BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020525
(325 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 167 bits (423), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 90/215 (41%), Positives = 127/215 (59%), Gaps = 4/215 (1%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G+C +RLLVY +M GS+ L + P + LDW R +IA G+A+GL YLHD +P
Sbjct: 102 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+I+RD K++NILL+E F + DFGLAKL D HV V GT G+ APEY TG+
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGTIGHIAPEYLSTGKS 220
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN--LVTWARPLFNDRRKFSKLADPRLEG 192
+ K+DV+ +GV+ LELITG++A D R + + L+ W + L + +K L D L+G
Sbjct: 221 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQG 279
Query: 193 RYPIRGLYQALAVASMCIQEQAATRPLIGDVVTAL 227
Y + Q + VA +C Q RP + +VV L
Sbjct: 280 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 314
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 165 bits (418), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/215 (41%), Positives = 126/215 (58%), Gaps = 4/215 (1%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G+C +RLLVY +M GS+ L + P + LDW R +IA G+A+GL YLHD +P
Sbjct: 94 GFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+I+RD K++NILL+E F + DFGLAKL D HV V G G+ APEY TG+
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD-XHVXXAVRGXIGHIAPEYLSTGKS 212
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN--LVTWARPLFNDRRKFSKLADPRLEG 192
+ K+DV+ +GV+ LELITG++A D R + + L+ W + L + +K L D L+G
Sbjct: 213 SEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKE-KKLEALVDVDLQG 271
Query: 193 RYPIRGLYQALAVASMCIQEQAATRPLIGDVVTAL 227
Y + Q + VA +C Q RP + +VV L
Sbjct: 272 NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRML 306
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 164 bits (414), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/218 (40%), Positives = 131/218 (60%), Gaps = 8/218 (3%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH--DLPPDKEALDWNTRMKIAAGAAKGLEYLHDK 71
IG+C + ++ +L+Y++M G+L+ HL+ DLP ++ W R++I GAA+GL YLH +
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR 158
Query: 72 ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
A +I+RD KS NILL+E F PK++DFG++K G D++H+ V GT GY PEY +
Sbjct: 159 A---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIK 215
Query: 132 GQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLE 191
G+LT KSDVYSFGVV E++ R AI + P NL WA N+ + ++ DP L
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQLEQIVDPNLA 274
Query: 192 GRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSY 229
+ L + A C+ + RP +GDV+ L Y
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 160 bits (406), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 130/218 (59%), Gaps = 8/218 (3%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH--DLPPDKEALDWNTRMKIAAGAAKGLEYLHDK 71
IG+C + ++ +L+Y++M G+L+ HL+ DLP ++ W R++I GAA+GL YLH +
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLP--TMSMSWEQRLEICIGAARGLHYLHTR 158
Query: 72 ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
A +I+RD KS NILL+E F PK++DFG++K G ++H+ V GT GY PEY +
Sbjct: 159 A---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIK 215
Query: 132 GQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLE 191
G+LT KSDVYSFGVV E++ R AI + P NL WA N+ + ++ DP L
Sbjct: 216 GRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNN-GQLEQIVDPNLA 274
Query: 192 GRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSY 229
+ L + A C+ + RP +GDV+ L Y
Sbjct: 275 DKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEY 312
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (351), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 125/215 (58%), Gaps = 18/215 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
+G+ +DGD LVY +MP GSL D L L PP L W+ R KIA GAA G+ +LH+
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHE 151
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ I+RD KS+NILL+E F K+SDFGLA+ ++ + +R++GT Y APE A+
Sbjct: 152 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPE-AL 207
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
G++T KSD+YSFGVV LE+ITG A+D R Q L+ + ++ + D ++
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 191 E--GRYPIRGLYQALAVASMCIQEQAATRPLIGDV 223
+ +Y +VAS C+ E+ RP I V
Sbjct: 266 NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 297
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 139 bits (349), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 124/215 (57%), Gaps = 18/215 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
+G+ +DGD LVY +MP GSL D L L PP L W+ R KIA GAA G+ +LH+
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHE 151
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ I+RD KS+NILL+E F K+SDFGLA+ ++ + R++GT Y APE A+
Sbjct: 152 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPE-AL 207
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
G++T KSD+YSFGVV LE+ITG A+D R Q L+ + ++ + D ++
Sbjct: 208 RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKM 265
Query: 191 E--GRYPIRGLYQALAVASMCIQEQAATRPLIGDV 223
+ +Y +VAS C+ E+ RP I V
Sbjct: 266 NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 297
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 87/215 (40%), Positives = 123/215 (57%), Gaps = 18/215 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
+G+ +DGD LVY +MP GSL D L L PP L W+ R KIA GAA G+ +LH+
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPP----LSWHMRCKIAQGAANGINFLHE 145
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ I+RD KS+NILL+E F K+SDFGLA+ + + R++GT Y APE A+
Sbjct: 146 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPE-AL 201
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
G++T KSD+YSFGVV LE+ITG A+D R Q L+ + ++ + D ++
Sbjct: 202 RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKM 259
Query: 191 E--GRYPIRGLYQALAVASMCIQEQAATRPLIGDV 223
+ +Y +VAS C+ E+ RP I V
Sbjct: 260 NDADSTSVEAMY---SVASQCLHEKKNKRPDIKKV 291
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 132 bits (331), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 120/215 (55%), Gaps = 18/215 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
+G+ +DGD LVY + P GSL D L L PP L W+ R KIA GAA G+ +LH+
Sbjct: 87 LGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPP----LSWHXRCKIAQGAANGINFLHE 142
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ I+RD KS+NILL+E F K+SDFGLA+ + +R++GT Y APE A+
Sbjct: 143 NHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPE-AL 198
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
G++T KSD+YSFGVV LE+ITG A+D R Q L+ + ++ + D +
Sbjct: 199 RGEITPKSDIYSFGVVLLEIITGLPAVDEHRE--PQLLLDIKEEIEDEEKTIEDYIDKKX 256
Query: 191 E--GRYPIRGLYQALAVASMCIQEQAATRPLIGDV 223
+ Y +VAS C+ E+ RP I V
Sbjct: 257 NDADSTSVEAXY---SVASQCLHEKKNKRPDIKKV 288
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ GSL LH +E LD R+ +A AKG+ YLH++ NPP+++RD KS
Sbjct: 111 IVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRDLKSP 168
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+L+++ + K+ DFGL++L S GT + APE KSDVYSFG
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLK--ASXFLXSKXAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 145 VVFLELITGRKAIDSTRP 162
V+ EL T ++ + P
Sbjct: 227 VILWELATLQQPWGNLNP 244
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ GSL LH +E LD R+ +A AKG+ YLH++ NPP+++R+ KS
Sbjct: 111 IVTEYLSRGSLYRLLHK-SGAREQLDERRRLSMAYDVAKGMNYLHNR-NPPIVHRNLKSP 168
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+L+++ + K+ DFGL++L S S GT + APE KSDVYSFG
Sbjct: 169 NLLVDKKYTVKVCDFGLSRLKASTFLS--SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG 226
Query: 145 VVFLELITGRKAIDSTRP 162
V+ EL T ++ + P
Sbjct: 227 VILWELATLQQPWGNLNP 244
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 78/151 (51%), Gaps = 25/151 (16%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHD--LPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C LV EF G L L +PPD ++W ++ A+G+ YLHD+A
Sbjct: 73 GVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDI-LVNWAVQI------ARGMNYLHDEA 125
Query: 73 NPPVIYRDFKSSNILLEEGFHP--------KLSDFGLAKLGPVGDKSHVSTRV--MGTYG 122
P+I+RD KSSNIL+ + K++DFGLA+ + H +T++ G Y
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR------EWHRTTKMSAAGAYA 179
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ APE + SDV+S+GV+ EL+TG
Sbjct: 180 WMAPEVIRASMFSKGSDVWSYGVLLWELLTG 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDL 158
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 139 DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRG 198
DVY+FG+V EL+TG+ P+ N+ + +F R + ++ P +
Sbjct: 219 DVYAFGIVLYELMTGQ------LPYS--NINNRDQIIFMVGRGYLSPDLSKVRSNCP-KA 269
Query: 199 LYQALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHR 241
+ + +A C++++ RPL ++ ++ LA P HR
Sbjct: 270 MKRLMA---ECLKKKRDERPLFPQILASIELLARSL--PKIHR 307
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 104 QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDL 157
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 217
Query: 139 DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRG 198
DVY+FG+V EL+TG+ P+ N+ + +F R + ++ P +
Sbjct: 218 DVYAFGIVLYELMTGQ------LPYS--NINNRDQIIFMVGRGYLSPDLSKVRSNCP-KA 268
Query: 199 LYQALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHR 241
+ + +A C++++ RPL ++ ++ LA P HR
Sbjct: 269 MKRLMA---ECLKKKRDERPLFPQILASIELLARSL--PKIHR 306
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 77/144 (53%), Gaps = 10/144 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+GY + Q +V ++ SL HLH + E + + IA A+G++YLH K+
Sbjct: 70 MGY-STAPQLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS- 124
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT-- 131
+I+RD KS+NI L E K+ DFGLA + SH ++ G+ + APE
Sbjct: 125 --IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQD 182
Query: 132 -GQLTVKSDVYSFGVVFLELITGR 154
+ +SDVY+FG+V EL+TG+
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQ 206
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 139 DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRG 198
DVY+FG+V EL+TG+ P+ N+ + +F R + ++ P +
Sbjct: 196 DVYAFGIVLYELMTGQ------LPYS--NINNRDQIIFMVGRGYLSPDLSKVRSNCP-KA 246
Query: 199 LYQALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHR 241
+ + +A C++++ RPL ++ ++ LA P HR
Sbjct: 247 MKRLMA---ECLKKKRDERPLFPQILASIELLARSL--PKIHR 284
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 79 QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHRDL 132
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 192
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 193 DVYAFGIVLYELMTGQ 208
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 82 QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHRDL 135
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 195
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 196 DVYAFGIVLYELMTGQ 211
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 191 DVYAFGIVLYELMTGQ 206
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + + + IA A+G++YLH K+ +I+RD
Sbjct: 81 QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 134
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM---TGQLTVKS 138
KS+NI L E K+ DFGLA + SH ++ G+ + APE + + +S
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 194
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 195 DVYAFGIVLYELMTGQ 210
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 105 QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDL 158
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA SH ++ G+ + APE + +S
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 218
Query: 139 DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRG 198
DVY+FG+V EL+TG+ P+ N+ + +F R + ++ P +
Sbjct: 219 DVYAFGIVLYELMTGQ------LPYS--NINNRDQIIFMVGRGYLSPDLSKVRSNCP-KA 269
Query: 199 LYQALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHR 241
+ + +A C++++ RPL ++ ++ LA P HR
Sbjct: 270 MKRLMA---ECLKKKRDERPLFPQILASIELLARSL--PKIHR 307
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 106/224 (47%), Gaps = 23/224 (10%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 97 QLAIVTQWCEGSSLYHHLHIIETKFEMIKL---IDIARQTAQGMDYLHAKS---IIHRDL 150
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA SH ++ G+ + APE + +S
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 210
Query: 139 DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRG 198
DVY+FG+V EL+TG+ P+ N+ + +F R + ++ P +
Sbjct: 211 DVYAFGIVLYELMTGQ------LPYS--NINNRDQIIFMVGRGYLSPDLSKVRSNCP-KA 261
Query: 199 LYQALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHRG 242
+ + +A C++++ RPL ++ ++ LA P HR
Sbjct: 262 MKRLMA---ECLKKKRDERPLFPQILASIELLARSL--PKIHRS 300
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEFFKVKEPGESPIFWYAPESLT 190
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L D + AL + +AA A G+ Y+ ++ N I+RD +S+
Sbjct: 80 IVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYI-ERMN--YIHRDLRSA 134
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ G K++DFGLA+L + D + + + APE A+ G+ T+KSDV+SF
Sbjct: 135 NILVGNGLICKIADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 144 GVVFLELIT 152
G++ EL+T
Sbjct: 193 GILLTELVT 201
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 133
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 134 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 189
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 190 ESKFSVASDVWSFGVVLYELFT 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 138
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 139 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 194
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 195 ESKFSVASDVWSFGVVLYELFT 216
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 139
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 140 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 195
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 196 ESKFSVASDVWSFGVVLYELFT 217
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ EF+P GSL ++L KE +D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 134
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 135 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 190
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 191 ESKFSVASDVWSFGVVLYELFT 212
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 140
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 141 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 196
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 197 ESKFSVASDVWSFGVVLYELFT 218
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 132
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 133 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 188
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 189 ESKFSVASDVWSFGVVLYELFT 210
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 141
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 142 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 197
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 198 ESKFSVASDVWSFGVVLYELFT 219
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + E + + IA A+G++YLH K+ +I+RD
Sbjct: 77 QLAIVTQWCEGSSLYHHLHIIETKFEMIK---LIDIARQTAQGMDYLHAKS---IIHRDL 130
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKS 138
KS+NI L E K+ DFGLA SH ++ G+ + APE + +S
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 191 DVYAFGIVLYELMTGQ 206
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+GY + Q +V ++ SL HLH + + + IA A+G++YLH K+
Sbjct: 86 MGY-STAPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS- 140
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
+I+RD KS+NI L E K+ DFGLA SH ++ G+ + APE
Sbjct: 141 --IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQD 198
Query: 131 TGQLTVKSDVYSFGVVFLELITGR 154
+ + +SDVY+FG+V EL+TG+
Sbjct: 199 SNPYSFQSDVYAFGIVLYELMTGQ 222
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 152
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 153 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 208
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 209 ESKFSVASDVWSFGVVLYELFT 230
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 165
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 166 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 221
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 222 ESKFSVASDVWSFGVVLYELFT 243
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 73/142 (51%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L KE +D ++ + KG+EYL K
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQK---HKERIDHIKLLQYTSQICKGMEYLGTKR 135
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+R+ + NIL+E K+ DFGL K+ P DK + + G + APE
Sbjct: 136 ---YIHRNLATRNILVENENRVKIGDFGLTKVLP-QDKEYYKVKEPGESPIFWYAPESLT 191
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 192 ESKFSVASDVWSFGVVLYELFT 213
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
Q +V ++ SL HLH + + + IA A+G++YLH K+ +I+RD
Sbjct: 93 QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLHAKS---IIHRDL 146
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM---TGQLTVKS 138
KS+NI L E K+ DFGLA SH ++ G+ + APE + + +S
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQS 206
Query: 139 DVYSFGVVFLELITGR 154
DVY+FG+V EL+TG+
Sbjct: 207 DVYAFGIVLYELMTGQ 222
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 20 GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
G Q L LV E++P G L D L + LD + + ++ KG+EYL + ++
Sbjct: 84 GRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVH 137
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLT 135
RD + NIL+E H K++DFGLAKL P+ DK + R G + Y APE +
Sbjct: 138 RDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWY-APESLSDNIFS 195
Query: 136 VKSDVYSFGVVFLELIT 152
+SDV+SFGVV EL T
Sbjct: 196 RQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 20 GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
G Q L LV E++P G L D L + LD + + ++ KG+EYL + ++
Sbjct: 85 GRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVH 138
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLT 135
RD + NIL+E H K++DFGLAKL P+ DK + R G + Y APE +
Sbjct: 139 RDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWY-APESLSDNIFS 196
Query: 136 VKSDVYSFGVVFLELIT 152
+SDV+SFGVV EL T
Sbjct: 197 RQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 20 GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
G Q L LV E++P G L D L + LD + + ++ KG+EYL + ++
Sbjct: 97 GRQSLRLVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVH 150
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLT 135
RD + NIL+E H K++DFGLAKL P+ DK + R G + Y APE +
Sbjct: 151 RDLAARNILVESEAHVKIADFGLAKLLPL-DKDYYVVREPGQSPIFWY-APESLSDNIFS 208
Query: 136 VKSDVYSFGVVFLELIT 152
+SDV+SFGVV EL T
Sbjct: 209 RQSDVWSFGVVLYELFT 225
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 10/143 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+GY D +V ++ SL HLH + + IA A+G++YLH K
Sbjct: 98 MGYMTK-DNLAIVTQWCEGSSLYKHLH---VQETKFQMFQLIDIARQTAQGMDYLHAKN- 152
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
+I+RD KS+NI L EG K+ DFGLA + S + G+ + APE
Sbjct: 153 --IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQD 210
Query: 131 TGQLTVKSDVYSFGVVFLELITG 153
+ +SDVYS+G+V EL+TG
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTG 233
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV E++P G L D L + LD + + ++ KG+EYL + ++RD +
Sbjct: 87 LVMEYLPSGCLRDFLQR---HRARLDASRLLLYSSQICKGMEYLGSRR---CVHRDLAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLTVKSDVY 141
NIL+E H K++DFGLAKL P+ DK R G + Y APE + +SDV+
Sbjct: 141 NILVESEAHVKIADFGLAKLLPL-DKDXXVVREPGQSPIFWY-APESLSDNIFSRQSDVW 198
Query: 142 SFGVVFLELIT 152
SFGVV EL T
Sbjct: 199 SFGVVLYELFT 209
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 16/141 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V EF+P G L L D + W+ ++++ A G+EY+ ++ NPP+++RD +S
Sbjct: 98 MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSP 153
Query: 85 NILLEE-----GFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEY--AMTGQLTVK 137
NI L+ K++DFGL++ H + ++G + + APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFGLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 138 SDVYSFGVVFLELITGRKAID 158
+D YSF ++ ++TG D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 71/142 (50%), Gaps = 11/142 (7%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C +R L+ E++P GSL D+L E +D ++ + KG+EYL K
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTKR 137
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAM 130
I+RD + NIL+E K+ DFGL K+ P DK + G + APE
Sbjct: 138 ---YIHRDLATRNILVENENRVKIGDFGLTKVLP-QDKEXXKVKEPGESPIFWYAPESLT 193
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ +V SDV+SFGVV EL T
Sbjct: 194 ESKFSVASDVWSFGVVLYELFT 215
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 15 GYCAD--GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C + G+ L+ EF+P GSL+++L P +K ++ ++K A KG++YL +
Sbjct: 90 GICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 146
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST---RVMGTYGYCAPEYA 129
++RD + N+L+E K+ DFGL K DK + R + Y APE
Sbjct: 147 ---YVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECL 201
Query: 130 MTGQLTVKSDVYSFGVVFLELIT 152
M + + SDV+SFGV EL+T
Sbjct: 202 MQSKFYIASDVWSFGVTLHELLT 224
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 13/143 (9%)
Query: 15 GYCAD--GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C + G+ L+ EF+P GSL+++L P +K ++ ++K A KG++YL +
Sbjct: 78 GICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYAVQICKGMDYLGSRQ 134
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST---RVMGTYGYCAPEYA 129
++RD + N+L+E K+ DFGL K DK + R + Y APE
Sbjct: 135 ---YVHRDLAARNVLVESEHQVKIGDFGLTK-AIETDKEXXTVKDDRDSPVFWY-APECL 189
Query: 130 MTGQLTVKSDVYSFGVVFLELIT 152
M + + SDV+SFGV EL+T
Sbjct: 190 MQSKFYIASDVWSFGVTLHELLT 212
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 90 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 145 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 89 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 144 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 201
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 202 GILLTEIVTHGRIPYPGMTNPEVIQNL 228
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 94 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 148
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 149 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 206
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 207 GILLTEIVTHGRIPYPGMTNPEVIQNL 233
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 84 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 139 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 196
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 197 GILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 79 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 133
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 134 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 191
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 192 GILLTEIVTHGRIPYPGMTNPEVIQNL 218
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 92 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 146
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 147 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 203
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 204 FGILLTEIVTHGRIPYPGMTNPEVIQNL 231
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 84 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDAEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 90 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 144
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + APE G T+KSDV+SF
Sbjct: 145 NILVSDTLSCKIADFGLARL--IEDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 202
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 203 GILLTEIVTHGRIPYPGMTNPEVIQNL 229
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 93 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 147
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 148 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 204
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 205 FGILLTEIVTHGRIPYPGMTNPEVIQNL 232
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 84 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 86 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 141 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 197
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 198 FGILLTEIVTHGRIPYPGMTNPEVIQNL 225
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 84 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 139 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 195
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 196 FGILLTEIVTHGRIPYPGMTNPEVIQNL 223
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 80/148 (54%), Gaps = 12/148 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+RD +++
Sbjct: 85 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRDLRAA 139
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ + K++DFGLA+L + + + R + + APE G T+KSDV+S
Sbjct: 140 NILVSDTLSCKIADFGLARLI---EDNEXTAREGAKFPIKWTAPEAINYGTFTIKSDVWS 196
Query: 143 FGVVFLELIT-GRKAIDS-TRPHGEQNL 168
FG++ E++T GR T P QNL
Sbjct: 197 FGILLTEIVTHGRIPYPGMTNPEVIQNL 224
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V EF+P G L L D + W+ ++++ A G+EY+ ++ NPP+++RD +S
Sbjct: 98 MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSP 153
Query: 85 NILLEE-----GFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEY--AMTGQLTVK 137
NI L+ K++DFG ++ H + ++G + + APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFGTSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 138 SDVYSFGVVFLELITGRKAID 158
+D YSF ++ ++TG D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 80/193 (41%), Gaps = 20/193 (10%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA LEYLH K +IYRD K NILL++ H K++DFG AK P V+ +
Sbjct: 112 AAEVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP-----DVTYXL 163
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFN 177
GT Y APE T D +SFG++ E++ G P + N + + N
Sbjct: 164 CGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT------PFYDSNTMKTYEKILN 217
Query: 178 DRRKFSKLAD---PRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVV--TALSYLAN 232
+F + L R R L Q L E P +VV LS
Sbjct: 218 AELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNG-TEDVKNHPWFKEVVWEKLLSRNIE 276
Query: 233 QTYDPNSHRGAGD 245
Y+P +G GD
Sbjct: 277 TPYEPPIQQGQGD 289
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 16/141 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V EF+P G L L D + W+ ++++ A G+EY+ ++ NPP+++RD +S
Sbjct: 98 MVMEFVPCGDLYHRLLD---KAHPIKWSVKLRLMLDIALGIEYMQNQ-NPPIVHRDLRSP 153
Query: 85 NILLEE-----GFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEY--AMTGQLTVK 137
NI L+ K++DF L++ H + ++G + + APE A T K
Sbjct: 154 NIFLQSLDENAPVCAKVADFSLSQ-----QSVHSVSGLLGNFQWMAPETIGAEEESYTEK 208
Query: 138 SDVYSFGVVFLELITGRKAID 158
+D YSF ++ ++TG D
Sbjct: 209 ADTYSFAMILYTILTGEGPFD 229
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 10/147 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L P L N + +AA A+G+ ++ ++ I+R+ +++
Sbjct: 80 IITEYMENGSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERN---YIHRNLRAA 134
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ + K++DFGLA+L + D + + + APE G T+KSDV+SF
Sbjct: 135 NILVSDTLSCKIADFGLARL--IEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSF 192
Query: 144 GVVFLELIT-GRKAIDS-TRPHGEQNL 168
G++ E++T GR T P QNL
Sbjct: 193 GILLTEIVTHGRIPYPGMTNPEVIQNL 219
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 15/150 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGAA 62
G C DGD ++V+E+M G L L PD K L + + IA+ A
Sbjct: 84 GVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIA 143
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
G+ YL A+ ++RD + N L+ K+ DFG+++ D V M
Sbjct: 144 SGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIR 200
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ PE M + T +SDV+SFGV+ E+ T
Sbjct: 201 WMPPESIMYRKFTTESDVWSFGVILWEIFT 230
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C G LV +++PLGSL DH+ + AL + AKG+ YL +
Sbjct: 99 LGLCP-GSSLQLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEHG- 153
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++R+ + N+LL+ +++DFG+A L P DK + + + A E G+
Sbjct: 154 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 211
Query: 134 LTVKSDVYSFGVVFLELIT 152
T +SDV+S+GV EL+T
Sbjct: 212 YTHQSDVWSYGVTVWELMT 230
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEAL-----------DWNTRMKIAAGAA 62
G C +G L+V+E+M G L L PD + L + +A+ A
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
G+ YL A ++RD + N L+ +G K+ DFG+++ D V R M
Sbjct: 140 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ PE + + T +SDV+SFGVV E+ T
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFT 226
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE-----------ALDWNTRMKIAAGAA 62
G C +G L+V+E+M G L L PD + L + +A+ A
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
G+ YL A ++RD + N L+ +G K+ DFG+++ D V R M
Sbjct: 169 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ PE + + T +SDV+SFGVV E+ T
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFT 255
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 14/150 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEAL-----------DWNTRMKIAAGAA 62
G C +G L+V+E+M G L L PD + L + +A+ A
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
G+ YL A ++RD + N L+ +G K+ DFG+++ D V R M
Sbjct: 146 AGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ PE + + T +SDV+SFGVV E+ T
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFT 232
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 338 IVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 392
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 393 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 450
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 451 GILLTELTT 459
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C G LV +++PLGSL DH+ + AL + AKG+ YL +
Sbjct: 81 LGLCP-GSSLQLVTQYLPLGSLLDHVRQ---HRGALGPQLLLNWGVQIAKGMYYLEEHG- 135
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++R+ + N+LL+ +++DFG+A L P DK + + + A E G+
Sbjct: 136 --MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIHFGK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
T +SDV+S+GV EL+T
Sbjct: 194 YTHQSDVWSYGVTVWELMT 212
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 67/147 (45%), Gaps = 12/147 (8%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDK---------EALDWNTRMKIAAGAAKGL 65
G C +GD ++V+E+M G L L PD L + + IA A G+
Sbjct: 82 GVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGM 141
Query: 66 EYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCA 125
YL A+ ++RD + N L+ E K+ DFG+++ D V M +
Sbjct: 142 VYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMP 198
Query: 126 PEYAMTGQLTVKSDVYSFGVVFLELIT 152
PE M + T +SDV+S GVV E+ T
Sbjct: 199 PESIMYRKFTTESDVWSLGVVLWEIFT 225
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 255 IVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 309
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 310 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 368 GILLTELTT 376
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 255 IVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 309
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 310 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 368 GILLTELTT 376
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 82 IVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 136
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 137 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 194
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 195 GILLTELTT 203
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ EFM GSL D L K+ L + +A A+G+ ++ + I+RD +++
Sbjct: 253 IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAA 307
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
NIL+ K++DFGLA+ VG K + + APE G T+KSDV+SFG
Sbjct: 308 NILVSASLVCKIADFGLAR---VGAKFPIK--------WTAPEAINFGSFTIKSDVWSFG 356
Query: 145 VVFLELIT 152
++ +E++T
Sbjct: 357 ILLMEIVT 364
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
V E++ G L H+ D + AA GL++LH K ++YRD K
Sbjct: 95 FFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKL 147
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NILL++ H K++DFG+ K +GD + GT Y APE + + D +SF
Sbjct: 148 DNILLDKDGHIKIADFGMCKENMLGDAK--TNEFCGTPDYIAPEILLGQKYNHSVDWWSF 205
Query: 144 GVVFLELITGR 154
GV+ E++ G+
Sbjct: 206 GVLLYEMLIGQ 216
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 70/148 (47%), Gaps = 20/148 (13%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA--------NPPV 76
L+ F GSL D+L + WN +A ++GL YLH+ P +
Sbjct: 90 LITAFHDKGSLTDYL-----KGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSI 144
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT- 135
+RDFKS N+LL+ L+DFGLA G + +GT Y APE + G +
Sbjct: 145 AHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPE-VLEGAINF 203
Query: 136 -----VKSDVYSFGVVFLELITGRKAID 158
++ D+Y+ G+V EL++ KA D
Sbjct: 204 QRDAFLRIDMYAMGLVLWELVSRCKAAD 231
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 64/131 (48%), Gaps = 9/131 (6%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
V E++ G L H+ D + AA GL++LH K ++YRD K
Sbjct: 94 FFVMEYLNGGDLMYHIQSC----HKFDLSRATFYAAEIILGLQFLHSKG---IVYRDLKL 146
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NILL++ H K++DFG+ K +GD + GT Y APE + + D +SF
Sbjct: 147 DNILLDKDGHIKIADFGMCKENMLGDAK--TNXFCGTPDYIAPEILLGQKYNHSVDWWSF 204
Query: 144 GVVFLELITGR 154
GV+ E++ G+
Sbjct: 205 GVLLYEMLIGQ 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVCEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 255 IVGEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 309
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 310 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 367
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 368 GILLTELTT 376
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 78 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 132
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 133 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 190
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 191 GILLTELTT 199
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 80 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 134
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 135 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 192
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 193 GILLTELTT 201
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 79 IVTEYMSKGSLLDFLKG--ETGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 133
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + APE A+ G+ T+KSDV+SF
Sbjct: 134 NILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 191
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 192 GILLTELTT 200
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 71/130 (54%), Gaps = 10/130 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ EFM GSL D L K+ L + +A A+G+ ++ + I+RD +++
Sbjct: 259 IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAA 313
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
NIL+ K++DFGLA+ V + + + R + + APE G T+KSDV+S
Sbjct: 314 NILVSASLVCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWS 370
Query: 143 FGVVFLELIT 152
FG++ +E++T
Sbjct: 371 FGILLMEIVT 380
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ EFM GSL D L K+ L + +A A+G+ ++ + I+RD +++
Sbjct: 86 IITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQIAEGMAFIEQRN---YIHRDLRAA 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ K++DFGLA++ + D + + + APE G T+KSDV+SF
Sbjct: 141 NILVSASLVCKIADFGLARV--IEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSF 198
Query: 144 GVVFLELIT 152
G++ +E++T
Sbjct: 199 GILLMEIVT 207
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 74/129 (57%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + ++A A G+ Y+ ++ N ++RD +++
Sbjct: 86 IVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV-ERMN--YVHRDLRAA 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 141 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 199 GILLTELTT 207
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVIEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD ++
Sbjct: 89 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLAAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 146 NILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M G L D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVMEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E++ GS D L P LD I KGL+YLH + I+RD K++
Sbjct: 97 IIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---IHRDIKAA 148
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+LL E KL+DFG+A G + D +GT + APE K+D++S G
Sbjct: 149 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 206
Query: 145 VVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY--PIRGLYQA 202
+ +EL G P L+ P P LEG Y P++ +A
Sbjct: 207 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 253
Query: 203 LAVASMCIQEQAATRP 218
C+ ++ + RP
Sbjct: 254 ------CLNKEPSFRP 263
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 256 IVTEYMSKGSLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 310
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGL +L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 311 NILVGENLVCKVADFGLGRL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 368
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 369 GILLTELTT 377
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 96/217 (44%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV+EFM G L D+L + T + + +G+ YL + +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAS-- 123
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 232
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 233 ----VYQ---IMNHCWKERPEDRPAFSRLLRQLAAIA 262
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M G L D L + L + +AA A G+ Y+ ++ N ++RD +++
Sbjct: 89 IVTEYMSKGCLLDFLKG--EMGKYLRLPQLVDMAAQIASGMAYV-ERMN--YVHRDLRAA 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + + APE A+ G+ T+KSDV+SF
Sbjct: 144 NILVGENLVCKVADFGLARL--IEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 202 GILLTELTT 210
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 76 LGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 132
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 189
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E++ GS D L P LD I KGL+YLH + I+RD K++
Sbjct: 82 IIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+LL E KL+DFG+A G + D +GT + APE K+D++S G
Sbjct: 134 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 145 VVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY--PIRGLYQA 202
+ +EL G P L+ P P LEG Y P++ +A
Sbjct: 192 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 238
Query: 203 LAVASMCIQEQAATRP 218
C+ ++ + RP
Sbjct: 239 ------CLNKEPSFRP 248
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E++ GS D L P LD I KGL+YLH + I+RD K++
Sbjct: 82 IIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---IHRDIKAA 133
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+LL E KL+DFG+A G + D +GT + APE K+D++S G
Sbjct: 134 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 191
Query: 145 VVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY--PIRGLYQA 202
+ +EL G P L+ P P LEG Y P++ +A
Sbjct: 192 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 238
Query: 203 LAVASMCIQEQAATRP 218
C+ ++ + RP
Sbjct: 239 ------CLNKEPSFRP 248
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV+EFM G L D+L + T + + +G+ YL +
Sbjct: 72 GVCLEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC-- 126
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 235
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 236 ----VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 265
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 84/196 (42%), Gaps = 31/196 (15%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E++ GS D L P LD I KGL+YLH + I+RD K++
Sbjct: 102 IIMEYLGGGSALDLLEPGP-----LDETQIATILREILKGLDYLHSEKK---IHRDIKAA 153
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+LL E KL+DFG+A G + D +GT + APE K+D++S G
Sbjct: 154 NVLLSEHGEVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG 211
Query: 145 VVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY--PIRGLYQA 202
+ +EL G P L+ P P LEG Y P++ +A
Sbjct: 212 ITAIELARGEPPHSELHPMKVLFLIPKNNP-------------PTLEGNYSKPLKEFVEA 258
Query: 203 LAVASMCIQEQAATRP 218
C+ ++ + RP
Sbjct: 259 ------CLNKEPSFRP 268
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV+EFM G L D+L + T + + +G+ YL +
Sbjct: 69 GVCLEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC-- 123
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 232
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 233 ----VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 262
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV+EFM G L D+L + T + + +G+ YL +
Sbjct: 89 GVCLEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC-- 143
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 252
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 253 ----VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +V E+MP G+L D+L + ++E + + +A + +EYL K
Sbjct: 94 LGVCTLEPPFYIVTEYMPYGNLLDYLREC--NREEVTAVVLLYMATQISSAMEYLEKKN- 150
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE
Sbjct: 151 --FIHRDLAARNCLVGENHVVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNT 207
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 208 FSIKSDVWAFGVLLWEIAT 226
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 95/217 (43%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV+EFM G L D+L + T + + +G+ YL +
Sbjct: 67 GVCLEQAPICLVFEFMEHGCLSDYLRT---QRGLFAAETLLGMCLDVCEGMAYLEEAC-- 121
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 230
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 231 ----VYQ---IMNHCWKERPEDRPAFSRLLRQLAEIA 260
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NI++ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 73/129 (56%), Gaps = 8/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D L + L + ++A A G+ Y+ ++ N ++RD +++
Sbjct: 86 IVTEYMNKGSLLDFLKG--ETGKYLRLPQLVDMSAQIASGMAYV-ERMN--YVHRDLRAA 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ E K++DFGLA+L + D + + + APE A+ G+ T+KSDV+SF
Sbjct: 141 NILVGENLVCKVADFGLARL--IEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 198
Query: 144 GVVFLELIT 152
G++ EL T
Sbjct: 199 GILLTELTT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 80 LGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NI++ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-------DKANPPVI 77
L+ F GSL D L + WN IA A+GL YLH D P +
Sbjct: 99 LITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAIS 153
Query: 78 YRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-- 135
+RD KS N+LL+ ++DFGLA G + + +GT Y APE + G +
Sbjct: 154 HRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE-VLEGAINFQ 212
Query: 136 ----VKSDVYSFGVVFLELITGRKAID 158
++ D+Y+ G+V EL + A D
Sbjct: 213 RDAFLRIDMYAMGLVLWELASRCTAAD 239
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NI++ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 93 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 145
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NI++ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 205
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 76 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 132
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 133 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNK 189
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 190 FSIKSDVWAFGVLLWEIAT 208
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 136
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E+M GSL D L K L + +A A+G+ Y+ K I+RD +++
Sbjct: 85 IITEYMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAA 139
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
N+L+ E K++DFGLA+ V + + + R + + APE G T+KSDV+S
Sbjct: 140 NVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVWS 196
Query: 143 FGVVFLELIT 152
FG++ E++T
Sbjct: 197 FGILLYEIVT 206
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 73 LGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 79 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 135
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 136 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 192
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 193 FSIKSDVWAFGVLLWEIAT 211
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAPAGAKFPIKWTAPESLAYNK 190
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E++ +L D +H P + +++ A A + L + H +I+RD K +
Sbjct: 110 IVMEYVDGVTLRDIVHTEGP----MTPKRAIEVIADACQALNFSHQNG---IIHRDVKPA 162
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
NI++ K+ DFG+A+ + G+ + V+GT Y +PE A + +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSL 222
Query: 144 GVVFLELITGRKAIDSTRP 162
G V E++TG P
Sbjct: 223 GCVLYEVLTGEPPFTGDSP 241
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTXTAHAGAKFPIKWTAPESLAYNK 186
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 88 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 144
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 145 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 201
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 202 FSIKSDVWAFGVLLWEIAT 220
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 77 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 133
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 134 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 190
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 191 FSIKSDVWAFGVLLWEIAT 209
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 15 GYCAD-GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C D G++ L LV E++PLGSL D+L + ++ + A +G+ YLH +
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHSQH 137
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM----GTYGYCAPEY 128
I+R+ + N+LL+ K+ DFGLAK P G H RV + APE
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPEC 191
Query: 129 AMTGQLTVKSDVYSFGVVFLELIT 152
+ SDV+SFGV EL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 321 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 377
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+R+ + N L+ E K++DFGL++L GD + APE +
Sbjct: 378 --FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 434
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 435 FSIKSDVWAFGVLLWEIAT 453
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ ++ + +A + +EYL K
Sbjct: 279 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN- 335
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+R+ + N L+ E K++DFGL++L GD + APE +
Sbjct: 336 --FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 392
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 393 FSIKSDVWAFGVLLWEIAT 411
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLP----PDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
D LV M G L+ H++ + P+ A+ + AA GLE LH + +
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEICCGLEDLHRER---I 307
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTV 136
+YRD K NILL++ H ++SD GLA P G + RV GT GY APE + T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 137 KSDVYSFGVVFLELITGR 154
D ++ G + E+I G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 80 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 136
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 137 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 193
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 194 FSIKSDVWAFGVLLWEIAT 212
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 68/138 (49%), Gaps = 16/138 (11%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLP----PDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
D LV M G L+ H++ + P+ A+ + AA GLE LH + +
Sbjct: 257 DALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFY------AAEICCGLEDLHRER---I 307
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTV 136
+YRD K NILL++ H ++SD GLA P G + RV GT GY APE + T
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--IKGRV-GTVGYMAPEVVKNERYTF 364
Query: 137 KSDVYSFGVVFLELITGR 154
D ++ G + E+I G+
Sbjct: 365 SPDWWALGCLLYEMIAGQ 382
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIIIEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ EFM GSL D L K L + +A A+G+ Y+ K I+RD +++
Sbjct: 84 IITEFMAKGSLLDFLKSDEGGKVLLP--KLIDFSAQIAEGMAYIERKN---YIHRDLRAA 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMTGQLTVKSDVYS 142
N+L+ E K++DFGLA+ V + + + R + + APE G T+KS+V+S
Sbjct: 139 NVLVSESLMCKIADFGLAR---VIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVWS 195
Query: 143 FGVVFLELIT 152
FG++ E++T
Sbjct: 196 FGILLYEIVT 205
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 74/142 (52%), Gaps = 13/142 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHD---LPPDKEALDWNTRMKIAAGAAKGLEYLHD 70
+G C +L V + MP G L DH+ + ++ L+W ++ AKG+ YL D
Sbjct: 85 LGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYLED 137
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+++RD + N+L++ H K++DFGLA+L + + + + + A E +
Sbjct: 138 VR---LVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESIL 194
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ T +SDV+S+GV EL+T
Sbjct: 195 RRRFTHQSDVWSYGVTVWELMT 216
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 73 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 129
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 130 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTFTAHAGAKFPIKWTAPESLAYNK 186
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 187 FSIKSDVWAFGVLLWEIAT 205
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 75 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K++DFGL++L GD + APE +
Sbjct: 132 --FIHRDLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 188
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 189 FSIKSDVWAFGVLLWEIAT 207
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 72/144 (50%), Gaps = 17/144 (11%)
Query: 15 GYCAD-GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C D G++ L LV E++PLGSL D+L + ++ + A +G+ YLH +
Sbjct: 83 GCCEDQGEKSLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQH 137
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM----GTYGYCAPEY 128
I+R+ + N+LL+ K+ DFGLAK P G H RV + APE
Sbjct: 138 ---YIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWYAPEC 191
Query: 129 AMTGQLTVKSDVYSFGVVFLELIT 152
+ SDV+SFGV EL+T
Sbjct: 192 LKEYKFYYASDVWSFGVTLYELLT 215
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 69/139 (49%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C ++ EFM G+L D+L + +++ + + +A + +EYL K
Sbjct: 282 LGVCTREPPFYIITEFMTYGNLLDYLREC--NRQEVSAVVLLYMATQISSAMEYLEKKN- 338
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+R+ + N L+ E K++DFGL++L GD + APE +
Sbjct: 339 --FIHRNLAARNCLVGENHLVKVADFGLSRLM-TGDTYTAHAGAKFPIKWTAPESLAYNK 395
Query: 134 LTVKSDVYSFGVVFLELIT 152
++KSDV++FGV+ E+ T
Sbjct: 396 FSIKSDVWAFGVLLWEIAT 414
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 117 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 171
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 172 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 229
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 230 YTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 70/144 (48%), Gaps = 17/144 (11%)
Query: 15 GYCAD-GDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C D G L LV E++PLGSL D+L + ++ + A +G+ YLH +
Sbjct: 100 GCCEDAGAASLQLVMEYVPLGSLRDYL-----PRHSIGLAQLLLFAQQICEGMAYLHAQH 154
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM----GTYGYCAPEY 128
I+RD + N+LL+ K+ DFGLAK P G H RV + APE
Sbjct: 155 ---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG---HEXYRVREDGDSPVFWYAPEC 208
Query: 129 AMTGQLTVKSDVYSFGVVFLELIT 152
+ SDV+SFGV EL+T
Sbjct: 209 LKEYKFYYASDVWSFGVTLYELLT 232
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 90 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 144
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 145 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 141
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 142 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 86 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 140
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 141 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 84 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 138
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 139 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 139
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 140 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 93 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 147
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 148 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 205
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 206 YTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 89 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 143
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 144 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 201
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 202 YTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C + LV EFM G L D+L + T + + +G+ YL +
Sbjct: 70 GVCLEQAPICLVTEFMEHGCLSDYLR---TQRGLFAAETLLGMCLDVCEGMAYLEEAC-- 124
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD + N L+ E K+SDFG+ + + D+ ST + +PE +
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRF-VLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRY 194
+ KSDV+SFGV+ E+ + K R + E + D +L PRL +
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIPYENRSNSE---------VVEDISTGFRLYKPRLASTH 233
Query: 195 PIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLA 231
+YQ + + C +E+ RP ++ L+ +A
Sbjct: 234 ----VYQ---IMNHCWRERPEDRPAFSRLLRQLAEIA 263
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 84 LGICLTSTVQLIM-QLMPFGXLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 138
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 139 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 196
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 144
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 145 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 139
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 140 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 144
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 145 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 140
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 141 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 140
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 141 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 108 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 162
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 163 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 220
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 221 YTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 86 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 140
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 141 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 198
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 199 YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 77 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 132 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 189
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 190 YTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIT-QLMPFGXLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 103/229 (44%), Gaps = 30/229 (13%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+++ E+M G+L+ L + + L ++ G A G++YL AN ++RD +
Sbjct: 122 MIITEYMENGALDKFLREKDGEFSVLQLVGMLR---GIAAGMKYL---ANMNYVHRDLAA 175
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLTVKSDV 140
NIL+ K+SDFGL+++ + D + G + APE + T SDV
Sbjct: 176 RNILVNSNLVCKVSDFGLSRV--LEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDV 233
Query: 141 YSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRGLY 200
+SFG+V E++T RP+ E + + + + R + + P +Y
Sbjct: 234 WSFGIVMWEVMT-----YGERPYWELSNHEVMKAINDGFRLPTPMDCP--------SAIY 280
Query: 201 QALAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHRGAGDKDDR 249
Q + C Q++ A RP D+V+ L L P+S + D D R
Sbjct: 281 QLMM---QCWQQERARRPKFADIVSILDKLIRA---PDSLKTLADFDPR 323
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 18 ADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH------D 70
ADG + LLV E+ P GSL +L DW + ++A +GL YLH D
Sbjct: 81 ADGRMEYLLVMEYYPNGSLXKYL-----SLHTSDWVSSCRLAHSVTRGLAYLHTELPRGD 135
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLA------KLGPVGDKSHVSTRVMGTYGYC 124
P + +RD S N+L++ +SDFGL+ +L G++ + + +GT Y
Sbjct: 136 HYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYM 195
Query: 125 APEYAMTGQLTVKS--------DVYSFGVVFLELI 151
APE + G + ++ D+Y+ G+++ E+
Sbjct: 196 APE-VLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 83 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 142
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++RD + N ++ F K+ DFG+ + D + + + APE
Sbjct: 143 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 199
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 200 SLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A A L++LH +IYRD K NILL+E H KL+DFGL+K +K S
Sbjct: 133 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 187
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE T +D +SFGV+ E++TG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A A L++LH +IYRD K NILL+E H KL+DFGL+K +K S
Sbjct: 133 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 187
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE T +D +SFGV+ E++TG
Sbjct: 188 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 222
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE + SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAG 230
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++RD + N ++ F K+ DFG+ + D + + + APE
Sbjct: 146 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A A L++LH +IYRD K NILL+E H KL+DFGL+K +K S
Sbjct: 134 AELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYS--FC 188
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE T +D +SFGV+ E++TG
Sbjct: 189 GTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 223
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 115 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 172 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 116 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 173 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 114 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 171 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 206
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++RD + N ++ F K+ DFG+ + D + + + APE
Sbjct: 146 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMAPE 202
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 113 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 170 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 205
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V E++ GSL D + + +D + + LE+LH VI+R
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 80 DFKSSNILLEEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
D KS NILL KL+DFG A++ P ++S ST V GT + APE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 197
Query: 139 DVYSFGVVFLELITG 153
D++S G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 79 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 138
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 139 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 195
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 196 SLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 143 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 200 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 235
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 148 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMSPE 204
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 139 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 196 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 231
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 230
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPP-----DKEALDWNTRMKIAAGAAKGLEYLHD 70
Y A + LV E+ GSL + LH P A+ W + ++G+ YLH
Sbjct: 68 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHS 121
Query: 71 KANPPVIYRDFKSSNILLEEGFHP-KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYA 129
+I+RD K N+LL G K+ DFG A ++H+ T G+ + APE
Sbjct: 122 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHM-TNNKGSAAWMAPEVF 176
Query: 130 MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPR 189
+ K DV+S+G++ E+IT RK D G + WA + N R P
Sbjct: 177 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWA--VHNGTR-------PP 225
Query: 190 LEGRYPIRGLYQAL-AVASMCIQEQAATRPLIGDVVTALSYL 230
L I+ L + + ++ + C + + RP + ++V +++L
Sbjct: 226 L-----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 262
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A A GL++LH +IYRD K NILL+E H KL+DFGL+K +K S
Sbjct: 137 AELALGLDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYS--FC 191
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE + +D +S+GV+ E++TG
Sbjct: 192 GTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTG 226
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 141 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 198 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 233
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 100/222 (45%), Gaps = 34/222 (15%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPP-----DKEALDWNTRMKIAAGAAKGLEYLHD 70
Y A + LV E+ GSL + LH P A+ W + ++G+ YLH
Sbjct: 67 YGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQ------CSQGVAYLHS 120
Query: 71 KANPPVIYRDFKSSNILLEEGFHP-KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYA 129
+I+RD K N+LL G K+ DFG A ++H++ G+ + APE
Sbjct: 121 MQPKALIHRDLKPPNLLLVAGGTVLKICDFGTA----CDIQTHMTNN-KGSAAWMAPEVF 175
Query: 130 MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPR 189
+ K DV+S+G++ E+IT RK D G + WA + N R P
Sbjct: 176 EGSNYSEKCDVFSWGIILWEVITRRKPFDEIG--GPAFRIMWA--VHNGTR-------PP 224
Query: 190 LEGRYPIRGLYQAL-AVASMCIQEQAATRPLIGDVVTALSYL 230
L I+ L + + ++ + C + + RP + ++V +++L
Sbjct: 225 L-----IKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHL 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 136 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 193 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 228
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 120 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 177 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 212
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 138 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 195 VGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAG 230
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C D ++ LV E++PLGSL D+L + + + A +G+ YLH +
Sbjct: 77 GCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQH 131
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV-----MGTYGYCAPE 127
I+R + N+LL+ K+ DFGLAK P G H RV + Y APE
Sbjct: 132 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWY-APE 184
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
+ SDV+SFGV EL+T
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 69/145 (47%), Gaps = 19/145 (13%)
Query: 15 GYCADGDQR--LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G C D ++ LV E++PLGSL D+L + + + A +G+ YLH +
Sbjct: 78 GCCEDQGEKSVQLVMEYVPLGSLRDYL-----PRHCVGLAQLLLFAQQICEGMAYLHAQH 132
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV-----MGTYGYCAPE 127
I+R + N+LL+ K+ DFGLAK P G H RV + Y APE
Sbjct: 133 ---YIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG---HEYYRVREDGDSPVFWY-APE 185
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
+ SDV+SFGV EL+T
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
A LEYLH K +I+RD K NILL E H +++DFG AK+ K +
Sbjct: 135 TAEIVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y +PE SD+++ G + +L+ G
Sbjct: 192 VGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAG 227
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 64/122 (52%), Gaps = 8/122 (6%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ +GL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 118 KVSIAVLRGLAYLREKHQ--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 171
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPL 175
+GT Y APE +V+SD++S G+ +EL GR I P ++ + RP+
Sbjct: 172 SFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPP--PDAKELEAIFGRPV 229
Query: 176 FN 177
+
Sbjct: 230 VD 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + A+G+ YL D+
Sbjct: 80 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAEGMNYLEDRR- 134
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLAKL +K + + + A E +
Sbjct: 135 --LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 192
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 193 YTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 70/159 (44%), Gaps = 10/159 (6%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHD-LPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
Y D + LV E G + +L + + P E N G+ YLH
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSE----NEARHFMHQIITGMLYLHSHG- 132
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD SN+LL + K++DFGLA + + H + + GT Y +PE A
Sbjct: 133 --ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEIATRSA 188
Query: 134 LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWA 172
++SDV+S G +F L+ GR D+ N V A
Sbjct: 189 HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLA 227
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV M G + H++++ D + A GLE+LH + +IYRD K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPE 318
Query: 85 NILLEEGFHPKLSDFGLA---KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
N+LL++ + ++SD GLA K G K + GT G+ APE + + D +
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYF 373
Query: 142 SFGVVFLELITGR 154
+ GV E+I R
Sbjct: 374 ALGVTLYEMIAAR 386
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV M G + H++++ D + A GLE+LH + +IYRD K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPE 318
Query: 85 NILLEEGFHPKLSDFGLA---KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
N+LL++ + ++SD GLA K G K + GT G+ APE + + D +
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYF 373
Query: 142 SFGVVFLELITGR 154
+ GV E+I R
Sbjct: 374 ALGVTLYEMIAAR 386
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V E++ GSL D + + +D + + LE+LH VI+R
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 80 DFKSSNILLEEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
D KS NILL KL+DFG A++ P K + ++GT + APE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 139 DVYSFGVVFLELITG 153
D++S G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV M G + H++++ D + A GLE+LH + +IYRD K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPE 318
Query: 85 NILLEEGFHPKLSDFGLA---KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
N+LL++ + ++SD GLA K G K + GT G+ APE + + D +
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYF 373
Query: 142 SFGVVFLELITGR 154
+ GV E+I R
Sbjct: 374 ALGVTLYEMIAAR 386
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 139
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 140 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 11/133 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV M G + H++++ D + A GLE+LH + +IYRD K
Sbjct: 262 LVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRN---IIYRDLKPE 318
Query: 85 NILLEEGFHPKLSDFGLA---KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
N+LL++ + ++SD GLA K G K + GT G+ APE + + D +
Sbjct: 319 NVLLDDDGNVRISDLGLAVELKAGQTKTKGYA-----GTPGFMAPELLLGEEYDFSVDYF 373
Query: 142 SFGVVFLELITGR 154
+ GV E+I R
Sbjct: 374 ALGVTLYEMIAAR 386
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 95/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 151
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ L D H T + A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 258
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 259 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 293
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 85 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 144
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++RD + N ++ F K+ DFG+ + D + + + APE
Sbjct: 145 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 201
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 202 SLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 154
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 155 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 209
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V E++ GSL D + + +D + + LE+LH VI+R
Sbjct: 89 GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 140
Query: 80 DFKSSNILLEEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
D KS NILL KL+DFG A++ P K + ++GT + APE K
Sbjct: 141 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 139 DVYSFGVVFLELITG 153
D++S G++ +E+I G
Sbjct: 198 DIWSLGIMAIEMIEG 212
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 85 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 139
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 140 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V E++ GSL D + + +D + + LE+LH VI+R
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 80 DFKSSNILLEEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
D KS NILL KL+DFG A++ P K + ++GT + APE K
Sbjct: 142 DIKSDNILLGMDGSVKLTDFGFCAQITPEQSK---RSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 139 DVYSFGVVFLELITG 153
D++S G++ +E+I G
Sbjct: 199 DIWSLGIMAIEMIEG 213
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 74/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L++ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 87 LGICLTSTVQLIM-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 141
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 142 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 199
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 200 YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L V + MP G L +++H+ K+ + + AKG+ YL ++
Sbjct: 106 LGVCLSPTIQL-VTQLMPHGCLLEYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEERR- 160
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLA+L +K + + + A E +
Sbjct: 161 --LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 218
Query: 134 LTVKSDVYSFGVVFLELIT 152
T +SDV+S+GV EL+T
Sbjct: 219 FTHQSDVWSYGVTIWELMT 237
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V E++ GSL D + + +D + + LE+LH VI+R
Sbjct: 90 GDELWVVMEYLAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHR 141
Query: 80 DFKSSNILLEEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
+ KS NILL KL+DFG A++ P ++S ST V GT + APE K
Sbjct: 142 NIKSDNILLGMDGSVKLTDFGFCAQITP--EQSKRSTMV-GTPYWMAPEVVTRKAYGPKV 198
Query: 139 DVYSFGVVFLELITG 153
D++S G++ +E+I G
Sbjct: 199 DIWSLGIMAIEMIEG 213
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 7/139 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L V + MP G L +++H+ K+ + + AKG+ YL ++
Sbjct: 83 LGVCLSPTIQL-VTQLMPHGCLLEYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEERR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFGLA+L +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYRK 195
Query: 134 LTVKSDVYSFGVVFLELIT 152
T +SDV+S+GV EL+T
Sbjct: 196 FTHQSDVWSYGVTIWELMT 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 90 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 144
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 145 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 202
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 203 YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR 116
I KGLEYLH I+RD K+ NILL H KL+DFG+A G + D
Sbjct: 130 ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA--GQLTDXMAKRNX 184
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRP 162
V+GT + APE +D++S G+ +E+ G+ P
Sbjct: 185 VIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP 230
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 85 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 139
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 140 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 197
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 198 YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++RD + N ++ F K+ DFG+ + D + + + APE
Sbjct: 146 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 92 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 145
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 146 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 200
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 73/146 (50%), Gaps = 8/146 (5%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+G C +L+ + MP G L D++ + K+ + + AKG+ YL D+
Sbjct: 83 LGICLTSTVQLIT-QLMPFGCLLDYVRE---HKDNIGSQYLLNWCVQIAKGMNYLEDRR- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
+++RD + N+L++ H K++DFG AKL +K + + + A E +
Sbjct: 138 --LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRI 195
Query: 134 LTVKSDVYSFGVVFLELIT-GRKAID 158
T +SDV+S+GV EL+T G K D
Sbjct: 196 YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 88 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 147
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 148 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 204
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 205 SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TELCGTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 141 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 85 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 144
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 145 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 201
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 202 SLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 147 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD---KEALDWNTRMKIAAGAAKGLEYLHD 70
YC+ GD ++EF+ + S + D K AL+ + + A A G+EYL
Sbjct: 108 FSYCSHGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL-- 161
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
++ V+++D + N+L+ + + K+SD GL + D + + + APE M
Sbjct: 162 -SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 220
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
G+ ++ SD++S+GVV E+ +
Sbjct: 221 YGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 72/142 (50%), Gaps = 10/142 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD---KEALDWNTRMKIAAGAAKGLEYLHD 70
YC+ GD ++EF+ + S + D K AL+ + + A A G+EYL
Sbjct: 91 FSYCSHGD----LHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYL-- 144
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
++ V+++D + N+L+ + + K+SD GL + D + + + APE M
Sbjct: 145 -SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIM 203
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
G+ ++ SD++S+GVV E+ +
Sbjct: 204 YGKFSIDSDIWSYGVVLWEVFS 225
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA GLE++H++ V+YRD K +NILL+E H ++SD GLA K H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 350
Query: 118 MGTYGYCAPEYAMTG-QLTVKSDVYSFGVVFLELITG 153
+GT+GY APE G +D +S G + +L+ G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKE----ALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
D+ LV + + GS+ D + + E LD +T I +GLEYLH
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--- 142
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVG---DKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD K+ NILL E +++DFG++ G ++ V +GT + APE +
Sbjct: 143 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 202
Query: 134 -LTVKSDVYSFGVVFLELITG 153
K+D++SFG+ +EL TG
Sbjct: 203 GYDFKADIWSFGITAIELATG 223
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA GLE++H++ V+YRD K +NILL+E H ++SD GLA K H S
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 349
Query: 118 MGTYGYCAPEYAMTG-QLTVKSDVYSFGVVFLELITG 153
+GT+GY APE G +D +S G + +L+ G
Sbjct: 350 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 386
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 87 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 146
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 147 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 203
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 204 SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 6/104 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 127 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 180
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDS 159
+GT Y +PE +V+SD++S G+ +E+ GR I S
Sbjct: 181 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGS 224
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKE----ALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
D+ LV + + GS+ D + + E LD +T I +GLEYLH
Sbjct: 81 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQ--- 137
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVG---DKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD K+ NILL E +++DFG++ G ++ V +GT + APE +
Sbjct: 138 IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVR 197
Query: 134 -LTVKSDVYSFGVVFLELITG 153
K+D++SFG+ +EL TG
Sbjct: 198 GYDFKADIWSFGITAIELATG 218
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 154 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 62/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 129
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P ++ +S GT Y PE
Sbjct: 130 -VIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLS----GTLDYLPPEMIEGRMH 184
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 10/139 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G G + ++ E++ GS D L P D+ + T +K KGL+YLH +
Sbjct: 88 GSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQI--ATMLK---EILKGLDYLHSEKK- 141
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
I+RD K++N+LL E KL+DFG+A G + D +GT + APE
Sbjct: 142 --IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNTFVGTPFWMAPEVIQQSAY 197
Query: 135 TVKSDVYSFGVVFLELITG 153
K+D++S G+ +EL G
Sbjct: 198 DSKADIWSLGITAIELAKG 216
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 133
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 134 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 188
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 91 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 144
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D +V + +CAPE T + SD + F
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 205 GVTLWEMFT 213
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA GLE++H++ V+YRD K +NILL+E H ++SD GLA K H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 350
Query: 118 MGTYGYCAPEYAMTG-QLTVKSDVYSFGVVFLELITG 153
+GT+GY APE G +D +S G + +L+ G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA GLE++H++ V+YRD K +NILL+E H ++SD GLA K H S
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHAS--- 350
Query: 118 MGTYGYCAPEYAMTG-QLTVKSDVYSFGVVFLELITG 153
+GT+GY APE G +D +S G + +L+ G
Sbjct: 351 VGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRG 387
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 133
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 134 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEXIEGRXH 188
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 116 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 175
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 176 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 232
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 233 SLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 17 CADGDQRLL-VYEFMPLGSLEDHLHDL--PPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
C + RL V E++ G L H+ P++ A ++ + +A L YLH++
Sbjct: 121 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 173
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGP-VGDKSHVSTRVMGTYGYCAPEYAMTG 132
+IYRD K N+LL+ H KL+D+G+ K G GD ++ GT Y APE
Sbjct: 174 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSTFCGTPNYIAPEILRGE 228
Query: 133 QLTVKSDVYSFGVVFLELITGRKAID 158
D ++ GV+ E++ GR D
Sbjct: 229 DYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 170 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 223
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 224 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 17 CADGDQRLL-VYEFMPLGSLEDHLHDL--PPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
C + RL V E++ G L H+ P++ A ++ + +A L YLH++
Sbjct: 89 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 141
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGP-VGDKSHVSTRVMGTYGYCAPEYAMTG 132
+IYRD K N+LL+ H KL+D+G+ K G GD ++ GT Y APE
Sbjct: 142 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGE 196
Query: 133 QLTVKSDVYSFGVVFLELITGRKAID 158
D ++ GV+ E++ GR D
Sbjct: 197 DYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 135 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 188
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 189 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 97 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 150
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D +V + +CAPE T + SD + F
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 211 GVTLWEMFT 219
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TXLCGTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 91 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 144
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D +V + +CAPE T + SD + F
Sbjct: 145 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 204
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 205 GVTLWEMFT 213
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 80 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 133
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 134 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH 188
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 54/103 (52%), Gaps = 9/103 (8%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
KI K L +L K N +I+RD K SNILL+ + KL DFG++ G + D S T
Sbjct: 129 KITLATVKALNHL--KENLKIIHRDIKPSNILLDRSGNIKLCDFGIS--GQLVD-SIAKT 183
Query: 116 RVMGTYGYCAPE----YAMTGQLTVKSDVYSFGVVFLELITGR 154
R G Y APE A V+SDV+S G+ EL TGR
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGR 226
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A L+YLH + N V+YRD K N++L++ H K++DFGL K G + D + + T
Sbjct: 258 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FC 313
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 349
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A L+YLH + N V+YRD K N++L++ H K++DFGL K G + D + + T
Sbjct: 255 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKT-FC 310
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 346
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 129
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 130 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH 184
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 132
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 133 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 187
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 74 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 127
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 128 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 182
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 87 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D +V + +CAPE T + SD + F
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 201 GVTLWEMFT 209
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 72 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 125
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 126 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 180
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEA 205
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 58/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 87 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D +V + +CAPE T + SD + F
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 201 GVTLWEMFT 209
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 18 ADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVI 77
A D LL E+ G L +L+ + L + + + L YLH+ +I
Sbjct: 89 APNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENR---II 144
Query: 78 YRDFKSSNILLEEG---FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+RD K NI+L+ G K+ D G AK D+ + T +GT Y APE +
Sbjct: 145 HRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKY 201
Query: 135 TVKSDVYSFGVVFLELITG 153
TV D +SFG + E ITG
Sbjct: 202 TVTVDYWSFGTLAFECITG 220
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 18 ADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVI 77
A D LL E+ G L +L+ + L + + + L YLH+ +I
Sbjct: 88 APNDLPLLAMEYCEGGDLRKYLNQFE-NCCGLKEGPIRTLLSDISSALRYLHENR---II 143
Query: 78 YRDFKSSNILLEEG---FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+RD K NI+L+ G K+ D G AK D+ + T +GT Y APE +
Sbjct: 144 HRDLKPENIVLQPGPQRLIHKIIDLGYAK---ELDQGELCTEFVGTLQYLAPELLEQKKY 200
Query: 135 TVKSDVYSFGVVFLELITG 153
TV D +SFG + E ITG
Sbjct: 201 TVTVDYWSFGTLAFECITG 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 87 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 146
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++R+ + N ++ F K+ DFG+ + D + + + APE
Sbjct: 147 LNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 203
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 204 SLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TDLCGTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
KIA K LE+LH K + VI+RD K SN+L+ K+ DFG++ G + D S T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVD-SVAKT 211
Query: 116 RVMGTYGYCAPEYAMTGQL-----TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVT 170
G Y APE + +L +VKSD++S G+ +EL R DS
Sbjct: 212 IDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS----------- 259
Query: 171 WARPLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRP 218
W P F ++ + P+L + + + S C+++ + RP
Sbjct: 260 WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 303
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 26/158 (16%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL+YLH + I+RD K++N+LL E KL+DFG+A G + D +GT
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQGDVKLADFGVA--GQLTDTQIKRNXFVGTPF 181
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKF 182
+ APE K+D++S G+ +EL G P R LF
Sbjct: 182 WMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP---------MRVLF----LI 228
Query: 183 SKLADPRLEGRY--PIRGLYQALAVASMCIQEQAATRP 218
K + P LEG++ P + +A C+ + RP
Sbjct: 229 PKNSPPTLEGQHSKPFKEFVEA------CLNKDPRFRP 260
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 17 CADGDQRLL-VYEFMPLGSLEDHLHDL--PPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
C + RL V E++ G L H+ P++ A ++ + +A L YLH++
Sbjct: 74 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 126
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGP-VGDKSHVSTRVMGTYGYCAPEYAMTG 132
+IYRD K N+LL+ H KL+D+G+ K G GD ++ GT Y APE
Sbjct: 127 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGE 181
Query: 133 QLTVKSDVYSFGVVFLELITGRKAID 158
D ++ GV+ E++ GR D
Sbjct: 182 DYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 16/146 (10%)
Query: 17 CADGDQRLL-VYEFMPLGSLEDHLHDL--PPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
C + RL V E++ G L H+ P++ A ++ + +A L YLH++
Sbjct: 78 CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA------LNYLHERG- 130
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGP-VGDKSHVSTRVMGTYGYCAPEYAMTG 132
+IYRD K N+LL+ H KL+D+G+ K G GD ++ GT Y APE
Sbjct: 131 --IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD---TTSXFCGTPNYIAPEILRGE 185
Query: 133 QLTVKSDVYSFGVVFLELITGRKAID 158
D ++ GV+ E++ GR D
Sbjct: 186 DYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ K ++R+ + N ++ F K+ DFG+ + D + + + APE
Sbjct: 146 LNAKK---FVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPE 202
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SD++SFGVV E+ +
Sbjct: 203 SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 19/150 (12%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L+V E M G L+ +L L P+ E +++AA A G+ Y
Sbjct: 86 LGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAY 145
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG----- 122
L+ K ++RD + N ++ F K+ DFG+ + D + G G
Sbjct: 146 LNAKK---FVHRDLAARNCMVAHDFTVKIGDFGMTR-----DIYETAYYRKGGKGLLPVR 197
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE G T SD++SFGVV E+ +
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 6/102 (5%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D ++
Sbjct: 108 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDS--MAN 161
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAI 157
+GT Y +PE +V+SD++S G+ +E+ GR I
Sbjct: 162 SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKE------ALDWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P+ E + +++A A G+ Y
Sbjct: 81 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMAY 140
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N + E F K+ DFG+ + D + + + +PE
Sbjct: 141 LN--ANK-FVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 197
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 198 SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
K++ KGL YL +K +++RD K SNIL+ KL DFG++ G + D+ ++
Sbjct: 111 KVSIAVIKGLTYLREKHK--IMHRDVKPSNILVNSRGEIKLCDFGVS--GQLIDE--MAN 164
Query: 116 RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
+GT Y +PE +V+SD++S G+ +E+ GR
Sbjct: 165 EFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 96/220 (43%), Gaps = 29/220 (13%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 149
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKS----HVSTRVMGTYGYCAPEY 128
+ ++RD + N +L+E F K++DFGLA+ + DK H T + A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEXXSVHNKTGAKLPVKWMALES 207
Query: 129 AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADP 188
T + T KSDV+SFGV+ EL+T P+ + N L RR
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 254
Query: 189 RLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
L+ Y LY+ + C +A RP ++V+ +S
Sbjct: 255 LLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 291
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG++YL A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---A 150
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TRVMGTYGYCAPEY 128
+ ++RD + N +L+E F K++DFGLA+ + DK + S T + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALES 208
Query: 129 AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADP 188
T + T KSDV+SFGV+ EL+T P+ + N L RR
Sbjct: 209 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 255
Query: 189 RLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 256 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 292
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 151
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 152 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 211
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 212 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 258
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 259 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG++YL A
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 142
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TRVMGTYGYCAPEY 128
+ ++RD + N +L+E F K++DFGLA+ + DK + S T + A E
Sbjct: 143 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALES 200
Query: 129 AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADP 188
T + T KSDV+SFGV+ EL+T P+ + N L RR
Sbjct: 201 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 247
Query: 189 RLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 248 LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 140 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 194
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 195 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 249
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 250 QGRR--------LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 290
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 150
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 292
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 137 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 191
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 192 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 246
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 247 QGRR--------LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 160 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 214
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 215 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 269
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 270 QGRR--------LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 310
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 101 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 154
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 155 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH 209
Query: 135 TVKSDVYSFGVVFLELITGRKAIDST 160
K D++S GV+ E + G+ ++
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEAN 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 150
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 151 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 210
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 211 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 257
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 258 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 97/220 (44%), Gaps = 29/220 (13%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG++YL A
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKD---LIGFGLQVAKGMKYL---A 149
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TRVMGTYGYCAPEY 128
+ ++RD + N +L+E F K++DFGLA+ + DK + S T + A E
Sbjct: 150 SKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVKWMALES 207
Query: 129 AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADP 188
T + T KSDV+SFGV+ EL+T P+ + N L RR
Sbjct: 208 LQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR-------- 254
Query: 189 RLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
L+ Y LY+ + C +A RP ++V+ +S
Sbjct: 255 LLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 291
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 139 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 193
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 194 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 248
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 249 QGRR--------LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 289
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 436 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 489
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 490 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 546
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 547 YKFSSKSDVWSFGVLMWEAFS 567
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 437 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 490
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 491 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 547
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 548 YKFSSKSDVWSFGVLMWEAFS 568
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ V EF+ G L H+ D AA L +LHDK +IYRD
Sbjct: 97 DRLFFVMEFVNGGDLMFHIQK----SRRFDEARARFYAAEIISALMFLHDKG---IIYRD 149
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDV 140
K N+LL+ H KL+DFG+ K G + + GT Y APE D
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVT--TATFCGTPDYIAPEILQEMLYGPAVDW 207
Query: 141 YSFGVVFLELITGRKAIDS 159
++ GV+ E++ G ++
Sbjct: 208 WAMGVLLYEMLCGHAPFEA 226
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 155
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 156 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 215
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 216 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 262
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 263 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 297
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 130
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K+++FG + P + T + GT Y PE
Sbjct: 131 -VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 185
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 97 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 150
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D V + +CAPE T + SD + F
Sbjct: 151 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 210
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 211 GVTLWEMFT 219
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 148
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 149 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 208
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 209 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 255
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 256 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 290
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 142 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 196
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 251
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ + C +A RP ++V+ +S
Sbjct: 252 QGRR--------LLQPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 292
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 14 IGYCADGD-QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+G C + L+V +M G L + + + + D + AKG+++L A
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---A 209
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ ++RD + N +L+E F K++DFGLA+ D H T + A E
Sbjct: 210 SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQ 269
Query: 131 TGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRL 190
T + T KSDV+SFGV+ EL+T P+ + N L RR L
Sbjct: 270 TQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLLQGRR--------LL 316
Query: 191 EGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
+ Y LY+ + C +A RP ++V+ +S
Sbjct: 317 QPEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRIS 351
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 25/172 (14%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS----TR 116
AKG++YL A+ ++RD + N +L+E F K++DFGLA+ + DK + S T
Sbjct: 161 VAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTG 215
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLF 176
+ A E T + T KSDV+SFGV+ EL+T P+ + N L
Sbjct: 216 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT-----RGAPPYPDVNTFDITVYLL 270
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALS 228
RR L+ Y LY+ V C +A RP ++V+ +S
Sbjct: 271 QGRR--------LLQPEYCPDPLYE---VMLKCWHPKAEMRPSFSELVSRIS 311
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---- 116
A+G+EYL A ++RD + N +L+E F K++DFGLA+ + D+ + S +
Sbjct: 133 VARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLAR--DILDREYYSVQQHRH 187
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT-GRKAIDSTRPHGEQNLVTWARPL 175
+ A E T + T KSDV+SFGV+ EL+T G P + + R
Sbjct: 188 ARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGR-- 245
Query: 176 FNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRP----LIGDVVTALSYLA 231
+L P Y LYQ V C + A RP L+G+V +S L
Sbjct: 246 --------RLPQP----EYCPDSLYQ---VMQQCWEADPAVRPTFRVLVGEVEQIVSALL 290
Query: 232 NQTY 235
Y
Sbjct: 291 GDHY 294
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P ++ + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 7/129 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E PLGSL D L + T + A A+G+ YL K I+RD +
Sbjct: 87 MVTELAPLGSLLDRLRK---HQGHFLLGTLSRYAVQVAEGMGYLESKR---FIHRDLAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
N+LL K+ DFGL + P D V + +CAPE T + SD + F
Sbjct: 141 NLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLKTRTFSHASDTWMF 200
Query: 144 GVVFLELIT 152
GV E+ T
Sbjct: 201 GVTLWEMFT 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDSTRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKK-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P ++ + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 84 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 137
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 138 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 194
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 195 YKFSSKSDVWSFGVLMWEAFS 215
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 77 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 130
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 131 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH 185
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 92 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 145
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 146 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 202
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 203 YKFSSKSDVWSFGVLMWEAFS 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 147
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFS 225
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 94 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 147
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 148 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 204
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 205 YKFSSKSDVWSFGVLMWEAFS 225
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K+++FG + P + T + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 72 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 125
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 126 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 182
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 183 YKFSSKSDVWSFGVLMWEAFS 203
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/239 (25%), Positives = 103/239 (43%), Gaps = 57/239 (23%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q L+ + GSL D L ++ L+ + +++A AA GL +LH + P +
Sbjct: 80 QLWLITHYHEHGSLYDFLQ-----RQTLEPHLALRLAVSAACGLAHLHVEIFGTQGKPAI 134
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGP-------VGDKSHVSTRVMGTYGYCAPEYA 129
+RDFKS N+L++ ++D GLA + +G+ V GT Y APE
Sbjct: 135 AHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-----GTKRYMAPE-V 188
Query: 130 MTGQLTVK-------SDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKF 182
+ Q+ +D+++FG+V E+ R+ I + +V RP F D
Sbjct: 189 LDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVN-------GIVEDYRPPFYDVVP- 238
Query: 183 SKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRP--LIGD-VVTALSYLANQTYDPN 238
DP E + +C+ +Q T P L D V++ L+ + + + PN
Sbjct: 239 ---NDPSFEDMKKV-----------VCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPN 283
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P ++ + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALC----GTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 188
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFS 209
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDL--------------------PPDKEALDWNTR 54
G C+ LL+ E+ GSL L + PD+ AL
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 114
+ A ++G++YL A +++RD + NIL+ EG K+SDFGL++ V ++
Sbjct: 153 ISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXV 207
Query: 115 TRVMG--TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
R G + A E T +SDV+SFGV+ E++T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 72/141 (51%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 74 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 127
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D+++ + G + + APE
Sbjct: 128 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENYYKAQTHGKWPVKWYAPECINY 184
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 185 YKFSSKSDVWSFGVLMWEAFS 205
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDL--------------------PPDKEALDWNTR 54
G C+ LL+ E+ GSL L + PD+ AL
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 114
+ A ++G++YL A +++RD + NIL+ EG K+SDFGL++ V ++
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSXV 207
Query: 115 TRVMG--TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
R G + A E T +SDV+SFGV+ E++T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 67/137 (48%), Gaps = 10/137 (7%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
+ D LV E++ +L +++ P L +T + G+++ HD +++
Sbjct: 82 EDDCYYLVMEYIEGPTLSEYIESHGP----LSVDTAINFTNQILDGIKHAHDMR---IVH 134
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST-RVMGTYGYCAPEYAMTGQLTVK 137
RD K NIL++ K+ DFG+AK + + S T V+GT Y +PE A
Sbjct: 135 RDIKPQNILIDSNKTLKIFDFGIAK--ALSETSLTQTNHVLGTVQYFSPEQAKGEATDEC 192
Query: 138 SDVYSFGVVFLELITGR 154
+D+YS G+V E++ G
Sbjct: 193 TDIYSIGIVLYEMLVGE 209
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 76 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 129
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 130 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMH 184
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 75 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 128
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 129 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH 183
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L YLH++ VI+R
Sbjct: 114 GDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----TVCLSVLRALSYLHNQG---VIHR 165
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 166 DIKSDSILLTSDGRIKLSDFGFC--AQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVD 223
Query: 140 VYSFGVVFLELITG 153
++S G++ +E+I G
Sbjct: 224 IWSLGIMVIEMIDG 237
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 58/139 (41%), Gaps = 11/139 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALSYCHSKR-- 132
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 133 -VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 187
Query: 135 TVKSDVYSFGVVFLELITG 153
K D++S GV+ E + G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPP---DKEAL---DWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P + L + +++A A G+ Y
Sbjct: 84 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 143
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 144 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 200
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 201 SLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 72/160 (45%), Gaps = 27/160 (16%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDL--------------------PPDKEALDWNTR 54
G C+ LL+ E+ GSL L + PD+ AL
Sbjct: 93 GACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDL 152
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 114
+ A ++G++YL A +++RD + NIL+ EG K+SDFGL++ V ++
Sbjct: 153 ISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSR--DVYEEDSYV 207
Query: 115 TRVMG--TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
R G + A E T +SDV+SFGV+ E++T
Sbjct: 208 KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 60/113 (53%), Gaps = 11/113 (9%)
Query: 47 EALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGP 106
+ LDW ++ +A L+++HD+ +++RD KS NI L + +L DFG+A++
Sbjct: 126 QILDWFVQICLA------LKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARV-- 174
Query: 107 VGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDS 159
+ ++ +GT Y +PE KSD+++ G V EL T + A ++
Sbjct: 175 LNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLC----GTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + + T
Sbjct: 115 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FC 169
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 205
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + + T
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FC 166
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQV 159
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 160 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDXXKKTTN 211
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+L+ K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIHS-AN--VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATR 211
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + + T
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKT-FC 166
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 78 GYFHDATRVYLILEYAPLGTVYRELQKL----SKFDEQRTATYITELANALSYCHSKR-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 132 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLC----GTLDYLPPEMIEGRMH 186
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPP---DKEAL---DWNTRMKIAAGAAKGLEY 67
+G + G L++ E M G L+ +L L P + L + +++A A G+ Y
Sbjct: 94 LGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAY 153
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
L+ AN ++RD + N ++ E F K+ DFG+ + D + + + +PE
Sbjct: 154 LN--ANK-FVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPE 210
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
G T SDV+SFGVV E+ T
Sbjct: 211 SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 133 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 159
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 160 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 211
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 59/145 (40%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ P G + L L D A L Y H K
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELANALSYCHSKR-- 133
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + T + GT Y PE
Sbjct: 134 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----TTLCGTLDYLPPEMIEGRMH 188
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 143 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 140 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 196
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 141 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 197
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 198 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 132 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 188
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 189 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 133 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 189
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 190 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C Q+ +Y M L D L L + L T +++ AA G+EYL K
Sbjct: 178 IGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K+SDFG+++ G + + APE G+
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGR 291
Query: 134 LTVKSDVYSFGVVFLELIT 152
+ +SDV+SFG++ E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 89 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 148
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 149 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 200
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 201 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 236
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 92 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 151
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 152 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 203
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 204 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 239
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 135 RGLKYIH-SAN--VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 155 RGLKYIHS-AN--VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 19/144 (13%)
Query: 21 DQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
D+RL + E++ G+L + + W+ R+ A A G+ YLH +I+R
Sbjct: 79 DKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLHSMN---IIHR 132
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKL------GPVGDKS------HVSTRVMGTYGYCAPE 127
D S N L+ E + ++DFGLA+L P G +S V+G + APE
Sbjct: 133 DLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPE 192
Query: 128 YAMTGQLTVKSDVYSFGVVFLELI 151
K DV+SFG+V E+I
Sbjct: 193 MINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 85 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQV 144
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 145 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 196
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 197 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 232
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 11/141 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + + +LV E LG L +L ++ D N +++ + G++YL +
Sbjct: 78 IGIC-EAESWMLVMEMAELGPLNKYLQQ---NRHVKDKNI-IELVHQVSMGMKYLEESN- 131
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY--GYCAPEYAMT 131
++RD + N+LL + K+SDFGL+K D++ + G + + APE
Sbjct: 132 --FVHRDLAARNVLLVTQHYAKISDFGLSK-ALRADENXYKAQTHGKWPVKWYAPECINY 188
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV+SFGV+ E +
Sbjct: 189 YKFSSKSDVWSFGVLMWEAFS 209
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 159
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 160 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 211
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 93 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 152
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 153 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 204
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 205 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 240
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + T + T
Sbjct: 137 RGLKYIH-SAN--VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 72/146 (49%), Gaps = 11/146 (7%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH---DLPPDKE---ALDWNTRMKIAAGAAKGLEY 67
+G C G L++ E+ G L + L + DKE L+ + ++ A+G+ +
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAF 175
Query: 68 LHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH-VSTRVMGTYGYCAP 126
L A+ I+RD + N+LL G K+ DFGLA+ + D ++ V + AP
Sbjct: 176 L---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWMAP 231
Query: 127 EYAMTGQLTVKSDVYSFGVVFLELIT 152
E TV+SDV+S+G++ E+ +
Sbjct: 232 ESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 65/139 (46%), Gaps = 6/139 (4%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C Q+ +Y M L D L L + L T +++ AA G+EYL K
Sbjct: 178 IGVCT---QKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKC- 233
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N L+ E K+SDFG+++ G + + APE G+
Sbjct: 234 --CIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGR 291
Query: 134 LTVKSDVYSFGVVFLELIT 152
+ +SDV+SFG++ E +
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 66/159 (41%), Gaps = 23/159 (14%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEA--------------------LDWNT 53
+G CA G L++E+M G L + L + P L
Sbjct: 116 LGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAE 175
Query: 54 RMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV 113
++ IA A G+ YL ++ ++RD + N L+ E K++DFGL++ D
Sbjct: 176 QLCIARQVAAGMAYLSERK---FVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKA 232
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ PE + T +SDV+++GVV E+ +
Sbjct: 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A L+YLH + N V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 117 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FC 172
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 208
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 141 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV 200
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 201 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 252
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 253 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 288
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A L+YLH + N V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 116 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FC 171
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A L+YLH + N V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 115 AEIVSALDYLHSEKN--VVYRDLKLENLMLDKDGHIKITDFGLCKEG-IKDGATMKX-FC 170
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 69/156 (44%), Gaps = 25/156 (16%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E L + A
Sbjct: 100 LGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQV 159
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL K I+RD + N+L+ E K++DFGLA+ D H+ T
Sbjct: 160 ARGMEYLASKK---CIHRDLAARNVLVTEDNVMKIADFGLAR-----DIHHIDYYKKTTN 211
Query: 122 G-----YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
G + APE T +SDV+SFGV+ E+ T
Sbjct: 212 GRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFT 247
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH-----DLPPDKE---ALDWNTRMKIAAGAAKGL 65
+G C G L++ E+ G L + L DL DKE L+ + ++ A+G+
Sbjct: 108 LGACTHGGPVLVITEYCCYGDLLNFLRRKAEADL--DKEDGRPLELRDLLHFSSQVAQGM 165
Query: 66 EYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH-VSTRVMGTYGYC 124
+L A+ I+RD + N+LL G K+ DFGLA+ + D ++ V +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLPVKWM 221
Query: 125 APEYAMTGQLTVKSDVYSFGVVFLELIT 152
APE TV+SDV+S+G++ E+ +
Sbjct: 222 APESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 30/162 (18%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH-------------------DLPPDKEALDWNTR 54
+G C L++E+ G L ++L + D L +
Sbjct: 115 LGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL 174
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 114
+ A AKG+E+L K+ ++RD + N+L+ G K+ DFGLA+ + D ++V
Sbjct: 175 LCFAYQVAKGMEFLEFKS---CVHRDLAARNVLVTHGKVVKICDFGLAR-DIMSDSNYV- 229
Query: 115 TRVMGT----YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
V G + APE G T+KSDV+S+G++ E+ +
Sbjct: 230 --VRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 79/169 (46%), Gaps = 28/169 (16%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
KIA K LE+LH K + VI+RD K SN+L+ K+ DFG++ G + D V+
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS--GYLVDD--VAK 166
Query: 116 RV-MGTYGYCAPEYAMTGQL-----TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLV 169
+ G Y APE + +L +VKSD++S G+ +EL R DS
Sbjct: 167 DIDAGCKPYMAPE-RINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS---------- 215
Query: 170 TWARPLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRP 218
W P F ++ + P+L + + + S C+++ + RP
Sbjct: 216 -WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 259
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 117 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FC 171
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 207
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FC 166
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ V E++ G L H+ + KE + AA + GL +LH + +IYRD
Sbjct: 93 DRLYFVMEYVNGGDLMYHIQQVGKFKEP----QAVFYAAEISIGLFFLHKRG---IIYRD 145
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSD 139
K N++L+ H K++DFG+ K + V+TR GT Y APE D
Sbjct: 146 LKLDNVMLDSEGHIKIADFGMCKEHMM---DGVTTREFCGTPDYIAPEIIAYQPYGKSVD 202
Query: 140 VYSFGVVFLELITGRKAID 158
+++GV+ E++ G+ D
Sbjct: 203 WWAYGVLLYEMLAGQPPFD 221
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL----HDLPPDKEA--------LDWNTRMKIAAG 60
+G C G +++ EF G+L +L ++ P KEA L + +
Sbjct: 99 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQ 158
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 159 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 214
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 215 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 247
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 11/139 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ PLG++ L L D A L Y H K
Sbjct: 79 GYFHDATRVYLILEYAPLGTVYRELQKL----SRFDEQRTATYITELANALSYCHSKR-- 132
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 133 -VIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRD----TLCGTLDYLPPEMIEGRMH 187
Query: 135 TVKSDVYSFGVVFLELITG 153
K D++S GV+ E + G
Sbjct: 188 DEKVDLWSLGVLCYEFLVG 206
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 29 FMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL 88
++ L +E LH + + L +GL+Y+H VI+RD K SN+L+
Sbjct: 136 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLV 192
Query: 89 EEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAMT-GQLTVKSDVYSFGV 145
E K+ DFG+A+ + + T + T Y APE ++ + T D++S G
Sbjct: 193 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 252
Query: 146 VFLELITGRK 155
+F E++ R+
Sbjct: 253 IFGEMLARRQ 262
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 62/130 (47%), Gaps = 6/130 (4%)
Query: 29 FMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL 88
++ L +E LH + + L +GL+Y+H VI+RD K SN+L+
Sbjct: 135 YVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ---VIHRDLKPSNLLV 191
Query: 89 EEGFHPKLSDFGLAK--LGPVGDKSHVSTRVMGTYGYCAPEYAMT-GQLTVKSDVYSFGV 145
E K+ DFG+A+ + + T + T Y APE ++ + T D++S G
Sbjct: 192 NENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGC 251
Query: 146 VFLELITGRK 155
+F E++ R+
Sbjct: 252 IFGEMLARRQ 261
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 62/125 (49%), Gaps = 10/125 (8%)
Query: 28 EFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNIL 87
EF G+LE + +K LD +++ KG++Y+H K +I+RD K SNI
Sbjct: 114 EFCDKGTLEQWIEKRRGEK--LDKVLALELFEQITKGVDYIHSK---KLIHRDLKPSNIF 168
Query: 88 LEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVV 146
L + K+ DFGL L G + TR GT Y +PE + + D+Y+ G++
Sbjct: 169 LVDTKQVKIGDFGLVTSLKNDGKR----TRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 224
Query: 147 FLELI 151
EL+
Sbjct: 225 LAELL 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FC 166
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A LEYLH + V+YRD K N++L++ H K++DFGL K G + D + +
Sbjct: 112 AEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCKEG-ISDGATMKX-FC 166
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
GT Y APE D + GVV E++ GR
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGR 202
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 12/105 (11%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS 114
K+ K L YL +K VI+RD K SNILL+E KL DFG++ +L V DK+
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRL--VDDKA--K 181
Query: 115 TRVMGTYGYCAPEYAMTGQLT-----VKSDVYSFGVVFLELITGR 154
R G Y APE T +++DV+S G+ +EL TG+
Sbjct: 182 DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQ 226
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 58/145 (40%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
GY D + L+ E+ P G + L L D A L Y H K
Sbjct: 80 GYFHDATRVYLILEYAPRGEVYKELQKL----SKFDEQRTATYITELANALSYCHSKR-- 133
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P + + GT Y PE
Sbjct: 134 -VIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR----XXLXGTLDYLPPEMIEGRMH 188
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++S GV+ E + G+ ++
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHD-----KANPPV 76
Q L+ ++ GSL D+L LD + +K+A + GL +LH + P +
Sbjct: 109 QLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAI 163
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV----STRVMGTYGYCAPEYAMTG 132
+RD KS NIL+++ ++D GLA + + D + V +TRV GT Y PE
Sbjct: 164 AHRDLKSKNILVKKNGTCCIADLGLA-VKFISDTNEVDIPPNTRV-GTKRYMPPEVLDES 221
Query: 133 ------QLTVKSDVYSFGVVFLEL 150
Q + +D+YSFG++ E+
Sbjct: 222 LNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A + L +LH K +IYRD K NI+L H KL+DFGL K + D + V+
Sbjct: 128 AEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHXFC 182
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE M D +S G + +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH +++RD K NIL+ G KL+DFGLA+ + T V+ T
Sbjct: 131 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALTPVVVTLW 184
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
Y APE + D++S G +F E+
Sbjct: 185 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 213
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 48/95 (50%), Gaps = 5/95 (5%)
Query: 59 AGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
A + L +LH K +IYRD K NI+L H KL+DFGL K + D + V+
Sbjct: 128 AEISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCK-ESIHDGT-VTHTFC 182
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE M D +S G + +++TG
Sbjct: 183 GTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTG 217
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + + T
Sbjct: 139 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 195
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG-PVGDKSHVSTRVMGTY 121
+GL+Y+H AN V++RD K SN+LL K+ DFGLA++ P D + + T
Sbjct: 140 RGLKYIH-SAN--VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATR 196
Query: 122 GYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGR 154
Y APE + + KS D++S G + E+++ R
Sbjct: 197 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
DQ LV EF GS+ D + + + +W I +GL +LH VI+RD
Sbjct: 100 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICREILRGLSHLHQHK---VIHRD 154
Query: 81 FKSSNILLEEGFHPKLSDFGL-AKLG-PVGDKSHVSTRVMGTYGYCAPEYAMTGQ----- 133
K N+LL E KL DFG+ A+L VG ++ +GT + APE +
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRN----TFIGTPYWMAPEVIACDENPDAT 210
Query: 134 LTVKSDVYSFGVVFLELITGRKAIDSTRP 162
KSD++S G+ +E+ G + P
Sbjct: 211 YDFKSDLWSLGITAIEMAEGAPPLCDMHP 239
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 63/130 (48%), Gaps = 14/130 (10%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D+L + L + +K + + +EYL ++RD +
Sbjct: 92 IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAAR 146
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAMTGQLTVKSDVYS 142
N+L+ E K+SDFGL K ST+ G + APE + + KSDV+S
Sbjct: 147 NVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWS 199
Query: 143 FGVVFLELIT 152
FG++ E+ +
Sbjct: 200 FGILLWEIYS 209
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
G++ ++ EF+ G+L D + + ++E + + + L YLH + VI+R
Sbjct: 114 GEELWVLMEFLQGGALTDIVSQVRLNEEQIA-----TVCEAVLQALAYLHAQG---VIHR 165
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG + ++GT + APE + D
Sbjct: 166 DIKSDSILLTLDGRVKLSDFGFC--AQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVD 223
Query: 140 VYSFGVVFLELITGRKAIDSTRP 162
++S G++ +E++ G S P
Sbjct: 224 IWSLGIMVIEMVDGEPPYFSDSP 246
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 17/152 (11%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH-DLPP-----------DKEALDWNTRMKIAAGA 61
+G C G L++ E+ G L + L PP +E L + ++
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQV 175
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH-VSTRVMGT 120
A+G+ +L K I+RD + N+LL G K+ DFGLA+ + D ++ V
Sbjct: 176 AQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIVKGNARLP 231
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE TV+SDV+S+G++ E+ +
Sbjct: 232 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ V E++ G L H+ + KE + AA A GL +L K +IYRD
Sbjct: 415 DRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQSKG---IIYRD 467
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR-VMGTYGYCAPEYAMTGQLTVKSD 139
K N++L+ H K++DFG+ K + D V+T+ GT Y APE D
Sbjct: 468 LKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVD 524
Query: 140 VYSFGVVFLELITGRKAID 158
++FGV+ E++ G+ +
Sbjct: 525 WWAFGVLLYEMLAGQAPFE 543
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D+L + L + +K + + +EYL ++RD +
Sbjct: 77 IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAAR 131
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAMTGQLTVKSDVYS 142
N+L+ E K+SDFGL K ST+ G + APE + + KSDV+S
Sbjct: 132 NVLVSEDNVAKVSDFGLTKEAS-------STQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 143 FGVVFLEL 150
FG++ E+
Sbjct: 185 FGILLWEI 192
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 14/128 (10%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D+L + L + +K + + +EYL ++RD +
Sbjct: 83 IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAAR 137
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--YGYCAPEYAMTGQLTVKSDVYS 142
N+L+ E K+SDFGL K ST+ G + APE + KSDV+S
Sbjct: 138 NVLVSEDNVAKVSDFGLT-------KEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 143 FGVVFLEL 150
FG++ E+
Sbjct: 191 FGILLWEI 198
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 61/127 (48%), Gaps = 12/127 (9%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E+M GSL D+L + L + +K + + +EYL ++RD +
Sbjct: 264 IVTEYMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNN---FVHRDLAAR 318
Query: 85 NILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ E K+SDFGL K D + + + APE + + KSDV+SF
Sbjct: 319 NVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVK------WTAPEALREKKFSTKSDVWSF 372
Query: 144 GVVFLEL 150
G++ E+
Sbjct: 373 GILLWEI 379
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G G ++V EFM G+L+ L + ++ G A G+ YL D
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLR---GIAAGMRYLADMG-- 165
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG--YCAPEYAMTG 132
++RD + NIL+ K+SDFGL+++ D V T G + APE
Sbjct: 166 -YVHRDLAARNILVNSNLVCKVSDFGLSRVIE-DDPEAVYTTTGGKIPVRWTAPEAIQYR 223
Query: 133 QLTVKSDVYSFGVVFLELIT 152
+ T SDV+S+G+V E+++
Sbjct: 224 KFTSASDVWSYGIVMWEVMS 243
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 76 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 130
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 131 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 189
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 190 NMKHFESFKRADIYAMGLVFWEI 212
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHD---LPPD---------KEALDWNTRMKIAAGA 61
+G C L E+ P G+L D L L D L + AA
Sbjct: 92 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 151
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G++YL K I+RD + NIL+ E + K++DFGL++ G + +V + MG
Sbjct: 152 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 203
Query: 122 G--YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ A E T SDV+S+GV+ E+++
Sbjct: 204 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHD---LPPD---------KEALDWNTRMKIAAGA 61
+G C L E+ P G+L D L L D L + AA
Sbjct: 82 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 141
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G++YL K I+RD + NIL+ E + K++DFGL++ G + +V + MG
Sbjct: 142 ARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 193
Query: 122 G--YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ A E T SDV+S+GV+ E+++
Sbjct: 194 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 81 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 135
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 136 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 194
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 195 NMKHFESFKRADIYAMGLVFWEI 217
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 78 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 132
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 133 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 191
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 192 NMKHFESFKRADIYAMGLVFWEI 214
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGLA++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 75 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 129
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 130 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 188
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 189 NMKHFESFKRADIYAMGLVFWEI 211
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 88 LGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 147
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 203
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 204 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 101 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 155
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 156 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 214
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 215 NMKHFESFKRADIYAMGLVFWEI 237
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 88 LGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 147
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 203
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 204 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ V E++ G L H+ + KE + AA A GL +L K +IYRD
Sbjct: 94 DRLYFVMEYVNGGDLMYHIQQVGRFKEP----HAVFYAAEIAIGLFFLQSKG---IIYRD 146
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM-GTYGYCAPEYAMTGQLTVKSD 139
K N++L+ H K++DFG+ K + D V+T+ GT Y APE D
Sbjct: 147 LKLDNVMLDSEGHIKIADFGMCKEN-IWDG--VTTKXFCGTPDYIAPEIIAYQPYGKSVD 203
Query: 140 VYSFGVVFLELITGRKAID 158
++FGV+ E++ G+ +
Sbjct: 204 WWAFGVLLYEMLAGQAPFE 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 115 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 171
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 172 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 16/136 (11%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
LV++ M G L D+L +K AL I + + +LH AN +++RD K
Sbjct: 176 FLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLEAVSFLH--ANN-IVHRDLKP 228
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTV------K 137
NILL++ +LSDFG + G+K + GT GY APE +
Sbjct: 229 ENILLDDNMQIRLSDFGFSCHLEPGEKLR---ELCGTPGYLAPEILKCSMDETHPGYGKE 285
Query: 138 SDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 286 VDLWACGVILFTLLAG 301
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 212
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 213 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 74/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 193
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 194 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 249
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 250 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 282
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAID 158
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 4/96 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAID 158
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD--KEALDWNTRMKIAAGA 61
+G C G +++ EF G+L +L + P D K+ L + +
Sbjct: 98 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQV 157
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
AKG+E+L A+ I+RD + NILL E K+ DFGLA+
Sbjct: 158 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 94 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 153
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 154 ARGMEYL---ASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 210
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 211 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q LV ++ GSL D+L+ E + +K+A A GL +LH + P +
Sbjct: 114 QLWLVSDYHEHGSLFDYLNRYTVTVEGM-----IKLALSTASGLAHLHMEIVGTQGKPAI 168
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVS-TRVMGTYGYCAPEYAMTGQL 134
+RD KS NIL+++ ++D GLA + D ++ +GT Y APE + +
Sbjct: 169 AHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPE-VLDDSI 227
Query: 135 TVK-------SDVYSFGVVFLEL 150
+K +D+Y+ G+VF E+
Sbjct: 228 NMKHFESFKRADIYAMGLVFWEI 250
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q L+ + +GSL D+L LD + ++I A GL +LH + P +
Sbjct: 109 QLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 163
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGP-------VGDKSHVSTRVMGTYGYCAPEYA 129
+RD KS NIL+++ ++D GLA + VG+ V GT Y APE
Sbjct: 164 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVL 218
Query: 130 -MTGQLTV-----KSDVYSFGVVFLEL 150
T Q+ + D+++FG+V E+
Sbjct: 219 DETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 153 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 212
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 213 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 269
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 270 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q L+ + +GSL D+L LD + ++I A GL +LH + P +
Sbjct: 80 QLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGP-------VGDKSHVSTRVMGTYGYCAPEYA 129
+RD KS NIL+++ ++D GLA + VG+ V GT Y APE
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVL 189
Query: 130 -MTGQLTV-----KSDVYSFGVVFLEL 150
T Q+ + D+++FG+V E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 99 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 158
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 159 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 215
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 216 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 96 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 155
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 156 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 212
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 213 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 117 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 173
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 174 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 210
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 93 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 144
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 205 WSYGIVLWEVMS 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ YLH + +RD K N+LL+E + K+SDFGLA + ++ + ++ GT Y
Sbjct: 116 GVVYLHGIG---ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPY 172
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDS 159
APE + + DV+S G+V ++ G D
Sbjct: 173 VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 209
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL----HDLPPDKEA----LDWNTRMKIAAGAAKG 64
+G C G +++ EF G+L +L ++ P K+ L + + AKG
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKG 156
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRVMGTY 121
+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 157 MEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLAR-DIYKDPDYVRKGDARL--PL 210
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV E+ LGS D L K+ L + GA +GL YLH +I+RD K+
Sbjct: 131 LVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAG 183
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKSDVY 141
NILL E KL DFG A + + +GT + APE + GQ K DV+
Sbjct: 184 NILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVW 237
Query: 142 SFGVVFLEL 150
S G+ +EL
Sbjct: 238 SLGITCIEL 246
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRM---KIAA---GAAKGLEYLHDKAN 73
GD+ +V EF+ G+L D + +TRM +IAA + L LH +
Sbjct: 220 GDELWVVMEFLEGGALTD-----------IVTHTRMNEEQIAAVCLAVLQALSVLHAQG- 267
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
VI+RD KS +ILL KLSDFG V + ++GT + APE
Sbjct: 268 --VIHRDIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLP 323
Query: 134 LTVKSDVYSFGVVFLELITG 153
+ D++S G++ +E++ G
Sbjct: 324 YGPEVDIWSLGIMVIEMVDG 343
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH V++RD K NIL+ KL+DFGLA+ + T V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLW 184
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
Y APE + D++S G +F E+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMF 213
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 78/169 (46%), Gaps = 28/169 (16%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVST 115
KIA K LE+LH K + VI+RD K SN+L+ K DFG++ G + D V+
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS--GYLVDD--VAK 193
Query: 116 RV-MGTYGYCAPEYAMTGQL-----TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLV 169
+ G Y APE + +L +VKSD++S G+ +EL R DS
Sbjct: 194 DIDAGCKPYXAPE-RINPELNQKGYSVKSDIWSLGITXIELAILRFPYDS---------- 242
Query: 170 TWARPLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRP 218
W P F ++ + P+L + + + S C+++ + RP
Sbjct: 243 -WGTP-FQQLKQVVEEPSPQLPAD---KFSAEFVDFTSQCLKKNSKERP 286
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAA---GAAKGLEYLH 69
G G ++V E+M GSL+ L HD T M++ G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHD--------GQFTIMQLVGMLRGVGAGMRYLS 168
Query: 70 DKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEY 128
D ++RD + N+L++ K+SDFGL++ L D ++ +T + APE
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEA 225
Query: 129 AMTGQLTVKSDVYSFGVVFLELI 151
+ SDV+SFGVV E++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVL 248
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + +LV E G L L +E + + ++ + G++YL +K
Sbjct: 76 IGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN- 130
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTY--GYCAPEYAM 130
++RD + N+LL + K+SDFGL+K LG D S+ + R G + + APE
Sbjct: 131 --FVHRDLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECIN 186
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ + +SDV+S+GV E ++
Sbjct: 187 FRKFSSRSDVWSYGVTMWEALS 208
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 6/92 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE+LH +IYRD K NILL+ H L+DFGL+K V D++ + GT Y
Sbjct: 171 ALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK-EFVADETERAYDFCGTIEY 226
Query: 124 CAPEYAMTGQL--TVKSDVYSFGVVFLELITG 153
AP+ G D +S GV+ EL+TG
Sbjct: 227 MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 28/147 (19%)
Query: 22 QRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLH-----DKANPPV 76
Q L+ + +GSL D+L LD + ++I A GL +LH + P +
Sbjct: 80 QLWLITHYHEMGSLYDYLQ-----LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAI 134
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGP-------VGDKSHVSTRVMGTYGYCAPEYA 129
+RD KS NIL+++ ++D GLA + VG+ V GT Y APE
Sbjct: 135 AHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-----GTKRYMAPEVL 189
Query: 130 -MTGQLTV-----KSDVYSFGVVFLEL 150
T Q+ + D+++FG+V E+
Sbjct: 190 DETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 110 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 161
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 162 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 221
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 222 WSYGIVLWEVMS 233
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 18/151 (11%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL----HDLPPDKEA----LDWNTRMKIAAGAAKG 64
+G C G +++ EF G+L +L ++ P K+ L + + AKG
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKG 156
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRVMGTY 121
+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 157 MEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL--PL 210
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 241
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH +++RD K NIL+ G KL+DFGLA+ + V+ T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALAPVVVTLW 176
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
Y APE + D++S G +F E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+MP G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + K++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH V++RD K NIL+ KL+DFGLA++ T V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSF---QMALTSVVVTLW 184
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGR-------------KAIDSTRPHGEQNLV 169
Y APE + D++S G +F E+ + K +D GE++
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED-- 242
Query: 170 TWARPLFNDRRKF-SKLADP 188
W R + R+ F SK A P
Sbjct: 243 -WPRDVALPRQAFHSKSAQP 261
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+MP G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + K++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---FVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 88 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 147
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+E+L A+ I+RD + NILL E K+ DFGLA+
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 63/140 (45%), Gaps = 23/140 (16%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH V++RD K NIL+ KL+DFGLA+ + T V+ T
Sbjct: 131 RGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLAR---IYSFQMALTSVVVTLW 184
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGR-------------KAIDSTRPHGEQNLV 169
Y APE + D++S G +F E+ + K +D GE++
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED-- 242
Query: 170 TWARPLFNDRRKF-SKLADP 188
W R + R+ F SK A P
Sbjct: 243 -WPRDVALPRQAFHSKSAQP 261
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 61/129 (47%), Gaps = 16/129 (12%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV E+ LGS D L K+ L + GA +GL YLH +I+RD K+
Sbjct: 92 LVMEYC-LGSASDLLE---VHKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAG 144
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT---GQLTVKSDVY 141
NILL E KL DFG A + + +GT + APE + GQ K DV+
Sbjct: 145 NILLSEPGLVKLGDFGSASIMAPANX------FVGTPYWMAPEVILAMDEGQYDGKVDVW 198
Query: 142 SFGVVFLEL 150
S G+ +EL
Sbjct: 199 SLGITCIEL 207
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G +++ EFM GSL+ L + ++ G A G++YL D
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADMN-- 155
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMT 131
++RD + NIL+ K+SDFGL++ T +G + APE
Sbjct: 156 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQY 214
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ T SDV+S+G+V E+++
Sbjct: 215 RKFTSASDVWSYGIVMWEVMS 235
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 72/159 (45%), Gaps = 24/159 (15%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH---------DLPP-------DKE---ALDWNTR 54
+G C G L++ E+ G L + L L P DKE L+
Sbjct: 101 LGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDL 160
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH-V 113
+ ++ A+G+ +L K I+RD + N+LL G K+ DFGLA+ + D ++ V
Sbjct: 161 LHFSSQVAQGMAFLASKN---CIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYIV 216
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE TV+SDV+S+G++ E+ +
Sbjct: 217 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT---YGYCAPEYAMT 131
++RD + N L+ + K+SDFGL++ V D + S+R G+ + PE M
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSSR--GSKFPVRWSPPEVLMY 180
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSD+++FGV+ E+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 88 LGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 147
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+E+L A+ I+RD + NILL E K+ DFGLA+
Sbjct: 148 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 205 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 236
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+E+L A+ I+RD + NILL E K+ DFGLA+
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 67/139 (48%), Gaps = 4/139 (2%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
+GY + G+ R + P G + + P+ E + + + A+G+EYL A+
Sbjct: 120 VGYASKGNLREYLRARRPPGMEYSYDINRVPE-EQMTFKDLVSCTYQLARGMEYL---AS 175
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ 133
I+RD + N+L+ E K++DFGLA+ D +T + APE
Sbjct: 176 QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRV 235
Query: 134 LTVKSDVYSFGVVFLELIT 152
T +SDV+SFGV+ E+ T
Sbjct: 236 YTHQSDVWSFGVLMWEIFT 254
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L LH + VI+R
Sbjct: 143 GDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHR 194
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 195 DIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 252
Query: 140 VYSFGVVFLELITG 153
++S G++ +E++ G
Sbjct: 253 IWSLGIMVIEMVDG 266
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 120 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 171
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 172 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 231
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 232 WSYGIVLWEVMS 243
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHD---LPPD---------KEALDWNTRMKIAAGA 61
+G C L E+ P G+L D L L D L + AA
Sbjct: 89 LGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADV 148
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G++YL K I+R+ + NIL+ E + K++DFGL++ G + +V + MG
Sbjct: 149 ARGMDYLSQKQ---FIHRNLAARNILVGENYVAKIADFGLSR----GQEVYVK-KTMGRL 200
Query: 122 G--YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ A E T SDV+S+GV+ E+++
Sbjct: 201 PVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 73/155 (47%), Gaps = 22/155 (14%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHL---------HDLPPD---KEALDWNTRMKIAAG 60
+G C G +++ EF G+L +L + + P+ K+ L + +
Sbjct: 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQ 156
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D V R+
Sbjct: 157 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDXVRKGDARL 212
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 213 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH +++RD K NIL+ G KL+DFGLA+ + V+ T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALDPVVVTLW 176
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
Y APE + D++S G +F E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPD------------KEALDWNTRMKIAAGA 61
+G C ++ E+ G+L ++L P +E + + +
Sbjct: 107 LGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQL 166
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E +++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 14/150 (9%)
Query: 14 IGYCAD-GDQRLLVYEFMPLGSLEDHLHDL--------PPD--KEALDWNTRMKIAAGAA 62
+G C G +++ EF G+L +L P D K+ L + + A
Sbjct: 99 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVA 158
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KG+E+L A+ I+RD + NILL E K+ DFGLA+
Sbjct: 159 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLK 215
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 216 WMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L LH + VI+R
Sbjct: 100 GDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIHR 151
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 152 DIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 209
Query: 140 VYSFGVVFLELITG 153
++S G++ +E++ G
Sbjct: 210 IWSLGIMVIEMVDG 223
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 45/89 (50%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL++LH +++RD K NIL+ G KL+DFGLA+ + V+ T
Sbjct: 123 RGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLAR---IYSYQMALFPVVVTLW 176
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
Y APE + D++S G +F E+
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMF 205
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L LH + VI+R
Sbjct: 98 GDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQG---VIHR 149
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 150 DIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 207
Query: 140 VYSFGVVFLELITG 153
++S G++ +E++ G
Sbjct: 208 IWSLGIMVIEMVDG 221
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 92/217 (42%), Gaps = 23/217 (10%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G ++V E+M GSL+ L + ++ G + G++YL D
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLR---GISAGMKYLSDMG-- 144
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQ 133
++RD + NIL+ K+SDFGL+++ ++ +TR + APE +
Sbjct: 145 -YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRK 203
Query: 134 LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGR 193
T SDV+S+G+V E+++ RP+ E + + R S + P
Sbjct: 204 FTSASDVWSYGIVMWEVVSY-----GERPYWEMTNQDVIKAVEEGYRLPSPMDCP----- 253
Query: 194 YPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYL 230
LYQ + C Q++ +RP ++V L L
Sbjct: 254 ---AALYQLML---DCWQKERNSRPKFDEIVNMLDKL 284
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 24/174 (13%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEAL--DWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
+LV E G+L+ +L K + W ++ KGL++LH + PP+I+RD
Sbjct: 105 VLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQI------LKGLQFLHTR-TPPIIHRDL 157
Query: 82 KSSNILLE-EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDV 140
K NI + K+ D GLA L ++ + V+GT + APE + DV
Sbjct: 158 KCDNIFITGPTGSVKIGDLGLATL----KRASFAKAVIGTPEFXAPE-XYEEKYDESVDV 212
Query: 141 YSFGVVFLELITGRKAIDSTRPHGE-QNLVTWARPLFNDRR--KFSKLADPRLE 191
Y+FG LE T S P+ E QN R + + + F K+A P ++
Sbjct: 213 YAFGXCXLEXAT------SEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVK 260
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDK-- 71
+G C G L++ E+ G L L+ L L+ + IA A + LH
Sbjct: 116 LGACTHGGPVLVITEYCCYGDL---LNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 72 --------ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--- 120
A+ I+RD + N+LL G K+ DFGLA+ + D +++ V G
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYI---VKGNARL 228
Query: 121 -YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE TV+SDV+S+G++ E+ +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ V + GT
Sbjct: 151 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 204
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 205 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ V + GT
Sbjct: 153 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 206
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 207 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 17/143 (11%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAA---GAAKGLEYLH 69
G G ++V E+M GSL+ L HD T M++ G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTHD--------GQFTIMQLVGMLRGVGAGMRYLS 168
Query: 70 DKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYGYCAPEY 128
D ++RD + N+L++ K+SDFGL++ L D + +T + APE
Sbjct: 169 DLG---YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEA 225
Query: 129 AMTGQLTVKSDVYSFGVVFLELI 151
+ SDV+SFGVV E++
Sbjct: 226 IAFRTFSSASDVWSFGVVMWEVL 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E+M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEYMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL ++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLH----------DLPPDKEALDWNTRMKIAAGAAK 63
+G C G L++ E+ G L + L L + ++ A+
Sbjct: 116 LGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQ 175
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT--- 120
G+ +L A+ I+RD + N+LL G K+ DFGLA+ + D +++ V G
Sbjct: 176 GMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLAR-DIMNDSNYI---VKGNARL 228
Query: 121 -YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE TV+SDV+S+G++ E+ +
Sbjct: 229 PVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L LH + VI+R
Sbjct: 89 GDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHR 140
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 141 DIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 198
Query: 140 VYSFGVVFLELITG 153
++S G++ +E++ G
Sbjct: 199 IWSLGIMVIEMVDG 212
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 89/225 (39%), Gaps = 29/225 (12%)
Query: 17 CADGDQRLLVYEFMPLGSLEDH--LHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
C + LV+EF+ DH L DL LD+ K G+ + H
Sbjct: 93 CKKKKRWYLVFEFV------DHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHN-- 144
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+I+RD K NIL+ + KL DFG A+ + V + T Y APE + G +
Sbjct: 145 -IIHRDIKPENILVSQSGVVKLCDFGFAR--TLAAPGEVYDDEVATRWYRAPE-LLVGDV 200
Query: 135 TV--KSDVYSFGVVFLELITGRKAI--DSTRPHGEQ------NLVTWARPLFNDRRKFSK 184
DV++ G + E+ G DS NL+ + LFN F+
Sbjct: 201 KYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAG 260
Query: 185 LADPRLEGRYPIRGLYQALA-----VASMCIQEQAATRPLIGDVV 224
+ P ++ R P+ Y L+ +A C+ RP +++
Sbjct: 261 VRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ LV+E M GS+ H+H + + + A L++LH+K + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNKG---IAHRD 136
Query: 81 FKSSNILLEEGFHP------KLSDFGLAK-LGPVGDKSHVSTRVM----GTYGYCAPEY- 128
K NIL E HP K+ DFGL + GD S +ST + G+ Y APE
Sbjct: 137 LKPENILCE---HPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 129 -AMTGQLTV---KSDVYSFGVVFLELITG 153
A + + ++ + D++S GV+ L++G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 10/134 (7%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
GD+ +V EF+ G+L D + ++E + + + L LH + VI+R
Sbjct: 93 GDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCLAVLQALSVLHAQG---VIHR 144
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
D KS +ILL KLSDFG V + ++GT + APE + D
Sbjct: 145 DIKSDSILLTHDGRVKLSDFGFC--AQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVD 202
Query: 140 VYSFGVVFLELITG 153
++S G++ +E++ G
Sbjct: 203 IWSLGIMVIEMVDG 216
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTY 121
A+G+EYL A+ I+RD + N+L+ E K++DFGLA+ D +T
Sbjct: 167 ARGMEYL---ASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPV 223
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+SFGV+ E+ T
Sbjct: 224 KWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
++RD + N L+ + K+SDFGL++ + D+ S + PE M +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEETSSVGSKFPVRWSPPEVLMYSKF 198
Query: 135 TVKSDVYSFGVVFLELIT 152
+ KSD+++FGV+ E+ +
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 28 EFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNIL 87
EF G+LE + +K LD +++ KG++Y+H K +I RD K SNI
Sbjct: 100 EFCDKGTLEQWIEKRRGEK--LDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIF 154
Query: 88 LEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVV 146
L + K+ DFGL L G + R GT Y +PE + + D+Y+ G++
Sbjct: 155 LVDTKQVKIGDFGLVTSLKNDGKRX----RSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210
Query: 147 FLELI 151
EL+
Sbjct: 211 LAELL 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ V + GT
Sbjct: 127 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV---LCGTPN 180
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 181 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
+EY H +++RD K N+LL++ + K++DFGL+ + G+ S G+ Y
Sbjct: 120 AIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 173
Query: 124 CAPEYAMTGQLTV--KSDVYSFGVVFLELITGRKAID 158
APE + G+L + DV+S G+V ++ GR D
Sbjct: 174 AAPE-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 93 MIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 144
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 145 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 204
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 205 WSYGIVLWEVMS 216
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN 73
IG C + +LV E G L L +E + + ++ + G++YL +K
Sbjct: 402 IGVC-QAEALMLVMEMAGGGPLHKFLVG---KREEIPVSNVAELLHQVSMGMKYLEEKN- 456
Query: 74 PPVIYRDFKSSNILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTY--GYCAPEYAM 130
++R+ + N+LL + K+SDFGL+K LG D S+ + R G + + APE
Sbjct: 457 --FVHRNLAARNVLLVNRHYAKISDFGLSKALG--ADDSYYTARSAGKWPLKWYAPECIN 512
Query: 131 TGQLTVKSDVYSFGVVFLELIT 152
+ + +SDV+S+GV E ++
Sbjct: 513 FRKFSSRSDVWSYGVTMWEALS 534
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 53/101 (52%), Gaps = 13/101 (12%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEY---AMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE AM TV D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNAMHYNQTV--DIWSVGCIMAELLTGRTLFPGT 226
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAA-GAAKGLEYLHDKANPPVIYRDFKS 83
LV+EFM +D L +K L ++++KI +G+ + H +++RD K
Sbjct: 96 LVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKP 147
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM-TGQLTVKSDVYS 142
N+L+ KL+DFGLA+ + +S+ T + T Y AP+ M + + + D++S
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 143 FGVVFLELITGR 154
G +F E+ITG+
Sbjct: 206 IGCIFAEMITGK 217
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 11/141 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
G ++V E M GSL+ L HD L + + G A G++YL D
Sbjct: 113 GVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG 167
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMT 131
++RD + NIL+ K+SDFGL+++ ++ +TR + +PE
Sbjct: 168 ---AVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAY 224
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ T SDV+S+G+V E+++
Sbjct: 225 RKFTSASDVWSYGIVLWEVMS 245
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + K++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 165 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 216
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + D++S G + EL+TGR T
Sbjct: 217 YRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 12/132 (9%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAA-GAAKGLEYLHDKANPPVIYRDFKS 83
LV+EFM +D L +K L ++++KI +G+ + H +++RD K
Sbjct: 96 LVFEFME----KDLKKVLDENKTGLQ-DSQIKIYLYQLLRGVAHCHQHR---ILHRDLKP 147
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM-TGQLTVKSDVYS 142
N+L+ KL+DFGLA+ + +S+ T + T Y AP+ M + + + D++S
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSY--THEVVTLWYRAPDVLMGSKKYSTSVDIWS 205
Query: 143 FGVVFLELITGR 154
G +F E+ITG+
Sbjct: 206 IGCIFAEMITGK 217
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTY 121
+G++YLH N VI+RD K N+ L + K+ DFGLA K+ G++ + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT---LCGTP 206
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + D++S G + L+ G+ +++
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK------------LGPVGDK 110
+ L Y+H + +I+RD K NI ++E + K+ DFGLAK +
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 111 SHVSTRVMGTYGYCAPEYA-MTGQLTVKSDVYSFGVVFLELI 151
S T +GT Y A E TG K D+YS G++F E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFGLAK V R + GT Y APE ++
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 49/102 (48%), Gaps = 16/102 (15%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK------------LGPVGDK 110
+ L Y+H + +I+RD K NI ++E + K+ DFGLAK +
Sbjct: 127 EALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 111 SHVSTRVMGTYGYCAPEYA-MTGQLTVKSDVYSFGVVFLELI 151
S T +GT Y A E TG K D+YS G++F E+I
Sbjct: 184 SDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTY 121
+G++YLH N VI+RD K N+ L + K+ DFGLA K+ G++ + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKXLCGTP 206
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + D++S G + L+ G+ +++
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 19/146 (13%)
Query: 16 YCADGDQRLL--VYEFMPLGSLEDHLHDL-PPDKEALDWNTRMKIAAGAAKGLEYLHDKA 72
+CA D + L V E+MP G L + + + P+K A + + +A A + +H
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIH--- 197
Query: 73 NPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
RD K N+LL++ H KL+DFG K+ G H T V GT Y +PE +
Sbjct: 198 ------RDVKPDNMLLDKHGHLKLADFGTCMKMDETG-MVHCDTAV-GTPDYISPEVLKS 249
Query: 132 ----GQLTVKSDVYSFGVVFLELITG 153
G + D +S GV E++ G
Sbjct: 250 QGGDGYYGRECDWWSVGVFLFEMLVG 275
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATR-----W 194
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 86 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 140
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
++RD + N L+ + K+SDFGL++ + D+ S + PE M +
Sbjct: 141 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKF 198
Query: 135 TVKSDVYSFGVVFLELIT 152
+ KSD+++FGV+ E+ +
Sbjct: 199 SSKSDIWAFGVLMWEIYS 216
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDF 81
++V E M GSL+ L HD L + + G A G++YL D ++RD
Sbjct: 122 MIVTEXMENGSLDSFLRKHDAQFTVIQL-----VGMLRGIASGMKYLSDMG---YVHRDL 173
Query: 82 KSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDV 140
+ NIL+ K+SDFGL+++ ++ +TR + +PE + T SDV
Sbjct: 174 AARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDV 233
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 234 WSYGIVLWEVMS 245
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 70 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 124
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT---YGYCAPEYAMT 131
++RD + N L+ + K+SDFGL++ V D + S+ +G+ + PE M
Sbjct: 125 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMY 179
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSD+++FGV+ E+ +
Sbjct: 180 SKFSSKSDIWAFGVLMWEIYS 200
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+++ E+M GSL+ L + ++ G G++YL D + ++RD +
Sbjct: 106 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDMS---AVHRDLAA 159
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYS 142
NIL+ K+SDFG++++ ++ +TR + APE + T SDV+S
Sbjct: 160 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 219
Query: 143 FGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRGLYQA 202
+G+V E+++ RP+ + + + + + +L P PI L+Q
Sbjct: 220 YGIVMWEVMSY-----GERPYWDMS----NQDVIKAIEEGYRLPPPM---DCPI-ALHQL 266
Query: 203 LAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHRGAGDK 246
+ C Q++ + RP G +V L L +PNS + G +
Sbjct: 267 ML---DCWQKERSDRPKFGQIVNMLDKLIR---NPNSLKRTGSE 304
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 13/140 (9%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D + +V + + G L HL KE T L+YL N +I+
Sbjct: 86 DEEDMFMVVDLLLGGDLRYHLQQNVHFKEE----TVKLFICELVMALDYLQ---NQRIIH 138
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ---LT 135
RD K NILL+E H ++DF +A + P + T + GT Y APE + + +
Sbjct: 139 RDMKPDNILLDEHGHVHITDFNIAAMLP---RETQITTMAGTKPYMAPEMFSSRKGAGYS 195
Query: 136 VKSDVYSFGVVFLELITGRK 155
D +S GV EL+ GR+
Sbjct: 196 FAVDWWSLGVTAYELLRGRR 215
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + K++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIKVADFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 7/101 (6%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMG 119
+G++YLH N VI+RD K N+ L + K+ DFGLA K+ G++ + G
Sbjct: 135 TIQGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCG 188
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
T Y APE + + D++S G + L+ G+ +++
Sbjct: 189 TPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 66 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 120
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT---YGYCAPEYAMT 131
++RD + N L+ + K+SDFGL++ V D + S+ +G+ + PE M
Sbjct: 121 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMY 175
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSD+++FGV+ E+ +
Sbjct: 176 SKFSSKSDIWAFGVLMWEIYS 196
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 146 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 197
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 198 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 10/114 (8%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEG--FHP-KLSDFGLAKLGPVGDKSHVSTRVMGT 120
L Y H + V+++D K NIL ++ P K+ DFGLA+L + S T GT
Sbjct: 136 ALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHS---TNAAGT 189
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWARP 174
Y APE +T K D++S GVV L+TG T Q T+ P
Sbjct: 190 ALYMAPE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEP 242
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+V E++ G L D++ LD ++ G++Y H V++RD K
Sbjct: 92 FMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRHM---VVHRDLKP 144
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTV--KSDVY 141
N+LL+ + K++DFGL+ + G+ S G+ Y APE ++G+L + D++
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMSDGEFLRXSC---GSPNYAAPE-VISGRLYAGPEVDIW 200
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L+ G D
Sbjct: 201 SSGVILYALLCGTLPFD 217
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 13/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 71 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 125
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT---YGYCAPEYAMT 131
++RD + N L+ + K+SDFGL++ V D + S+ +G+ + PE M
Sbjct: 126 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY--VLDDEYTSS--VGSKFPVRWSPPEVLMY 180
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSD+++FGV+ E+ +
Sbjct: 181 SKFSSKSDIWAFGVLMWEIYS 201
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 7/99 (7%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTY 121
+G++YLH N VI+RD K N+ L + K+ DFGLA K+ G++ + GT
Sbjct: 153 QGVQYLH---NNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER---KKDLCGTP 206
Query: 122 GYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + D++S G + L+ G+ +++
Sbjct: 207 NYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 135 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 186
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 187 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 147 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 198
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 199 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 143 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 194
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 207 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 262
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 263 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 295
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 207
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 209 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 264
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 265 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 297
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C ++ E+M G L ++L ++ + +++ + +EYL K
Sbjct: 77 GVCTKQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLESKQ-- 131
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
++RD + N L+ + K+SDFGL++ + D+ S + PE M +
Sbjct: 132 -FLHRDLAARNCLVNDQGVVKVSDFGLSRY-VLDDEYTSSVGSKFPVRWSPPEVLMYSKF 189
Query: 135 TVKSDVYSFGVVFLELIT 152
+ KSD+++FGV+ E+ +
Sbjct: 190 SSKSDIWAFGVLMWEIYS 207
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+++ E+M GSL+ L + ++ G G++YL D + ++RD +
Sbjct: 91 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDMS---YVHRDLAA 144
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYS 142
NIL+ K+SDFG++++ ++ +TR + APE + T SDV+S
Sbjct: 145 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 204
Query: 143 FGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRGLYQA 202
+G+V E+++ RP+ + + + + + +L P PI L+Q
Sbjct: 205 YGIVMWEVMSY-----GERPYWDMS----NQDVIKAIEEGYRLPPPM---DCPI-ALHQL 251
Query: 203 LAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHRGAGDK 246
+ C Q++ + RP G +V L L +PNS + G +
Sbjct: 252 MLD---CWQKERSDRPKFGQIVNMLDKLIR---NPNSLKRTGSE 289
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 155 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 206
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 207 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 148 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 199
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 200 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 210
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 200 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 255
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 256 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 288
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 141 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 192
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 193 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 159 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATR-----W 210
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 211 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 134 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 185
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 183
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN--PPVIYRDFK 82
+V E+ G L + +++ LD +++ L+ H +++ V++RD K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYS 142
+N+ L+ + KL DFGLA++ + + + +GT Y +PE KSD++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI--LNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 143 FGVVFLEL 150
G + EL
Sbjct: 202 LGCLLYEL 209
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 133 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR-----W 184
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 185 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHV---STRV 117
AKG+E+L A+ I+RD + NILL E K+ DFGLA+ D +V R+
Sbjct: 202 VAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLAR-DIYKDPDYVRKGDARL 257
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T++SDV+SFGV+ E+ +
Sbjct: 258 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 290
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ + GT
Sbjct: 133 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPN 186
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 187 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 133 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 185
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 9/132 (6%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+++ EFM GSL+ L + ++ G A G++YL D ++R +
Sbjct: 84 MIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GIAAGMKYLADMN---YVHRALAA 137
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMTGQLTVKSDV 140
NIL+ K+SDFGL++ T +G + APE + T SDV
Sbjct: 138 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 197
Query: 141 YSFGVVFLELIT 152
+S+G+V E+++
Sbjct: 198 WSYGIVMWEVMS 209
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 58 AAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRV 117
AA A L YLH ++YRD K NILL+ H L+DFGL K + S ST
Sbjct: 145 AAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKEN-IEHNSTTST-F 199
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT Y APE D + G V E++ G
Sbjct: 200 CGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYG 235
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+++ E+M GSL+ L + ++ G G++YL D + ++RD +
Sbjct: 85 MIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GIGSGMKYLSDMS---YVHRDLAA 138
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYS 142
NIL+ K+SDFG++++ ++ +TR + APE + T SDV+S
Sbjct: 139 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWS 198
Query: 143 FGVVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRGLYQA 202
+G+V E+++ RP+ + + + + + +L P PI L+Q
Sbjct: 199 YGIVMWEVMSY-----GERPYWDMS----NQDVIKAIEEGYRLPPPM---DCPI-ALHQL 245
Query: 203 LAVASMCIQEQAATRPLIGDVVTALSYLANQTYDPNSHRGAGDK 246
+ C Q++ + RP G +V L L +PNS + G +
Sbjct: 246 MLD---CWQKERSDRPKFGQIVNMLDKLIR---NPNSLKRTGSE 283
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ + GT
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPN 182
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 142 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ +V+TR
Sbjct: 138 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR-----W 189
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 190 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWTLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNIL---LEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLHD +++RD K N+L L+E +SDFGL+K+ D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGT 181
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GY APE + D +S GV+ L+ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + + G+ YLH K + + D K
Sbjct: 84 VLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKP 136
Query: 84 SNILLEEGFHP----KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + P KL DFG+A G++ + GT + APE L +++D
Sbjct: 137 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEAD 193
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 194 MWSIGVITYILLSG 207
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 62/128 (48%), Gaps = 4/128 (3%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN--PPVIYRDFK 82
+V E+ G L + +++ LD +++ L+ H +++ V++RD K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYS 142
+N+ L+ + KL DFGLA++ + + + +GT Y +PE KSD++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI--LNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 143 FGVVFLEL 150
G + EL
Sbjct: 202 LGCLLYEL 209
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 7/98 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYG 122
G +YLH VI+RD K N+ L E K+ DFGLA K+ G++ + GT
Sbjct: 129 GCQYLHRNR---VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT---LCGTPN 182
Query: 123 YCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + + DV+S G + L+ G+ +++
Sbjct: 183 YIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 157
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 105 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 157
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 158 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 209
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 210 KAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++P G + HL + E + R AA EYLH + +IY
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 150
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
RD K N+L+++ + +++DFG AK K T + GT Y APE ++
Sbjct: 151 RDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWT-LCGTPEYLAPEIILSKGYNKAV 205
Query: 139 DVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 206 DWWALGVLIYEMAAGYPPFFADQP 229
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNIL---LEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLHD +++RD K N+L L+E +SDFGL+K+ D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGT 181
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GY APE + D +S GV+ L+ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNIL---LEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLHD +++RD K N+L L+E +SDFGL+K+ D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGT 181
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GY APE + D +S GV+ L+ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + +++DFGLAK V R + GT Y APE ++
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGLAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + + G+ YLH K + + D K
Sbjct: 105 VLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKP 157
Query: 84 SNILLEEGFHP----KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + P KL DFG+A G++ + GT + APE L +++D
Sbjct: 158 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEAD 214
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 215 MWSIGVITYILLSG 228
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + K++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLMIDQQGYIKVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 61/128 (47%), Gaps = 4/128 (3%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKAN--PPVIYRDFK 82
+V E+ G L + +++ LD +++ L+ H +++ V++RD K
Sbjct: 84 IVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLK 143
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYS 142
+N+ L+ + KL DFGLA++ + + +GT Y +PE KSD++S
Sbjct: 144 PANVFLDGKQNVKLGDFGLARI--LNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 143 FGVVFLEL 150
G + EL
Sbjct: 202 LGCLLYEL 209
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNIL---LEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLHD +++RD K N+L L+E +SDFGL+K+ D V + GT
Sbjct: 128 AVKYLHDLG---IVHRDLKPENLLYYSLDEDSKIMISDFGLSKME---DPGSVLSTACGT 181
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GY APE + D +S GV+ L+ G
Sbjct: 182 PGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G + +++ EFM G+L+ L + ++ G A G+ YL + +
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMS-- 138
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMT 131
++RD + NIL+ K+SDFGL++ T +G + APE
Sbjct: 139 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAF 197
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ T SD +S+G+V E+++
Sbjct: 198 RKFTSASDAWSYGIVMWEVMS 218
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 66/140 (47%), Gaps = 9/140 (6%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
++ +V E+ P G L D++ + D+ + + TR+ + + Y+H + +R
Sbjct: 80 ANKIFMVLEYCPGGELFDYI--ISQDRLS-EEETRV-VFRQIVSAVAYVHSQGYA---HR 132
Query: 80 DFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM-TGQLTVKS 138
D K N+L +E KL DFGL P G+K + G+ Y APE L ++
Sbjct: 133 DLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEA 191
Query: 139 DVYSFGVVFLELITGRKAID 158
DV+S G++ L+ G D
Sbjct: 192 DVWSMGILLYVLMCGFLPFD 211
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + + G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AEKESLTEDEATQFLKQILDGVHYLHSKR---IAHFDLKP 143
Query: 84 SNILLEEGFHP----KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + P KL DFG+A G++ + GT + APE L +++D
Sbjct: 144 ENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF---KNIFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 6/90 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GLEYLH +++RD K +N+LL+E KL+DFGLAK G + + T
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAK--SFGSPNRAYXHQVVTRW 177
Query: 123 YCAPEYAMTGQLT-VKSDVYSFGVVFLELI 151
Y APE ++ V D+++ G + EL+
Sbjct: 178 YRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ V+TR
Sbjct: 156 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATR-----W 207
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 208 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ V+TR
Sbjct: 132 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR-----W 183
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 184 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGLA+ V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL Y+H +I+RD K N+ + E K+ DFGLA+ V TR
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTR-----W 190
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE + + T D++S G + E+ITG+
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ D+GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%), Gaps = 26/149 (17%)
Query: 21 DQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD 80
D+ LV+E M GS+ H+H + + + A L++LH+K + +RD
Sbjct: 84 DRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNKG---IAHRD 136
Query: 81 FKSSNILLEEGFHP------KLSDFGLAK-LGPVGDKSHVSTRVM----GTYGYCAPEY- 128
K NIL E HP K+ DF L + GD S +ST + G+ Y APE
Sbjct: 137 LKPENILCE---HPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVV 193
Query: 129 -AMTGQLTV---KSDVYSFGVVFLELITG 153
A + + ++ + D++S GV+ L++G
Sbjct: 194 EAFSEEASIYDKRCDLWSLGVILYILLSG 222
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 68/156 (43%), Gaps = 25/156 (16%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEG 91
L ED L P++ A + M IA + L Y+H RD K NIL++
Sbjct: 165 LSKFEDRL----PEEMARFYLAEMVIAIDSVHQLHYVH---------RDIKPDNILMDMN 211
Query: 92 FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT-----GQLTVKSDVYSFGVV 146
H +L+DFG + L + D + S+ +GT Y +PE G+ + D +S GV
Sbjct: 212 GHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVC 270
Query: 147 FLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKF 182
E++ G P ++LV + N + +F
Sbjct: 271 MYEMLYGET------PFYAESLVETYGKIMNHKERF 300
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 63/141 (44%), Gaps = 9/141 (6%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G + +++ EFM G+L+ L + ++ G A G+ YL + +
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLR---GIASGMRYLAEMS-- 136
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG---TYGYCAPEYAMT 131
++RD + NIL+ K+SDFGL++ T +G + APE
Sbjct: 137 -YVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAF 195
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ T SD +S+G+V E+++
Sbjct: 196 RKFTSASDAWSYGIVMWEVMS 216
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DFGL + +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+ +L K I+RD + NILL G K+ DFGLA+ V
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+S+G+ EL +
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
+EY H +++RD K N+LL+E + K++DFGL+ + G+ S G+ Y
Sbjct: 125 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 178
Query: 124 CAPEYAMTGQLTV--KSDVYSFGVVFLELITGRKAID 158
APE ++G+L + DV+S GV+ ++ R D
Sbjct: 179 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 42 LPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLS 97
LP E + N +++ +G+ YLH +++ D K NILL +P K+
Sbjct: 121 LPELAEMVSENDVIRLIKQILEGVYYLHQNN---IVHLDLKPQNILLS-SIYPLGDIKIV 176
Query: 98 DFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
DFG+++ +G + +MGT Y APE +T +D+++ G++ L+T
Sbjct: 177 DFGMSR--KIGHACELR-EIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLT 228
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
+EY H +++RD K N+LL+E + K++DFGL+ + G+ S G+ Y
Sbjct: 124 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 177
Query: 124 CAPEYAMTGQLTV--KSDVYSFGVVFLELITGRKAID 158
APE ++G+L + DV+S GV+ ++ R D
Sbjct: 178 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
+EY H +++RD K N+LL+E + K++DFGL+ + G+ S G+ Y
Sbjct: 115 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 168
Query: 124 CAPEYAMTGQLTV--KSDVYSFGVVFLELITGRKAID 158
APE ++G+L + DV+S GV+ ++ R D
Sbjct: 169 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E+ P G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLMIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+ +L K I+RD + NILL G K+ DFGLA+ V
Sbjct: 170 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+S+G+ EL +
Sbjct: 227 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 258
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
+EY H +++RD K N+LL+E + K++DFGL+ + G+ S G+ Y
Sbjct: 119 AVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSC---GSPNY 172
Query: 124 CAPEYAMTGQLTV--KSDVYSFGVVFLELITGRKAID 158
APE ++G+L + DV+S GV+ ++ R D
Sbjct: 173 AAPE-VISGKLYAGPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLE-EGFHPKLSDFGLA-KLGPVGDKSHVST--R 116
A +GLEYLH + +++ D K+ N+LL +G H L DFG A L P G + T
Sbjct: 194 ALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ GT + APE + K DV+S + L ++ G
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 287
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ Y HD+ V++RD K N+L+ K++DFGLA+ + + + T + T Y
Sbjct: 112 GIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEIVTLWY 166
Query: 124 CAPEYAM-TGQLTVKSDVYSFGVVFLELITG 153
AP+ M + + + D++S G +F E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H+ +++RD K N+L+ + KL DFGLA+ + + S V T
Sbjct: 119 QGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV--TLW 173
Query: 123 YCAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDSTRPHGEQNLV-----TWARPLF 176
Y AP+ M + S D++S G + E+ITG+ T + L+ T L+
Sbjct: 174 YRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLW 233
Query: 177 NDRRKFSKLADPRLEGRYPIRGLYQAL 203
K K +P ++ R P R L Q L
Sbjct: 234 PSVTKLPK-YNPNIQQR-PPRDLRQVL 258
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL+Y+H V++RD K N+ + E K+ DFGLA+ +V TR
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 206
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE ++ D++S G + E++TG+
Sbjct: 207 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL Y H + V++RD K N+L+ E KL+DFGLA+ + K++ + V T
Sbjct: 111 RGLAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV--TLW 165
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELITGR 154
Y P+ + + + + D++ G +F E+ TGR
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ Y HD+ V++RD K N+L+ K++DFGLA+ + + + T + T Y
Sbjct: 112 GIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWY 166
Query: 124 CAPEYAM-TGQLTVKSDVYSFGVVFLELITG 153
AP+ M + + + D++S G +F E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 91 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKY---IVHRDLK 141
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + VG+K G+ Y APE + + DV+
Sbjct: 142 AENLLLDGDMNIKIADFGFSNEFTVGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 198
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 199 SLGVILYTLVSGSLPFD 215
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL+Y+H V++RD K N+ + E K+ DFGLA+ +V TR
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTR-----W 188
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE ++ D++S G + E++TG+
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+ +L K I+RD + NILL G K+ DFGLA+ V
Sbjct: 154 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+S+G+ EL +
Sbjct: 211 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 242
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 7/97 (7%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLE-EGFHPKLSDFGLAK-LGPVGDKSHVST--R 116
A +GLEYLH + +++ D K+ N+LL +G H L DFG A L P G + T
Sbjct: 175 ALEGLEYLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 117 VMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ GT + APE + K DV+S + L ++ G
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNG 268
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 46 KEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG 105
KE + + + A+G+E+L + I+RD + NILL E K+ DFGLA+
Sbjct: 193 KEPITMEDLISYSFQVARGMEFLSSRK---CIHRDLAARNILLSENNVVKICDFGLAR-D 248
Query: 106 PVGDKSHV---STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ +V TR+ + APE + KSDV+S+GV+ E+ +
Sbjct: 249 IYKNPDYVRKGDTRL--PLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS 296
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+ +L K I+RD + NILL G K+ DFGLA+ V
Sbjct: 172 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+S+G+ EL +
Sbjct: 229 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 260
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+ Y HD+ V++RD K N+L+ K++DFGLA+ + + + T + T Y
Sbjct: 112 GIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKY--THEVVTLWY 166
Query: 124 CAPEYAM-TGQLTVKSDVYSFGVVFLELITG 153
AP+ M + + + D++S G +F E++ G
Sbjct: 167 RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
LV++ M G L D+L +K L KI + + LH K N +++RD K
Sbjct: 100 FLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALH-KLN--IVHRDLKP 152
Query: 84 SNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ------LTV 136
NILL++ + KL+DFG + +L P G+K V GT Y APE
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGK 208
Query: 137 KSDVYSFGVVFLELITG 153
+ D++S GV+ L+ G
Sbjct: 209 EVDMWSTGVIMYTLLAG 225
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 43/92 (46%), Gaps = 3/92 (3%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
AKG+ +L K I+RD + NILL G K+ DFGLA+ V
Sbjct: 177 VAKGMAFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
+ APE T +SDV+S+G+ EL +
Sbjct: 234 VKWMAPESIFNCVYTFESDVWSYGIFLWELFS 265
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
LV++ M G L D+L +K L KI + + LH K N +++RD K
Sbjct: 87 FLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALH-KLN--IVHRDLKP 139
Query: 84 SNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ------LTV 136
NILL++ + KL+DFG + +L P G+K V GT Y APE
Sbjct: 140 ENILLDDDMNIKLTDFGFSCQLDP-GEKLR---EVCGTPSYLAPEIIECSMNDNHPGYGK 195
Query: 137 KSDVYSFGVVFLELITG 153
+ D++S GV+ L+ G
Sbjct: 196 EVDMWSTGVIMYTLLAG 212
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H +I+RD K SN+ + E ++ DFGLA+ +V+TR
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATR-----W 185
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE + D++S G + EL+ G+
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 65/137 (47%), Gaps = 18/137 (13%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
LV++ M G L D+L +K L KI + + LH K N +++RD K
Sbjct: 100 FLVFDLMKKGELFDYL----TEKVTLSEKETRKIMRALLEVICALH-KLN--IVHRDLKP 152
Query: 84 SNILLEEGFHPKLSDFGLA-KLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQ------LTV 136
NILL++ + KL+DFG + +L P G+K V GT Y APE
Sbjct: 153 ENILLDDDMNIKLTDFGFSCQLDP-GEKLR---SVCGTPSYLAPEIIECSMNDNHPGYGK 208
Query: 137 KSDVYSFGVVFLELITG 153
+ D++S GV+ L+ G
Sbjct: 209 EVDMWSTGVIMYTLLAG 225
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 151
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L++E + +++DFG AK V R + GT Y APE ++
Sbjct: 152 RDLKPENLLIDEQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 203
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 204 KAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK------------LGPVGDK 110
+ L Y+H + +I+R+ K NI ++E + K+ DFGLAK +
Sbjct: 127 EALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
Query: 111 SHVSTRVMGTYGYCAPEYA-MTGQLTVKSDVYSFGVVFLELI 151
S T +GT Y A E TG K D YS G++F E I
Sbjct: 184 SDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 60/132 (45%), Gaps = 14/132 (10%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
LV EF G L + + ++ D I G+ YLH K N +++RD K
Sbjct: 123 LVTEFYEGGELFEQI----INRHKFDECDAANIMKQILSGICYLH-KHN--IVHRDIKPE 175
Query: 85 NILLEEG---FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
NILLE + K+ DFGL+ K + +GT Y APE + + K DV+
Sbjct: 176 NILLENKNSLLNIKIVDFGLSSFFS---KDYKLRDRLGTAYYIAPE-VLKKKYNEKCDVW 231
Query: 142 SFGVVFLELITG 153
S GV+ L+ G
Sbjct: 232 SCGVIMYILLCG 243
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 126 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 185
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 186 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 242
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 243 AFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 160 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 160 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 106 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 165
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 166 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 222
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 223 AFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 19/194 (9%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
+V E G L + K + T K LE++H + V++RD K +
Sbjct: 109 IVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRR---VMHRDIKPA 165
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+ + KL D GL + K+ + ++GT Y +PE KSD++S G
Sbjct: 166 NVFITATGVVKLGDLGLGRF--FSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLG 223
Query: 145 VVFLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKFSKLADPRLEGRYPIRGLYQALA 204
+ E+ A+ S + NL + +K + P L + L Q
Sbjct: 224 CLLYEM----AALQSPFYGDKMNLYSLC-------KKIEQCDYPPLPSDHYSEELRQ--- 269
Query: 205 VASMCIQEQAATRP 218
+ +MCI RP
Sbjct: 270 LVNMCINPDPEKRP 283
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 10/146 (6%)
Query: 14 IGYCADGDQR-----LLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLE 66
+G C + + +++ FM G L +L L + + T +K A G+E
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 67 YLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAP 126
YL +N ++RD + N +L + ++DFGL+K GD + A
Sbjct: 162 YL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 127 EYAMTGQLTVKSDVYSFGVVFLELIT 152
E T KSDV++FGV E+ T
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H +I+RD K SN+ + E ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE + D++S G + EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 99 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 159 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S GV+ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 91 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 150
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 151 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 207
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 208 AFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 99 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 158
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 159 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 215
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 216 AFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 116 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 175
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 176 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 232
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 233 AFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H +I+RD K SN+ + E ++ DFGLA+ +V+TR
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATR-----W 193
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGR 154
Y APE + D++S G + EL+ G+
Sbjct: 194 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 12/144 (8%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 185
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKS 138
RD K N+L+++ + +++DFG AK + + GT Y APE ++
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAK-----RVKGATWTLCGTPEYLAPEIILSKGYNKAV 240
Query: 139 DVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 241 DWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 174 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 114 IGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 174 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 100 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 159
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 160 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE 216
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 217 AFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ DF LA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 114 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 173
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 174 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE 230
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 231 AFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S GV+ E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ FGLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLXGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 117 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 176
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 177 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 233
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 234 AFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 113 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 165
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 166 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 217
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 218 KAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPAFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKL---------GPVGDKSHVSTRVMGTYGYCAP 126
VI+RD K SN+L+ K+ DFGLA++ P G +S + T + T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXVATRWYRAP 191
Query: 127 EYAMT-GQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTW 171
E +T + + DV+S G + EL R+ I R + Q L+ +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIF 236
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLAGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 172
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPP 259
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 114 QGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT 135
V++RD K N+LL+ + K++DFGL+ + G+ S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSC---GSPNYAAPE-VISGRLY 187
Query: 136 V--KSDVYSFGVVFLELITGRKAID 158
+ D++S GV+ L+ G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 133 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 185
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 186 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 237
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 238 KAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 12/106 (11%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKL---------GPVGDKSHVSTRVMGTYGYCAP 126
VI+RD K SN+L+ K+ DFGLA++ P G +S + T + T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYVATRWYRAP 191
Query: 127 EYAMT-GQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTW 171
E +T + + DV+S G + EL R+ I R + Q L+ +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIF 236
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H K N +++RD K NILL E+ K+ DFGL+ K
Sbjct: 125 RIIKQVFSGITYMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ R+ GT Y APE + G K DV+S GV+ L++G
Sbjct: 180 MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 107 DNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQIVLTFEYLH---SLDLIY 159
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 160 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 211
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 212 KAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 121 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 175
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 176 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPP 262
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 168
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 169
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C GD+ +LV EF+ GSL+ +L +K ++ ++++A A + +L +
Sbjct: 79 GVCVCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAAAMHFLEENT-- 133
Query: 75 PVIYRDFKSSNILL------EEGFHP--KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAP 126
+I+ + + NILL + G P KLSD G++ V K + R+ + P
Sbjct: 134 -LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----PWVPP 186
Query: 127 EYAMTGQ-LTVKSDVYSFGVVFLELITG----RKAIDSTR 161
E + L + +D +SFG E+ +G A+DS R
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR 226
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 14 IGYCADGDQRLLVYEFMPLGSLEDHLHDL---PPDKEALDWNTRMKIAAGAAKGLEYLHD 70
IG R ++ E M G L+ L + P +L + +A A G +YL +
Sbjct: 140 IGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEE 199
Query: 71 KANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPE 127
I+RD + N LL G K+ DFG+A+ M + PE
Sbjct: 200 NH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE 256
Query: 128 YAMTGQLTVKSDVYSFGVVFLELIT 152
M G T K+D +SFGV+ E+ +
Sbjct: 257 AFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 168
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G+ Y APE + + DV+
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNK---LDEFCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 67/147 (45%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ T + T
Sbjct: 121 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY--THEVVTLW 175
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 176 YRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 235
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 236 PGVTSMPDYKPSFPKWARQDFSKVVPP 262
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G+ Y APE + + DV+
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 83 LVMEYASGGEVFDYLVAHGWMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 133
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G+ Y APE + + DV+
Sbjct: 134 AENLLLDADMNIKIADFGFSNEFTFGNKLDTFC---GSPPYAAPELFQGKKYDGPEVDVW 190
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 191 SLGVILYTLVSGSLPFD 207
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G+ Y APE + + DV+
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G+ Y APE + + DV+
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
L+ E+ G + D+L H +KEA ++ + A ++Y H K +++RD K
Sbjct: 88 LIMEYASGGEVFDYLVAHGRMKEKEA---RSKFRQIVSA---VQYCHQKR---IVHRDLK 138
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + VG K G+ Y APE + + DV+
Sbjct: 139 AENLLLDADMNIKIADFGFSNEFTVGGKLDT---FCGSPPYAAPELFQGKKYDGPEVDVW 195
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 196 SLGVILYTLVSGSLPFD 212
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALD--WNTRMKIAAGAAKGLEYLHDKANPPV 76
D + +V E M G L D + KEA + +M +A ++YLH+ +
Sbjct: 84 DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYLHENG---I 134
Query: 77 IYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT Y APE +
Sbjct: 135 IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVG 191
Query: 131 TGQLTVKSDVYSFGVVFLELITG 153
T D +S GV+ ++G
Sbjct: 192 TAGYNRAVDCWSLGVILFICLSG 214
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE-E 90
LG L + LP D+ + A +GLEYLH + +++ D K+ N+LL +
Sbjct: 137 LGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSD 186
Query: 91 GFHPKLSDFGLA-KLGPVGDKSHVST--RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVF 147
G L DFG A L P G + T + GT + APE M K D++S +
Sbjct: 187 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 246
Query: 148 LELITG 153
L ++ G
Sbjct: 247 LHMLNG 252
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE-E 90
LG L + LP D+ + A +GLEYLH + +++ D K+ N+LL +
Sbjct: 151 LGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSD 200
Query: 91 GFHPKLSDFGLA-KLGPVGDKSHVST--RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVF 147
G L DFG A L P G + T + GT + APE M K D++S +
Sbjct: 201 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 260
Query: 148 LELITG 153
L ++ G
Sbjct: 261 LHMLNG 266
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 9/90 (10%)
Query: 67 YLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
YLH +++RD K N+L +E +SDFGL+K+ GD V + GT GY
Sbjct: 135 YLHRMG---IVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGY 188
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D +S GV+ L+ G
Sbjct: 189 VAPEVLAQKPYSKAVDCWSIGVIAYILLCG 218
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLH+ +I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGT 179
Query: 121 YGYCAPEYAM---TGQLTVKSDVYSFGVVFLELITG 153
Y APE + T D +S GV+ ++G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLH+ +I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGT 179
Query: 121 YGYCAPEYAM---TGQLTVKSDVYSFGVVFLELITG 153
Y APE + T D +S GV+ ++G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 73/194 (37%), Gaps = 19/194 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y D + L+ EF P G L L D A L Y H++
Sbjct: 82 NYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERK-- 135
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+L+ K++DFG + P S + GT Y PE
Sbjct: 136 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTH 190
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQ-----NLVTWARPLFNDRRK--FSKLAD 187
K D++ GV+ E + G DS H E N+ P +D K SKL
Sbjct: 191 DEKVDLWCAGVLCYEFLVGMPPFDSPS-HTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 249
Query: 188 PRLEGRYPIRGLYQ 201
R P++G+ +
Sbjct: 250 YHPPQRLPLKGVME 263
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHL---HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPP 75
D ++ +++YEFM G L + + H+ + EA+++ ++ KGL ++H+
Sbjct: 225 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCHMHENN--- 275
Query: 76 VIYRDFKSSNILL--EEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
++ D K NI+ + KL DFGL A L P K V GT + APE A
Sbjct: 276 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGK 331
Query: 133 QLTVKSDVYSFGVVFLELITG 153
+ +D++S GV+ L++G
Sbjct: 332 PVGYYTDMWSVGVLSYILLSG 352
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 12/96 (12%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLH+ +I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGT 179
Query: 121 YGYCAPEYAM---TGQLTVKSDVYSFGVVFLELITG 153
Y APE + T D +S GV+ ++G
Sbjct: 180 PTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSG 215
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALD--WNTRMKIAAGAAKGLEYLHDKANPPV 76
D + +V E M G L D + KEA + +M +A ++YLH+ +
Sbjct: 91 DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYLHENG---I 141
Query: 77 IYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT Y APE +
Sbjct: 142 IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVG 198
Query: 131 TGQLTVKSDVYSFGVVFLELITG 153
T D +S GV+ ++G
Sbjct: 199 TAGYNRAVDCWSLGVILFICLSG 221
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 73/194 (37%), Gaps = 19/194 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y D + L+ EF P G L L D A L Y H++
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERK-- 134
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+L+ K++DFG + P S + GT Y PE
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQ-----NLVTWARPLFNDRRK--FSKLAD 187
K D++ GV+ E + G DS H E N+ P +D K SKL
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPS-HTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 188 PRLEGRYPIRGLYQ 201
R P++G+ +
Sbjct: 249 YHPPQRLPLKGVME 262
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALD--WNTRMKIAAGAAKGLEYLHDKANPPV 76
D + +V E M G L D + KEA + +M +A ++YLH+ +
Sbjct: 210 DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYLHENG---I 260
Query: 77 IYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT Y APE +
Sbjct: 261 IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVG 317
Query: 131 TGQLTVKSDVYSFGVVFLELITG 153
T D +S GV+ ++G
Sbjct: 318 TAGYNRAVDCWSLGVILFICLSG 340
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 9/99 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL+Y+H + +I+RD K SN+ + E K+ D GLA+ +V+TR
Sbjct: 136 RGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATR-----W 187
Query: 123 YCAPEYAMTG-QLTVKSDVYSFGVVFLELITGRKAIDST 160
Y APE + D++S G + EL+TGR T
Sbjct: 188 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 118 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 172
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 173 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 232
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 233 PGVTSMPDYKPSFPKWARQDFSKVVPP 259
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Query: 49 LDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVG 108
L T ++ A G+EYL + I+RD + N +L E ++DFGL++ G
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRN---FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSG 190
Query: 109 DKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELIT 152
D + A E TV SDV++FGV E++T
Sbjct: 191 DYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMT 234
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 117 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 171
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 172 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 231
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 232 PGVTSMPDYKPSFPKWARQDFSKVVPP 258
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L KE+L G+ YLH K + + D K
Sbjct: 91 VLILELVSGGELFDFL----AQKESLSEEEATSFIKQILDGVNYLHTKK---IAHFDLKP 143
Query: 84 SNILLEEGF----HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + H KL DFGLA + D + GT + APE L +++D
Sbjct: 144 ENIMLLDKNIPIPHIKLIDFGLAH--EIEDGVEFKN-IFGTPEFVAPEIVNYEPLGLEAD 200
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 201 MWSIGVITYILLSG 214
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + + D++S G +F E++T G ID R G + V W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKL 312
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 73/194 (37%), Gaps = 19/194 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y D + L+ EF P G L L D A L Y H++
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQK----HGRFDEQRSATFMEELADALHYCHERK-- 134
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+L+ K++DFG + P S + GT Y PE
Sbjct: 135 -VIHRDIKPENLLMGYKGELKIADFGWSVHAP----SLRRRXMCGTLDYLPPEMIEGKTH 189
Query: 135 TVKSDVYSFGVVFLELITGRKAIDSTRPHGEQ-----NLVTWARPLFNDRRK--FSKLAD 187
K D++ GV+ E + G DS H E N+ P +D K SKL
Sbjct: 190 DEKVDLWCAGVLCYEFLVGMPPFDSPS-HTETHRRIVNVDLKFPPFLSDGSKDLISKLLR 248
Query: 188 PRLEGRYPIRGLYQ 201
R P++G+ +
Sbjct: 249 YHPPQRLPLKGVME 262
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 58/126 (46%), Gaps = 14/126 (11%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE-E 90
LG L + LP D+ + A +GLEYLH + +++ D K+ N+LL +
Sbjct: 153 LGQLIKQMGCLPEDRA-------LYYLGQALEGLEYLHTRR---ILHGDVKADNVLLSSD 202
Query: 91 GFHPKLSDFGLA-KLGPVGDKSHVST--RVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVF 147
G L DFG A L P G + T + GT + APE M K D++S +
Sbjct: 203 GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMM 262
Query: 148 LELITG 153
L ++ G
Sbjct: 263 LHMLNG 268
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+++++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLIIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIIISKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H K N +++RD K NILL E+ K+ DFGL+ K
Sbjct: 125 RIIKQVFSGITYMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ R+ GT Y APE + G K DV+S GV+ L++G
Sbjct: 180 MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H K N +++RD K NILL E+ K+ DFGL+ K
Sbjct: 125 RIIKQVFSGITYMH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ R+ GT Y APE + G K DV+S GV+ L++G
Sbjct: 180 MKDRI-GTAYYIAPE-VLRGTYDEKCDVWSAGVILYILLSG 218
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 115 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 169
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 170 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 229
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 230 PGVTSMPDYKPSFPKWARQDFSKVVPP 256
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 116 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 170
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 171 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 230
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 231 PGVTSMPDYKPSFPKWARQDFSKVVPP 257
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 113 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 167
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 168 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 227
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 228 PGVTSMPDYKPSFPKWARQDFSKVVPP 254
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 19/141 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHL---HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPP 75
D ++ +++YEFM G L + + H+ + EA+++ ++ KGL ++H+
Sbjct: 119 DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCHMHENN--- 169
Query: 76 VIYRDFKSSNILL--EEGFHPKLSDFGL-AKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
++ D K NI+ + KL DFGL A L P K V GT + APE A
Sbjct: 170 YVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDP---KQSVKV-TTGTAEFAAPEVAEGK 225
Query: 133 QLTVKSDVYSFGVVFLELITG 153
+ +D++S GV+ L++G
Sbjct: 226 PVGYYTDMWSVGVLSYILLSG 246
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 137 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 190
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 191 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 250
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 251 LQPTVRNYVENRPKYAGLTFPKL 273
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT 120
++YLH+ +++RD K N+L EE ++DFGL+K+ +++ + + GT
Sbjct: 118 AVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSKM----EQNGIMSTACGT 170
Query: 121 YGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GY APE + D +S GV+ L+ G
Sbjct: 171 PGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG 203
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKL 275
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 20/143 (13%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALD--WNTRMKIAAGAAKGLEYLHDKANPPV 76
D + +V E M G L D + KEA + +M +A ++YLH+ +
Sbjct: 224 DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA------VQYLHENG---I 274
Query: 77 IYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM--- 130
I+RD K N+LL EE K++DFG +K+ +G+ S + T + GT Y APE +
Sbjct: 275 IHRDLKPENVLLSSQEEDCLIKITDFGHSKI--LGETSLMRT-LCGTPTYLAPEVLVSVG 331
Query: 131 TGQLTVKSDVYSFGVVFLELITG 153
T D +S GV+ ++G
Sbjct: 332 TAGYNRAVDCWSLGVILFICLSG 354
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 26/147 (17%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
+GL + H V++RD K N+L+ KL+DFGLA+ V +++ V T
Sbjct: 114 QGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--TLW 168
Query: 123 YCAPEYAM-TGQLTVKSDVYSFGVVFLELIT------GRKAIDST----RPHGEQNLVTW 171
Y APE + + D++S G +F E++T G ID R G + V W
Sbjct: 169 YRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW 228
Query: 172 A--------RPLFND--RRKFSKLADP 188
+P F R+ FSK+ P
Sbjct: 229 PGVTSMPDYKPSFPKWARQDFSKVVPP 255
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKL 268
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 139 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 192
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 193 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 252
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 253 LQPTVRNYVENRPKYAGLTFPKL 275
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 14 IGYCADGDQRL-LVYEFMPLGSLEDHLHDLP-PDKEALDWNTRMKIAAGAAKGLEYLHDK 71
+ Y D+ L +V E+MP G L + + + P+K A + + +A A + ++H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH-- 196
Query: 72 ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
RD K N+LL++ H KL+DFG T V GT Y +PE +
Sbjct: 197 -------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 132 ----GQLTVKSDVYSFGVVFLELITG 153
G + D +S GV E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPEIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ ++ G + +P
Sbjct: 217 KAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 53/96 (55%), Gaps = 10/96 (10%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KG+EYLH + +I+RD K SN+L+ E H K++DFG++ D + + +GT
Sbjct: 148 KGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDA--LLSNTVGTPA 202
Query: 123 YCAPEYAMTGQLTVKS----DVYSFGVVFLELITGR 154
+ APE +++ + S DV++ GV + G+
Sbjct: 203 FMAPE-SLSETRKIFSGKALDVWAMGVTLYCFVFGQ 237
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 186 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 245
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 246 LQPTVRNYVENRPKYAGLTFPKL 268
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ G ++ V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMTPEVVTRY-Y 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKL 267
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 176 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 229
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 230 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 289
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 290 LQPTVRNYVENRPKYAGLTFPKL 312
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 14 IGYCADGDQRL-LVYEFMPLGSLEDHLHDLP-PDKEALDWNTRMKIAAGAAKGLEYLHDK 71
+ Y D+ L +V E+MP G L + + + P+K A + + +A A + ++H
Sbjct: 134 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH-- 191
Query: 72 ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
RD K N+LL++ H KL+DFG T V GT Y +PE +
Sbjct: 192 -------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 243
Query: 132 ----GQLTVKSDVYSFGVVFLELITG 153
G + D +S GV E++ G
Sbjct: 244 QGGDGYYGRECDWWSVGVFLYEMLVG 269
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 131 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 184
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 185 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 244
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 245 LQPTVRNYVENRPKYAGLTFPKL 267
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ + + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TACTNFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + EL+ G
Sbjct: 192 RAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 70/141 (49%), Gaps = 13/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C+ +V E++ G L ++L + L+ + +++ +G+ +L
Sbjct: 70 GVCSKEYPIYIVTEYISNGCLLNYLRS---HGKGLEPSQLLEMCYDVCEGMAFLESHQ-- 124
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT---YGYCAPEYAMT 131
I+RD + N L++ K+SDFG+ + V D +VS+ +GT + APE
Sbjct: 125 -FIHRDLAARNCLVDRDLCVKVSDFGMTRY--VLDDQYVSS--VGTKFPVKWSAPEVFHY 179
Query: 132 GQLTVKSDVYSFGVVFLELIT 152
+ + KSDV++FG++ E+ +
Sbjct: 180 FKYSSKSDVWAFGILMWEVFS 200
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVXEYASGGEVFDYLVAHGRXKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G Y APE + + DV+
Sbjct: 141 AENLLLDADXNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 65/137 (47%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
L+ E+ G + D+L H +KEA ++ + A ++Y H K +++RD K
Sbjct: 91 LIMEYASGGEVFDYLVAHGRMKEKEA---RSKFRQIVSA---VQYCHQKR---IVHRDLK 141
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + VG K G Y APE + + DV+
Sbjct: 142 AENLLLDADMNIKIADFGFSNEFTVGGKLDA---FCGAPPYAAPELFQGKKYDGPEVDVW 198
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 199 SLGVILYTLVSGSLPFD 215
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 25 LVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV E+ G + D+L H +KEA R K ++Y H K +++RD K
Sbjct: 90 LVMEYASGGEVFDYLVAHGRMKEKEA-----RAKFRQ-IVSAVQYCHQKF---IVHRDLK 140
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT-VKSDVY 141
+ N+LL+ + K++DFG + G+K G Y APE + + DV+
Sbjct: 141 AENLLLDADMNIKIADFGFSNEFTFGNKLDA---FCGAPPYAAPELFQGKKYDGPEVDVW 197
Query: 142 SFGVVFLELITGRKAID 158
S GV+ L++G D
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Query: 14 IGYCADGDQRL-LVYEFMPLGSLEDHLHDLP-PDKEALDWNTRMKIAAGAAKGLEYLHDK 71
+ Y D+ L +V E+MP G L + + + P+K A + + +A A + ++H
Sbjct: 139 LFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIH-- 196
Query: 72 ANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMT 131
RD K N+LL++ H KL+DFG T V GT Y +PE +
Sbjct: 197 -------RDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKS 248
Query: 132 ----GQLTVKSDVYSFGVVFLELITG 153
G + D +S GV E++ G
Sbjct: 249 QGGDGYYGRECDWWSVGVFLYEMLVG 274
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 89 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 141
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 199 MWSIGVITYILLSG 212
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP---KLSDFGLAKLGPVGDKSHV 113
I G+ YLH K N +++RD K N+LLE K+ DFGL+ V +
Sbjct: 141 IIKQVLSGVTYLH-KHN--IVHRDLKPENLLLESKEKDALIKIVDFGLS---AVFENQKK 194
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + + K DV+S GV+ L+ G
Sbjct: 195 MKERLGTAYYIAPE-VLRKKYDEKCDVWSIGVILFILLAG 233
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 89 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 141
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 142 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 198
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 199 MWSIGVITYILLSG 212
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP---KLSDFGLAKLGPVGDKSHV 113
I G YLH K N +++RD K N+LLE K+ DFGL+ VG K
Sbjct: 109 IMKQVLSGTTYLH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 162
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + + K DV+S GV+ L+ G
Sbjct: 163 MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 201
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKL---------GPVGDKSHVSTRVMGTYGYCAP 126
VI+RD K SN+L+ K+ DFGLA++ P G +S + + T Y AP
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFVATRWYRAP 191
Query: 127 EYAMT-GQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTW 171
E +T + + DV+S G + EL R+ I R + Q L+ +
Sbjct: 192 EVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLLLIF 236
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR--VMGTY 121
L YLHD +I+RD K+ NIL KL+DFG++ ++ + R +GT
Sbjct: 120 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA---KNTRTXIQRRDSFIGTP 173
Query: 122 GYCAPEYAMTGQ-----LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN 167
+ APE M K+DV+S G+ +E+ + PH E N
Sbjct: 174 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPPHHELN 218
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ + + T + T Y
Sbjct: 136 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TASTNFMMTPYVVTRYY 189
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDST 160
APE + D++S G + EL+ G T
Sbjct: 190 RAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGT 226
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 14/134 (10%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+L+ E + G L D L +KE+L + G+ YLH + + + D K
Sbjct: 90 ILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKP 142
Query: 84 SNILLEEGFHPK----LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSD 139
NI+L + PK + DFGLA G++ + GT + APE L +++D
Sbjct: 143 ENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEAD 199
Query: 140 VYSFGVVFLELITG 153
++S GV+ L++G
Sbjct: 200 MWSIGVITYILLSG 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 6/85 (7%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT 135
V++RD K N+LL+ + K++DFGL+ + G+ S G+ Y APE ++G+L
Sbjct: 132 VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSC---GSPNYAAPE-VISGRLY 187
Query: 136 V--KSDVYSFGVVFLELITGRKAID 158
+ D++S GV+ L+ G D
Sbjct: 188 AGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 22/143 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLAR---TAGTSFMMTPYVVTRYY 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELI------TGRKAID----------STRPHGEQN 167
APE + D++S G + E++ GR ID + P +
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKK 251
Query: 168 LVTWARPLFNDRRKFSKLADPRL 190
L R +R K++ L P+L
Sbjct: 252 LQPTVRNYVENRPKYAGLTFPKL 274
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 50/108 (46%), Gaps = 15/108 (13%)
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK----------- 103
+ I A+ +E+LH K +++RD K SNI K+ DFGL
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 104 LGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
L P+ + + +V GT Y +PE + K D++S G++ EL+
Sbjct: 178 LTPMPAYARHTGQV-GTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 76/160 (47%), Gaps = 25/160 (15%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
G C GD+ +LV EF+ GSL+ +L +K ++ ++++A A + +L +
Sbjct: 79 GVCFCGDENILVQEFVKFGSLDTYLKK---NKNCINILWKLEVAKQLAWAMHFLEENT-- 133
Query: 75 PVIYRDFKSSNILL------EEGFHP--KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAP 126
+I+ + + NILL + G P KLSD G++ V K + R+ + P
Sbjct: 134 -LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISI--TVLPKDILQERI----PWVPP 186
Query: 127 EYAMTGQ-LTVKSDVYSFGVVFLELITG----RKAIDSTR 161
E + L + +D +SFG E+ +G A+DS R
Sbjct: 187 ECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQR 226
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 45/90 (50%), Gaps = 6/90 (6%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + + T Y
Sbjct: 140 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMVPFVVTRYY 193
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
APE + D++S G + E+I G
Sbjct: 194 RAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 55 MKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVS 114
+ I A+ +E+LH K +++RD K SNI K+ DFGL ++
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 115 TRVMGTYG----------YCAPEYAMTGQLTVKSDVYSFGVVFLELI 151
M Y Y +PE + K D++S G++ EL+
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMK-------IAAGAAKGLEYL 68
YC++ R L Y + L +L +L DL K D N +++ + A G+ +L
Sbjct: 93 YCSETTDRFL-YIALELCNL--NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 69 HDKANPPVIYRDFKSSNILLE-------------EGFHPKLSDFGLAKLGPVGDKSHVST 115
H + +I+RD K NIL+ E +SDFGL K G
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 116 --RVMGTYGYCAPEY---AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLV 169
GT G+ APE + +LT D++S G VF +++ K + E N++
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 75/179 (41%), Gaps = 31/179 (17%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMK-------IAAGAAKGLEYL 68
YC++ R L Y + L +L +L DL K D N +++ + A G+ +L
Sbjct: 93 YCSETTDRFL-YIALELCNL--NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 69 HDKANPPVIYRDFKSSNILLE-------------EGFHPKLSDFGLAKLGPVGDKSHVST 115
H + +I+RD K NIL+ E +SDFGL K G
Sbjct: 150 H---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 116 --RVMGTYGYCAPEY---AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLV 169
GT G+ APE + +LT D++S G VF +++ K + E N++
Sbjct: 207 LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNII 265
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 24/137 (17%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILL----EEGFHPKLSDFGLAKL-----GPVGDKSHVS 114
G+ YLH V++RD K +NIL+ E K++D G A+L P+ D
Sbjct: 140 GIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD--- 193
Query: 115 TRVMGTYGYCAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
V+ T+ Y APE + + K+ D+++ G +F EL+T H Q + +
Sbjct: 194 -PVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIF-----HCRQEDIKTSN 247
Query: 174 PLFNDR--RKFSKLADP 188
P +D+ R F+ + P
Sbjct: 248 PYHHDQLDRIFNVMGFP 264
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 10/100 (10%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFH---PKLSDFGLAKLGPVGDKSHV 113
I G YLH K N +++RD K N+LLE K+ DFGL+ VG K
Sbjct: 126 IMKQVLSGTTYLH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--- 179
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + + K DV+S GV+ L+ G
Sbjct: 180 MKERLGTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCG 218
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMK-------IAAGAAKGLEYL 68
YC++ R L Y + L +L +L DL K D N +++ + A G+ +L
Sbjct: 75 YCSETTDRFL-YIALELCNL--NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 69 HDKANPPVIYRDFKSSNILLE-------------EGFHPKLSDFGLAKLGPVGDKSHVST 115
H +I+RD K NIL+ E +SDFGL K G S +
Sbjct: 132 HSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 116 --RVMGTYGYCAPEYAMTG-------QLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQ 166
GT G+ APE +LT D++S G VF +++ K + E
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 167 NLV 169
N++
Sbjct: 249 NII 251
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 15 GYCADGDQRLLVYEFMPLGSL---EDHLHDLPPDKEALDWNTRMK-IAAGAAKGLEYLHD 70
G + D+ ++YE+M S+ +++ L + +K I Y+H+
Sbjct: 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN 169
Query: 71 KANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM 130
+ N + +RD K SNIL+++ KLSDFG ++ + DK +R GTY + PE+
Sbjct: 170 EKN--ICHRDVKPSNILMDKNGRVKLSDFGESEY--MVDKKIKGSR--GTYEFMPPEFFS 223
Query: 131 --TGQLTVKSDVYSFGVV 146
+ K D++S G+
Sbjct: 224 NESSYNGAKVDIWSLGIC 241
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 18/147 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR---VMGTYGYCAPEYAMTGQLT 135
RD K N+L+++ + +++DFG AK V R + GT Y AP ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK--------RVKGRTWXLCGTPEYLAPAIILSKGYN 216
Query: 136 VKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 217 KAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 39 LHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPK--- 95
L D +KE+L + G+ YLH + + + D K NI+L + PK
Sbjct: 101 LFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRI 157
Query: 96 -LSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ DFGLA G++ + GT + APE L +++D++S GV+ L++G
Sbjct: 158 KIIDFGLAHKIDFGNEFK---NIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSG 213
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR--VMGTY 121
L YLHD +I+RD K+ NIL KL+DFG++ + + R +GT
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDXFIGTP 199
Query: 122 GYCAPEYAMTGQ-----LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN 167
+ APE M K+DV+S G+ +E+ + PH E N
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPPHHELN 244
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEE-GFHPKLSDFGLAK-LGPVGDKSHVSTRVMGT 120
+GL+YLHD +++RD K N+L+ K+SDFG +K L + + T GT
Sbjct: 133 EGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GT 186
Query: 121 YGYCAPEYAMTGQ--LTVKSDVYSFGVVFLELITGR 154
Y APE G +D++S G +E+ TG+
Sbjct: 187 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 222
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR--VMGTY 121
L YLHD +I+RD K+ NIL KL+DFG++ + + R +GT
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRXIQRRDSFIGTP 199
Query: 122 GYCAPEYAMTGQ-----LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN 167
+ APE M K+DV+S G+ +E+ + PH E N
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPPHHELN 244
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 11/95 (11%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKSHVSTRVM 118
+ + YLH+ +++RD K N+L P K++DFGL+K + + + V
Sbjct: 159 EAVAYLHENG---IVHRDLKPENLLYATP-APDAPLKIADFGLSK---IVEHQVLMKTVC 211
Query: 119 GTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
GT GYCAPE + D++S G++ L+ G
Sbjct: 212 GTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 50/111 (45%), Gaps = 20/111 (18%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR--VMGTY 121
L YLHD +I+RD K+ NIL KL+DFG++ + + R +GT
Sbjct: 147 ALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS----AKNTRTIQRRDSFIGTP 199
Query: 122 GYCAPEYAMTGQ-----LTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQN 167
+ APE M K+DV+S G+ +E+ + PH E N
Sbjct: 200 YWMAPEVVMCETSKDRPYDYKADVWSLGITLIEM------AEIEPPHHELN 244
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 65/151 (43%), Gaps = 26/151 (17%)
Query: 19 DGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
D +V E++ G + HL + E + R AA EYLH + +IY
Sbjct: 112 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQIVLTFEYLH---SLDLIY 164
Query: 79 RDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG-TYGYC------APEYAMT 131
RD K N+L+++ + +++DFG AK RV G T+ C APE ++
Sbjct: 165 RDLKPENLLIDQQGYIQVTDFGFAK------------RVKGRTWXLCGTPEALAPEIILS 212
Query: 132 GQLTVKSDVYSFGVVFLELITGRKAIDSTRP 162
D ++ GV+ E+ G + +P
Sbjct: 213 KGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEG 91
L +L D P+ A + M +A + L Y+H RD K N+LL+
Sbjct: 177 LLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVN 227
Query: 92 FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEY--AM---TGQLTVKSDVYSFGVV 146
H +L+DFG + L D + S+ +GT Y +PE AM G+ + D +S GV
Sbjct: 228 GHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 286
Query: 147 FLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKF 182
E++ G P ++LV + N +F
Sbjct: 287 MYEMLYGET------PFYAESLVETYGKIMNHEERF 316
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 89 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 142
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 143 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 200
Query: 144 GVVFLELI 151
GV E++
Sbjct: 201 GVCMWEIL 208
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 90 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 143
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 144 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 201
Query: 144 GVVFLELI 151
GV E++
Sbjct: 202 GVCMWEIL 209
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEE-GFHPKLSDFGLAK-LGPVGDKSHVSTRVMGT 120
+GL+YLHD +++RD K N+L+ K+SDFG +K L + + T GT
Sbjct: 119 EGLKYLHDNQ---IVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT---GT 172
Query: 121 YGYCAPEYAMTGQ--LTVKSDVYSFGVVFLELITGR 154
Y APE G +D++S G +E+ TG+
Sbjct: 173 LQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGK 208
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 92 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 145
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 146 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 203
Query: 144 GVVFLELI 151
GV E++
Sbjct: 204 GVCMWEIL 211
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 21/156 (13%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEG 91
L +L D P+ A + M +A + L Y+H RD K N+LL+
Sbjct: 161 LLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVH---------RDIKPDNVLLDVN 211
Query: 92 FHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEY--AM---TGQLTVKSDVYSFGVV 146
H +L+DFG + L D + S+ +GT Y +PE AM G+ + D +S GV
Sbjct: 212 GHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVC 270
Query: 147 FLELITGRKAIDSTRPHGEQNLVTWARPLFNDRRKF 182
E++ G P ++LV + N +F
Sbjct: 271 MYEMLYGET------PFYAESLVETYGKIMNHEERF 300
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 87 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 141 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 144 GVVFLELI 151
GV E++
Sbjct: 199 GVCMWEIL 206
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 87 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 141 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 144 GVVFLELI 151
GV E++
Sbjct: 199 GVCMWEIL 206
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H +++RD K N+LLE + + ++ DFGL+ K
Sbjct: 130 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 186
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + G K DV+S GV+ L++G
Sbjct: 187 DK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 115 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 168
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 169 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 226
Query: 144 GVVFLELI 151
GV E++
Sbjct: 227 GVCMWEIL 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 65/150 (43%), Gaps = 35/150 (23%)
Query: 19 DGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
DG +V E M G L D + ++EA + K +EYLH + V
Sbjct: 87 DGKYVYVVTELMKGGELLDKILRQKFFSEREA------SAVLFTITKTVEYLHAQG---V 137
Query: 77 IYRDFKSSNIL-LEEGFHP---KLSDFGLAK---------LGPVGDKSHVSTRVMGTYGY 123
++RD K SNIL ++E +P ++ DFG AK + P + V+ V+ GY
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGY 197
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
A D++S GV+ ++TG
Sbjct: 198 DA-----------ACDIWSLGVLLYTMLTG 216
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 84 IIMELCTLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 137
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 138 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 195
Query: 144 GVVFLELI 151
GV E++
Sbjct: 196 GVCMWEIL 203
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 45/218 (20%)
Query: 25 LVYEFMPLGSLEDH--LHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFK 82
LV+E+ DH LH+L + + + I + + + H K N I+RD K
Sbjct: 79 LVFEYC------DHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH-KHN--CIHRDVK 129
Query: 83 SSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAM-TGQLTVKSDVY 141
NIL+ + KL DFG A+L G + V T Y +PE + Q DV+
Sbjct: 130 PENILITKHSVIKLCDFGFARLL-TGPSDYYDDEV-ATRWYRSPELLVGDTQYGPPVDVW 187
Query: 142 SFGVVFLELITG----------------RKAIDSTRPHGEQNLVTWARPLFNDRRKFS-- 183
+ G VF EL++G RK + P +Q +F+ + FS
Sbjct: 188 AIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ--------VFSTNQYFSGV 239
Query: 184 KLADPR----LEGRYPIRGLYQALAVASMCIQEQAATR 217
K+ DP LE ++P Y AL + C+ R
Sbjct: 240 KIPDPEDMEPLELKFPNIS-YPALGLLKGCLHMDPTER 276
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 7/127 (5%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 87 IIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFG 144
N+L+ KL DFGL++ S + + APE + T SDV+ FG
Sbjct: 141 NVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPI-KWMAPESINFRRFTSASDVWMFG 199
Query: 145 VVFLELI 151
V E++
Sbjct: 200 VCMWEIL 206
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H +++RD K N+LLE + + ++ DFGL+ K
Sbjct: 153 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 209
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + G K DV+S GV+ L++G
Sbjct: 210 DK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 246
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 143 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 196
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELIT------GRKAIDSTRPHGEQ 166
APE + D++S G + E++ GR ID EQ
Sbjct: 197 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 245
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELIT------GRKAIDSTRPHGEQ 166
APE + D++S G + E++ GR ID EQ
Sbjct: 192 RAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H +++RD K N+LLE + + ++ DFGL+ K
Sbjct: 154 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 210
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + G K DV+S GV+ L++G
Sbjct: 211 DK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 247
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 20 GDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYR 79
G L+ + G L + L + + L +T +KI + ++++H + PP+I+R
Sbjct: 105 GQAEFLLLTELCKGQLVEFLKKME-SRGPLSCDTVLKIFYQTCRAVQHMH-RQKPPIIHR 162
Query: 80 DFKSSNILLEEGFHPKLSDFGLA 102
D K N+LL KL DFG A
Sbjct: 163 DLKVENLLLSNQGTIKLCDFGSA 185
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ S + T + T Y
Sbjct: 132 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLAR---TAGTSFMMTPYVVTRYY 185
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELIT------GRKAIDSTRPHGEQ 166
APE + D++S G + E++ GR ID EQ
Sbjct: 186 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 234
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 467 IIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 520
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 521 NVLVSSNDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 144 GVVFLELI 151
GV E++
Sbjct: 579 GVCMWEIL 586
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 30/158 (18%)
Query: 18 ADGDQRL-LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
AD D+ + LV+++M E LH + L+ + + K ++YLH +
Sbjct: 80 ADNDRDVYLVFDYM-----ETDLHAVI-RANILEPVHKQYVVYQLIKVIKYLHSGG---L 130
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAK-------------------LGPVGDKSHVSTRV 117
++RD K SNILL H K++DFGL++ D + T
Sbjct: 131 LHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDY 190
Query: 118 MGTYGYCAPEYAM-TGQLTVKSDVYSFGVVFLELITGR 154
+ T Y APE + + + T D++S G + E++ G+
Sbjct: 191 VATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 56/145 (38%), Gaps = 11/145 (7%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y D + L+ E+ P G L L D I A L Y H K
Sbjct: 90 NYFYDRRRIYLILEYAPRGELYKELQK----SCTFDEQRTATIMEELADALMYCHGKK-- 143
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
VI+RD K N+LL K++DFG + P S + GT Y PE
Sbjct: 144 -VIHRDIKPENLLLGLKGELKIADFGWSVHAP----SLRRKTMCGTLDYLPPEMIEGRMH 198
Query: 135 TVKSDVYSFGVVFLELITGRKAIDS 159
K D++ GV+ EL+ G +S
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFES 223
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 24 LLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKS 83
+LV E++ G L D + D + LD MK +G+ ++H +++ D K
Sbjct: 162 VLVMEYVDGGELFDRIIDESYNLTELDTILFMK---QICEGIRHMHQMY---ILHLDLKP 215
Query: 84 SNILL--EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVY 141
NIL + K+ DFGLA+ +K V+ GT + APE ++ +D++
Sbjct: 216 ENILCVNRDAKQIKIIDFGLARRYKPREKLKVN---FGTPEFLAPEVVNYDFVSFPTDMW 272
Query: 142 SFGVVFLELITG 153
S GV+ L++G
Sbjct: 273 SVGVIAYMLLSG 284
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y+H +++RD K N+LLE + + ++ DFGL+ K
Sbjct: 136 RIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMK 192
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + G K DV+S GV+ L++G
Sbjct: 193 DK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 229
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 8/106 (7%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHV 113
I + ++HD V++RD K N+L + K+ DFG A+L P D +
Sbjct: 111 IMRKLVSAVSHMHDVG---VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKP-PDNQPL 166
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDS 159
T T Y APE D++S GV+ +++G+ S
Sbjct: 167 KTPCF-TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSH 112
+I G+ Y H +++RD K N+LLE + + ++ DFGL+ K
Sbjct: 130 RIIRQVLSGITYXH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXK 186
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+GT Y APE + G K DV+S GV+ L++G
Sbjct: 187 DK---IGTAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSG 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 87 IIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 140
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 141 NVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 198
Query: 144 GVVFLELI 151
GV E++
Sbjct: 199 GVCMWEIL 206
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Query: 78 YRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVK 137
+RD K NIL+ L DFG+A +K +GT Y APE T +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIAS-ATTDEKLTQLGNTVGTLYYXAPERFSESHATYR 215
Query: 138 SDVYSFGVVFLELITG 153
+D+Y+ V E +TG
Sbjct: 216 ADIYALTCVLYECLTG 231
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 9/128 (7%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E LG L L K +LD + + A + L YL K ++RD +
Sbjct: 467 IIMELCTLGELRSFLQ---VRKFSLDLASLILYAYQLSTALAYLESKR---FVHRDIAAR 520
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHV-STRVMGTYGYCAPEYAMTGQLTVKSDVYSF 143
N+L+ KL DFGL++ + D ++ +++ + APE + T SDV+ F
Sbjct: 521 NVLVSATDCVKLGDFGLSRY--MEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMF 578
Query: 144 GVVFLELI 151
GV E++
Sbjct: 579 GVCMWEIL 586
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
G+++LH +I+RD K SNI+++ K+ DFGLA+ G + V+ Y Y
Sbjct: 138 GIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTA--GTSFMMEPEVVTRY-Y 191
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELIT------GRKAIDSTRPHGEQ 166
APE + D++S G + E++ GR ID EQ
Sbjct: 192 RAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQ 240
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 14/141 (9%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y DG +++ EF P G+++ + +L D+ + ++ + + L +LH K
Sbjct: 84 AYYHDGKLWIMI-EFCPGGAVDAIMLEL--DRGLTEPQIQV-VCRQMLEALNFLHSKR-- 137
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQL 134
+I+RD K+ N+L+ +L+DFG++ + S +GT + APE M +
Sbjct: 138 -IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDS--FIGTPYWMAPEVVMCETM 194
Query: 135 T-----VKSDVYSFGVVFLEL 150
K+D++S G+ +E+
Sbjct: 195 KDTPYDYKADIWSLGITLIEM 215
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 4/77 (5%)
Query: 76 VIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLT 135
+I+RD K NI++ E F KL DFG A ++ + GT YCAPE M
Sbjct: 151 IIHRDIKDENIVIAEDFTIKLIDFGSAAY---LERGKLFYTFCGTIEYCAPEVLMGNPYR 207
Query: 136 -VKSDVYSFGVVFLELI 151
+ +++S GV L+
Sbjct: 208 GPELEMWSLGVTLYTLV 224
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL + H + V++RD K N+L+ KL+DFGLA+ + + + + V T
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV--TLW 166
Query: 123 YCAPEYAMTGQLTVKS-DVYSFGVVFLELITGRKAI 157
Y P+ +L S D++S G +F EL + +
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 70/143 (48%), Gaps = 18/143 (12%)
Query: 15 GYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANP 74
Y DG +++ EF P G+++ + +L D+ + ++ + + L +LH K
Sbjct: 76 AYYHDGKLWIMI-EFCPGGAVDAIMLEL--DRGLTEPQIQV-VCRQMLEALNFLHSKR-- 129
Query: 75 PVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTR--VMGTYGYCAPEYAMTG 132
+I+RD K+ N+L+ +L+DFG++ + + R +GT + APE M
Sbjct: 130 -IIHRDLKAGNVLMTLEGDIRLADFGVS----AKNLKTLQKRDSFIGTPYWMAPEVVMCE 184
Query: 133 QLT-----VKSDVYSFGVVFLEL 150
+ K+D++S G+ +E+
Sbjct: 185 TMKDTPYDYKADIWSLGITLIEM 207
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPK-LSDFGLAKLGPVGDKSHVS 114
+I+ GL+Y+H + +I+ D K N+L+E P+ L +A LG
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 115 TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + T Y +PE + +D++S + ELITG
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 73/183 (39%), Gaps = 35/183 (19%)
Query: 16 YCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEALDWNTRMK-------IAAGAAKGLEYL 68
YC++ R L Y + L +L +L DL K D N +++ + A G+ +L
Sbjct: 75 YCSETTDRFL-YIALELCNL--NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 69 HDKANPPVIYRDFKSSNILLE-------------EGFHPKLSDFGLAKLGPVGDKSHVST 115
H +I+RD K NIL+ E +SDFGL K G
Sbjct: 132 HSLK---IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 116 --RVMGTYGYCAPEYAMTG-------QLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQ 166
GT G+ APE +LT D++S G VF +++ K + E
Sbjct: 189 LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES 248
Query: 167 NLV 169
N++
Sbjct: 249 NII 251
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPK-LSDFGLAKLGPVGDKSHVS 114
+I+ GL+Y+H + +I+ D K N+L+E P+ L +A LG
Sbjct: 135 QISKQLLLGLDYMHRRCG--IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 115 TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + T Y +PE + +D++S + ELITG
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 55/122 (45%), Gaps = 26/122 (21%)
Query: 46 KEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLG 105
K LD N +IA KG+ YLH K ++++D KS N+ + G ++DFGL +
Sbjct: 124 KIVLDVNKTRQIAQEIVKGMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSIS 179
Query: 106 PV------GDKSHVSTRVMGTYGYCAPEYAMTGQL-----------TVKSDVYSFGVVFL 148
V DK + G + APE + QL + SDV++ G ++
Sbjct: 180 GVLQAGRREDKLRIQN---GWLCHLAPE--IIRQLSPDTEEDKLPFSKHSDVFALGTIWY 234
Query: 149 EL 150
EL
Sbjct: 235 EL 236
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ L Y HD +I+RD K N+LL E KL DFG+A +G+ V+ +G
Sbjct: 141 EALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAI--QLGESGLVAGGRVG 195
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + APE DV+ GV+ L++G
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 64/151 (42%), Gaps = 13/151 (8%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
L+ F G+L + + L L + + + G +GLE +H K +RD K +
Sbjct: 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYA---HRDLKPT 163
Query: 85 NILLEEGFHPKLSDFGLAKLGPV---GDKSHVSTRVMG----TYGYCAPE-YAMTGQLTV 136
NILL + P L D G + G + ++ + T Y APE +++ +
Sbjct: 164 NILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVI 223
Query: 137 --KSDVYSFGVVFLELITGRKAIDSTRPHGE 165
++DV+S G V ++ G D G+
Sbjct: 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGD 254
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 9/96 (9%)
Query: 62 AKGLEYLHDKANPPVIYRDFKSSNIL-LEEGFHP---KLSDFGLAKLGPVGDKSHVSTRV 117
K +EYLH + V++RD K SNIL ++E +P ++ DFG AK + ++ +
Sbjct: 126 TKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAK--QLRAENGLLXTP 180
Query: 118 MGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + APE D++S GV+ +TG
Sbjct: 181 CYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG 216
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
DG LV E M G L D + ++EA + K +EYLH + V
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREA------SFVLHTIGKTVEYLHSQG---V 142
Query: 77 IYRDFKSSNIL-LEEGFHP---KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
++RD K SNIL ++E +P ++ DFG AK + ++ + T + APE
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D++S G++ ++ G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAG 221
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK-LGPVGDKSHVSTRVMGTYG 122
GLEYLH + ++++D K N+LL G K+S G+A+ L P T G+
Sbjct: 121 GLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTS-QGSPA 176
Query: 123 YCAPEYA--MTGQLTVKSDVYSFGVVFLELITG 153
+ PE A + K D++S GV + TG
Sbjct: 177 FQPPEIANGLDTFSGFKVDIWSAGVTLYNITTG 209
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E P G L H L +K +L T + + K + YL ++RD
Sbjct: 101 IIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVR 154
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ KL DFGL++ + D+ + V + +PE + T SDV+ F
Sbjct: 155 NILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 212
Query: 144 GVVFLELIT 152
V E+++
Sbjct: 213 AVCMWEILS 221
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 6/89 (6%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYG 122
KGL + H + V++RD K N+L+ KL++FGLA+ + + + + V T
Sbjct: 112 KGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV--TLW 166
Query: 123 YCAPEYAMTGQLTVKS-DVYSFGVVFLEL 150
Y P+ +L S D++S G +F EL
Sbjct: 167 YRPPDVLFGAKLYSTSIDMWSAGCIFAEL 195
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 19 DGDQRLLVYEFMPLGSLEDHL--HDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPV 76
DG LV E M G L D + ++EA + K +EYLH + V
Sbjct: 92 DGKHVYLVTELMRGGELLDKILRQKFFSEREA------SFVLHTIGKTVEYLHSQG---V 142
Query: 77 IYRDFKSSNIL-LEEGFHP---KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
++RD K SNIL ++E +P ++ DFG AK + ++ + T + APE
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFGFAK--QLRAENGLLMTPCYTANFVAPEVLKRQ 200
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D++S G++ ++ G
Sbjct: 201 GYDEGCDIWSLGILLYTMLAG 221
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E P G L H L +K +L T + + K + YL ++RD
Sbjct: 89 IIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVR 142
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ KL DFGL++ + D+ + V + +PE + T SDV+ F
Sbjct: 143 NILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 200
Query: 144 GVVFLELIT 152
V E+++
Sbjct: 201 AVCMWEILS 209
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ + Y H +++R+ K N+LL +G KL+DFGLA V D S G
Sbjct: 139 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHGFAG 192
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T GY +PE + D+++ GV+ L+ G
Sbjct: 193 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 9/129 (6%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRDFKSS 84
++ E P G L H L +K +L T + + K + YL ++RD
Sbjct: 85 IIMELYPYGELG---HYLERNKNSLKVLTLVLYSLQICKAMAYLESIN---CVHRDIAVR 138
Query: 85 NILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGT-YGYCAPEYAMTGQLTVKSDVYSF 143
NIL+ KL DFGL++ + D+ + V + +PE + T SDV+ F
Sbjct: 139 NILVASPECVKLGDFGLSRY--IEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMF 196
Query: 144 GVVFLELIT 152
V E+++
Sbjct: 197 AVCMWEILS 205
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFG-LAKLGPVGDKSHVSTRVMGTYG 122
L YLH ++Y D K NI+L E KL D G ++++ G + GT G
Sbjct: 194 ALSYLHSIG---LVYNDLKPENIMLTEE-QLKLIDLGAVSRINSFG-------YLYGTPG 242
Query: 123 YCAPEYAMTGQLTVKSDVYSFG 144
+ APE TG TV +D+Y+ G
Sbjct: 243 FQAPEIVRTGP-TVATDIYTVG 263
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 125 APEY-----------AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 268
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 327
Query: 234 TYDPN 238
T+ N
Sbjct: 328 THPVN 332
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
V++RD K N+LL +G KL+DFGLA + GD+ GT GY +PE
Sbjct: 124 VVHRDLKPENLLLASKCKGAAVKLADFGLA-IEVQGDQQ-AWFGFAGTPGYLSPEVLRKE 181
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 182 AYGKPVDIWACGVILYILLVG 202
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 223
Query: 125 APEY-----------AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 268
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 327
Query: 234 TYDPN 238
T+ N
Sbjct: 328 THPVN 332
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ + Y H +++R+ K N+LL +G KL+DFGLA V D S G
Sbjct: 115 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHGFAG 168
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T GY +PE + D+++ GV+ L+ G
Sbjct: 169 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ + Y H +++R+ K N+LL +G KL+DFGLA V D S G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHGFAG 169
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T GY +PE + D+++ GV+ L+ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 9/94 (9%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ + Y H +++R+ K N+LL +G KL+DFGLA V D S G
Sbjct: 116 ESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLAI--EVND-SEAWHGFAG 169
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T GY +PE + D+++ GV+ L+ G
Sbjct: 170 TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 38.1 bits (87), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 50/121 (41%), Gaps = 34/121 (28%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKL------------ 104
I G ++H+ +I+RD K +N LL + K+ DFGLA+
Sbjct: 134 ILYNLLLGENFIHESG---IIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVND 190
Query: 105 -------GPVGDK------SHVSTRVMGTYGYCAPEYAMTGQLTVKS-DVYSFGVVFLEL 150
GP SHV TR Y APE + + KS D++S G +F EL
Sbjct: 191 LEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 151 I 151
+
Sbjct: 246 L 246
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 46/101 (45%), Gaps = 14/101 (13%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFG-LAKLGPVGDKSHVSTRVMGTYGY 123
L +LH + +++ D K +NI L KL DFG L +LG G G Y
Sbjct: 170 LAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----AGEVQEGDPRY 222
Query: 124 CAPEYAMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHG 164
APE + G +DV+S G+ LE+ A + PHG
Sbjct: 223 MAPEL-LQGSYGTAADVFSLGLTILEV-----ACNMELPHG 257
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 37/129 (28%)
Query: 57 IAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK-------LGPVGD 109
I G +++H+ +I+RD K +N LL + K+ DFGLA+ + V D
Sbjct: 136 ILYNLLLGEKFIHESG---IIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVND 192
Query: 110 ---------------------KSHVSTRVMGTYGYCAPEYAMTGQ-LTVKSDVYSFGVVF 147
SHV TR Y APE + + T D++S G +F
Sbjct: 193 LEEKEENEEPGPHNKNLKKQLTSHVVTR-----WYRAPELILLQENYTNSIDIWSTGCIF 247
Query: 148 LELITGRKA 156
EL+ K+
Sbjct: 248 AELLNMMKS 256
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
+++RD K N+LL +G KL+DFGLA + GD+ GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
V++RD K N+LL +G KL+DFGLA V + GT GY +PE
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 200 PYGKPVDLWACGVILYILLVG 220
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
+++RD K N+LL +G KL+DFGLA V + GT GY +PE
Sbjct: 151 IVHRDLKPENLLLASKCKGAAVKLADFGLAI--EVQGEQQAWFGFAGTPGYLSPEVLRKD 208
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 209 PYGKPVDIWACGVILYILLVG 229
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.4 bits (85), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 176
Query: 125 APEYA-----------MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 177 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 221
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 222 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 280
Query: 234 TYDPN 238
T+ N
Sbjct: 281 THPVN 285
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 121 LEAVHTIHQHGIVHSDLKPANFLIVDGML-KLIDFGIANQMQPDTTSVVKDSQVGTVNYM 179
Query: 125 APEYA-----------MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 180 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 224
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 225 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 283
Query: 234 TYDPN 238
T+ N
Sbjct: 284 THPVN 288
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 117 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 175
Query: 125 APEYA-----------MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 176 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 220
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 221 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 279
Query: 234 TYDPN 238
T+ N
Sbjct: 280 THPVN 284
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGTVNYM 195
Query: 125 APEYA-----------MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 240
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 299
Query: 234 TYDPN 238
T+ N
Sbjct: 300 THPVN 304
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
+++RD K N+LL +G KL+DFGLA + GD+ GT GY +PE
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLA-IEVQGDQ-QAWFGFAGTPGYLSPEVLRKD 181
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 182 PYGKPVDMWACGVILYILLVG 202
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 29/118 (24%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAK-------------LGPVGDK 110
G++Y+H +++RD K +N L+ + K+ DFGLA+ + P D
Sbjct: 168 GVKYVHSAG---ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDD 224
Query: 111 SHVST---------RVMG---TYGYCAPEYAMTGQ-LTVKSDVYSFGVVFLELITGRK 155
++ T ++ G T Y APE + + T DV+S G +F EL+ K
Sbjct: 225 MNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIK 282
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 6/72 (8%)
Query: 95 KLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGR 154
KL DFG A KS ++ T Y APE + V SD++SFG V EL TG
Sbjct: 202 KLIDFGCATF-----KSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG- 255
Query: 155 KAIDSTRPHGEQ 166
+ T H E
Sbjct: 256 SLLFRTHEHMEH 267
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP--KLSDFGLAKLGPVGDKSHV 113
K A + L+ LH +I+ D K NILL++ K+ DFG + V
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRV 256
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + + Y APE + + + D++S G + EL+TG
Sbjct: 257 YTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 10/100 (10%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP--KLSDFGLAKLGPVGDKSHV 113
K A + L+ LH +I+ D K NILL++ K+ DFG + V
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRV 256
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + + Y APE + + + D++S G + EL+TG
Sbjct: 257 YTXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A S V +G Y
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVKDSQVGAVNYM 223
Query: 125 APEY-----------AMTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 224 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 268
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 269 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 327
Query: 234 TYDPN 238
T+ N
Sbjct: 328 THPVN 332
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPV-GDKSHVSTRVMGTYG 122
GL LH+ V++RD NILL + + DF LA+ +K+H T
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RW 198
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELITGRKAI 157
Y APE M + T D++S G V E+ RKA+
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 36.2 bits (82), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPV-GDKSHVSTRVMGTYG 122
GL LH+ V++RD NILL + + DF LA+ +K+H T
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH----RW 198
Query: 123 YCAPEYAMTGQ-LTVKSDVYSFGVVFLELITGRKAI 157
Y APE M + T D++S G V E+ RKA+
Sbjct: 199 YRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 39/81 (48%), Gaps = 5/81 (6%)
Query: 76 VIYRDFKSSNILLE---EGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTG 132
V++R+ K N+LL +G KL+DFGLA V + GT GY +PE
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAI--EVEGEQQAWFGFAGTPGYLSPEVLRKD 188
Query: 133 QLTVKSDVYSFGVVFLELITG 153
D+++ GV+ L+ G
Sbjct: 189 PYGKPVDLWACGVILYILLVG 209
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 70/185 (37%), Gaps = 28/185 (15%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYC 124
LE +H +++ D K +N L+ +G KL DFG+A V +GT Y
Sbjct: 137 LEAVHTIHQHGIVHSDLKPANFLIVDGM-LKLIDFGIANQMQPDXXXVVKDSQVGTVNYM 195
Query: 125 APEYA-----------MTGQLTVKSDVYSFGVVFLELITGRKAIDSTRPHGEQNLVTWAR 173
PE +++ KSDV+S G + + G+ T +
Sbjct: 196 PPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK---------------TPFQ 240
Query: 174 PLFNDRRKFSKLADPRLEGRYPIRGLYQALAVASMCIQEQAATRPLIGDVVTALSYLANQ 233
+ N K + DP E +P V C++ R I +++ A Y+ Q
Sbjct: 241 QIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL-AHPYVQIQ 299
Query: 234 TYDPN 238
T+ N
Sbjct: 300 THPVN 304
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 35.4 bits (80), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 119 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 170
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 171 HNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 165 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 216
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 217 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 121 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 172
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N+L P KL+DFG AK S
Sbjct: 126 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK----ETTS 177
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 178 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 220
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N+L P KL+DFG AK S
Sbjct: 127 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK----ETTS 178
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 179 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 221
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 35.0 bits (79), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 171 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 222
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 223 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 265
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 119 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 170
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 171 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 213
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N+L P KL+DFG AK S
Sbjct: 125 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK----ETTS 176
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 177 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 219
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 35.0 bits (79), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N LL P KL+DFG AK S
Sbjct: 121 EIMKSIGEAIQYLHSIN---IAHRDVKPEN-LLYTSKRPNAILKLTDFGFAK----ETTS 172
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 173 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 215
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 35.0 bits (79), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N+L P KL+DFG AK +
Sbjct: 135 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK--ETTSHN 188
Query: 112 HVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
++T Y Y APE + D++S GV+ L+ G
Sbjct: 189 SLTTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 229
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 13/103 (12%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP----KLSDFGLAKLGPVGDKS 111
+I + ++YLH + +RD K N+L P KL+DFG AK S
Sbjct: 120 EIMKSIGEAIQYLHSIN---IAHRDVKPENLLYTSK-RPNAILKLTDFGFAK----ETTS 171
Query: 112 HVS-TRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
H S T T Y APE + D++S GV+ L+ G
Sbjct: 172 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 214
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ L Y HD +I+RD K +LL E KL FG+A +G+ V+ +G
Sbjct: 143 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVAGGRVG 197
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + APE DV+ GV+ L++G
Sbjct: 198 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 231
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 34.7 bits (78), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 45/100 (45%), Gaps = 10/100 (10%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILLEEGFHP--KLSDFGLAKLGPVGDKSHV 113
K A + L+ LH +I+ D K NILL++ K+ DFG + V
Sbjct: 204 KFAHSILQCLDALHKNR---IIHCDLKPENILLKQQGRSGIKVIDFG----SSCYEHQRV 256
Query: 114 STRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ + Y APE + + + D++S G + EL+TG
Sbjct: 257 YXXIQSRF-YRAPEVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 45/113 (39%), Gaps = 19/113 (16%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL-----EEGFHPKLS---------DFGL 101
K+A K + +LH + + D K NIL E ++PK+ D +
Sbjct: 122 KMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 102 AKLGPVG-DKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
G D H ST V T Y APE + + DV+S G + +E G
Sbjct: 179 VDFGSATYDDEHHSTLV-STRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 8/94 (8%)
Query: 63 KGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSHVSTRVMG 119
+ L Y HD +I+RD K +LL E KL FG+A +G+ V+ +G
Sbjct: 141 EALRYCHDNN---IIHRDVKPHCVLLASKENSAPVKLGGFGVAI--QLGESGLVAGGRVG 195
Query: 120 TYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
T + APE DV+ GV+ L++G
Sbjct: 196 TPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 61/132 (46%), Gaps = 15/132 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIYRD-FKS 83
L+ +MP GSL + LH+ +D + +K A A+G+ +LH P+I R S
Sbjct: 86 LITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLHTLE--PLIPRHALNS 141
Query: 84 SNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVK---SDV 140
+++++E ++S +A + S S M + APE +D+
Sbjct: 142 RSVMIDEDMTARIS---MADV----KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADM 194
Query: 141 YSFGVVFLELIT 152
+SF V+ EL+T
Sbjct: 195 WSFAVLLWELVT 206
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSH 112
+I +++LH + +RD K N+L E+ KL+DFG AK ++
Sbjct: 113 EIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 166
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ T Y Y APE + D++S GV+ L+ G
Sbjct: 167 LQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 33.5 bits (75), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL---EEGFHPKLSDFGLAKLGPVGDKSH 112
+I +++LH + +RD K N+L E+ KL+DFG AK ++
Sbjct: 132 EIMRDIGTAIQFLHSHN---IAHRDVKPENLLYTSKEKDAVLKLTDFGFAK---ETTQNA 185
Query: 113 VSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
+ T Y Y APE + D++S GV+ L+ G
Sbjct: 186 LQTPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH---VSTRVMGT 120
GL Y+H +++RD K++N+L+ KL+DFGLA+ + S RV+ T
Sbjct: 137 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 121 YGYCAPEYAM 130
Y PE +
Sbjct: 193 LWYRPPELLL 202
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 194
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 195
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 179
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 120 LEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 175
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 195
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 180
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH---VSTRVMGT 120
GL Y+H +++RD K++N+L+ KL+DFGLA+ + S RV+ T
Sbjct: 137 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 121 YGYCAPEYAM 130
Y PE +
Sbjct: 193 LWYRPPELLL 202
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 124 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 179
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 210
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 123 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 178
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 179 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 209
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 207
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 214
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 245
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 139 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 194
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 225
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 42/93 (45%), Gaps = 10/93 (10%)
Query: 77 IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTV 136
++RD K NILL+ H +L+DFG + L D + S +GT Y +PE
Sbjct: 184 VHRDIKPDNILLDRCGHIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGP 242
Query: 137 -------KSDVYSFGVVFLELITGRKAI--DST 160
+ D ++ GV E+ G+ DST
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADST 275
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 140 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 195
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 226
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 172 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 227
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 228 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 258
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 222
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 180
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 207
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 208
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 175
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 11/96 (11%)
Query: 61 AAKGLEYLHDKANPPVIYRDFKSSNIL--LEEGFHPKLSDFGLAKLGPVGDKSHVSTRVM 118
+++ H + V++RD K NIL L G KL DFG L + D+ + T
Sbjct: 148 VVAAIQHCHSRG---VVHRDIKDENILIDLRRGCA-KLIDFGSGAL--LHDEPY--TDFD 199
Query: 119 GTYGYCAPEYAMTGQL-TVKSDVYSFGVVFLELITG 153
GT Y PE+ Q + + V+S G++ +++ G
Sbjct: 200 GTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCG 235
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 207
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH---VSTRVMGT 120
GL Y+H +++RD K++N+L+ KL+DFGLA+ + S RV+ T
Sbjct: 137 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 192
Query: 121 YGYCAPEYAM 130
Y PE +
Sbjct: 193 LWYRPPELLL 202
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 45/113 (39%), Gaps = 19/113 (16%)
Query: 56 KIAAGAAKGLEYLHDKANPPVIYRDFKSSNILL-----EEGFHPKLS---------DFGL 101
K+A K + +LH + + D K NIL E ++PK+ D +
Sbjct: 122 KMAYQICKSVNFLHSNK---LTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKV 178
Query: 102 AKLGPVG-DKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITG 153
G D H ST V + Y APE + + DV+S G + +E G
Sbjct: 179 VDFGSATYDDEHHSTLVXXRH-YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 120 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 175
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 206
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 222
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 208
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 208
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 153 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 208
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 209 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 239
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 152 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 207
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 208 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.1 bits (74), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 64 GLEYLHDKANPPVIYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSH---VSTRVMGT 120
GL Y+H +++RD K++N+L+ KL+DFGLA+ + S RV+ T
Sbjct: 136 GLYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVV-T 191
Query: 121 YGYCAPEYAM 130
Y PE +
Sbjct: 192 LWYRPPELLL 201
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 167 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 222
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 223 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 253
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 125 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 180
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 211
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 6/91 (6%)
Query: 65 LEYLHDKANPPVIYRDFKSSNILLEEGF-HPKLSDFGLAKLGPVGDKSHVSTRVMGTYGY 123
LE + N V++RD K NIL++ KL DFG L K V T GT Y
Sbjct: 147 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL----KDTVYTDFDGTRVY 202
Query: 124 CAPEYAMTGQLTVKS-DVYSFGVVFLELITG 153
PE+ + +S V+S G++ +++ G
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCG 233
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 31.6 bits (70), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKE--ALDWNTRMKIAAGAAKGLEYLHDKANP--PVIYRD 80
LV+E L +L+DL + + N K A L +L A P +I+ D
Sbjct: 114 LVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---ATPELSIIHCD 165
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDV 140
K NILL +PK S + G + + + Y +PE + + D+
Sbjct: 166 LKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDM 222
Query: 141 YSFGVVFLELITG 153
+S G + +E+ TG
Sbjct: 223 WSLGCILVEMHTG 235
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 31.2 bits (69), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 55/133 (41%), Gaps = 15/133 (11%)
Query: 25 LVYEFMPLGSLEDHLHDLPPDKE--ALDWNTRMKIAAGAAKGLEYLHDKANP--PVIYRD 80
LV+E L +L+DL + + N K A L +L A P +I+ D
Sbjct: 133 LVFEM-----LSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL---ATPELSIIHCD 184
Query: 81 FKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDV 140
K NILL +PK S + G + + + Y +PE + + D+
Sbjct: 185 LKPENILL---CNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDM 241
Query: 141 YSFGVVFLELITG 153
+S G + +E+ TG
Sbjct: 242 WSLGCILVEMHTG 254
>pdb|2JFE|X Chain X, The Crystal Structure Of Human Cytosolic Beta-Glucosidase
Length = 469
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 32 LGSLEDHLHDLPPDKEALDWNTRMKIAAGAAKGLEYLHDKANPPVIY 78
LG L+D + PD ++ + + G K L+Y+ D N PVIY
Sbjct: 324 LGILQDAEIEFFPDPSWINVDWIYVVPWGVCKLLKYIKDTYNNPVIY 370
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.136 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,240,921
Number of Sequences: 62578
Number of extensions: 447826
Number of successful extensions: 2492
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 220
Number of HSP's that attempted gapping in prelim test: 880
Number of HSP's gapped (non-prelim): 1029
length of query: 325
length of database: 14,973,337
effective HSP length: 99
effective length of query: 226
effective length of database: 8,778,115
effective search space: 1983853990
effective search space used: 1983853990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 51 (24.3 bits)