Query 020526
Match_columns 325
No_of_seqs 127 out of 1274
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 04:19:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020526.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020526hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dwl_A Actin-related protein 3 100.0 7.1E-76 2.4E-80 555.5 19.2 315 2-325 6-422 (427)
2 3qb0_A Actin-related protein 4 100.0 4.7E-75 1.6E-79 555.1 23.8 314 1-324 23-497 (498)
3 2fxu_A Alpha-actin-1, actin, a 100.0 3E-68 1E-72 498.3 26.3 316 1-325 5-375 (375)
4 4fo0_A Actin-related protein 8 100.0 7E-69 2.4E-73 530.7 19.7 317 2-325 16-590 (593)
5 1k8k_B ARP2, actin-like protei 100.0 8.2E-69 2.8E-73 504.9 9.1 312 2-322 7-388 (394)
6 1k8k_A ARP3, actin-like protei 100.0 1.1E-64 3.9E-69 480.7 23.4 315 1-325 5-413 (418)
7 4am6_A Actin-like protein ARP8 100.0 4.6E-54 1.6E-58 413.6 22.1 282 39-325 157-652 (655)
8 1jce_A ROD shape-determining p 100.0 3.5E-30 1.2E-34 237.7 15.1 274 2-303 4-330 (344)
9 3h1q_A Ethanolamine utilizatio 99.8 4.5E-20 1.6E-24 164.3 11.3 236 3-297 30-272 (272)
10 2v7y_A Chaperone protein DNAK; 99.8 2.8E-18 9.7E-23 165.9 12.9 265 2-298 3-349 (509)
11 3qfu_A 78 kDa glucose-regulate 99.7 3.2E-17 1.1E-21 153.4 14.3 269 3-299 20-392 (394)
12 1dkg_D Molecular chaperone DNA 99.7 7.6E-17 2.6E-21 150.4 11.5 270 1-299 1-381 (383)
13 3i33_A Heat shock-related 70 k 99.7 4.1E-16 1.4E-20 146.5 13.1 270 1-299 23-400 (404)
14 1yuw_A Heat shock cognate 71 k 99.5 7.4E-13 2.5E-17 129.1 16.4 268 2-298 5-378 (554)
15 2kho_A Heat shock protein 70; 99.4 1.5E-12 5.1E-17 128.2 15.6 268 3-299 4-381 (605)
16 3d2f_A Heat shock protein homo 99.4 1.9E-12 6.4E-17 128.7 15.5 269 1-298 2-381 (675)
17 2fsj_A Hypothetical protein TA 99.3 1.4E-12 4.8E-17 119.9 8.5 156 1-168 21-225 (346)
18 4gni_A Putative heat shock pro 99.3 3.7E-12 1.3E-16 119.6 10.1 215 67-300 130-401 (409)
19 2ych_A Competence protein PILM 99.3 3.6E-11 1.2E-15 111.6 14.0 143 109-262 158-330 (377)
20 4b9q_A Chaperone protein DNAK; 99.1 2.5E-10 8.6E-15 112.4 12.3 68 87-155 135-208 (605)
21 4a2a_A Cell division protein F 98.9 8.5E-08 2.9E-12 90.1 17.4 182 101-299 168-393 (419)
22 3js6_A Uncharacterized PARM pr 98.8 2.1E-08 7.1E-13 92.2 9.2 82 87-168 113-217 (355)
23 4apw_A ALP12; actin-like prote 98.6 3.1E-07 1.1E-11 83.5 13.5 157 3-168 9-205 (329)
24 2zgy_A Plasmid segregation pro 98.6 2.5E-08 8.6E-13 90.4 4.2 57 112-168 136-198 (320)
25 4ehu_A Activator of 2-hydroxyi 97.4 0.0039 1.3E-07 54.6 15.0 66 218-298 188-253 (276)
26 1hux_A Activator of (R)-2-hydr 95.7 0.017 5.9E-07 50.4 6.4 48 239-299 209-256 (270)
27 1t6c_A Exopolyphosphatase; alp 95.6 0.034 1.2E-06 49.7 7.9 77 88-168 85-169 (315)
28 3hi0_A Putative exopolyphospha 94.7 0.23 8E-06 47.3 11.3 65 101-168 100-171 (508)
29 3bex_A Type III pantothenate k 94.5 0.31 1.1E-05 41.9 10.8 15 4-18 6-20 (249)
30 2d0o_A DIOL dehydratase-reacti 94.3 0.14 4.8E-06 48.7 8.5 44 123-168 390-438 (610)
31 3mdq_A Exopolyphosphatase; str 93.9 0.11 3.8E-06 46.4 6.8 65 101-168 89-162 (315)
32 1u6z_A Exopolyphosphatase; alp 93.7 0.27 9.1E-06 47.0 9.5 147 2-168 12-168 (513)
33 1nbw_A Glycerol dehydratase re 93.1 0.15 5.2E-06 48.6 6.5 44 123-168 392-440 (607)
34 3aap_A Ectonucleoside triphosp 92.2 1.1 3.7E-05 40.5 10.8 99 65-168 52-175 (353)
35 3cer_A Possible exopolyphospha 91.6 0.35 1.2E-05 43.6 6.8 53 101-154 102-165 (343)
36 3cet_A Conserved archaeal prot 90.9 0.17 5.8E-06 45.2 3.8 26 135-160 127-152 (334)
37 3djc_A Type III pantothenate k 89.3 4 0.00014 35.2 11.2 16 3-18 4-19 (266)
38 2h3g_X Biosynthetic protein; p 86.8 5.1 0.00017 34.6 10.3 15 4-18 3-17 (268)
39 2gup_A ROK family protein; sug 85.7 7.1 0.00024 33.7 10.9 53 105-160 86-143 (292)
40 1zbs_A Hypothetical protein PG 84.2 15 0.00053 31.6 12.4 71 88-159 61-133 (291)
41 2ews_A Pantothenate kinase; PA 83.8 0.66 2.2E-05 40.7 3.2 70 218-297 215-286 (287)
42 3vgl_A Glucokinase; ROK family 82.3 9.8 0.00033 33.4 10.4 52 107-160 89-147 (321)
43 3cj1_A Ectonucleoside triphosp 81.8 1.7 6E-05 40.6 5.4 55 102-156 130-211 (456)
44 3zx3_A Ectonucleoside triphosp 81.7 2.6 8.9E-05 39.3 6.5 90 66-156 89-202 (452)
45 2i7n_A Pantothenate kinase 1; 81.4 1.5 5.3E-05 39.6 4.7 72 218-297 284-358 (360)
46 1zc6_A Probable N-acetylglucos 71.6 45 0.0016 28.7 11.5 128 3-159 13-146 (305)
47 2aa4_A Mannac kinase, putative 71.1 23 0.00077 30.3 9.4 52 106-160 88-146 (289)
48 4htl_A Beta-glucoside kinase; 68.8 3.6 0.00012 35.8 3.7 52 107-160 90-148 (297)
49 4db3_A Glcnac kinase, N-acetyl 67.4 26 0.00088 30.8 9.0 52 107-160 113-171 (327)
50 4db3_A Glcnac kinase, N-acetyl 62.9 4.5 0.00015 35.8 3.1 66 219-297 257-324 (327)
51 2ch5_A NAGK protein; transfera 62.2 80 0.0027 27.5 13.4 82 65-148 49-134 (347)
52 2f9w_A Pantothenate kinase; CO 59.9 40 0.0014 28.9 8.5 15 4-18 26-40 (271)
53 4htl_A Beta-glucoside kinase; 57.1 92 0.0031 26.6 12.0 65 219-298 225-290 (297)
54 2aa4_A Mannac kinase, putative 57.0 4.2 0.00014 35.0 1.8 65 219-297 221-286 (289)
55 2e2o_A Hexokinase; acetate and 56.2 94 0.0032 26.4 11.5 61 89-156 62-123 (299)
56 3qbx_A Anhydro-N-acetylmuramic 52.0 7.6 0.00026 35.1 2.6 23 240-262 285-307 (371)
57 3vov_A Glucokinase, hexokinase 50.4 87 0.003 26.9 9.3 53 107-161 91-150 (302)
58 2gup_A ROK family protein; sug 49.5 3.8 0.00013 35.5 0.2 65 219-298 215-286 (292)
59 1saz_A Probable butyrate kinas 48.7 1.5E+02 0.0051 26.5 12.8 49 241-299 298-348 (381)
60 1saz_A Probable butyrate kinas 48.4 6.2 0.00021 35.8 1.5 56 104-161 110-201 (381)
61 3epq_A Putative fructokinase; 48.1 9.6 0.00033 33.3 2.6 53 107-161 90-149 (302)
62 3vov_A Glucokinase, hexokinase 47.0 7.2 0.00025 34.0 1.7 67 219-298 225-294 (302)
63 3cqy_A Anhydro-N-acetylmuramic 46.8 10 0.00034 34.3 2.5 22 241-262 292-313 (370)
64 2qm1_A Glucokinase; alpha-beta 45.3 7.6 0.00026 34.0 1.6 52 107-160 101-159 (326)
65 3r8e_A Hypothetical sugar kina 44.5 7.3 0.00025 34.3 1.3 51 108-160 111-169 (321)
66 2hoe_A N-acetylglucosamine kin 44.5 12 0.00043 33.6 2.9 51 108-160 182-237 (380)
67 3eno_A Putative O-sialoglycopr 40.6 17 0.00058 32.3 3.1 24 239-262 250-273 (334)
68 2qm1_A Glucokinase; alpha-beta 39.2 62 0.0021 27.9 6.6 67 219-298 250-320 (326)
69 2ivn_A O-sialoglycoprotein end 38.4 17 0.00059 32.1 2.7 24 239-262 245-268 (330)
70 2ap1_A Putative regulator prot 35.4 11 0.00038 33.0 1.0 51 108-160 114-171 (327)
71 3vgl_A Glucokinase; ROK family 35.1 19 0.00065 31.5 2.5 67 219-298 240-311 (321)
72 4g9i_A Hydrogenase maturation 35.0 26 0.0009 35.0 3.7 24 239-262 706-729 (772)
73 2e2o_A Hexokinase; acetate and 31.3 29 0.00098 29.8 3.0 44 241-298 242-286 (299)
74 3o8m_A Hexokinase; rnaseh-like 30.5 2.7E+02 0.0093 25.9 9.6 52 102-153 186-244 (485)
75 3htv_A D-allose kinase, alloki 30.0 29 0.001 30.2 2.8 55 105-161 98-158 (310)
76 2ch5_A NAGK protein; transfera 28.6 28 0.00095 30.6 2.5 71 219-298 245-323 (347)
77 2ap1_A Putative regulator prot 26.5 1.2E+02 0.0042 26.1 6.3 16 3-18 26-41 (327)
78 3r8e_A Hypothetical sugar kina 25.3 1.3E+02 0.0044 26.0 6.2 66 219-297 248-317 (321)
79 2zf5_O Glycerol kinase; hypert 23.8 65 0.0022 30.0 4.1 47 239-299 394-440 (497)
80 2yhw_A Bifunctional UDP-N-acet 23.6 49 0.0017 29.0 3.1 48 111-160 128-182 (343)
81 2jsh_A Appetite-regulating hor 23.6 16 0.00053 19.3 -0.1 13 305-317 9-21 (26)
82 1z05_A Transcriptional regulat 22.3 1.6E+02 0.0053 26.7 6.4 52 107-160 201-259 (429)
83 2yhx_A Hexokinase B; transfera 22.3 52 0.0018 30.6 3.1 50 241-299 386-442 (457)
84 2yhw_A Bifunctional UDP-N-acet 22.2 1.3E+02 0.0045 26.1 5.7 16 3-18 32-47 (343)
85 1z6r_A MLC protein; transcript 21.8 1.6E+02 0.0055 26.3 6.3 51 108-160 180-237 (406)
86 1woq_A Inorganic polyphosphate 21.7 2.2E+02 0.0074 23.6 6.8 53 106-160 106-166 (267)
87 1djx_A PLC-D1, phosphoinositid 21.4 54 0.0018 31.8 3.1 42 67-115 237-278 (624)
88 2itm_A Xylulose kinase, xylulo 21.0 97 0.0033 28.7 4.7 48 239-299 387-434 (484)
89 2q2r_A Glucokinase 1, putative 20.5 23 0.0008 31.7 0.3 47 112-159 125-205 (373)
90 2dpn_A Glycerol kinase; thermu 20.4 83 0.0028 29.3 4.1 46 240-299 400-445 (495)
91 3a5f_A Dihydrodipicolinate syn 20.0 2.1E+02 0.0073 24.4 6.4 53 55-115 12-68 (291)
No 1
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.1e-76 Score=555.47 Aligned_cols=315 Identities=28% Similarity=0.442 Sum_probs=276.6
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEecccceeecCC--------------------------------CcccccCccccc
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE--------------------------------DGSSSVDNSTLV 49 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~--------------------------------~~~~g~~~~~~~ 49 (325)
++||||+||+++|+||| ||+.|+.+|||.+++... +.++| |++...
T Consensus 6 ~~iViDnGs~~~KaG~a-g~~~P~~v~Ps~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~ea~~~ 83 (427)
T 3dwl_A 6 VPIIMDNGTGYSKLGYA-GNDAPSYVFPTVIATRSAGASSGPAVSSKPSYMASKGSGHLSSKRATEDLDFFIG-NDALKK 83 (427)
T ss_dssp SCEEECCCSSBC-CEET-TSSSCSCCCBCCEECC------------------------------CCSSCCEET-HHHHHT
T ss_pred CeEEEECCCCeEEEEEC-CCCCCCCcCCceEEeecccccccccccccccccccccccccccccCcccCCeEEc-hHHhhC
Confidence 68999999999999999 999999999999976421 35788 887665
Q ss_pred c--Cce-eccccCCeecCHHHHHHHHHHHHHhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhh
Q 020526 50 E--DVT-VDPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAV 126 (325)
Q Consensus 50 ~--~~~-~~p~~~g~i~d~~~~~~il~~~~~~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~ 126 (325)
+ .++ ++|+++|.|.|||.+|++|+|+|.+.|++++ .+||++++||+++++..|++++|++||.|++|+++++.+++
T Consensus 84 ~~~~l~~~~Pi~~GvI~dwd~~e~iw~~~~~~~L~v~~-~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~v 162 (427)
T 3dwl_A 84 ASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEP-EDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAV 162 (427)
T ss_dssp HHHHCCCCCSEETTEECCHHHHHHHHHHHHHTTSCCCG-GGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHH
T ss_pred cccCcEEecCcccCeeccHHHHHHHHHHHHhHhhCCCC-cCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHH
Confidence 5 455 4999999999999999999999999999999 89999999999999999999999999999999999999999
Q ss_pred hhhhhcC--------CceEEEEEcCCCceEEEEeecCeeccccceeecCcc-----------------------------
Q 020526 127 LSLYAVG--------RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGD----------------------------- 169 (325)
Q Consensus 127 ~a~~~~g--------~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~ge----------------------------- 169 (325)
||+|++| .+||+|||+|++.|+|+||++|+++.++++++++|.
T Consensus 163 la~~a~G~~~~~~~~~~tglVVDiG~g~T~v~PV~~G~~l~~~~~rl~~gG~~lt~~L~~lL~~~~~~~~~~~~~~~IKe 242 (427)
T 3dwl_A 163 LALAASWTSSKVTDRSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDRNEPDSSLKTAERIKE 242 (427)
T ss_dssp HHHHGGGGSTTTCSCCCCEEEEEESSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHTTC--------CHHHHHHHH
T ss_pred HHHHhcCCcccccCCCceEEEEECCCCceEEEEEECCEEehhhheeccccHHHHHHHHHHHHHHcCCCchhHHHHHHHHH
Confidence 9999998 689999999999999999999999999999999991
Q ss_pred hhch-----hhhcc-----cCCcceEEC--CCCc--EEEecceeeccccccccCCCCCCc-CCcHHHHHHHHHHhCChHH
Q 020526 170 ELAY-----EKTQK-----SCEIEQHTL--PDGQ--VIRIGKERYTVGEALFQPSILGLE-AHGIVEQLVHTISTVSSEN 234 (325)
Q Consensus 170 ~~~~-----~~~~~-----~~~~~~~~l--pd~~--~i~l~~e~~~~~E~lF~p~~~~~~-~~~i~~~I~~~i~~~~~d~ 234 (325)
+.+| .++.. ....+.|.+ |||+ .+.++.|||.+||+||+|++++.+ ..+|+++|.++|++||+|+
T Consensus 243 ~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dl 322 (427)
T 3dwl_A 243 ECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDV 322 (427)
T ss_dssp HHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHH
T ss_pred hcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHH
Confidence 1222 11111 112466777 8887 888999999999999999999988 4899999999999999999
Q ss_pred HHhccccEEEecCCCCccchHHHHHHhh-ccC--------------CCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 235 HRQLLENTVLCGGTTSMTGFEDRFQKEA-GLC--------------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 235 r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~--------------~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
|+.|++||||+||+|++|||.+||++|| +++ |..++++|+.+|+ |++++|+|||++|++
T Consensus 323 r~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~------r~~s~WiGGSilasl 396 (427)
T 3dwl_A 323 RKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKR------QRNAVWFGGSLLAQT 396 (427)
T ss_dssp HHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTT------CTTHHHHHHHHHHHS
T ss_pred HHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCc------cccceecCceeeccc
Confidence 9999999999999999999999999999 876 5567899999998 999999999999999
Q ss_pred CCCCCeeeeHHHHhhcCcchhhcccC
Q 020526 300 VFPQNQHITKADYDESGPSVVHRKCF 325 (325)
Q Consensus 300 ~~~~~~~itk~ey~e~G~~~~~~k~~ 325 (325)
++|+++||||+||+|+|+++++||++
T Consensus 397 ~~f~~~witk~EYeE~G~~iv~~~~~ 422 (427)
T 3dwl_A 397 PEFGSYCHTKADYEEYGASIARRYQI 422 (427)
T ss_dssp TTHHHHSEEHHHHHHSCGGGGSCCCC
T ss_pred cchhheeEEHHHHhhhChHhheeccc
Confidence 99999999999999999999999974
No 2
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-75 Score=555.11 Aligned_cols=314 Identities=24% Similarity=0.423 Sum_probs=283.2
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcEecccceeecC----CCcccccCc-ccccc-Cce-eccccCCeecCHHHHHHHHH
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL----EDGSSSVDN-STLVE-DVT-VDPVVRGFIRDWDAMEDLLH 73 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~----~~~~~g~~~-~~~~~-~~~-~~p~~~g~i~d~~~~~~il~ 73 (325)
+++||||+||++||+||+ |++.|+.++||++++.. ++.++| ++ +...+ .++ ++|+++|.|.|||++|.+|+
T Consensus 23 ~~~iVID~GS~~~kaG~a-g~~~P~~v~PSvVg~~~~~~~~~~~vG-~e~~~~~r~~l~l~~Pi~~GvI~dwd~~E~iw~ 100 (498)
T 3qb0_A 23 VSAVVIDPGSYTTNIGYS-GSDFPQSILPSVYGKYTADEGNKKIFS-EQSIGIPRKDYELKPIIENGLVIDWDTAQEQWQ 100 (498)
T ss_dssp BSCEEEECCSSEEEEEET-TCSSCSEEEESEEEEESSCSSCCEECC-TTGGGSCCTTEEEEESEETTEESCHHHHHHHHH
T ss_pred CCeEEEECCCcEEEEEEC-CCCCeeeecCceeEEeccCCCccEEEe-cHHHhcCcCceEEeccCcCCEEccHHHHHHHHH
Confidence 368999999999999999 99999999999998753 246789 76 44444 566 49999999999999999999
Q ss_pred HHHHhccCCCCCCCc-eEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCceEEEEEcCCCceEEEEe
Q 020526 74 HVLYAGLGWEEGNEG-QILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPV 152 (325)
Q Consensus 74 ~~~~~~l~~~~~~~~-~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVdiG~~~t~v~pv 152 (325)
|+|.+.|++++ .++ |+|+++|++++...|+++++++||.|++|+++++.+++||+|++|+++|+|||+|++.|+|+||
T Consensus 101 ~~f~~~L~v~p-~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~~tglVVDiG~g~T~vvPI 179 (498)
T 3qb0_A 101 WALQNELYLNS-NSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGRPNCLVVDIGHDTCSVSPI 179 (498)
T ss_dssp HHHHHTSCCSC-CTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTCSSEEEEEECSSCEEEEEE
T ss_pred HHHHhhhCCCc-ccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCCCeEEEEEcCCCcEEEEEE
Confidence 99998999999 889 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCeeccccceeecCcch---------h-----------------------------ch-----hh-------h------
Q 020526 153 IEGAVQHIASRRFEVGDE---------L-----------------------------AY-----EK-------T------ 176 (325)
Q Consensus 153 ~~G~~i~~~~~~~~~ge~---------~-----------------------------~~-----~~-------~------ 176 (325)
++|+++.++++++++|.+ + .| +. +
T Consensus 180 ~~G~~l~~ai~rl~vgG~~lt~~L~~lL~~~~i~P~~~i~~k~~~~~~~~~~~~~~~s~~~~~~~~~iv~~iKE~~c~Va 259 (498)
T 3qb0_A 180 VDGMTLSKSTRRNFIAGKFINHLIKKALEPKEIIPLFAIKQRKPEFIKKTFDYEVDKSLYDYANNRGFFQECKETLCHIC 259 (498)
T ss_dssp ETTEECGGGCEEESCSHHHHHHHHHHHTTTSCCCCSTTEEECSSSCEECCCSSCCCHHHHHHHHHHTHHHHHHHHTCCCC
T ss_pred eCCEEccccceeccccHHHHHHHHHHHHHhccccchhhhcccccccccccCCCccCccHHHHHHHHHHHHHHHHhhEEec
Confidence 999999999999999921 0 00 00 0
Q ss_pred -c----------ccCCcceEECCCCcEEEecce-eeccccccccCCCCCC------------------------------
Q 020526 177 -Q----------KSCEIEQHTLPDGQVIRIGKE-RYTVGEALFQPSILGL------------------------------ 214 (325)
Q Consensus 177 -~----------~~~~~~~~~lpd~~~i~l~~e-~~~~~E~lF~p~~~~~------------------------------ 214 (325)
. .+...+.|+||||+.|.+++| ||.+||+||+|++++.
T Consensus 260 ~~~~~~~~~~~~~~~~~~~yeLPDG~~i~lg~E~Rf~~pE~LF~P~~~g~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 339 (498)
T 3qb0_A 260 PTKTLEETKTELSSTAKRSIESPWNEEIVFDNETRYGFAEELFLPKEDDIPANWPRSNSGVVKTWRNDYVPLKRTKPSGV 339 (498)
T ss_dssp SSCHHHHHHHHHHTCCCEEEECSSSCEEEECHHHHHHHHHTTTSCCGGGSCTTSCCCSSSCCCCCSCCCCCCCBCC----
T ss_pred CCccHhHHhhhccCcCceEEECCCCCEEEECchHhhhCchhhCCHhHcCCcccccccccccccccccccccccccccccc
Confidence 0 011246899999999999999 9999999999986643
Q ss_pred --------------------------------------------------cCCcHHHHHHHHHHhCChHHHHhccccEEE
Q 020526 215 --------------------------------------------------EAHGIVEQLVHTISTVSSENHRQLLENTVL 244 (325)
Q Consensus 215 --------------------------------------------------~~~~i~~~I~~~i~~~~~d~r~~l~~nIil 244 (325)
+..||+++|.++|++||+|+|+.|++||||
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~e~i~~sI~~cd~d~r~~L~~nIvL 419 (498)
T 3qb0_A 340 NKSDKKVTPTEEKEQEAVSKSTSPAANSADTPNETGKRPLEEEKPPKENNELIGLADLVYSSIMSSDVDLRATLAHNVVL 419 (498)
T ss_dssp -------------------------------------------------CCSCCHHHHHHHHHHTSCTTTHHHHHTTEEE
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccCCCchHHHHHHHHhCCHHHHHHHhcCEEE
Confidence 567999999999999999999999999999
Q ss_pred ecCCCCccchHHHHHHhh-ccCCCCcceEEeCC---CCCCCCCCCceeeeehhhhhhccCCCCCeeeeHHHHhhcCc-ch
Q 020526 245 CGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKP---PEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGP-SV 319 (325)
Q Consensus 245 ~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~---~~~~~~~~~~~~~W~G~si~a~l~~~~~~~itk~ey~e~G~-~~ 319 (325)
+||++++|||.+||++|| +++| ..+++|+.+ ++ |.+++|+|||++|++++|+++||||+||+|+|+ ++
T Consensus 420 sGGst~~pGf~~Rl~~El~~l~p-~~~i~v~~~~~~~e------r~~s~WiGgsilasl~~f~~~witk~EY~E~G~~~i 492 (498)
T 3qb0_A 420 TGGTSSIPGLSDRLMTELNKILP-SLKFRILTTGHTIE------RQYQSWLGGSILTSLGTFHQLWVGKKEYEEVGVERL 492 (498)
T ss_dssp ESGGGGSTTHHHHHHHHHHHHST-TSCCCEECCSCTGG------GGSHHHHHHHHHHTCHHHHHTSEEHHHHHTTCCHHH
T ss_pred eCCccCchhHHHHHHHHHHHhCC-CCeeEEEcCCCCCc------cCccEEcccEEEecCcchhceEEEHHHHhhhCcHhh
Confidence 999999999999999999 9999 889999987 55 899999999999999999999999999999999 99
Q ss_pred hhccc
Q 020526 320 VHRKC 324 (325)
Q Consensus 320 ~~~k~ 324 (325)
|+|||
T Consensus 493 v~~kc 497 (498)
T 3qb0_A 493 LNDRF 497 (498)
T ss_dssp HHHTT
T ss_pred ccccC
Confidence 99998
No 3
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=100.00 E-value=3e-68 Score=498.26 Aligned_cols=316 Identities=43% Similarity=0.690 Sum_probs=283.4
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcEecccceeecC----------CCcccccCcccccc-Cce-eccccCCeecCHHHH
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL----------EDGSSSVDNSTLVE-DVT-VDPVVRGFIRDWDAM 68 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~----------~~~~~g~~~~~~~~-~~~-~~p~~~g~i~d~~~~ 68 (325)
+++||||+||+++|+||+ |++.|+.++||.+++.. ++.++| +++...+ .++ .+|+++|.|.|||.+
T Consensus 5 ~~~ivID~Gs~~~k~G~~-~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG-~~a~~~~~~~~~~~Pi~~G~i~d~d~~ 82 (375)
T 2fxu_A 5 TTALVCDNGSGLVKAGFA-GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVG-DEAQSKRGILTLKYPIEHGIITNWDDM 82 (375)
T ss_dssp CCCEEEEECSSEEEEEET-TCSSCSEEEECCEEEECTTTC-------CCEEH-HHHHHHTTSEEEECSEETTEECCHHHH
T ss_pred CceEEEECCCCeEEEEEC-CCCCCceeeccccccccccccccCCCCCCeEec-hhHhhcCcccceeccccCCcccCHHHH
Confidence 478999999999999999 99999999999998642 235788 8876555 344 499999999999999
Q ss_pred HHHHHHHHHhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCceEEEEEcCCCceE
Q 020526 69 EDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKID 148 (325)
Q Consensus 69 ~~il~~~~~~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVdiG~~~t~ 148 (325)
+.+|+|+|.+.|++++ .++++++++|++++...|+++++++||.+++++++++++|+||+|++|.++++|||+|++.|+
T Consensus 83 e~i~~~~~~~~L~~~~-~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~~~~lVvDiG~gtt~ 161 (375)
T 2fxu_A 83 EKIWHHTFYNELRVAP-EEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTH 161 (375)
T ss_dssp HHHHHHHHHTTSCCCG-GGSCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTCSSEEEEEECSSCEE
T ss_pred HHHHHHHHHHhcCCCC-cCCcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCCCeEEEEEcCCCceE
Confidence 9999999988899998 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEeecCeeccccceeecCcch--------------------------------hch-----hhhc-----ccCCcceEE
Q 020526 149 IAPVIEGAVQHIASRRFEVGDE--------------------------------LAY-----EKTQ-----KSCEIEQHT 186 (325)
Q Consensus 149 v~pv~~G~~i~~~~~~~~~ge~--------------------------------~~~-----~~~~-----~~~~~~~~~ 186 (325)
|+||++|+++.++..++++|.+ .+| .++. .+.....|.
T Consensus 162 v~~v~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~ 241 (375)
T 2fxu_A 162 NVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE 241 (375)
T ss_dssp EEEEETTEECGGGCEEESCCHHHHHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE
T ss_pred EeEeECCEEeccceEEeccCHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE
Confidence 9999999999999999999921 011 0000 011246799
Q ss_pred CCCCcEEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccC
Q 020526 187 LPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLC 265 (325)
Q Consensus 187 lpd~~~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~ 265 (325)
+|||+.+.++.+||.++|.||+|.+++.+..+|+++|.++|++||+|+|+.+++||+||||+|++|||.+||++|| ++.
T Consensus 242 lpdg~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~ 321 (375)
T 2fxu_A 242 LPDGQVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALA 321 (375)
T ss_dssp CTTSCEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHS
T ss_pred CCCCCEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999 899
Q ss_pred CCCcceEEeCCCCCCCCCCCceeeeehhhhhhccCCCCCeeeeHHHHhhcCcchhhcccC
Q 020526 266 SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQHITKADYDESGPSVVHRKCF 325 (325)
Q Consensus 266 ~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~~~~~~~itk~ey~e~G~~~~~~k~~ 325 (325)
|...++++..+++ |.+++|+|||++|++++|+++||||+||+|+|+++++||||
T Consensus 322 p~~~~v~v~~~~~------p~~~~w~G~si~a~l~~f~~~~itk~ey~e~G~~~~~~k~~ 375 (375)
T 2fxu_A 322 PSTMKIKIIAPPE------RKYSVWIGGSILASLSTFQQMWITKQEYDEAGPSIVHRKCF 375 (375)
T ss_dssp CTTCCCCEECCTT------TTSHHHHHHHHHHHCGGGGGGSEEHHHHHHHCGGGGC----
T ss_pred CCCeeEEEEcCCC------CCccEEcchHHhhCcccHhhceeeHHHHhhhChHHHhhhcc
Confidence 9888899988888 89999999999999999999999999999999999999996
No 4
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=100.00 E-value=7e-69 Score=530.72 Aligned_cols=317 Identities=19% Similarity=0.287 Sum_probs=246.1
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEecccceeecC---------------------------------------------
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL--------------------------------------------- 36 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~--------------------------------------------- 36 (325)
+.||||+||+++|+||| ||+.|+. +|+++++..
T Consensus 16 ~iIVIdpGS~~~riG~A-~d~~P~~-iP~~iar~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 93 (593)
T 4fo0_A 16 FIIVIHPGSTTLRIGRA-TDTLPAS-IPHVIARRHKQQGQPLYKDSWLLREGLNKPESNEQRQNGLKMVDQAIWSKKMSN 93 (593)
T ss_dssp GEEEEECCSSEEEEEET-TCSSCEE-EECCEEEECSSTTCCCCBCCSSCCTTTTSTTHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred CEEEEeCCCCCeEeeec-CCCCCCe-eeEEEEEECCCCCCCcccccccccccccccchhhhhhhhHHHHHHHHHHHhhhc
Confidence 36999999999999999 9999975 699997621
Q ss_pred --------------------------------------CCcccccCccccc---cCcee-ccccCC-----------eec
Q 020526 37 --------------------------------------EDGSSSVDNSTLV---EDVTV-DPVVRG-----------FIR 63 (325)
Q Consensus 37 --------------------------------------~~~~~g~~~~~~~---~~~~~-~p~~~g-----------~i~ 63 (325)
.+.++| ++|... ..+.+ ||+++| .+.
T Consensus 94 ~~r~~~~s~~~~~~~n~~~~p~~i~~~~~~~~~~~~~~~~~~vG-~~al~~~~~~~~~l~~Pi~~G~~n~~~~~~~s~~~ 172 (593)
T 4fo0_A 94 GTRRIPVSPEQARSYNKQMRPAILDHCSGNKWTNTSHHPEYLVG-EEALYVNPLDCYNIHWPIRRGQLNIHPGPGGSLTA 172 (593)
T ss_dssp SCCCCCCCHHHHHHHHTTCCCEEEESSCSCCCCCCTTCCSEEET-HHHHTSCTTSSEEEECSEETTEECCCSSTTCSHHH
T ss_pred ccccCCCcHHHhhhhhccCCCcccCCCCcccccccccccccccc-HHHhhcCCcccceEecCcccCccccccCCccchhc
Confidence 123566 666432 24554 999999 467
Q ss_pred CHHHHHHHHHHHHHhccCCCCCCC---ceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCceEEEE
Q 020526 64 DWDAMEDLLHHVLYAGLGWEEGNE---GQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTV 140 (325)
Q Consensus 64 d~~~~~~il~~~~~~~l~~~~~~~---~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVV 140 (325)
|||++|+||+|+|.+.|++++ ++ ||+||++|+++++..|++|++++||+|+||+++++++++||+|++|++|||||
T Consensus 173 ~wdd~e~iw~~~~~~~L~i~~-~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~~tglVV 251 (593)
T 4fo0_A 173 VLADIEVIWSHAIQKYLEIPL-KDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGLSSTCIV 251 (593)
T ss_dssp HHHHHHHHHHHHHHHTSCCCG-GGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTCSEEEEE
T ss_pred CHHHHHHHHHHHHHHhcCCCc-hhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCCCceEEE
Confidence 999999999999999999987 54 99999999999999999999999999999999999999999999999999999
Q ss_pred EcCCCceEEEEeecCeeccccceeecCcch-------------------------------------hchhhhc------
Q 020526 141 DIGHGKIDIAPVIEGAVQHIASRRFEVGDE-------------------------------------LAYEKTQ------ 177 (325)
Q Consensus 141 diG~~~t~v~pv~~G~~i~~~~~~~~~ge~-------------------------------------~~~~~~~------ 177 (325)
|+|++.|+|+||+||+++.++++++++|.+ .||....
T Consensus 252 DiG~~~T~v~PV~dG~~l~~~~~rl~~GG~~lt~~L~~lL~~~~~~~~~~~~~~~~d~~~v~~iKe~~c~v~~d~~~~~~ 331 (593)
T 4fo0_A 252 DVGDQKTSVCCVEDGVSHRNTRLCLAYGGSDVSRCFYWLMQRAGFPYRECQLTNKMDCLLLQHLKETFCHLDQDISGLQD 331 (593)
T ss_dssp EECSSCEEEEEEESSCBCGGGCEEESCCHHHHHHHHHHHHHHTTCSCTTCCTTCHHHHHHHHHHHHHHCBCCTTCCSCEE
T ss_pred EeCCCceeeeeeECCEEehhheEEecccHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhcccccchHHhhh
Confidence 999999999999999999999999999911 1110000
Q ss_pred ---------------------------------------------------------------------------ccCCc
Q 020526 178 ---------------------------------------------------------------------------KSCEI 182 (325)
Q Consensus 178 ---------------------------------------------------------------------------~~~~~ 182 (325)
.....
T Consensus 332 ~~~~~~~p~~~~~~~~~~~~~E~~~~p~~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (593)
T 4fo0_A 332 HEFQIRHPDSPALLYQFRLGDEKLQAPMALFYPATFGIVGQKMTTLQHRSQGDPEDPHDEHYLLATQSKQEQSAKATADR 411 (593)
T ss_dssp EEEEECCTTSCEEEEEEEECTHHHHHHHTTTSGGGGCCCSSCCEEECC--------------------------------
T ss_pred hhhhcccCCCCceeeEEeccchhhcCchhhcChhhhcccccccchhhhhcccCcccchhhhhhhhcccchhhhhhccccc
Confidence 00011
Q ss_pred ceEECCCCcEEEecceeeccccccccCCCC--------------------------------CCcCCcHHHHHHHHHHhC
Q 020526 183 EQHTLPDGQVIRIGKERYTVGEALFQPSIL--------------------------------GLEAHGIVEQLVHTISTV 230 (325)
Q Consensus 183 ~~~~lpd~~~i~l~~e~~~~~E~lF~p~~~--------------------------------~~~~~~i~~~I~~~i~~~ 230 (325)
..+.+|++..+.++.+++.+||.||+|... +.+..+|+++|.++|.+|
T Consensus 412 ~~~~~p~g~~~~~~~e~~~~pe~lf~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gL~~aI~~SI~~~ 491 (593)
T 4fo0_A 412 KSASKPIGFEGDLRGQSSDLPERLHSQEVDLGSAQGDGLMAGNDSEEALTALMSRKTAISLFEGKALGLDKAILHSIDCC 491 (593)
T ss_dssp -----------------------------------------------------------CHHHHSCCCHHHHHHHHHHTC
T ss_pred ccccCCCCcccccccccccCchhccCcccccccccccccccccccccccccccccccccccccccCCCHHHHHHHHHHhC
Confidence 356678888888899999999999998532 123468999999999999
Q ss_pred C-hHHHHhccccEEEecCCCCccchHHHHHHhh-ccCCCCc-----ceEEeCCCCCCCCCCCceeeeehhhhhhccCCCC
Q 020526 231 S-SENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAI-----RPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQ 303 (325)
Q Consensus 231 ~-~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~~~-----~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~~~~ 303 (325)
| +|+|+.|++||+||||+|++|||.+||++|| +++|... +++|+.+|. ..+|++++|+|||++|+|++|+
T Consensus 492 ~~~D~r~~L~~NIvltGG~s~~pGf~~RL~~eL~~~~p~~~~~~~~~v~v~~~p~---~~d~~~~aW~GgSilasL~~f~ 568 (593)
T 4fo0_A 492 SSDDTKKKMYSSILVVGGGLMFHKAQEFLQHRILNKMPPSFRRIIENVDVITRPK---DMDPRLIAWKGGAVLACLDTTQ 568 (593)
T ss_dssp SSHHHHHHHHHEEEEESSTTCCBTHHHHHHHHHHHHSCHHHHHHSSCCEEESSGG---GCCTTTHHHHHHHHHHHCGGGG
T ss_pred CcHHHHHHHhCCEEEEchhhchhcHHHHHHHHHHHhCcchhccccceEEEECCCC---CCCCceeeehhhHHHhcCccHH
Confidence 9 5999999999999999999999999999999 8888653 589998884 3348999999999999999999
Q ss_pred CeeeeHHHHhhcCcchhhcccC
Q 020526 304 NQHITKADYDESGPSVVHRKCF 325 (325)
Q Consensus 304 ~~~itk~ey~e~G~~~~~~k~~ 325 (325)
++||||+||+|+|+++|++||+
T Consensus 569 ~~wItk~EYeE~G~~il~~kc~ 590 (593)
T 4fo0_A 569 ELWIYQREWQRFGVRMLRERAA 590 (593)
T ss_dssp GTCEEHHHHHHHTTHHHHHHCS
T ss_pred HeeECHHHHHhhCcHHHhhcCC
Confidence 9999999999999999999995
No 5
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=100.00 E-value=8.2e-69 Score=504.85 Aligned_cols=312 Identities=33% Similarity=0.598 Sum_probs=119.2
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEecccceeecC------------CCcccccCcccccc-Cce-eccccCCeecCHHH
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVL------------EDGSSSVDNSTLVE-DVT-VDPVVRGFIRDWDA 67 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~------------~~~~~g~~~~~~~~-~~~-~~p~~~g~i~d~~~ 67 (325)
++||||+||+++|+||+ |++.|+.++||++++.. ++.++| +++...+ .++ ++|+++|.|.|||.
T Consensus 7 ~~ivID~Gs~~~k~G~a-g~~~P~~~~Ps~v~~~~~~~~~~~~~~~~~~~~vG-~ea~~~~~~~~~~~Pi~~G~i~dwd~ 84 (394)
T 1k8k_B 7 KVVVCDNGTGFVKCGYA-GSNFPEHIFPALVGRPIIRSTTKVGNIEIKDLMVG-DEASELRSMLEVNYPMENGIVRNWDD 84 (394)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CEEEEECCCCeEEEeeC-CCCCcceeccceeEEEcccccccccCCCCCCeEEC-hHHHhcCCCceeeccccCCEEecHHH
Confidence 78999999999999999 99999999999987542 245688 8886655 344 49999999999999
Q ss_pred HHHHHHHHH-HhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCceEEEEEcCCCc
Q 020526 68 MEDLLHHVL-YAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGK 146 (325)
Q Consensus 68 ~~~il~~~~-~~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVdiG~~~ 146 (325)
++.+|+|+| .+.|++++ .++++++++|++++...|+++++++||.+++++++++++++||+|++|.++|+|||+|++.
T Consensus 85 ~e~i~~~~~~~~~L~~~~-~~~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~~~~lVVDiG~g~ 163 (394)
T 1k8k_B 85 MKHLWDYTFGPEKLNIDT-RNCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGVVVDSGDGV 163 (394)
T ss_dssp ----------------------------------------------------------------------CCEEEECSSC
T ss_pred HHHHHHHHhcccccCcCC-CCCcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCCceEEEEEcCCCc
Confidence 999999999 88899998 8999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEeecCeeccccceeecCcch--------------------------------hchh-----hhc-----ccCCcce
Q 020526 147 IDIAPVIEGAVQHIASRRFEVGDE--------------------------------LAYE-----KTQ-----KSCEIEQ 184 (325)
Q Consensus 147 t~v~pv~~G~~i~~~~~~~~~ge~--------------------------------~~~~-----~~~-----~~~~~~~ 184 (325)
|+|+||++|+++.+++.++++|.+ .+|. ++. .+.....
T Consensus 164 T~v~pv~~G~~~~~~~~~~~~GG~~lt~~l~~~l~~~~~~~~~~~~~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~~~~~ 243 (394)
T 1k8k_B 164 THICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETVRMIKEKLCYVGYNIEQEQKLALETTVLVES 243 (394)
T ss_dssp EEEECEETTEECSTTCEEESCCHHHHHHHHHHHHHHTTCCCCTTTTHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEE
T ss_pred eEeeeeECCEEcccceEEeeccHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHhheeEecCHHHHHHhhccCCcCceE
Confidence 999999999999999999999921 1110 110 0112367
Q ss_pred EECCCCcEEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-c
Q 020526 185 HTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-G 263 (325)
Q Consensus 185 ~~lpd~~~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~ 263 (325)
|.+|||+.+.++.+||.++|+||+|++++.+..+|+++|.++|.+||+|+|+.|++||+||||+|++|||.+||++|| .
T Consensus 244 ~~lpdg~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~rl~~el~~ 323 (394)
T 1k8k_B 244 YTLPDGRIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQ 323 (394)
T ss_dssp EECTTSCEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHHHHHHHHH
T ss_pred EECCCCCEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999 8
Q ss_pred cC-----------CCCcceEEeCCCCCCCCCCCceeeeehhhhhhccCCCC-CeeeeHHHHhhcCcchhhc
Q 020526 264 LC-----------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQ-NQHITKADYDESGPSVVHR 322 (325)
Q Consensus 264 ~~-----------~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~~~~-~~~itk~ey~e~G~~~~~~ 322 (325)
+. |...+++|..+|+ |.+++|+|||++|++++|+ ++||||+||+|+|+++++|
T Consensus 324 ~~~~~~~~~~~~~p~~~~v~v~~~~~------~~~~~w~Ggsilasl~~f~~~~~itk~eY~e~G~~~~~~ 388 (394)
T 1k8k_B 324 LYLERVLKGDVEKLSKFKIRIEDPPR------RKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLEK 388 (394)
T ss_dssp HHHHHTCSSCCCTTCCCCC----------------------------------------------------
T ss_pred HHhhhhcccccCCCCceEEEEecCCC------cceeEEhhhHHhhCCcCCccceeecHHHHhhhCHHHHHh
Confidence 77 7777899988888 8999999999999999999 9999999999999999987
No 6
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=100.00 E-value=1.1e-64 Score=480.67 Aligned_cols=315 Identities=30% Similarity=0.441 Sum_probs=280.2
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcEecccceeecCC------------------CcccccCccccccCce-eccccCCe
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE------------------DGSSSVDNSTLVEDVT-VDPVVRGF 61 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~------------------~~~~g~~~~~~~~~~~-~~p~~~g~ 61 (325)
+++||||+||+++|+||+ |++.|+.++||++++... +.++| +++...++++ ++|+++|.
T Consensus 5 ~~~ivID~Gs~~~k~G~~-~~~~p~~~~Ps~v~~~~~~~~~~~~~~~~~~~~~~~~~~vG-~~a~~~~~~~~~~pi~~G~ 82 (418)
T 1k8k_A 5 LPACVVDCGTGYTKLGYA-GNTEPQFIIPSCIAIKESAKVGDQAQRRVMKGVDDLDFFIG-DEAIEKPTYATKWPIRHGI 82 (418)
T ss_dssp SCCEEEEECSSEEEEEET-TCSSCSEEEESCEEECC-----------CCCTTGGGCEEEG-GGGTSCTTSEEECCEETTE
T ss_pred CCeEEEECCCCeEEEeeC-CCCCCCCcCCceEEEECcccccccccccccccccccCeEEC-hHHHhcCCCEEeccccCCE
Confidence 368999999999999999 999999999999976422 25788 8886665566 49999999
Q ss_pred ecCHHHHHHHHHHHHHhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhh---------c
Q 020526 62 IRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYA---------V 132 (325)
Q Consensus 62 i~d~~~~~~il~~~~~~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~---------~ 132 (325)
+.|||.++.+|+|+|.+.|++++ .++++++++|++++...|+++.+++||.+++++++++++|+||+|+ .
T Consensus 83 i~d~d~~e~i~~~~~~~~L~~~~-~~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~~~~~~~ 161 (418)
T 1k8k_A 83 VEDWDLMERFMEQVIFKYLRAEP-EDHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGER 161 (418)
T ss_dssp ESCHHHHHHHHHHHHHTTTCCCG-GGCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGSTTCCSC
T ss_pred ECCHHHHHHHHHHHHHhccCCCC-CCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcccccCCC
Confidence 99999999999999988899998 8999999999999999999999999999999999999999999998 5
Q ss_pred CCceEEEEEcCCCceEEEEeecCeeccccceeecCcch--------------------------------hchh-----h
Q 020526 133 GRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGDE--------------------------------LAYE-----K 175 (325)
Q Consensus 133 g~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~ge~--------------------------------~~~~-----~ 175 (325)
+. +|+|||+|++.|+|+||++|+++.+++.++++|.+ .+|. +
T Consensus 162 ~~-~glVvDiG~gtt~v~~v~~G~~~~~~~~~~~lGG~~lt~~l~~~l~~~~~~~~~~~~~~~~e~iK~~~~~v~~~~~~ 240 (418)
T 1k8k_A 162 TL-TGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERYSYVCPDLVK 240 (418)
T ss_dssp CC-CEEEEEESSSCEEEEEEETTEECGGGCEEESCSHHHHHHHHHHHHHTTCCCCCGGGHHHHHHHHHHHHCCCCSCHHH
T ss_pred CC-eEEEEEcCCCceEEEEeECCEEcccceEEEeCcHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHhhchhcccHHH
Confidence 66 99999999999999999999999999999999921 0110 0
Q ss_pred hc------ccCCcceEECCCCc-----EEEecceeeccccccccCCCCCCcC-CcHHHHHHHHHHhCChHHHHhccccEE
Q 020526 176 TQ------KSCEIEQHTLPDGQ-----VIRIGKERYTVGEALFQPSILGLEA-HGIVEQLVHTISTVSSENHRQLLENTV 243 (325)
Q Consensus 176 ~~------~~~~~~~~~lpd~~-----~i~l~~e~~~~~E~lF~p~~~~~~~-~~i~~~I~~~i~~~~~d~r~~l~~nIi 243 (325)
+. .......|.+||+. .+.++.+||.++|.||+|.+.+.+. .+|+++|.++|++||+|+|+.+++||+
T Consensus 241 e~~~~~~~~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~Iv 320 (418)
T 1k8k_A 241 EFNKYDTDGSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIV 320 (418)
T ss_dssp HHHHHHHSGGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEE
T ss_pred HHHhhcccccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceE
Confidence 00 00112579999988 8999999999999999999888774 799999999999999999999999999
Q ss_pred EecCCCCccchHHHHHHhh-ccC----------------CCCcceEEeCCCCCCCCCCCceeeeehhhhhhccCCCCCee
Q 020526 244 LCGGTTSMTGFEDRFQKEA-GLC----------------SSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQNQH 306 (325)
Q Consensus 244 l~GG~s~~~G~~~rl~~eL-~~~----------------~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~~~~~~~ 306 (325)
|+||+|++|||.+||++|| .+. |...++++..+|+ |.+++|+|||++|++++|+++|
T Consensus 321 L~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~------~~~~~w~Ggsilasl~~f~~~~ 394 (418)
T 1k8k_A 321 LSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHM------QRYAVWFGGSMLASTPEFYQVC 394 (418)
T ss_dssp EESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTT------CTTHHHHHHHHHTTSHHHHHHS
T ss_pred EeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCc------cccceeHhHHHHHcCccHhheE
Confidence 9999999999999999999 764 5677899999888 8999999999999999999999
Q ss_pred eeHHHHhhcCcchhhcccC
Q 020526 307 ITKADYDESGPSVVHRKCF 325 (325)
Q Consensus 307 itk~ey~e~G~~~~~~k~~ 325 (325)
|||+||+|+|+++++|||+
T Consensus 395 itk~ey~e~G~~~~~~~~~ 413 (418)
T 1k8k_A 395 HTKKDYEEIGPSICRHNPV 413 (418)
T ss_dssp EEHHHHHHHCGGGGGCCCC
T ss_pred EEHHHHhhhCHHHHhhhcc
Confidence 9999999999999999873
No 7
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=100.00 E-value=4.6e-54 Score=413.63 Aligned_cols=282 Identities=18% Similarity=0.336 Sum_probs=231.1
Q ss_pred cccccCccccc-c-Cce-eccccCCeec----C-------HHHHHHHHHHHHHh-ccCCCCCC---CceEEEEcCCCCCH
Q 020526 39 GSSSVDNSTLV-E-DVT-VDPVVRGFIR----D-------WDAMEDLLHHVLYA-GLGWEEGN---EGQILFTDPLCSPK 100 (325)
Q Consensus 39 ~~~g~~~~~~~-~-~~~-~~p~~~g~i~----d-------~~~~~~il~~~~~~-~l~~~~~~---~~~vll~~~~~~~~ 100 (325)
.++| ++|..+ + .+. ++|+++|.|. | ||.++.+|+|+|.+ .|++++ . ++|+|+++|+++++
T Consensus 157 ~~VG-dEA~~~~r~~l~l~~PI~~GvI~~~s~Dy~s~q~~WD~mE~Iw~y~f~~~~L~V~p-~~~~e~pVLLTEPplnp~ 234 (655)
T 4am6_A 157 LYYG-SDALRCVDEKFVIRKPFRGGSFNVKSPYYKSLAELISDVTKLLEHALNSETLNVKP-TKFNQYKVVLVIPDIFKK 234 (655)
T ss_dssp CEEH-HHHHTBCTTTEEEECSEETTEECTTCSSCSSHHHHHHHHHHHHHHHHBSSSCBCCG-GGGGGCEEEEEECTTCCH
T ss_pred EEEe-hHHhhCCccCeEEeccccCCEecccCCccccccccHHHHHHHHHHHhccccccccc-cccCCCcEEEEeCCCCCH
Confidence 4456 666542 2 455 4999999998 8 99999999999984 899888 5 89999999999999
Q ss_pred HHHHHHHHHhhhhcCCCeEEEechhhhhhhhcC-CceEEEEEcCCCceEEEEeecCeeccccceeecCcch---------
Q 020526 101 AVREQLVQLMFETFNISGFYSSEQAVLSLYAVG-RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGDE--------- 170 (325)
Q Consensus 101 ~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g-~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~ge~--------- 170 (325)
..|+++++++||.|++|+++++.++++|+|++| .++|+|||+|++.|+|+||++|+++.++++++++|.+
T Consensus 235 ~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl~ttGLVVDiG~g~T~VvPV~eG~vl~~ai~rL~iGG~dLT~yL~kL 314 (655)
T 4am6_A 235 SHVETFIRVLLTELQFQAVAIIQESLATCYGAGISTSTCVVNIGAAETRIACVDEGTVLEHSAITLDYGGDDITRLFALF 314 (655)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCCSSCEEEEEECSSCEEEEEEETTEECGGGCEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCCCCceEEEcCCCceEEEEEEeCCEEEhhheeeecchHHHHHHHHHHH
Confidence 999999999999999999999999999999999 6999999999999999999999999999999999922
Q ss_pred ----------------------------hchhhhcc-cCCcceE--ECCCC----cEEEecceeeccccccccCCCCCC-
Q 020526 171 ----------------------------LAYEKTQK-SCEIEQH--TLPDG----QVIRIGKERYTVGEALFQPSILGL- 214 (325)
Q Consensus 171 ----------------------------~~~~~~~~-~~~~~~~--~lpd~----~~i~l~~e~~~~~E~lF~p~~~~~- 214 (325)
.||..... ..+...| ..|++ ..+.++.|+|.+||+||+|.+++.
T Consensus 315 L~~rgypy~~~~f~t~~e~eiVrdIKEk~CyVs~~Di~~q~~~f~~r~P~~~~~ky~i~vgdErflaPe~lF~Pei~~~~ 394 (655)
T 4am6_A 315 LLQSDFPLQDWKIDSKHGWLLAERLKKNFTTFQDADVAVQLYNFMNRSPNQPTEKYEFKLFDEVMLAPLALFFPQIFKLI 394 (655)
T ss_dssp HHHTTCSCCSCCTTSHHHHHHHHHHHHHHCCCCGGGCCSEEEEEEECCSSSCEEEEEEEESSHHHHHHHGGGSTHHHHHT
T ss_pred HHHcCCCccccCCCCcchHHHHHHHHHheEEEcccchhhhhhcceeccCCCCCcceEEEECCeehhCchhcCChhhcccc
Confidence 11111100 0111222 24654 368899999999999999864310
Q ss_pred -----------------------------------------------c-------------------------------C
Q 020526 215 -----------------------------------------------E-------------------------------A 216 (325)
Q Consensus 215 -----------------------------------------------~-------------------------------~ 216 (325)
+ .
T Consensus 395 ~~~~~~~~~~~~~~~~s~d~y~~~~nd~~S~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (655)
T 4am6_A 395 RTSSHKNSSLEFQLPESRDLFTNELNDWNSLSQFESKEGNLYCDLNDDLKILNRILDAHNIIDQLQDKPENYGNTLKENF 474 (655)
T ss_dssp SCCCCCCHHHHTTSCCCBCTTTCCBCSCCCHHHHHHHTTCCGGGCCSHHHHHHHHHHHHHHHHHHHTSSCSCSCSSCCCC
T ss_pred cccccccchhhhhcCccccccCCCCCCccchhHHhhhccccCCCCccHhhhhhhhhcccccccccccCCccccccccccc
Confidence 0 1
Q ss_pred CcHHHHHHHHHHh-C-ChHHHH--hccccEEEecCCCCccchHHHHHHhh-ccCCC------------------------
Q 020526 217 HGIVEQLVHTIST-V-SSENHR--QLLENTVLCGGTTSMTGFEDRFQKEA-GLCSS------------------------ 267 (325)
Q Consensus 217 ~~i~~~I~~~i~~-~-~~d~r~--~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~------------------------ 267 (325)
.+|-++|+++|.+ | ..|.++ ++|+||+++||+|++|||...|+..| ...|.
T Consensus 475 ~pLdkAIi~SIt~a~~~~d~~k~~~~y~nilivGggski~g~~~~L~dri~i~rp~~~s~~~~~~~~~~~~~~~~~~~~~ 554 (655)
T 4am6_A 475 APLEKAIVQSIANASITADVTRMNSFYSNILIVGGSSKIPALDFILTDRINIWRPSLLSSASFPQFYKKLTKEIKDLEGH 554 (655)
T ss_dssp CCHHHHHHHHHHHHHHTSCGGGHHHHHTCEEEESTTCCCTTHHHHHHHHHHHHSCSTTTBTTHHHHHHHHHHHHHHHHST
T ss_pred ccHHHHHHHHHHhhhccccHHHHHHHhhcEEEEcCcccCccHHHHHHHHHHhhCcccccccccHHHHHHHHHhhhhhhhh
Confidence 4889999999984 3 225544 99999999999999999998888777 43331
Q ss_pred -------------------------------------------CcceEEeCCCCCCCCCCCceeeeehhhhhhccCCCCC
Q 020526 268 -------------------------------------------AIRPTLVKPPEYMPENLTLYSAWIGGAILAKVVFPQN 304 (325)
Q Consensus 268 -------------------------------------------~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~~~~~ 304 (325)
-++|+|+.+|. ..+|++++|+|||+||++++|++
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~V~~~p~---~~d~~~~~W~GgSvla~l~~f~e 631 (655)
T 4am6_A 555 YVNAPDKTEDENKQILQAQIKEKIVEELEEQHQNIEHQNGNEHIFPVSIIPPPR---DMNPALIIWKGASVLAQIKLVEE 631 (655)
T ss_dssp TCSCCSSSCCSSTTSTTHHHHHHHHHHHHHHHHHHHHTTSCCCBCCCCEECCCT---TSCGGGHHHHHHHHHTTSHHHHH
T ss_pred hccccccccccchhhhhhhhhhhhhhhhhhhhhhhhhccccCCceeeEEeCCcc---ccCcceeEEecceeeeecccHhh
Confidence 13489999998 44569999999999999999999
Q ss_pred eeeeHHHHhhcCcchhhcccC
Q 020526 305 QHITKADYDESGPSVVHRKCF 325 (325)
Q Consensus 305 ~~itk~ey~e~G~~~~~~k~~ 325 (325)
+||||+||+|+|++++++||+
T Consensus 632 ~wIt~~Eyde~G~~il~~k~~ 652 (655)
T 4am6_A 632 LFITNSDWDVHGSRILQYKCI 652 (655)
T ss_dssp HCEEHHHHHHHGGGGGGTSCS
T ss_pred eeecHHHHhhhcchheEeccc
Confidence 999999999999999999994
No 8
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=99.97 E-value=3.5e-30 Score=237.71 Aligned_cols=274 Identities=15% Similarity=0.185 Sum_probs=207.0
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEecccceeecCC--C-cccccCcccccc-----Cce-eccccCCeecCHHHHHHHH
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLE--D-GSSSVDNSTLVE-----DVT-VDPVVRGFIRDWDAMEDLL 72 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~--~-~~~g~~~~~~~~-----~~~-~~p~~~g~i~d~~~~~~il 72 (325)
++|+||+||.++++|++ ++. |...+||+++...+ + .++| ++|.... +.. .+|+++|.+.||+..+.+|
T Consensus 4 ~~igIDlGT~~s~v~~~-~~~-~~~~~PS~v~~~~~~~~~~~vG-~~A~~~~~~~~~~~~~~~p~~~g~i~~~~~~~~i~ 80 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLR-GKG-IVVNEPSVIAIDSTTGEILKVG-LEAKNMIGKTPATIKAIRPMRDGVIADYTVALVML 80 (344)
T ss_dssp CEEEEEECSSEEEEEET-TTE-EEEEEESCEEEETTTCCEEEES-HHHHTTTTCCCTTEEEECCEETTEESSHHHHHHHH
T ss_pred ceEEEEcCcCcEEEEEC-CCC-EEEeeCcEEEEecCCCcEEEEc-HHHHHhcccCCCCeEEEecCCCCeeCChHHHHHHH
Confidence 57899999999999999 764 77889999986543 2 4689 8775432 333 4899999999999999999
Q ss_pred HHHHHhccCCC-CCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCC-----ceEEEEEcCCCc
Q 020526 73 HHVLYAGLGWE-EGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGR-----ISGCTVDIGHGK 146 (325)
Q Consensus 73 ~~~~~~~l~~~-~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVdiG~~~ 146 (325)
.+++.+..... . ...+++++.|...+...|+.+.+ ++|.++++.+.++++|.+|+++++. .+.+|||+|+++
T Consensus 81 ~~~l~~~~~~~~~-~~~~~vitvP~~~~~~~r~~~~~-a~~~aG~~~~~li~ep~Aaa~~~~~~~~~~~~~lVvDiGggt 158 (344)
T 1jce_A 81 RYFINKAKGGMNL-FKPRVVIGVPIGITDVERRAILD-AGLEAGASKVFLIEEPMAAAIGSNLNVEEPSGNMVVDIGGGT 158 (344)
T ss_dssp HHHHHHHHTSCCS-CCCEEEEEECTTCCHHHHHHHHH-HHHHTTCSEEEEEEHHHHHHHHTTCCTTSSSCEEEEEECSSC
T ss_pred HHHHHHHhhcccc-CCCeEEEEECCCCCHHHHHHHHH-HHHHcCCCeEeccCCHHHHHHhcCCCCCCCceEEEEEeCCCe
Confidence 99996533323 4 46899999999999999999988 5699999999999999999999986 689999999999
Q ss_pred eEEEEeecCeeccccceeecCcch------h-----ch------h-----hh-cccCC------cceEEC-----CCCc-
Q 020526 147 IDIAPVIEGAVQHIASRRFEVGDE------L-----AY------E-----KT-QKSCE------IEQHTL-----PDGQ- 191 (325)
Q Consensus 147 t~v~pv~~G~~i~~~~~~~~~ge~------~-----~~------~-----~~-~~~~~------~~~~~l-----pd~~- 191 (325)
|.++++..|.++. ....++|.+ . .| . |. ..... ...+.+ .+|.
T Consensus 159 tdvsv~~~~~~~~--~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (344)
T 1jce_A 159 TEVAVISLGSIVT--WESIRIAGDEMDEAIVQYVRETYRVAIGERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLP 236 (344)
T ss_dssp EEEEEEETTEEEE--EEEESCSHHHHHHHHHHHHHHHHCEECCHHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEE
T ss_pred EEEEEEEcCCEEe--eCCCCccChhHHHHHHHHHHHHhCcccCHHHHHHHHHHHhccCccccCCcceEEEeccccCCCCc
Confidence 9999999998764 356777721 0 01 0 00 00000 012333 2453
Q ss_pred -EEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhcc-ccEEEecCCCCccchHHHHHHhhccCCCCc
Q 020526 192 -VIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLL-ENTVLCGGTTSMTGFEDRFQKEAGLCSSAI 269 (325)
Q Consensus 192 -~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~-~nIil~GG~s~~~G~~~rl~~eL~~~~~~~ 269 (325)
.+.++.+++. .+|+|.. ..+.+.|.++|.+++.+++++++ ++|+|+||+|++|||.++|++++ ..
T Consensus 237 ~~~~i~~~~~~---~~~~~~~-----~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~-----~~ 303 (344)
T 1jce_A 237 RKLTLKGGEVR---EALRSVV-----VAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET-----GI 303 (344)
T ss_dssp EEEEEEHHHHH---HHTHHHH-----HHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH-----SS
T ss_pred eeEEEeHHHHH---HHHHHHH-----HHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH-----CC
Confidence 3444444432 3454431 47889999999999999888888 79999999999999999999999 22
Q ss_pred ceEEeCCCCCCCCCCCceeeeehhhhhhc-cCCCC
Q 020526 270 RPTLVKPPEYMPENLTLYSAWIGGAILAK-VVFPQ 303 (325)
Q Consensus 270 ~v~v~~~~~~~~~~~~~~~~W~G~si~a~-l~~~~ 303 (325)
++.+ +++ |.+++|.|+++++. +++|+
T Consensus 304 ~v~~--~~~------p~~ava~Gaa~~a~~~~~~~ 330 (344)
T 1jce_A 304 SVIR--SEE------PLTAVAKGAGMVLDKVNILK 330 (344)
T ss_dssp CEEE--CSS------TTTHHHHHHHHGGGCHHHHT
T ss_pred Cccc--cCC------hHHHHHHHHHHHHhChHHHH
Confidence 3333 334 67999999999998 45553
No 9
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.82 E-value=4.5e-20 Score=164.32 Aligned_cols=236 Identities=16% Similarity=0.141 Sum_probs=155.7
Q ss_pred eEEEEcCCCcEEEeeeCCCCCCcEecccceeecCCCcccccCccccccCceeccccCCeecCHHHHHHHHHHHHHhccCC
Q 020526 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHVLYAGLGW 82 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~d~~~~~~il~~~~~~~l~~ 82 (325)
.++||+||.++|+.+. .++. .. ++. + .. ...|+++|.+.||+..+.+|++++......
T Consensus 30 ~~gIDiGS~s~k~vi~-~~~~-~~-----l~~-------~-~~-------~~~~l~~g~i~d~~~~~~~l~~~~~~~~~~ 87 (272)
T 3h1q_A 30 KVGVDLGTADIVLVVT-DQEG-IP-----VAG-------A-LK-------WASVVKDGLVVDYIGAIQIVRELKAKVERL 87 (272)
T ss_dssp EEEEECCSSEEEEEEE-CTTC-CE-----EEE-------E-EE-------ECCCCBTTBCTTHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcccceEEEEEE-CCCC-cE-----EEE-------E-ee-------cccccCCCEEEcHHHHHHHHHHHHHHHHHh
Confidence 4799999999999887 3322 11 110 0 00 026889999999999999999998653322
Q ss_pred CCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCceEEEEEcCCCceEEEEeecCeeccccc
Q 020526 83 EEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVIEGAVQHIAS 162 (325)
Q Consensus 83 ~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~tglVVdiG~~~t~v~pv~~G~~i~~~~ 162 (325)
.......++++.|.......| +.++.+++.++++...++.++.++++++|..+++|||+|+++|.++++.+|.++..
T Consensus 88 ~~~~~~~~v~tvp~~~~~~~~-~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~~~~viDiGggst~~~~~~~g~~~~~-- 164 (272)
T 3h1q_A 88 LGSELFQAATAIPPGTVGRNA-EACGHVVAGAGLELVTLVDEPVAAARALGINDGIVVDIGGGTTGIAVIEKGKITAT-- 164 (272)
T ss_dssp SSSCCCEEEEECCSCC---CT-THHHHHHHHTTCEEEEEECHHHHHHHHHTCSSEEEEEECSSCEEEEEEETTEEEEE--
T ss_pred cCCccCeEEEEcCCCCCHHHH-HHHHHHHHHcCCeeeecccHHHHHHHHHcCCCEEEEEECCCcEEEEEEECCEEEEE--
Confidence 121335667777766555444 45666889999999999999999999999999999999999999999999998743
Q ss_pred eeecCcch-hch--hhhcc----cCCcceEECCCCcEEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHH
Q 020526 163 RRFEVGDE-LAY--EKTQK----SCEIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENH 235 (325)
Q Consensus 163 ~~~~~ge~-~~~--~~~~~----~~~~~~~~lpd~~~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r 235 (325)
..+++|.. .+. .+... ......-.+.. ..+...+.+.++ ..+.+.|.+.+++++
T Consensus 165 ~~~~~Gg~~~~~~l~~~l~~~~~~ae~~k~~~~~------~~~~~~~~~~~~---------~~i~~~i~~~l~~~~---- 225 (272)
T 3h1q_A 165 FDEPTGGTHLSLVLAGSYKIPFEEAETIKKDFSR------HREIMRVVRPVI---------EKMALIVKEVIKNYD---- 225 (272)
T ss_dssp CCBSCCHHHHHHHHHHHHTCCHHHHHHHHHSSTT------HHHHHHHHHHHH---------HHHHHHHHHHTTTSC----
T ss_pred ecCCCcHHHHHHHHHHHhCCCHHHHHHHHHhcCC------HHHHHHHHHHHH---------HHHHHHHHHHHHhcC----
Confidence 56667722 000 00000 00000000000 000111111222 356666777777665
Q ss_pred HhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhh
Q 020526 236 RQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 297 (325)
Q Consensus 236 ~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a 297 (325)
...+|+|+||+|++|||.++|++++ ...+..+++ |.++.|+|++++|
T Consensus 226 --~~~~ivL~GG~a~~~~l~~~l~~~l-------~~~v~~~~~------p~~a~a~Gaal~a 272 (272)
T 3h1q_A 226 --QTLPVYVVGGTAYLTGFSEEFSRFL-------GKEVQVPIH------PLLVTPLGIALFG 272 (272)
T ss_dssp --SSCCEEEESGGGGSTTHHHHHHHHH-------SSCCBCCSS------GGGHHHHHHHTTC
T ss_pred --CCCEEEEECCccchhhHHHHHHHHh-------CCCccccCC------hHHHHHHHHHhcC
Confidence 2458999999999999999999999 222333444 8899999999875
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=99.76 E-value=2.8e-18 Score=165.90 Aligned_cols=265 Identities=15% Similarity=0.171 Sum_probs=173.9
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEe--------cccceeecCCCcccccCcccccc--------Ccee---cccc---C
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVLEDGSSSVDNSTLVE--------DVTV---DPVV---R 59 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~--------~ps~~~~~~~~~~~g~~~~~~~~--------~~~~---~p~~---~ 59 (325)
++|.||+||.+++++++ .+..|..+ +||.++...++.++| +++.... .+.+ .|++ +
T Consensus 3 ~~iGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG-~~A~~~~~~~p~~~~~~Kr~lg~p~~~~~~ 80 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVL-EGGEVKVIPNPEGNRTTPSVVAFKNGERLVG-EVAKRQAITNPNTIISIKRHMGTDYKVEIE 80 (509)
T ss_dssp CEEEEEECSSEEEEEEE-ETTEEEECCCTTSCSSEECEEEESSSSEEES-HHHHTTTTTCSSEEECGGGTTTSCCCEEET
T ss_pred CEEEEEcCCceEEEEEE-ECCEEEEEECCCCCcccceEEEECCCcEEEC-HHHHHhHHhCCCcHHHHHHhcCCCcEEEEC
Confidence 46899999999999999 77778776 888887644456778 6653321 1111 2665 6
Q ss_pred CeecCHHHHHHHHHHHHHh-------ccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhc
Q 020526 60 GFIRDWDAMEDLLHHVLYA-------GLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAV 132 (325)
Q Consensus 60 g~i~d~~~~~~il~~~~~~-------~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~ 132 (325)
|. +|. .+.++.++|.+ .++ . ....++++.|...+..+|+.+.+. ++..|++.+.++++|.||++++
T Consensus 81 g~--~~~-~~ei~a~~L~~l~~~ae~~l~--~-~~~~~VitvPa~~~~~qr~a~~~a-~~~AGl~~~~li~Ep~AAAlay 153 (509)
T 2v7y_A 81 GK--QYT-PQEISAIILQYLKSYAEDYLG--E-PVTRAVITVPAYFNDAQRQATKDA-GRIAGLEVERIINEPTAAALAY 153 (509)
T ss_dssp TE--EEC-HHHHHHHHHHHHHHHHHHHHT--S-CCCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHT
T ss_pred CE--EEc-HHHHHHHHHHHHHHHHHHHhC--C-CCCeEEEEECCCCCHHHHHHHHHH-HHHcCCCeEEEecCHHHHHHHH
Confidence 64 333 34444444432 222 2 347899999999999999998886 5889999999999999999998
Q ss_pred CC-----ceEEEEEcCCCceEEEEee--cCee-ccccceeecCcch-----------h--------chhh----------
Q 020526 133 GR-----ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGDE-----------L--------AYEK---------- 175 (325)
Q Consensus 133 g~-----~tglVVdiG~~~t~v~pv~--~G~~-i~~~~~~~~~ge~-----------~--------~~~~---------- 175 (325)
|. .+.+|+|+|++++.++.+. +|.. +........+|.. . +...
T Consensus 154 ~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 233 (509)
T 2v7y_A 154 GLDKEEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKD 233 (509)
T ss_dssp TGGGSCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHH
T ss_pred hhccCCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHH
Confidence 75 4789999999999999776 3543 2222334566611 0 0000
Q ss_pred ------h-cccCCcceEECC------CC---cEEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhcc
Q 020526 176 ------T-QKSCEIEQHTLP------DG---QVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLL 239 (325)
Q Consensus 176 ------~-~~~~~~~~~~lp------d~---~~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~ 239 (325)
. ........+.+| +| ..+.++.+.| |.+|+|.. ..+.+.|.++|..+.. .....
T Consensus 234 ~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~-----~~i~~~i~~~L~~a~~--~~~~i 303 (509)
T 2v7y_A 234 AAEKAKKELSGVTQTQISLPFISANENGPLHLEMTLTRAKF---EELSAHLV-----ERTMGPVRQALQDAGL--TPADI 303 (509)
T ss_dssp HHHHHHHHTTTCSEEEEEEEEEEEETTEEEEEEEEEEHHHH---HHHTHHHH-----HTTHHHHHHHHHHHTC--CGGGC
T ss_pred HHHHHHHhcCCCCcEEEEEeccccCCCCCeeEEEEEEHHHH---HHHHHHHH-----HHHHHHHHHHHHHcCC--ChhHC
Confidence 0 000111222222 12 1123332222 33444421 4577888888887753 34557
Q ss_pred ccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhc
Q 020526 240 ENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 298 (325)
Q Consensus 240 ~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~ 298 (325)
++|+|+||+|++|++.+++++.+. ..+..+++ |..++|.||+++|.
T Consensus 304 ~~VvLvGG~s~~p~v~~~l~~~f~-------~~~~~~~~------p~~aVa~Gaa~~a~ 349 (509)
T 2v7y_A 304 DKVILVGGSTRIPAVQEAIKRELG-------KEPHKGVN------PDEVVAIGAAIQGG 349 (509)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHS-------SCCBCCSC------TTTHHHHHHHHHHH
T ss_pred cEEEEECCcccChHHHHHHHHHhC-------CCcCcCCC------chhhhHhhHHHHHH
Confidence 899999999999999999999981 12233444 77999999999986
No 11
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=99.73 E-value=3.2e-17 Score=153.41 Aligned_cols=269 Identities=16% Similarity=0.150 Sum_probs=162.5
Q ss_pred eEEEEcCCCcEEEeeeCCCCCCcEec--------ccceeecCCCcccccCccccc--cCc-------e------------
Q 020526 3 AAVVDAGSKLLKAGPAIPDQAPSMVI--------PSQMKRVLEDGSSSVDNSTLV--EDV-------T------------ 53 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a~gd~~P~~~~--------ps~~~~~~~~~~~g~~~~~~~--~~~-------~------------ 53 (325)
+|.||+||.++++++. .+..|..+. ||.+....++.++| +++... .+. .
T Consensus 20 viGID~GTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG-~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 20 VIGIDLGTTYSCVAVM-KNGKTEILANEQGNRITPSYVAFTDDERLIG-DAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CEEEEECSSEEEEEEE-CSSCEEECCCTTSCSSEECCEEECSSCEEES-HHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred EEEEEeCcCcEEEEEE-ECCeeEEEECCCCCEeeceEEEEeCCcEEec-HHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 4899999999999999 666665442 77776554555666 444211 000 0
Q ss_pred -----ecccc--------------CC--eecC-HHHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHHHH
Q 020526 54 -----VDPVV--------------RG--FIRD-WDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLVQ 108 (325)
Q Consensus 54 -----~~p~~--------------~g--~i~d-~~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~ 108 (325)
.+|.. .| .... -+....+++++.. ..++. .-..++++.|...+...|+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~---~~~~~vitvP~~~~~~~r~~~~~ 174 (394)
T 3qfu_A 98 QKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGT---KVTHAVVTVPAYFNDAQRQATKD 174 (394)
T ss_dssp HHHHTTCSSEEEEETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHhhcCCeEEEcCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCC---CcceEEEEECCCCCHHHHHHHHH
Confidence 01110 11 1111 1233334444322 23332 34789999999999999998887
Q ss_pred HhhhhcCCCeEEEechhhhhhhhcCCc------eEEEEEcCCCceEEEEee--cCeecc-ccceeecCcch-h-------
Q 020526 109 LMFETFNISGFYSSEQAVLSLYAVGRI------SGCTVDIGHGKIDIAPVI--EGAVQH-IASRRFEVGDE-L------- 171 (325)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVdiG~~~t~v~pv~--~G~~i~-~~~~~~~~ge~-~------- 171 (325)
.+ +..+++.+.++++|.||+++++.. +-+|+|+|+++|.++.+. ++..-. .......+|.. .
T Consensus 175 a~-~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~ 253 (394)
T 3qfu_A 175 AG-TIAGLNVLRIVNEPTAAAIAYGLDKSDKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKIVRQ 253 (394)
T ss_dssp HH-HHTTCEEEEEEEHHHHHHHHTTTTSCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHHHH
T ss_pred HH-HHcCCceEEEecCHHHHHHHHhhccCCCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHHHHH
Confidence 76 889999999999999999988643 449999999999887764 332211 11233566611 0
Q ss_pred ---chh------------------------hh-cccCCcceEECC---CCcE--EEecceeeccccccccCCCCCCcCCc
Q 020526 172 ---AYE------------------------KT-QKSCEIEQHTLP---DGQV--IRIGKERYTVGEALFQPSILGLEAHG 218 (325)
Q Consensus 172 ---~~~------------------------~~-~~~~~~~~~~lp---d~~~--i~l~~e~~~~~E~lF~p~~~~~~~~~ 218 (325)
.|. |. ........+.++ ++.. +.+..+.+ |.++.|. ...
T Consensus 254 l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~~~~~~~~i~r~~~---~~~~~~~-----~~~ 325 (394)
T 3qfu_A 254 LIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMSTRIEIDSFVDGIDLSETLTRAKF---EELNLDL-----FKK 325 (394)
T ss_dssp HHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSEEEEEEEEEETTEEEEEEEEHHHH---HHHHHHH-----HHH
T ss_pred HHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCcEEEEEEeccCCceeEEEEEHHHH---HHHHHHH-----HHH
Confidence 000 00 000011112111 2222 22222222 2233331 145
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhc
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 298 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~ 298 (325)
+.+.|.++|+++..+ ....++|+|+||+|++|++.++|++.+. ..++..+++ |..++|.||+++|.
T Consensus 326 i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~------~~~v~~~~~------p~~ava~Gaa~~a~ 391 (394)
T 3qfu_A 326 TLKPVEKVLQDSGLE--KKDVDDIVLVGGSTRIPKVQQLLESYFD------GKKASKGIN------PDEAVAYGAAVQAG 391 (394)
T ss_dssp THHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHTT------TCCCBCCSC------TTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCC--HHHCCEEEEECCccccHHHHHHHHHHcC------CCCCCCCcC------HHHHHHHHHHHHHH
Confidence 777888888876544 4456899999999999999999999881 123334444 78999999999986
Q ss_pred c
Q 020526 299 V 299 (325)
Q Consensus 299 l 299 (325)
+
T Consensus 392 ~ 392 (394)
T 3qfu_A 392 V 392 (394)
T ss_dssp H
T ss_pred h
Confidence 4
No 12
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=99.69 E-value=7.6e-17 Score=150.43 Aligned_cols=270 Identities=16% Similarity=0.162 Sum_probs=165.7
Q ss_pred Cc-eEEEEcCCCcEEEeeeCCCCCCcEe--------cccceeecC-CCcccccCccccc-------------c----Cc-
Q 020526 1 ME-AAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVL-EDGSSSVDNSTLV-------------E----DV- 52 (325)
Q Consensus 1 m~-~vViD~Gs~~~k~G~a~gd~~P~~~--------~ps~~~~~~-~~~~~g~~~~~~~-------------~----~~- 52 (325)
|. .|-||+||.++.+++. .+..|..+ +||.++... ++..+| +++... + .+
T Consensus 1 m~~~vGIDlGTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G-~~A~~~~~~~~~~~~~~~k~~lg~~~~ 78 (383)
T 1dkg_D 1 MGKIIGIDLGTTNSCVAIM-DGTTPRVLENAEGDRTTPSIIAYTQDGETLVG-QPAKRQAVTNPQNTLFAIKRLIGRRFQ 78 (383)
T ss_dssp --CCCEEECCSSEEEEEEE-ETTEEEECCCTTSCSEEECEEEECTTSCEEES-HHHHTTSTTCGGGEEECGGGTTTCBSC
T ss_pred CCcEEEEEcCCCCEEEEEE-ECCeeEEEECCCCCcccceEEEEECCCCEEEC-HHHHHhhhhCccceeehhHHhhCCCCC
Confidence 44 4679999999999998 55445444 677765432 334455 333110 0 00
Q ss_pred --------eecccc-------------CCeecC-HHHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 020526 53 --------TVDPVV-------------RGFIRD-WDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (325)
Q Consensus 53 --------~~~p~~-------------~g~i~d-~~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l~ 107 (325)
..+|+. +|.... .+....+++++.. ..++. ....++++.|...+..+|+.+.
T Consensus 79 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~g~~~~~~~i~~~~L~~l~~~a~~~~~~---~~~~~vitvP~~~~~~~r~~~~ 155 (383)
T 1dkg_D 79 DEEVQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATK 155 (383)
T ss_dssp SHHHHHHTTTCSSEEEECSSSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHSS---CCCEEEECBCTTCCHHHHHHHH
T ss_pred cHHHHHHhhcCCeEEEEcCCCcEEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHH
Confidence 012332 333222 3334445555432 22332 3467999999999999999988
Q ss_pred HHhhhhcCCCeEEEechhhhhhhhcCCc------eEEEEEcCCCceEEEEeecC------eec-cccceeecCcch----
Q 020526 108 QLMFETFNISGFYSSEQAVLSLYAVGRI------SGCTVDIGHGKIDIAPVIEG------AVQ-HIASRRFEVGDE---- 170 (325)
Q Consensus 108 ~~lfe~~~~~~v~~~~~~~~a~~~~g~~------tglVVdiG~~~t~v~pv~~G------~~i-~~~~~~~~~ge~---- 170 (325)
+. ++..+++.+.++.+|.+|+++++.. +.+|||+|+++|.++.+..+ ... .......++|..
T Consensus 156 ~a-~~~aGl~~~~li~Ep~Aaa~~~~~~~~~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~ 234 (383)
T 1dkg_D 156 DA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDS 234 (383)
T ss_dssp HH-HHHTTCEESCCCBHHHHHHHHHTCCC-CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHHHHH
T ss_pred HH-HHHcCCceEEEeccHHHHHHHHHhccCCCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHHHHH
Confidence 86 5889999999999999999988653 68999999999999987644 211 112234567721
Q ss_pred -------hchh------------------------hh-cccCCcceEE------CCCC-c--EEEecceeeccccccccC
Q 020526 171 -------LAYE------------------------KT-QKSCEIEQHT------LPDG-Q--VIRIGKERYTVGEALFQP 209 (325)
Q Consensus 171 -------~~~~------------------------~~-~~~~~~~~~~------lpd~-~--~i~l~~e~~~~~E~lF~p 209 (325)
..+. |. ........+. .++| . .+.++.+.+ |.+|+|
T Consensus 235 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~i~i~~~~~~~~G~~~~~~~it~~~~---~~~~~~ 311 (383)
T 1dkg_D 235 RLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL---ESLVED 311 (383)
T ss_dssp HHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHH---HHHSHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCceEEEEecccccCCCCeeEEEEEeHHHH---HHHHHH
Confidence 0000 00 0000111112 2223 1 123333322 234444
Q ss_pred CCCCCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceee
Q 020526 210 SILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSA 289 (325)
Q Consensus 210 ~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~ 289 (325)
.. ..+.+.|.++|.+++. +....++|+|+||+|++||+.++|++++. ..+..+++ |.+++
T Consensus 312 ~~-----~~i~~~i~~~l~~~~~--~~~~i~~IvL~GG~s~~p~l~~~l~~~~~-------~~v~~~~~------p~~av 371 (383)
T 1dkg_D 312 LV-----NRSIELLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFG-------KEPRKDVN------PDEAV 371 (383)
T ss_dssp HH-----HHHHHHHHHHHHTTTC--CTTTCCEEEEESGGGGSHHHHHHHHHHHS-------SCCBCSSC------TTTHH
T ss_pred HH-----HHHHHHHHHHHHHcCC--CHhhCCEEEEecCccccHHHHHHHHHHhC-------CCCCCCcC------hHHHH
Confidence 21 4688888999988863 34556899999999999999999999991 12333444 78999
Q ss_pred eehhhhhhcc
Q 020526 290 WIGGAILAKV 299 (325)
Q Consensus 290 W~G~si~a~l 299 (325)
|.||+++|.+
T Consensus 372 a~Gaa~~a~~ 381 (383)
T 1dkg_D 372 AIGAAVQGGV 381 (383)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 13
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=99.67 E-value=4.1e-16 Score=146.45 Aligned_cols=270 Identities=17% Similarity=0.180 Sum_probs=160.8
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcE--------ecccceeecCCCcccccCcccccc---------Cc-----------
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSM--------VIPSQMKRVLEDGSSSVDNSTLVE---------DV----------- 52 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~--------~~ps~~~~~~~~~~~g~~~~~~~~---------~~----------- 52 (325)
|..|-||+||.++++++. .+..|.. .+||.+....+..++| +++.... ++
T Consensus 23 ~~viGID~GTt~s~va~~-~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG-~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVF-QHGKVEIIANDQGNRTTPSYVAFTDTERLIG-DAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp CCCEEEEECSSEEEEEEE-ETTEEEECCCTTSCSSEECCEEECSSCEEET-HHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred CCEEEEEcCCccEEEEEE-ECCeeEEEECCCCCcccceEEEECCCCEEec-HHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 678999999999999999 5554543 3467665544455566 5442110 00
Q ss_pred ------eecccc--------------CC---eecCHHHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHH
Q 020526 53 ------TVDPVV--------------RG---FIRDWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQL 106 (325)
Q Consensus 53 ------~~~p~~--------------~g---~i~d~~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l 106 (325)
..+|.. .| .+.-.+....+++++.. ..++. .-..++++.|...+...|+.+
T Consensus 101 ~~~~~~~~~p~~~~~~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~ 177 (404)
T 3i33_A 101 TVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGG---KVHSAVITVPAYFNDSQRQAT 177 (404)
T ss_dssp HHHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSS---CCCEEEEEECTTCCHHHHHHH
T ss_pred HHHHHHhhCCceEEccCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhcc---CCCcEEEEECCCCCHHHHHHH
Confidence 011210 01 11112233344444322 23333 336899999999999999888
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhcCCc---------eEEEEEcCCCceEEEEee--cCee-ccccceeecCcch----
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAVGRI---------SGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGDE---- 170 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~g~~---------tglVVdiG~~~t~v~pv~--~G~~-i~~~~~~~~~ge~---- 170 (325)
.+. ++..+++.+.++++|.||+++++.. +-+|+|+|+++|.++.+. +|.. +........+|..
T Consensus 178 ~~a-~~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 256 (404)
T 3i33_A 178 KDA-GTITGLNVLRIINEPTAAAIAYGLDKKGCAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 256 (404)
T ss_dssp HHH-HHHHTCEEEEEEEHHHHHHHHTTTTSSCSSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHH-HHHcCCCeEEEeccHHHHHHHHHhhcccccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHH
Confidence 776 6889999999999999999988643 349999999999998774 3322 2222333566611
Q ss_pred -------hchhh------------------------h-cccCCcceEECC---CCcE--EEecceeeccccccccCCCCC
Q 020526 171 -------LAYEK------------------------T-QKSCEIEQHTLP---DGQV--IRIGKERYTVGEALFQPSILG 213 (325)
Q Consensus 171 -------~~~~~------------------------~-~~~~~~~~~~lp---d~~~--i~l~~e~~~~~E~lF~p~~~~ 213 (325)
..+.+ . ........+.++ ++.. +.+..+.+ |.++.|.
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~~~~~~~~~~~g~~~~~~i~r~~~---~~~~~~~--- 330 (404)
T 3i33_A 257 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGVDFYTSITRARF---EELNADL--- 330 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEETTEEEEEEEEHHHH---HHHTHHH---
T ss_pred HHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcceEEEEeeccCCceeEEEEcHHHH---HHHHHHH---
Confidence 00000 0 000011111111 2221 22222211 2233221
Q ss_pred CcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeeh
Q 020526 214 LEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIG 292 (325)
Q Consensus 214 ~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G 292 (325)
...+.+.|.++|+.+..+ ....+.|+|+||+|++|++.++|++.+ .. .+..+.+ |..+++.|
T Consensus 331 --~~~i~~~i~~~l~~~~~~--~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~-------~v~~~~~------p~~ava~G 393 (404)
T 3i33_A 331 --FRGTLEPVEKALRDAKLD--KGQIQEIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSIN------PDEAVAYG 393 (404)
T ss_dssp --HHHTHHHHHHHHHHHTCC--GGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCSSC------TTTHHHHH
T ss_pred --HHHHHHHHHHHHHHcCCC--HhhCCEEEEECCccccHHHHHHHHHHcCCC-------CCCCCcC------HHHHHHHH
Confidence 135667777777765432 345688999999999999999999888 32 2333444 78999999
Q ss_pred hhhhhcc
Q 020526 293 GAILAKV 299 (325)
Q Consensus 293 ~si~a~l 299 (325)
|+++|.+
T Consensus 394 aa~~a~~ 400 (404)
T 3i33_A 394 AAVQAAI 400 (404)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
No 14
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=99.47 E-value=7.4e-13 Score=129.13 Aligned_cols=268 Identities=16% Similarity=0.150 Sum_probs=159.1
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCc--------EecccceeecCCCcccccCccccc-------------c----Cce---
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPS--------MVIPSQMKRVLEDGSSSVDNSTLV-------------E----DVT--- 53 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~--------~~~ps~~~~~~~~~~~g~~~~~~~-------------~----~~~--- 53 (325)
..|-||+||.++.+++. .+..|. ..+||+++...+...+| ++|... + .+.
T Consensus 5 ~~iGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG-~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 82 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVF-QHGKVEIIANDQGNRTTPSYVAFTDTERLIG-DAAKNQVAMNPTNTVFDAKRLIGRRFDDAV 82 (554)
T ss_dssp CCEEEEECSSEEEEEEE-CSSSEEECCCTTSCSEEECCEEECSSCEEET-HHHHTTTTTCGGGEECCGGGTTTCCSSCSH
T ss_pred CEEEEEeCcccEEEEEE-ECCEEEEEECCCCCeecceEEEEcCCcEEEc-HHHHHhhhhChhhehHhhHHhcCCCCCcHH
Confidence 47899999999999998 544343 23477776544445666 443210 0 000
Q ss_pred ------ecccc----CCee------------cC-HHHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHHH
Q 020526 54 ------VDPVV----RGFI------------RD-WDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLV 107 (325)
Q Consensus 54 ------~~p~~----~g~i------------~d-~~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l~ 107 (325)
.+|.. +|.. .. .+....+|+++.. ..++.. -..++++.|...+..+|+.+.
T Consensus 83 v~~~~~~~p~~v~~~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~---v~~~VitVPa~f~~~qr~a~~ 159 (554)
T 1yuw_A 83 VQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKT---VTNAVVTVPAYFNDSQRQATK 159 (554)
T ss_dssp HHHHHTTCSSEEEEETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSC---CCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHhhcCCeEEEecCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCC---CCeEEEEECCCCCHHHHHHHH
Confidence 01211 2210 11 2233344444432 234432 367999999999999998887
Q ss_pred HHhhhhcCCCeEEEechhhhhhhhcCC-------ceEEEEEcCCCceEEEEee--cCee-ccccceeecCcch------h
Q 020526 108 QLMFETFNISGFYSSEQAVLSLYAVGR-------ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGDE------L 171 (325)
Q Consensus 108 ~~lfe~~~~~~v~~~~~~~~a~~~~g~-------~tglVVdiG~~~t~v~pv~--~G~~-i~~~~~~~~~ge~------~ 171 (325)
+ +++..|++.+.++++|.||++++|. .+.+|+|+|++++.++.+. +|.. +........+|.. .
T Consensus 160 ~-A~~~AGl~~~~li~EP~AAAlay~~~~~~~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l~ 238 (554)
T 1yuw_A 160 D-AGTIAGLNVLRIINEPTAAAIAYGLDKKVGAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFDNRMV 238 (554)
T ss_dssp H-HHHTTTCEEEEEEEHHHHHHHHTTCSTTCSSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHHH
T ss_pred H-HHHHcCCCeEEEeCcHHHHHHHHHhhccCCCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHHHHHH
Confidence 7 5588999999999999999998863 4679999999999999876 5653 2223334556611 0
Q ss_pred ch-----hh------------------------h-cccCCcceEECC---CCc--EEEecceeeccccccccCCCCCCcC
Q 020526 172 AY-----EK------------------------T-QKSCEIEQHTLP---DGQ--VIRIGKERYTVGEALFQPSILGLEA 216 (325)
Q Consensus 172 ~~-----~~------------------------~-~~~~~~~~~~lp---d~~--~i~l~~e~~~~~E~lF~p~~~~~~~ 216 (325)
+| .+ . ........+.++ +|. .+.+..+.+ |.++.|. .
T Consensus 239 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~~~i~i~~~~~g~~~~~~ltr~~~---e~l~~~~-----~ 310 (554)
T 1yuw_A 239 NHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQASIEIDSLYEGIDFYTSITRARF---EELNADL-----F 310 (554)
T ss_dssp HHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSEEEEEETTCSSSCCEEEEEEHHHH---HHHTHHH-----H
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCceEEEEEeeccCCceEEEEEEHHHH---HHHHHHH-----H
Confidence 00 00 0 000011122222 222 122222221 2223221 0
Q ss_pred CcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhh
Q 020526 217 HGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAI 295 (325)
Q Consensus 217 ~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si 295 (325)
..+.+.|.++++.+. +...-.+.|+|+||+|.+|++.+++++.+ .. .+..+.+ |..+.+.||++
T Consensus 311 ~~i~~~i~~~L~~a~--~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~-------~v~~~~n------p~~aVA~Gaa~ 375 (554)
T 1yuw_A 311 RGTLDPVEKALRDAK--LDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGK-------ELNKSIN------PDEAVAYGAAV 375 (554)
T ss_dssp HHTTHHHHHHHHHTT--CCGGGCCEEEEESGGGGCHHHHHHHHHHTTTC-------CCBCCSC------TTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC--CChhhCcEEEEECCcccChHHHHHHHHHcCCC-------ccccCCC------chhHHHHHHHH
Confidence 234556677776653 22334688999999999999999999888 32 2223344 77899999999
Q ss_pred hhc
Q 020526 296 LAK 298 (325)
Q Consensus 296 ~a~ 298 (325)
+|.
T Consensus 376 ~a~ 378 (554)
T 1yuw_A 376 QAA 378 (554)
T ss_dssp HHH
T ss_pred HHH
Confidence 986
No 15
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=99.43 E-value=1.5e-12 Score=128.18 Aligned_cols=268 Identities=16% Similarity=0.183 Sum_probs=159.8
Q ss_pred eEEEEcCCCcEEEeeeCCCCCCcEe--------cccceeecC-CCcccccCccccc-------------c----Cc----
Q 020526 3 AAVVDAGSKLLKAGPAIPDQAPSMV--------IPSQMKRVL-EDGSSSVDNSTLV-------------E----DV---- 52 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a~gd~~P~~~--------~ps~~~~~~-~~~~~g~~~~~~~-------------~----~~---- 52 (325)
.|-||+||.++.+++. .+..|..+ .||+++... +...+| +.|... + .+
T Consensus 4 viGIDlGTt~s~va~~-~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG-~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 4 IIGIDLGTTNSCVAIM-DGTTPRVLENAEGDRTTPSIIAYTQDGETLVG-QPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CEEEECCSSEEEEEEE-ETTEEEECCCTTSCSSEECEEEECTTSCEEES-HHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred EEEEEcCCcCEEEEEE-ECCEEEEEECCCCCcccceEEEEECCCcEEEC-HHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 5789999999999998 55455544 677765522 334556 433110 0 00
Q ss_pred -----eecccc-------------CCeecCH-HHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHHHHHh
Q 020526 53 -----TVDPVV-------------RGFIRDW-DAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLVQLM 110 (325)
Q Consensus 53 -----~~~p~~-------------~g~i~d~-~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~l 110 (325)
..+|++ +|..... +....+|+++.. ..++. .-..++++.|...+..+|+.+.+.+
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~~g~~~~~~ei~a~~L~~l~~~ae~~l~~---~v~~~VitVPa~f~d~qr~a~~~A~ 158 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEVKGQKMAPPQISAEVLKKMKKTAEDYLGE---PVTEAVITVPAYFNDAQRQATKDAG 158 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEETTEEECHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEECCEEEcHHHHHHHHHHHHHHHHHHHhCC---CCcEEEEEECCCCCHHHHHHHHHHH
Confidence 012332 3332222 233344444332 23443 2367899999999999998887764
Q ss_pred hhhcCCCeEEEechhhhhhhhcCC------ceEEEEEcCCCceEEEEeec------Cee-ccccceeecCcch------h
Q 020526 111 FETFNISGFYSSEQAVLSLYAVGR------ISGCTVDIGHGKIDIAPVIE------GAV-QHIASRRFEVGDE------L 171 (325)
Q Consensus 111 fe~~~~~~v~~~~~~~~a~~~~g~------~tglVVdiG~~~t~v~pv~~------G~~-i~~~~~~~~~ge~------~ 171 (325)
+..|+..+.++++|.||++++|. .+.+|+|+|++++.++.+.- |.. +........+|.. .
T Consensus 159 -~~AGl~v~~li~EP~AAAlay~l~~~~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~ 237 (605)
T 2kho_A 159 -RIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLI 237 (605)
T ss_dssp -HTTTCEEEEEEEHHHHHHHHTTTTSSSSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHH
T ss_pred -HHcCCceEEEecCHHHHHHHhhhcccCCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHH
Confidence 77899999999999999998864 24699999999999998863 432 1112233456621 0
Q ss_pred -----chhh------------------------h-cccCCcceEECC------CC-c--EEEecceeeccccccccCCCC
Q 020526 172 -----AYEK------------------------T-QKSCEIEQHTLP------DG-Q--VIRIGKERYTVGEALFQPSIL 212 (325)
Q Consensus 172 -----~~~~------------------------~-~~~~~~~~~~lp------d~-~--~i~l~~e~~~~~E~lF~p~~~ 212 (325)
.|.+ . ........+.+| +| . .+.+..+.| |.++.|..
T Consensus 238 ~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~~~i~l~~~~~~~~G~~~~~~~itr~~f---e~l~~~~~- 313 (605)
T 2kho_A 238 NYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQTDVNLPYITADATGPKHMNIKVTRAKL---ESLVEDLV- 313 (605)
T ss_dssp HHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSEEEEEEEEEEEETTEEEEEEEEEEHHHH---HTTCCSTT-
T ss_pred HHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCceEEEecccccCCCCceEEEEEEeHHHH---HHHHHHHH-
Confidence 0000 0 000011112221 12 1 112222222 33444421
Q ss_pred CCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeeh
Q 020526 213 GLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIG 292 (325)
Q Consensus 213 ~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G 292 (325)
..+.+.|.++|..... ...-...|+|+||+|.+|++.+++++.+.. .+....+ |..+++.|
T Consensus 314 ----~~i~~~i~~~L~~a~~--~~~~i~~VvLvGG~srip~v~~~l~~~fg~-------~~~~~~n------pd~aVA~G 374 (605)
T 2kho_A 314 ----NRSIEPLKVALQDAGL--SVSDIDDVILVGGQTRMPMVQKKVAEFFGK-------EPRKDVN------PDEAVAIG 374 (605)
T ss_dssp ----GGGTSHHHHHHHTTTC--CTTTCSEEEEESGGGGSHHHHHHHHHHHSS-------CCBCSSC------TTTHHHHH
T ss_pred ----HHHHHHHHHHHHHcCC--ChhhCceEEEECCcccChHHHHHHHHhcCC-------CcCcCCC------cchHHHHH
Confidence 4577788888887652 233457899999999999999999988821 1223334 67899999
Q ss_pred hhhhhcc
Q 020526 293 GAILAKV 299 (325)
Q Consensus 293 ~si~a~l 299 (325)
|+++|..
T Consensus 375 Aa~~a~~ 381 (605)
T 2kho_A 375 AAVQGGV 381 (605)
T ss_dssp HHHHHTT
T ss_pred HHHHHHH
Confidence 9999874
No 16
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=99.42 E-value=1.9e-12 Score=128.74 Aligned_cols=269 Identities=11% Similarity=0.088 Sum_probs=159.1
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcE--------ecccceeecCCCcccccCcccc-------------cc-------C-
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSM--------VIPSQMKRVLEDGSSSVDNSTL-------------VE-------D- 51 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~--------~~ps~~~~~~~~~~~g~~~~~~-------------~~-------~- 51 (325)
|..|-||+||.++.+++. ....|.. .+||+++...+...+| +.|.. ++ +
T Consensus 2 m~~iGIDlGTtns~va~~-~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG-~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 79 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVA-RNRGIDIVVNEVSNRSTPSVVGFGPKNRYLG-ETGKNKQTSNIKNTVANLKRIIGLDYHHP 79 (675)
T ss_dssp CCCEEEECCSSEEEEEEE-ETTEEEEECCTTSCSSEECCEEECSSSEEET-HHHHHHHTTCGGGEECCHHHHTTCBTTCT
T ss_pred CcEEEEEcCCCcEEEEEE-ECCeeEEEECCCCCcccceEEEECCCcEEec-HHHHHhhhhChHhHHHHHHHHhCCCCCcH
Confidence 678999999999999997 4433433 3477776544445566 44411 00 0
Q ss_pred ----------ceeccccCCeec-------------CHHHHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHH
Q 020526 52 ----------VTVDPVVRGFIR-------------DWDAMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQ 105 (325)
Q Consensus 52 ----------~~~~p~~~g~i~-------------d~~~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~ 105 (325)
+.+.+..+|.+. -.+....+|+++.. ..++.. -..++++.|...+..+|+.
T Consensus 80 ~v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~---v~~~VITVPa~f~~~qR~a 156 (675)
T 3d2f_A 80 DFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKAN---ITDVCIAVPPWYTEEQRYN 156 (675)
T ss_dssp THHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSC---CCEEEEEECTTCCHHHHHH
T ss_pred HHHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCC---cceEEEEECCCCCHHHHHH
Confidence 001122244321 12233344444322 234432 3579999999999999998
Q ss_pred HHHHhhhhcCCCeEEEechhhhhhhhcCC------------ceEEEEEcCCCceEEEEee--cCee-ccccceeecCcch
Q 020526 106 LVQLMFETFNISGFYSSEQAVLSLYAVGR------------ISGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGDE 170 (325)
Q Consensus 106 l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------------~tglVVdiG~~~t~v~pv~--~G~~-i~~~~~~~~~ge~ 170 (325)
+.+.+ +..|++.+.++++|.||++++|. .+.+|+|+|++++.++.+. +|.. +........+|..
T Consensus 157 ~~~Aa-~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~ 235 (675)
T 3d2f_A 157 IADAA-RIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGR 235 (675)
T ss_dssp HHHHH-HHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHH
T ss_pred HHHHH-HHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHH
Confidence 88754 77899999999999999987642 4579999999999998875 5654 2323334566621
Q ss_pred ------hc-----hhh------------------------h-cccCCcceEECC---CCc--EEEecceeeccccccccC
Q 020526 171 ------LA-----YEK------------------------T-QKSCEIEQHTLP---DGQ--VIRIGKERYTVGEALFQP 209 (325)
Q Consensus 171 ------~~-----~~~------------------------~-~~~~~~~~~~lp---d~~--~i~l~~e~~~~~E~lF~p 209 (325)
.+ |.+ . ........+.++ ++. .+.+..+.| |-++.|
T Consensus 236 d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~~~~i~i~~~~~g~~~~~~itr~~f---e~l~~~ 312 (675)
T 3d2f_A 236 DFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANTNAPFSVESVMNDVDVSSQLSREEL---EELVKP 312 (675)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCSEEEEEETTSSSSCCEEEEEEHHHH---HHHTHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCCceEEEEeeeccCceEEEEEeHHHH---HHHHHH
Confidence 00 000 0 000011112222 121 222222222 222222
Q ss_pred CCCCCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceee
Q 020526 210 SILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSA 289 (325)
Q Consensus 210 ~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~ 289 (325)
. ...+.+.|.+++...... ..-...|+|+||+|.+|++.+++++.+. ..+....+ |..++
T Consensus 313 l-----~~~i~~~i~~~L~~a~l~--~~~I~~VvLvGGssriP~v~~~l~~~fg-------~~~~~~~n------PdeaV 372 (675)
T 3d2f_A 313 L-----LERVTEPVTKALAQAKLS--AEEVDFVEIIGGTTRIPTLKQSISEAFG-------KPLSTTLN------QDEAI 372 (675)
T ss_dssp H-----HTTTTHHHHHHHHHHTCC--GGGCCEEEEESGGGGSHHHHHHHHHHHT-------SCEECCSC------TTTHH
T ss_pred H-----HHHHHHHHHHHHHHhCCC--hhhCcEEEEECCCccChHHHHHHHHhcC-------CCccccCC------cchHH
Confidence 1 134566677777654321 1234789999999999999999998881 12333444 77899
Q ss_pred eehhhhhhc
Q 020526 290 WIGGAILAK 298 (325)
Q Consensus 290 W~G~si~a~ 298 (325)
..||+++|.
T Consensus 373 A~GAa~~a~ 381 (675)
T 3d2f_A 373 AKGAAFICA 381 (675)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999999986
No 17
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.35 E-value=1.4e-12 Score=119.87 Aligned_cols=156 Identities=17% Similarity=0.171 Sum_probs=112.4
Q ss_pred CceEEEEcCCCcEEEeeeCCCCCCcEecccceeecCCC------------------------cccccCccccccCceecc
Q 020526 1 MEAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLED------------------------GSSSVDNSTLVEDVTVDP 56 (325)
Q Consensus 1 m~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~~------------------------~~~g~~~~~~~~~~~~~p 56 (325)
|-.|-||+|+.++|+-.. + .-...+||.++...+. +.+| +++ ++|
T Consensus 21 m~~igiDlG~~~tkv~~~--~-g~~~~~PSvva~~~~~~~~~~~~~~v~~~~g~~~~~~~~~~~vG-~~A-------~~~ 89 (346)
T 2fsj_A 21 MVVVGLDVGYGDTKVIGV--D-GKRIIFPSRWAVTETESWGIGGKIPVLSTDGGQTKFIYGKYASG-NNI-------RVP 89 (346)
T ss_dssp CEEEEEEECSSEEEEECG--G-GCEEEEESCEEEECCSCC----CCCCBBSSTTSSEEEEGGGCCS-SCC-------BCC
T ss_pred eEEEEEecCCcceeEEec--C-CCEEEecceeeeccccccCcCcceEEEEecccccccCCcEEEEc-cce-------ecc
Confidence 556899999999998543 3 3456789988653221 2234 332 379
Q ss_pred ccCCeecCHHHHHHHHHHHHHhccCCCCCCCceEE--EEcCCCCCHHHHHHHHHHhhhh-------------cCCCeEEE
Q 020526 57 VVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQIL--FTDPLCSPKAVREQLVQLMFET-------------FNISGFYS 121 (325)
Q Consensus 57 ~~~g~i~d~~~~~~il~~~~~~~l~~~~~~~~~vl--l~~~~~~~~~~r~~l~~~lfe~-------------~~~~~v~~ 121 (325)
+++|.+.| +..+.++.+.+.+...........++ ++.|......+|+.+.+.+... +++..+.+
T Consensus 90 l~~~~~~~-~~~~~ll~~~l~~~~~~~~~~~~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~l 168 (346)
T 2fsj_A 90 QGDGRLAS-KEAFPLIAAALWESGIHNDGSPVDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIM 168 (346)
T ss_dssp SSTTCTTS-TTTHHHHHHHHHHHCCCC---CEEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEE
T ss_pred cCCCcccC-hhHHHHHHHHHHHhhhccCCCceEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEE
Confidence 99999999 78888888888764311111345688 8999877778888887775542 23577999
Q ss_pred echhhhhhhhc--C-----C-ceEEEEEcCCCceEEEEee--cCeeccccceeecCc
Q 020526 122 SEQAVLSLYAV--G-----R-ISGCTVDIGHGKIDIAPVI--EGAVQHIASRRFEVG 168 (325)
Q Consensus 122 ~~~~~~a~~~~--g-----~-~tglVVdiG~~~t~v~pv~--~G~~i~~~~~~~~~g 168 (325)
+++|.+|++++ + . .+-+|||+|+++|.++.+. +|.++......+++|
T Consensus 169 i~Ep~AAa~~~l~~~~~~~~~~~vlVvDIGgGTtDv~vi~~~~g~~v~~~s~~~~lG 225 (346)
T 2fsj_A 169 RPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIG 225 (346)
T ss_dssp EETTHHHHHHHHHHTSSCCCSSEEEEEEECSSCEEEEEEETTTTEECGGGCEEESCC
T ss_pred EccHHHHHHHhhccccccccCCcEEEEECCCCcEEEEEEEecCCEEEeecCCCcchh
Confidence 99999999974 2 1 3459999999999999998 787666556777888
No 18
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=99.32 E-value=3.7e-12 Score=119.64 Aligned_cols=215 Identities=13% Similarity=0.148 Sum_probs=126.7
Q ss_pred HHHHHHHHHHH---hccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCCc--------
Q 020526 67 AMEDLLHHVLY---AGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGRI-------- 135 (325)
Q Consensus 67 ~~~~il~~~~~---~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~~-------- 135 (325)
....+++++.. ..++. ....++++.|...+...|+.+.+.+ +..++..+.++.+|.+|+++++..
T Consensus 130 v~~~~L~~l~~~a~~~~~~---~~~~~vitvPa~~~~~~r~~~~~a~-~~AGl~~~~li~Ep~AAa~~~~~~~~~~~~~~ 205 (409)
T 4gni_A 130 IATRYLRRLVGAASEYLGK---KVTSAVITIPTNFTEKQKAALIAAA-AAADLEVLQLISEPAAAVLAYDARPEATISDK 205 (409)
T ss_dssp HHHHHHHHHHHHHHHHHTS---CCCEEEEEECTTCCHHHHHHHHHHH-HHTTCEEEEEEEHHHHHHHHTTC------CCE
T ss_pred HHHHHHHHHHHHHHHHhCC---CCCeEEEEECCCCCHHHHHHHHHHH-HHcCCCeEEEEcCHHHHHHHHhcccccCCCCC
Confidence 44455555433 23332 3467999999999998888876654 778999999999999999998754
Q ss_pred eEEEEEcCCCceEEEEee--cCee-ccccceeecCcch-----------hchhh--------------------hc----
Q 020526 136 SGCTVDIGHGKIDIAPVI--EGAV-QHIASRRFEVGDE-----------LAYEK--------------------TQ---- 177 (325)
Q Consensus 136 tglVVdiG~~~t~v~pv~--~G~~-i~~~~~~~~~ge~-----------~~~~~--------------------~~---- 177 (325)
+.+|+|+|+++|.++.+. +|.. +........+|.. ..|.+ ..
T Consensus 206 ~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K 285 (409)
T 4gni_A 206 IIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTK 285 (409)
T ss_dssp EEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHH
Confidence 479999999999998753 3321 1111123566611 00100 00
Q ss_pred ---ccCCcceEECC---CCcE--EEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhccccEEEecCCC
Q 020526 178 ---KSCEIEQHTLP---DGQV--IRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQLLENTVLCGGTT 249 (325)
Q Consensus 178 ---~~~~~~~~~lp---d~~~--i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s 249 (325)
.......+.++ ++.. +.++.+.+ |.+++|. ...+.++|.+.|++... .....+.|+|+||+|
T Consensus 286 ~~ls~~~~~~i~i~~~~~~~~~~~~itr~~~---~~~~~~~-----~~~i~~~i~~~l~~~~~--~~~~i~~V~LvGG~s 355 (409)
T 4gni_A 286 RALSRSTNASFSVESLIDGLDFASTINRLRY---ETIARTV-----FEGFNRLVESAVKKAGL--DPLDVDEVIMSGGTS 355 (409)
T ss_dssp HHHHHSSEEEEEEEEEETTEEEEEEEEHHHH---HHHTHHH-----HHHHHHHHHHHHHHTTC--CGGGCCEEEEESGGG
T ss_pred HhCCCCCceEEEeecccCCcceEEEeeHHHH---HHHHHHH-----HHHHHHHHHHHHHHcCC--CHHHCCEEEEECCcc
Confidence 00001111111 1221 11211111 2233332 14566777777776532 233457899999999
Q ss_pred CccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhccC
Q 020526 250 SMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKVV 300 (325)
Q Consensus 250 ~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l~ 300 (325)
.+|++.++|++.+ ...+++..+........|..+.=.||++++...
T Consensus 356 ~~p~v~~~l~~~f-----~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~ 401 (409)
T 4gni_A 356 NTPRIAANFRYIF-----PESTRILAPSTDPSALNPSELQARGAALQASLI 401 (409)
T ss_dssp GCHHHHHHHHHHS-----CTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHc-----CCccccccccccCCCcCHHHHHHHHHHHHhhhh
Confidence 9999999999888 223345322110011127788889999998863
No 19
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.28 E-value=3.6e-11 Score=111.63 Aligned_cols=143 Identities=13% Similarity=0.133 Sum_probs=86.5
Q ss_pred HhhhhcCCCeEEEechhhhhhhhcC------C-ceEEEEEcCCCceEEEEeecCeeccccceeecCcch-----------
Q 020526 109 LMFETFNISGFYSSEQAVLSLYAVG------R-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGDE----------- 170 (325)
Q Consensus 109 ~lfe~~~~~~v~~~~~~~~a~~~~g------~-~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~ge~----------- 170 (325)
-+++..|+.-..++.+|++++.+++ . ...+|||+|+++|.++.+.+|.++.. ..+++|..
T Consensus 158 ~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~~~~~~~~vvDiGggttdi~i~~~g~~~~~--~~~~~GG~~i~~~i~~~~~ 235 (377)
T 2ych_A 158 EALRGAGLVPVVLDVKPFAGLYPLEARLAEEPDRVFLVLDIGAESTSLVLLRGDKPLAV--RVLTLSGKDFTEAIARSFN 235 (377)
T ss_dssp HHHHHTTCEEEEEEEHHHHTTGGGHHHHHTSTTCEEEEEEECSSCEEEEEEETTEEEEE--EEESCSHHHHHHHHHHHTT
T ss_pred HHHHHCCCceEEEecchHHHHHHHHhhcccccCCeEEEEEECCCcEEEEEEECCEEEEE--EeeechHHHHHHHHHHHhC
Confidence 3458899999999999999998864 2 34599999999999999999988753 56677722
Q ss_pred hchhhhc-----ccC-------CcceEECCCCcEEEecceeeccccccccCCCCCCcCCcHHHHHHHHHHhCChHHHHhc
Q 020526 171 LAYEKTQ-----KSC-------EIEQHTLPDGQVIRIGKERYTVGEALFQPSILGLEAHGIVEQLVHTISTVSSENHRQL 238 (325)
Q Consensus 171 ~~~~~~~-----~~~-------~~~~~~lpd~~~i~l~~e~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~~~~d~r~~l 238 (325)
.++...+ ... ....+.+++ ..+.++.+. ..|+ .+|. ...+.+.|.+++..++...+...
T Consensus 236 ~~~~~aE~~K~~~~~~~~~~~~~~~~i~~~~-~~~~i~~~~--~~~~-i~~~-----~~~i~~~i~~~l~~~~~~~~~~~ 306 (377)
T 2ych_A 236 LDLLAAEEVKRTYGMATLPTEDEELLLDFDA-ERERYSPGR--IYDA-IRPV-----LVELTQELRRSLEFFRIQLEEAS 306 (377)
T ss_dssp CCHHHHHHHHHHTC--------------------------C--HHHH-HHHH-----HHHHHHHHHHHHHHHHHHC---C
T ss_pred CCHHHHHHHHhhccccccccccccccccccc-ccccCCHHH--HHHH-HHHH-----HHHHHHHHHHHHHHHHhccCCCC
Confidence 0111000 000 000111211 111121111 1111 1111 13466677777776655566678
Q ss_pred cccEEEecCCCCccchHHHHHHhh
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL 262 (325)
.++|+|+||+|++||+.+++++.+
T Consensus 307 ~~~IvL~GG~s~~p~l~~~l~~~l 330 (377)
T 2ych_A 307 PEVGYLLGGGSKLRGLASLLTDTL 330 (377)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHH
T ss_pred cCEEEEECccccchhHHHHHHHHh
Confidence 889999999999999999999999
No 20
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=99.13 E-value=2.5e-10 Score=112.35 Aligned_cols=68 Identities=16% Similarity=0.084 Sum_probs=57.1
Q ss_pred CceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCC------ceEEEEEcCCCceEEEEeecC
Q 020526 87 EGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAVGR------ISGCTVDIGHGKIDIAPVIEG 155 (325)
Q Consensus 87 ~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~------~tglVVdiG~~~t~v~pv~~G 155 (325)
-..++++.|...+..+|+.+.+. .+..|++.+.++++|.||++++|. .+-+|+|+|++++.++.+.-+
T Consensus 135 v~~~VITVPa~f~~~qr~a~~~A-a~~AGl~v~~li~EP~AAAlaygl~~~~~~~~vlV~DlGGGT~Dvsi~~~~ 208 (605)
T 4b9q_A 135 VTEAVITVPAYFNDAQRQATKDA-GRIAGLEVKRIINEPTAAALAYGLDKGTGNRTIAVYDLGGGAFDISIIEID 208 (605)
T ss_dssp CCEEEEEECTTCCHHHHHHHHHH-HHHTTCEEEEEEEHHHHHHHHHHTTSCCSSEEEEEEEECSSCEEEEEEEEE
T ss_pred CCeEEEEECCCCCHHHHHHHHHH-HHHcCCceEEEeCcHHHHHHHhhhhccCCCCEEEEEECCCCeEEEEEEEEe
Confidence 36789999999999998776655 477899999999999999998853 456899999999999987543
No 21
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=98.86 E-value=8.5e-08 Score=90.06 Aligned_cols=182 Identities=15% Similarity=0.106 Sum_probs=105.4
Q ss_pred HHHHHHHHHhhhhcCCCeEEEechhhhhhhhcCC-----ceEEEEEcCCCceEEEEeecCeeccccceeecCcch-----
Q 020526 101 AVREQLVQLMFETFNISGFYSSEQAVLSLYAVGR-----ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVGDE----- 170 (325)
Q Consensus 101 ~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~g~-----~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~ge~----- 170 (325)
...+.+.++ ++..++.-..++.+|+||+++... .+.+|||+|+++|.++.+.+|.++.. ..+++|.+
T Consensus 168 ~~v~n~~~~-~~~AGL~v~~lv~ep~Aaa~a~l~~~~~~~gv~vvDiGggttdisi~~~g~~~~~--~~i~~GG~~it~d 244 (419)
T 4a2a_A 168 KVYEMFYNF-LQDTVKSPFQLKSSLVSTAEGVLTTPEKDRGVVVVNLGYNFTGLIAYKNGVPIKI--SYVPVGMKHVIKD 244 (419)
T ss_dssp HHHHHHHHH-HHTTSCSCEEEEEHHHHHHHHHCCHHHHHHCEEEEEECSSSEEEEEEETTEEEEE--EEESCCHHHHHHH
T ss_pred HHHHHHHHH-HHHcCCcEEEEEEHHHHHHHHhhccccccCCEEEEEECCCcEEEEEEECCEEEEE--EecccHHHHHHHH
Confidence 344444444 577899999999999999998764 36799999999999999999998764 46677722
Q ss_pred ------hchh------hhccc-----CCcceEECCC--C-cEEEecce-eeccccccccCCCCCCcCCcHHHHHHHHHHh
Q 020526 171 ------LAYE------KTQKS-----CEIEQHTLPD--G-QVIRIGKE-RYTVGEALFQPSILGLEAHGIVEQLVHTIST 229 (325)
Q Consensus 171 ------~~~~------~~~~~-----~~~~~~~lpd--~-~~i~l~~e-~~~~~E~lF~p~~~~~~~~~i~~~I~~~i~~ 229 (325)
..++ ..... .....++++. + ....++.+ ...+.+..+ ..+.+.|.+.|+.
T Consensus 245 Ia~~l~~~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~~~~~~~is~~~l~~ii~p~v---------eei~~~V~~~L~~ 315 (419)
T 4a2a_A 245 VSAVLDTSFEESERLIITHGNAVYNDLKEEEIQYRGLDGNTIKTTTAKKLSVIIHARL---------REIMSKSKKFFRE 315 (419)
T ss_dssp HHHHHTCCHHHHHHHHHHHCCSCCTTCCCCEEEEECTTSCSEEEEEHHHHHHHHHHHH---------HHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHhccCcccCCCCceEEEeecCCccceEEcHHHHHHHHHHHH---------HHHHHHHHHHHHH
Confidence 0010 00000 0111222221 1 11111111 111112222 3566677777766
Q ss_pred CCh---HH-HHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeC----CCCCCCC-----CCCceeeeehhhhh
Q 020526 230 VSS---EN-HRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVK----PPEYMPE-----NLTLYSAWIGGAIL 296 (325)
Q Consensus 230 ~~~---d~-r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~----~~~~~~~-----~~~~~~~W~G~si~ 296 (325)
... +. ...+...|+||||+|++||+.+.+++.+ ..++++.. .|..+.. ..|.|++-+|-.++
T Consensus 316 ~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~-----g~~vri~~~~~~~p~~~~~~~~~~~~P~~~t~~Gl~~~ 390 (419)
T 4a2a_A 316 VEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVF-----KSPVRTGCYANSDRPSIINADEVANDPSFAAAFGNVFA 390 (419)
T ss_dssp HTTCC--------TTCEEEESGGGGSTTHHHHHHHHH-----TSCEEECCGGGSSSCCCBTCHHHHTCGGGHHHHHTTCC
T ss_pred cCCCcccccccccCCEEEEECchhchhhHHHHHHHHH-----CCCeEEEecCCCCchhccCcccccCCchHHHHHHHHHH
Confidence 532 22 3456778999999999999999999999 33555544 1221211 23677777777777
Q ss_pred hcc
Q 020526 297 AKV 299 (325)
Q Consensus 297 a~l 299 (325)
+..
T Consensus 391 ~~~ 393 (419)
T 4a2a_A 391 VSE 393 (419)
T ss_dssp ---
T ss_pred Hhh
Confidence 654
No 22
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=98.76 E-value=2.1e-08 Score=92.22 Aligned_cols=82 Identities=16% Similarity=0.101 Sum_probs=62.8
Q ss_pred CceEEEEcCCCCCHHHH-HHHHHHhhhh-----------cCCCeEEEechhhhhhhhcC-----------CceEEEEEcC
Q 020526 87 EGQILFTDPLCSPKAVR-EQLVQLMFET-----------FNISGFYSSEQAVLSLYAVG-----------RISGCTVDIG 143 (325)
Q Consensus 87 ~~~vll~~~~~~~~~~r-~~l~~~lfe~-----------~~~~~v~~~~~~~~a~~~~g-----------~~tglVVdiG 143 (325)
+..+++..|.-.....| +++.+.+... +.+..|.+++++++|+++.+ ..+-+|||+|
T Consensus 113 ~~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~~~~~~~~~~~vvDiG 192 (355)
T 3js6_A 113 NVVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKVFKAFTEGKYSVLDFG 192 (355)
T ss_dssp EEEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEECHHHHTCEEEEEEEC
T ss_pred eEEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCccccccccCcEEEEEeC
Confidence 34577777766555555 4677766532 23478999999999999874 3466899999
Q ss_pred CCceEEEEeecCeeccccceeecCc
Q 020526 144 HGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 144 ~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
+++|.++.+.+|.++......++.|
T Consensus 193 ggTtd~~v~~~~~~~~~~s~s~~~G 217 (355)
T 3js6_A 193 SGTTIIDTYQNMKRVEEESFVINKG 217 (355)
T ss_dssp SSCEEEEEEETTEECGGGCEEESCC
T ss_pred CCcEEEEEEcCCEEccccccCcchH
Confidence 9999999998899988777788888
No 23
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=98.65 E-value=3.1e-07 Score=83.48 Aligned_cols=157 Identities=12% Similarity=0.067 Sum_probs=95.4
Q ss_pred eEEEEcCCCcEEEeee-CC---CCCCcEecccceeecCC-----------------CcccccCccccccCceeccccCCe
Q 020526 3 AAVVDAGSKLLKAGPA-IP---DQAPSMVIPSQMKRVLE-----------------DGSSSVDNSTLVEDVTVDPVVRGF 61 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a-~g---d~~P~~~~ps~~~~~~~-----------------~~~~g~~~~~~~~~~~~~p~~~g~ 61 (325)
.|-||+|-+++|+-.. .+ +..-+..|||.++...+ .+++| +.+.. +......
T Consensus 9 iigiD~G~~~~K~~~~~~~g~~~~~~~~~FpS~v~~~~~~~~~~~~~~~~v~~~G~~Y~vG-~~a~~------~~~~~~k 81 (329)
T 4apw_A 9 VMTLDAGKYETKLIGKNKKGTTEDIKRVIFKTKIYNLEDGYIDIEGNSHKIELDGKEYLIG-EQGVE------DSSETSK 81 (329)
T ss_dssp EEEEEECSSEEEEEEHHHHHHCCSSTTEEEESCCEECCEESCCCCCSCEEEECSSSEEEES-CCSSS------CSGGGCC
T ss_pred EEEEecCCceEEEEeccCCCcccceeEEeecccccccccccccCCCCceEEEECCEEEEeC-ccccc------ccccCCc
Confidence 3689999999998643 02 12245778998754211 12334 32210 1111112
Q ss_pred ecCHHHHHHHHHHHHHhccCCCCCCCceEEEEcCCCCC--HHHHHHHHHHhhhh-------------cCCCeEEEechhh
Q 020526 62 IRDWDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSP--KAVREQLVQLMFET-------------FNISGFYSSEQAV 126 (325)
Q Consensus 62 i~d~~~~~~il~~~~~~~l~~~~~~~~~vll~~~~~~~--~~~r~~l~~~lfe~-------------~~~~~v~~~~~~~ 126 (325)
+-+....++..++.+.+......+..+++..|.-.- .+.|+++.+.+-.. +.+..+.+.|+++
T Consensus 82 --~~~~~~~L~l~Aia~~~~~~~~~~v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ 159 (329)
T 4apw_A 82 --TNLIHKLAAYTAITQVLDSNKNNKVQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGS 159 (329)
T ss_dssp --CTTHHHHHHHHHHHTTCCSSSEEEEEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHH
T ss_pred --CchhHHHHHHHHHHHHhccccCceEEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccH
Confidence 223455566666644443321123455666664432 22455666655521 2356799999999
Q ss_pred hhhhhcC----CceEEEEEcCCCceEEEEeecCeeccccceeecCc
Q 020526 127 LSLYAVG----RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 127 ~a~~~~g----~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
.|++... ..+-+|||+|+++|.++.+.+|.++......+++|
T Consensus 160 ga~~~~~~~~~~~~v~vvDiGggTtd~~v~~~g~~~~~~~~~~~~G 205 (329)
T 4apw_A 160 GVLFLEQENFKNKNVAVIDFGGLNMGFSLYRNCVVNPSERFIEEHG 205 (329)
T ss_dssp HHHHHSCCCCTTCEEEEEEECSSCEEEEEEETTEECGGGCEEESCC
T ss_pred HHHhhcchhhccCCEEEEEeCCCcEEEEEEECCEEeeccccchhhH
Confidence 9998762 35679999999999999999999987766777888
No 24
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=98.58 E-value=2.5e-08 Score=90.37 Aligned_cols=57 Identities=21% Similarity=0.209 Sum_probs=44.9
Q ss_pred hhcCCCeEEEechhhhhhhhcC-----CceEEEEEcCCCceEEEEeecCee-ccccceeecCc
Q 020526 112 ETFNISGFYSSEQAVLSLYAVG-----RISGCTVDIGHGKIDIAPVIEGAV-QHIASRRFEVG 168 (325)
Q Consensus 112 e~~~~~~v~~~~~~~~a~~~~g-----~~tglVVdiG~~~t~v~pv~~G~~-i~~~~~~~~~g 168 (325)
+.+++..+.++++|++|+++.+ ..+.+|||+|+++|.++.+.+|.+ +.......++|
T Consensus 136 ~~~~i~~v~~~~e~~aa~~~~~~~~~~~~~~~vvDiGggttd~~v~~~g~~~v~~~~~~~~lG 198 (320)
T 2zgy_A 136 DTFTIKDVKVMPESIPAGYEVLQELDELDSLLIIDLGGTTLDISQVMGKLSGISKIYGDSSLG 198 (320)
T ss_dssp CCCEEEEEEEEESSHHHHHHHHHHSCTTCEEEEEEECSSCEEEEEEEGGGCCEEEEEEECSCC
T ss_pred cEEEEEEEEEecCcHHHHHhhhccccCCCCEEEEEcCCCeEEEEEEeCCeeEEeeecCCcccc
Confidence 3455678999999999998763 357799999999999999998876 44344566777
No 25
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=97.44 E-value=0.0039 Score=54.58 Aligned_cols=66 Identities=20% Similarity=0.358 Sum_probs=46.0
Q ss_pred cHHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhh
Q 020526 218 GIVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 297 (325)
Q Consensus 218 ~i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a 297 (325)
++.+.|.+.+... -.+....++|+++||.+.+|++.++|++.+ ..+++.+++ |.+..=+||+++|
T Consensus 188 ~~~~~v~~~l~~~--~~~~~~~~~vvl~GGva~n~~lr~~l~~~~-------g~~~~~p~~------p~~~~A~GAAl~A 252 (276)
T 4ehu_A 188 GIHTSVAKRVSSL--VKRIGVQRNVVMVGGVARNSGIVRAMAREI-------NTEIIVPDI------PQLTGALGAALYA 252 (276)
T ss_dssp HHHHHHHHHHHHH--HHHHCCCSSEEEESGGGGCHHHHHHHHHHH-------TSCEECCSS------GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH--HHhcccCCeEEEecCccchHHHHHHHHHHH-------CCCeeeCCC------cchHHHHHHHHHH
Confidence 3444444444331 234455678999999999999999999888 334555555 6677668999998
Q ss_pred c
Q 020526 298 K 298 (325)
Q Consensus 298 ~ 298 (325)
.
T Consensus 253 ~ 253 (276)
T 4ehu_A 253 F 253 (276)
T ss_dssp H
T ss_pred H
Confidence 4
No 26
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=95.69 E-value=0.017 Score=50.43 Aligned_cols=48 Identities=19% Similarity=0.363 Sum_probs=36.9
Q ss_pred cccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
-+.|+++||.++.+++.+.+.+.| ...|..++. +.+..=+|++++|..
T Consensus 209 ~~~i~~~GG~a~n~~~~~~~~~~l-------g~~v~~p~~------~~~~~AlGAAl~A~~ 256 (270)
T 1hux_A 209 VKDVVMTGGVAQNYGVRGALEEGL-------GVEIKTSPL------AQYNGALGAALYAYK 256 (270)
T ss_dssp CSSEEEESGGGGCHHHHHHHHHHH-------CSCEECCGG------GGGHHHHHHHHHHHH
T ss_pred CCeEEEeCccccCHHHHHHHHHHH-------CCCeEeCCC------cchHhHHHHHHHHHH
Confidence 467999999999999999999998 123444443 566677899999864
No 27
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.56 E-value=0.034 Score=49.70 Aligned_cols=77 Identities=14% Similarity=0.130 Sum_probs=48.4
Q ss_pred ceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhh-------cC-CceEEEEEcCCCceEEEEeecCeecc
Q 020526 88 GQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYA-------VG-RISGCTVDIGHGKIDIAPVIEGAVQH 159 (325)
Q Consensus 88 ~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~-------~g-~~tglVVdiG~~~t~v~pv~~G~~i~ 159 (325)
..++-|.-.. .-.+++..++.+-+..+++ +-+++..-=|.++ .+ ..+++|||+|+++|.++-.-+|.+..
T Consensus 85 i~~vATsA~R-~A~N~~~fl~~v~~~~G~~-i~vIsg~eEA~l~~~gv~~~l~~~~~~lvvDIGGGStEl~~~~~~~~~~ 162 (315)
T 1t6c_A 85 VKAVATEAIR-RAKNAEEFLERVKREVGLV-VEVITPEQEGRYAYLAVAYSLKPEGEVCVVDQGGGSTEYVFGKGYKVRE 162 (315)
T ss_dssp EEEEECHHHH-TSTTHHHHHHHHHHHTCCC-EEECCHHHHHHHHHHHHHHHTCCCSEEEEEEEETTEEEEEEEETTEEEE
T ss_pred EEEEEcHHHH-cCcCHHHHHHHHHHHHCCC-EEEcCHHHHHHHHHHHHHhhcccCCCEEEEEeCCCcEEEEEEeCCceee
Confidence 3444443322 2345667777777778875 5566554322222 24 66899999999999999988877643
Q ss_pred ccceeecCc
Q 020526 160 IASRRFEVG 168 (325)
Q Consensus 160 ~~~~~~~~g 168 (325)
...+++|
T Consensus 163 --~~Sl~~G 169 (315)
T 1t6c_A 163 --VISLPIG 169 (315)
T ss_dssp --EEEECCC
T ss_pred --EEEEecc
Confidence 3445555
No 28
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=94.67 E-value=0.23 Score=47.33 Aligned_cols=65 Identities=11% Similarity=0.179 Sum_probs=44.4
Q ss_pred HHHHHHHHHhhhhcCCCeEEEechhh---hhhh----hcCCceEEEEEcCCCceEEEEeecCeeccccceeecCc
Q 020526 101 AVREQLVQLMFETFNISGFYSSEQAV---LSLY----AVGRISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 101 ~~r~~l~~~lfe~~~~~~v~~~~~~~---~a~~----~~g~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
.++...++-+-+..|++ +-+++..- +... +....+++|||||+++|.++-+-+|.+.. ...+++|
T Consensus 100 ~N~~~fl~~i~~~tG~~-ievIsG~EEA~l~~~gv~~~~~~~~~lvvDIGGGStEl~~~~~~~~~~--~~Sl~lG 171 (508)
T 3hi0_A 100 ENGPDFIREAEAILGCE-IEVLSGEKEALYSAYGVISGFYQPDGIAGDLGGGSLELIDIKDKSCGE--GITLPLG 171 (508)
T ss_dssp TTHHHHHHHHHHHHTSC-EEECCHHHHHHHHHHHHHHHSSSCEEEEEEECSSCEEEEEEETTEECC--CEEESCC
T ss_pred cCHHHHHHHHHHHHCCC-eEEecHHHHHHHHHHHHHhcCCCCCeEEEEeCCCceEEEEeeCCeeee--EEEecce
Confidence 34556666677777865 55655432 2222 22345789999999999999999887754 4677777
No 29
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=94.54 E-value=0.31 Score=41.88 Aligned_cols=15 Identities=20% Similarity=0.153 Sum_probs=14.3
Q ss_pred EEEEcCCCcEEEeee
Q 020526 4 AVVDAGSKLLKAGPA 18 (325)
Q Consensus 4 vViD~Gs~~~k~G~a 18 (325)
++||+|..++|+|+-
T Consensus 6 L~IDIGNT~ik~gl~ 20 (249)
T 3bex_A 6 LLVDVGNTHSVFSIT 20 (249)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEEECCCeEEEEEE
Confidence 789999999999998
No 30
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=94.33 E-value=0.14 Score=48.74 Aligned_cols=44 Identities=14% Similarity=0.154 Sum_probs=33.4
Q ss_pred chhhhhhhhc----CC-ceEEEEEcCCCceEEEEeecCeeccccceeecCc
Q 020526 123 EQAVLSLYAV----GR-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 123 ~~~~~a~~~~----g~-~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
-++++|.++. ++ .-.++||+|+++|++.-+.+|..+.. ..+++|
T Consensus 390 ~ep~AAglaaLTeDE~eLGvaiIDmGGGTTd~sVf~~G~lv~a--~~ip~g 438 (610)
T 2d0o_A 390 AEAEAAILGALTTPGTTRPLAILDLGAGSTDASIINPKGDIIA--THLAGA 438 (610)
T ss_dssp EHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECTTCCEEE--EEEECS
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccc
Confidence 6677777766 33 35589999999999999999987765 445566
No 31
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=93.90 E-value=0.11 Score=46.35 Aligned_cols=65 Identities=20% Similarity=0.269 Sum_probs=41.4
Q ss_pred HHHHHHHHHhhhhcCCCeEEEechhhhh---hh----hcC--CceEEEEEcCCCceEEEEeecCeeccccceeecCc
Q 020526 101 AVREQLVQLMFETFNISGFYSSEQAVLS---LY----AVG--RISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 101 ~~r~~l~~~lfe~~~~~~v~~~~~~~~a---~~----~~g--~~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
.+++..++-+-+..+++ +-+++..-=| .+ +.. ..+++|+|+|+++|.++-+-+|.+... ..+++|
T Consensus 89 ~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~~lviDIGGGStEl~~~~~~~~~~~--~Sl~lG 162 (315)
T 3mdq_A 89 SNKQVLIDRIKKEVNID-VEVIDGAREAELIFRGVQQAVPMEDHISLAMDIGGGSVEFIIGNKNEILWK--QSFEIG 162 (315)
T ss_dssp TTHHHHHHHHHHHHCCC-EEECCHHHHHHHHHHHHHHHSCCTTCCEEEEEECSSCEEEEEECSSCEEEE--EEESCC
T ss_pred cCHHHHHHHHHHHHCCC-eEEeCHHHHHHHHHHHHHhcCCCCCCCEEEEEeCCCceEEEEEECCeEeee--EEEech
Confidence 34456666677777865 5555543222 22 122 367999999999999999988766542 344444
No 32
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=93.74 E-value=0.27 Score=47.00 Aligned_cols=147 Identities=14% Similarity=0.011 Sum_probs=76.3
Q ss_pred ceEEEEcCCCcEEEeeeCCCCCCcEecccceeecCCCcccccCccccccCceeccccCCeecCHHHHHHHHHHH--HHhc
Q 020526 2 EAAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHV--LYAG 79 (325)
Q Consensus 2 ~~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~d~~~~~~il~~~--~~~~ 79 (325)
..-+||+||.++|.-.+. -. +.. +. .+.+.+...-+| +. -...|.+ +.+.+++.++-+ |...
T Consensus 12 ~~AaIDiGSNSirL~I~~-~~-~~~-~~-~l~~~k~~vrLg-~g----------~~~~g~L-s~eai~r~~~~L~~f~~~ 75 (513)
T 1u6z_A 12 EFAAVDLGSNSFHMVIAR-VV-DGA-MQ-IIGRLKQRVHLA-DG----------LGPDNML-SEEAMTRGLNCLSLFAER 75 (513)
T ss_dssp CEEEEEECSSCEEEEEEE-EE-TTE-EE-EEEEEEECCCTG-GG----------BCTTCCB-CHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeccccEEEEEEE-Ec-CCe-eE-EEEeeEEEEecc-Cc----------ccccCCc-CHHHHHHHHHHHHHHHHH
Confidence 346999999999987772 21 211 11 111111112222 11 1123443 345666666532 1222
Q ss_pred cCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhh---h----cC-CceEEEEEcCCCceEEEE
Q 020526 80 LGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLY---A----VG-RISGCTVDIGHGKIDIAP 151 (325)
Q Consensus 80 l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~---~----~g-~~tglVVdiG~~~t~v~p 151 (325)
+....-.+..++-|.-.. .-.+++...+-+-+..|++ +-+++..-=|-+ + .. ...++|||||+++|.++-
T Consensus 76 ~~~~~v~~v~~vATsA~R-~A~N~~~fl~~i~~~tG~~-i~vIsG~eEA~l~~~gv~~~~~~~~~~lviDIGGGStEl~~ 153 (513)
T 1u6z_A 76 LQGFSPASVCIVGTHTLR-QALNATDFLKRAEKVIPYP-IEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVI 153 (513)
T ss_dssp TTTCCGGGEEEEECHHHH-HCTTHHHHHHHHTTTCSSC-EEECCHHHHHHHHHHHHHHHSCCCSCEEEEEECSSCEEEEE
T ss_pred HHhCCCCEEEEEecHHHH-cCcCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhccCCCCEEEEEECCCcEEEEE
Confidence 211110223333332211 1234556777777778865 556655422222 1 12 237999999999999998
Q ss_pred eecCeeccccceeecCc
Q 020526 152 VIEGAVQHIASRRFEVG 168 (325)
Q Consensus 152 v~~G~~i~~~~~~~~~g 168 (325)
.-+|.+.. ...+++|
T Consensus 154 ~~~~~~~~--~~Sl~lG 168 (513)
T 1u6z_A 154 GENFEPIL--VESRRMG 168 (513)
T ss_dssp EETTEEEE--EEEESCC
T ss_pred EeCCeeeE--EEEEecc
Confidence 87777653 4567777
No 33
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=93.15 E-value=0.15 Score=48.61 Aligned_cols=44 Identities=18% Similarity=0.177 Sum_probs=33.1
Q ss_pred chhhhhhhhc----CC-ceEEEEEcCCCceEEEEeecCeeccccceeecCc
Q 020526 123 EQAVLSLYAV----GR-ISGCTVDIGHGKIDIAPVIEGAVQHIASRRFEVG 168 (325)
Q Consensus 123 ~~~~~a~~~~----g~-~tglVVdiG~~~t~v~pv~~G~~i~~~~~~~~~g 168 (325)
-++++|.++. ++ .-.++||+|+++|++.-+.+|..+.. ..+++|
T Consensus 392 ~ep~AA~laaLTedE~elGvaiIDmGgGTTd~sVf~~g~lv~a--~~ip~g 440 (607)
T 1nbw_A 392 VEANMAIAGALTTPGCAAPLAILDLGAGSTDAAIVNAEGQITA--VHLAGA 440 (607)
T ss_dssp CHHHHHHHHHTTSTTCCSSEEEEEECSSEEEEEEECSSSCEEE--EEEECC
T ss_pred ccHHHhhhhhcCCCCCcCCeEEEEeCCCcceEEEEcCCcEEEE--EEeccc
Confidence 5677777765 33 35589999999999999999987765 445566
No 34
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=92.19 E-value=1.1 Score=40.55 Aligned_cols=99 Identities=11% Similarity=0.054 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHhccCCCCCCCceEEEEcCCC---CCHHHHHHHHHHhhhhc-------CCCeEEEechhhh-------
Q 020526 65 WDAMEDLLHHVLYAGLGWEEGNEGQILFTDPLC---SPKAVREQLVQLMFETF-------NISGFYSSEQAVL------- 127 (325)
Q Consensus 65 ~~~~~~il~~~~~~~l~~~~~~~~~vll~~~~~---~~~~~r~~l~~~lfe~~-------~~~~v~~~~~~~~------- 127 (325)
.+.+++.++ -|.. . ... ...++.+....- .+...++.+++.+-+.+ + -.+.+++..-=
T Consensus 52 ~~~~~~~l~-~f~~-~-~~~-~~~~v~~~ATaa~R~a~n~~~~~~l~~v~~~~~~~~~~~g-~~v~VIsG~eEa~~~~~g 126 (353)
T 3aap_A 52 SVTIDAYLT-MLLA-D-API-HNIPVYFYATAGMRLLPQSQQKKYYDELEYWFRQQSQWQL-VEAKTITGNDEALFDWLA 126 (353)
T ss_dssp HHHHHHHHH-HHHT-T-CSC-CSEEEEEEECHHHHTSCHHHHHHHHHHHHHHHHTCSSEEE-EEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHH-H-Hhc-CCCcEEEEecHHHhcCcHHHHHHHHHHHHHHHhhCCCCCC-CeEEECChHHHHHHHHHH
Confidence 566777776 3333 2 112 334555544322 23444667777666655 3 24556654322
Q ss_pred hhhhcC------CceEEEEEcCCCceEEEEeec--CeeccccceeecCc
Q 020526 128 SLYAVG------RISGCTVDIGHGKIDIAPVIE--GAVQHIASRRFEVG 168 (325)
Q Consensus 128 a~~~~g------~~tglVVdiG~~~t~v~pv~~--G~~i~~~~~~~~~g 168 (325)
+.+..+ ..+.+|+|+|+++|.++-..+ +.+.......+++|
T Consensus 127 v~~~l~~~~~~~~~t~~v~DiGGGStei~~~~~~~~~~~~~~~~sl~lG 175 (353)
T 3aap_A 127 VNYKLDTLKSVQNKSVGVMDMGGASVQIVFPMPKNAEISKHNQVELNIY 175 (353)
T ss_dssp HHHHTTCSSSCCSSCEEEEEECSSEEEEEEECCCCTTSCGGGEEEEEET
T ss_pred HHHHhhhccccccccEEEEEeCCCceEEEEecCCccccCCCceEEEEEC
Confidence 223333 246999999999999987644 33333334667777
No 35
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=91.57 E-value=0.35 Score=43.62 Aligned_cols=53 Identities=15% Similarity=0.122 Sum_probs=35.0
Q ss_pred HHHHHHHHHhhhhcCCCeEEEechh---hhhhhhc----C----CceEEEEEcCCCceEEEEeec
Q 020526 101 AVREQLVQLMFETFNISGFYSSEQA---VLSLYAV----G----RISGCTVDIGHGKIDIAPVIE 154 (325)
Q Consensus 101 ~~r~~l~~~lfe~~~~~~v~~~~~~---~~a~~~~----g----~~tglVVdiG~~~t~v~pv~~ 154 (325)
.+++..++-+-+.++++ +-+++.. .++..+. . ..+++|||+|+++|.++-+.+
T Consensus 102 ~N~~~fl~~v~~~tGi~-ieVIsG~eEA~l~~~gv~~~~~~~~~~~~~lviDIGGGStel~~~~~ 165 (343)
T 3cer_A 102 ENREEFEDEIERILGVR-PEVIPGTEEADLSFLGATSVVNRDDLPAPYLVVDLGGGSTELVIGGD 165 (343)
T ss_dssp TTHHHHHHHHHHHHSSC-CEECCHHHHHHHHHHHHHSSCCTTTCCSSEEEEEECSSCEEEEECCC
T ss_pred cCHHHHHHHHHHHHCCC-EEEeCHHHHHHHHHHHHHhhCccccccCCEEEEEeCCCceEEEEeec
Confidence 34556677777777765 5555543 3322221 2 256999999999999988766
No 36
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=90.85 E-value=0.17 Score=45.22 Aligned_cols=26 Identities=35% Similarity=0.502 Sum_probs=24.2
Q ss_pred ceEEEEEcCCCceEEEEeecCeeccc
Q 020526 135 ISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 135 ~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.++++||||..+|.|+||.+|.|+..
T Consensus 127 ~~~llvDIGsTTTDIipi~~G~pl~g 152 (334)
T 3cet_A 127 ENCILVDMGSTTTDIIPIVEGKVVAE 152 (334)
T ss_dssp SSEEEEEECSSCEEEEEEETTEECCC
T ss_pred CCEEEEEcCcchhhhhhhcCCeeccc
Confidence 68999999999999999999999773
No 37
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=89.25 E-value=4 Score=35.18 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=15.1
Q ss_pred eEEEEcCCCcEEEeee
Q 020526 3 AAVVDAGSKLLKAGPA 18 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a 18 (325)
-++||+|..++|+|+-
T Consensus 4 lL~IDIGNT~iK~gl~ 19 (266)
T 3djc_A 4 ILCIDVGNSHIYGGVF 19 (266)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCeEEEEEE
Confidence 6899999999999998
No 38
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=86.84 E-value=5.1 Score=34.58 Aligned_cols=15 Identities=27% Similarity=0.239 Sum_probs=14.2
Q ss_pred EEEEcCCCcEEEeee
Q 020526 4 AVVDAGSKLLKAGPA 18 (325)
Q Consensus 4 vViD~Gs~~~k~G~a 18 (325)
++||+|..++|+|+-
T Consensus 3 L~IDIGNT~ik~gl~ 17 (268)
T 2h3g_X 3 FVLDVGNTNAVLGVF 17 (268)
T ss_dssp EEEEECSSEEEEEEE
T ss_pred EEEEECcCcEEEEEE
Confidence 789999999999988
No 39
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=85.75 E-value=7.1 Score=33.67 Aligned_cols=53 Identities=17% Similarity=0.181 Sum_probs=42.2
Q ss_pred HHHHHhhhhcCCCeEEEechhhhhhhhc-----CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 105 QLVQLMFETFNISGFYSSEQAVLSLYAV-----GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 105 ~l~~~lfe~~~~~~v~~~~~~~~a~~~~-----g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+.+ +.+++| |++.+++-+++++- +..+.++|-+|.+ +-..-|.+|.++..
T Consensus 86 ~l~~~l-~~~~~p-v~v~NDa~aaa~~e~~~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 143 (292)
T 2gup_A 86 SWYEAL-SSYQLP-VHLENDANCVGLSELLAHPELENAACVVIGTG-IGGAMIINGRLHRG 143 (292)
T ss_dssp BHHHHT-GGGCCC-EEEEEHHHHHHHHHHHHCTTCSSEEEEEESSS-EEEEEEETTEEECC
T ss_pred CHHHHH-HHcCCC-EEEechHHHHHHHHHHhcCCCCeEEEEEECCc-eEEEEEECCEEEec
Confidence 456777 888988 88999999988873 5679999999986 55666789988764
No 40
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=84.20 E-value=15 Score=31.57 Aligned_cols=71 Identities=13% Similarity=0.065 Sum_probs=49.3
Q ss_pred ceEEEEcCCCCCHHHHHHHHHHhhhhcCC-CeEEEechhhhhhhh-cCCceEEEEEcCCCceEEEEeecCeecc
Q 020526 88 GQILFTDPLCSPKAVREQLVQLMFETFNI-SGFYSSEQAVLSLYA-VGRISGCTVDIGHGKIDIAPVIEGAVQH 159 (325)
Q Consensus 88 ~~vll~~~~~~~~~~r~~l~~~lfe~~~~-~~v~~~~~~~~a~~~-~g~~tglVVdiG~~~t~v~pv~~G~~i~ 159 (325)
..+-+..|-.. +.....+.+.+-+.+++ ..+.+.+++.+|+++ .+..++++|=+|.+.--..-+.||+...
T Consensus 61 ~~igig~pG~~-~~~~~~l~~~l~~~~~~~~pv~v~NDa~~aa~ge~g~~~~v~v~~GTGigg~~i~~~G~~~~ 133 (291)
T 1zbs_A 61 RAVYFYGAGCT-PAKAPMLNEALDSMLPHCDRIEVAGDMLGAARALCGDSEGIACILGTGSNSCLFDGREIKAN 133 (291)
T ss_dssp CEEEEEETTCC-TTTHHHHHHHHHHHSTTCSEEEEECHHHHHHHHHTTTSCEEEEEESSSEEEEEECSSSEEEE
T ss_pred cEEEEECCCCC-hHHHHHHHHHHHHhcCCCCcEEEeCcHHHHHHhhcCCCCcEEEEecCChheEEECCCCcEEE
Confidence 34666667654 22223455555566775 369999999999997 5788999999998875555556898753
No 41
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=83.85 E-value=0.66 Score=40.70 Aligned_cols=70 Identities=14% Similarity=0.080 Sum_probs=45.8
Q ss_pred cHHHHHHHHHHhCCh-HHHHhccccEEEecC-CCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhh
Q 020526 218 GIVEQLVHTISTVSS-ENHRQLLENTVLCGG-TTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAI 295 (325)
Q Consensus 218 ~i~~~I~~~i~~~~~-d~r~~l~~nIil~GG-~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si 295 (325)
+|.++|.+.|..+-. -.|+.=.++|+++|| .+..|++.++|.+.+.+. ..+++-+++ ++|..=+||++
T Consensus 215 sl~~sV~~~I~~la~~~a~~~~i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~----~~~~~~p~~------~~~~gAlGAaL 284 (287)
T 2ews_A 215 AVIGVVGEVVTTMAITVAREFKTENIVYIGSSFHNNALLRKVVEDYTVLR----GCKPYYVEN------GAFSGAIGALY 284 (287)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCEEEEESGGGTTCHHHHHHHHHHHHHT----TCEEEECTT------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCchhcCHHHHHHHHHHHhhC----CceEEECCC------ccHHHHHHHHH
Confidence 455555555543321 122333457999999 999999999999876332 335544555 67888888887
Q ss_pred hh
Q 020526 296 LA 297 (325)
Q Consensus 296 ~a 297 (325)
++
T Consensus 285 ~~ 286 (287)
T 2ews_A 285 LE 286 (287)
T ss_dssp TC
T ss_pred hC
Confidence 75
No 42
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=82.30 E-value=9.8 Score=33.41 Aligned_cols=52 Identities=10% Similarity=0.142 Sum_probs=39.6
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhh-------cCCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYA-------VGRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~-------~g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+-+.+++| |++.+++-+++++ .+..+.++|-+|.+ .-..-|.+|.++..
T Consensus 89 ~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 147 (321)
T 3vgl_A 89 KDKVEQRVGLP-VVVENDANAAAWGEYRFGAGQGHDDVICITLGTG-LGGGIIIGNKLRRG 147 (321)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHhhhhCCC-EEEEehhhhHHHHHHHhCCCCCCCCEEEEEeCcc-eEEEEEECCEEecC
Confidence 33444567888 8899999888876 24578999999987 66777789998764
No 43
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=81.79 E-value=1.7 Score=40.63 Aligned_cols=55 Identities=11% Similarity=0.111 Sum_probs=34.9
Q ss_pred HHHHHHHHhhhhcC---C--CeEEEechhhh-------hhhhcC---------------CceEEEEEcCCCceEEEEeec
Q 020526 102 VREQLVQLMFETFN---I--SGFYSSEQAVL-------SLYAVG---------------RISGCTVDIGHGKIDIAPVIE 154 (325)
Q Consensus 102 ~r~~l~~~lfe~~~---~--~~v~~~~~~~~-------a~~~~g---------------~~tglVVdiG~~~t~v~pv~~ 154 (325)
.++.+++.+-+.++ + ..+.+++..-= +.+..| ..+..|+|+|+++|.++-..+
T Consensus 130 n~~~~L~~v~~~l~~~~f~~~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~~ 209 (456)
T 3cj1_A 130 ATARVLEAVTQTLTQYPFDFRGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFETT 209 (456)
T ss_dssp HHHHHHHHHHHHHTTSSSEEEEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEECC
T ss_pred HHHHHHHHHHHHHhhCCCCcCceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEeccC
Confidence 45666666656553 2 35666665422 223334 346789999999999998766
Q ss_pred Ce
Q 020526 155 GA 156 (325)
Q Consensus 155 G~ 156 (325)
..
T Consensus 210 ~~ 211 (456)
T 3cj1_A 210 SP 211 (456)
T ss_dssp SC
T ss_pred Cc
Confidence 54
No 44
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=81.68 E-value=2.6 Score=39.35 Aligned_cols=90 Identities=10% Similarity=0.101 Sum_probs=49.6
Q ss_pred HHHHHHHHHHHHhccCCCCCCCceEEEEcCCCC---C---HHHHHHHHHHhhhhcC-----CCeEEEechh-------hh
Q 020526 66 DAMEDLLHHVLYAGLGWEEGNEGQILFTDPLCS---P---KAVREQLVQLMFETFN-----ISGFYSSEQA-------VL 127 (325)
Q Consensus 66 ~~~~~il~~~~~~~l~~~~~~~~~vll~~~~~~---~---~~~r~~l~~~lfe~~~-----~~~v~~~~~~-------~~ 127 (325)
+.+..+++.+....-.... +..|+.+....-+ + ...++.+.+.+-+.++ +..+.+++.. ++
T Consensus 89 ~~l~~Ll~~a~~~vp~~~~-~~tpi~~~ATAgmR~l~~~~~~~~~~il~~v~~~l~~~~f~~~~v~iisG~eEg~y~wi~ 167 (452)
T 3zx3_A 89 AYLAECMKMSTERIPASKQ-HQTPVYLGATAGMRLLRMESKQSADEVLAAVSRSLKSYPFDFQGAKIITGQEEGAYGWIT 167 (452)
T ss_dssp HHHHHHHHHHHHHSCHHHH-TTCEEEEEECHHHHHHHHHCHHHHHHHHHHHHHHHHTSSSEEEEEEECCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHc-CCccEEEEeeHHHhhccccCHHHHHHHHHHHHHHHhhCCCCCCceEECCchhhhhhhHHH
Confidence 3566677665432111112 4567766655322 1 1234555555544442 2467777654 22
Q ss_pred hhhhcCC------ceEEEEEcCCCceEEEEeecCe
Q 020526 128 SLYAVGR------ISGCTVDIGHGKIDIAPVIEGA 156 (325)
Q Consensus 128 a~~~~g~------~tglVVdiG~~~t~v~pv~~G~ 156 (325)
+.|..|. .+..++|+|+++|+|+=..++.
T Consensus 168 vnyllg~l~~~~~~t~g~lDlGGgStQi~f~~~~~ 202 (452)
T 3zx3_A 168 INYLLGRFKTPGGSTFGALDLGGASTQITFVPLNS 202 (452)
T ss_dssp HHHHTTTTC---CCCCEEEEECSSEEEEEECCSSC
T ss_pred HHhhhccccCCCCCceEEEecCCCceEEEeccCCC
Confidence 3334452 5677899999999998776654
No 45
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=81.39 E-value=1.5 Score=39.58 Aligned_cols=72 Identities=7% Similarity=0.083 Sum_probs=47.8
Q ss_pred cHHHHHHHHHHhCCh-HHHHhccccEEEecC-CCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhh
Q 020526 218 GIVEQLVHTISTVSS-ENHRQLLENTVLCGG-TTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGA 294 (325)
Q Consensus 218 ~i~~~I~~~i~~~~~-d~r~~l~~nIil~GG-~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~s 294 (325)
+|..+|.+.|.+... .-++.=.++|+++|| .+..|++.+.|++.| -.-....++.+..+ +++..=+||.
T Consensus 284 gll~sVa~~I~~lA~l~A~~~~i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~--------~~y~GAlGAa 355 (360)
T 2i7n_A 284 ATLVTITNNIGSIARMCALNENIDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEH--------EGYFGAVGAL 355 (360)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETT--------TTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCC--------ccHHHHHHHH
Confidence 555566555554421 124444568999999 999999999999998 33333445555444 4577778887
Q ss_pred hhh
Q 020526 295 ILA 297 (325)
Q Consensus 295 i~a 297 (325)
+++
T Consensus 356 L~~ 358 (360)
T 2i7n_A 356 LEL 358 (360)
T ss_dssp HHH
T ss_pred HHh
Confidence 764
No 46
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=71.58 E-value=45 Score=28.68 Aligned_cols=128 Identities=14% Similarity=0.151 Sum_probs=69.4
Q ss_pred eEEEEcCCCcEEEeeeCCCCCCcEecccceeecCCCcccccCccccccCceeccccCCeecCHHHHHHHHHHHHHhccCC
Q 020526 3 AAVVDAGSKLLKAGPAIPDQAPSMVIPSQMKRVLEDGSSSVDNSTLVEDVTVDPVVRGFIRDWDAMEDLLHHVLYAGLGW 82 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a~gd~~P~~~~ps~~~~~~~~~~~g~~~~~~~~~~~~~p~~~g~i~d~~~~~~il~~~~~~~l~~ 82 (325)
.|.||+|+.++|++.. ..+.- ..-.... . ..+...+.-.-++.+.++++.++.+ .+.
T Consensus 13 ~lGiDiGgT~i~~~l~-d~~G~-il~~~~~---------~-----------~~~~~~~~~~~~~~l~~~i~~~l~~-~~~ 69 (305)
T 1zc6_A 13 LIGVDGGGTGTRIRLH-ASDGT-PLAMAEG---------G-----------ASALSQGIAKSWQAVLSTLEAAFQQ-AGL 69 (305)
T ss_dssp EEEEEECSSCEEEEEE-ETTCC-EEEEEEE---------S-----------CCCGGGCHHHHHHHHHHHHHHHHHH-TTC
T ss_pred EEEEEcCccceEEEEE-cCCCC-EEEEEeC---------C-----------CCCcccCHHHHHHHHHHHHHHHHHh-cCC
Confidence 5789999999999998 33221 1100000 0 0000011001234555666665543 333
Q ss_pred CCCCC---ceEEEEcCCCCCHHHHHHHHHHhhhhc--CCCeEEEechhhhhhhhc-CCceEEEEEcCCCceEEEEeecCe
Q 020526 83 EEGNE---GQILFTDPLCSPKAVREQLVQLMFETF--NISGFYSSEQAVLSLYAV-GRISGCTVDIGHGKIDIAPVIEGA 156 (325)
Q Consensus 83 ~~~~~---~~vll~~~~~~~~~~r~~l~~~lfe~~--~~~~v~~~~~~~~a~~~~-g~~tglVVdiG~~~t~v~pv~~G~ 156 (325)
++ .+ ..+-+..|-.........+ -+.+ ++ .|.+.+++-+++++. +..++++|-+|.+..-..-+.+|.
T Consensus 70 ~~-~~i~~~~igig~pG~v~~~~~~~l----~~~~~~~~-pv~v~NDa~aaa~ge~~~~~~v~v~~GTGigg~~i~~~G~ 143 (305)
T 1zc6_A 70 PA-APASACAIGLGLSGVHNRQWAGEF----ESQAPGFA-RLSLATDGYTTLLGAHGGQPGIIVALGTGSIGEALYPDGS 143 (305)
T ss_dssp CC-CCGGGEEEEEEESCCCTTSHHHHH----HHTCCCCS-EEEEECHHHHHHHHHTTTSSEEEEEESSSEEEEEECTTSC
T ss_pred Ch-hhhccceEEEEecCCCchHHHHHH----HHhCCCCc-eEEEECCHHHHHHhhcCCCCeEEEEecCCeEEEEEeCCCc
Confidence 33 33 2466677765443222222 2233 33 489999999988874 568899999998874333334887
Q ss_pred ecc
Q 020526 157 VQH 159 (325)
Q Consensus 157 ~i~ 159 (325)
...
T Consensus 144 ~~~ 146 (305)
T 1zc6_A 144 HRE 146 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 47
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=71.11 E-value=23 Score=30.28 Aligned_cols=52 Identities=13% Similarity=0.056 Sum_probs=38.7
Q ss_pred HHHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 106 LVQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 106 l~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+.+=+.+++| +.+.+++-+++++- +. +.++|.+|.+ +-..-|.+|.++..
T Consensus 88 l~~~l~~~~~~p-v~v~NDa~aaa~~e~~~g~~~~~-~~v~l~~GtG-iG~gii~~G~l~~G 146 (289)
T 2aa4_A 88 LVKTLEQLTNLP-TIAINDAQAAAWAEFQALDGDIT-DMVFITVSTG-VGGGVVSGCKLLTG 146 (289)
T ss_dssp HHHHHHHHHCSC-EEEEEHHHHHHHHHHHTSCTTCC-CEEEEEESSS-EEEEEEETTEEECC
T ss_pred hHHHHHHHHCCC-EEEechHHHHHHHHHHhCCCCCc-eEEEEEeCcc-EEEEEEECCEEeeC
Confidence 344444567887 88999998888753 34 9999999987 56677789988754
No 48
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=68.79 E-value=3.6 Score=35.83 Aligned_cols=52 Identities=15% Similarity=0.052 Sum_probs=38.4
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 90 ~~~l~~~~~~p-V~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 148 (297)
T 4htl_A 90 KEWLEAETGLP-VAIENDANCALLAEKWLGKGQDLDDFLCLTIGTG-IGGGIFSNGELVRG 148 (297)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHCcC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECcc-eEEEEEECCEEEec
Confidence 33444567888 89999988887752 4678999999985 55566779988764
No 49
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=67.36 E-value=26 Score=30.76 Aligned_cols=52 Identities=15% Similarity=-0.019 Sum_probs=39.0
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 113 ~~~l~~~~~~p-V~v~NDa~aaalgE~~~g~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G 171 (327)
T 4db3_A 113 RADLEAKIGRS-VKIENDANCFALSEAWDEELQDAPSVMGLILGTG-FGGGLIYEGKVFSG 171 (327)
T ss_dssp HHHHHHHHSSC-CEEEEHHHHHHHHHHTSTTTTTCSEEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHHCCC-EEEecchhHHHHHHHHhCCCCCCCcEEEEEeCcc-ceEEEEECCEEeec
Confidence 34444667888 89999998888753 4578899999986 66666779987754
No 50
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=62.88 E-value=4.5 Score=35.79 Aligned_cols=66 Identities=15% Similarity=0.151 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCC-CCcceEEeCCCCCCCCCCCceeeeehhhhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCS-SAIRPTLVKPPEYMPENLTLYSAWIGGAIL 296 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~-~~~~v~v~~~~~~~~~~~~~~~~W~G~si~ 296 (325)
|...|.+.+..++++ .|+|.||.+..+-|.+++++.+ +... ...++++....- ...++-+||+.+
T Consensus 257 La~~i~~l~~~l~p~-------~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~l------g~~a~~~GAa~l 323 (327)
T 4db3_A 257 LAICFGNIFTANDPH-------VVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKH------GDSGGVRGAAFL 323 (327)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSC------GGGHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCC------CCcHHHHHHHHH
Confidence 444444444444544 3889999888888889999888 5442 222344443322 344555777765
Q ss_pred h
Q 020526 297 A 297 (325)
Q Consensus 297 a 297 (325)
+
T Consensus 324 ~ 324 (327)
T 4db3_A 324 N 324 (327)
T ss_dssp T
T ss_pred H
Confidence 4
No 51
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=62.18 E-value=80 Score=27.50 Aligned_cols=82 Identities=11% Similarity=0.083 Sum_probs=51.9
Q ss_pred HHHHHHHHHHHHHhccCCCCC-CCceEEEEcCCCCCHHHHHHHHHHhhhhcC---CCeEEEechhhhhhhhcCCceEEEE
Q 020526 65 WDAMEDLLHHVLYAGLGWEEG-NEGQILFTDPLCSPKAVREQLVQLMFETFN---ISGFYSSEQAVLSLYAVGRISGCTV 140 (325)
Q Consensus 65 ~~~~~~il~~~~~~~l~~~~~-~~~~vll~~~~~~~~~~r~~l~~~lfe~~~---~~~v~~~~~~~~a~~~~g~~tglVV 140 (325)
|+.+.++++.++.+ .+..+. .-.-+-+..|-.........+.+.+=+.++ +| |.+.+++-+++++....++++|
T Consensus 49 ~~~i~~~i~~~~~~-~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~p-v~v~NDa~aaa~a~~~~~~v~v 126 (347)
T 2ch5_A 49 VERINEMVNRAKRK-AGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSES-YLITTDAAGSIATATPDGGVVL 126 (347)
T ss_dssp HHHHHHHHHHHHHH-HTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSC-EEEEEHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHHHHHh-cCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCce-EEEECcHHHHHHhhCCCCcEEE
Confidence 44555666665543 233331 124567777777665555566666656665 44 8899999888887544678889
Q ss_pred EcCCCceE
Q 020526 141 DIGHGKID 148 (325)
Q Consensus 141 diG~~~t~ 148 (325)
-+|.+.-.
T Consensus 127 ~~GTGig~ 134 (347)
T 2ch5_A 127 ISGTGSNC 134 (347)
T ss_dssp EESSSEEE
T ss_pred EEcCCcee
Confidence 88886544
No 52
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=59.90 E-value=40 Score=28.90 Aligned_cols=15 Identities=27% Similarity=0.319 Sum_probs=14.3
Q ss_pred EEEEcCCCcEEEeee
Q 020526 4 AVVDAGSKLLKAGPA 18 (325)
Q Consensus 4 vViD~Gs~~~k~G~a 18 (325)
++||+|-.++|+|.-
T Consensus 26 L~IDiGNT~ik~g~~ 40 (271)
T 2f9w_A 26 LELDCGNSLIKWRVI 40 (271)
T ss_dssp EEEEECSSCEEEEEE
T ss_pred EEEEeCCCeeEEEEE
Confidence 899999999999998
No 53
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=57.13 E-value=92 Score=26.61 Aligned_cols=65 Identities=14% Similarity=0.109 Sum_probs=41.2
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 297 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a 297 (325)
|...|.+.+..++++. |+|.||.+..+.|.+++++.+ ........+..... ...+.-+||+.++
T Consensus 225 La~~i~~l~~~~~p~~-------IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~l--------g~~a~~~GAa~l~ 289 (297)
T 4htl_A 225 ICTGLYNLIYLFDPTH-------IFIGGGITSRPTFIAELKHHMESFGLRDTIIETATH--------KNQAGLLGAVYHF 289 (297)
T ss_dssp HHHHHHHHHHHHCCSE-------EEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSC--------TTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCE-------EEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCc--------CChHHHHhHHHHH
Confidence 4444455545455543 999999998899999999999 54433333333222 3456778887765
Q ss_pred c
Q 020526 298 K 298 (325)
Q Consensus 298 ~ 298 (325)
-
T Consensus 290 ~ 290 (297)
T 4htl_A 290 L 290 (297)
T ss_dssp H
T ss_pred H
Confidence 4
No 54
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=57.00 E-value=4.2 Score=35.05 Aligned_cols=65 Identities=14% Similarity=0.164 Sum_probs=38.9
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILA 297 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a 297 (325)
|..++...+..++++ .|+|.||.+..+-|.+++++.+ +.... ..+.+..... ...++-+||+.++
T Consensus 221 L~~~i~~l~~~l~p~-------~ivlgG~~~~~~~~~~~l~~~l~~~~~~-~~~~i~~~~~------~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 221 LARLIADIKATTDCQ-------CVVVGGSVGLAEGYLALVETYLAQEPAA-FHVDLLAAHY------RHDAGLLGAALLA 286 (289)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEEHHHHTSTTHHHHHHHHHTTSCGG-GCCEEEECSC------SSCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-------EEEEeCcccccHHHHHHHHHHHHHhcCc-cCCEEEECCC------CCchHHHHHHHHH
Confidence 344444444444443 3889999887788999999998 54211 2334433222 3355667887765
No 55
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=56.20 E-value=94 Score=26.42 Aligned_cols=61 Identities=21% Similarity=0.161 Sum_probs=40.5
Q ss_pred eEEEEcCCCCCHHHHHHHHHHhhhhcCCCeEEEechhhhhhhhc-CCceEEEEEcCCCceEEEEeecCe
Q 020526 89 QILFTDPLCSPKAVREQLVQLMFETFNISGFYSSEQAVLSLYAV-GRISGCTVDIGHGKIDIAPVIEGA 156 (325)
Q Consensus 89 ~vll~~~~~~~~~~r~~l~~~lfe~~~~~~v~~~~~~~~a~~~~-g~~tglVVdiG~~~t~v~pv~~G~ 156 (325)
.+-+..|-.........+.+.+=+ +++ .+.+.++.-+++++. ...++++|-+|.+. |.+|+
T Consensus 62 ~igi~~~G~~~~~~~~~l~~~l~~-~~~-pv~v~ND~~aaa~~e~~~~~~v~l~~GTG~-----i~~g~ 123 (299)
T 2e2o_A 62 VVGMGVAGLDSKFDWENFTPLASL-IAP-KVIIQHDGVIALFAETLGEPGVVVIAGTGS-----VVEGY 123 (299)
T ss_dssp EEEEEETTCCSHHHHHHHHHHHTT-SSS-EEEEEEHHHHHHHHHHTTSCEEEEEESSSE-----EEEEE
T ss_pred EEEEEcCCCCchhHHHHHHHHHHh-CCC-CEEEeCcHHHHHhhccCCCCeEEEEecCCE-----EEEEE
Confidence 566666766443333445555544 675 478888888888764 36789999999983 55665
No 56
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=52.03 E-value=7.6 Score=35.10 Aligned_cols=23 Identities=26% Similarity=0.471 Sum_probs=21.3
Q ss_pred ccEEEecCCCCccchHHHHHHhh
Q 020526 240 ENTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 240 ~nIil~GG~s~~~G~~~rl~~eL 262 (325)
..|++|||++.-|-+.+||++.|
T Consensus 285 ~~v~vcGGGa~N~~Lm~~L~~~l 307 (371)
T 3qbx_A 285 EEVLVCGGGAFNTALMKRLAMLM 307 (371)
T ss_dssp CEEEEESGGGGCHHHHHHHHHHC
T ss_pred ceEEEECCccCcHHHHHHHHHhC
Confidence 46999999999999999999887
No 57
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=50.44 E-value=87 Score=26.89 Aligned_cols=53 Identities=19% Similarity=0.183 Sum_probs=38.3
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeecccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHIA 161 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~~ 161 (325)
.+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|+++...
T Consensus 91 ~~~l~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~~~l~~GtG-iG~gii~~g~l~~G~ 150 (302)
T 3vov_A 91 RRILEEATGRP-VFLENDANAAALAEHHLGAAQGEESSLYLTVSTG-IGGGVVLGGRVLRGE 150 (302)
T ss_dssp HHHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCCT
T ss_pred HHHHHHhhCCC-EEEEechHHHHHHHHHhCCCCCCCCEEEEEECCc-eeEEEEECCEEeeCC
Confidence 34444667887 88899988887743 4678999999986 555566799887543
No 58
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=49.47 E-value=3.8 Score=35.46 Aligned_cols=65 Identities=11% Similarity=0.051 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCccchHHHHHHhh-ccCC------CCcceEEeCCCCCCCCCCCceeeee
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSMTGFEDRFQKEA-GLCS------SAIRPTLVKPPEYMPENLTLYSAWI 291 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~~G~~~rl~~eL-~~~~------~~~~v~v~~~~~~~~~~~~~~~~W~ 291 (325)
|...|.+.+..++++ .|+|.||.+..+-|.+++++.+ +..+ ...++..... ...+.-+
T Consensus 215 L~~~i~~l~~~l~p~-------~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~--------~~~a~~~ 279 (292)
T 2gup_A 215 LAQGLLNIQYLIDPG-------VISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTY--------HADANLY 279 (292)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSC--------STTHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEccc--------CChhhHH
Confidence 444444444444443 4889999877777888888877 4321 1123333222 2345667
Q ss_pred hhhhhhc
Q 020526 292 GGAILAK 298 (325)
Q Consensus 292 G~si~a~ 298 (325)
||+.++-
T Consensus 280 GAa~~~~ 286 (292)
T 2gup_A 280 GALVNWL 286 (292)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 8877763
No 59
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=48.68 E-value=1.5e+02 Score=26.48 Aligned_cols=49 Identities=10% Similarity=0.015 Sum_probs=32.2
Q ss_pred cEEEecCCCCccc-hHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 241 NTVLCGGTTSMTG-FEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 241 nIil~GG~s~~~G-~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
.|||+||.+...- |.+++.+.+ ... ++.+..... ...+.-.||..++..
T Consensus 298 ~IvlgGgi~~~~~~l~~~i~~~l~~~~----~~~i~~~~~------~~~a~~~GAa~l~~~ 348 (381)
T 1saz_A 298 FIVLTGGLAHEKEFLVPWITKRVSFIA----PVLVFPGSN------EEKALALSALRVLRG 348 (381)
T ss_dssp EEEEEEGGGGCTTTHHHHHHHHHTTTS----CEEEEEBCC------HHHHHHHHHHHHHTT
T ss_pred EEEEeCcCccChHHHHHHHHHHHHhhc----CeEEEecCc------chhHHHHHHHHHHcC
Confidence 4999999887655 889999888 543 345543322 223566788777653
No 60
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=48.43 E-value=6.2 Score=35.83 Aligned_cols=56 Identities=18% Similarity=0.249 Sum_probs=38.8
Q ss_pred HHHHHHhhhhcCCCeEEEechhh---------hhhh-----------------------hcCC--c--eEEEEEcCCCce
Q 020526 104 EQLVQLMFETFNISGFYSSEQAV---------LSLY-----------------------AVGR--I--SGCTVDIGHGKI 147 (325)
Q Consensus 104 ~~l~~~lfe~~~~~~v~~~~~~~---------~a~~-----------------------~~g~--~--tglVVdiG~~~t 147 (325)
-.+.+.+-+.+++|. ++.+++- ++++ ..++ . +.+++.+|.+ +
T Consensus 110 ~~l~~~l~~~~~~Pv-~v~NDan~~~~~~~a~aaalp~~~r~~gfhgls~~~~aE~~~~g~~~~~~~~~~v~~~lGtG-i 187 (381)
T 1saz_A 110 AIIAHRFSSETGVPA-YVVDPVVVDEMEDVARVSGHPNYQRKSIFHALNQKTVAKEVARMMNKRYEEMNLVVAHMGGG-I 187 (381)
T ss_dssp HHHHHHHHHHHCCCE-EEESCTTBCCCCGGGTBCSSTTCBCCCCSCHHHHHHHHHHHHHHTTCCGGGCEEEEEEESSS-E
T ss_pred HHHHHHHHHhcCCCE-EEeCCCccccCcHHHHHcCCcchhhhcccccccHHHHHHHHHHhcCCCCccCCEEEEEeCCC-c
Confidence 355566667889996 4777775 5444 2233 4 8999999985 5
Q ss_pred EEEEeecCeecccc
Q 020526 148 DIAPVIEGAVQHIA 161 (325)
Q Consensus 148 ~v~pv~~G~~i~~~ 161 (325)
....|.+|+.+...
T Consensus 188 G~g~i~~G~~~~G~ 201 (381)
T 1saz_A 188 SIAAHRKGRVIDVN 201 (381)
T ss_dssp EEEEEETTEEEEEC
T ss_pred EEEEEECCEEEEec
Confidence 77778899987653
No 61
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=48.13 E-value=9.6 Score=33.27 Aligned_cols=53 Identities=21% Similarity=0.229 Sum_probs=39.4
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeecccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHIA 161 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~~ 161 (325)
.+.+-+.+++| |.+.+++-+++++- +..+.++|-+|.+ .-..-|.||.++...
T Consensus 90 ~~~l~~~~~~p-V~v~NDanaaalaE~~~G~~~~~~~~~~l~~GtG-iG~gii~~G~l~~G~ 149 (302)
T 3epq_A 90 LQTVXNEMXIP-VGFSTDVNAAALGEFLFGEAXGLDSCLYITIGTG-IGAGAIVEGRLLQGL 149 (302)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCSS
T ss_pred HHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEcccC
Confidence 34444667888 89999998887752 4578899999974 556667799988754
No 62
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=47.01 E-value=7.2 Score=34.00 Aligned_cols=67 Identities=16% Similarity=0.195 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCC-Cc-cchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTT-SM-TGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAI 295 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s-~~-~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si 295 (325)
|...|.+.+..++++ .|+|.||.+ .. +-|.+++++.+ +........++....- ...++-+||+.
T Consensus 225 l~~~i~~l~~~~~p~-------~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~l------g~~a~~~GAa~ 291 (302)
T 3vov_A 225 VGIGLASLVKAFDPG-------VVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARL------GAEAGLLGAAL 291 (302)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSS------GGGHHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-------EEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCC------CCcHHHHHHHH
Confidence 444444444444543 388888877 55 55889999888 5543322222322221 34556678877
Q ss_pred hhc
Q 020526 296 LAK 298 (325)
Q Consensus 296 ~a~ 298 (325)
++-
T Consensus 292 l~~ 294 (302)
T 3vov_A 292 TAY 294 (302)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 63
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=46.78 E-value=10 Score=34.34 Aligned_cols=22 Identities=18% Similarity=0.357 Sum_probs=20.9
Q ss_pred cEEEecCCCCccchHHHHHHhh
Q 020526 241 NTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 241 nIil~GG~s~~~G~~~rl~~eL 262 (325)
.|++|||++.-|-+.+||++.|
T Consensus 292 ~v~vcGGGa~N~~Lm~~L~~~l 313 (370)
T 3cqy_A 292 ELFVCGGGAFNAELMQRLAALL 313 (370)
T ss_dssp EEEEESGGGGCHHHHHHHHHHC
T ss_pred EEEEECCCcCCHHHHHHHHHhC
Confidence 6999999999999999999887
No 64
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=45.35 E-value=7.6 Score=33.96 Aligned_cols=52 Identities=15% Similarity=0.181 Sum_probs=39.0
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+=+.+++| |.+.+++-+++++- +..+.++|-+|.+ +-..-+.+|..+..
T Consensus 101 ~~~l~~~~~~p-v~v~ND~~aaa~~e~~~g~~~~~~~~~~l~~GtG-iG~giv~~G~l~~G 159 (326)
T 2qm1_A 101 KEQIESALGIP-FALDNDANVAALGERWKGAGENNPDVIFITLGTG-VGGGIVAAGKLLHG 159 (326)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHHhCCC-EEEecHHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEeec
Confidence 33444556887 88999998888762 4578999999997 66767779988763
No 65
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=44.52 E-value=7.3 Score=34.26 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=38.7
Q ss_pred HHhhhhc-CCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 108 QLMFETF-NISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 108 ~~lfe~~-~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+-+.+ ++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 111 ~~l~~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~gii~~G~l~~G 169 (321)
T 3r8e_A 111 EILRSEFPHIH-FKIENDAKCAALGEYYFGENKRMQTFILLALGTG-VGSGVMMNGKLFIG 169 (321)
T ss_dssp HHHHHHCTTSE-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHHHcCCCC-EEEEchHHHHHHHHHHhCCCCCCCcEEEEEECCc-eEEEEEECCEEecC
Confidence 3444567 776 88999998887752 4678999999986 66677789998764
No 66
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=44.46 E-value=12 Score=33.63 Aligned_cols=51 Identities=20% Similarity=0.242 Sum_probs=38.0
Q ss_pred HHhhhhcCCCeEEEechhhhhhhhc---C--CceEEEEEcCCCceEEEEeecCeeccc
Q 020526 108 QLMFETFNISGFYSSEQAVLSLYAV---G--RISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 108 ~~lfe~~~~~~v~~~~~~~~a~~~~---g--~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+=+.+++| |++.+++-+++++- | ..+.++|-+|.+ +-..-|.+|.++..
T Consensus 182 ~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (380)
T 2hoe_A 182 NLLKEKYGIE-VWVENDADMGAVGEKWYTKRDDSFAWILTGKG-IGAGIIIDGELYRG 237 (380)
T ss_dssp HHHHHHHCSE-EEEEEHHHHHHHHHHHHTTCCSCEEEEEESSS-CEEEEEETTEECCC
T ss_pred HHHHHHhCCC-EEEechHHHHHHHHHHhCCCCCcEEEEEeCCc-eEEEEEECCEEecc
Confidence 3444557886 88999998887762 3 389999999986 55667789988764
No 67
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=40.63 E-value=17 Score=32.30 Aligned_cols=24 Identities=17% Similarity=0.293 Sum_probs=22.4
Q ss_pred cccEEEecCCCCccchHHHHHHhh
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL 262 (325)
.++|+++||.+....+.++|.+.+
T Consensus 250 ~~~vvlsGGVa~N~~L~~~L~~~l 273 (334)
T 3eno_A 250 KDEILMAGGVALNRRLRDMVTNMA 273 (334)
T ss_dssp CSEEEEESSGGGCHHHHHHHHHHH
T ss_pred CCeEEEcCCHHHHHHHHHHHHHHH
Confidence 478999999999999999999988
No 68
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=39.21 E-value=62 Score=27.91 Aligned_cols=67 Identities=16% Similarity=0.110 Sum_probs=38.4
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCC-ccchHHHHHHhh-ccCCCCc--ceEEeCCCCCCCCCCCceeeeehhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTS-MTGFEDRFQKEA-GLCSSAI--RPTLVKPPEYMPENLTLYSAWIGGA 294 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~-~~G~~~rl~~eL-~~~~~~~--~v~v~~~~~~~~~~~~~~~~W~G~s 294 (325)
|...|...+..++++ .|+|.||.+. .+-|.+++++.+ +...... .+.+..... ...++-+||.
T Consensus 250 L~~~i~~l~~~l~p~-------~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~------~~~a~~~GAa 316 (326)
T 2qm1_A 250 LGLATGNLGNTLNPD-------SVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAEL------GNEAGVIGAA 316 (326)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSS------GGGHHHHHHH
T ss_pred HHHHHHHHHHhcCCC-------EEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCc------CchHHHHHHH
Confidence 344444444444443 4888998875 577888888888 5433211 234433222 3355678888
Q ss_pred hhhc
Q 020526 295 ILAK 298 (325)
Q Consensus 295 i~a~ 298 (325)
.++-
T Consensus 317 ~l~~ 320 (326)
T 2qm1_A 317 SLAL 320 (326)
T ss_dssp HHGG
T ss_pred HHHH
Confidence 7764
No 69
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=38.40 E-value=17 Score=32.11 Aligned_cols=24 Identities=17% Similarity=0.342 Sum_probs=22.3
Q ss_pred cccEEEecCCCCccchHHHHHHhh
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL 262 (325)
.++|+++||.++...+.++|.+.+
T Consensus 245 ~~~vvlsGGVa~N~~l~~~l~~~l 268 (330)
T 2ivn_A 245 KDEVVLVGGVAANNRLREMLRIMT 268 (330)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred CCeEEEEccHHHHHHHHHHHHHHH
Confidence 568999999999999999999888
No 70
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=35.44 E-value=11 Score=33.04 Aligned_cols=51 Identities=10% Similarity=-0.044 Sum_probs=37.8
Q ss_pred HHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 108 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+-+.+++| |.+.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 114 ~~l~~~~~~p-v~v~NDa~aaalgE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 171 (327)
T 2ap1_A 114 ADLSARLDRD-VRLDNDANCFALSEAWDDEFTQYPLVMGLILGTG-VGGGLVLNGKPITG 171 (327)
T ss_dssp HHHHHHHTSC-EEEEEHHHHHHHHHHTSTTGGGCSEEEEEEESSS-EEEEEEETTEEECC
T ss_pred HHHHHHHCCC-EEEecHHHHHHHHHHHhCcCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 3344556888 89999998888752 3578899999986 55666789987764
No 71
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=35.10 E-value=19 Score=31.49 Aligned_cols=67 Identities=15% Similarity=0.092 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCc-cchHHHHHHhh-ccCC-C--CcceEEeCCCCCCCCCCCceeeeehh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSM-TGFEDRFQKEA-GLCS-S--AIRPTLVKPPEYMPENLTLYSAWIGG 293 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~-~G~~~rl~~eL-~~~~-~--~~~v~v~~~~~~~~~~~~~~~~W~G~ 293 (325)
|...|.+.+..++++ .|+|.||.+.. +-|.+++++.+ +... . ...+++....- ...+.-+||
T Consensus 240 La~~i~~l~~~l~p~-------~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l------~~~a~l~GA 306 (321)
T 3vgl_A 240 AGAGLADLASLFDPS-------AFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQL------GGKAGLVGA 306 (321)
T ss_dssp HHHHHHHHHHHHCCS-------EEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTT------GGGHHHHHH
T ss_pred HHHHHHHHHHHhCCC-------EEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCC------CCcHHHHHH
Confidence 444444444444544 38888888775 44578888888 5443 1 12344443332 345667788
Q ss_pred hhhhc
Q 020526 294 AILAK 298 (325)
Q Consensus 294 si~a~ 298 (325)
+.++.
T Consensus 307 a~l~~ 311 (321)
T 3vgl_A 307 ADLAR 311 (321)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77665
No 72
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=34.98 E-value=26 Score=34.95 Aligned_cols=24 Identities=21% Similarity=0.277 Sum_probs=22.2
Q ss_pred cccEEEecCCCCccchHHHHHHhh
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEA 262 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL 262 (325)
.+||+|+||.++-.-+.+++.+.|
T Consensus 706 ~~~VvLSGGVa~N~~L~~~l~~~L 729 (772)
T 4g9i_A 706 VKNVALSGGVAYNELITKMIRKVV 729 (772)
T ss_dssp CSCCCEESSTTCCHHHHHHHHHHG
T ss_pred cCEEEEEchHHHHHHHHHHHHHHH
Confidence 578999999999999999999888
No 73
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=31.32 E-value=29 Score=29.81 Aligned_cols=44 Identities=23% Similarity=0.077 Sum_probs=28.3
Q ss_pred cEEEecCCCCccchHHHHHHhh-ccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhc
Q 020526 241 NTVLCGGTTSMTGFEDRFQKEA-GLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAK 298 (325)
Q Consensus 241 nIil~GG~s~~~G~~~rl~~eL-~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~ 298 (325)
.|+|.||.+..+-|.+++++.+ +. ++.... .+ .++-.||..++.
T Consensus 242 ~IvlgGgv~~~~~~~~~l~~~~~~~-----~i~~~~-~~--------~~~~~GAa~la~ 286 (299)
T 2e2o_A 242 KVYLKGGMFRSNIYHKFFTLYLEKE-----GIISDL-GK--------RSPEIGAVILAY 286 (299)
T ss_dssp EEEEESGGGGSHHHHHHHHHHHHHT-----TCEEEC-CS--------CCHHHHHHHHHH
T ss_pred EEEEECCccCcHHHHHHHHHHCCCC-----eEeccC-CC--------CChHHHHHHHHH
Confidence 3888888776577777777777 43 344433 22 456678887764
No 74
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=30.51 E-value=2.7e+02 Score=25.91 Aligned_cols=52 Identities=17% Similarity=0.055 Sum_probs=33.7
Q ss_pred HHHHHHHHhhhhcCCC--eEEEechhhhhhhhc---CC--ceEEEEEcCCCceEEEEee
Q 020526 102 VREQLVQLMFETFNIS--GFYSSEQAVLSLYAV---GR--ISGCTVDIGHGKIDIAPVI 153 (325)
Q Consensus 102 ~r~~l~~~lfe~~~~~--~v~~~~~~~~a~~~~---g~--~tglVVdiG~~~t~v~pv~ 153 (325)
....+.+-.+++.++| -+.+++++++++++. +. .-|+++--|.+.+.+.++-
T Consensus 186 dv~~~L~~al~r~gl~v~v~aivNDtv~tll~~~y~~~~~~iglIlGTG~N~~y~e~~~ 244 (485)
T 3o8m_A 186 DVVPMLQEQIEKLNIPINVVALINDTTGTLVASLYTDPQTKMGIIIGTGVNGAYYDVVS 244 (485)
T ss_dssp BHHHHHHHHHHHTTCCEEEEEEECHHHHHHHHHHHHCTTEEEEEEESSSEEEEEEEEGG
T ss_pred cHHHHHHHHHHhcCCCceEEEEEEcHHHHHHHHhhCCCCcEEEEEEecCcceEEEeecc
Confidence 3445555666655665 368999999888765 23 3556666666677766653
No 75
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=29.99 E-value=29 Score=30.19 Aligned_cols=55 Identities=20% Similarity=0.101 Sum_probs=38.7
Q ss_pred HHHHHhhhhcCCCeEEEechhhhhhhh------cCCceEEEEEcCCCceEEEEeecCeecccc
Q 020526 105 QLVQLMFETFNISGFYSSEQAVLSLYA------VGRISGCTVDIGHGKIDIAPVIEGAVQHIA 161 (325)
Q Consensus 105 ~l~~~lfe~~~~~~v~~~~~~~~a~~~------~g~~tglVVdiG~~~t~v~pv~~G~~i~~~ 161 (325)
.+.+.+-+.+++| |++.+++-+++++ .+..+.+.|-+|. ..-..-|.||+++...
T Consensus 98 ~l~~~l~~~~~~p-v~v~NDanaaa~~e~~~~~~~~~~~~~v~~Gt-GiG~gii~~G~l~~G~ 158 (310)
T 3htv_A 98 DLADKLENTLNCP-VEFSRDVNLQLSWDVVENRLTQQLVLAAYLGT-GMGFAVWMNGAPWTGA 158 (310)
T ss_dssp THHHHHHHHHTSC-EEEEEHHHHHHHHHHHHTTCTTSCEEEEEESS-SEEEEEEETTEEECCS
T ss_pred cHHHHHHHHhCCC-EEEeeHHHHHHHHHHhhcccCCceEEEEEece-eEEEEEEECCEEeecC
Confidence 3555666778988 8888888877653 2456788889997 4555667799887643
No 76
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=28.64 E-value=28 Score=30.57 Aligned_cols=71 Identities=15% Similarity=0.080 Sum_probs=37.4
Q ss_pred HHHHHHHHHHhCChHHHHhc-cccEEEecCCCC-ccchHHHHHHhh-ccC--CC---CcceEEeCCCCCCCCCCCceeee
Q 020526 219 IVEQLVHTISTVSSENHRQL-LENTVLCGGTTS-MTGFEDRFQKEA-GLC--SS---AIRPTLVKPPEYMPENLTLYSAW 290 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l-~~nIil~GG~s~-~~G~~~rl~~eL-~~~--~~---~~~v~v~~~~~~~~~~~~~~~~W 290 (325)
|...|...+..++++....- -..|+|.||.+. .+-|.+.+++.+ +.. +. ..++.+... .. ++-
T Consensus 245 La~~i~~l~~~~~p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~--------~~-a~~ 315 (347)
T 2ch5_A 245 LGRHIVAVLPEIDPVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFFSSFTLMKL--------RH-SSA 315 (347)
T ss_dssp HHHHHHHHGGGSCGGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSCSEEEEEEE--------SS-CTH
T ss_pred HHHHHHHHHHHhcccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccCCceEEEec--------CC-ChH
Confidence 44445555555565511000 014888888764 377778888888 543 21 223333222 23 566
Q ss_pred ehhhhhhc
Q 020526 291 IGGAILAK 298 (325)
Q Consensus 291 ~G~si~a~ 298 (325)
+||..++.
T Consensus 316 ~GAa~la~ 323 (347)
T 2ch5_A 316 LGGASLGA 323 (347)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78887764
No 77
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=26.54 E-value=1.2e+02 Score=26.07 Aligned_cols=16 Identities=19% Similarity=0.106 Sum_probs=14.6
Q ss_pred eEEEEcCCCcEEEeee
Q 020526 3 AAVVDAGSKLLKAGPA 18 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a 18 (325)
.+.||+|..+++++..
T Consensus 26 ~lgiDiGgt~i~~~l~ 41 (327)
T 2ap1_A 26 YYGFDIGGTKIALGVF 41 (327)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCEEEEEEE
Confidence 5789999999999987
No 78
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=25.32 E-value=1.3e+02 Score=25.96 Aligned_cols=66 Identities=21% Similarity=0.190 Sum_probs=39.0
Q ss_pred HHHHHHHHHHhCChHHHHhccccEEEecCCCCc-cchHHHHHHhh-ccCCCC--cceEEeCCCCCCCCCCCceeeeehhh
Q 020526 219 IVEQLVHTISTVSSENHRQLLENTVLCGGTTSM-TGFEDRFQKEA-GLCSSA--IRPTLVKPPEYMPENLTLYSAWIGGA 294 (325)
Q Consensus 219 i~~~I~~~i~~~~~d~r~~l~~nIil~GG~s~~-~G~~~rl~~eL-~~~~~~--~~v~v~~~~~~~~~~~~~~~~W~G~s 294 (325)
|...|.+.+..++++ .|+|.||.+.. +-|.+++++.+ +..... .++++..... ...+.-+||+
T Consensus 248 La~~i~~l~~~ldP~-------~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l------~~~a~~~GAa 314 (321)
T 3r8e_A 248 IGESLVNIVRVMDLN-------NILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATL------ENDAGLLGAA 314 (321)
T ss_dssp HHHHHHHHHHHHCCC-------EEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSS------GGGHHHHHHH
T ss_pred HHHHHHHHHHHHCCC-------EEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCC------CCcHHHHHHH
Confidence 444444444445543 38888888865 66788888888 544321 1334443332 3456677887
Q ss_pred hhh
Q 020526 295 ILA 297 (325)
Q Consensus 295 i~a 297 (325)
.++
T Consensus 315 ~l~ 317 (321)
T 3r8e_A 315 GLI 317 (321)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 79
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=23.79 E-value=65 Score=30.04 Aligned_cols=47 Identities=17% Similarity=0.087 Sum_probs=32.8
Q ss_pred cccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
.+.|+++||.++-+-+.+.+.+-+ ..++.+....+ ++=+|++++|..
T Consensus 394 ~~~i~~~GG~a~s~~~~Qi~Adv~-----g~pV~~~~~~e---------~~alGaA~lA~~ 440 (497)
T 2zf5_O 394 IKELRVDGGATANDFLMQFQADIL-----NRKVIRPVVKE---------TTALGAAYLAGL 440 (497)
T ss_dssp CCCEEEESGGGGCHHHHHHHHHHH-----TSCEEEESCSC---------HHHHHHHHHHHH
T ss_pred cceEEEeCccccCHHHHHHHHhhc-----CCeEEEcCCCc---------chHHHHHHHHHH
Confidence 467999999999888887776666 34555543332 466788888764
No 80
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=23.63 E-value=49 Score=29.00 Aligned_cols=48 Identities=17% Similarity=0.153 Sum_probs=36.5
Q ss_pred hhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 111 FETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 111 fe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
-+.+++| |.+.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 128 ~~~~~~p-v~v~NDa~aaal~E~~~g~~~~~~~~v~i~~GtG-iG~gii~~G~l~~G 182 (343)
T 2yhw_A 128 SDTLHLP-VWVDNDGNCAALAERKFGQGKGLENFVTLITGTG-IGGGIIHQHELIHG 182 (343)
T ss_dssp HHHHCSC-EEEEEHHHHHHHHHHHTSTTTTCSCEEEEEESSS-EEEEEEETTEECCC
T ss_pred HHHHCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCC-EEEEEEECCEEecC
Confidence 3456887 88899988887752 4578999999986 56667789987753
No 81
>2jsh_A Appetite-regulating hormone, obestatin; micellar solution, DPC, SDS, alternative splicing, amidation, lipoprotein, secreted; NMR {Synthetic} PDB: 2jsj_A
Probab=23.55 E-value=16 Score=19.30 Aligned_cols=13 Identities=23% Similarity=0.542 Sum_probs=10.6
Q ss_pred eeeeHHHHhhcCc
Q 020526 305 QHITKADYDESGP 317 (325)
Q Consensus 305 ~~itk~ey~e~G~ 317 (325)
.-+|-+||+|+|.
T Consensus 9 i~ls~~~y~~yG~ 21 (26)
T 2jsh_A 9 IKLSGAQYQQHGR 21 (26)
T ss_dssp GGGHHHHCSCSSS
T ss_pred eEecHHHHHHHhH
Confidence 4578899999985
No 82
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=22.33 E-value=1.6e+02 Score=26.69 Aligned_cols=52 Identities=13% Similarity=0.204 Sum_probs=39.0
Q ss_pred HHHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 107 VQLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 107 ~~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
.+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 201 ~~~L~~~~~~p-V~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 259 (429)
T 1z05_A 201 GPEIYKATGLP-VFVANDTRAWALAEKLFGHSQDVDNSVLISIHHG-LGAGIVLDGRVLQG 259 (429)
T ss_dssp HHHHHHHHCSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEECCT
T ss_pred HHHHHHHhCCC-EEEechhHHHHHHHHHhCCCCCCCcEEEEEECCc-EEEEEEECCEEeeC
Confidence 33444557887 88999998888762 4578999999986 56677789987764
No 83
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=22.33 E-value=52 Score=30.58 Aligned_cols=50 Identities=8% Similarity=0.072 Sum_probs=37.8
Q ss_pred cEEEecCCCCccchHHHHHHhh-ccCCC------CcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 241 NTVLCGGTTSMTGFEDRFQKEA-GLCSS------AIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 241 nIil~GG~s~~~G~~~rl~~eL-~~~~~------~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
.|.+-||....|+|.+++++.+ .+.+. ..++.+.... .++=+||+++|..
T Consensus 386 ~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~---------dgsg~GAAl~aa~ 442 (457)
T 2yhx_A 386 HIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAI---------DGXGAASXVIXSI 442 (457)
T ss_dssp EEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECC---------CTTTHHHHHHHHH
T ss_pred EEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECC---------CchhhhHHHHHHH
Confidence 4778888888999999999999 77643 3456665443 3677899988875
No 84
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=22.23 E-value=1.3e+02 Score=26.13 Aligned_cols=16 Identities=31% Similarity=0.358 Sum_probs=14.5
Q ss_pred eEEEEcCCCcEEEeee
Q 020526 3 AAVVDAGSKLLKAGPA 18 (325)
Q Consensus 3 ~vViD~Gs~~~k~G~a 18 (325)
.|.||+|..++|++..
T Consensus 32 ~lgiDiGgt~i~~~l~ 47 (343)
T 2yhw_A 32 ALAVDLGGTNLRVAIV 47 (343)
T ss_dssp EEEEEECSSEEEEEEE
T ss_pred EEEEEECCCEEEEEEE
Confidence 5789999999999987
No 85
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=21.80 E-value=1.6e+02 Score=26.29 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=38.4
Q ss_pred HHhhhhcCCCeEEEechhhhhhhhc-------CCceEEEEEcCCCceEEEEeecCeeccc
Q 020526 108 QLMFETFNISGFYSSEQAVLSLYAV-------GRISGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 108 ~~lfe~~~~~~v~~~~~~~~a~~~~-------g~~tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+-+.+++| |++.+++-+++++- +..+.++|-+|.+ .-..-|.+|.++..
T Consensus 180 ~~l~~~~~~p-v~v~NDa~aaalaE~~~g~~~~~~~~v~l~~GtG-iG~giv~~G~l~~G 237 (406)
T 1z6r_A 180 EALEQHTGVP-VYIQHDISAWTMAEALFGASRGARDVIQVVIDHN-VGAGVITDGHLLHA 237 (406)
T ss_dssp HHHHHHHSSC-EEEEEHHHHHHHHHHHHSTTTTCSSEEEEEESSS-EEEEEEETTEETTT
T ss_pred HHHHHHHCCC-EEEechhHHHHHHHHHhcCCCCCCcEEEEEECCc-EEEEEEECCEEeec
Confidence 3344557887 88899998887752 4578999999986 66777789988764
No 86
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=21.66 E-value=2.2e+02 Score=23.64 Aligned_cols=53 Identities=17% Similarity=0.157 Sum_probs=38.8
Q ss_pred HHHHhhhhcCCCeEEEechhhhhhhhc---C----Cc-eEEEEEcCCCceEEEEeecCeeccc
Q 020526 106 LVQLMFETFNISGFYSSEQAVLSLYAV---G----RI-SGCTVDIGHGKIDIAPVIEGAVQHI 160 (325)
Q Consensus 106 l~~~lfe~~~~~~v~~~~~~~~a~~~~---g----~~-tglVVdiG~~~t~v~pv~~G~~i~~ 160 (325)
+.+.+=+.+++| |++.+++-+++++- | .. +.++|-+|.+ .-..-|.||.++..
T Consensus 106 l~~~l~~~~~~p-V~v~NDanaaalaE~~~g~~~~~~~~~~~l~~GtG-IG~giv~~G~l~~G 166 (267)
T 1woq_A 106 IDALLTARLGRP-VEVINDADAAGLAEARYGAGAGVKGTVLVITLGTG-IGSAFIFDGKLVPN 166 (267)
T ss_dssp HHHHHHHHHTSC-EEEEEHHHHHHHHHHHHSTTTTCCSEEEEEEESSS-EEEEEEETTEEETT
T ss_pred HHHHHHHHHCCC-EEEeehhHHHHHHHHHhCCCCCCCCcEEEEEECcc-eEEEEEECCEEccC
Confidence 344454667888 89999998888762 2 23 5688999985 77777889987764
No 87
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=21.38 E-value=54 Score=31.79 Aligned_cols=42 Identities=0% Similarity=0.001 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhccCCCCCCCceEEEEcCCCCCHHHHHHHHHHhhhhcC
Q 020526 67 AMEDLLHHVLYAGLGWEEGNEGQILFTDPLCSPKAVREQLVQLMFETFN 115 (325)
Q Consensus 67 ~~~~il~~~~~~~l~~~~~~~~~vll~~~~~~~~~~r~~l~~~lfe~~~ 115 (325)
.++.|=+|+|. . +++||+|+...-++..++++|++++-|.||
T Consensus 237 v~~~I~~~AF~------~-s~yPvilslE~Hc~~~qQ~~ma~~~~~~~g 278 (624)
T 1djx_A 237 VLRAIRDYAFK------A-SPYPVILSLENHCSLEQQRVMARHLRAILG 278 (624)
T ss_dssp HHHHHHHHTTT------S-CSSCEEEEEEEECCHHHHHHHHHHHHHHHG
T ss_pred HHHHHHHhccc------C-CCCCEEEEecccCCHHHHHHHHHHHHHHHh
Confidence 45555555553 3 789999999988899999999999988776
No 88
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=21.00 E-value=97 Score=28.67 Aligned_cols=48 Identities=15% Similarity=0.185 Sum_probs=32.8
Q ss_pred cccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 239 LENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 239 ~~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
.+.|.++||.++-+-+.+.+.+-+ ..++.+....+ .++=+|++++|..
T Consensus 387 ~~~i~~~GG~a~s~~~~Qi~Adv~-----g~pV~~~~~~e--------~~~alGAA~lA~~ 434 (484)
T 2itm_A 387 PQSVTLIGGGARSEYWRQMLADIS-----GQQLDYRTGGD--------VGPALGAARLAQI 434 (484)
T ss_dssp CSCEEEESGGGCCHHHHHHHHHHH-----CCCEEEESCTT--------SCHHHHHHHHHHH
T ss_pred cceEEEEeccccCHHHHHHHHHHh-----CCeEEeCCCCC--------cccHHHHHHHHHH
Confidence 356999999999888887777666 34555543332 3356688888754
No 89
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=20.51 E-value=23 Score=31.65 Aligned_cols=47 Identities=11% Similarity=0.049 Sum_probs=32.8
Q ss_pred hhcCCCeEEEechhhhhhhh----------------c--------------C----CceEEEEEcCCCceEEEEeecCee
Q 020526 112 ETFNISGFYSSEQAVLSLYA----------------V--------------G----RISGCTVDIGHGKIDIAPVIEGAV 157 (325)
Q Consensus 112 e~~~~~~v~~~~~~~~a~~~----------------~--------------g----~~tglVVdiG~~~t~v~pv~~G~~ 157 (325)
+.+++..|.+.++.-+++++ . | ..+.++|-+|.+ .-..-|.+|.+
T Consensus 125 ~~~~~~pv~v~NDa~aaalge~~l~~~~~~~~~~~E~~~~~~~~~~~~~~~g~~~~~~~~~~v~~GTG-iG~gii~~g~l 203 (373)
T 2q2r_A 125 ALFPPGHSAILNDLEAGGFGVLAVSDAHVFSEYFGVMWEGTQWRTCEQEPAGSVIGRGRCLVLAPGTG-LGSSLIYYNPP 203 (373)
T ss_dssp TTSCTTSEEEEEHHHHHHHHHHHHHHTTCHHHHEEEEECCTTTTTTCSSCTTSSCCSSCEEEEEESSS-EEEEEEEECC-
T ss_pred HhcCCCCEEEEccHhHHhccccccChhhhccccchhhcccccccccccCCCcCcCCCCCEEEEEeCCc-eeEEEEecCcc
Confidence 33787569999999998888 2 3 268899999986 44556667876
Q ss_pred cc
Q 020526 158 QH 159 (325)
Q Consensus 158 i~ 159 (325)
..
T Consensus 204 ~~ 205 (373)
T 2q2r_A 204 MN 205 (373)
T ss_dssp --
T ss_pred cC
Confidence 54
No 90
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=20.41 E-value=83 Score=29.25 Aligned_cols=46 Identities=17% Similarity=0.146 Sum_probs=32.4
Q ss_pred ccEEEecCCCCccchHHHHHHhhccCCCCcceEEeCCCCCCCCCCCceeeeehhhhhhcc
Q 020526 240 ENTVLCGGTTSMTGFEDRFQKEAGLCSSAIRPTLVKPPEYMPENLTLYSAWIGGAILAKV 299 (325)
Q Consensus 240 ~nIil~GG~s~~~G~~~rl~~eL~~~~~~~~v~v~~~~~~~~~~~~~~~~W~G~si~a~l 299 (325)
+.|+++||.|+-+-+.+.+.+-+ ..++.+...++ ++=+|++++|..
T Consensus 400 ~~i~~~GG~a~n~~~~q~~Adv~-----g~pV~~~~~~e---------~~alGaA~la~~ 445 (495)
T 2dpn_A 400 KVLKADGGMAQNRLFLKIQADLL-----GVPVAVPEVTE---------TTALGAALMAGV 445 (495)
T ss_dssp CCEEEESGGGGCHHHHHHHHHHH-----TSCEEEESCSC---------HHHHHHHHHHHH
T ss_pred cEEEEecccccCHHHHHHHHHHh-----CCeeEecCCcc---------cHHHHHHHHHHh
Confidence 56999999999888887777666 34555544332 455688888754
No 91
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=20.01 E-value=2.1e+02 Score=24.35 Aligned_cols=53 Identities=13% Similarity=0.303 Sum_probs=37.5
Q ss_pred ccccCCeecCHHHHHHHHHHHHHhccCCCCCCCceEEEE----cCCCCCHHHHHHHHHHhhhhcC
Q 020526 55 DPVVRGFIRDWDAMEDLLHHVLYAGLGWEEGNEGQILFT----DPLCSPKAVREQLVQLMFETFN 115 (325)
Q Consensus 55 ~p~~~g~i~d~~~~~~il~~~~~~~l~~~~~~~~~vll~----~~~~~~~~~r~~l~~~lfe~~~ 115 (325)
.|+...- .|++.+++++++.+.. ++ +-+++. |....+.++|.++.+.+.|..+
T Consensus 12 TPf~~dg-iD~~~l~~lv~~li~~--Gv-----~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~ 68 (291)
T 3a5f_A 12 TPFTNTG-VDFDKLSELIEWHIKS--KT-----DAIIVCGTTGEATTMTETERKETIKFVIDKVN 68 (291)
T ss_dssp CCBCSSS-BCHHHHHHHHHHHHHT--TC-----CEEEESSGGGTGGGSCHHHHHHHHHHHHHHHT
T ss_pred cCcCCCC-cCHHHHHHHHHHHHHc--CC-----CEEEECccccChhhCCHHHHHHHHHHHHHHhC
Confidence 6785333 8999999999998754 21 223332 4455688999999999988654
Done!