Query 020532
Match_columns 325
No_of_seqs 188 out of 366
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 04:24:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020532.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020532hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2v8t_A Manganese-containing ps 81.8 0.8 2.7E-05 43.7 3.1 130 152-302 26-192 (302)
2 1o9i_A Pseudocatalase; oxidore 78.4 5.9 0.0002 37.1 7.7 125 152-301 25-184 (266)
3 3k6c_A Uncharacterized protein 60.7 6.4 0.00022 31.9 3.2 36 244-300 30-65 (95)
4 2hz8_A De novo designed DIIRON 56.7 7.2 0.00025 32.6 3.0 32 278-312 57-88 (115)
5 2oh3_A Rubrerythrin, COG1633: 47.1 21 0.0007 29.5 4.4 103 183-307 39-147 (167)
6 4am5_A Bacterioferritin; metal 46.6 54 0.0018 26.7 6.8 117 148-301 12-133 (159)
7 2fzf_A Hypothetical protein; s 46.3 18 0.00062 30.0 3.9 97 181-305 49-157 (175)
8 1zpy_A Hypothetical protein NE 46.2 17 0.00059 29.3 3.6 37 244-301 30-66 (95)
9 1vjx_A Putative ferritin-like 43.5 24 0.00084 28.9 4.3 99 181-301 42-148 (157)
10 2fzf_A Hypothetical protein; s 40.1 39 0.0013 27.9 5.0 44 241-305 29-72 (175)
11 2oh3_A Rubrerythrin, COG1633: 34.8 35 0.0012 28.1 3.9 50 238-305 11-60 (167)
12 1vjx_A Putative ferritin-like 34.4 40 0.0014 27.6 4.2 40 241-302 23-62 (157)
13 1jm0_A Protein (four-helix bun 29.6 39 0.0013 23.8 2.8 34 242-300 9-42 (50)
14 4etr_A Putative uncharacterize 21.9 66 0.0023 26.5 3.4 47 240-307 104-150 (153)
15 2e0z_A Virus-like particle; ba 20.6 21 0.00072 34.3 0.0 44 237-301 24-67 (345)
No 1
>2v8t_A Manganese-containing pseudocatalase; manganese catalase, oxidoreductase; 0.98A {Thermus thermophilus} PDB: 2v8u_A 2cwl_A
Probab=81.78 E-value=0.8 Score=43.69 Aligned_cols=130 Identities=13% Similarity=0.066 Sum_probs=79.2
Q ss_pred eeeecccCChhHHHHHHHHHhhhccccCcc--hHHHHHHHH-HHHHHHHHHHHHhh-------CcchHH-----------
Q 020532 152 MLETVAAVPGMVGGMLLHLKSLRKFQHSGG--WIKALLEEA-ENERMHLMTMVELV-------KPKWYE----------- 210 (325)
Q Consensus 152 ~LETVA~VPGmv~gml~HLrSLR~mkrd~g--wI~tlLeEA-eNERmHLltf~el~-------kP~~~~----------- 210 (325)
++|-++|.=|=..++++.|.--..++..+. -++.||... --|..|+-++-++- .|...+
T Consensus 26 L~eq~GG~~GElsAamqYl~Qs~~~~~~~~~~~~~dLL~dIatEEL~HlEmvat~I~~L~~Ga~~~~~~~~~~~~~~p~~ 105 (302)
T 2v8t_A 26 VQALLGGRFGEMSTLMNYMYQSFNFRGKKALKPYYDLIANIATEELGHIELVAATINSLLAKNPGKDLEEGVDPASTPLG 105 (302)
T ss_dssp HTHHHHSTTSHHHHHHHHHHHHHHCSCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSTTCCCCCCCCGGGCTTG
T ss_pred HHHHhCCCccHHHHHHHHHHHHccCCCCcchHHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCChhhhhcccccccchHH
Confidence 678888887777777788877667775532 467776554 78888877655432 121111
Q ss_pred --------HHHHHHH--------HHHHHHHHHHHHHhchhhHhhhhhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHH
Q 020532 211 --------RMLVLTV--------QGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAID 274 (325)
Q Consensus 211 --------R~lv~~a--------Qgvf~n~~f~~YliSPr~aHRfvGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~ 274 (325)
+.++... +|+.|+.-.+.|-=.+...-+-+=-.|..|+.+|.+.++.++
T Consensus 106 ~a~~~~~~~~~i~~g~g~~p~ds~G~pWta~Yv~~~Gdl~aDL~~NiaAE~~Ar~~Y~rL~~~td--------------- 170 (302)
T 2v8t_A 106 FAKDVRNAAHFIAGGANSLVMGAMGEHWNGEYVFTSGNLILDLLHNFFLEVAARTHKLRVYEMTD--------------- 170 (302)
T ss_dssp GGGGSSCSHHHHTSSSCCCSBCTTSCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC---------------
T ss_pred HhhhcCCcHHHhhcCCCCCccCCCCCCCCcchhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC---------------
Confidence 0111100 111111111111112334444455569999999999999874
Q ss_pred hhCCCCCCCHHHHHHHHHhhhhHhHhhh
Q 020532 275 YWRLPKDATLKDVITVIRADEAHHRDVN 302 (325)
Q Consensus 275 YW~LP~~atLrDvi~~IRaDEa~HrdvN 302 (325)
|-..+|+|..|+.||..|...=
T Consensus 171 ------Dp~vkd~L~fLi~RE~~H~~~f 192 (302)
T 2v8t_A 171 ------NPVAREMIGYLLVRGGVHAAAY 192 (302)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------ChhHHHHHHHHHHHHHHHHHHH
Confidence 5689999999999999997653
No 2
>1o9i_A Pseudocatalase; oxidoreductase, hexamer, dimanganese catalase, metalloenzyme, preoxidase; HET: MES; 1.33A {Lactobacillus plantarum} SCOP: a.25.1.3 PDB: 1jkv_A 1jku_A
Probab=78.37 E-value=5.9 Score=37.05 Aligned_cols=125 Identities=20% Similarity=0.194 Sum_probs=77.1
Q ss_pred eeeecccCChhHHHHHHHHHhhhccccCcchH-HHHHH-HHHHHHHHHHHHHHhh----C--cchHHHHH-----HHHHH
Q 020532 152 MLETVAAVPGMVGGMLLHLKSLRKFQHSGGWI-KALLE-EAENERMHLMTMVELV----K--PKWYERML-----VLTVQ 218 (325)
Q Consensus 152 ~LETVA~VPGmv~gml~HLrSLR~mkrd~gwI-~tlLe-EAeNERmHLltf~el~----k--P~~~~R~l-----v~~aQ 218 (325)
++|-++|.=|=..++++.|.--..++.. -+ +.||. =+--|..|+-++-++- + |.-..... .....
T Consensus 25 L~e~~GG~~GElsAamqYl~Q~~~~~~~--~~y~dLL~dIatEEl~HlEmva~~I~~L~~ga~~~~~~a~~~p~~~~~~~ 102 (266)
T 1o9i_A 25 LQESLGGQWGETTGMMSFLSQGWASTGA--EKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATTMA 102 (266)
T ss_dssp HHHHHHSTTSHHHHHHHHHHHHHHCCSC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHCTTHHHHHH
T ss_pred HHHHhCCCccHHHHHHHHHHHHhcCCCc--HHHHHHHHHHHHHhccHHHHHHHHHHHHcCCCCcchhhcccchhhHhhhc
Confidence 6777787777777777888776667653 34 66655 4488888987655532 1 21122210 00000
Q ss_pred HHHHHH-HHH------------------HHHhc---hhhHhhhhhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhh
Q 020532 219 GVFFNA-FFV------------------LYLLS---PKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYW 276 (325)
Q Consensus 219 gvf~n~-~f~------------------~YliS---Pr~aHRfvGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW 276 (325)
+ .|. +++ .|+.+ +...-+-+=-.|..|+.+|.+.++.++
T Consensus 103 g--~n~~~~~~~g~g~~p~ds~G~pWt~~yv~~~Gdl~aDL~~niaaE~~Ar~~Y~rl~~~td----------------- 163 (266)
T 1o9i_A 103 G--MDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESEARLQVSRLYSMTE----------------- 163 (266)
T ss_dssp H--SCHHHHHTTSSCCCSBCTTCCBCBGGGCCCCSCHHHHHHHHHHHHHHHHHHHHHHHTTCC-----------------
T ss_pred C--CChHHHHhcCCCCCccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHhcC-----------------
Confidence 0 010 111 13222 334444444568899999999999874
Q ss_pred CCCCCCCHHHHHHHHHhhhhHhHhh
Q 020532 277 RLPKDATLKDVITVIRADEAHHRDV 301 (325)
Q Consensus 277 ~LP~~atLrDvi~~IRaDEa~Hrdv 301 (325)
|-..+|+|..|+.||..|...
T Consensus 164 ----Dp~vkd~L~fLi~RE~~H~~~ 184 (266)
T 1o9i_A 164 ----DEGVRDMLKFLLARETQHQLQ 184 (266)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHH
T ss_pred ----ChhHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999765
No 3
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=60.67 E-value=6.4 Score=31.94 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=30.6
Q ss_pred hhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHh
Q 020532 244 EEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRD 300 (325)
Q Consensus 244 EEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrd 300 (325)
|=|||.-|.+.+...+ |.-++.|+.-||.||-.|..
T Consensus 30 EleAI~~Y~q~a~~~~---------------------d~~~k~vl~~i~~EEkeH~g 65 (95)
T 3k6c_A 30 ELEAVDLYNQRVNACK---------------------DKELKAILAHNRDEEKEHAA 65 (95)
T ss_dssp HHHHHHHHHHHHHHCC---------------------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCC---------------------CHHHHHHHHHHHHHHHHHHH
Confidence 5589999999988864 56789999999999999964
No 4
>2hz8_A De novo designed DIIRON protein; four-helix bundle, de novo protein; NMR {Escherichia coli} PDB: 2lfd_A 2lff_A
Probab=56.67 E-value=7.2 Score=32.57 Aligned_cols=32 Identities=25% Similarity=0.339 Sum_probs=23.0
Q ss_pred CCCCCCHHHHHHHHHhhhhHhHhhhhhcccccccC
Q 020532 278 LPKDATLKDVITVIRADEAHHRDVNHFASDIQFQG 312 (325)
Q Consensus 278 LP~~atLrDvi~~IRaDEa~HrdvNH~~ad~~~~~ 312 (325)
+-++.--+++|.-||.||..| ++.|..+...|
T Consensus 57 ~AP~ee~k~iI~eIr~DE~rH---~~~F~~lY~TG 88 (115)
T 2hz8_A 57 KARNPEKRQVIDKILEDEEKH---IEWLKAASKQG 88 (115)
T ss_dssp SCCCTTTTTTHHHHHHHHHHH---HHHHHHHHHSS
T ss_pred cCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHhC
Confidence 345667789999999999999 44455554434
No 5
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=47.10 E-value=21 Score=29.53 Aligned_cols=103 Identities=17% Similarity=0.096 Sum_probs=67.9
Q ss_pred HHH-HHHHHHHHHHHHHHHHHhhC----cchHHHHHHH-HHHHHHHHHHHHHHHhchhhHhhhhhchhhhHHHHHHHHHH
Q 020532 183 IKA-LLEEAENERMHLMTMVELVK----PKWYERMLVL-TVQGVFFNAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLK 256 (325)
Q Consensus 183 I~t-lLeEAeNERmHLltf~el~k----P~~~~R~lv~-~aQgvf~n~~f~~YliSPr~aHRfvGyLEEEAV~TYT~~L~ 256 (325)
++. +..-|.-|+.|..++.++.. |+. .+.-+. .......-...+-.+.++..+.++.--.|.+|+..|++..+
T Consensus 39 ~k~~f~~LA~eE~~H~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~E~~a~~fY~~~a~ 117 (167)
T 2oh3_A 39 TATVFRDMARFSTLHGDEIKQRSRALELPKL-MSWQYRWKTPPEVGDENDIHYLMTPYHALRYARDNEIRGMEYYKEAAA 117 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSCCCCC-CGGGTSCCCCCCSSCC---CGGGSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-ccccccCCCcHhhhhHhhccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544 45689999999999999852 321 000000 00000000012335667888999999999999999999977
Q ss_pred hhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhhhhccc
Q 020532 257 DIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASD 307 (325)
Q Consensus 257 did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvNH~~ad 307 (325)
.. +|...++++..|-.||..|.+.=...-+
T Consensus 118 ~~---------------------~d~~~k~~~~~la~eE~~H~~~l~~~~~ 147 (167)
T 2oh3_A 118 NS---------------------ADPEVKRLGADFAAEEAEHVVALDKWIE 147 (167)
T ss_dssp HC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HC---------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 75 3567899999999999999887554433
No 6
>4am5_A Bacterioferritin; metal binding protein, ferroxidase centre, iron storage, DI centre, iron channel, heme binding; HET: HEM; 1.58A {Blastochloris viridis} PDB: 4am2_A* 4am4_A*
Probab=46.58 E-value=54 Score=26.73 Aligned_cols=117 Identities=21% Similarity=0.057 Sum_probs=70.0
Q ss_pred ceeeeeeecccCChhHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHHHhh-----CcchHHHHHHHHHHHHHH
Q 020532 148 CRAMMLETVAAVPGMVGGMLLHLKSLRKFQHSGGWIKALLEEAENERMHLMTMVELV-----KPKWYERMLVLTVQGVFF 222 (325)
Q Consensus 148 ~R~i~LETVA~VPGmv~gml~HLrSLR~mkrd~gwI~tlLeEAeNERmHLltf~el~-----kP~~~~R~lv~~aQgvf~ 222 (325)
++.+-.|..|..=|+..+... . -+.-.|.-+-+.++|.+|+.|...|.+.- .|..-..--
T Consensus 12 N~~l~~El~A~~~Y~~~a~~~--~----~~g~~~~a~~f~~~a~eE~~HA~~l~~~i~~lGG~p~~~~~~~--------- 76 (159)
T 4am5_A 12 NRGLRSELTAVSQYWLHYRML--E----DWGYKDLAKKWRAESIEEMAHADKFVERILFLEGLPNLQTLDP--------- 76 (159)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--H----HHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBCCC---------
T ss_pred HHHHHHHHHHHHHHHHHHHHH--h----cCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCccccccc---------
Confidence 445555666666665544322 1 01112445557789999999998877632 332110000
Q ss_pred HHHHHHHHhchhhHhhhhhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhh
Q 020532 223 NAFFVLYLLSPKLAHRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDV 301 (325)
Q Consensus 223 n~~f~~YliSPr~aHRfvGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrdv 301 (325)
.-..=++.-+....=-.|.+++..|.++++.-++ -.|...+|++..|-.||.+|.+-
T Consensus 77 ----~~~~~~~~e~l~~~l~~E~~~~~~~~~~~~~a~~------------------~~D~~t~~~l~~il~eEeeH~~~ 133 (159)
T 4am5_A 77 ----LRIGQTVKEVLESDLAAEREARALYQEGAAYAAS------------------VGDFPSKNLFEELMGDEEHHIDF 133 (159)
T ss_dssp ----CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------CCCHHHHHHHHHHHHHHHHHHHH
Confidence 0000134444455555688899999988876531 24567889999999999999754
No 7
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=46.30 E-value=18 Score=29.96 Aligned_cols=97 Identities=14% Similarity=0.015 Sum_probs=62.4
Q ss_pred chHHH-HHHHHHHHHHHHHHHHHhhC------cchHHHHHHHHHHHHHHHHHH-----HHHHhchhhHhhhhhchhhhHH
Q 020532 181 GWIKA-LLEEAENERMHLMTMVELVK------PKWYERMLVLTVQGVFFNAFF-----VLYLLSPKLAHRVVGYLEEEAI 248 (325)
Q Consensus 181 gwI~t-lLeEAeNERmHLltf~el~k------P~~~~R~lv~~aQgvf~n~~f-----~~YliSPr~aHRfvGyLEEEAV 248 (325)
.-++. +.+-|+.|+.|.-.|.++.+ |..-.+ .-+|. .+. +....++..+-+..--.|.+|+
T Consensus 49 ~~~~~~f~~lA~~E~~H~~~l~~~~~~l~g~~~~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~L~~ai~~E~~a~ 121 (175)
T 2fzf_A 49 EALKEKINWLAEEEKKHEALLRKLYSQMFPGKEVVFPK------EHIGP-ELQPVARELEKVQDIIDLIRWAMKAEEIAA 121 (175)
T ss_dssp TTHHHHHHHHHHHTHHHHHHHHHHHHHHSTTCCCCCCS------CCBSC-CCCCCCSCCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchh------hhhhh-hhhhhHHhccccCCHHHHHHHHHHHHHHHH
Confidence 34555 45689999999998888631 100000 00000 000 0122345667777788899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhhhhc
Q 020532 249 HSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFA 305 (325)
Q Consensus 249 ~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvNH~~ 305 (325)
..|.++.+..+ |...++++..|-.||..|.+.=-.+
T Consensus 122 ~~Y~~~a~~~~---------------------d~~~r~l~~~ia~eE~~H~~~l~~~ 157 (175)
T 2fzf_A 122 EFYLKLEEMVK---------------------EEEKKRLMRYLADMERGHYYTLRAE 157 (175)
T ss_dssp HHHHHHHHTSC---------------------SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCC---------------------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998852 3567899999999999998754433
No 8
>1zpy_A Hypothetical protein NE0167; structural genomics, MCSG, PSI, protein structure initiative; 2.20A {Nitrosomonas europaea atcc 19718} PDB: 3k6c_A
Probab=46.20 E-value=17 Score=29.34 Aligned_cols=37 Identities=30% Similarity=0.460 Sum_probs=29.8
Q ss_pred hhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhh
Q 020532 244 EEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDV 301 (325)
Q Consensus 244 EEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrdv 301 (325)
|-+||.-|.+..... +|.-+++|+.-||.+|..|..-
T Consensus 30 EleAI~~Y~q~A~~t---------------------~D~evk~vl~~iadEEkeH~g~ 66 (95)
T 1zpy_A 30 ELEAVDLYNQRVNAC---------------------KDKELKAILAHNRDEEKEHAAM 66 (95)
T ss_dssp HHHHHHHHHHHHHHC---------------------CCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC---------------------CCHHHHHHHHHHHHHHHHHHHH
Confidence 557888888877774 4677899999999999999643
No 9
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=43.54 E-value=24 Score=28.91 Aligned_cols=99 Identities=22% Similarity=0.235 Sum_probs=62.7
Q ss_pred chHHHH-HHHHHHHHHHHHHHHHhhCcc-hHHHHHHH---HHH-HHHHH--HHHHHHHhchhhHhhhhhchhhhHHHHHH
Q 020532 181 GWIKAL-LEEAENERMHLMTMVELVKPK-WYERMLVL---TVQ-GVFFN--AFFVLYLLSPKLAHRVVGYLEEEAIHSYT 252 (325)
Q Consensus 181 gwI~tl-LeEAeNERmHLltf~el~kP~-~~~R~lv~---~aQ-gvf~n--~~f~~YliSPr~aHRfvGyLEEEAV~TYT 252 (325)
.-++.+ ..=|+-|..|..+|.++..-. |-.. ... ... .+|.. ..-..+..++..+.++.--.|.+|+..|.
T Consensus 42 ~~~k~lF~~LA~eE~~H~~~l~~l~~~~~~~~~-~~~l~~~~~~~~f~~~~~~~~~~~~~~~~~l~~ai~~E~~a~~~Y~ 120 (157)
T 1vjx_A 42 GEIKKTFLELADQERIHAEIFRKMSDQENWDEV-DSYLAGYAFYEVFPDTSEILRRKDLTLKEVLDIAISVEKDSIILYY 120 (157)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHH-TCBCCSBCCCCCCCCCTTGGGCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccCcchhH-HHHHHhhhhhhccchhhhhhcccccCHHHHHHHHHHHHHHHHHHHH
Confidence 445554 457899999999999985211 1000 000 000 00000 00000223467788888889999999999
Q ss_pred HHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhh
Q 020532 253 EYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDV 301 (325)
Q Consensus 253 ~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrdv 301 (325)
+..+.++ |...+.++..|-.||..|...
T Consensus 121 ~~a~~~~---------------------d~~~k~l~~~la~eE~~H~~~ 148 (157)
T 1vjx_A 121 ELKDGLV---------------------NSDAQKTVKKIIDQEKEHLRK 148 (157)
T ss_dssp HHHHHCC---------------------SHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCC---------------------CHHHHHHHHHHHHHHHHHHHH
Confidence 9999873 457889999999999999753
No 10
>2fzf_A Hypothetical protein; structural genomics, southeast collaboratory for structural genomics, secsg, protein structure initiative, PSI; 2.70A {Pyrococcus furiosus} SCOP: a.25.1.1
Probab=40.09 E-value=39 Score=27.90 Aligned_cols=44 Identities=20% Similarity=0.151 Sum_probs=35.5
Q ss_pred hchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhhhhc
Q 020532 241 GYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFA 305 (325)
Q Consensus 241 GyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvNH~~ 305 (325)
--.|.+|+..|+.+.+... +..++++|..+-.||..|.+.=..+
T Consensus 29 ~~~E~~a~~~Y~~~A~~~~---------------------~~~~~~~f~~lA~~E~~H~~~l~~~ 72 (175)
T 2fzf_A 29 IKAEIGAREFYKSLAEKIK---------------------IEALKEKINWLAEEEKKHEALLRKL 72 (175)
T ss_dssp HHHHHHHHHHHHHHHHSCC---------------------CTTHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC---------------------CHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999888752 3578999999999999999875444
No 11
>2oh3_A Rubrerythrin, COG1633: uncharacterized conserved protein; ZP_00055496.1, COG1633: uncharacterized conSer protein; HET: MSE PGE; 2.00A {Magnetospirillum magnetotacticum} SCOP: a.25.1.8
Probab=34.75 E-value=35 Score=28.08 Aligned_cols=50 Identities=18% Similarity=0.094 Sum_probs=36.4
Q ss_pred hhhhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhhhhc
Q 020532 238 RVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFA 305 (325)
Q Consensus 238 RfvGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvNH~~ 305 (325)
...--.|++|...|..+-+..+ .-.+..++++|..+..||..|++.=-.+
T Consensus 11 ~~Ai~~E~~~~~~Y~~lA~~~~------------------~~~~~~~k~~f~~LA~eE~~H~~~l~~~ 60 (167)
T 2oh3_A 11 AHAIALETEAAERYVELADMME------------------AHNNLDTATVFRDMARFSTLHGDEIKQR 60 (167)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH------------------HTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH------------------hCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334579999999999888321 0123468999999999999999874433
No 12
>1vjx_A Putative ferritin-like DIIRON-carboxylate protein; structural genomics, joint center for structural genomics, J protein structure initiative; 2.30A {Thermotoga maritima} SCOP: a.25.1.1
Probab=34.44 E-value=40 Score=27.57 Aligned_cols=40 Identities=23% Similarity=0.221 Sum_probs=32.7
Q ss_pred hchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhh
Q 020532 241 GYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVN 302 (325)
Q Consensus 241 GyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvN 302 (325)
--.|++++..|..+.+ .. +..++++|..|..||..|++.=
T Consensus 23 i~~E~~~~~~Y~~lA~-~~---------------------~~~~k~lF~~LA~eE~~H~~~l 62 (157)
T 1vjx_A 23 IRLEEEGERFYRELSE-HF---------------------NGEIKKTFLELADQERIHAEIF 62 (157)
T ss_dssp HHHHHHHHHHHHHHTT-SC---------------------CSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-cC---------------------CHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999998776 42 4568899999999999999873
No 13
>1jm0_A Protein (four-helix bundle model); alpha-helical bundle, protein design, de novo protein; 1.70A {Synthetic} SCOP: k.8.1.1 PDB: 1jmb_A 1ovu_A 1ovv_A 1lt1_A 1ec5_A 1nvo_A 1ovr_A 2kik_A 1u7j_A 1y47_A 1mft_A 1u7m_A
Probab=29.57 E-value=39 Score=23.78 Aligned_cols=34 Identities=35% Similarity=0.395 Sum_probs=27.9
Q ss_pred chhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHh
Q 020532 242 YLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRD 300 (325)
Q Consensus 242 yLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrd 300 (325)
-+|.+|+..|.+.++- .=||+|..|-.||-+|-+
T Consensus 9 ~~E~~~i~~l~eai~~-------------------------vsr~lle~iL~dEEeH~d 42 (50)
T 1jm0_A 9 KLELQAIKQYREALEY-------------------------VKLPVLAKILEDEEKHIE 42 (50)
T ss_dssp HHHHHHHHHHHHHHHH-------------------------HCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH-------------------------HHHHHHHHHHHHHHHHHH
Confidence 3688899988887766 346999999999999965
No 14
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=21.92 E-value=66 Score=26.51 Aligned_cols=47 Identities=23% Similarity=0.191 Sum_probs=36.3
Q ss_pred hhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhhhhhccc
Q 020532 240 VGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDVNHFASD 307 (325)
Q Consensus 240 vGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~HrdvNH~~ad 307 (325)
+..-|+.|+..|.+.|++ +-+.+.+.+|..+++++-.|.+--+.+-|
T Consensus 104 ~~~gE~~~~~~Y~~al~~---------------------~lp~~~r~ll~~q~~~~~~~~d~~~~Lr~ 150 (153)
T 4etr_A 104 CERGEDVAKHRYQAALEK---------------------SLPAEIHQVIERQYQGVLRHHDRVRALRD 150 (153)
T ss_dssp HHHHHHHHHHHHHHHHHS---------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc---------------------cCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 334478999999999984 12246789999999999999987766543
No 15
>2e0z_A Virus-like particle; bacteriophage, HK97; 3.60A {Pyrococcus furiosus}
Probab=20.57 E-value=21 Score=34.31 Aligned_cols=44 Identities=18% Similarity=0.283 Sum_probs=0.0
Q ss_pred hhhhhchhhhHHHHHHHHHHhhcCCCCCCCCCCHHHHHhhCCCCCCCHHHHHHHHHhhhhHhHhh
Q 020532 237 HRVVGYLEEEAIHSYTEYLKDIDSGSIENVPAPAIAIDYWRLPKDATLKDVITVIRADEAHHRDV 301 (325)
Q Consensus 237 HRfvGyLEEEAV~TYT~~L~did~G~l~n~pAP~iAi~YW~LP~~atLrDvi~~IRaDEa~Hrdv 301 (325)
.|+.=-.|.+|+.-|.+..+..+ |.-+++++..|+.||..|...
T Consensus 24 ir~ai~~E~eAi~~Y~q~A~~~~---------------------d~~~K~vl~~ia~EEk~H~~~ 67 (345)
T 2e0z_A 24 LRLAIIAELDAINLYEQMARYSE---------------------DENVRKILLDVAREEKAHVGE 67 (345)
T ss_dssp -----------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHhCC---------------------CHHHHHHHHHHHHHHHHHHHH
Confidence 33344457788888888777764 566789999999999999874
Done!