 427 (443)
T PRK13607 387 LYFIDSLLAPLREGPFSKHFNWQKIDALKPFGGIRIEDNVV 427 (443)
T ss_pred eeeChhhhchhhhhhhhhhccHHHHHhhcCCCEEeecceEE
Confidence 99974 78999999654
No 23
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=100.00 E-value=1.6e-41 Score=303.01 Aligned_cols=200 Identities=27% Similarity=0.444 Sum_probs=182.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHH-HHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~-~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
|+||+|+++++++++++.+.++||+||.||++.+.+. +.++|.... +|++++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~-----~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEP-----AFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEE-----SSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcc-----cCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 566674432 4788999999999999999999999999
Q ss_pred eEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC-CccCCceee
Q 020521 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (325)
Q Consensus 196 iV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 274 (325)
+|.+|+++.++||++|++||+++| ++++++++++.++++++.+++.+|||++++||++++.+.++++|| ..+.+.+||
T Consensus 76 ~v~id~~~~~~gy~~d~~Rt~~~G-~~~~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~~~~GH 154 (207)
T PF00557_consen 76 IVIIDFGPRYDGYHADIARTFVVG-PTPEQRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYPHGLGH 154 (207)
T ss_dssp EEEEEEEEEETTEEEEEEEEEESS-SHHHHHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBTSSSEE
T ss_pred cceeeccceeeeeEeeeeeEEEEe-ecccccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceeeecccc
Confidence 999999999999999999999999 999999999999999999999999999999999999999999999 457889999
Q ss_pred ecCCccccC-CccccccCCCCeeecCCcEEEEcceee-ecCcCcEEEEEEee
Q 020521 275 GIGRVFHAD-PVVLHYRNNDHGRMVLNQTFTIGNIIF-SFQVANYKVDLVKL 324 (325)
Q Consensus 275 GIG~~~he~-P~i~~~~~~~~~~L~~GMvftIEP~i~-~~g~gGvrie~v~~ 324 (325)
|||+.+|+. |+|.+ .+++.+|++||||+|||+++ .++++|+++||..|
T Consensus 155 ~iG~~~~~~~P~i~~--~~~~~~l~~gmv~~iep~~~~~~~~~g~~~ed~v~ 204 (207)
T PF00557_consen 155 GIGLEFHEPGPNIAR--PGDDTVLEPGMVFAIEPGLYFIPGWGGVRFEDTVL 204 (207)
T ss_dssp EESSSSSEEEEEESS--TTTSSB--TTBEEEEEEEEEEETTSEEEEEBEEEE
T ss_pred cccccccccceeeec--ccccceecCCCceeEeeeEEccCCCcEEEEEEEEE
Confidence 999999997 99863 23678999999999999998 77999999999876
No 24
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=100.00 E-value=1.2e-39 Score=316.90 Aligned_cols=212 Identities=18% Similarity=0.305 Sum_probs=186.3
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCC----CCCCCCceeeecCCCCccc
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPL----GYGGFPKSVCTSVNECICH 183 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l----~~~gfp~~v~sg~n~~~~h 183 (325)
-.+|+++||+.||+|++|++++++.+.+.++||+|+.||++.+++++.+.++. ... .+.+|+..+|+++|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987653 221 1345555567789999999
Q ss_pred CCC--C--CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccC-----CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHH
Q 020521 184 GIP--D--SRALEDGDTINIDVTVYLNGYHGDTSATFFCGD-----VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGK 254 (325)
Q Consensus 184 g~p--~--~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~-----~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~ 254 (325)
++| + ++.|++||+|+||+|+.++||++|++|||+||+ ++++++++++++++|++++++.+|||++++||++
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~idGY~aD~arTv~vG~~~~~~~t~~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ 169 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHIDGFIALVAHTFVVGVAQEEPVTGRKADVIAAAHLAAEAALRLVKPGNTNTQVTE 169 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEECCEEEEEEEEEEECCcccccCCHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHH
Confidence 999 2 488999999999999999999999999999995 5678999999999999999999999999999999
Q ss_pred HHHHHHHHCCCCccCCceeeecCCcccc-CCcc-ccccC-----CCCeeecCCcEEEEcceeeecCcCcEEEEE
Q 020521 255 TIQDHADRYNYGVVRQFVGHGIGRVFHA-DPVV-LHYRN-----NDHGRMVLNQTFTIGNIIFSFQVANYKVDL 321 (325)
Q Consensus 255 ~i~~~~~~~G~~~~~~~~GHGIG~~~he-~P~i-~~~~~-----~~~~~L~~GMvftIEP~i~~~g~gGvrie~ 321 (325)
+++++++++||.++++++|||||..+|+ .|.| .++.. .....|++||||+|||+++. |.|.++..+
T Consensus 170 ai~~v~~~~G~~~v~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~~le~gev~aIEp~vs~-G~g~v~~~~ 242 (389)
T TIGR00495 170 AINKVAHSYGCTPVEGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTAEFEENEVYAVDILVST-GEGKAKDAD 242 (389)
T ss_pred HHHHHHHHcCCeecCCceeecccceeccCCCeeeecCCccccCCCCCCEecCCCEEEEeeeecC-CCceEEECC
Confidence 9999999999999999999999999998 7875 44421 23579999999999999998 466666543
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=100.00 E-value=2.6e-39 Score=285.44 Aligned_cols=200 Identities=24% Similarity=0.431 Sum_probs=187.2
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
|+.||+|+++++.+++.+.+.++||+||.||++.+++.+.++|+++ .|+.++++|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999944 3778888898889999999999999999
Q ss_pred eEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC-CccCCceee
Q 020521 196 TINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH 274 (325)
Q Consensus 196 iV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH 274 (325)
+|++|+++.++||++|++|||++|+++++++++++.+.++++.+++.+|||+++.||++++.++++++|+ ....+++||
T Consensus 75 ~v~~d~g~~~~gy~~d~~rt~~~g~~~~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~Gh 154 (207)
T cd01066 75 LVLVDLGGVYDGYHADLTRTFVIGEPSDEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTGH 154 (207)
T ss_pred EEEEEeceeECCCccceeceeEcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999998 456889999
Q ss_pred ecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 275 GIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 275 GIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
|||+.+||.|.+.. +.+.+|++||||+|||+++.++.+|+++||..+
T Consensus 155 ~iG~~~~e~~~~~~---~~~~~l~~gmv~~iep~~~~~~~~g~~~ed~v~ 201 (207)
T cd01066 155 GIGLEIHEPPVLKA---GDDTVLEPGMVFAVEPGLYLPGGGGVRIEDTVL 201 (207)
T ss_pred ccCcccCCCCCcCC---CCCCCcCCCCEEEECCEEEECCCcEEEeeeEEE
Confidence 99999999998542 356799999999999999999889999999865
No 26
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=100.00 E-value=1.8e-38 Score=311.58 Aligned_cols=203 Identities=23% Similarity=0.331 Sum_probs=179.0
Q ss_pred CCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHC----CCCCCCCCCCCCCceeeecCCCCc
Q 020521 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (325)
Q Consensus 106 ~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~----G~~ps~l~~~gfp~~v~sg~n~~~ 181 (325)
+.+..+|++||+.||+|++|++++++.+.+.++||+|+.||+..++..+.+. |+... .+||+ |+|.|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCccc
Confidence 3455689999999999999999999999999999999999999888866543 54322 36887 56799999
Q ss_pred ccCCCC---CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHH
Q 020521 182 CHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQD 258 (325)
Q Consensus 182 ~hg~p~---~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~ 258 (325)
+|++|+ +++|++||+|.||+|+.++||++|++|||++| ++++++++++++|++++|++++||++++||++++++
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vdGYiaD~ArTv~vg---~~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqe 298 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVNGRIIDCAFTVAFN---PKYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQE 298 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEECCEEEeEEEEEEeC---HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHH
Confidence 999995 78899999999999999999999999999997 688999999999999999999999999999999999
Q ss_pred HHHHCCCC---------ccCCceeeecCC-ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEE
Q 020521 259 HADRYNYG---------VVRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYK 318 (325)
Q Consensus 259 ~~~~~G~~---------~~~~~~GHGIG~-~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvr 318 (325)
+++++||. .+.+++|||||+ .+|+.|.++....++..+|++||||+|||+++. |.|-++
T Consensus 299 vies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~~~~LeeGmVfaIEPf~st-G~G~v~ 367 (470)
T PTZ00053 299 VIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGENTRMEEGELFAIETFAST-GRGYVN 367 (470)
T ss_pred HHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCCCCEecCCCEEEEcceeeC-CCCeEe
Confidence 99999974 368999999998 899987777665667789999999999999996 454443
No 27
>PRK08671 methionine aminopeptidase; Provisional
Probab=100.00 E-value=5.3e-38 Score=295.38 Aligned_cols=192 Identities=28% Similarity=0.518 Sum_probs=175.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CCcC
Q 020521 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (325)
Q Consensus 115 EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~---~r~l 191 (325)
+|+.||+|++|++++++.+.+.++||+|+.||++.+++.+.+.|+.++ ||+.+ +.|+..+|+.|. ++.|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998775 88654 567888999986 6889
Q ss_pred CCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCc
Q 020521 192 EDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF 271 (325)
Q Consensus 192 ~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~ 271 (325)
++||+|+||+|+.++||++|++||+++| +++++++++++++++++++.+|||++++||+++++++++++||..+.++
T Consensus 73 ~~GDvV~iD~G~~~dGY~aD~arT~~vG---~~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~~~~ 149 (291)
T PRK08671 73 PEGDVVKLDLGAHVDGYIADTAVTVDLG---GKYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPIRNL 149 (291)
T ss_pred CCCCEEEEEEeEEECCEEEEEEEEEEeC---hhHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCcccCCC
Confidence 9999999999999999999999999998 4788999999999999999999999999999999999999999988899
Q ss_pred eeeecCC-ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEE
Q 020521 272 VGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYK 318 (325)
Q Consensus 272 ~GHGIG~-~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvr 318 (325)
+|||||+ .+|+.|.|++...+++.+|++||||+|||+++. |.|.++
T Consensus 150 ~GHgiG~~~~he~p~ip~~~~~~~~~le~GmV~aIEp~~t~-G~G~v~ 196 (291)
T PRK08671 150 TGHGLERYELHAGPSIPNYDEGGGVKLEEGDVYAIEPFATD-GEGKVV 196 (291)
T ss_pred cccCcCCCcccCCCccCccCCCCCceeCCCCEEEEcceEEC-CCCeEe
Confidence 9999997 899999987765567889999999999998875 566554
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=100.00 E-value=1.2e-37 Score=293.36 Aligned_cols=195 Identities=27% Similarity=0.432 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CC
Q 020521 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (325)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~---~r 189 (325)
-+||+.||+|++|++++++.+.+.++||+|+.||++.++..+.++|+.++ ||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~a------Fp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEPA------FPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCCC------CCcce--ecCCEeeCCCCCCCcCc
Confidence 47999999999999999999999999999999999999999999999864 88765 478999999985 67
Q ss_pred cCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccC
Q 020521 190 ALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVR 269 (325)
Q Consensus 190 ~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~ 269 (325)
.|++||+|+||+|+.++||++|++|||++|+ ..+++++++++|++++++.+|||++++||+++++++++++||..+.
T Consensus 74 ~l~~GDvV~iD~G~~~dGY~aD~arT~~vG~---~~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i~ 150 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVDGYIADTAITVDLGD---QYDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPIS 150 (295)
T ss_pred cCCCCCEEEEEEeEEECCEEEEEEEEEEeCc---HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeeec
Confidence 8999999999999999999999999999985 3689999999999999999999999999999999999999999888
Q ss_pred CceeeecCC-ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEE
Q 020521 270 QFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKV 319 (325)
Q Consensus 270 ~~~GHGIG~-~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvri 319 (325)
+++|||||. ..|+.+.+++..+.++.+|++||||+|||+++. |.|.++-
T Consensus 151 ~~~GHgig~~~~h~g~~ip~i~~~~~~~le~GmV~aIEP~~~~-G~G~v~~ 200 (295)
T TIGR00501 151 NLTGHSMAPYRLHGGKSIPNVKERDTTKLEEGDVVAIEPFATD-GVGYVTD 200 (295)
T ss_pred CCCCcceecccccCCCccCeecCCCCCEeCCCCEEEEceeEEC-CcCeEec
Confidence 999999995 788886665544456789999999999998664 6666643
No 29
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=100.00 E-value=1.4e-37 Score=285.41 Aligned_cols=205 Identities=13% Similarity=0.187 Sum_probs=179.7
Q ss_pred HHHHHHHHHHHHHHHHHHhh-----hcCCC--CcHHHHHHHHHHHHHHCCCC-----CCCCCCCCCCceeeecCCC-Ccc
Q 020521 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAY-----PSPLGYGGFPKSVCTSVNE-CIC 182 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~-----~i~pG--vTe~eI~~~~~~~~~~~G~~-----ps~l~~~gfp~~v~sg~n~-~~~ 182 (325)
++.+|+|++++..+|+.... .|.+| +|+.+|+..++..+.+.+.. |+.+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999976655 89999 99999999999999988754 22222 3599999999999 899
Q ss_pred cCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 020521 183 HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (325)
Q Consensus 183 hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~ 262 (325)
|+.++++.++.||+|.+|+|++|+|||+|++|||++| ++++++++|+++.++++++++++|||++++||++++.+++++
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~gY~sditRT~~v~-p~~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~ 158 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYKSYCSNIARTFLID-PTSEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKK 158 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccCCEeecceEEEEcC-CCHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997 799999999999999999999999999999999999999999
Q ss_pred CCCCc---cCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceee-ecC---------cCcEEEEEEee
Q 020521 263 YNYGV---VRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIF-SFQ---------VANYKVDLVKL 324 (325)
Q Consensus 263 ~G~~~---~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~-~~g---------~gGvrie~v~~ 324 (325)
.+.+. +.+.+|||||+++||.|.+... .++.+|++||||+|||++| .++ .+|+||||-.|
T Consensus 159 ~~~~~~~~~~~~~GHgiGle~hE~~~~l~~--~~~~~L~~GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~ 231 (243)
T cd01091 159 KKPELEPNFTKNLGFGIGLEFRESSLIINA--KNDRKLKKGMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTIL 231 (243)
T ss_pred hChhHHHhCcCCcccccCcccccCccccCC--CCCCCcCCCCEEEEeCCcccccCccccCccCCeeEEEEEEEEE
Confidence 87544 3556999999999998865432 3468999999999999999 443 68999998653
No 30
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=100.00 E-value=4.3e-37 Score=279.54 Aligned_cols=205 Identities=21% Similarity=0.322 Sum_probs=172.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC--CCCC-CCCCCCCCceeeecCCCCcccCCC----CC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G--~~ps-~l~~~gfp~~v~sg~n~~~~hg~p----~~ 188 (325)
++.||+|++|++++++.+.+.++||+||.||+..++.++.+.. .++. ..++.+++...|++.|+..+|+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 3689999999999999999999999999999988887777742 2332 122223333344557999999996 78
Q ss_pred CcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCH-----HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC
Q 020521 189 RALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDD-----EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (325)
Q Consensus 189 r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~-----~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~ 263 (325)
++|++||+|+||+|+.|+||++|++|||++|++++ +++++++++.++++++++++|||++++||+++++++++++
T Consensus 81 ~~l~~Gd~v~iD~g~~~~GY~sD~tRT~~vG~~~~~~~~~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~ 160 (228)
T cd01089 81 YTLKDGDVVKIDLGCHIDGYIAVVAHTIVVGAEAETPVTGKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDY 160 (228)
T ss_pred cccCCCCEEEEEEEEEECCEEEEEEEEEEeCCcCccccchHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHc
Confidence 89999999999999999999999999999999875 8999999999999999999999999999999999999999
Q ss_pred CCCccCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 264 NYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 264 G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
||.++..+++|++|..++-.|.-. .-+..|++||||++||+++.+|.+++++|+-.+
T Consensus 161 G~~~~~~~~~h~~g~~~~~~~~~~----~~~~~l~~gmvf~~ep~~~~~g~~~~~~~~Tv~ 217 (228)
T cd01089 161 GCTPVEGVLSHQLKRVVSSGEGKA----KLVECVKHGLLFPYPVLYEKEGEVVAQFKLTVL 217 (228)
T ss_pred CCEEecCccccCcCceEecCCCCc----cchhhccCCcccccceeEccCCCeEEEEEEEEE
Confidence 998888899888888443322110 124689999999999999999999999998543
No 31
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=100.00 E-value=4.1e-37 Score=289.33 Aligned_cols=192 Identities=28% Similarity=0.495 Sum_probs=175.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCC---CCcCC
Q 020521 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (325)
Q Consensus 116 Ie~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~---~r~l~ 192 (325)
++.||+|+++++++++++.+.++||+|+.||++.+++.+.++|+.++ ||. ++|.|++.+|+.|. ++.|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998764 774 56899999999986 48999
Q ss_pred CCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCce
Q 020521 193 DGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFV 272 (325)
Q Consensus 193 ~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~ 272 (325)
+||+|.+|+|+.++||++|++|||.+|+ ++++++++++++++++++.+|||++++||+++++++++++||..+.+++
T Consensus 73 ~GDvV~iD~G~~~dGY~sD~arT~~vg~---~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~~~~~ 149 (291)
T cd01088 73 EGDVVKLDFGAHVDGYIADSAFTVDFDP---KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPIRNLT 149 (291)
T ss_pred CCCEEEEEEEEEECCEEEEEEEEEecCh---hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEeecCC
Confidence 9999999999999999999999999985 7889999999999999999999999999999999999999999888999
Q ss_pred eeecCC-ccccCCccccccCCCCeeecCCcEEEEcceeeecCcCcEEE
Q 020521 273 GHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVANYKV 319 (325)
Q Consensus 273 GHGIG~-~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gGvri 319 (325)
|||||. .+|+.|.|+.....++.+|++||||+|||+++. |.|.++.
T Consensus 150 GHgig~~~~h~~~~ip~~~~~~~~~le~gmV~aIEp~~s~-G~G~v~~ 196 (291)
T cd01088 150 GHSIERYRLHAGKSIPNVKGGEGTRLEEGDVYAIEPFATT-GKGYVHD 196 (291)
T ss_pred ccCccCccccCCCccCccCCCCCCEeCCCCEEEEceeEEC-CCCeeec
Confidence 999995 799988877665556789999999999998765 6776653
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-35 Score=279.22 Aligned_cols=208 Identities=18% Similarity=0.227 Sum_probs=190.8
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc
Q 020521 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (325)
Q Consensus 104 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~h 183 (325)
+.++|.|||+.|+++||+||.|+.+++-..+-.-|+...|..|++.++..+..+|+.-. .||+.|+.|.|....|
T Consensus 222 i~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~~-----AYpPVVAgG~na~tIH 296 (488)
T KOG2414|consen 222 IERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADRL-----AYPPVVAGGKNANTIH 296 (488)
T ss_pred HHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCcccc-----ccCCeeecCcccceEE
Confidence 45789999999999999999999999999999999999999999999999999999754 5999999999999999
Q ss_pred CCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCC--CCcHHHHHHHHHHHH
Q 020521 184 GIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAP--GMEYKKIGKTIQDHA 260 (325)
Q Consensus 184 g~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~e~~~~~i~~~kP--G~~~~dI~~~i~~~~ 260 (325)
+.-++..+.++|.|++|.|+.++||++|++|||.+ |..++.|++||+++...++..|+.|+| |.++.+|+....+.+
T Consensus 297 Y~~Nnq~l~d~emVLvDaGcelgGYvSDITRTWP~sGkFs~~Qr~LYeavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll 376 (488)
T KOG2414|consen 297 YVRNNQLLKDDEMVLVDAGCELGGYVSDITRTWPISGKFSDAQRDLYEAVLQVQEECIKYCKPSNGTSLSQLFERSNELL 376 (488)
T ss_pred EeecccccCCCcEEEEecCcccCceEccceeccCCCCccCcHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999 999999999999999999999999999 999999998877655
Q ss_pred HH----CCC------------CccCCceeeecCCccccCCccccccCCCCeeecCCcEEEEcceeeecCcC---------
Q 020521 261 DR----YNY------------GVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVA--------- 315 (325)
Q Consensus 261 ~~----~G~------------~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~g--------- 315 (325)
.+ .|. ..++|.+||-+|+++|+-|.+. .+..|+|||||||||++|.|..+
T Consensus 377 ~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGmDVHD~p~v~-----r~~pL~pg~ViTIEPGvYIP~d~d~P~~FrGI 451 (488)
T KOG2414|consen 377 GQELKELGIRKTDREEMIQAEKLCPHHVGHYLGMDVHDCPTVS-----RDIPLQPGMVITIEPGVYIPEDDDPPEEFRGI 451 (488)
T ss_pred HHHHHHhCcccchHHHHHhhhhcCCcccchhcCcccccCCCCC-----CCccCCCCceEEecCceecCccCCCchHhcCc
Confidence 43 332 2368999999999999999887 35689999999999999998765
Q ss_pred cEEEEE
Q 020521 316 NYKVDL 321 (325)
Q Consensus 316 Gvrie~ 321 (325)
|+||||
T Consensus 452 GiRIED 457 (488)
T KOG2414|consen 452 GIRIED 457 (488)
T ss_pred eEEeec
Confidence 999997
No 33
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=100.00 E-value=3.7e-32 Score=253.93 Aligned_cols=217 Identities=13% Similarity=0.168 Sum_probs=186.6
Q ss_pred CCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCc
Q 020521 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (325)
Q Consensus 102 ~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~ 181 (325)
|++.+.|.|||+.||+.||.|++|++++..+++++++||+.|.++...+......+|.--. .+|..++|+|.|..+
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 4567889999999999999999999999999999999999999999999999988876322 368899999999999
Q ss_pred ccC----CCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEc-cCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHH
Q 020521 182 CHG----IPDSRALEDGDTINIDVTVYLNGYHGDTSATFFC-GDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTI 256 (325)
Q Consensus 182 ~hg----~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i 256 (325)
.|+ .|+++.+|+||.+++|+|+.|.+|.+|++++|.. |+.+++|+.+|+++..++.++++++|||+.+.|++...
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~~yaSDITcsFP~nGKFTadqk~VYnaVLda~navm~a~KpGv~W~Dmh~La 332 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYHFYASDITCSFPVNGKFTADQKLVYNAVLDASNAVMEAMKPGVWWVDMHKLA 332 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCcceeeeecccceeccCCCccchhHHHHHHHHHHHHHHHHHhcCCCCccccHHHHH
Confidence 997 7999999999999999999999999999999999 99999999999999999999999999999999999877
Q ss_pred HHHH----HHCCC---------------CccCCceeeecCCccccCCccc-ccc-C--------CCCeeecCCcEEEEcc
Q 020521 257 QDHA----DRYNY---------------GVVRQFVGHGIGRVFHADPVVL-HYR-N--------NDHGRMVLNQTFTIGN 307 (325)
Q Consensus 257 ~~~~----~~~G~---------------~~~~~~~GHGIG~~~he~P~i~-~~~-~--------~~~~~L~~GMvftIEP 307 (325)
.+++ ++.|. ..++|-.||-+|+++|+-.-.+ .+. . ...+.|++|||+|+||
T Consensus 333 ~kvlle~laq~gIl~gdvd~m~~ar~~~vF~PHGLGH~lGlDvHDvGGyp~~~~rp~~P~l~~LR~aR~L~e~MviTvEP 412 (492)
T KOG2737|consen 333 EKVLLEHLAQMGILKGDVDEMVEARLGAVFMPHGLGHFLGLDVHDVGGYPEGVERPDEPGLRSLRTARHLKEGMVITVEP 412 (492)
T ss_pred HHHHHHHHHhcCceeccHHHHHHhccCeeeccccccccccccccccCCCCCCCCCCCcchhhhhhhhhhhhcCcEEEecC
Confidence 6544 33332 1257889999999999742111 111 1 1356899999999999
Q ss_pred eeee--------------------------cCcCcEEEEEE
Q 020521 308 IIFS--------------------------FQVANYKVDLV 322 (325)
Q Consensus 308 ~i~~--------------------------~g~gGvrie~v 322 (325)
+.|+ .+.|||||||=
T Consensus 413 GcYFi~~Ll~ealadp~~~~f~n~e~~~rfr~~GGVRIEdD 453 (492)
T KOG2737|consen 413 GCYFIDFLLDEALADPARAEFLNREVLQRFRGFGGVRIEDD 453 (492)
T ss_pred ChhHHHHHHHHHhcChHhhhhhhHHHHHHhhccCceEeecc
Confidence 9983 36799999973
No 34
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.90 E-value=3.3e-23 Score=204.25 Aligned_cols=216 Identities=14% Similarity=0.144 Sum_probs=182.0
Q ss_pred CCCCCccCCHHHHHHHHHHHHHHHHHHHHHhh----hcCCC--CcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeee-c
Q 020521 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT----LVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT-S 176 (325)
Q Consensus 104 ~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~----~i~pG--vTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~s-g 176 (325)
+..++++|+++|++.||.|----..|+-.... .+..| +||.+++..++++=..+..+-. .+|+++.++ |
T Consensus 301 i~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~G 376 (606)
T KOG2413|consen 301 ISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSVG 376 (606)
T ss_pred HHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccCC
Confidence 44567899999999999886555555544443 45566 8999999999988777765543 259999866 9
Q ss_pred CCCCcccCCCC---CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCC-CCcHHHH
Q 020521 177 VNECICHGIPD---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAP-GMEYKKI 252 (325)
Q Consensus 177 ~n~~~~hg~p~---~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kP-G~~~~dI 252 (325)
+|.++.|+.|. ++.+.+-.+.++|-|+.|.-=.+|++||+.+|+|++++++.|..+...+-+..++.-| |.....+
T Consensus 377 ~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~DGTTDvTRT~HfgePs~eek~~yT~VLkGhi~la~~vFP~~t~g~~l 456 (606)
T KOG2413|consen 377 PNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYLDGTTDVTRTVHFGEPTAEEKEAYTLVLKGHIALARAVFPKGTKGSVL 456 (606)
T ss_pred CCceeeecCCCccccceecCceEEEEccCcccccCccceeEEEecCCCCHHHHHHHHHHHHhhhHhhhcccCCCCCcchh
Confidence 99999999986 4589999999999999987778999999999999999999999999998888777654 7888888
Q ss_pred HHHHHHHHHHCCCCccCCceeeecCC--ccccCCcccccc-CCCCeeecCCcEEEEcceeeecCcCcEEEEEEee
Q 020521 253 GKTIQDHADRYNYGVVRQFVGHGIGR--VFHADPVVLHYR-NNDHGRMVLNQTFTIGNIIFSFQVANYKVDLVKL 324 (325)
Q Consensus 253 ~~~i~~~~~~~G~~~~~~~~GHGIG~--~~he~P~i~~~~-~~~~~~L~~GMvftIEP~i~~~g~gGvrie~v~~ 324 (325)
...++..+.+.|.. +.|-+|||||. .+||+|....++ -.+...|++||++++||+.|.+|.+|+|||+|++
T Consensus 457 D~laR~~LW~~gLD-y~HgTGHGVG~fLnVhE~P~~is~r~~~~~~~l~ag~~~s~EPGYY~dg~fGIRienv~~ 530 (606)
T KOG2413|consen 457 DALARSALWKAGLD-YGHGTGHGVGSFLNVHEGPIGIGYRPYSSNFPLQAGMVFSIEPGYYKDGEFGIRIENVVE 530 (606)
T ss_pred HHHHHHHHHhhccc-cCCCCCcccccceEeccCCceeeeeecCCCchhcCceEeccCCcccccCcceEEEeeEEE
Confidence 88899999999986 78889999998 689999766555 2356789999999999999999999999999985
No 35
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=99.85 E-value=8.5e-21 Score=189.93 Aligned_cols=209 Identities=17% Similarity=0.272 Sum_probs=171.9
Q ss_pred CccCCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHH-----hhhcCCC--CcHHHHHHHHHHHHHHC----CCCCCC
Q 020521 95 YVNSQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDN----GAYPSP 163 (325)
Q Consensus 95 y~~~~~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~-----~~~i~pG--vTe~eI~~~~~~~~~~~----G~~ps~ 163 (325)
|...++.-.+..+..||++.||+.+|+|++++...|... .++|..| +|...+...+..++.+. |..|..
T Consensus 122 fn~vDis~~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~ 201 (960)
T KOG1189|consen 122 FNKVDISLGLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDL 201 (960)
T ss_pred CceeehhhhhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccc
Confidence 333344444667889999999999999999999999733 3455555 67788888888777654 344443
Q ss_pred CCCCCCCceeeecCCCCcc-cCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHh
Q 020521 164 LGYGGFPKSVCTSVNECIC-HGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISV 242 (325)
Q Consensus 164 l~~~gfp~~v~sg~n~~~~-hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~ 242 (325)
+..+ ||+++.+|.+..+- ....+++.| + +|...+|.+|++||++++|||+| .|+.++++.|+....+++++++.
T Consensus 202 ~d~c-Y~PIiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~RynsYCSNv~RT~Li-dpssemq~nY~fLl~aqe~il~~ 276 (960)
T KOG1189|consen 202 LDMC-YPPIIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYNSYCSNVSRTYLI-DPSSEMQENYEFLLAAQEEILKL 276 (960)
T ss_pred cccc-cChhhhcCCccccccccccccccc--c-eEEeeccchhhhhhccccceeee-cchHHHHHHHHHHHHHHHHHHHh
Confidence 4444 89999999886553 344667777 4 88889999999999999999999 78999999999999999999999
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCccCCc---eeeecCCccccCCccccccCCCCeeecCCcEEEEcceee
Q 020521 243 CAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNIIF 310 (325)
Q Consensus 243 ~kPG~~~~dI~~~i~~~~~~~G~~~~~~~---~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~ 310 (325)
||||+..++||.++.+++++.+...+..| .|.|||++|.|..++.+.. ++.+|++||||.|.-++.
T Consensus 277 lrpG~ki~dVY~~~l~~v~k~~Pel~~~~~k~lG~~iGlEFREssl~inaK--nd~~lk~gmvFni~lGf~ 345 (960)
T KOG1189|consen 277 LRPGTKIGDVYEKALDYVEKNKPELVPNFTKNLGFGIGLEFRESSLVINAK--NDRVLKKGMVFNISLGFS 345 (960)
T ss_pred hcCCCchhHHHHHHHHHHHhcCcchhhhhhhhcccccceeeeccccccccc--chhhhccCcEEEEeeccc
Confidence 99999999999999999999998876555 9999999999998877653 458999999999987764
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=99.76 E-value=1.4e-17 Score=152.27 Aligned_cols=192 Identities=23% Similarity=0.387 Sum_probs=161.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHH----HHCCCCCCCCCCCCCCceeeecCCCCcccCCC
Q 020521 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (325)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~----~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p 186 (325)
-..+...-+|+|+++.+++-+++.+.|+||||..||+..++... .+.|.... -+||+. .|.|.|..|++|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 34566778999999999999999999999999999999887643 34443322 358865 568999999998
Q ss_pred C---CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC
Q 020521 187 D---SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY 263 (325)
Q Consensus 187 ~---~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~ 263 (325)
+ ..+|+..|++.||+|...+|-..|++-|+.+ ++....|+.+++++...+|+...-.++++||+++|+++++.+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~GrIiDsAFTv~F---~p~~d~Ll~AvreaT~tGIkeaGiDvRlcdiG~aiqEVmeSy 230 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHIDGRIIDSAFTVAF---NPKYDPLLAAVREATNTGIKEAGIDVRLCDIGEAIQEVMESY 230 (397)
T ss_pred CCCCceeeeecceEEEeccccccCeEeeeeeEEee---CccccHHHHHHHHHHhhhhhhcCceeeehhhhHHHHHHhhhe
Confidence 5 4689999999999999999999999999998 456778999999999999999999999999999999999997
Q ss_pred CCC-------c--cCCceeeecCC-ccccCCccccccCCCCeeecCCcEEEEcceeee
Q 020521 264 NYG-------V--VRQFVGHGIGR-VFHADPVVLHYRNNDHGRMVLNQTFTIGNIIFS 311 (325)
Q Consensus 264 G~~-------~--~~~~~GHGIG~-~~he~P~i~~~~~~~~~~L~~GMvftIEP~i~~ 311 (325)
... + ++++.||+|+. .+|..-.++...+++.+.|++|..|+||.+-+.
T Consensus 231 EvEi~Gk~~~VKpIrnLnGHSI~~yrIH~gksVPiVkgge~trmee~e~yAIETFgST 288 (397)
T KOG2775|consen 231 EVEINGKTYQVKPIRNLNGHSIAQYRIHGGKSVPIVKGGEQTRMEEGEIYAIETFGST 288 (397)
T ss_pred EEEeCCceecceeccccCCCcccceEeecCcccceecCCcceeecCCeeEEEEeeccC
Confidence 432 2 67899999998 577765665555668899999999999987665
No 37
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.72 E-value=1.5e-16 Score=148.86 Aligned_cols=203 Identities=18% Similarity=0.352 Sum_probs=164.8
Q ss_pred CccCCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC--CCCC-CCCC--CCCCceeeecCCCCcc
Q 020521 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGY--GGFPKSVCTSVNECIC 182 (325)
Q Consensus 108 r~vKs~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G--~~ps-~l~~--~gfp~~v~sg~n~~~~ 182 (325)
-.|-++..+..+|.|++|+..+++.+.++++||.+..||+.....++.+.- .|-. .-.+ -.||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 357788999999999999999999999999999999999999988887652 2322 1111 23665 678999999
Q ss_pred cCCCC----CCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCC-----CHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHH
Q 020521 183 HGIPD----SRALEDGDTINIDVTVYLNGYHGDTSATFFCGDV-----DDEARNLVKVTKDCLHKAISVCAPGMEYKKIG 253 (325)
Q Consensus 183 hg~p~----~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~-----~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~ 253 (325)
|+.|- +..|++||+|.||+|+++|||.+.++.|++|+.+ +....+++.+++-|.+++++.++||.+-.+|-
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiDGfiA~vaHT~VV~~~~~~~vtG~kADvI~AAh~A~eaa~rllkpgn~n~~vT 170 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHIDGFIALVAHTIVVGPAPDTPVTGRKADVIAAAHLAAEAALRLLKPGNTNTQVT 170 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeeccceeeeeeeEEeccCCCCcccCchhHHHHHHHHHHHHHHHHhCCCCCCchhh
Confidence 99872 5789999999999999999999999999999854 45678999999999999999999999999999
Q ss_pred HHHHHHHHHCCCCccCCceeeecCCcccc-CCc-cccccC-----CCCeeecCCcEEEEcceeeec
Q 020521 254 KTIQDHADRYNYGVVRQFVGHGIGRVFHA-DPV-VLHYRN-----NDHGRMVLNQTFTIGNIIFSF 312 (325)
Q Consensus 254 ~~i~~~~~~~G~~~~~~~~GHGIG~~~he-~P~-i~~~~~-----~~~~~L~~GMvftIEP~i~~~ 312 (325)
+++.+.+.++++..+....-|..=..+-+ .+. |.+... .+...++++.|+.+....+.+
T Consensus 171 ~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~~e~~~fe~~Evya~Di~~stg 236 (398)
T KOG2776|consen 171 RAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKEHEKTEFEEHEVYAIDILVSTG 236 (398)
T ss_pred HHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhccccccccccceeEEEEEEEecC
Confidence 99999999999987766666665554333 233 333211 145688999999998777663
No 38
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=99.62 E-value=2.4e-15 Score=148.63 Aligned_cols=207 Identities=17% Similarity=0.192 Sum_probs=156.7
Q ss_pred CCCCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHhh----hcCCC--CcHHHHHHHHHHHHHHCCC------CCC---
Q 020521 98 SQKPIGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGT----LVKPG--ITTDEIDKAVHQMIIDNGA------YPS--- 162 (325)
Q Consensus 98 ~~~~~~~~~~r~vKs~~EIe~mR~A~~ia~~~l~~~~~----~i~pG--vTe~eI~~~~~~~~~~~G~------~ps--- 162 (325)
.++.-.+..+-.+|+.+||+.+|.+++.....|+...+ .+..+ +|...+...+...+-+-.. .-+
T Consensus 158 ~DvslgLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~ 237 (1001)
T COG5406 158 SDVSLGLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDID 237 (1001)
T ss_pred hhhhhhhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccc
Confidence 34444456778999999999999999999999984432 22222 4445555444443322111 111
Q ss_pred --CCCCCCCCceeeecCCCCc-ccCCCCCCcCCCCCeEEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHH
Q 020521 163 --PLGYGGFPKSVCTSVNECI-CHGIPDSRALEDGDTINIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKA 239 (325)
Q Consensus 163 --~l~~~gfp~~v~sg~n~~~-~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~ 239 (325)
.|.++ |.+++.+|..--+ +-.+..++.+ .||.|...+|.+|+|||++++||+++ +|+.++++.|+.++.++...
T Consensus 238 ~d~lew~-ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn~YCSn~~RT~l~-dp~~e~~~Ny~fl~~lQk~i 314 (1001)
T COG5406 238 LDQLEWC-YTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYNGYCSNMSRTILT-DPDSEQQKNYEFLYMLQKYI 314 (1001)
T ss_pred hhhhhhh-cchhhccCceeecccccccCchhh-cCceEEEEeeeeeccccccccceEEe-CCchHhhhhHHHHHHHHHHH
Confidence 12222 6778888765322 2233344444 58999999999999999999999999 78999999999999999999
Q ss_pred HHhcCCCCcHHHHHHHHHHHHHHCCCCccCCc---eeeecCCccccCCccccccCCCCeeecCCcEEEEccee
Q 020521 240 ISVCAPGMEYKKIGKTIQDHADRYNYGVVRQF---VGHGIGRVFHADPVVLHYRNNDHGRMVLNQTFTIGNII 309 (325)
Q Consensus 240 i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~---~GHGIG~~~he~P~i~~~~~~~~~~L~~GMvftIEP~i 309 (325)
+..||||...++||..+.+++.+.|....++| +|-+||+.+.+...+.+..| +++|+.||+|.|.-++
T Consensus 315 ~~~~rpG~~~g~iY~~~~~yi~~~~pel~pnF~~nvG~~igiefR~s~~~~nvkn--~r~lq~g~~fnis~gf 385 (1001)
T COG5406 315 LGLVRPGTDSGIIYSEAEKYISSNGPELGPNFIYNVGLMIGIEFRSSQKPFNVKN--GRVLQAGCIFNISLGF 385 (1001)
T ss_pred HhhcCCCCCchhHHHHHHHHHHhcCCccCchHhhhhhhhccccccccccceeccC--CceeccccEEEEeecc
Confidence 99999999999999999999999998877777 89999999999877776543 4899999999997655
No 39
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=97.49 E-value=0.0018 Score=56.40 Aligned_cols=102 Identities=21% Similarity=0.260 Sum_probs=74.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCe
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDi 196 (325)
+.++++.+.+.++++.+.+.++||++..||...+++.+.++|.........| ..+.....+...-...++.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~~~~G--h~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFGHRTG--HGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCCCCCc--cccCcccCCCCCcCCCCCCCcCCCCE
Confidence 5788899999999999999999999999999999999999987421111111 11112122211111124678999999
Q ss_pred EEEEEeeeeC-cEEEceeeEEEccC
Q 020521 197 INIDVTVYLN-GYHGDTSATFFCGD 220 (325)
Q Consensus 197 V~iD~g~~~~-GY~~D~sRT~~vG~ 220 (325)
+.++.+.+.. ++..-+..|++|.+
T Consensus 180 ~~iep~~~~~~~~g~~~ed~v~vt~ 204 (207)
T cd01066 180 FAVEPGLYLPGGGGVRIEDTVLVTE 204 (207)
T ss_pred EEECCEEEECCCcEEEeeeEEEEeC
Confidence 9999999887 58888999999853
No 40
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.24 E-value=0.0042 Score=54.87 Aligned_cols=100 Identities=23% Similarity=0.277 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CCCcCCCCC
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 195 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p-~~r~l~~GD 195 (325)
+.+|++.+.+.++++.+.+.++||++..||.+.+++.+.++|..+......|+. +.....+. +.-.+ ++++|++|.
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~~~~~~Gh~--iG~~~~e~-p~i~~~~~~~l~~gm 179 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEYFIHRTGHG--VGLEVHEA-PYISPGSDDVLEEGM 179 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCccccCCCCCccc--cCcccCcC-CCcCCCCCCCcCCCC
Confidence 366788899999999999999999999999999999999999643211111111 11111111 11112 467899999
Q ss_pred eEEEEEeeeeCcE-EEceeeEEEcc
Q 020521 196 TINIDVTVYLNGY-HGDTSATFFCG 219 (325)
Q Consensus 196 iV~iD~g~~~~GY-~~D~sRT~~vG 219 (325)
++.|+.+.+..|+ -.-+..|++|.
T Consensus 180 v~~iep~~~~~~~~g~~~ed~v~vt 204 (208)
T cd01092 180 VFTIEPGIYIPGKGGVRIEDDVLVT 204 (208)
T ss_pred EEEECCeEEecCCCEEEeeeEEEEC
Confidence 9999998876554 34467888874
No 41
>PLN03158 methionine aminopeptidase; Provisional
Probab=97.20 E-value=0.0017 Score=63.96 Aligned_cols=106 Identities=9% Similarity=0.114 Sum_probs=74.0
Q ss_pred EEEceeeEEEccCCC--HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC-CccCCceee--ecCCcccc
Q 020521 208 YHGDTSATFFCGDVD--DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH--GIGRVFHA 282 (325)
Q Consensus 208 Y~~D~sRT~~vG~~~--~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH--GIG~~~he 282 (325)
.+.++.++..|..+. +.+|++.+.+.++++++.+.+|||++-.||.+++++.+.++|. .....+.+. .+.....
T Consensus 127 ~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvTe~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N- 205 (396)
T PLN03158 127 PNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVTTDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVN- 205 (396)
T ss_pred cccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCccccccccCCCceeeeccc-
Confidence 356777888886655 5678899999999999999999999999999999998877763 211111111 0111111
Q ss_pred CCccccccCCCCeeecCCcEEEEcceeeecCcCc
Q 020521 283 DPVVLHYRNNDHGRMVLNQTFTIGNIIFSFQVAN 316 (325)
Q Consensus 283 ~P~i~~~~~~~~~~L~~GMvftIEP~i~~~g~gG 316 (325)
..+.|+.. ++.+|++|+++.|+.+.+..|..+
T Consensus 206 -~~i~Hgip-~~r~L~~GDiV~iDvg~~~~GY~a 237 (396)
T PLN03158 206 -EVICHGIP-DARKLEDGDIVNVDVTVYYKGCHG 237 (396)
T ss_pred -ccccCCCC-CCccCCCCCEEEEEEeEEECCEEE
Confidence 12344322 457899999999999998876543
No 42
>PRK05716 methionine aminopeptidase; Validated
Probab=97.05 E-value=0.0074 Score=55.26 Aligned_cols=100 Identities=18% Similarity=0.191 Sum_probs=69.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccC-C-CCCCcCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-I-PDSRALED 193 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~--~~hg-~-p~~r~l~~ 193 (325)
..|++.+.+.++.+++.+.++||++-.||.+.+++.+.++|..+. ..+.|+. +.....+. +.++ . .++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~~-~~~~GHg--iG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSVV-REYCGHG--IGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCccccc--cCCccCCCCccCcCCCCCCCCEecC
Confidence 356677788888999999999999999999999999999987652 2222222 11111111 1111 1 24678999
Q ss_pred CCeEEEEEeeee------------------CcEEEceeeEEEccC
Q 020521 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (325)
Q Consensus 194 GDiV~iD~g~~~------------------~GY~~D~sRT~~vG~ 220 (325)
|.++.|+.+.+. +++..-+..|++|.+
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt~ 240 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVTE 240 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEcC
Confidence 999999988764 335666788898854
No 43
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=96.94 E-value=0.013 Score=53.53 Aligned_cols=100 Identities=19% Similarity=0.112 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccCC--CCCCcCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI--PDSRALED 193 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~--~~hg~--p~~r~l~~ 193 (325)
..|++..++.++++.+.+.++||+|-.||...+++.+.+.|..+. ..+.|+ .+.....+. +..+. .++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~~GH--giG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REYCGH--GIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCccCC--ccCcccCCCCccCCcCcCCCCCEecC
Confidence 356777888888999999999999999999999999999987542 122222 122222221 11111 23678999
Q ss_pred CCeEEEEEeeee------------------CcEEEceeeEEEccC
Q 020521 194 GDTINIDVTVYL------------------NGYHGDTSATFFCGD 220 (325)
Q Consensus 194 GDiV~iD~g~~~------------------~GY~~D~sRT~~vG~ 220 (325)
|.++.|+-+.+. +++..-+..|++|.+
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt~ 238 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVITD 238 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEcC
Confidence 999999988765 235556778888843
No 44
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.93 E-value=0.0045 Score=57.25 Aligned_cols=92 Identities=13% Similarity=0.090 Sum_probs=66.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCc-cCCcee--eecCCccccCCccccccCCCCeeecC
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGV-VRQFVG--HGIGRVFHADPVVLHYRNNDHGRMVL 299 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~-~~~~~G--HGIG~~~he~P~i~~~~~~~~~~L~~ 299 (325)
+..|++-+.+.++++.+.+.++||++..||.+.++++++++|.-. ..++-| -.+...+.| .+.|+-++++.+|++
T Consensus 12 ek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe--~v~HgiP~d~~vlk~ 89 (255)
T COG0024 12 EKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNE--VVAHGIPGDKKVLKE 89 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhh--eeeecCCCCCcccCC
Confidence 346777788889999999999999999999999999999865431 111111 223333332 234443346789999
Q ss_pred CcEEEEcceeeecCcCc
Q 020521 300 NQTFTIGNIIFSFQVAN 316 (325)
Q Consensus 300 GMvftIEP~i~~~g~gG 316 (325)
|.++.|.-++...|+.|
T Consensus 90 GDiv~IDvg~~~dG~~~ 106 (255)
T COG0024 90 GDIVKIDVGAHIDGYIG 106 (255)
T ss_pred CCEEEEEEEEEECCeee
Confidence 99999999999877643
No 45
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.93 E-value=0.0051 Score=58.07 Aligned_cols=84 Identities=13% Similarity=0.179 Sum_probs=63.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeeecCCccccCCccccccC--CCCeeecCC
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMVLN 300 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~--~~~~~L~~G 300 (325)
+..+++.+.+.++++++++.++||++..||.+.+++.+.+.|.. . ++.++....+ ...|+.. +++.+|++|
T Consensus 2 ~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~--~---afp~~is~n~--~~~H~~p~~~d~~~l~~G 74 (291)
T cd01088 2 EKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAG--P---AFPVNLSINE--CAAHYTPNAGDDTVLKEG 74 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCC--C---CCCceeccCC--EeeCCCCCCCCCcccCCC
Confidence 35788999999999999999999999999999999999998854 1 2222232222 2334432 245789999
Q ss_pred cEEEEcceeeecC
Q 020521 301 QTFTIGNIIFSFQ 313 (325)
Q Consensus 301 MvftIEP~i~~~g 313 (325)
+++.|+.+....|
T Consensus 75 DvV~iD~G~~~dG 87 (291)
T cd01088 75 DVVKLDFGAHVDG 87 (291)
T ss_pred CEEEEEEEEEECC
Confidence 9999999988755
No 46
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=96.88 E-value=0.018 Score=52.31 Aligned_cols=102 Identities=19% Similarity=0.189 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcc-cCCC-CCCcCCCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC-HGIP-DSRALEDGD 195 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~-hg~p-~~r~l~~GD 195 (325)
.+|++.+.+.++.+.+.+.++||++-.||.+.+++.+.+.|.... ..+.|+.-.........+. +..+ ++.+|++|.
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~~-~~~~GHgiG~~~~e~p~~~~~~~~~~~~~le~Gm 187 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSVV-REFGGHGIGRKFHEEPQIPNYGRPGTGPKLKPGM 187 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCccee-cCccccCCCCccccCCCcCCccCCCCCCEecCCC
Confidence 356788888899999999999999999999999999999987542 2222222111111111111 2223 367899999
Q ss_pred eEEEEEeeee------------------CcEEEceeeEEEccC
Q 020521 196 TINIDVTVYL------------------NGYHGDTSATFFCGD 220 (325)
Q Consensus 196 iV~iD~g~~~------------------~GY~~D~sRT~~vG~ 220 (325)
++.++.+.++ +.+..-+..|++|.+
T Consensus 188 v~~iep~i~~~~~~~~~~~~~~~~~~~~g~~g~~~edtv~Vte 230 (238)
T cd01086 188 VFTIEPMINLGTYEVVTLPDGWTVVTKDGSLSAQFEHTVLITE 230 (238)
T ss_pred EEEEeeEEECCCCceEECCCCCEEEcCCCCEEEeeeeEEEEcC
Confidence 9999988875 224455677888854
No 47
>PRK15173 peptidase; Provisional
Probab=96.82 E-value=0.015 Score=55.82 Aligned_cols=103 Identities=13% Similarity=0.116 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeE
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTI 197 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV 197 (325)
..|++.+++.++.+.+.+.++||++-.||+..+.+.+.+.|.......+.|..-....|.++.-.-...++.+|++|.++
T Consensus 203 ~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~E~P~i~~~~~~~Le~GMV~ 282 (323)
T PRK15173 203 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVL 282 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcCCCCCCcCCCCCCCCCCCCccCCCCEE
Confidence 45778888999999999999999999999999999999988632211111111111123332211111245789999999
Q ss_pred EEEEeeeeCcE-EEceeeEEEccC
Q 020521 198 NIDVTVYLNGY-HGDTSATFFCGD 220 (325)
Q Consensus 198 ~iD~g~~~~GY-~~D~sRT~~vG~ 220 (325)
.|+-+.+..|. -.-+..|++|.+
T Consensus 283 tiEPgiy~~g~ggvriEDtvlVTe 306 (323)
T PRK15173 283 SLETPYYGYNLGSIMIEDMILINK 306 (323)
T ss_pred EECCEEEcCCCcEEEEeeEEEEcC
Confidence 99998875443 356789999843
No 48
>PRK14575 putative peptidase; Provisional
Probab=96.71 E-value=0.018 Score=56.96 Aligned_cols=103 Identities=13% Similarity=0.103 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeE
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTI 197 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV 197 (325)
..|++.+++.++.+.+.+.++||++-.||++.+.+.+.+.|.......+.|.......|..+.-.-..-++.+|++|.++
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHGiG~~lg~~e~P~i~~~~~~~Le~GMv~ 365 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGHLGHGNGVFLGLEESPFVSTHATESFTSGMVL 365 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCcccCCCCCccCCCCCCCCCCCcCCCCEE
Confidence 35677888889999999999999999999999999999988643211111111111123322110011245789999999
Q ss_pred EEEEeeeeCc-EEEceeeEEEccC
Q 020521 198 NIDVTVYLNG-YHGDTSATFFCGD 220 (325)
Q Consensus 198 ~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (325)
.++.+.+..| +-.-+..|++|.+
T Consensus 366 tiEpgiy~~g~gGvriEDtvlVT~ 389 (406)
T PRK14575 366 SLETPYYGYNLGSIMIEDMILINK 389 (406)
T ss_pred EECCeeecCCCcEEEEEeEEEEcC
Confidence 9999988655 3356889999953
No 49
>PRK12896 methionine aminopeptidase; Reviewed
Probab=96.70 E-value=0.0079 Score=55.20 Aligned_cols=98 Identities=11% Similarity=0.080 Sum_probs=67.8
Q ss_pred eeeEEEccCCCH--HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCC-cee----eecCCccccCC
Q 020521 212 TSATFFCGDVDD--EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ-FVG----HGIGRVFHADP 284 (325)
Q Consensus 212 ~sRT~~vG~~~~--~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~-~~G----HGIG~~~he~P 284 (325)
-.|++.|-.+.+ ..|++.+.+.++++++++.++||++-.||...+...+.+.|...... ..+ -..|.. .
T Consensus 4 ~~~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n----~ 79 (255)
T PRK12896 4 EGRGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVN----E 79 (255)
T ss_pred cCCceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCC----C
Confidence 357777754443 46788888899999999999999999999999999999988652110 011 111211 1
Q ss_pred ccccccCCCCeeecCCcEEEEcceeeecCc
Q 020521 285 VVLHYRNNDHGRMVLNQTFTIGNIIFSFQV 314 (325)
Q Consensus 285 ~i~~~~~~~~~~L~~GMvftIEP~i~~~g~ 314 (325)
.+.|+.. ++.+|++|+++.++.+....|.
T Consensus 80 ~~~h~~p-~~~~l~~Gd~v~iD~g~~~~gY 108 (255)
T PRK12896 80 EVAHGIP-GPRVIKDGDLVNIDVSAYLDGY 108 (255)
T ss_pred eeEecCC-CCccCCCCCEEEEEEeEEECcE
Confidence 1233322 3478999999999999877554
No 50
>PRK12897 methionine aminopeptidase; Reviewed
Probab=96.68 E-value=0.016 Score=53.31 Aligned_cols=100 Identities=17% Similarity=0.160 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccCC-C-CCCcCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DSRALED 193 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~--~~hg~-p-~~r~l~~ 193 (325)
..|++.+++.++++.+.+.++||++..|++..+.+.+.+.|.... .++.|.. +..+..+. +.+.. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~~GHg--iGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDFTGHG--IGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCeEECc--cCCcccCCCccCCCCCCCCCCCcCC
Confidence 355667888889999999999999999999999999999886432 1222221 22222221 12221 2 3468999
Q ss_pred CCeEEEEEeee-----------------eCc-EEEceeeEEEccC
Q 020521 194 GDTINIDVTVY-----------------LNG-YHGDTSATFFCGD 220 (325)
Q Consensus 194 GDiV~iD~g~~-----------------~~G-Y~~D~sRT~~vG~ 220 (325)
|.++.+.-+.+ .+| +..-+..|++|.+
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt~ 239 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAITK 239 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEeC
Confidence 99999998887 244 5667888888854
No 51
>PRK14576 putative endopeptidase; Provisional
Probab=96.63 E-value=0.024 Score=56.01 Aligned_cols=102 Identities=14% Similarity=0.069 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CCCcCCCCCe
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGDT 196 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p-~~r~l~~GDi 196 (325)
..+++.+++.++.+++.+++|||++-.||+..+.+.+.+.|.......+.|..-....|..+. +...+ ++.+|++|.+
T Consensus 285 ~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~~GHgiG~~l~~~e~-P~i~~~~~~~Le~GMv 363 (405)
T PRK14576 285 LTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGHLGHGDGVFLGLEEV-PFVSTQATETFCPGMV 363 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCCCCCCCCCCCCcCcC-CCcCCCCCCccCCCCE
Confidence 466778888999999999999999999999999999999886332112122211111333332 22122 4678999999
Q ss_pred EEEEEeeeeCc-EEEceeeEEEccC
Q 020521 197 INIDVTVYLNG-YHGDTSATFFCGD 220 (325)
Q Consensus 197 V~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (325)
+.++.+.+..| .-.-+..|++|.+
T Consensus 364 ~~vEp~~y~~g~ggvriEDtvlVTe 388 (405)
T PRK14576 364 LSLETPYYGIGVGSIMLEDMILITD 388 (405)
T ss_pred EEECCceeecCCCEEEEeeEEEECC
Confidence 99998776544 2344788999843
No 52
>PRK12318 methionine aminopeptidase; Provisional
Probab=96.58 E-value=0.026 Score=53.39 Aligned_cols=87 Identities=18% Similarity=0.184 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccCCC-CCCcCCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 194 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~--~~hg~p-~~r~l~~G 194 (325)
.+|++..++.++++.+.+.++||++..||+..+.+.+.+.|.... ..+.|+. +.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~~GHg--IGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQFVGHG--VGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCcccCC--cCccccCCCcccCcCCCCCCEeCCC
Confidence 456788889999999999999999999999999999999886532 1122222 22222221 122112 34679999
Q ss_pred CeEEEEEeeeeCc
Q 020521 195 DTINIDVTVYLNG 207 (325)
Q Consensus 195 DiV~iD~g~~~~G 207 (325)
.++.|+-+.+..+
T Consensus 236 MV~~iEP~i~~~~ 248 (291)
T PRK12318 236 MIFTIEPMINVGK 248 (291)
T ss_pred CEEEECCEEEcCC
Confidence 9999998877653
No 53
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=96.55 E-value=0.036 Score=50.39 Aligned_cols=100 Identities=15% Similarity=0.145 Sum_probs=69.2
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccC----C--CCCCcC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG----I--PDSRAL 191 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg----~--p~~r~l 191 (325)
..|++..++.++++++.+.++||++-.||++.+.+.+.++|....... ++...+....++. +|+ + -++++|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~~--~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRTF--GYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccccc--ccCcccccccccC-CCccccccCCCCCCcc
Confidence 367788899999999999999999999999999999999986432111 1111222222222 111 1 135889
Q ss_pred CCCCeEEEEEeeeeC----cE-EEceeeEEEccC
Q 020521 192 EDGDTINIDVTVYLN----GY-HGDTSATFFCGD 220 (325)
Q Consensus 192 ~~GDiV~iD~g~~~~----GY-~~D~sRT~~vG~ 220 (325)
++|.++.++-+.++. |. ---+..|++|.+
T Consensus 187 e~GMV~~iEP~i~~~~~~~g~gG~ried~v~Vt~ 220 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQPGAGGYREHDILVINE 220 (228)
T ss_pred CCCCEEEECCEEeecccCCCCcEEEeeeEEEECC
Confidence 999999999998863 32 223788888854
No 54
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=96.52 E-value=0.026 Score=55.48 Aligned_cols=99 Identities=16% Similarity=0.247 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC----cccCCC-CCCcCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC----ICHGIP-DSRALE 192 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~----~~hg~p-~~r~l~ 192 (325)
.++++.+++.++.+++.++++||+|-.||++.+.+.+.+.|.... ...|++ +..+.... .+.-.| ++.+|+
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~~--h~~Ghg--iGl~~~~~~~e~~~~l~~~~~~~L~ 346 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHKD--SRTGYP--IGLSYPPDWGERTMSLRPGDNTVLK 346 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccC--CCceee--eccCcCCCCCCccccccCCCCceec
Confidence 466788899999999999999999999999999999999886531 112222 11111100 011112 357899
Q ss_pred CCCeEEEEEeeeeCcEEEceeeEEEccC
Q 020521 193 DGDTINIDVTVYLNGYHGDTSATFFCGD 220 (325)
Q Consensus 193 ~GDiV~iD~g~~~~GY~~D~sRT~~vG~ 220 (325)
+|.++.|+-+.+..|+..-+..|++|.+
T Consensus 347 ~GMv~tvEpgiy~~~~Gvried~v~VT~ 374 (391)
T TIGR02993 347 PGMTFHFMTGLWMEDWGLEITESILITE 374 (391)
T ss_pred CCCEEEEcceeEeCCCCeEEeeEEEECC
Confidence 9999999999998887667888999853
No 55
>PRK09795 aminopeptidase; Provisional
Probab=96.48 E-value=0.043 Score=53.24 Aligned_cols=104 Identities=17% Similarity=0.198 Sum_probs=73.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCC-CCCcC
Q 020521 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRAL 191 (325)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p-~~r~l 191 (325)
+++-+.++++.+++.++.+++.+.++||++-.||++.+++.+.+.|.........|. .+.....+. +.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h~~GH--giGl~~he~-p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGHNTGH--AIGIEVHED-PRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCCCCCc--cCCccccCC-CCcCCCCCCCc
Confidence 455456888999999999999999999999999999999999998864321111111 122222221 11112 46789
Q ss_pred CCCCeEEEEEeeeeCcE-EEceeeEEEcc
Q 020521 192 EDGDTINIDVTVYLNGY-HGDTSATFFCG 219 (325)
Q Consensus 192 ~~GDiV~iD~g~~~~GY-~~D~sRT~~vG 219 (325)
++|.++.|+-+.+..|+ -.-+..|++|.
T Consensus 313 ~~gmv~~iEpgiy~~~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLPGQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeCCCCEEEEeeEEEEC
Confidence 99999999999987664 34567888884
No 56
>PRK08671 methionine aminopeptidase; Provisional
Probab=96.39 E-value=0.062 Score=50.72 Aligned_cols=97 Identities=20% Similarity=0.189 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCC-----CCccc-CCCCCCcC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICH-GIPDSRAL 191 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n-----~~~~h-g~p~~r~l 191 (325)
..+++.+.+.++++.+.+.++||++..||.+.+++.+.+.|..+. .+..|.. .|.+ -.++. ...++.+|
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~GHg----iG~~~~he~p~ip~~~~~~~~~l 176 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTGHG----LERYELHAGPSIPNYDEGGGVKL 176 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcccC----cCCCcccCCCccCccCCCCCcee
Confidence 456788888889999999999999999999999999999998663 2222221 1111 01111 11246789
Q ss_pred CCCCeEEEEEeee-eCcEEEceeeEEEcc
Q 020521 192 EDGDTINIDVTVY-LNGYHGDTSATFFCG 219 (325)
Q Consensus 192 ~~GDiV~iD~g~~-~~GY~~D~sRT~~vG 219 (325)
++|+++.|+..+. -.|+..|..+|-+..
T Consensus 177 e~GmV~aIEp~~t~G~G~v~~~~~~~iy~ 205 (291)
T PRK08671 177 EEGDVYAIEPFATDGEGKVVEGPEVEIYS 205 (291)
T ss_pred CCCCEEEEcceEECCCCeEecCCceEEEe
Confidence 9999999998765 477887877777664
No 57
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=96.38 E-value=0.033 Score=51.19 Aligned_cols=102 Identities=17% Similarity=0.142 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCC--CCCCCCCCCCCceeeecCCCCcccCCC-CCCcCCC
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPSPLGYGGFPKSVCTSVNECICHGIP-DSRALED 193 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~--~ps~l~~~gfp~~v~sg~n~~~~hg~p-~~r~l~~ 193 (325)
+..|++.+++.++.+++.+.++||++-.||...+.+.+.+.+. ........|+ .+....++....-.| ++++|++
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GH--giGle~hE~~~~l~~~~~~~L~~ 196 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGF--GIGLEFRESSLIINAKNDRKLKK 196 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCccc--ccCcccccCccccCCCCCCCcCC
Confidence 3567788899999999999999999999999999999988752 1110001111 122222332111112 4578999
Q ss_pred CCeEEEEEeee-e----------CcEEEceeeEEEccC
Q 020521 194 GDTINIDVTVY-L----------NGYHGDTSATFFCGD 220 (325)
Q Consensus 194 GDiV~iD~g~~-~----------~GY~~D~sRT~~vG~ 220 (325)
|.++.|..|.+ + +.|-.-++.|++|.+
T Consensus 197 GMvf~vepGi~~~~~~~~~~~~~~~~gv~ieDtV~Vt~ 234 (243)
T cd01091 197 GMVFNLSIGFSNLQNPEPKDKESKTYALLLSDTILVTE 234 (243)
T ss_pred CCEEEEeCCcccccCccccCccCCeeEEEEEEEEEEcC
Confidence 99999999987 3 257778899999954
No 58
>PRK07281 methionine aminopeptidase; Reviewed
Probab=96.31 E-value=0.038 Score=52.11 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCC--cccC-CC-CCCcCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~--~~hg-~p-~~r~l~~ 193 (325)
..|++.+++.++++.+++.++||++-.||++.+++.+.++|... ...+.|+. +.....+. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~~GHG--IGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDLVGHG--VGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCeeeee--CCCccCCCCcCCCcccCCCCCEECC
Confidence 36788999999999999999999999999999999998887643 11222221 11112221 1221 12 3567999
Q ss_pred CCeEEEEEeeee
Q 020521 194 GDTINIDVTVYL 205 (325)
Q Consensus 194 GDiV~iD~g~~~ 205 (325)
|.++.|.-+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999998875
No 59
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=96.27 E-value=0.023 Score=53.18 Aligned_cols=91 Identities=12% Similarity=0.207 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCC-CccCCceee--ecCCccccCCccccccCCCCeeecC
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNY-GVVRQFVGH--GIGRVFHADPVVLHYRNNDHGRMVL 299 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~-~~~~~~~GH--GIG~~~he~P~i~~~~~~~~~~L~~ 299 (325)
+.+|++.+.++++++.|-.++|||+|-.||++++++.+-+.|. .---++.|. ++-..+.| .|-|.- .+.+.|+.
T Consensus 123 e~mR~ac~LarevLd~Aa~~v~PgvTTdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNE--viCHGI-PD~RpLed 199 (369)
T KOG2738|consen 123 EGMRKACRLAREVLDYAATLVRPGVTTDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNE--VICHGI-PDSRPLED 199 (369)
T ss_pred HHHHHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhh--eeecCC-CCcCcCCC
Confidence 3467888889999999999999999999999999998877663 211111111 11112212 122221 25679999
Q ss_pred CcEEEEcceeeecCcCc
Q 020521 300 NQTFTIGNIIFSFQVAN 316 (325)
Q Consensus 300 GMvftIEP~i~~~g~gG 316 (325)
|..+.|+..+|..|.-|
T Consensus 200 GDIvNiDVtvY~~GyHG 216 (369)
T KOG2738|consen 200 GDIVNIDVTVYLNGYHG 216 (369)
T ss_pred CCEEeEEEEEEeccccC
Confidence 99999999999877644
No 60
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=96.26 E-value=0.05 Score=49.60 Aligned_cols=102 Identities=16% Similarity=0.135 Sum_probs=67.6
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCC----CCC------------CCCCCCCCCceeeecCCCCc
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG----AYP------------SPLGYGGFPKSVCTSVNECI 181 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G----~~p------------s~l~~~gfp~~v~sg~n~~~ 181 (325)
..++....+.++++.+.+.++||++-.||.+.+.+.+.+++ ..+ ..+..+++...+.....+.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~- 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDV- 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccC-
Confidence 45677788889999999999999999999999988887653 211 0110011111222222221
Q ss_pred ccC--CC-CCCcCCCCCeEEEEEeeeeCc-----------EEEceeeEEEccC
Q 020521 182 CHG--IP-DSRALEDGDTINIDVTVYLNG-----------YHGDTSATFFCGD 220 (325)
Q Consensus 182 ~hg--~p-~~r~l~~GDiV~iD~g~~~~G-----------Y~~D~sRT~~vG~ 220 (325)
++. .+ ++.+|++|..+.|..+.+..+ +-.-+..|++|.+
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~~~~~~~~~~~~~~g~~ied~v~Vt~ 235 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFIPDLLDVPEYFRGGGIRIEDDVLVTE 235 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeCCcccccccccceeEEEeeeEEEEcC
Confidence 111 22 467899999999999998764 5666788898843
No 61
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=96.11 E-value=0.054 Score=47.87 Aligned_cols=87 Identities=16% Similarity=0.073 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH-HHHCCCCccCCceeeecCCccccCCccccccCCCCeeecCCc
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH-ADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 301 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~-~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GM 301 (325)
+..|++.+.+.++++++.+.++||++-.||...+.+. +.+.|.....+..-=+.|... .+.|+.+ ++..|++|+
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~~~~~~~~~~g~~~----~~~~~~~-~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEEPAFPPIVGSGPNT----DLPHYTP-TDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTEESSESEEEECCCC----GETTTBC-CSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCcccCCceEecCCcc----eecceec-cceeeecCC
Confidence 3578899999999999999999999999999999998 677774422111111222221 1233322 467899999
Q ss_pred EEEEcceeeecCc
Q 020521 302 TFTIGNIIFSFQV 314 (325)
Q Consensus 302 vftIEP~i~~~g~ 314 (325)
++.++-+....|.
T Consensus 76 ~v~id~~~~~~gy 88 (207)
T PF00557_consen 76 IVIIDFGPRYDGY 88 (207)
T ss_dssp EEEEEEEEEETTE
T ss_pred cceeeccceeeee
Confidence 9999998877654
No 62
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=96.02 E-value=0.076 Score=48.09 Aligned_cols=99 Identities=18% Similarity=0.159 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCC-CCCCCCCceeeecCCCCcccCCCCCCcCCCCC
Q 020521 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (325)
Q Consensus 117 e~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~-l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GD 195 (325)
...+++.+.+.++++++.+.++||++-.||+..+.+.+.+.|+.+-. +..+++...+.++++... -...|++|.
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~~~~~h~~g~~~~~~~~~~~-----~~~~l~~gm 194 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVEGVLSHQLKRVVSSGEGKAK-----LVECVKHGL 194 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEecCccccCcCceEecCCCCcc-----chhhccCCc
Confidence 45778888899999999999999999999999999999999953211 000111222333322110 146699999
Q ss_pred eEEEEEeeeeCc-EEEceeeEEEccC
Q 020521 196 TINIDVTVYLNG-YHGDTSATFFCGD 220 (325)
Q Consensus 196 iV~iD~g~~~~G-Y~~D~sRT~~vG~ 220 (325)
++.+.......| +..-++.|++|.+
T Consensus 195 vf~~ep~~~~~g~~~~~~~~Tv~vt~ 220 (228)
T cd01089 195 LFPYPVLYEKEGEVVAQFKLTVLLTP 220 (228)
T ss_pred ccccceeEccCCCeEEEEEEEEEEcC
Confidence 999999998766 7889999999953
No 63
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=95.43 E-value=0.13 Score=48.79 Aligned_cols=98 Identities=22% Similarity=0.237 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCce--eeecCCCCcccC-CCCCCcCCCCC
Q 020521 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKS--VCTSVNECICHG-IPDSRALEDGD 195 (325)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~--v~sg~n~~~~hg-~p~~r~l~~GD 195 (325)
.++..+.+.++++++.+.++||++-.||++.+++.+.+.|..|. .++.|..-. ..-+. -.++.. ..++.+|++|+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHgig~~~~h~g-~~ip~i~~~~~~~le~Gm 183 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHSMAPYRLHGG-KSIPNVKERDTTKLEEGD 183 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcceecccccCC-CccCeecCCCCCEeCCCC
Confidence 47788888899999999999999999999999999999998763 233332210 00000 011111 12357899999
Q ss_pred eEEEEEeee-eCcEEEceeeEEEc
Q 020521 196 TINIDVTVY-LNGYHGDTSATFFC 218 (325)
Q Consensus 196 iV~iD~g~~-~~GY~~D~sRT~~v 218 (325)
++.|+.... -.|+..|..+|-+.
T Consensus 184 V~aIEP~~~~G~G~v~~~~~~~iy 207 (295)
T TIGR00501 184 VVAIEPFATDGVGYVTDGGEVSIY 207 (295)
T ss_pred EEEEceeEECCcCeEecCCCeEEE
Confidence 999998654 46788777765544
No 64
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=94.89 E-value=0.28 Score=47.90 Aligned_cols=100 Identities=24% Similarity=0.240 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceee--ecCCCCcccCCC-CCCcCCCCC
Q 020521 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALEDGD 195 (325)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~--sg~n~~~~hg~p-~~r~l~~GD 195 (325)
.|+...+..++.+++.++++||+|-.|+++.+++.+.+.|....... ++...+. ..+.+.-..-.| ++.+|++|-
T Consensus 264 ~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~h--~~GHgvG~~l~vhE~p~~~~~~~~~~L~~GM 341 (384)
T COG0006 264 QREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFLH--GTGHGVGFVLDVHEHPQYLSPGSDTTLEPGM 341 (384)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCcccccC--CccccCCCCcccCcCccccCCCCCccccCCc
Confidence 45778889999999999999999999999999999999764332111 1111112 112111101112 467899999
Q ss_pred eEEEEEeeee-CcEEEceeeEEEccC
Q 020521 196 TINIDVTVYL-NGYHGDTSATFFCGD 220 (325)
Q Consensus 196 iV~iD~g~~~-~GY~~D~sRT~~vG~ 220 (325)
++.++-+.++ ..+-.-+..+++|.+
T Consensus 342 v~t~Epg~y~~g~~GirIEd~vlVte 367 (384)
T COG0006 342 VFSIEPGIYIPGGGGVRIEDTVLVTE 367 (384)
T ss_pred EEEeccccccCCCceEEEEEEEEEcC
Confidence 9999999875 448889999999965
No 65
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=94.78 E-value=0.27 Score=48.49 Aligned_cols=91 Identities=11% Similarity=0.125 Sum_probs=61.4
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCC--ceeeecC----CccccCCccccccC---CCC
Q 020521 224 EARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQ--FVGHGIG----RVFHADPVVLHYRN---NDH 294 (325)
Q Consensus 224 ~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~--~~GHGIG----~~~he~P~i~~~~~---~~~ 294 (325)
..+++-+.+.++++.+++.++||++..||.+.+++.+++.+-..+.. -..+|++ +.. .-.+.|+.. +.+
T Consensus 21 ~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~~~~~~~~~~~g~afpt~vSv--N~~v~H~~P~~~d~~ 98 (389)
T TIGR00495 21 KYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAKIFKKEKEMEKGIAFPTCISV--NNCVGHFSPLKSDQD 98 (389)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhhhhcccccccCCCCCCeEEec--CCeeeCCCCCCCCCC
Confidence 45678888899999999999999999999999988888754211111 0112221 111 112344432 124
Q ss_pred eeecCCcEEEEcceeeecCcCc
Q 020521 295 GRMVLNQTFTIGNIIFSFQVAN 316 (325)
Q Consensus 295 ~~L~~GMvftIEP~i~~~g~gG 316 (325)
.+|++|.++.|+-+....|..+
T Consensus 99 ~~Lk~GDvVkIDlG~~idGY~a 120 (389)
T TIGR00495 99 YILKEGDVVKIDLGCHIDGFIA 120 (389)
T ss_pred cCcCCCCEEEEEEEEEECCEEE
Confidence 7899999999999998877643
No 66
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=94.16 E-value=0.62 Score=46.93 Aligned_cols=85 Identities=16% Similarity=0.176 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHC----CCCccCCceeeecCCccccCCccccccC--CCCeeec
Q 020521 225 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRY----NYGVVRQFVGHGIGRVFHADPVVLHYRN--NDHGRMV 298 (325)
Q Consensus 225 ~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~----G~~~~~~~~GHGIG~~~he~P~i~~~~~--~~~~~L~ 298 (325)
.+++.+.+..+++.+.+.++||++..||...+++.+++. |...-..|. -+++.. -...|+.. +++.+|+
T Consensus 161 ~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g~aFP-t~vS~N----~~aaH~tP~~gd~~vLk 235 (470)
T PTZ00053 161 LRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCGWAFP-TGCSLN----HCAAHYTPNTGDKTVLT 235 (470)
T ss_pred HHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCcccCCCC-ceeecC----ccccCCCCCCCCCcEec
Confidence 567777888889999999999999999999887765543 432111220 123321 11234332 2467999
Q ss_pred CCcEEEEcceeeecCc
Q 020521 299 LNQTFTIGNIIFSFQV 314 (325)
Q Consensus 299 ~GMvftIEP~i~~~g~ 314 (325)
+|.++.|+-+....|.
T Consensus 236 ~GDvVkID~G~~vdGY 251 (470)
T PTZ00053 236 YDDVCKLDFGTHVNGR 251 (470)
T ss_pred CCCeEEEEEeEEECCE
Confidence 9999999999888665
No 67
>PRK10879 proline aminopeptidase P II; Provisional
Probab=93.95 E-value=0.65 Score=46.42 Aligned_cols=101 Identities=18% Similarity=0.208 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHH----HCCCCCCC-------CCCC-CCCcee----eecCCCCcc
Q 020521 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPSP-------LGYG-GFPKSV----CTSVNECIC 182 (325)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~----~~G~~ps~-------l~~~-gfp~~v----~sg~n~~~~ 182 (325)
.|++.+++.++.+++.+.++||++-.||...+.+.+. +.|..+.. -++. .|+..+ ...+++. +
T Consensus 284 q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iGldvHd~-~ 362 (438)
T PRK10879 284 QREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLGLDVHDV-G 362 (438)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccCcCcCcC-C
Confidence 4667778888899999999999999999988876543 33432210 0000 122221 1112221 1
Q ss_pred cCCC-CCCcCCCCCeEEEEEeeeeC----------cEEEceeeEEEccC
Q 020521 183 HGIP-DSRALEDGDTINIDVTVYLN----------GYHGDTSATFFCGD 220 (325)
Q Consensus 183 hg~p-~~r~l~~GDiV~iD~g~~~~----------GY~~D~sRT~~vG~ 220 (325)
+..+ ++++|++|-++.|+-+.+.. |+..-+..|++|.+
T Consensus 363 ~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT~ 411 (438)
T PRK10879 363 VYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVITE 411 (438)
T ss_pred CcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEECC
Confidence 1112 35789999999999999863 45667788999853
No 68
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=91.81 E-value=3.4 Score=37.38 Aligned_cols=97 Identities=15% Similarity=0.081 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHhhhc-CCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCccc--CCCCCCcCCCCCeE
Q 020521 121 VSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH--GIPDSRALEDGDTI 197 (325)
Q Consensus 121 ~A~~ia~~~l~~~~~~i-~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~h--g~p~~r~l~~GDiV 197 (325)
++..++.++...+.+.+ +||++-.+|++.+++.+.+.|.+-. ...|..-.......+.-.. ...++++|++|.++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~~--h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~Gmvf 192 (224)
T cd01085 115 RDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDYG--HGTGHGVGSFLNVHEGPQSISPAPNNVPLKAGMIL 192 (224)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCCC--CCCCCCCCCCCcCCCCCCcCCcCCCCCCcCCCCEE
Confidence 34445555556666665 5999999999999999988885311 0011111100112222111 11245789999999
Q ss_pred EEEEeeeeCc-EEEceeeEEEcc
Q 020521 198 NIDVTVYLNG-YHGDTSATFFCG 219 (325)
Q Consensus 198 ~iD~g~~~~G-Y~~D~sRT~~vG 219 (325)
.|+-+.+..| +..-+..|++|.
T Consensus 193 tiEP~iy~~g~~gvried~v~Vt 215 (224)
T cd01085 193 SNEPGYYKEGKYGIRIENLVLVV 215 (224)
T ss_pred EECCEeEeCCCeEEEeeEEEEEe
Confidence 9999998654 556688889884
No 69
>PRK13607 proline dipeptidase; Provisional
Probab=87.75 E-value=3.7 Score=41.18 Aligned_cols=88 Identities=18% Similarity=0.187 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHH----HHCCCCCC-------CCCC--CCCCce----eeecCCCCcc
Q 020521 120 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGY--GGFPKS----VCTSVNECIC 182 (325)
Q Consensus 120 R~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~----~~~G~~ps-------~l~~--~gfp~~----v~sg~n~~~~ 182 (325)
++...++.++.+++.+.++||++-.||+..+++.+ .+.|.... .-++ ..||.. +...+.++-.
T Consensus 271 ~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~~ 350 (443)
T PRK13607 271 AALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVAG 350 (443)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCCC
Confidence 36788889999999999999999999998887655 44444321 0000 012222 2222222210
Q ss_pred c----------------CCCCCCcCCCCCeEEEEEeeeeCc
Q 020521 183 H----------------GIPDSRALEDGDTINIDVTVYLNG 207 (325)
Q Consensus 183 h----------------g~p~~r~l~~GDiV~iD~g~~~~G 207 (325)
+ ..-++++|++|.++.|+-|+++.+
T Consensus 351 ~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~~ 391 (443)
T PRK13607 351 FMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFID 391 (443)
T ss_pred cccccccccccccccccccccCCcCCCCcEEEECCeeeeCh
Confidence 0 011357899999999999998764
No 70
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=84.39 E-value=5.1 Score=37.97 Aligned_cols=85 Identities=18% Similarity=0.245 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHH----HCCCCccCCceeeecCCcc-ccCCccccccC--CCCe
Q 020521 223 DEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHAD----RYNYGVVRQFVGHGIGRVF-HADPVVLHYRN--NDHG 295 (325)
Q Consensus 223 ~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~----~~G~~~~~~~~GHGIG~~~-he~P~i~~~~~--~~~~ 295 (325)
.+.++..++-+.+...+.+.+|||++.-||.+.++...+ +.|.. .-.|...|... |+. .||.. ++.+
T Consensus 86 ~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~---aGi~FPtG~SlN~cA---AHyTpNaGd~t 159 (397)
T KOG2775|consen 86 QDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLN---AGIGFPTGCSLNHCA---AHYTPNAGDKT 159 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccc---ccccCCCcccccchh---hhcCCCCCCce
Confidence 345677777788888899999999999999888776554 55543 22344444433 222 23321 3668
Q ss_pred eecCCcEEEEcceeeecC
Q 020521 296 RMVLNQTFTIGNIIFSFQ 313 (325)
Q Consensus 296 ~L~~GMvftIEP~i~~~g 313 (325)
+|+...|.-|.-+....|
T Consensus 160 VLqydDV~KiDfGthi~G 177 (397)
T KOG2775|consen 160 VLKYDDVMKIDFGTHIDG 177 (397)
T ss_pred eeeecceEEEeccccccC
Confidence 999999999988777654
No 71
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=71.03 E-value=16 Score=38.85 Aligned_cols=98 Identities=20% Similarity=0.278 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC----CC-CcccCCCCCCcCCC
Q 020521 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV----NE-CICHGIPDSRALED 193 (325)
Q Consensus 119 mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~----n~-~~~hg~p~~r~l~~ 193 (325)
|.+|-..--.+.+++..+++||.+-.+|...+...+.+.+-.-.+ .|.+.+.+|. ++ .+.-..-+++.|+.
T Consensus 259 mq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~~----~~~k~lG~~iGlEFREssl~inaKnd~~lk~ 334 (960)
T KOG1189|consen 259 MQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELVP----NFTKNLGFGIGLEFRESSLVINAKNDRVLKK 334 (960)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchhh----hhhhhcccccceeeecccccccccchhhhcc
Confidence 566777777788888899999999999999999999887632111 1333322221 11 11112235789999
Q ss_pred CCeEEEEEeee-------eCcEEEceeeEEEccC
Q 020521 194 GDTINIDVTVY-------LNGYHGDTSATFFCGD 220 (325)
Q Consensus 194 GDiV~iD~g~~-------~~GY~~D~sRT~~vG~ 220 (325)
|++.+|.+|.. -+-|.--++-|+.||+
T Consensus 335 gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e 368 (960)
T KOG1189|consen 335 GMVFNISLGFSNLTNPESKNSYALLLSDTVLVGE 368 (960)
T ss_pred CcEEEEeeccccccCcccccchhhhccceeeecC
Confidence 99999999873 2347677899999986
No 72
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=63.76 E-value=26 Score=26.14 Aligned_cols=52 Identities=17% Similarity=0.304 Sum_probs=33.1
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC-CcccCCCCCCcCCCCCeEEE
Q 020521 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (325)
Q Consensus 137 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~-~~~hg~p~~r~l~~GDiV~i 199 (325)
++.|-|-.|++..+|..+.++=.+. ...|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f~~A-----------~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQFKYA-----------LVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhCCee-----------EEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4678999999999998876543221 1112111 11223456788999999986
No 73
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=63.16 E-value=13 Score=28.21 Aligned_cols=51 Identities=29% Similarity=0.275 Sum_probs=38.2
Q ss_pred CCcCCCCCeEEEEEeeee-CcEEEcee------eEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCC
Q 020521 188 SRALEDGDTINIDVTVYL-NGYHGDTS------ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM 247 (325)
Q Consensus 188 ~r~l~~GDiV~iD~g~~~-~GY~~D~s------RT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~ 247 (325)
++..++||.|.|++..+. +|-.-|.+ .+|.+|.- ....+++.++..+++|-
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~g~~~~~~~~~~~~~~~~~g~~---------~~i~g~e~al~~m~~Ge 59 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLEDGKVFDSSYQEGEPFEFRLGSG---------QVIPGLEEALIGMKVGE 59 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETTSEEEEETTTTTSEEEEETTSS---------SSSHHHHHHHTTSBTTE
T ss_pred CccCCCCCEEEEEEEEEECCCcEEEEeeecCcceeeeeccC---------ccccchhhhcccccCCC
Confidence 356889999999999987 88777776 67777751 13456777777788874
No 74
>PF07305 DUF1454: Protein of unknown function (DUF1454); InterPro: IPR009918 This family consists of several Enterobacterial sequences of around 200 residues in length, which are often known as YiiQ proteins. The function of this family is unknown.
Probab=62.42 E-value=54 Score=29.02 Aligned_cols=75 Identities=13% Similarity=0.214 Sum_probs=56.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCccCCceeeecCCccccCCccccccCCCCeeecCCc
Q 020521 222 DDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADRYNYGVVRQFVGHGIGRVFHADPVVLHYRNNDHGRMVLNQ 301 (325)
Q Consensus 222 ~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~~G~~~~~~~~GHGIG~~~he~P~i~~~~~~~~~~L~~GM 301 (325)
.++++..-+.+.+=+.+.+...-|..+..+.-+.+++.+.+.+ + .+|.-|-+|-- -+|.. .++ +.|+
T Consensus 114 ~~e~kaar~~a~~YmaAl~r~F~Ptls~eQs~~kl~~lL~~gk-~--~~yy~q~~GAi----RYVva-d~g-----ekgl 180 (200)
T PF07305_consen 114 GPEQKAARALAIEYMAALMRQFEPTLSPEQSQEKLQKLLTKGK-G--SRYYSQTEGAI----RYVVA-DNG-----EKGL 180 (200)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHHHcCC-C--CcceeeccCce----EEEEe-cCC-----Ccee
Confidence 3677777788888888899999999999999999999888743 2 55666777753 23322 122 6799
Q ss_pred EEEEccee
Q 020521 302 TFTIGNII 309 (325)
Q Consensus 302 vftIEP~i 309 (325)
+|+|||+=
T Consensus 181 TFAVEPIK 188 (200)
T PF07305_consen 181 TFAVEPIK 188 (200)
T ss_pred EEEeeeee
Confidence 99999973
No 75
>PRK01490 tig trigger factor; Provisional
Probab=54.86 E-value=41 Score=33.39 Aligned_cols=58 Identities=19% Similarity=0.337 Sum_probs=40.1
Q ss_pred CCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEce----ee
Q 020521 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDT----SA 214 (325)
Q Consensus 139 pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~----sR 214 (325)
.-+|+.+|+..+.+....++-+. +.+++++.||.|.+|+....+|-.-+. ..
T Consensus 130 ~~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~g~~~~~~~~~~~ 185 (435)
T PRK01490 130 VEVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSIDGEEFEGGKAEDF 185 (435)
T ss_pred CCCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEECCEECcCCCCCce
Confidence 34788999988888776655331 223668999999999999888744332 24
Q ss_pred EEEccC
Q 020521 215 TFFCGD 220 (325)
Q Consensus 215 T~~vG~ 220 (325)
+|.+|.
T Consensus 186 ~~~lg~ 191 (435)
T PRK01490 186 SLELGS 191 (435)
T ss_pred EEEEcC
Confidence 566664
No 76
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=52.85 E-value=45 Score=32.78 Aligned_cols=58 Identities=21% Similarity=0.396 Sum_probs=40.7
Q ss_pred CCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEEEEeeeeCcEEEcee----eE
Q 020521 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGYHGDTS----AT 215 (325)
Q Consensus 140 GvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY~~D~s----RT 215 (325)
-+|+.+|+..+.+....++-+.. -++++++.||.|.+|+....+|=.-+.+ .+
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~~-----------------------~~~~~~~~gD~V~v~~~~~~dg~~~~~~~~~~~~ 175 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLVP-----------------------VERRAAEKGDRVTIDFEGFIDGEAFEGGKAENFS 175 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCcccc-----------------------ccccccCCCCEEEEEEEEEECCEECcCCCCCCeE
Confidence 46899999999888877664321 0235789999999999988777554432 35
Q ss_pred EEccC
Q 020521 216 FFCGD 220 (325)
Q Consensus 216 ~~vG~ 220 (325)
|.+|.
T Consensus 176 ~~lg~ 180 (408)
T TIGR00115 176 LELGS 180 (408)
T ss_pred EEECC
Confidence 66664
No 77
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=47.73 E-value=64 Score=33.89 Aligned_cols=83 Identities=20% Similarity=0.254 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecC--C---CCcccCCCC
Q 020521 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N---ECICHGIPD 187 (325)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~--n---~~~~hg~p~ 187 (325)
.+....|.-+.. ..+.....++||.+-.+|...+...+...|-+-.| .|-..+..+. . ...+...-+
T Consensus 298 ~e~~~Ny~fl~~----lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn 369 (1001)
T COG5406 298 SEQQKNYEFLYM----LQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKN 369 (1001)
T ss_pred hHhhhhHHHHHH----HHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccC
Confidence 333444444433 34455668999999999999999999988754221 1322222221 1 112223345
Q ss_pred CCcCCCCCeEEEEEee
Q 020521 188 SRALEDGDTINIDVTV 203 (325)
Q Consensus 188 ~r~l~~GDiV~iD~g~ 203 (325)
+|+||.|++.+|.+|-
T Consensus 370 ~r~lq~g~~fnis~gf 385 (1001)
T COG5406 370 GRVLQAGCIFNISLGF 385 (1001)
T ss_pred CceeccccEEEEeecc
Confidence 7999999999999854
No 78
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=42.65 E-value=51 Score=20.60 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHH
Q 020521 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (325)
Q Consensus 122 A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~ 155 (325)
.|.+...++..+.+.++...|+.+|...+.+.+-
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4678888899999999999999999999988763
No 79
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=41.19 E-value=48 Score=24.73 Aligned_cols=47 Identities=17% Similarity=0.156 Sum_probs=30.7
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEE
Q 020521 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (325)
Q Consensus 137 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~i 199 (325)
++.|.|-.|++..+|..+.+.=.+ ..-.+ ......+..+++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~F~~-----------A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKGFIE-----------AVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhccEE-----------EEEcc-----CEEECCCEEecCCCEEEE
Confidence 466889999999999876643222 11222 122335678999999987
No 80
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=35.07 E-value=1.9e+02 Score=28.32 Aligned_cols=79 Identities=13% Similarity=0.170 Sum_probs=51.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHH--------HHH-C----CCCc-----cCCceeeecCCccccCCcc
Q 020521 225 ARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDH--------ADR-Y----NYGV-----VRQFVGHGIGRVFHADPVV 286 (325)
Q Consensus 225 ~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~--------~~~-~----G~~~-----~~~~~GHGIG~~~he~P~i 286 (325)
.+-+-+.+..++...++.|+||++..||-..-... +++ . |... +.+-.+| -.|..
T Consensus 24 Yk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT~Isvnncv~h-------~sPlk 96 (398)
T KOG2776|consen 24 YKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPTSISVNNCVCH-------FSPLK 96 (398)
T ss_pred hhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccceecccceeec-------cCcCC
Confidence 45556778888889999999999999886554433 333 1 2110 1122222 23433
Q ss_pred ccccCCCCeeecCCcEEEEcceeeecCc
Q 020521 287 LHYRNNDHGRMVLNQTFTIGNIIFSFQV 314 (325)
Q Consensus 287 ~~~~~~~~~~L~~GMvftIEP~i~~~g~ 314 (325)
. +.+..|++|.++-|.-++.++|.
T Consensus 97 s----d~~~~Lk~GDvVKIdLG~HiDGf 120 (398)
T KOG2776|consen 97 S----DADYTLKEGDVVKIDLGVHIDGF 120 (398)
T ss_pred C----CCcccccCCCEEEEEeeeeeccc
Confidence 2 34679999999999999998775
No 81
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=34.10 E-value=30 Score=26.06 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCC
Q 020521 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (325)
Q Consensus 124 ~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~ 159 (325)
.|+.++...+.+.-+.++|+.||...+...+.+.|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344444444444444499999999999999997774
No 82
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=29.99 E-value=1.1e+02 Score=30.75 Aligned_cols=45 Identities=22% Similarity=0.395 Sum_probs=30.9
Q ss_pred CCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEEEEeeeeCcE
Q 020521 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNGY 208 (325)
Q Consensus 140 GvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~iD~g~~~~GY 208 (325)
-+|+.||+..+......+.-+ .|.++.++.||.|.||+.+..+|=
T Consensus 131 ev~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iDg~ 175 (441)
T COG0544 131 EVTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVDGE 175 (441)
T ss_pred ccCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEcCe
Confidence 357788888877666554322 122223899999999999987774
No 83
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=28.99 E-value=2e+02 Score=28.05 Aligned_cols=127 Identities=17% Similarity=0.302 Sum_probs=86.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCC----C----------------
Q 020521 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF----P---------------- 170 (325)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gf----p---------------- 170 (325)
-|+.||+.+-++-..-...++.-...+-|..++.||...++..+.+.-+.|. +|..++ +
T Consensus 97 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT-iNlN~lf~~~~~d~~~~~~LQ~~~~~l 175 (381)
T PF09506_consen 97 VSDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT-INLNSLFDLVPDDVERQQQLQQMMQEL 175 (381)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHhcccHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999999999998887775 222110 0
Q ss_pred ------ceeeec-CCCCcccCCCCC----------CcCCCCCeEEEEEeeee-------------CcEEEceeeEEEcc-
Q 020521 171 ------KSVCTS-VNECICHGIPDS----------RALEDGDTINIDVTVYL-------------NGYHGDTSATFFCG- 219 (325)
Q Consensus 171 ------~~v~sg-~n~~~~hg~p~~----------r~l~~GDiV~iD~g~~~-------------~GY~~D~sRT~~vG- 219 (325)
..-+-| .|+...|..|+- ++-..||+=.-|+-... +-|..+-+-++.+|
T Consensus 176 M~~Ll~~A~~~GL~~SFFlH~aPNLGrd~~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~ 255 (381)
T PF09506_consen 176 MNELLEKAEAQGLENSFFLHYAPNLGRDANGREILKPATAGDVGTTDIQFMLRGAIKEAGLLVLLNRYIAQRTGKAPLGE 255 (381)
T ss_pred HHHHHHHHHhCCcccceEEEeCCCCCCCCCcceeecccccCCCCchhhhhhhhhhhhhcchhHHHHHHHHhhcCCCCccC
Confidence 001223 455667777741 23345777666664332 34555545555555
Q ss_pred -----CCCHHHHHHHHHHHHHHHH
Q 020521 220 -----DVDDEARNLVKVTKDCLHK 238 (325)
Q Consensus 220 -----~~~~~~~~l~~~~~e~~~~ 238 (325)
+.+.....+++.+++....
T Consensus 256 ~FNvR~AP~~h~~Ll~L~~~~i~~ 279 (381)
T PF09506_consen 256 DFNVRQAPKSHQELLDLCKENIPP 279 (381)
T ss_pred ccccccCchhHHHHHHHHHhhCCH
Confidence 3567777787777766544
No 84
>TIGR03516 ppisom_GldI peptidyl-prolyl isomerase, gliding motility-associated. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldI is a FKBP-type peptidyl-prolyl cis-trans isomerase (pfam00254) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockout of this gene abolishes the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. This family is only found in Bacteroidetes containing the suite of genes proposed to confer the gliding motility phenotype.
Probab=27.97 E-value=1.3e+02 Score=26.15 Aligned_cols=54 Identities=15% Similarity=0.178 Sum_probs=37.5
Q ss_pred CCCcCCCCCeEEEEEeee-eCcEEEcee-----eEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCCcH
Q 020521 187 DSRALEDGDTINIDVTVY-LNGYHGDTS-----ATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGMEY 249 (325)
Q Consensus 187 ~~r~l~~GDiV~iD~g~~-~~GY~~D~s-----RT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~~~ 249 (325)
+....++||.|.+++... .+|-.-|-+ .+|.+|. .....++++++..+++|-+.
T Consensus 82 ~g~~p~~gd~V~v~Y~~~~~dG~v~~ss~~~~P~~f~vg~---------~~vi~Gl~e~L~~Mk~Ge~~ 141 (177)
T TIGR03516 82 EGTTPEFGDLVTFEYDIRALDGDVIYSEEELGPQTYKVDQ---------QDLFSGLRDGLKLMKEGETA 141 (177)
T ss_pred CCCcCCCCCEEEEEEEEEeCCCCEEEeCCCCCCEEEEeCC---------cchhHHHHHHHcCCCCCCEE
Confidence 334568999999999876 567555544 3667764 13457778888888888643
No 85
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=27.49 E-value=1.3e+02 Score=21.89 Aligned_cols=42 Identities=12% Similarity=0.323 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHH
Q 020521 221 VDDEARNLVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHADR 262 (325)
Q Consensus 221 ~~~~~~~l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~~~ 262 (325)
.+.+++.+++.+.+.++.+++.++.|.+..=+..-++...+.
T Consensus 10 ~~~Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~ 51 (73)
T PF12631_consen 10 TNARQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALES 51 (73)
T ss_dssp -SHHHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 478999999999999999999999998766555555554444
No 86
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=26.92 E-value=2.2e+02 Score=27.83 Aligned_cols=127 Identities=17% Similarity=0.279 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCC-C-------------------
Q 020521 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGF-P------------------- 170 (325)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gf-p------------------- 170 (325)
-|+.||+.+-++-..-...++.-...+-|..++.||...++..+.+.-+.|. +|..++ .
T Consensus 103 Vs~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~aVldt~~SPT-iNlN~lf~~v~~d~~~~~~LQ~~~~~l 181 (389)
T TIGR02399 103 VSKEEVDFLAAVPDLMRPSLEQIVKKIFPNLVQEEIQTHASKSVLDTRFSPT-INLNSLFDLVKDDSEIRKILQKSFEDL 181 (389)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc-cchHHHHHHccchHHHHHHHHHHHHHH
Confidence 4889999999999999999999999999999999999999999998887775 222110 0
Q ss_pred ------ceeeec-CCCCcccCCCC---------CCcCCCCCeEEEEEeeee-------------CcEEEceeeEEEcc--
Q 020521 171 ------KSVCTS-VNECICHGIPD---------SRALEDGDTINIDVTVYL-------------NGYHGDTSATFFCG-- 219 (325)
Q Consensus 171 ------~~v~sg-~n~~~~hg~p~---------~r~l~~GDiV~iD~g~~~-------------~GY~~D~sRT~~vG-- 219 (325)
..-+-| .|+...|..|+ -++-..||+=.-|+-... +-|..+-+-++.+|
T Consensus 182 M~~Ll~~A~~~GL~~SFFlH~aPNLG~d~G~E~lk~A~~~d~GTTDiQfml~GaiKEaGlL~LlN~~i~~rtG~~PlG~~ 261 (389)
T TIGR02399 182 MNELMYKAKTQGLENSFFLHIAPNLGSDNGNEIIKLASKGDIGTTDIQFMLKGAVKEAGVLFLLNKFIYDSTGIAPLGRN 261 (389)
T ss_pred HHHHHHHHHhCCcccceEEEeCCcCCCccccEeecccCCCCCCchhhHHHhcchhhhhhHHHHHHHHHHhccCCCCCCCC
Confidence 001223 45566777664 123346777777764432 33444444444444
Q ss_pred ----CCCHHHHHHHHHHHHHHHH
Q 020521 220 ----DVDDEARNLVKVTKDCLHK 238 (325)
Q Consensus 220 ----~~~~~~~~l~~~~~e~~~~ 238 (325)
+.+....++++.+++....
T Consensus 262 FNvR~AP~~h~~Ll~L~~~~i~~ 284 (389)
T TIGR02399 262 FNFRDAPKSHQELLNLCKKHIKP 284 (389)
T ss_pred CccccCCccHHHHHHHHHhcCCH
Confidence 3566777777777666544
No 87
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=26.44 E-value=84 Score=21.93 Aligned_cols=35 Identities=17% Similarity=0.360 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHHHHH---hhh-cCCC-CcHHHHHHHHHH
Q 020521 118 CMRVSGRLAAQVLEYA---GTL-VKPG-ITTDEIDKAVHQ 152 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~---~~~-i~pG-vTe~eI~~~~~~ 152 (325)
.+.+|++||.++++.- .+. ++.| +|+.|+++.+.-
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~p 49 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLDP 49 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTSH
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcCH
Confidence 5788999999998653 232 3456 799999988653
No 88
>PRK05728 DNA polymerase III subunit chi; Validated
Probab=24.51 E-value=4.1e+02 Score=22.04 Aligned_cols=101 Identities=10% Similarity=0.016 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCC--CcccCCC-CCCcCCCC
Q 020521 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIP-DSRALEDG 194 (325)
Q Consensus 118 ~mR~A~~ia~~~l~~~~~~i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~--~~~hg~p-~~r~l~~G 194 (325)
..+.+|+++++++..-.+.+--.-++ +....+.+.+...... +|-+....|... ..+-.+. ++..-..+
T Consensus 14 ~~~~~c~L~~ka~~~g~rv~I~~~d~-~~a~~lD~~LW~~~~~-------sFlPH~~~~~~~~~~~PV~l~~~~~~~~~~ 85 (142)
T PRK05728 14 LEALLCELAEKALRAGWRVLVQCEDE-EQAEALDEALWTFRDE-------SFLPHGLAGEGPAAGQPVLLTWPGKRNANH 85 (142)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCH-HHHHHHHHHhcCCCCC-------cCCCCCcCCCCCCCCCCEEEEcCCCCCCCC
Confidence 67889999999988755544433344 5666777777654321 121111111110 0000000 11122345
Q ss_pred CeEEEEEeeeeCcEEEceeeEEEc-cCCCHHHHH
Q 020521 195 DTINIDVTVYLNGYHGDTSATFFC-GDVDDEARN 227 (325)
Q Consensus 195 DiV~iD~g~~~~GY~~D~sRT~~v-G~~~~~~~~ 227 (325)
+-+.|.+....-.+.+...|.+-+ |+ +++.++
T Consensus 86 ~~~LinL~~~~p~~~~~F~Rvieiv~~-d~~~~~ 118 (142)
T PRK05728 86 RDLLINLDGAVPAFAAAFERVVDFVGY-DEAAKQ 118 (142)
T ss_pred CcEEEECCCCCcchhhcccEEEEEeCC-CHHHHH
Confidence 556777777777777788888764 43 554443
No 89
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=22.27 E-value=2.3e+02 Score=21.02 Aligned_cols=48 Identities=21% Similarity=0.209 Sum_probs=30.7
Q ss_pred cCCCCcHHHHHHHHHHHHHHCCCCCCCCCCCCCCceeeecCCCCcccCCCCCCcCCCCCeEEE
Q 020521 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (325)
Q Consensus 137 i~pGvTe~eI~~~~~~~~~~~G~~ps~l~~~gfp~~v~sg~n~~~~hg~p~~r~l~~GDiV~i 199 (325)
++.|.|-.|.+..+|..+.+.=.+ + ..+ .| ..-.+-+..|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~f~~-A---------i~~--k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDGFLH-A---------IDA--RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhccee-e---------EEe--eC---CEEeCCCcEecCCCEEEE
Confidence 466899999999999877643111 0 011 11 223355778999999986
No 90
>PRK05423 hypothetical protein; Provisional
Probab=22.22 E-value=1.2e+02 Score=23.84 Aligned_cols=27 Identities=26% Similarity=0.530 Sum_probs=22.0
Q ss_pred HHHHHhhhcCCCCcHHHHHHHHHHHHH
Q 020521 129 VLEYAGTLVKPGITTDEIDKAVHQMII 155 (325)
Q Consensus 129 ~l~~~~~~i~pGvTe~eI~~~~~~~~~ 155 (325)
.++.+.+-|+||||..||.+++..+--
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~ 70 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKS 70 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHh
Confidence 456677889999999999999877653
No 91
>PF14162 YozD: YozD-like protein
Probab=21.58 E-value=1.2e+02 Score=21.09 Aligned_cols=22 Identities=27% Similarity=0.480 Sum_probs=18.7
Q ss_pred CcHHHHHHHHHHHHHHCCCCCC
Q 020521 141 ITTDEIDKAVHQMIIDNGAYPS 162 (325)
Q Consensus 141 vTe~eI~~~~~~~~~~~G~~ps 162 (325)
+.+.||+..+...+.++|..|+
T Consensus 8 IDTEEIAefFy~eL~kRGyvP~ 29 (57)
T PF14162_consen 8 IDTEEIAEFFYHELVKRGYVPT 29 (57)
T ss_pred ecHHHHHHHHHHHHHHccCCCc
Confidence 5678999999999999998775
No 92
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=20.27 E-value=1.4e+02 Score=23.12 Aligned_cols=25 Identities=20% Similarity=0.480 Sum_probs=21.5
Q ss_pred HHHHhhhcCCCCcHHHHHHHHHHHH
Q 020521 130 LEYAGTLVKPGITTDEIDKAVHQMI 154 (325)
Q Consensus 130 l~~~~~~i~pGvTe~eI~~~~~~~~ 154 (325)
++.+.+-|+|+||..||.+++..+-
T Consensus 38 LdNL~~YI~~~Ms~edi~~II~nMr 62 (95)
T PF04363_consen 38 LDNLSDYIKPDMSIEDIRAIIENMR 62 (95)
T ss_pred HHHHHHHccCCCCHHHHHHHHHHHH
Confidence 6778889999999999999887654
No 93
>KOG2611 consensus Neurochondrin/leucine-rich protein (Neurochondrin) [Function unknown]
Probab=20.24 E-value=44 Score=34.02 Aligned_cols=67 Identities=18% Similarity=0.207 Sum_probs=43.2
Q ss_pred CCeEEEEEeeeeCcEEEceeeEEEccC--------CCHHHHH--HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHH
Q 020521 194 GDTINIDVTVYLNGYHGDTSATFFCGD--------VDDEARN--LVKVTKDCLHKAISVCAPGMEYKKIGKTIQDHA 260 (325)
Q Consensus 194 GDiV~iD~g~~~~GY~~D~sRT~~vG~--------~~~~~~~--l~~~~~e~~~~~i~~~kPG~~~~dI~~~i~~~~ 260 (325)
+|.-.+-++..|.|||+|++.-|+.|- .-++..+ +-..--+..-..++.++||.--.++-.+.+++.
T Consensus 584 nD~taLvvS~aYkG~WsDLsELWFLGMQt~~G~lPLvPWLs~~AL~S~W~e~ivk~L~kVk~~tl~~nv~sAYe~~L 660 (698)
T KOG2611|consen 584 NDPTALVVSIAYKGYWSDLSELWFLGMQTMCGVLPLVPWLSEFALESGWAEGIVKTLKKVKIGTLPANVKSAYEDFL 660 (698)
T ss_pred CCCceEEeehhhhhhhhhHHHHHHHhHHHHcCcccchhhhcHHHHhcccHHHHHHHHhcCCCCCcCHHHHHHHHHHH
Confidence 677777889999999999999999872 1122211 111222344455677888887666666655544
No 94
>PF02829 3H: 3H domain; InterPro: IPR004173 The 3H domain is named after its three highly conserved histidine residues. The 3H domain appears to be a small molecule-binding domain, based on its occurrence with other domains []. Several proteins carrying this domain are transcriptional regulators from the biotin repressor family. The transcription regulator TM1602 from Thermotoga maritima is a DNA-binding protein thought to belong to a family of de novo NAD synthesis pathway regulators. TM1602 has an N-terminal DNA-binding domain and a C-terminal 3H regulatory domain. The N-terminal domain appears to bind to the NAD promoter region and repress the de novo NAD biosynthesis operon, while the C-terminal 3H domain may bind to nicotinamide, nicotinic acid, or other substrate/products []. The 3H domain has a 2-layer alpha/beta sandwich fold.; GO: 0005488 binding; PDB: 1J5Y_A.
Probab=20.11 E-value=2.3e+02 Score=22.25 Aligned_cols=67 Identities=12% Similarity=0.164 Sum_probs=48.5
Q ss_pred EEEEEeeeeCcEEEceeeEEEccCCCHHHHHHHHHHHHHHHHHHHhcCCCC-------cHHHHHHHHHHHHHHCCC
Q 020521 197 INIDVTVYLNGYHGDTSATFFCGDVDDEARNLVKVTKDCLHKAISVCAPGM-------EYKKIGKTIQDHADRYNY 265 (325)
Q Consensus 197 V~iD~g~~~~GY~~D~sRT~~vG~~~~~~~~l~~~~~e~~~~~i~~~kPG~-------~~~dI~~~i~~~~~~~G~ 265 (325)
..+|+.+...+|- .+++.+.+-. ..+.++.++...+.....+..+.-|+ +-.+..+.|.+.+++.||
T Consensus 23 ~V~DV~veHp~YG-~i~~~L~i~s-r~Dv~~Fi~~l~~~~~~~Ls~LT~GvH~HtI~a~~~e~l~~I~~~L~~~G~ 96 (98)
T PF02829_consen 23 RVLDVIVEHPVYG-EITGNLNISS-RRDVDKFIEKLEKSKAKPLSSLTGGVHYHTIEAPDEEDLDKIEEALKKKGF 96 (98)
T ss_dssp EEEEEEEEETTTE-EEEEEEEE-S-HHHHHHHHHHHHH--S--STTGGGGEEEEEEEESSHHHHHHHHHHHHHTT-
T ss_pred EEEEEEEeCCCCc-EEEEEEecCC-HHHHHHHHHHHhccCCcchHHhcCCEeeEEEEECCHHHHHHHHHHHHHCCC
Confidence 4469999999998 9999999943 56667777777777667777776663 567788999999999987
Done!