BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020526
(325 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3MN5|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 359
Score = 209 bits (531), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 138/367 (37%), Positives = 180/367 (49%), Gaps = 58/367 (15%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFI 62
A V D GS L+KAG A D AP V PS + RV ++ S TL P+ G I
Sbjct: 7 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRVGDEAQSKRGILTLKY-----PIEHGII 60
Query: 63 RDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSS 122
+WD ME + HH Y L +L PL +PKA RE++ Q+MFETFN+ Y +
Sbjct: 61 TNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMFETFNVPAMYVA 119
Query: 123 EQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------------------ 163
QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 120 IQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTE 179
Query: 164 ------------------------RFEVGDELAYEKTQKSCEIEQHTLPDGQVIRIGKER 199
+ +E+A + S E + + LPDGQVI IG ER
Sbjct: 180 RGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELPDGQVITIGNER 238
Query: 200 YTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQ 259
+ E LFQPS +G+E+ GI E ++I + + L N V+ GGTT G DR Q
Sbjct: 239 FRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQ 298
Query: 260 KE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGPS 318
KE L S ++ ++ PPE YS WIGG+ILA + Q ITK +YDE+GPS
Sbjct: 299 KEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWITKQEYDEAGPS 352
Query: 319 VVHRKCF 325
+VHRKCF
Sbjct: 353 IVHRKCF 359
>pdb|1C0F|A Chain A, Crystal Structure Of Dictyostelium Caatp-Actin In Complex
With Gelsolin Segment 1
Length = 368
Score = 206 bits (524), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 184/372 (49%), Gaps = 55/372 (14%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSV--DNSTLVEDVTV--DP 56
++A V+D GS + KAG A D AP V PS + R G S D + + P
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGKDSYVGDEAQSKRGILTLKYP 63
Query: 57 VVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNI 116
+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MFETFN
Sbjct: 64 IEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNT 122
Query: 117 SGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IASRRF---- 165
Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A R
Sbjct: 123 PAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYM 182
Query: 166 ---------------------EVGDELAYEKTQKSCEIE----------QHTLPDGQVIR 194
++ ++LAY E++ + LPDGQVI
Sbjct: 183 MKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYELPDGQVIT 242
Query: 195 IGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGF 254
IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GGTT G
Sbjct: 243 IGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGTTMFPGI 302
Query: 255 EDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYD 313
DR KE L S ++ ++ PPE YS WIGG+ILA + Q I+K +YD
Sbjct: 303 ADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWISKEEYD 356
Query: 314 ESGPSVVHRKCF 325
ESGPS+VHRKCF
Sbjct: 357 ESGPSIVHRKCF 368
>pdb|4EFH|A Chain A, Acanthamoeba Actin Complex With Spir Domain D
Length = 375
Score = 205 bits (522), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 144/379 (37%), Positives = 185/379 (48%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVG 168
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAG 182
Query: 169 DEL-----------AYEKT------------QKSC------EIEQHT------------L 187
+L Y T +K C E E HT L
Sbjct: 183 RDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMQKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|2OAN|A Chain A, Structure Of Oxidized Beta-Actin
pdb|2OAN|B Chain B, Structure Of Oxidized Beta-Actin
pdb|2OAN|C Chain C, Structure Of Oxidized Beta-Actin
pdb|2OAN|D Chain D, Structure Of Oxidized Beta-Actin
Length = 375
Score = 205 bits (521), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 183/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESXGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>pdb|3U4L|A Chain A, Cryocooled Bovine Profilin:actin Crystal Structure To 2.4
A
Length = 375
Score = 204 bits (519), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 183/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>pdb|3BYH|A Chain A, Model Of Actin-Fimbrin Abd2 Complex
pdb|3LUE|A Chain A, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|B Chain B, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|C Chain C, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|D Chain D, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|E Chain E, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|F Chain F, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|G Chain G, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|H Chain H, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|I Chain I, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3LUE|J Chain J, Model Of Alpha-Actinin Ch1 Bound To F-Actin
pdb|3J0S|A Chain A, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|B Chain B, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|C Chain C, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|D Chain D, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|E Chain E, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|F Chain F, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|G Chain G, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|H Chain H, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|I Chain I, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|J Chain J, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|K Chain K, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3J0S|L Chain L, Remodeling Of Actin Filaments By Adf Cofilin Proteins
pdb|3UB5|A Chain A, Profilin:actin With A Wide Open Nucleotide Cleft
Length = 374
Score = 204 bits (519), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 183/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 6 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 64
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 65 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 123
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 124 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 183
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 184 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 243
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 244 GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 303
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 304 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 357
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 358 KQEYDESGPSIVHRKCF 374
>pdb|2BTF|A Chain A, The Structure Of Crystalline Profilin-Beta-Actin
pdb|1HLU|A Chain A, Structure Of Bovine Beta-Actin-Profilin Complex With Actin
Bound Atp Phosphates Solvent Accessible
Length = 375
Score = 204 bits (519), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 183/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>pdb|3A5M|C Chain C, Crystal Structure Of A Dictyostelium P109i Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5O|C Chain C, Crystal Structure Of A Dictyostelium P109i Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 204 bits (518), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 188/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ + +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAILNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY + S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|1LCU|A Chain A, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
pdb|1LCU|B Chain B, Polylysine Induces An Antiparallel Actin Dimer That
Nucleates Filament Assembly: Crystal Structure At 3.5 A
Resolution
Length = 371
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 138/378 (36%), Positives = 182/378 (48%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKR--------VLEDGSSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R V+ G S V + + +
Sbjct: 3 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVVMGQGDSYVGDEAQSKRGIL 61
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 62 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 120
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 121 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 180
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 181 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 239
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 240 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 299
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 300 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 353
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 354 TKQEYDEAGPSIVHRKCF 371
>pdb|1D4X|A Chain A, Crystal Structure Of Caenorhabditis Elegans Mg-Atp Actin
Complexed With Human Gelsolin Segment 1 At 1.75 A
Resolution
Length = 375
Score = 202 bits (515), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 183/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGVVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 184
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 185 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI +G ER+ EA+FQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 245 GQVITVGNERFRCPEAMFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>pdb|3A5L|C Chain C, Crystal Structure Of A Dictyostelium P109a Mg2+-Actin In
Complex With Human Gelsolin Segment 1
pdb|3A5N|C Chain C, Crystal Structure Of A Dictyostelium P109a Ca2+-Actin In
Complex With Human Gelsolin Segment 1
Length = 375
Score = 202 bits (515), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 187/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAALNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY + S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAAAAIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|3CI5|A Chain A, Complex Of Phosphorylated Dictyostelium Discoideum Actin
With Gelsolin
Length = 375
Score = 202 bits (514), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 187/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSXVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY + S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|1DEJ|A Chain A, Crystal Structure Of A DictyosteliumTETRAHYMENA CHIMERA
Actin (Mutant 646: Q228kT229AA230YA231KS232EE360H) IN
Complex With Human Gelsolin Segment 1
Length = 375
Score = 202 bits (513), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 189/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY + ++S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYKESSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKHEYDESGPSIVHRKCF 375
>pdb|3CHW|A Chain A, Complex Of Dictyostelium Discoideum Actin With Profilin
And The Last Poly-Pro Of Human Vasp
pdb|3CIP|A Chain A, Complex Of Dictyostelium Discoideum Actin With Gelsolin
Length = 375
Score = 201 bits (512), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 187/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY + S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|1C0G|A Chain A, Crystal Structure Of 1:1 Complex Between Gelsolin Segment
1 And A DictyosteliumTETRAHYMENA CHIMERA ACTIN (MUTANT
228: Q228kT229AA230YE360H)
Length = 375
Score = 201 bits (512), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 138/379 (36%), Positives = 185/379 (48%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEXGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAYEKTQKSCEIEQHT----------L 187
R ++ ++LAY E++ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMKAYASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKHEYDESGPSIVHRKCF 375
>pdb|2HF3|A Chain A, Crystal Structure Of Monomeric Actin In The Adp Bound
State
pdb|2HF4|A Chain A, Crystal Structure Of Monomeric Actin In Its Atp-Bound
State
pdb|3MN7|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN9|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MMV|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|A Chain A, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|F Chain F, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
pdb|3MN6|K Chain K, Structures Of Actin-Bound Wh2 Domains Of Spire And The
Implication For Filament Nucleation
Length = 374
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 182/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 6 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 64
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 65 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 123
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 124 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 183
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + L D
Sbjct: 184 LTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKD 243
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+EA GI E ++I + + L NTVL GGTT
Sbjct: 244 GQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 303
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 304 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 357
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 358 KQEYDESGPSIVHRKCF 374
>pdb|1YVN|A Chain A, The Yeast Actin Val 159 Asn Mutant Complex With Human
Gelsolin Segment 1
Length = 375
Score = 201 bits (511), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 187/377 (49%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V+D GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MF
Sbjct: 66 TLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG---------------- 155
ETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G
Sbjct: 125 ETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRD 184
Query: 156 ---AVQHIASRR-------------FEVGDELAY---------EKTQKSCEIEQ-HTLPD 189
+ I S R ++ ++L Y + +S IE+ + LPD
Sbjct: 185 LTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALF PS+LGLE+ GI + ++I + ++L N V+ GGTT
Sbjct: 245 GQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G +R QKE L S+++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MFPGIAERMQKEITALAPSSMKVKIIAPPERK------YSVWIGGSILASLTTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VH KCF
Sbjct: 359 KQEYDESGPSIVHHKCF 375
>pdb|3EKS|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EKU|A Chain A, Crystal Structure Of Monomeric Actin Bound To Cytochalasin
D
pdb|3EL2|A Chain A, Crystal Structure Of Monomeric Actin Bound To Ca-Atp
Length = 375
Score = 201 bits (511), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 142/377 (37%), Positives = 182/377 (48%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 125 ETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRD 184
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + L D
Sbjct: 185 LTDYLMKILTERGYSFTTTEEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELKD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+EA GI E ++I + + L NTVL GGTT
Sbjct: 245 GQVITIGNERFRCPEALFQPSFLGMEACGIHETTYNSIMKCDVDIRKDLYANTVLSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VHRKCF
Sbjct: 359 KQEYDESGPSIVHRKCF 375
>pdb|1NLV|A Chain A, Crystal Structure Of Dictyostelium Discoideum Actin
Complexed With Ca Atp And Human Gelsolin Segment 1
pdb|1NM1|A Chain A, Crystal Structure Of D. Dicsoideum Actin Complexed With
Gelsolin Segment 1 And Mg Atp At 1.8 A Resolution
pdb|1NMD|A Chain A, Crystal Structure Of D. Discoideum Actin-Gelsolin Segment
1 Complex Crystallized In Presence Of Lithium Atp
Length = 375
Score = 201 bits (510), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 139/379 (36%), Positives = 186/379 (49%), Gaps = 62/379 (16%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDV 52
++A V+D GS + KAG A D AP V PS + R G S V + +
Sbjct: 5 VQALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRG 63
Query: 53 TVD---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQL 109
+ P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+
Sbjct: 64 ILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQI 122
Query: 110 MFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQH------IAS 162
MFETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H +A
Sbjct: 123 MFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAG 182
Query: 163 RRF-------------------------EVGDELAY---------EKTQKSCEIEQ-HTL 187
R ++ ++LAY S +E+ + L
Sbjct: 183 RDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMATAASSSALEKSYEL 242
Query: 188 PDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGG 247
PDGQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L N VL GG
Sbjct: 243 PDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 302
Query: 248 TTSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306
TT G DR KE L S ++ ++ PPE YS WIGG+ILA + Q
Sbjct: 303 TTMFPGIADRMNKELTALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMW 356
Query: 307 ITKADYDESGPSVVHRKCF 325
I+K +YDESGPS+VHRKCF
Sbjct: 357 ISKEEYDESGPSIVHRKCF 375
>pdb|1YAG|A Chain A, Structure Of The Yeast Actin-human Gelsolin Segment 1
Complex
Length = 375
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 134/377 (35%), Positives = 187/377 (49%), Gaps = 62/377 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V+D GS + KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MF
Sbjct: 66 TLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG---------------- 155
ETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G
Sbjct: 125 ETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRD 184
Query: 156 ---AVQHIASRR-------------FEVGDELAY---------EKTQKSCEIEQ-HTLPD 189
+ I S R ++ ++L Y + +S IE+ + LPD
Sbjct: 185 LTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPD 244
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALF PS+LGLE+ GI + ++I + ++L N V+ GGTT
Sbjct: 245 GQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTT 304
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G +R QKE L S+++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 305 MFPGIAERMQKEITALAPSSMKVKIIAPPERK------YSVWIGGSILASLTTFQQMWIS 358
Query: 309 KADYDESGPSVVHRKCF 325
K +YDESGPS+VH KCF
Sbjct: 359 KQEYDESGPSIVHHKCF 375
>pdb|1T44|A Chain A, Structural Basis Of Actin Sequestration By Thymosin-B4:
Implications For Arp23 ACTIVATION
Length = 370
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 60
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 61 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 119
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 120 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 179
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 180 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 238
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 239 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 298
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 299 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 352
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 353 TKQEYDEAGPSIVHRKCF 370
>pdb|1KXP|A Chain A, Crystal Structure Of Human Vitamin D-binding Protein In
Complex With Skeletal Actin
pdb|1M8Q|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|0 Chain 0, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|1 Chain 1, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|2 Chain 2, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|3 Chain 3, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|4 Chain 4, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|5 Chain 5, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|6 Chain 6, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|7 Chain 7, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|8 Chain 8, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|9 Chain 9, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|V Chain V, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|W Chain W, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|X Chain X, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Y Chain Y, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Z Chain Z, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1H1V|A Chain A, Gelsolin G4-G6ACTIN COMPLEX
pdb|1RDW|X Chain X, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|A Chain A, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|1RFQ|B Chain B, Actin Crystal Dynamics: Structural Implications For
F-Actin Nucleation, Polymerization And Branching
Mediated By The Anti-Parallel Dimer
pdb|2A5X|A Chain A, Crystal Structure Of A Cross-Linked Actin Dimer
pdb|2ASM|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
A
pdb|2ASP|A Chain A, Structure Of Rabbit Actin In Complex With Reidispongiolide
C
pdb|2FF3|B Chain B, Crystal Structure Of Gelsolin Domain 1:n-Wasp V2 Motif
Hybrid In Complex With Actin
pdb|2FF6|A Chain A, Crystal Structure Of Gelsolin Domain 1:ciboulot Domain 2
Hybrid In Complex With Actin
pdb|2Q1N|A Chain A, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q1N|B Chain B, Actin Dimer Cross-Linked Between Residues 41 And 374
pdb|2Q31|A Chain A, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q31|B Chain B, Actin Dimer Cross-linked Between Residues 41 And 374 And
Proteolytically Cleaved By Subtilisin Between Residues
47 And 48.
pdb|2Q36|A Chain A, Actin Dimer Cross-Linked Between Residues 191 And 374 And
Complexed With Kabiramide C
pdb|2Q0R|A Chain A, Structure Of Pectenotoxin-2 Bound To Actin
pdb|3BUZ|B Chain B, Crystal Structure Of Ia-Btad-Actin Complex
pdb|2Y83|O Chain O, Actin Filament Pointed End
pdb|2Y83|P Chain P, Actin Filament Pointed End
pdb|2Y83|Q Chain Q, Actin Filament Pointed End
pdb|2Y83|R Chain R, Actin Filament Pointed End
pdb|2Y83|S Chain S, Actin Filament Pointed End
pdb|2Y83|T Chain T, Actin Filament Pointed End
pdb|3TPQ|A Chain A, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|B Chain B, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|C Chain C, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|D Chain D, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3TPQ|E Chain E, Crystal Structure Of Wild-Type Mal Rpel Domain In Complex
With Five G- Actins
pdb|3SJH|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp- Latrunculin A
pdb|3U8X|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U8X|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-29) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 18-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|A Chain A, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9D|C Chain C, Crystal Structure Of A Chimera Containing The N-Terminal
Domain (Residues 8-24) Of Drosophila Ciboulot And The
C-Terminal Domain (Residues 13-44) Of Bovine
Thymosin-Beta4, Bound To G-Actin-Atp
pdb|3U9Z|A Chain A, Crystal Structure Between Actin And A Protein Construct
Containing The First Beta-Thymosin Domain Of Drosophila
Ciboulot (Residues 2-58) With The Three Mutations
N26dQ27KD28S
pdb|3UE5|A Chain A, Ecp-Cleaved Actin In Complex With Spir Domain D
pdb|4GY2|B Chain B, Crystal Structure Of Apo-ia-actin Complex
pdb|4H0T|B Chain B, Crystal Structure Of Ia-adpr-actin Complex
pdb|4H0V|B Chain B, Crystal Structure Of Nad+-ia(e378s)-actin Complex
pdb|4H0X|B Chain B, Crystal Structure Of Nad+-ia(e380a)-actin Complex
pdb|4H0Y|B Chain B, Crystal Structure Of Nad+-ia(e380s)-actin Complex
Length = 375
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 125 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 184
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 185 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 243
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 357
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 358 TKQEYDEAGPSIVHRKCF 375
>pdb|4B1V|A Chain A, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1V|B Chain B, Structure Of The Phactr1 Rpel-N Domain Bound To G-Actin
pdb|4B1Z|A Chain A, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|B Chain B, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|C Chain C, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|D Chain D, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|E Chain E, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
pdb|4B1Z|F Chain F, Structure Of The Phactr1 Rpel Domain Bound To G-Actin
Length = 376
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 8 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 67 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 125
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 126 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 185
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 186 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 244
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 358
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 359 TKQEYDEAGPSIVHRKCF 376
>pdb|1IJJ|A Chain A, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1IJJ|B Chain B, The X-Ray Crystal Structure Of The Complex Between Rabbit
Skeletal Muscle Actin And Latrunculin A At 2.85 A
Resolution
pdb|1P8Z|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Residues Val26-Glu156
pdb|1SQK|A Chain A, Crystal Structure Of Ciboulot In Complex With Skeletal
Actin
pdb|1RGI|A Chain A, Crystal Structure Of Gelsolin Domains G1-G3 Bound To Actin
pdb|3CJB|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Gelsolin-Segment 1
pdb|3CJC|A Chain A, Actin Dimer Cross-Linked By V. Cholerae Martx Toxin And
Complexed With Dnase I And Gelsolin-Segment 1
pdb|3B5U|A Chain A, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|B Chain B, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|C Chain C, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|D Chain D, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|E Chain E, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|F Chain F, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|G Chain G, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|H Chain H, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|I Chain I, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|J Chain J, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|K Chain K, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|L Chain L, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|M Chain M, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B5U|N Chain N, Actin Filament Model From Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3DAW|A Chain A, Structure Of The Actin-Depolymerizing Factor Homology
Domain In Complex With Actin
pdb|2V51|B Chain B, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V51|D Chain D, Structure Of Mal-Rpel1 Complexed To Actin
pdb|2V52|B Chain B, Structure Of Mal-Rpel2 Complexed To G-Actin
pdb|2VYP|A Chain A, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|2VYP|B Chain B, Rabbit-Muscle G-Actin In Complex With Myxobacterial
Rhizopodin
pdb|3FFK|B Chain B, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|3FFK|E Chain E, Crystal Structure Of Human Gelsolin Domains G1-G3 Bound To
Actin
pdb|2YJE|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJE|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|A Chain A, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|B Chain B, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|C Chain C, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|D Chain D, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|2YJF|E Chain E, Oligomeric Assembly Of Actin Bound To Mrtf-A
pdb|3TU5|A Chain A, Actin Complex With Gelsolin Segment 1 Fused To Cobl
Segment
pdb|4EAH|D Chain D, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|H Chain H, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|G Chain G, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
pdb|4EAH|F Chain F, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3
Bound To Actin
Length = 377
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 67
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 68 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 126
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 186
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 187 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 245
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 246 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 305
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 306 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 359
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 360 TKQEYDEAGPSIVHRKCF 377
>pdb|2GWJ|A Chain A, Spvb Adp-Ribosylated Actin: Hexagonal Crystal Form
pdb|2GWK|A Chain A, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
pdb|2GWK|B Chain B, Spvb Adp-Ribosylated Actin: Orthorhombic Crystal Form
Length = 371
Score = 199 bits (507), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 3 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 61
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 62 TLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 120
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 121 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 180
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 181 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 239
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 240 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 299
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 300 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 353
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 354 TKQEYDEAGPSIVHRKCF 371
>pdb|1EQY|A Chain A, Complex Between Rabbit Muscle Alpha-Actin: Human Gelsolin
Domain 1
pdb|1ESV|A Chain A, Complex Between Latrunculin A:rabbit Muscle Alpha
Actin:human Gelsolin Domain 1
pdb|1MDU|B Chain B, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|1MDU|E Chain E, Crystal Structure Of The Chicken Actin Trimer Complexed
With Human Gelsolin Segment 1 (Gs-1)
pdb|2PBD|A Chain A, Ternary Complex Of Profilin-Actin With The Poly-Pro-Gab
Domain Of Vasp
Length = 377
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 9 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 67
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 68 TLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 126
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 127 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 186
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 187 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 245
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 246 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 305
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 306 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 359
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 360 TKQEYDEAGPSIVHRKCF 377
>pdb|3G37|O Chain O, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|P Chain P, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Q Chain Q, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|R Chain R, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|S Chain S, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|T Chain T, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|U Chain U, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|V Chain V, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|W Chain W, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|X Chain X, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Y Chain Y, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
pdb|3G37|Z Chain Z, Cryo-Em Structure Of Actin Filament In The Presence Of
Phosphate
Length = 376
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 8 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 67 TLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 125
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 126 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 185
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 186 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 244
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 358
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 359 TKQEYDEAGPSIVHRKCF 376
>pdb|1QZ5|A Chain A, Structure Of Rabbit Actin In Complex With Kabiramide C
pdb|1QZ6|A Chain A, Structure Of Rabbit Actin In Complex With Jaspisamide A
pdb|1S22|A Chain A, Absolute Stereochemistry Of Ulapualide A
pdb|1Y64|A Chain A, Bni1p Formin Homology 2 Domain Complexed With Atp-actin
pdb|1YXQ|A Chain A, Crystal Structure Of Actin In Complex With Swinholide A
pdb|1YXQ|B Chain B, Crystal Structure Of Actin In Complex With Swinholide A
pdb|2A3Z|A Chain A, Ternary Complex Of The Wh2 Domain Of Wasp With Actin-Dnase
I
pdb|2A40|A Chain A, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A40|D Chain D, Ternary Complex Of The Wh2 Domain Of Wave With Actin-Dnase
I
pdb|2A41|A Chain A, Ternary Complex Of The Wh2 Domain Of Wip With Actin-Dnase
I
pdb|2A42|A Chain A, Actin-Dnase I Complex
pdb|2ASO|A Chain A, Structure Of Rabbit Actin In Complex With Sphinxolide B
pdb|1WUA|A Chain A, The Structure Of Aplyronine A-Actin Complex
pdb|2FXU|A Chain A, X-Ray Structure Of Bistramide A- Actin Complex At 1.35 A
Resolution.
pdb|2D1K|A Chain A, Ternary Complex Of The Wh2 Domain Of Mim With Actin-Dnase
I
pdb|2HMP|A Chain A, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2HMP|B Chain B, Uncomplexed Actin Cleaved With Protease Ecp32
pdb|2Q0U|A Chain A, Structure Of Pectenotoxin-2 And Latrunculin B Bound To
Actin
pdb|1J6Z|A Chain A, Uncomplexed Actin
pdb|1LOT|B Chain B, Crystal Structure Of The Complex Of Actin With Vitamin
D-Binding Protein
pdb|1MA9|B Chain B, Crystal Structure Of The Complex Of Human Vitamin D
Binding Protein And Rabbit Muscle Actin
pdb|1NWK|A Chain A, Crystal Structure Of Monomeric Actin In The Atp State
pdb|2Q97|A Chain A, Complex Of Mammalian Actin With Toxofilin From Toxoplasma
Gondii
pdb|2PAV|A Chain A, Ternary Complex Of Profilin-Actin With The Last Poly-Pro
Of Human Vasp
pdb|2VCP|A Chain A, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2VCP|B Chain B, Crystal Structure Of N-wasp Vc Domain In Complex With
Skeletal Actin
pdb|2ZWH|A Chain A, Model For The F-Actin Structure
pdb|3HBT|A Chain A, The Structure Of Native G-Actin
pdb|3M3N|A Chain A, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M3N|B Chain B, Structure Of A Longitudinal Actin Dimer Assembled By
Tandem W Domains
pdb|3M1F|A Chain A, Crosslinked Complex Of Actin With First W Domain Of Vibrio
Parahaemolyticus Vopl
pdb|3MFP|A Chain A, Atomic Model Of F-Actin Based On A 6.6 Angstrom Resolution
Cryoem Map
pdb|4A7F|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7F|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 3)
pdb|4A7H|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7H|G Chain G, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 2)
pdb|4A7L|A Chain A, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|D Chain D, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|E Chain E, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|F Chain F, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7L|I Chain I, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor
Atm 1)
pdb|4A7N|A Chain A, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|B Chain B, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|C Chain C, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|D Chain D, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4A7N|E Chain E, Structure Of Bare F-Actin Filaments Obtained From The Same
Sample As The Actin-Tropomyosin-Myosin Complex
pdb|4H03|B Chain B, Crystal Structure Of Nad+-ia-actin Complex
Length = 375
Score = 199 bits (506), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 180/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEXGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 125 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 184
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 185 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 243
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 357
Query: 308 TKADYDESGPSVVHRKCF 325
TK +YDE+GPS+VHRKCF
Sbjct: 358 TKQEYDEAGPSIVHRKCF 375
>pdb|3W3D|A Chain A, Crystal Structure Of Smooth Muscle G Actin Dnase I Complex
Length = 374
Score = 197 bits (502), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 137/378 (36%), Positives = 179/378 (47%), Gaps = 64/378 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L KAG A D AP V PS + R G S V + + +
Sbjct: 6 ALVCDNGSGLCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 64
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L +L PL +PKA RE++ Q+MF
Sbjct: 65 TLKYPIEXGIITNWDDMEKIWHHSFYNELRVAPEEHPTLLTEAPL-NPKANREKMTQIMF 123
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 124 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 183
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 184 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 242
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N VL GGT
Sbjct: 243 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSGGT 302
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 303 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 356
Query: 308 TKADYDESGPSVVHRKCF 325
+K +YDE+GPS+VHRKCF
Sbjct: 357 SKQEYDEAGPSIVHRKCF 374
>pdb|2W49|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|D Chain D, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|E Chain E, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|F Chain F, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|G Chain G, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|H Chain H, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|I Chain I, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|J Chain J, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|K Chain K, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|L Chain L, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|M Chain M, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|N Chain N, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|O Chain O, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|P Chain P, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|Q Chain Q, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|R Chain R, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|S Chain S, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 372
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 177/375 (47%), Gaps = 64/375 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 125 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 184
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 185 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 243
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 357
Query: 308 TKADYDESGPSVVHR 322
TK +YDE+GPS+VHR
Sbjct: 358 TKQEYDEAGPSIVHR 372
>pdb|1ATN|A Chain A, Atomic Structure Of The Actin:dnase I Complex
Length = 373
Score = 191 bits (485), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 134/375 (35%), Positives = 177/375 (47%), Gaps = 64/375 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 8 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 66
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MF
Sbjct: 67 TLKYPIEXGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMF 125
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 126 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 185
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 186 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 244
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 245 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 304
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 305 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 358
Query: 308 TKADYDESGPSVVHR 322
TK +YDE+GPS+VHR
Sbjct: 359 TKQEYDEAGPSIVHR 373
>pdb|3B63|L Chain L, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|M Chain M, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 191 bits (484), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 137/372 (36%), Positives = 178/372 (47%), Gaps = 62/372 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A VVD GS + KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 60
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PKA RE++ Q+MF
Sbjct: 61 TLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMF 119
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASRRFEVGDE 170
ETFN Y + QAVLSLYA GR +G +D G G P+ EG A+ H R G +
Sbjct: 120 ETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRD 179
Query: 171 L-----------AYEKT------------QKSCEI------------------EQHTLPD 189
L Y T +K C + + + LPD
Sbjct: 180 LTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPD 239
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALFQPS LG+E+ GI E ++I + + L NTVL GGTT
Sbjct: 240 GQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLSGGTT 299
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 300 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIS 353
Query: 309 KADYDESGPSVV 320
K +YDESGPS+V
Sbjct: 354 KQEYDESGPSIV 365
>pdb|3B63|A Chain A, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|G Chain G, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 183/372 (49%), Gaps = 62/372 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V+D GS + KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGIL 60
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MF
Sbjct: 61 TLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMF 119
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG---------------- 155
ETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G
Sbjct: 120 ETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGNTHVVPIYAGFSLPHAILRIDLAGRD 179
Query: 156 ---AVQHIASRR-------------FEVGDELAY---------EKTQKSCEIEQ-HTLPD 189
+ I S R ++ ++L Y + +S IE+ + LPD
Sbjct: 180 LTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPD 239
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALF PS+LGLE+ GI + ++I + ++L N V+ GGTT
Sbjct: 240 GQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTT 299
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G +R QKE L S+++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 300 MFPGIAERMQKEITALAPSSMKVKIIAPPERK------YSVWIGGSILASLTTFQQMWIS 353
Query: 309 KADYDESGPSVV 320
K +YDESGPS+V
Sbjct: 354 KQEYDESGPSIV 365
>pdb|3M6G|A Chain A, Crystal Structure Of Actin In Complex With Lobophorolide
pdb|3M6G|B Chain B, Crystal Structure Of Actin In Complex With Lobophorolide
Length = 371
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/374 (35%), Positives = 176/374 (47%), Gaps = 64/374 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 7 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 65
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MF
Sbjct: 66 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMF 124
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 125 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 184
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 185 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 243
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 244 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 303
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 304 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 357
Query: 308 TKADYDESGPSVVH 321
TK +YDE+GPS+VH
Sbjct: 358 TKQEYDEAGPSIVH 371
>pdb|3B63|C Chain C, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|I Chain I, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 189 bits (479), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/372 (34%), Positives = 183/372 (49%), Gaps = 62/372 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V+D GS + KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVIDNGSGMCKAGFA-GDDAPRAVFPSIVGRPRHQGIMVGMGQKDSYVGDEAQSKRGIL 60
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G + +WD ME + HH Y L E +L T+ +PK+ RE++ Q+MF
Sbjct: 61 TLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPMNPKSNREKMTQIMF 119
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG---------------- 155
ETFN+ FY S QAVLSLY+ GR +G +D G G + P+ G
Sbjct: 120 ETFNVPAFYVSIQAVLSLYSSGRTTGIVLDSGDGVTHVVPIYAGFSLPHAILRIDLAGRD 179
Query: 156 ---AVQHIASRR-------------FEVGDELAY---------EKTQKSCEIEQ-HTLPD 189
+ I S R ++ ++L Y + +S IE+ + LPD
Sbjct: 180 LTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPD 239
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ EALF PS+LGLE+ GI + ++I + ++L N V+ GGTT
Sbjct: 240 GQVITIGNERFRAPEALFHPSVLGLESAGIDQTTYNSIMKCDVDVRKELYGNIVMSGGTT 299
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G +R QKE L S+++ ++ PPE YS WIGG+ILA + Q I+
Sbjct: 300 MFPGIAERMQKEITALAPSSMKVKIIAPPERK------YSVWIGGSILASLTTFQQMWIS 353
Query: 309 KADYDESGPSVV 320
K +YDESGPS+V
Sbjct: 354 KQEYDESGPSIV 365
>pdb|3B63|B Chain B, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 364
Score = 186 bits (473), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 132/372 (35%), Positives = 176/372 (47%), Gaps = 63/372 (16%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVED--V 52
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 60
Query: 53 TVDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFE 112
T+ + G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MFE
Sbjct: 61 TLKYPIEGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMFE 119
Query: 113 TFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR-------- 163
TFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 120 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 179
Query: 164 ----------------------------------RFEVGDELAYEKTQKSCEIEQHTLPD 189
+ +E+A + S E + + LPD
Sbjct: 180 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELPD 238
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGTT
Sbjct: 239 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTT 298
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q IT
Sbjct: 299 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIT 352
Query: 309 KADYDESGPSVV 320
K +YDE+GPS+V
Sbjct: 353 KQEYDEAGPSIV 364
>pdb|3B63|E Chain E, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|H Chain H, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|J Chain J, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|K Chain K, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
pdb|3B63|N Chain N, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 365
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 175/373 (46%), Gaps = 64/373 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVEDVTV 54
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 2 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 60
Query: 55 D---PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMF 111
P+ G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MF
Sbjct: 61 TLKYPIEHGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMF 119
Query: 112 ETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR------- 163
ETFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 120 ETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRD 179
Query: 164 -----------------------------------RFEVGDELAYEKTQKSCEIEQHTLP 188
+ +E+A + S E + + LP
Sbjct: 180 LTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELP 238
Query: 189 DGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGT 248
DGQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGT
Sbjct: 239 DGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGT 298
Query: 249 TSMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHI 307
T G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q I
Sbjct: 299 TMYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWI 352
Query: 308 TKADYDESGPSVV 320
TK +YDE+GPS+V
Sbjct: 353 TKQEYDEAGPSIV 365
>pdb|3B63|D Chain D, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 176 bits (447), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 128/366 (34%), Positives = 170/366 (46%), Gaps = 63/366 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVED--V 52
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 1 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 59
Query: 53 TVDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFE 112
T+ + G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MFE
Sbjct: 60 TLKYPIEGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMFE 118
Query: 113 TFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR-------- 163
TFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 119 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 178
Query: 164 ----------------------------------RFEVGDELAYEKTQKSCEIEQHTLPD 189
+ +E+A + S E + + LPD
Sbjct: 179 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELPD 237
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGTT
Sbjct: 238 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTT 297
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q IT
Sbjct: 298 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIT 351
Query: 309 KADYDE 314
K +YDE
Sbjct: 352 KQEYDE 357
>pdb|3B63|F Chain F, Actin Filament Model In The Extended Form Of Acromsomal
Bundle In The Limulus Sperm
Length = 357
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 126/364 (34%), Positives = 168/364 (46%), Gaps = 63/364 (17%)
Query: 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDG--------SSSVDNSTLVED--V 52
A V D GS L+KAG A D AP V PS + R G S V + + +
Sbjct: 3 ALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGIL 61
Query: 53 TVDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFE 112
T+ + G I +WD ME + HH Y L E L T+ +PKA RE++ Q+MFE
Sbjct: 62 TLKYPIEGIITNWDDMEKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMFE 120
Query: 113 TFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEG-AVQHIASR-------- 163
TFN+ Y + QAVLSLYA GR +G +D G G P+ EG A+ H R
Sbjct: 121 TFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 180
Query: 164 ----------------------------------RFEVGDELAYEKTQKSCEIEQHTLPD 189
+ +E+A + S E + + LPD
Sbjct: 181 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLE-KSYELPD 239
Query: 190 GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249
GQVI IG ER+ E LFQPS +G+E+ GI E ++I + + L N V+ GGTT
Sbjct: 240 GQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTT 299
Query: 250 SMTGFEDRFQKE-AGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHIT 308
G DR QKE L S ++ ++ PPE YS WIGG+ILA + Q IT
Sbjct: 300 MYPGIADRMQKEITALAPSTMKIKIIAPPERK------YSVWIGGSILASLSTFQQMWIT 353
Query: 309 KADY 312
K +Y
Sbjct: 354 KQEY 357
>pdb|2P9K|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
Length = 394
Score = 137 bits (346), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 107/393 (27%), Positives = 176/393 (44%), Gaps = 83/393 (21%)
Query: 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVD------ 55
+ V D G+ +K G A P + PS + R + ++ V N + + + D
Sbjct: 7 KVVVCDNGTGFVKCGYA-GSNFPEHIFPSLVGRPIIRSTTKVGNIEIKDLMVGDEASELR 65
Query: 56 -------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGN----EGQILFTDPLCSPKAVRE 104
P+ G +R+WD M+ L + G E+ N +IL T+P +P RE
Sbjct: 66 SMLEVNYPMENGIVRNWDDMKHLWDYTF----GPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 105 QLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRR 164
++V++MFET+ SG Y + QAVL+LYA G ++G VD G G I PV EG +RR
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 165 FEVG--------------------------------DELAY-----EKTQK-----SCEI 182
++ ++L Y E+ QK + +
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 183 EQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENT 242
E +TLPDG++I++G ER+ EALFQP ++ +E G+ E L +TI + + ++
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 243 VLCGGTTSMTGFEDRFQKEAGLCS------------SAIRPTLVKPPEYMPENLTLYSAW 290
VL GG+T G R ++E S + + PP + +
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRK------HMVF 355
Query: 291 IGGAILAKVVFPQ-NQHITKADYDESGPSVVHR 322
+GGA+LA ++ + N +T+ +Y E G V+ +
Sbjct: 356 LGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388
>pdb|1K8K|B Chain B, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|B Chain B, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9L|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|B Chain B, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|B Chain B, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|B Chain B, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|B Chain B, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|B Chain B, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|B Chain B, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|B Chain B, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 394
Score = 136 bits (343), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 106/393 (26%), Positives = 176/393 (44%), Gaps = 83/393 (21%)
Query: 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVD------ 55
+ V D G+ +K G A P + P+ + R + ++ V N + + + D
Sbjct: 7 KVVVCDNGTGFVKCGYA-GSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVGDEASELR 65
Query: 56 -------PVVRGFIRDWDAMEDLLHHVLYAGLGWEEGN----EGQILFTDPLCSPKAVRE 104
P+ G +R+WD M+ L + G E+ N +IL T+P +P RE
Sbjct: 66 SMLEVNYPMENGIVRNWDDMKHLWDYTF----GPEKLNIDTRNCKILLTEPPMNPTKNRE 121
Query: 105 QLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRR 164
++V++MFET+ SG Y + QAVL+LYA G ++G VD G G I PV EG +RR
Sbjct: 122 KIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRR 181
Query: 165 FEVG--------------------------------DELAY-----EKTQK-----SCEI 182
++ ++L Y E+ QK + +
Sbjct: 182 LDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLV 241
Query: 183 EQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENT 242
E +TLPDG++I++G ER+ EALFQP ++ +E G+ E L +TI + + ++
Sbjct: 242 ESYTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHI 301
Query: 243 VLCGGTTSMTGFEDRFQKEAGLCS------------SAIRPTLVKPPEYMPENLTLYSAW 290
VL GG+T G R ++E S + + PP + +
Sbjct: 302 VLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRK------HMVF 355
Query: 291 IGGAILAKVVFPQ-NQHITKADYDESGPSVVHR 322
+GGA+LA ++ + N +T+ +Y E G V+ +
Sbjct: 356 LGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388
>pdb|1K8K|A Chain A, Crystal Structure Of Arp23 COMPLEX
pdb|1TYQ|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ATP AND
Calcium
pdb|1U2V|A Chain A, Crystal Structure Of Arp23 COMPLEX WITH BOUND ADP AND
Calcium
pdb|2P9I|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp And Crosslinked With Gluteraldehyde
pdb|2P9K|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Atp And Crosslinked With Glutaraldehyde
pdb|2P9L|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX
pdb|2P9N|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9P|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Adp
pdb|2P9S|A Chain A, Structure Of Bovine Arp23 COMPLEX CO-Crystallized With
AtpMG2+
pdb|2P9U|A Chain A, Crystal Structure Of Bovine Arp23 COMPLEX CO-Crystallized
With Amp-Pnp And Calcium
pdb|3DXK|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0944636
pdb|3DXM|A Chain A, Structure Of Bos Taurus Arp23 COMPLEX WITH BOUND INHIBITOR
Ck0993548
pdb|3RSE|A Chain A, Structural And Biochemical Characterization Of Two Binding
Sites For Nucleation Promoting Factor Wasp-Vca On Arp23
COMPLEX
pdb|3UKR|A Chain A, Crystal Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-666
pdb|3UKU|A Chain A, Structure Of Arp2/3 Complex With Bound Inhibitor Ck-869
pdb|3ULE|A Chain A, Structure Of Bos Taurus Arp2/3 Complex With Bound
Inhibitor Ck-869 And Atp
Length = 418
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 153/407 (37%), Gaps = 92/407 (22%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPS------------QMKRVLEDGSSSVDNSTL 48
+ A VVD G+ K G A + P +IPS Q +R + G +D
Sbjct: 5 LPACVVDCGTGYTKLGYA-GNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIG 63
Query: 49 VEDV------TVDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAV 102
E + T P+ G + DWD ME + V++ L E + +L PL +P+
Sbjct: 64 DEAIEKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPEN- 122
Query: 103 REQLVQLMFETFNISGFY------SSEQAVLSLYAVGR--ISGCTVDIGHGKIDIAPVIE 154
RE ++MFE+FN+ G Y + A + VG ++G +D G G + PV E
Sbjct: 123 REYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAE 182
Query: 155 GAV--------------------QHIASRRFEVGDELAYEKTQKSCEIEQHTLPD----- 189
G V Q + R + E + E + E + PD
Sbjct: 183 GYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVKEF 242
Query: 190 -----------------------GQVIRIGKERYTVGEALFQPSILGLE-AHGIVEQLVH 225
I +G ER+ E F P + I E +
Sbjct: 243 NKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDE 302
Query: 226 TISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAG------------LCSSAIRPTL 273
I + R L +N VL GG+T F R Q++ L ++P
Sbjct: 303 VIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKP 362
Query: 274 VKPPEYMPENLTLYSAWIGGAILAKVV-FPQNQHITKADYDESGPSV 319
+ + + ++ Y+ W GG++LA F Q H TK DY+E GPS+
Sbjct: 363 ID-VQVITHHMQRYAVWFGGSMLASTPEFYQVCH-TKKDYEEIGPSI 407
>pdb|3DWL|A Chain A, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
pdb|3DWL|B Chain B, Crystal Structure Of Fission Yeast Arp2/3 Complex Lacking
The Arp2 Subunit
Length = 427
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 147/393 (37%), Gaps = 82/393 (20%)
Query: 5 VVDAGSKLLKAGPAIPDQAPSMVIPSQ----MKRVLEDGSSSVDNSTLVE---DVTVD-P 56
V+ S +GPA+ + M KR ED + N L + ++D P
Sbjct: 34 VIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIGNDALKKASAGYSLDYP 93
Query: 57 VVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNI 116
+ G I +WD ME L+ L E + L T+P +P RE ++MFE+FN
Sbjct: 94 IRHGQIENWDHMERFWQQSLFKYLRCEP-EDHYFLLTEPPLNPPENRENTAEIMFESFNC 152
Query: 117 SGFY-------SSEQAVLSLYAVGR-ISGCTVDIGHGKIDIAPVIEGA------------ 156
+G Y + + S R ++G VD G G I PV EG
Sbjct: 153 AGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLA 212
Query: 157 -------VQHIASRRFEVGDEL-AYEKTQKSC---------EIEQHTL-PD--------- 189
VQ + R E L E+ ++ C E + PD
Sbjct: 213 GRDVTYFVQSLLRDRNEPDSSLKTAERIKEECCYVCPDIVKEFSRFDREPDRYLKYASES 272
Query: 190 ----GQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQ-LLENTVL 244
I +G ER+ E F P I + + +LV + S + R+ L +N VL
Sbjct: 273 ITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVL 332
Query: 245 CGGTTSMTGFEDRFQKE---------------AGLCSSAIRPTLVKPPEYMPENLTLYSA 289
GG+T F +R Q++ +G S + ++ +
Sbjct: 333 SGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVIS------HKRQRNAV 386
Query: 290 WIGGAILAKVVFPQNQHITKADYDESGPSVVHR 322
W GG++LA+ + TKADY+E G S+ R
Sbjct: 387 WFGGSLLAQTPEFGSYCHTKADYEEYGASIARR 419
>pdb|3QB0|A Chain A, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|B Chain B, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|C Chain C, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
pdb|3QB0|D Chain D, Crystal Structure Of Actin-Related Protein Arp4 From S.
Cerevisiae Complexed With Atp
Length = 498
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 77/170 (45%), Gaps = 7/170 (4%)
Query: 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQM-KRVLEDGSSSVDNSTLV----EDVTVD 55
+ A V+D GS G + D P ++PS K ++G+ + + + +D +
Sbjct: 23 VSAVVIDPGSYTTNIGYSGSD-FPQSILPSVYGKYTADEGNKKIFSEQSIGIPRKDYELK 81
Query: 56 PVV-RGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETF 114
P++ G + DWD ++ L L + L T+P+ + R++ ++++ E
Sbjct: 82 PIIENGLVIDWDTAQEQWQWALQNELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGM 141
Query: 115 NISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRR 164
Y + + +A GR + VDIGH ++P+++G ++RR
Sbjct: 142 QFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPIVDGMTLSKSTRR 191
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Query: 215 EAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLV 274
E G+ + + +I + + L N VL GGT+S+ G DR E +++ ++
Sbjct: 390 ELIGLADLVYSSIMSSDVDLRATLAHNVVLTGGTSSIPGLSDRLMTELNKILPSLKFRIL 449
Query: 275 KPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESG 316
+ Y +W+GG+IL + + K +Y+E G
Sbjct: 450 TTGHTIERQ---YQSWLGGSILTSLGTFHQLWVGKKEYEEVG 488
>pdb|4I6M|B Chain B, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 439
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 83/412 (20%), Positives = 155/412 (37%), Gaps = 125/412 (30%)
Query: 24 PSMVIPSQMKRVLEDGSSSVDNSTLVEDVT--VDPVVRGFIRDWDAMEDLLHHVLYAGLG 81
P + IP+Q+ R S +ST ++ + P+ G I D A L + + L
Sbjct: 33 PELEIPTQIYRTTRQDGSYTYHSTNKDNKAELIKPIQNGEIIDISAFTQFLRLIFVSILS 92
Query: 82 WEEGNEGQILFTDPLCS-----------PKAVREQLVQLMFETFNISGFYSSEQAVLSLY 130
+ N+ Q F L + ++ E + Q +FE+ I+ ++ + Y
Sbjct: 93 -DRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVFESLEINNLIQLPASLAATY 151
Query: 131 AVGRISGC-TVDIGHGKIDIAPVIEGA-VQHIAS-------------------------- 162
+ + C +D+G DI P+++ A + H+ S
Sbjct: 152 SXISLQNCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPXGGQSINDSLKKLLPQWDDDQIE 211
Query: 163 ------------------RRFEVGDELAYEK--TQKSCEIEQHTLPD--GQVIRIGKERY 200
F+ G+E E T K+ ++E +T D G I++GK+R+
Sbjct: 212 SLKKSPIFEVLSDDAKKLSSFDFGNENEDEDEGTLKNSDLEFNTFWDEKGNEIKVGKQRF 271
Query: 201 TVGEALFQPSILGLEAHGIVEQLVHTISTVSSENH-RQLLENTVLCGGTTSMTGFED--- 256
L + I ++ T+ + N + + EN ++ GGTTS++GF++
Sbjct: 272 QGCNNLIK---------NISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALL 322
Query: 257 -------------------------------RFQKEAGLCSSAIRPT-----------LV 274
+ + + S+A PT L
Sbjct: 323 GQLLKDHLIIEPEEEKSKREEEAKSVLPAATKKKSKFXTNSTAFVPTIEYVQCPTVIKLA 382
Query: 275 KPPEYMPE-NLTLYSA--WIGGAILAKVVF--PQNQ-HITKADYDESGPSVV 320
K P+Y PE + YS ++G I++K +F P++ +IT+ Y+ GP+ +
Sbjct: 383 KYPDYFPEWKKSGYSEIIFLGAQIVSKQIFTHPKDTFYITREKYNXKGPAAL 434
>pdb|4I6M|A Chain A, Structure Of Arp7-arp9-snf2(hsa)-rtt102 Subcomplex Of
Swi/snf Chromatin Remodeler
Length = 477
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 52/116 (44%), Gaps = 4/116 (3%)
Query: 59 RGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPK---AVREQLVQLMFETFN 115
+G +WDA+E + LY E ++ T P + K A+ E+ +L F+ N
Sbjct: 74 QGLPYNWDALEXQWRY-LYDTQLKVSPEELPLVITXPATNGKPDXAILERYYELAFDKLN 132
Query: 116 ISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGDEL 171
+ F + + + G+ S +DIG ++ P+I+G V A R + G +
Sbjct: 133 VPVFQIVIEPLAIALSXGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGGDF 188
>pdb|4FO0|A Chain A, Human Actin-Related Protein Arp8 In Its Atp-Bound State
Length = 593
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 90 ILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDI 149
IL + + + V+E LV ++ SG +++V + Y G S C VD+G K +
Sbjct: 202 ILLIPDIYNKQHVKE-LVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIVDVGDQKTSV 260
Query: 150 APVIEGAVQHIASR 163
+E V H +R
Sbjct: 261 C-CVEDGVSHRNTR 273
>pdb|4AM6|A Chain A, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM6|B Chain B, C-terminal Domain Of Actin-related Protein Arp8 From S.
Cerevisiae
pdb|4AM7|A Chain A, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
pdb|4AM7|B Chain B, Adp-bound C-terminal Domain Of Actin-related Protein Arp8
From S. Cerevisiae
Length = 655
Score = 33.5 bits (75), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 272 TLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGPSVVHRKC 324
+++ PP M L + W G ++LA++ + IT +D+D G ++ KC
Sbjct: 602 SIIPPPRDMNPALII---WKGASVLAQIKLVEELFITNSDWDVHGSRILQYKC 651
>pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3)
pdb|2OWM|B Chain B, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3)
pdb|2OWM|C Chain C, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3)
pdb|2OWM|D Chain D, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3)
Length = 443
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 25/52 (48%)
Query: 274 VKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGPSVVHRKCF 325
+ P +Y TL A I + V Q ++ A+ D PS+VHRKCF
Sbjct: 392 ISPTDYDETLSTLRYADQAKRIRTRAVVNQVDGVSAAERDAQIPSIVHRKCF 443
>pdb|2YYG|A Chain A, Crystal Structure Of The Oxygenase Component (Hpab) Of
4- Hydroxyphenylacetate 3-Monooxygenase
pdb|2YYI|A Chain A, Crystal Structure Of The Oxygenase Component (Hpab) Of
4- Hydroxyphenylacetate 3-Monooxygenase Complexed With
Fad
pdb|2YYJ|A Chain A, Crystal Structure Of The Oxygenase Component (Hpab) Of
4- Hydroxyphenylacetate 3-Monooxygenase Complexed With
Fad And 4- Hydroxyphenylacetate
Length = 481
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 49 VEDVTVDPVVRGFIRDWDAMEDLLHHVLY 77
VED T PV RG +R A+ DL H Y
Sbjct: 26 VEDPTTHPVFRGIVRTMAALYDLQHDPRY 54
>pdb|2YYK|A Chain A, Crystal Structure Of The Mutant Of Hpab (T198i, A276g,
And R466h)
pdb|2YYL|A Chain A, Crystal Structure Of The Mutant Of Hpab (t198i, A276g,
And R466h) Complexed With Fad
pdb|2YYM|A Chain A, Crystal Structure Of The Mutant Of Hpab (T198i, A276g,
And R466h) Complexed With Fad And
4-Hydroxyphenylacetate
Length = 481
Score = 29.6 bits (65), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 49 VEDVTVDPVVRGFIRDWDAMEDLLHHVLY 77
VED T PV RG +R A+ DL H Y
Sbjct: 26 VEDPTTHPVFRGIVRTMAALYDLQHDPRY 54
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 28.9 bits (63), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 164 RFEVGDELAYEKTQKSCEIEQHTLPDGQVIRI 195
RF+VGD +AY E H LP+ ++++
Sbjct: 78 RFKVGDRVAYGTGPLGAYSEVHVLPEANLVKL 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,057,779
Number of Sequences: 62578
Number of extensions: 416705
Number of successful extensions: 994
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 803
Number of HSP's gapped (non-prelim): 106
length of query: 325
length of database: 14,973,337
effective HSP length: 99
effective length of query: 226
effective length of database: 8,778,115
effective search space: 1983853990
effective search space used: 1983853990
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)