BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 020531
(325 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 339 bits (869), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 186/340 (54%), Positives = 235/340 (69%), Gaps = 28/340 (8%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDL-DPPP-- 57
MA+RVT +S YVA+++A SAG R G T RS E RPR H++ D+ D P
Sbjct: 1 MAIRVTFTYSSYVARSIASSAGTRVG--TGDVRSCFETWVRPRFCGHNQIPDIVDKSPGS 58
Query: 58 -NYQPKANYRC-------NTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVF 109
+ P + R +T+A EI +G C SP+++G++SLM T P + M
Sbjct: 59 NTWGPSSGPRARPASSMYSTIAREILEEG-CKSPLVLGMISLMNLTGA---PQFSGMTGL 114
Query: 110 GISPFKAASIIPFLQGSKWLPCNEPGTVP-ESDYVDKGGTT--DKIQFSGSENL-NGVSL 165
GISPFK +S+IPFL+GSKW+PC+ P T+ + VD+GG K++ S+ + NG
Sbjct: 115 GISPFKTSSVIPFLRGSKWMPCSIPATLSTDIAEVDRGGKVCDPKVKLELSDKVSNG--- 171
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
W++KLLN+CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLDVGDR++A
Sbjct: 172 ----GNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRVIA 227
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
EKVSYFF++PEVSDIVIF+APPIL E G+S DVFIKRIVA+ GD VEV GKLLVN
Sbjct: 228 EKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVNDTV 287
Query: 286 QDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNW 325
Q EDF+LEP+ YEM+P+ VPEGYVFVLGDNRN SFDSHNW
Sbjct: 288 QAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNW 327
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 329 bits (844), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 183/328 (55%), Positives = 229/328 (69%), Gaps = 31/328 (9%)
Query: 1 MALRVTVNFSGYVAQNLAHSAGIRFGFSTTSTRSFHECLFRPRVFCHSKKTDLDPPPNYQ 60
MA+R+T +S +VA+NL G R G E L RPR F H K D D P +
Sbjct: 1 MAIRITFTYSTHVARNLV---GTRVGPGGYC----FESLVRPRFFSH--KRDFDRSPRNR 51
Query: 61 PKANYRCNTLAAEIFGDGACNSPILMGLVSLMKSTAGMPGPSATSMGVFGISPFKAASII 120
P + Y ++A E+ G+G+ SP++MGL+S++KST G +++M V G+S FKA+SII
Sbjct: 52 PASMY--GSIARELIGEGS-QSPLVMGLISILKSTTGH---ESSTMNVLGVSSFKASSII 105
Query: 121 PFLQGSKWLPCNEPGTVPESDYVDKGGTTDKIQFSGSENLNGVSLQLKTSGSWLSKLLNV 180
PFLQGSKW+ P D VDKGGT E+ NG S W++KLL+V
Sbjct: 106 PFLQGSKWI-----KNPPVIDDVDKGGTVCDDD-DDKESRNGGS-------GWVNKLLSV 152
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDI 240
CS+DAKAAFTA+TVS LF+S LAEP+SIPS SM PTLD GDR++AEKVSYFF++PEVSDI
Sbjct: 153 CSEDAKAAFTAVTVSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDI 212
Query: 241 VIFRAPPIL---QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAY 297
VIF+APPIL E G+SS DVFIKRIVA+ GD VEV GKL VN + Q+EDF+LEP++Y
Sbjct: 213 VIFKAPPILLEYPEYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSY 272
Query: 298 EMDPVVVPEGYVFVLGDNRNNSFDSHNW 325
EM+P+ VP+GYVFVLGDNRN SFDSHNW
Sbjct: 273 EMEPMFVPKGYVFVLGDNRNKSFDSHNW 300
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 211 bits (538), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 96/160 (60%), Positives = 123/160 (76%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
+++ + L+ SDDA+ F A+ VS F+ F+AEPR IPS SM PT DVGDR++A
Sbjct: 96 EVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVA 155
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
EKVSY+F++P +DIVIF++PP+LQE+G++ DVFIKRIVA GD VEVH GKL+VNGVA
Sbjct: 156 EKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVA 215
Query: 286 QDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNW 325
++E FILEP YEM P+ VPE VFV+GDNRNNS+DSH W
Sbjct: 216 RNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVW 255
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 67/127 (52%), Positives = 87/127 (68%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
+ F+AEPR IPS SM PTL+ GDR++ EKVSY F P+V DI++F P +LQ G+ G
Sbjct: 31 RFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQ 90
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVPEGYVFVLGDNRNN 318
FIKR++A G VEV+ G + +G E++ILEP Y + V VP+G VFV+GDNRNN
Sbjct: 91 AFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNN 150
Query: 319 SFDSHNW 325
S DSH W
Sbjct: 151 SNDSHVW 157
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 131 bits (329), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 89/147 (60%), Gaps = 2/147 (1%)
Query: 179 NVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS 238
N + K TA+ ++ ++F+AE R IPS+SM PTL + DR++ EK+SY + PE
Sbjct: 19 NTWLELGKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERG 78
Query: 239 DIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYE 298
+IV+F L+ F D FIKRI+ GD V V G + VNG DE++I P AYE
Sbjct: 79 EIVVFNPTDALKAKNFH--DAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYE 136
Query: 299 MDPVVVPEGYVFVLGDNRNNSFDSHNW 325
PV VP+ VLGDNRNNS+DSH W
Sbjct: 137 YGPVKVPDDQYLVLGDNRNNSYDSHYW 163
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 124 bits (311), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 87/140 (62%)
Query: 186 KAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRA 245
K ++ ++ ++F+AE R IPS SM PTL+V DR++ EK+SY F P DI++F
Sbjct: 33 KTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIVFHP 92
Query: 246 PPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPVVVP 305
L++ S + FIKR++ G+ V+V GG++L+NG +E++I P Y+ P VP
Sbjct: 93 TEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPEKVP 152
Query: 306 EGYVFVLGDNRNNSFDSHNW 325
VLGDNRNNS+DSH W
Sbjct: 153 ADSFLVLGDNRNNSYDSHFW 172
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 86.3 bits (212), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 96/213 (45%), Gaps = 49/213 (23%)
Query: 151 KIQFSGSENLNGVSLQLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPS 210
++ + +E GVS K S W +L A A+ + ++ +F+A P IPS
Sbjct: 32 EVSETAAEAAIGVSEPKKRSALWEFAIL---------AVIAIGLYYVMLTFVARPYLIPS 82
Query: 211 ASMNPTLD-----VGDRILAEKVSYFFKRPEVSDIVIFRAPP------------------ 247
SM PTL VGDRI+ +K++Y F P+ D+++F+ PP
Sbjct: 83 ESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGDVIVFKGPPSWNTMYKSIRSNNIVLRS 142
Query: 248 ---ILQEIGFSSGDV--FIKRIVATAGDCVEVHGGK-LLVNG----------VAQDEDFI 291
L +GF D +KR++A G V+ L VNG V + D
Sbjct: 143 VQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRSDTGLTVNGKPLKEPYLRPVTMNADLS 202
Query: 292 LEP-LAYEMDPVVVPEGYVFVLGDNRNNSFDSH 323
P L E PV VP+G ++V+GDNR +S DS
Sbjct: 203 FSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSR 235
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 85.9 bits (211), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/180 (34%), Positives = 84/180 (46%), Gaps = 42/180 (23%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLD-----VGDRILAEKVSYFFKRPEVSD 239
A A A+ + ++ +F+A P IPS SM PTL VGDRI+ +K+SY F P+ D
Sbjct: 69 AVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTCVGDRIMVDKLSYRFGSPQPGD 128
Query: 240 IVIFRAPP---------------------ILQEIGFSSGDV--FIKRIVATAGDCVEVHG 276
+++FR PP L IGF D +KR++A G V+
Sbjct: 129 VIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPPDENDLVKRVIAVGGQTVQCRS 188
Query: 277 GK-LLVNGVAQDEDFILEP------------LAYEMDPVVVPEGYVFVLGDNRNNSFDSH 323
L VNG E + L+P L E PV VP G V+V+GDNR +S DS
Sbjct: 189 DTGLTVNGRPLKEPY-LDPATMMADPSIYPCLGSEFGPVTVPPGRVWVMGDNRTHSADSR 247
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 84/183 (45%), Gaps = 50/183 (27%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK----------- 233
K+ F L + + +SFL EP IPS SM PTL+VGD IL K +Y +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPI 122
Query: 234 -RPEVSDIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNG------- 283
P+ D+++FR P S ++ +IKR+V GD V K L VNG
Sbjct: 123 GDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKL 174
Query: 284 -----------------VAQDEDFILEPLA-YEMDP---VVVPEGYVFVLGDNRNNSFDS 322
+ Q E I + ++ Y ++P +P G+ F++GDNR+NS DS
Sbjct: 175 VGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDS 234
Query: 323 HNW 325
W
Sbjct: 235 RYW 237
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 78/169 (46%), Gaps = 18/169 (10%)
Query: 166 QLKTSGSWLSKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILA 225
Q TS + + N + KA A+ ++ L + FL EP + +SM PTL G+R+
Sbjct: 5 QKPTSEKSVKRKSNTYWEWGKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFV 64
Query: 226 EKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVA 285
K + E DIVI G +S ++KR++ G+ VE+ L +NG
Sbjct: 65 NKSVNYIGEIERGDIVIIN--------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKK 116
Query: 286 QDEDFILE----------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
E ++ L + PV VP+G FV+GDNR NS DS N
Sbjct: 117 IAEPYLASNKKEAKKLGVNLTGDFGPVKVPKGKYFVMGDNRLNSMDSRN 165
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 82/183 (44%), Gaps = 50/183 (27%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVS------ 238
K+ F L + + +SFL EP IPS SM PTLDVGD IL K SY + P +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEV 122
Query: 239 ------DIVIFRAPPILQEIGFSSGDV-FIKRIVATAGDCVEVHGGK-LLVNGVAQDEDF 290
D+++FR P S +V +IKR+V GD V K L +NG + E
Sbjct: 123 GDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKL 174
Query: 291 I----------------LEPLAYEMDPVV------------VPEGYVFVLGDNRNNSFDS 322
+ L + +E+ + VP G+ F++GDNR+NS DS
Sbjct: 175 LGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDS 234
Query: 323 HNW 325
W
Sbjct: 235 RYW 237
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 75.9 bits (185), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 18/150 (12%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
KA A+ ++ L ++FL EP + SM+PTL G+R+ K + + DIVI
Sbjct: 17 VKAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERLFVYKTVRYVGEFKRGDIVIID 76
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------P 294
G ++KR++ GD V++ L +NG E ++ E
Sbjct: 77 --------GDEKNVHYVKRLIGLPGDTVQMKDDTLYINGKKVSEPYLSENRKEAEAVGVK 128
Query: 295 LAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + PV VPEG FV+GDNR S DS N
Sbjct: 129 LTGDFGPVKVPEGKYFVMGDNRQRSMDSRN 158
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 18/160 (11%)
Query: 175 SKLLNVCSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKR 234
K N + KA A+ ++ L + FL EP + +SM PTL G+R+ K +
Sbjct: 14 KKKTNTYLEWGKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGE 73
Query: 235 PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE- 293
+ DIVI G +S ++KR++ G+ V++ L +NG E ++ +
Sbjct: 74 LKRGDIVIIN--------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKN 125
Query: 294 ---------PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + PV VP+G FV+GDNR NS DS N
Sbjct: 126 KKEAEKLGVSLTGDFGPVKVPKGKYFVMGDNRLNSMDSRN 165
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 73/155 (47%), Gaps = 24/155 (15%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYF---FKRPEVSD 239
D KA AL + FL ++FL EP + SM PTL +R+ K + FKR D
Sbjct: 14 DWIKAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERLFVNKFVKYTGDFKR---GD 70
Query: 240 IVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE------ 293
IV+ G ++KR++ GD +E+ L VNG +E+++ E
Sbjct: 71 IVVLN--------GEEKKTHYVKRLIGLPGDTIEMKNDNLFVNGKRFNEEYLKENKKDAH 122
Query: 294 ----PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + P+ VP+ FV+GDNR NS DS N
Sbjct: 123 DSDLNLTGDFGPIKVPKDKYFVMGDNRQNSMDSRN 157
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 72.0 bits (175), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 69/151 (45%), Gaps = 21/151 (13%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
AKA A+ ++ L ++F+ P + SM PTL +R+ + + DIV+
Sbjct: 16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLN 75
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFI-----------LE 293
+ ++KRI+ GD VE+ +L +NG DE ++ +
Sbjct: 76 GDDVH----------YVKRIIGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFD 125
Query: 294 PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + PV VP+ FV+GDNR NS DS N
Sbjct: 126 HLTDDFGPVKVPDNKYFVMGDNRRNSMDSRN 156
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ V Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 66/152 (43%), Gaps = 27/152 (17%)
Query: 190 TALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPIL 249
A + F+ F+ P +I SM+PTL G+R+ + Y E ++V+F A
Sbjct: 14 VAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA---- 69
Query: 250 QEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMDPV------- 302
+ D ++KR++ GD VE L VNG QDE ++ L ++
Sbjct: 70 -----NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGTFQV 124
Query: 303 -----------VVPEGYVFVLGDNRNNSFDSH 323
V+P+G VLGDNR S DS
Sbjct: 125 KDLPNANPKSNVIPKGKYLVLGDNREVSKDSR 156
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 185 AKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFR 244
KA A+ ++ L ++FL EP + SM+PTL +R+ K + + DI+I
Sbjct: 17 GKAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKRGDIIILN 76
Query: 245 APPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE----------P 294
G ++KR++ GD VE+ L +NG E ++
Sbjct: 77 --------GKEKSTHYVKRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGIN 128
Query: 295 LAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + P+ VP+ FV+GDNR S DS N
Sbjct: 129 LTGDFGPIKVPKDKYFVMGDNRQESMDSRN 158
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 66.2 bits (160), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 67/152 (44%), Gaps = 20/152 (13%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVI 242
D AKA A+ ++ L ++FL P + SM PTL +RI + + IV+
Sbjct: 16 DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75
Query: 243 FRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILE--------- 293
+ ++KRI+ GD V++ +L +NG E ++
Sbjct: 76 LNG----------ENEHYVKRIIGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDG 125
Query: 294 -PLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
L + PV VP+ FV+GDNR NS DS N
Sbjct: 126 YTLTDDFGPVKVPDDKYFVMGDNRRNSMDSRN 157
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 62.0 bits (149), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 75/191 (39%), Gaps = 54/191 (28%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPP- 247
F + + ++A+ +IPSASM PTL VGD IL K+ Y P D+++F+ P
Sbjct: 9 FLIILAVLFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIVFKYPKN 68
Query: 248 ----ILQEIGFSSGD-------------VFIKRIVATAG--------------DCVEVH- 275
++ I GD V I ++ DC +
Sbjct: 69 PDIDFIKRIIARGGDTVEFFPYYDEKNNVLIYKVAVNGKLYELTYEGEKNYSYDCYQYRE 128
Query: 276 -----GGKLLVNGVAQDEDFILEP------------LAYEMD----PVVVPEGYVFVLGD 314
G+++ + V + P L Y D VVPEGY FV+GD
Sbjct: 129 KLYREDGEVIQHSVCFRNTLLKVPGMVYNAISSDLCLKYNEDGFCVKFVVPEGYYFVMGD 188
Query: 315 NRNNSFDSHNW 325
NR+NS DS W
Sbjct: 189 NRDNSQDSRFW 199
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 64/133 (48%), Gaps = 23/133 (17%)
Query: 207 SIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVA 266
+ SMNPT G+ +L K S+ FK DIV+F+ P V IKR++
Sbjct: 29 KVEGVSMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP---------DHKVLIKRVIG 79
Query: 267 TAGDCVEVHGGKLLVNGVAQDEDFI--LEPLA--------YEMDPVV----VPEGYVFVL 312
G+ ++ +L VNG E F+ L+ ++ + + V VP+G FV+
Sbjct: 80 LPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFSLKDVTGTSKVPKGKYFVV 139
Query: 313 GDNRNNSFDSHNW 325
GDNR SFDS ++
Sbjct: 140 GDNRIYSFDSRHF 152
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 80/213 (37%), Gaps = 76/213 (35%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY------------FFKRPE 236
F L + F+ ++F+ EP IPS SM PTL GD IL +K SY F P+
Sbjct: 59 FPILIIVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPK 118
Query: 237 VSDIVIFRAPP-----ILQEIGFSSGD-----VFIKRIVATAGDCVEVHGGKLLV----- 281
DIV+F+ P ++ I GD + KR+ T + E H + +
Sbjct: 119 RGDIVVFKHPNNNAINYVKRIVGLPGDKINYNILTKRLTITPNNINEQHTKNISINYKYI 178
Query: 282 --------------------------NGVAQDEDF--ILEPLAYEM-------------- 299
N + Q E + +E +AY +
Sbjct: 179 KPNDFTKHFKLNNIILNNVHSLESSNNNLLQLEMYQEKIEKIAYNIFFKKKLIDQKDLYF 238
Query: 300 -------DPVVVPEGYVFVLGDNRNNSFDSHNW 325
+VP+ FVLGDNR+NS DS W
Sbjct: 239 KQFSQKQGTWIVPKHKYFVLGDNRDNSLDSRYW 271
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 23/141 (16%)
Query: 196 FLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFS 255
F + +P I +SM PTL +RIL +K + DI++
Sbjct: 30 FTIRLVFYKPFLIEGSSMAPTLKDSERILVDKAVKWTGGFHRGDIIVIHDK--------K 81
Query: 256 SGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDEDFILEPLAYEMD------------PVV 303
SG F+KR++ GD +++ +L +N +E ++ E Y+ + V
Sbjct: 82 SGRSFVKRLIGLPGDSIKMKNDQLYINDKKVEEPYLKE---YKQEVKESGVTLTGDFEVE 138
Query: 304 VPEGYVFVLGDNRNNSFDSHN 324
VP G FV+GDNR NS DS N
Sbjct: 139 VPSGKYFVMGDNRLNSLDSRN 159
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKR------------ 234
+ F + F+ +SF+ EP IPS SM PTL +GD IL +K SY K
Sbjct: 63 SLFPTFFIVFIIRSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGIKEPITNKTIIKMNL 122
Query: 235 PEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVE 273
P+ DIV+F+ P + +IKR+V GD ++
Sbjct: 123 PQRGDIVVFKHP--------KNNIDYIKRVVGLPGDKIQ 153
Score = 33.5 bits (75), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 303 VVPEGYVFVLGDNRNNSFDSHNW 325
+VP+ F++GDNR+NS DS W
Sbjct: 251 IVPKNKYFMMGDNRDNSLDSRYW 273
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 29/153 (18%)
Query: 189 FTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPI 248
F A+ V + F+ + SM PTL+ G+ ++ K+SY DI++F A
Sbjct: 15 FVAVCVVATLRLFVFSNYVVEGKSMMPTLESGNLLIVNKLSYDIGPIRRFDIIVFHA--- 71
Query: 249 LQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNGVAQDE-----------------DFI 291
+ + ++KR++ GD + L VNG DE DF
Sbjct: 72 ------NKKEDYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFT 125
Query: 292 LEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHN 324
LE + + VP G +FVLGDNR +S+DS +
Sbjct: 126 LEEVTGKTR---VPPGCIFVLGDNRLSSWDSRH 155
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 44/90 (48%), Gaps = 19/90 (21%)
Query: 196 FLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFS 255
F+ +SF+ EP IPS SM PTL VGD IL EK SY K P I+I P +
Sbjct: 72 FIIRSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKP-------N 124
Query: 256 SGDV------------FIKRIVATAGDCVE 273
GD+ +IKRI+ GD +
Sbjct: 125 RGDIAVFQHPTDHNINYIKRIIGLPGDKIR 154
Score = 36.6 bits (83), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 244 RAPPILQEIGFSSGD-------VFIKRIVATAGDCVE-VHGGKLLVNGVAQDEDFILEPL 295
R+ +Q+I FS+ + ++ + +E V LL+N + ++ +
Sbjct: 186 RSSNFIQKIYFSNKNNIKEDKNIYNSLYFDIVEEIIEDVKHSILLLNSIKNTKENYFQQK 245
Query: 296 AYEMDPVVVPEGYVFVLGDNRNNSFDSHNW 325
+VP+G F++GDNR+NS DS W
Sbjct: 246 NMPKLTWIVPKGEYFMMGDNRDNSLDSRYW 275
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK--------- 233
+ + F L + + +SFL EP IPS SM PTL +GD IL EK +Y K
Sbjct: 62 ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLI 121
Query: 234 ---RPEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD +
Sbjct: 122 ETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 13/64 (20%)
Query: 267 TAGDCVEVHGGKLLVNGVAQDEDFIL-----EPLAYEMDPVVVPEGYVFVLGDNRNNSFD 321
T GD ++L+ +AQD+ + +PLA VVP G F++GDNR+NS D
Sbjct: 230 TLGDVTH----RILMVPIAQDQLGMYYQQPGQPLATW----VVPPGQYFMMGDNRDNSAD 281
Query: 322 SHNW 325
S W
Sbjct: 282 SRYW 285
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/104 (35%), Positives = 49/104 (47%), Gaps = 23/104 (22%)
Query: 183 DDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK--------- 233
+ + F L + + +SFL EP IPS SM PTL +GD IL EK +Y K
Sbjct: 62 ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLI 121
Query: 234 ---RPEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD +
Sbjct: 122 ETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 13/64 (20%)
Query: 267 TAGDCVEVHGGKLLVNGVAQDEDFIL-----EPLAYEMDPVVVPEGYVFVLGDNRNNSFD 321
T GD ++L+ +AQD+ + +PLA VVP G F++GDNR+NS D
Sbjct: 230 TLGDVTH----RILMVPIAQDQLGMYYQQPGQPLATW----VVPPGQYFMMGDNRDNSAD 281
Query: 322 SHNW 325
S W
Sbjct: 282 SRYW 285
>sp|P44454|LEP_HAEIN Signal peptidase I OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=lepB PE=3 SV=1
Length = 349
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 55/123 (44%), Gaps = 31/123 (25%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------- 233
S+ + F L V FL +SFL EP IPS SM TL VGD ++ K +Y K
Sbjct: 84 ASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIFQNT 143
Query: 234 -----RPEVSDIVIFRAP--------------PILQEIGFSSGDV-----FIKRIVATAG 269
+P+ D+++F+AP + + SS D +IKRIV G
Sbjct: 144 IIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVGKGG 203
Query: 270 DCV 272
D V
Sbjct: 204 DRV 206
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 13/23 (56%), Positives = 18/23 (78%)
Query: 303 VVPEGYVFVLGDNRNNSFDSHNW 325
+VPEG FV+GD+R++S DS W
Sbjct: 287 LVPEGQYFVMGDHRDHSDDSRFW 309
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 23/100 (23%)
Query: 187 AAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFK------------R 234
+ F L + + +SF+ EP IPS SM PTL +GD IL EK +Y K
Sbjct: 66 SVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKDPIYQKTLIETGH 125
Query: 235 PEVSDIVIFRAP--PILQEIGFSSGDVFIKRIVATAGDCV 272
P+ DIV+F+ P P L +IKR V GD V
Sbjct: 126 PKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKV 156
Score = 36.2 bits (82), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 267 TAGDCVEVHGGKLLVNGVAQDE-DFILEPLAYEMDPVVVPEGYVFVLGDNRNNSFDSHNW 325
T GD ++L +AQD+ + ++ +VP G F++GDNR+NS DS W
Sbjct: 230 TLGDVTH----RILTVPIAQDQVGMYYQQPGQQLATWIVPPGQYFMMGDNRDNSADSRYW 285
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L E+D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-ELDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D NN DS +
Sbjct: 131 VVLNDQDNNKHDSRQF 146
>sp|A8GM78|LEP_RICAH Signal peptidase I OS=Rickettsia akari (strain Hartford) GN=lepB
PE=3 SV=1
Length = 266
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 72/189 (38%), Gaps = 63/189 (33%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN-------- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 283 -GVAQDEDFI------------LEPLAYEMDPV---------------VVPEGYVFVLGD 314
G ED I +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYTSEDGIKYLKFKETLPNGRTYFSYKLAPIFSVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH 323
NR+ S DS
Sbjct: 197 NRDQSNDSR 205
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 60/136 (44%), Gaps = 20/136 (14%)
Query: 199 KSFLAEPRSIPSASMNPTLDVGDRILAEKVSYFFKRPEVSDIVIFRAPPILQEIGFSSGD 258
++F+ IP+ M+PTL+ GDR++ K+ F + DI+ +R +
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYR----------RGNE 71
Query: 259 VFIKRIVATAGDCVEVHGGKLLVNGVAQD---------EDFILEPLAYEMDPVVVPEGYV 309
++ RI+A G + G+L + D +DF L ++D ++P
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFK-KLDGDIIPPNNF 130
Query: 310 FVLGDNRNNSFDSHNW 325
VL D+ NN DS +
Sbjct: 131 VVLNDHDNNQHDSRQF 146
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 76/194 (39%), Gaps = 64/194 (32%)
Query: 187 AAFT-ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY--------------- 230
A+FT + ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 17 ASFTFVICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPL 76
Query: 231 -----FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN--- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 77 FKGRVFAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKK 129
Query: 283 ------GVAQDEDFI------------LEPLAYEMDPV---------------VVPEGYV 309
G ED I +Y++ P+ VPEG
Sbjct: 130 IERTEVGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGIISNDRYSNTGVFYVPEGQY 189
Query: 310 FVLGDNRNNSFDSH 323
F LGDNR+ S DS
Sbjct: 190 FFLGDNRDRSNDSR 203
>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
PE=3 SV=1
Length = 289
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 63/199 (31%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 37 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 96
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLL 280
F + PE DI+IFR P +IKR++ GD V++ +
Sbjct: 97 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQLIDDVIY 149
Query: 281 VN---------GVAQDED-----FILEPL-------AYEMDPVV---------------V 304
+N G+ E+ E L +Y++ PV+ V
Sbjct: 150 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 209
Query: 305 PEGYVFVLGDNRNNSFDSH 323
PEG F LGDNR+ S DS
Sbjct: 210 PEGEYFFLGDNRDQSNDSR 228
>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
PE=3 SV=1
Length = 291
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 76/199 (38%), Gaps = 63/199 (31%)
Query: 181 CSDDAKAAFTALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY---------- 230
+ + K+ + ++ + + + E +P+ SM T+ DRI K SY
Sbjct: 39 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 98
Query: 231 ----------FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLL 280
F + PE DI+IFR P +IKR++ GD V++ +
Sbjct: 99 DFIHLFKGRIFARTPERGDIIIFRPPH-------EMNTRYIKRLIGLPGDKVQLIDDVIY 151
Query: 281 VN---------GVAQDED-----FILEPL-------AYEMDPVV---------------V 304
+N G+ E+ E L +Y++ PV+ V
Sbjct: 152 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 211
Query: 305 PEGYVFVLGDNRNNSFDSH 323
PEG F LGDNR+ S DS
Sbjct: 212 PEGEYFFLGDNRDQSNDSR 230
>sp|Q4UKA7|LEP_RICFE Signal peptidase I OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=lepB PE=3 SV=1
Length = 266
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 63/189 (33%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNG--VAQDE 288
F + PE DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPERGDIVVFRPPNDMNV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIFGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH 323
NR+ S DS
Sbjct: 197 NRDQSNDSR 205
>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
PE=3 SV=2
Length = 266
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 63/189 (33%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNG--VAQDE 288
F + PE DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPERGDIVVFRPPHDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH 323
NR+ S DS
Sbjct: 197 NRDQSNDSR 205
>sp|Q9ZE32|LEP_RICPR Signal peptidase I OS=Rickettsia prowazekii (strain Madrid E)
GN=lepB PE=3 SV=1
Length = 264
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 72/189 (38%), Gaps = 63/189 (33%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ + + + EP ++P+ SM T+ D I + K SY
Sbjct: 22 VICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIHLFKGRV 81
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVN-------- 282
F + PE DIV+FR P + +IKR++ GD +++ + +N
Sbjct: 82 FAREPERGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 134
Query: 283 -GVAQDEDFI------------LEPLAYEMDPV---------------VVPEGYVFVLGD 314
G ED I +Y++ P+ VPEG F LGD
Sbjct: 135 VGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGVIPSDRYSNTDVFYVPEGQYFFLGD 194
Query: 315 NRNNSFDSH 323
NR+ S DS
Sbjct: 195 NRDRSNDSR 203
>sp|A8GQT7|LEP_RICRS Signal peptidase I OS=Rickettsia rickettsii (strain Sheila Smith)
GN=lepB PE=1 SV=1
Length = 266
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 63/189 (33%)
Query: 191 ALTVSFLFKSFLAEPRSIPSASMNPTLDVGDRILAEKVSY-------------------- 230
+ ++ L + + EP ++P+ SM T+ D I + K SY
Sbjct: 24 VICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRI 83
Query: 231 FFKRPEVSDIVIFRAPPILQEIGFSSGDVFIKRIVATAGDCVEVHGGKLLVNG--VAQDE 288
F + P+ DIV+FR P + +IKR++ GD +++ + +N + + E
Sbjct: 84 FAREPDRGDIVVFRPPNDMSV-------RYIKRLIGLPGDKIQLIDDVIYINDKKIERTE 136
Query: 289 --DFILEP-----------------LAYEMDPV---------------VVPEGYVFVLGD 314
+I E +Y++ P+ VPEG F LGD
Sbjct: 137 VGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYFFLGD 196
Query: 315 NRNNSFDSH 323
NR+ S DS
Sbjct: 197 NRDQSNDSR 205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 124,838,604
Number of Sequences: 539616
Number of extensions: 5210534
Number of successful extensions: 10947
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 10813
Number of HSP's gapped (non-prelim): 84
length of query: 325
length of database: 191,569,459
effective HSP length: 118
effective length of query: 207
effective length of database: 127,894,771
effective search space: 26474217597
effective search space used: 26474217597
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)