Query 020533
Match_columns 325
No_of_seqs 288 out of 3379
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 04:25:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020533.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020533hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gwf_A Cyclohexanone monooxyge 100.0 1.7E-42 5.7E-47 329.5 20.0 295 7-323 8-375 (540)
2 4ap3_A Steroid monooxygenase; 100.0 4.1E-42 1.4E-46 327.3 22.0 300 7-323 21-387 (549)
3 3uox_A Otemo; baeyer-villiger 100.0 7.2E-42 2.5E-46 325.4 19.9 297 6-323 8-382 (545)
4 1w4x_A Phenylacetone monooxyge 100.0 1.5E-40 5E-45 317.3 22.0 297 6-323 15-382 (542)
5 2xve_A Flavin-containing monoo 100.0 4.6E-35 1.6E-39 274.2 22.5 203 8-219 3-230 (464)
6 2gv8_A Monooxygenase; FMO, FAD 100.0 2.5E-33 8.6E-38 261.6 22.1 205 7-220 6-247 (447)
7 4a9w_A Monooxygenase; baeyer-v 100.0 6.9E-33 2.3E-37 250.3 21.7 273 7-323 3-276 (357)
8 4b63_A L-ornithine N5 monooxyg 100.0 1.1E-30 3.7E-35 246.6 13.7 201 7-226 39-287 (501)
9 3lzw_A Ferredoxin--NADP reduct 99.9 1E-26 3.6E-31 207.9 15.6 187 1-220 1-188 (332)
10 3fbs_A Oxidoreductase; structu 99.9 7.4E-26 2.5E-30 199.2 17.4 171 8-219 3-173 (297)
11 2zbw_A Thioredoxin reductase; 99.9 1.9E-25 6.4E-30 200.3 18.5 181 7-220 5-186 (335)
12 3f8d_A Thioredoxin reductase ( 99.9 2.2E-25 7.4E-30 198.4 18.4 173 7-219 15-187 (323)
13 3itj_A Thioredoxin reductase 1 99.9 1.1E-25 3.8E-30 201.7 15.3 181 6-220 21-207 (338)
14 3s5w_A L-ornithine 5-monooxyge 99.9 3E-25 1E-29 207.8 18.2 203 7-228 30-270 (463)
15 2q7v_A Thioredoxin reductase; 99.9 7.7E-25 2.6E-29 195.6 18.9 184 1-220 1-186 (325)
16 3d1c_A Flavin-containing putat 99.9 6.2E-25 2.1E-29 199.5 18.4 186 7-221 4-201 (369)
17 3ab1_A Ferredoxin--NADP reduct 99.9 1.4E-24 4.7E-29 196.7 18.3 181 7-219 14-196 (360)
18 2q0l_A TRXR, thioredoxin reduc 99.9 1.3E-24 4.5E-29 192.8 17.0 175 8-220 2-177 (311)
19 3r9u_A Thioredoxin reductase; 99.9 1.9E-24 6.4E-29 191.8 17.1 178 6-220 3-181 (315)
20 4gcm_A TRXR, thioredoxin reduc 99.9 1E-24 3.5E-29 193.7 13.9 183 1-226 2-184 (312)
21 2a87_A TRXR, TR, thioredoxin r 99.9 4.7E-24 1.6E-28 191.4 17.2 176 6-220 13-189 (335)
22 1fl2_A Alkyl hydroperoxide red 99.9 4.5E-24 1.5E-28 189.2 15.6 177 7-220 1-178 (310)
23 1trb_A Thioredoxin reductase; 99.9 7.9E-24 2.7E-28 188.4 16.4 175 7-220 5-179 (320)
24 1vdc_A NTR, NADPH dependent th 99.9 6.4E-24 2.2E-28 190.1 15.4 176 7-220 8-193 (333)
25 3cty_A Thioredoxin reductase; 99.9 1.3E-23 4.5E-28 187.1 15.1 174 7-220 16-189 (319)
26 4a5l_A Thioredoxin reductase; 99.9 9.5E-24 3.2E-28 187.4 13.4 182 7-221 4-187 (314)
27 1hyu_A AHPF, alkyl hydroperoxi 99.9 8.6E-23 2.9E-27 193.6 20.1 178 6-220 211-389 (521)
28 4fk1_A Putative thioredoxin re 99.9 4.5E-23 1.5E-27 182.6 16.3 175 6-219 5-180 (304)
29 1mo9_A ORF3; nucleotide bindin 99.9 1.4E-21 4.9E-26 185.4 17.4 193 5-225 41-252 (523)
30 3ics_A Coenzyme A-disulfide re 99.9 1.7E-22 5.8E-27 194.6 10.8 186 6-229 35-229 (588)
31 3oc4_A Oxidoreductase, pyridin 99.9 3.5E-21 1.2E-25 179.7 18.9 176 8-225 3-185 (452)
32 1xhc_A NADH oxidase /nitrite r 99.9 5.4E-23 1.9E-27 186.7 6.0 168 7-224 8-180 (367)
33 3iwa_A FAD-dependent pyridine 99.9 7.5E-22 2.6E-26 185.2 12.8 185 7-224 3-197 (472)
34 2bc0_A NADH oxidase; flavoprot 99.9 8E-22 2.7E-26 185.8 12.8 178 7-224 35-231 (490)
35 3lxd_A FAD-dependent pyridine 99.9 2.5E-22 8.4E-27 185.5 8.6 170 6-219 8-185 (415)
36 2gqw_A Ferredoxin reductase; f 99.9 1.8E-21 6.1E-26 179.2 14.1 175 1-225 1-183 (408)
37 1onf_A GR, grase, glutathione 99.9 1.3E-21 4.4E-26 184.8 12.8 194 7-230 2-219 (500)
38 3ntd_A FAD-dependent pyridine 99.9 3.6E-22 1.2E-26 191.4 8.4 184 8-230 2-194 (565)
39 1dxl_A Dihydrolipoamide dehydr 99.9 3.5E-21 1.2E-25 180.6 14.6 201 5-230 4-220 (470)
40 3urh_A Dihydrolipoyl dehydroge 99.9 3.7E-22 1.3E-26 188.2 7.6 198 7-229 25-240 (491)
41 3ef6_A Toluene 1,2-dioxygenase 99.9 2E-22 6.9E-27 185.7 5.4 171 8-224 3-180 (410)
42 3kd9_A Coenzyme A disulfide re 99.9 4.6E-21 1.6E-25 178.7 14.7 174 7-225 3-186 (449)
43 3klj_A NAD(FAD)-dependent dehy 99.9 8.1E-23 2.8E-27 186.6 2.0 172 6-225 8-184 (385)
44 2wpf_A Trypanothione reductase 99.8 4.5E-21 1.5E-25 180.8 13.5 200 7-230 7-237 (495)
45 1zmd_A Dihydrolipoyl dehydroge 99.8 4.5E-21 1.5E-25 180.0 13.2 193 6-224 5-215 (474)
46 2hqm_A GR, grase, glutathione 99.8 3.5E-21 1.2E-25 180.9 12.5 202 1-230 5-228 (479)
47 2qae_A Lipoamide, dihydrolipoy 99.8 1E-20 3.5E-25 177.2 15.4 198 7-229 2-216 (468)
48 2v3a_A Rubredoxin reductase; a 99.8 5E-21 1.7E-25 174.9 12.1 172 7-225 4-183 (384)
49 1ojt_A Surface protein; redox- 99.8 5.5E-20 1.9E-24 172.9 17.6 198 7-229 6-227 (482)
50 3fg2_P Putative rubredoxin red 99.8 2.4E-21 8.3E-26 178.2 8.0 167 8-219 2-175 (404)
51 3l8k_A Dihydrolipoyl dehydroge 99.8 7E-21 2.4E-25 178.3 11.3 195 7-233 4-219 (466)
52 1xdi_A RV3303C-LPDA; reductase 99.8 2.2E-20 7.4E-25 176.4 14.7 202 7-230 2-225 (499)
53 2r9z_A Glutathione amide reduc 99.8 1.3E-20 4.5E-25 176.2 13.1 187 6-226 3-205 (463)
54 2eq6_A Pyruvate dehydrogenase 99.8 2.1E-20 7E-25 175.0 14.3 189 7-229 6-211 (464)
55 2yqu_A 2-oxoglutarate dehydrog 99.8 7.1E-21 2.4E-25 177.7 10.9 193 8-230 2-210 (455)
56 1ebd_A E3BD, dihydrolipoamide 99.8 2.5E-20 8.7E-25 174.0 14.4 193 7-228 3-211 (455)
57 1lvl_A Dihydrolipoamide dehydr 99.8 8.8E-20 3E-24 170.4 18.0 191 6-230 4-214 (458)
58 2cdu_A NADPH oxidase; flavoenz 99.8 1.3E-20 4.6E-25 175.7 11.7 179 8-224 1-186 (452)
59 1ges_A Glutathione reductase; 99.8 1.8E-20 6.1E-25 174.7 12.4 188 7-228 4-208 (450)
60 2a8x_A Dihydrolipoyl dehydroge 99.8 2.1E-20 7.3E-25 174.9 13.0 195 7-230 3-214 (464)
61 3qfa_A Thioredoxin reductase 1 99.8 2.8E-21 9.5E-26 183.2 6.2 200 6-232 31-254 (519)
62 1v59_A Dihydrolipoamide dehydr 99.8 5.2E-20 1.8E-24 172.9 14.7 201 7-228 5-224 (478)
63 4eqs_A Coenzyme A disulfide re 99.8 2.3E-21 8E-26 179.9 5.4 185 9-230 2-190 (437)
64 1nhp_A NADH peroxidase; oxidor 99.8 3.2E-20 1.1E-24 173.0 13.0 177 8-224 1-186 (447)
65 3dgh_A TRXR-1, thioredoxin red 99.8 4.5E-20 1.5E-24 173.6 14.0 197 6-230 8-229 (483)
66 3o0h_A Glutathione reductase; 99.8 2.2E-20 7.6E-25 175.7 11.6 189 7-228 26-232 (484)
67 1q1r_A Putidaredoxin reductase 99.8 1.4E-20 4.8E-25 174.4 8.8 174 7-224 4-186 (431)
68 3lad_A Dihydrolipoamide dehydr 99.8 5.1E-20 1.8E-24 172.9 12.6 199 6-230 2-223 (476)
69 1fec_A Trypanothione reductase 99.8 1.2E-19 4.2E-24 170.8 15.0 196 7-228 3-231 (490)
70 4dna_A Probable glutathione re 99.8 2.6E-20 8.9E-25 174.3 10.4 190 7-228 5-211 (463)
71 1zk7_A HGII, reductase, mercur 99.8 1.8E-20 6E-25 175.6 8.6 192 6-224 3-213 (467)
72 3cgb_A Pyridine nucleotide-dis 99.8 6.1E-20 2.1E-24 172.5 12.1 178 7-224 36-223 (480)
73 3dgz_A Thioredoxin reductase 2 99.8 5.8E-21 2E-25 179.8 5.0 200 6-232 5-229 (488)
74 3ic9_A Dihydrolipoamide dehydr 99.8 2.6E-20 8.9E-25 175.4 8.6 195 7-230 8-217 (492)
75 3k30_A Histamine dehydrogenase 99.8 2E-20 7E-25 183.0 7.3 160 6-219 390-558 (690)
76 2vdc_G Glutamate synthase [NAD 99.8 2.8E-20 9.4E-25 173.2 7.8 169 6-228 121-307 (456)
77 3dk9_A Grase, GR, glutathione 99.8 3.1E-19 1.1E-23 167.6 13.4 194 7-232 20-232 (478)
78 1ps9_A 2,4-dienoyl-COA reducta 99.8 2.5E-19 8.4E-24 174.9 12.3 150 6-214 372-522 (671)
79 1o94_A Tmadh, trimethylamine d 99.8 1.4E-19 4.9E-24 177.8 9.0 168 6-219 388-563 (729)
80 2x8g_A Thioredoxin glutathione 99.8 1.1E-18 3.6E-23 168.4 12.4 197 6-231 106-329 (598)
81 1lqt_A FPRA; NADP+ derivative, 99.8 7.8E-20 2.7E-24 170.3 4.3 161 7-220 3-202 (456)
82 3h8l_A NADH oxidase; membrane 99.8 2.1E-19 7.2E-24 165.5 7.1 168 8-219 2-211 (409)
83 1cjc_A Protein (adrenodoxin re 99.8 2.6E-19 8.8E-24 167.0 5.8 164 6-222 5-202 (460)
84 2gag_A Heterotetrameric sarcos 99.8 7.7E-18 2.6E-22 169.9 16.7 178 7-219 128-317 (965)
85 4b1b_A TRXR, thioredoxin reduc 99.8 3E-18 1E-22 162.2 12.2 205 7-236 42-271 (542)
86 3sx6_A Sulfide-quinone reducta 99.7 2.6E-18 9E-23 159.5 8.7 168 7-219 4-197 (437)
87 1m6i_A Programmed cell death p 99.7 1.9E-19 6.5E-24 169.6 0.9 187 5-219 9-217 (493)
88 4g6h_A Rotenone-insensitive NA 99.7 3.7E-18 1.3E-22 160.8 8.0 185 6-228 41-272 (502)
89 1gte_A Dihydropyrimidine dehyd 99.7 6.6E-18 2.3E-22 171.5 6.1 171 7-228 187-375 (1025)
90 1y56_A Hypothetical protein PH 99.6 6.6E-16 2.3E-20 145.4 11.4 153 7-200 108-264 (493)
91 2gqf_A Hypothetical protein HI 99.6 6.6E-15 2.3E-19 134.9 10.4 135 7-152 4-171 (401)
92 3h28_A Sulfide-quinone reducta 99.6 1.6E-16 5.6E-21 147.1 -1.8 163 8-219 3-189 (430)
93 3v76_A Flavoprotein; structura 99.4 6.2E-13 2.1E-17 122.2 11.7 134 6-152 26-190 (417)
94 3vrd_B FCCB subunit, flavocyto 99.4 1.5E-13 5.1E-18 125.9 7.4 116 7-162 2-119 (401)
95 3cgv_A Geranylgeranyl reductas 99.4 1.3E-12 4.3E-17 119.2 12.3 134 7-149 4-162 (397)
96 3fpz_A Thiazole biosynthetic e 99.4 2.4E-14 8.2E-19 127.6 -0.1 150 7-219 65-216 (326)
97 3oz2_A Digeranylgeranylglycero 99.4 2.6E-12 8.9E-17 116.8 12.6 135 7-149 4-162 (397)
98 2ywl_A Thioredoxin reductase r 99.4 1.9E-12 6.6E-17 105.0 10.0 117 8-159 2-118 (180)
99 2qa1_A PGAE, polyketide oxygen 99.4 4.1E-12 1.4E-16 119.6 12.6 137 4-149 8-165 (500)
100 3nix_A Flavoprotein/dehydrogen 99.4 7.3E-12 2.5E-16 115.2 14.0 135 7-149 5-166 (421)
101 3hyw_A Sulfide-quinone reducta 99.3 1.9E-14 6.4E-19 133.2 -4.2 115 8-162 3-119 (430)
102 3fmw_A Oxygenase; mithramycin, 99.3 3.7E-12 1.3E-16 121.7 11.5 134 7-149 49-207 (570)
103 3rp8_A Flavoprotein monooxygen 99.3 2.4E-12 8.4E-17 118.0 9.9 131 6-150 22-182 (407)
104 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 1.2E-12 3.9E-17 117.4 7.2 128 8-147 2-163 (342)
105 1yvv_A Amine oxidase, flavin-c 99.3 4.2E-12 1.4E-16 113.2 10.8 130 7-149 2-162 (336)
106 2qa2_A CABE, polyketide oxygen 99.3 7.1E-12 2.4E-16 118.0 12.4 136 5-149 10-166 (499)
107 2bry_A NEDD9 interacting prote 99.3 1.1E-12 3.7E-17 123.5 6.2 139 6-152 91-233 (497)
108 3e1t_A Halogenase; flavoprotei 99.3 2.1E-11 7.2E-16 115.2 13.8 142 1-150 1-173 (512)
109 3ces_A MNMG, tRNA uridine 5-ca 99.3 5.7E-12 1.9E-16 120.4 9.8 169 6-217 27-221 (651)
110 2dkh_A 3-hydroxybenzoate hydro 99.3 3.2E-11 1.1E-15 116.9 15.2 146 1-150 26-212 (639)
111 3ihg_A RDME; flavoenzyme, anth 99.3 1.4E-11 4.6E-16 117.2 12.3 136 7-149 5-183 (535)
112 2xdo_A TETX2 protein; tetracyc 99.3 1.1E-11 3.6E-16 113.5 10.7 130 7-151 26-184 (398)
113 2cul_A Glucose-inhibited divis 99.3 8.9E-12 3.1E-16 105.4 9.4 132 7-161 3-135 (232)
114 2r0c_A REBC; flavin adenine di 99.3 4.3E-11 1.5E-15 114.0 15.0 134 7-150 26-197 (549)
115 2gmh_A Electron transfer flavo 99.3 3.7E-11 1.3E-15 115.2 14.0 140 7-149 35-217 (584)
116 3alj_A 2-methyl-3-hydroxypyrid 99.2 1.6E-11 5.4E-16 111.6 9.1 126 7-149 11-160 (379)
117 3dje_A Fructosyl amine: oxygen 99.2 3.1E-11 1.1E-15 111.7 11.1 63 79-153 159-225 (438)
118 2i0z_A NAD(FAD)-utilizing dehy 99.2 1.2E-11 4.1E-16 114.9 7.9 134 6-151 25-193 (447)
119 2zxi_A TRNA uridine 5-carboxym 99.2 2.6E-11 9E-16 115.4 10.0 176 6-224 26-228 (637)
120 1y0p_A Fumarate reductase flav 99.2 2.3E-10 7.9E-15 109.5 15.6 137 7-150 126-318 (571)
121 3nlc_A Uncharacterized protein 99.2 1.7E-10 5.7E-15 109.2 13.6 132 7-149 107-277 (549)
122 2vou_A 2,6-dihydroxypyridine h 99.2 1.1E-10 3.6E-15 106.8 11.9 125 7-150 5-154 (397)
123 1k0i_A P-hydroxybenzoate hydro 99.2 2E-11 6.7E-16 111.4 7.0 136 7-151 2-165 (394)
124 1rp0_A ARA6, thiazole biosynth 99.2 1.1E-10 3.8E-15 101.8 11.4 135 7-148 39-190 (284)
125 2x3n_A Probable FAD-dependent 99.2 3.5E-11 1.2E-15 110.0 8.5 132 7-150 6-167 (399)
126 3i3l_A Alkylhalidase CMLS; fla 99.2 1.1E-10 3.9E-15 111.7 12.4 135 7-149 23-188 (591)
127 1qo8_A Flavocytochrome C3 fuma 99.2 2.8E-10 9.5E-15 108.8 14.8 138 6-150 120-313 (566)
128 3c96_A Flavin-containing monoo 99.2 3.5E-10 1.2E-14 103.8 15.0 137 7-150 4-170 (410)
129 3atr_A Conserved archaeal prot 99.2 8E-11 2.7E-15 109.5 10.8 133 7-150 6-163 (453)
130 3ps9_A TRNA 5-methylaminomethy 99.2 1.7E-10 5.9E-15 112.6 13.2 132 7-150 272-474 (676)
131 1pn0_A Phenol 2-monooxygenase; 99.2 3.5E-10 1.2E-14 109.9 15.0 145 1-150 1-231 (665)
132 4hb9_A Similarities with proba 99.2 1.2E-10 4.2E-15 106.4 11.1 129 8-150 2-167 (412)
133 3dme_A Conserved exported prot 99.2 1.3E-10 4.6E-15 104.5 10.9 62 79-149 148-209 (369)
134 2uzz_A N-methyl-L-tryptophan o 99.2 1.6E-10 5.4E-15 104.4 11.3 64 80-156 148-211 (372)
135 1ryi_A Glycine oxidase; flavop 99.1 2.9E-10 9.9E-15 103.1 11.4 61 77-150 160-220 (382)
136 3cp8_A TRNA uridine 5-carboxym 99.1 3E-10 1E-14 108.5 11.2 169 6-217 20-215 (641)
137 3pvc_A TRNA 5-methylaminomethy 99.1 5.9E-10 2E-14 109.0 13.3 60 79-150 410-470 (689)
138 1y56_B Sarcosine oxidase; dehy 99.1 3.8E-10 1.3E-14 102.4 11.0 59 78-149 146-205 (382)
139 3da1_A Glycerol-3-phosphate de 99.1 1.3E-09 4.6E-14 103.8 14.6 65 79-149 168-232 (561)
140 3nyc_A D-arginine dehydrogenas 99.1 1.7E-10 5.9E-15 104.4 7.7 58 79-149 152-209 (381)
141 3jsk_A Cypbp37 protein; octame 99.1 5.3E-10 1.8E-14 99.1 10.3 139 7-149 79-251 (344)
142 4at0_A 3-ketosteroid-delta4-5a 99.1 2.1E-09 7E-14 101.5 14.8 61 82-149 203-264 (510)
143 2gf3_A MSOX, monomeric sarcosi 99.1 6.6E-10 2.3E-14 100.9 10.9 59 79-150 148-206 (389)
144 2qcu_A Aerobic glycerol-3-phos 99.0 3.1E-09 1.1E-13 100.1 14.9 64 79-149 147-210 (501)
145 2oln_A NIKD protein; flavoprot 99.0 6.4E-10 2.2E-14 101.4 9.9 57 80-149 152-208 (397)
146 1d4d_A Flavocytochrome C fumar 99.0 3.3E-09 1.1E-13 101.4 15.0 137 7-150 126-318 (572)
147 2gag_B Heterotetrameric sarcos 99.0 5.9E-10 2E-14 101.8 8.9 60 78-149 171-230 (405)
148 3kkj_A Amine oxidase, flavin-c 99.0 4.1E-10 1.4E-14 96.4 6.7 50 8-57 3-52 (336)
149 3ka7_A Oxidoreductase; structu 99.0 8.6E-10 2.9E-14 101.5 9.1 40 8-47 1-40 (425)
150 3k7m_X 6-hydroxy-L-nicotine ox 99.0 1.3E-09 4.3E-14 100.5 10.1 40 8-47 2-41 (431)
151 2e5v_A L-aspartate oxidase; ar 99.0 6.4E-10 2.2E-14 103.9 7.9 195 9-228 1-250 (472)
152 2e1m_A L-glutamate oxidase; L- 99.0 1.6E-09 5.4E-14 97.7 9.8 109 5-122 42-165 (376)
153 3c4n_A Uncharacterized protein 99.0 3.4E-10 1.2E-14 103.7 5.4 36 7-42 36-73 (405)
154 3i6d_A Protoporphyrinogen oxid 99.0 1.1E-09 3.8E-14 101.9 8.7 39 7-45 5-49 (470)
155 3nrn_A Uncharacterized protein 99.0 8.6E-10 2.9E-14 101.5 7.9 41 8-48 1-41 (421)
156 2aqj_A Tryptophan halogenase, 98.9 8.1E-10 2.8E-14 105.0 6.8 62 78-150 162-223 (538)
157 2gjc_A Thiazole biosynthetic e 98.9 2.4E-09 8.4E-14 94.3 9.2 104 7-113 65-177 (326)
158 2wdq_A Succinate dehydrogenase 98.9 9.8E-09 3.3E-13 98.4 13.9 145 1-150 1-207 (588)
159 4gde_A UDP-galactopyranose mut 98.9 2.4E-09 8.2E-14 100.8 7.6 58 1-58 4-63 (513)
160 2pyx_A Tryptophan halogenase; 98.9 5E-09 1.7E-13 99.3 9.6 62 78-150 172-234 (526)
161 2e4g_A Tryptophan halogenase; 98.8 1.1E-08 3.7E-13 97.5 10.5 62 78-150 191-253 (550)
162 3nks_A Protoporphyrinogen oxid 98.8 9.7E-09 3.3E-13 95.9 9.5 39 8-46 3-43 (477)
163 2rgh_A Alpha-glycerophosphate 98.8 1.8E-08 6.1E-13 96.3 11.3 65 79-149 186-250 (571)
164 2yqu_A 2-oxoglutarate dehydrog 98.8 2.6E-08 9E-13 92.5 12.1 100 7-153 167-266 (455)
165 2weu_A Tryptophan 5-halogenase 98.8 3.2E-09 1.1E-13 100.1 5.8 62 78-150 170-231 (511)
166 1pj5_A N,N-dimethylglycine oxi 98.8 1.1E-08 3.6E-13 102.2 9.7 131 6-149 3-207 (830)
167 1chu_A Protein (L-aspartate ox 98.8 1.4E-08 4.7E-13 96.4 10.0 38 6-44 7-44 (540)
168 1kf6_A Fumarate reductase flav 98.8 7.4E-08 2.5E-12 92.5 13.8 140 7-151 5-199 (602)
169 4gut_A Lysine-specific histone 98.8 5.9E-08 2E-12 95.5 12.7 39 6-44 335-373 (776)
170 3c4a_A Probable tryptophan hyd 98.7 1.8E-09 6E-14 98.1 0.8 119 8-150 1-144 (381)
171 2h88_A Succinate dehydrogenase 98.7 9E-08 3.1E-12 92.0 12.6 138 7-150 18-218 (621)
172 2bs2_A Quinol-fumarate reducta 98.7 2.1E-07 7.2E-12 90.1 14.8 37 6-42 4-40 (660)
173 2v3a_A Rubredoxin reductase; a 98.7 1.1E-07 3.9E-12 86.2 12.2 98 7-148 145-242 (384)
174 3gyx_A Adenylylsulfate reducta 98.7 1.1E-07 3.9E-12 91.9 12.7 36 7-42 22-63 (662)
175 2eq6_A Pyruvate dehydrogenase 98.7 1.3E-07 4.5E-12 88.0 12.6 106 7-154 169-274 (464)
176 1v59_A Dihydrolipoamide dehydr 98.7 1.8E-07 6E-12 87.5 13.5 107 7-153 183-289 (478)
177 2b9w_A Putative aminooxidase; 98.7 2.5E-08 8.6E-13 91.6 7.4 48 1-49 1-49 (424)
178 2bcg_G Secretory pathway GDP d 98.7 1.6E-08 5.3E-13 94.0 6.0 48 1-48 5-52 (453)
179 4dgk_A Phytoene dehydrogenase; 98.7 1.5E-08 5E-13 95.3 5.5 40 8-47 2-41 (501)
180 1ebd_A E3BD, dihydrolipoamide 98.7 1.9E-07 6.5E-12 86.7 12.7 103 7-153 170-272 (455)
181 3axb_A Putative oxidoreductase 98.7 4E-08 1.4E-12 91.0 8.1 34 7-40 23-57 (448)
182 1v0j_A UDP-galactopyranose mut 98.7 1.9E-08 6.4E-13 91.9 5.7 51 1-51 1-52 (399)
183 3s5w_A L-ornithine 5-monooxyge 98.7 2.6E-07 8.8E-12 85.9 13.4 172 7-195 227-418 (463)
184 1nhp_A NADH peroxidase; oxidor 98.7 6.8E-08 2.3E-12 89.5 9.4 102 6-154 148-249 (447)
185 1ges_A Glutathione reductase; 98.6 1.7E-07 5.8E-12 86.9 11.1 101 7-153 167-267 (450)
186 1jnr_A Adenylylsulfate reducta 98.6 4.4E-07 1.5E-11 87.8 14.0 35 7-41 22-60 (643)
187 3urh_A Dihydrolipoyl dehydroge 98.6 5.7E-07 2E-11 84.3 14.2 105 7-153 198-302 (491)
188 2r9z_A Glutathione amide reduc 98.6 2.1E-07 7.3E-12 86.6 11.1 100 7-153 166-266 (463)
189 1sez_A Protoporphyrinogen oxid 98.6 9.2E-08 3.1E-12 89.9 8.6 53 7-59 13-65 (504)
190 1lvl_A Dihydrolipoamide dehydr 98.6 1.6E-07 5.5E-12 87.3 10.0 101 7-154 171-271 (458)
191 1zmd_A Dihydrolipoyl dehydroge 98.6 7.9E-07 2.7E-11 82.9 14.0 107 7-153 178-284 (474)
192 1dxl_A Dihydrolipoamide dehydr 98.5 5.1E-07 1.7E-11 84.1 12.1 101 7-147 177-277 (470)
193 4dsg_A UDP-galactopyranose mut 98.5 9.8E-08 3.4E-12 89.3 7.2 50 6-55 8-59 (484)
194 1zk7_A HGII, reductase, mercur 98.5 4.4E-07 1.5E-11 84.5 11.6 94 7-147 176-269 (467)
195 2a8x_A Dihydrolipoyl dehydroge 98.5 5.6E-07 1.9E-11 83.7 12.0 102 7-153 171-273 (464)
196 3hdq_A UDP-galactopyranose mut 98.5 1E-07 3.5E-12 86.6 6.4 50 6-55 28-78 (397)
197 2qae_A Lipoamide, dihydrolipoy 98.5 7.6E-07 2.6E-11 82.9 12.5 104 7-153 174-278 (468)
198 1rsg_A FMS1 protein; FAD bindi 98.5 4.9E-08 1.7E-12 92.2 4.4 42 7-48 8-50 (516)
199 3ic9_A Dihydrolipoamide dehydr 98.5 1.2E-06 4.1E-11 82.2 13.7 104 7-154 174-277 (492)
200 1s3e_A Amine oxidase [flavin-c 98.5 1.7E-07 5.7E-12 88.6 7.9 42 7-48 4-45 (520)
201 3lxd_A FAD-dependent pyridine 98.5 8.1E-07 2.8E-11 81.4 12.2 98 7-147 152-249 (415)
202 4b1b_A TRXR, thioredoxin reduc 98.5 7.5E-07 2.6E-11 84.2 12.0 101 6-154 222-322 (542)
203 2gqw_A Ferredoxin reductase; f 98.5 8.1E-07 2.8E-11 81.3 12.0 93 7-147 145-237 (408)
204 3cgb_A Pyridine nucleotide-dis 98.5 3.5E-07 1.2E-11 85.5 9.7 96 6-147 185-280 (480)
205 3oc4_A Oxidoreductase, pyridin 98.5 9.6E-07 3.3E-11 81.9 12.5 101 7-154 147-247 (452)
206 1fec_A Trypanothione reductase 98.5 7.3E-07 2.5E-11 83.6 11.6 101 7-153 187-290 (490)
207 1onf_A GR, grase, glutathione 98.5 1.3E-06 4.5E-11 82.1 13.2 102 7-153 176-277 (500)
208 1ojt_A Surface protein; redox- 98.5 3.1E-07 1.1E-11 85.9 8.9 103 7-153 185-288 (482)
209 3lad_A Dihydrolipoamide dehydr 98.5 1.1E-06 3.8E-11 81.9 12.6 103 7-153 180-282 (476)
210 1q1r_A Putidaredoxin reductase 98.5 1.1E-06 3.7E-11 81.1 12.2 99 7-147 149-248 (431)
211 3ef6_A Toluene 1,2-dioxygenase 98.5 3.4E-07 1.2E-11 83.8 8.9 97 7-147 143-239 (410)
212 1mo9_A ORF3; nucleotide bindin 98.5 9.3E-07 3.2E-11 83.5 12.0 97 8-147 215-314 (523)
213 2wpf_A Trypanothione reductase 98.5 9.4E-07 3.2E-11 82.9 11.8 101 7-153 191-294 (495)
214 3dk9_A Grase, GR, glutathione 98.5 1.7E-06 5.9E-11 80.7 13.4 107 7-153 187-295 (478)
215 1xdi_A RV3303C-LPDA; reductase 98.5 9.1E-07 3.1E-11 83.1 11.4 97 7-148 182-278 (499)
216 2hqm_A GR, grase, glutathione 98.5 1E-06 3.4E-11 82.4 11.6 103 7-153 185-287 (479)
217 3dgh_A TRXR-1, thioredoxin red 98.5 4.5E-06 1.5E-10 78.0 16.0 101 7-147 187-287 (483)
218 3fg2_P Putative rubredoxin red 98.5 9.6E-07 3.3E-11 80.6 11.1 98 7-147 142-239 (404)
219 3dgz_A Thioredoxin reductase 2 98.4 3.5E-06 1.2E-10 78.8 15.1 105 7-153 185-289 (488)
220 2yg5_A Putrescine oxidase; oxi 98.4 1.3E-07 4.3E-12 87.7 5.1 41 7-47 5-45 (453)
221 2ivd_A PPO, PPOX, protoporphyr 98.4 1.6E-07 5.5E-12 87.6 5.7 43 6-48 15-57 (478)
222 2jae_A L-amino acid oxidase; o 98.4 1.9E-07 6.6E-12 87.4 6.2 42 5-46 9-50 (489)
223 3iwa_A FAD-dependent pyridine 98.4 1.5E-06 5.3E-11 80.9 12.1 97 7-147 159-256 (472)
224 2cdu_A NADPH oxidase; flavoenz 98.4 1.1E-06 3.7E-11 81.5 10.8 100 7-153 149-249 (452)
225 2bc0_A NADH oxidase; flavoprot 98.4 9.8E-07 3.3E-11 82.7 10.4 101 6-153 193-293 (490)
226 3o0h_A Glutathione reductase; 98.4 1.1E-06 3.7E-11 82.2 10.7 96 7-147 191-286 (484)
227 1trb_A Thioredoxin reductase; 98.4 2.6E-06 8.8E-11 74.8 12.5 100 7-147 145-245 (320)
228 2vvm_A Monoamine oxidase N; FA 98.4 2.4E-07 8.2E-12 86.9 5.7 40 8-47 40-79 (495)
229 3ntd_A FAD-dependent pyridine 98.4 2.2E-06 7.5E-11 81.7 12.3 98 7-147 151-265 (565)
230 2zbw_A Thioredoxin reductase; 98.4 4E-06 1.4E-10 74.2 12.6 99 7-147 152-250 (335)
231 1i8t_A UDP-galactopyranose mut 98.4 2.8E-07 9.4E-12 83.2 5.0 49 8-56 2-50 (367)
232 2iid_A L-amino-acid oxidase; f 98.4 3.5E-07 1.2E-11 85.8 5.7 43 5-47 31-73 (498)
233 4eqs_A Coenzyme A disulfide re 98.4 1.2E-06 4E-11 80.9 9.1 95 7-152 147-241 (437)
234 3qfa_A Thioredoxin reductase 1 98.3 7.6E-06 2.6E-10 77.2 14.8 106 7-153 210-317 (519)
235 2bi7_A UDP-galactopyranose mut 98.3 3.9E-07 1.3E-11 82.7 5.7 44 8-51 4-47 (384)
236 3lov_A Protoporphyrinogen oxid 98.3 3.9E-07 1.3E-11 84.9 5.2 41 7-47 4-46 (475)
237 1b37_A Protein (polyamine oxid 98.3 4.6E-07 1.6E-11 84.5 5.5 49 6-54 3-52 (472)
238 1m6i_A Programmed cell death p 98.3 2.8E-06 9.5E-11 79.7 10.7 97 7-147 180-280 (493)
239 1xhc_A NADH oxidase /nitrite r 98.3 1.2E-06 4E-11 79.0 7.9 92 8-152 144-235 (367)
240 1d5t_A Guanine nucleotide diss 98.3 7.3E-07 2.5E-11 82.2 6.2 43 6-48 5-47 (433)
241 4dna_A Probable glutathione re 98.2 6.1E-06 2.1E-10 76.7 11.4 96 7-147 170-266 (463)
242 3ab1_A Ferredoxin--NADP reduct 98.2 8.8E-06 3E-10 72.8 11.9 98 7-147 163-261 (360)
243 3itj_A Thioredoxin reductase 1 98.2 1.6E-05 5.5E-10 70.1 13.0 96 7-147 173-269 (338)
244 1fl2_A Alkyl hydroperoxide red 98.2 1.5E-05 5.1E-10 69.6 12.5 95 7-147 144-240 (310)
245 3ics_A Coenzyme A-disulfide re 98.2 7.5E-06 2.6E-10 78.4 11.0 94 7-147 187-280 (588)
246 3d1c_A Flavin-containing putat 98.2 5.8E-06 2E-10 74.1 9.6 108 7-153 166-274 (369)
247 3kd9_A Coenzyme A disulfide re 98.2 8E-06 2.7E-10 75.6 10.7 95 7-147 148-242 (449)
248 3lzw_A Ferredoxin--NADP reduct 98.2 2.4E-05 8.2E-10 68.8 13.1 95 7-147 154-248 (332)
249 3p1w_A Rabgdi protein; GDI RAB 98.2 1.5E-06 5.1E-11 80.6 5.3 42 6-47 19-60 (475)
250 3cty_A Thioredoxin reductase; 98.1 2.8E-05 9.7E-10 68.2 13.0 96 7-147 155-250 (319)
251 2q7v_A Thioredoxin reductase; 98.1 9.4E-06 3.2E-10 71.5 9.8 96 7-147 152-247 (325)
252 1c0p_A D-amino acid oxidase; a 98.1 2.6E-06 8.8E-11 76.5 6.1 36 6-41 5-40 (363)
253 3l8k_A Dihydrolipoyl dehydroge 98.1 1.4E-05 4.6E-10 74.4 11.2 104 7-154 172-275 (466)
254 3ihm_A Styrene monooxygenase A 98.1 1.5E-06 5.3E-11 80.0 4.5 34 7-40 22-55 (430)
255 2z3y_A Lysine-specific histone 98.1 2.4E-06 8.3E-11 83.0 6.0 43 6-48 106-148 (662)
256 1vdc_A NTR, NADPH dependent th 98.1 1.8E-05 6.2E-10 69.8 11.1 98 7-147 159-257 (333)
257 2x8g_A Thioredoxin glutathione 98.1 6E-05 2E-09 72.3 15.4 105 7-153 286-397 (598)
258 3f8d_A Thioredoxin reductase ( 98.1 2.3E-05 8E-10 68.5 11.5 96 7-147 154-249 (323)
259 2q0l_A TRXR, thioredoxin reduc 98.1 1.2E-05 4.3E-10 70.2 9.6 97 7-147 143-239 (311)
260 4g6h_A Rotenone-insensitive NA 98.1 8.4E-06 2.9E-10 76.5 9.0 100 8-148 218-331 (502)
261 2a87_A TRXR, TR, thioredoxin r 98.1 1.2E-05 4.1E-10 71.2 9.4 96 7-147 155-250 (335)
262 2xag_A Lysine-specific histone 98.1 3.5E-06 1.2E-10 83.6 6.4 43 6-48 277-319 (852)
263 3klj_A NAD(FAD)-dependent dehy 98.1 2.2E-06 7.4E-11 77.8 4.0 84 7-147 146-229 (385)
264 3pl8_A Pyranose 2-oxidase; sub 98.0 3.5E-06 1.2E-10 81.1 5.2 41 6-46 45-85 (623)
265 3g3e_A D-amino-acid oxidase; F 97.9 4.7E-06 1.6E-10 74.4 3.8 34 8-41 1-40 (351)
266 1hyu_A AHPF, alkyl hydroperoxi 97.9 6.6E-05 2.2E-09 70.8 11.7 95 7-147 355-451 (521)
267 3r9u_A Thioredoxin reductase; 97.9 3.8E-05 1.3E-09 67.0 9.2 96 7-147 147-242 (315)
268 4a5l_A Thioredoxin reductase; 97.9 6.7E-05 2.3E-09 65.5 9.9 101 7-153 152-252 (314)
269 3k30_A Histamine dehydrogenase 97.9 4.1E-05 1.4E-09 74.7 9.3 98 7-147 523-622 (690)
270 3fbs_A Oxidoreductase; structu 97.9 1.9E-05 6.5E-10 68.3 6.3 84 7-147 141-224 (297)
271 3g5s_A Methylenetetrahydrofola 97.8 2.4E-05 8.1E-10 70.2 5.8 36 8-43 2-37 (443)
272 1vg0_A RAB proteins geranylger 97.8 2.4E-05 8.1E-10 74.9 6.1 48 2-49 3-50 (650)
273 2xve_A Flavin-containing monoo 97.7 0.00013 4.5E-09 67.7 9.7 35 7-41 197-231 (464)
274 3ayj_A Pro-enzyme of L-phenyla 97.7 1.2E-05 4.1E-10 77.9 2.4 36 7-42 56-100 (721)
275 4gcm_A TRXR, thioredoxin reduc 97.6 0.00037 1.3E-08 60.8 11.0 35 7-41 145-179 (312)
276 2gag_A Heterotetrameric sarcos 97.6 0.00032 1.1E-08 71.0 11.8 97 7-152 284-384 (965)
277 3gwf_A Cyclohexanone monooxyge 97.6 0.00039 1.4E-08 65.7 10.7 35 7-41 178-212 (540)
278 3t37_A Probable dehydrogenase; 97.5 6.3E-05 2.2E-09 70.9 4.9 36 6-41 16-52 (526)
279 2gv8_A Monooxygenase; FMO, FAD 97.5 0.00025 8.5E-09 65.4 8.8 35 7-41 212-247 (447)
280 1kdg_A CDH, cellobiose dehydro 97.5 7.2E-05 2.5E-09 70.9 5.0 36 6-41 6-41 (546)
281 2vdc_G Glutamate synthase [NAD 97.5 0.0004 1.4E-08 64.2 9.4 36 6-41 263-299 (456)
282 1cjc_A Protein (adrenodoxin re 97.5 0.0013 4.4E-08 60.9 12.8 35 7-41 145-200 (460)
283 1lqt_A FPRA; NADP+ derivative, 97.4 0.00097 3.3E-08 61.7 11.2 36 7-42 147-203 (456)
284 3sx6_A Sulfide-quinone reducta 97.4 0.00027 9.2E-09 65.0 7.3 103 8-147 150-267 (437)
285 4a9w_A Monooxygenase; baeyer-v 97.4 0.00021 7.2E-09 63.2 6.3 33 7-40 163-195 (357)
286 3h28_A Sulfide-quinone reducta 97.4 0.00031 1.1E-08 64.4 7.3 99 8-148 143-255 (430)
287 1ps9_A 2,4-dienoyl-COA reducta 97.3 0.00082 2.8E-08 65.3 10.1 29 7-35 494-522 (671)
288 1ju2_A HydroxynitrIle lyase; f 97.3 0.00011 3.9E-09 69.4 3.6 35 7-42 26-60 (536)
289 1n4w_A CHOD, cholesterol oxida 97.3 0.0002 7E-09 67.1 5.1 38 6-43 4-41 (504)
290 3q9t_A Choline dehydrogenase a 97.3 0.00018 6E-09 68.6 4.7 36 6-41 5-41 (577)
291 2g1u_A Hypothetical protein TM 97.2 0.00035 1.2E-08 54.5 5.2 41 1-41 13-53 (155)
292 1o94_A Tmadh, trimethylamine d 97.2 0.0019 6.5E-08 63.3 10.9 104 7-152 528-647 (729)
293 3qvp_A Glucose oxidase; oxidor 97.2 0.00026 9E-09 67.4 4.5 35 6-40 18-53 (583)
294 3hyw_A Sulfide-quinone reducta 97.1 0.00073 2.5E-08 62.0 7.1 36 187-222 3-40 (430)
295 1coy_A Cholesterol oxidase; ox 97.1 0.00035 1.2E-08 65.6 5.0 36 6-41 10-45 (507)
296 1gte_A Dihydropyrimidine dehyd 97.1 0.0039 1.3E-07 63.5 12.1 34 7-40 332-366 (1025)
297 1gpe_A Protein (glucose oxidas 97.0 0.00061 2.1E-08 65.1 5.1 36 6-41 23-59 (587)
298 3fim_B ARYL-alcohol oxidase; A 97.0 0.00032 1.1E-08 66.6 3.0 36 7-42 2-38 (566)
299 2jbv_A Choline oxidase; alcoho 96.9 0.00067 2.3E-08 64.2 4.4 36 7-42 13-49 (546)
300 3vrd_B FCCB subunit, flavocyto 96.8 0.0022 7.4E-08 58.0 7.3 38 185-222 1-40 (401)
301 3h8l_A NADH oxidase; membrane 96.7 0.0041 1.4E-07 56.4 8.2 52 81-148 218-269 (409)
302 4b63_A L-ornithine N5 monooxyg 96.6 0.023 7.7E-07 53.1 12.7 36 6-41 245-282 (501)
303 3fwz_A Inner membrane protein 96.6 0.0039 1.3E-07 47.5 5.9 34 7-40 7-40 (140)
304 1lss_A TRK system potassium up 96.5 0.0032 1.1E-07 47.5 5.0 34 7-40 4-37 (140)
305 2ywl_A Thioredoxin reductase r 96.5 0.002 6.8E-08 51.2 3.9 32 188-219 3-34 (180)
306 3llv_A Exopolyphosphatase-rela 96.4 0.0047 1.6E-07 46.9 5.3 34 7-40 6-39 (141)
307 3ic5_A Putative saccharopine d 96.4 0.0036 1.2E-07 45.7 4.4 34 7-40 5-39 (118)
308 3ado_A Lambda-crystallin; L-gu 96.3 0.0035 1.2E-07 54.8 4.6 39 1-40 1-39 (319)
309 1id1_A Putative potassium chan 96.2 0.0068 2.3E-07 46.8 5.6 33 8-40 4-36 (153)
310 2hmt_A YUAA protein; RCK, KTN, 96.0 0.0091 3.1E-07 45.2 5.1 33 8-40 7-39 (144)
311 3c85_A Putative glutathione-re 95.9 0.011 3.8E-07 47.0 5.6 34 7-40 39-73 (183)
312 3g0o_A 3-hydroxyisobutyrate de 95.9 0.0077 2.6E-07 52.3 4.9 40 1-40 1-40 (303)
313 3kkj_A Amine oxidase, flavin-c 95.9 0.0044 1.5E-07 51.8 3.2 32 188-219 4-35 (336)
314 2dpo_A L-gulonate 3-dehydrogen 95.8 0.01 3.5E-07 52.0 5.2 39 1-40 1-39 (319)
315 4fk1_A Putative thioredoxin re 95.8 0.055 1.9E-06 46.6 9.9 35 7-41 146-181 (304)
316 3l6d_A Putative oxidoreductase 95.7 0.014 4.8E-07 50.8 5.8 36 5-40 7-42 (306)
317 3l4b_C TRKA K+ channel protien 95.5 0.013 4.5E-07 48.1 4.6 32 9-40 2-33 (218)
318 3lk7_A UDP-N-acetylmuramoylala 95.5 0.014 5E-07 53.6 5.3 35 6-40 8-42 (451)
319 1pzg_A LDH, lactate dehydrogen 95.5 0.017 5.7E-07 50.9 5.4 34 7-40 9-43 (331)
320 4dio_A NAD(P) transhydrogenase 95.4 0.016 5.4E-07 52.2 5.2 35 7-41 190-224 (405)
321 3ktd_A Prephenate dehydrogenas 95.4 0.018 6.2E-07 50.8 5.4 40 1-40 2-41 (341)
322 4dgk_A Phytoene dehydrogenase; 95.3 0.007 2.4E-07 56.3 2.6 33 187-219 2-34 (501)
323 2cul_A Glucose-inhibited divis 95.3 0.01 3.5E-07 49.3 3.4 33 187-219 4-36 (232)
324 4e12_A Diketoreductase; oxidor 95.3 0.02 6.7E-07 49.2 5.2 33 8-40 5-37 (283)
325 2x5o_A UDP-N-acetylmuramoylala 95.3 0.015 5E-07 53.4 4.6 36 7-42 5-40 (439)
326 3dfz_A SIRC, precorrin-2 dehyd 95.2 0.023 7.9E-07 46.9 5.2 35 6-40 30-64 (223)
327 1f0y_A HCDH, L-3-hydroxyacyl-C 95.2 0.021 7.3E-07 49.4 5.3 33 8-40 16-48 (302)
328 3pid_A UDP-glucose 6-dehydroge 95.2 0.018 6.1E-07 52.5 4.9 35 6-41 35-69 (432)
329 3qha_A Putative oxidoreductase 95.2 0.017 6E-07 49.9 4.5 35 7-41 15-49 (296)
330 3p2y_A Alanine dehydrogenase/p 95.2 0.017 5.9E-07 51.5 4.5 36 6-41 183-218 (381)
331 3uox_A Otemo; baeyer-villiger 95.1 0.018 6.2E-07 54.3 4.9 35 7-41 185-219 (545)
332 1y6j_A L-lactate dehydrogenase 95.1 0.021 7.1E-07 50.0 4.8 35 6-40 6-42 (318)
333 2g1u_A Hypothetical protein TM 95.1 0.019 6.4E-07 44.4 4.1 40 180-219 13-52 (155)
334 2raf_A Putative dinucleotide-b 95.1 0.026 8.9E-07 46.1 5.0 35 7-41 19-53 (209)
335 4ap3_A Steroid monooxygenase; 95.0 0.02 6.8E-07 54.1 4.8 35 7-41 191-225 (549)
336 1zej_A HBD-9, 3-hydroxyacyl-CO 95.0 0.019 6.4E-07 49.6 4.2 33 7-40 12-44 (293)
337 1ks9_A KPA reductase;, 2-dehyd 95.0 0.025 8.4E-07 48.5 4.9 33 9-41 2-34 (291)
338 3i83_A 2-dehydropantoate 2-red 94.9 0.025 8.6E-07 49.5 4.9 33 8-40 3-35 (320)
339 3dfz_A SIRC, precorrin-2 dehyd 94.9 0.02 6.7E-07 47.3 3.9 38 182-219 27-64 (223)
340 3doj_A AT3G25530, dehydrogenas 94.9 0.027 9.4E-07 49.0 5.0 35 7-41 21-55 (310)
341 2ewd_A Lactate dehydrogenase,; 94.8 0.028 9.7E-07 49.1 5.0 34 7-40 4-38 (317)
342 2y0c_A BCEC, UDP-glucose dehyd 94.8 0.026 9.1E-07 52.3 4.9 34 7-40 8-41 (478)
343 3dtt_A NADP oxidoreductase; st 94.8 0.033 1.1E-06 46.7 5.1 35 7-41 19-53 (245)
344 1lld_A L-lactate dehydrogenase 94.8 0.029 9.9E-07 49.0 4.9 34 7-40 7-42 (319)
345 3oj0_A Glutr, glutamyl-tRNA re 94.8 0.015 5E-07 44.4 2.6 34 7-40 21-54 (144)
346 3k6j_A Protein F01G10.3, confi 94.7 0.037 1.3E-06 50.8 5.6 34 8-41 55-88 (460)
347 3ihm_A Styrene monooxygenase A 94.7 0.017 5.8E-07 52.8 3.3 34 186-219 22-55 (430)
348 4hb9_A Similarities with proba 94.7 0.019 6.5E-07 51.6 3.6 32 188-219 3-34 (412)
349 1kyq_A Met8P, siroheme biosynt 94.7 0.026 8.9E-07 48.1 4.1 35 6-40 12-46 (274)
350 3gg2_A Sugar dehydrogenase, UD 94.7 0.031 1E-06 51.4 4.9 33 8-40 3-35 (450)
351 3hn2_A 2-dehydropantoate 2-red 94.6 0.029 9.9E-07 48.9 4.5 33 8-40 3-35 (312)
352 4a7p_A UDP-glucose dehydrogena 94.6 0.035 1.2E-06 50.9 5.2 35 7-41 8-42 (446)
353 1x13_A NAD(P) transhydrogenase 94.6 0.033 1.1E-06 50.4 4.9 35 7-41 172-206 (401)
354 1yvv_A Amine oxidase, flavin-c 94.6 0.02 6.8E-07 50.0 3.3 33 187-219 3-35 (336)
355 2vns_A Metalloreductase steap3 94.5 0.044 1.5E-06 44.9 5.2 34 7-40 28-61 (215)
356 1rp0_A ARA6, thiazole biosynth 94.5 0.025 8.5E-07 48.5 3.8 33 187-219 40-73 (284)
357 3ghy_A Ketopantoate reductase 94.5 0.04 1.4E-06 48.5 5.2 32 8-39 4-35 (335)
358 2ew2_A 2-dehydropantoate 2-red 94.5 0.035 1.2E-06 48.0 4.8 33 8-40 4-36 (316)
359 2a9f_A Putative malic enzyme ( 94.5 0.037 1.2E-06 49.4 4.8 35 6-40 187-222 (398)
360 3oz2_A Digeranylgeranylglycero 94.5 0.021 7.3E-07 50.8 3.4 32 188-219 6-37 (397)
361 3pef_A 6-phosphogluconate dehy 94.5 0.036 1.2E-06 47.6 4.7 34 8-41 2-35 (287)
362 3k96_A Glycerol-3-phosphate de 94.5 0.044 1.5E-06 48.7 5.4 34 7-40 29-62 (356)
363 1kyq_A Met8P, siroheme biosynt 94.5 0.029 9.8E-07 47.8 4.0 37 183-219 10-46 (274)
364 4dll_A 2-hydroxy-3-oxopropiona 94.4 0.036 1.2E-06 48.5 4.6 34 7-40 31-64 (320)
365 3g17_A Similar to 2-dehydropan 94.4 0.037 1.3E-06 47.7 4.7 33 8-40 3-35 (294)
366 1l7d_A Nicotinamide nucleotide 94.4 0.042 1.4E-06 49.4 5.2 35 7-41 172-206 (384)
367 3g79_A NDP-N-acetyl-D-galactos 94.4 0.036 1.2E-06 51.2 4.7 35 7-41 18-54 (478)
368 3rp8_A Flavoprotein monooxygen 94.4 0.03 1E-06 50.5 4.1 35 185-219 22-56 (407)
369 2bry_A NEDD9 interacting prote 94.3 0.031 1.1E-06 52.1 4.2 36 185-220 91-126 (497)
370 4ffl_A PYLC; amino acid, biosy 94.3 0.049 1.7E-06 48.4 5.4 34 8-41 2-35 (363)
371 3vtf_A UDP-glucose 6-dehydroge 94.3 0.048 1.7E-06 49.7 5.3 34 7-40 21-54 (444)
372 2hjr_A Malate dehydrogenase; m 94.3 0.049 1.7E-06 47.8 5.2 35 7-41 14-49 (328)
373 1vl6_A Malate oxidoreductase; 94.3 0.044 1.5E-06 48.8 4.8 35 6-40 191-226 (388)
374 1t2d_A LDH-P, L-lactate dehydr 94.3 0.052 1.8E-06 47.5 5.2 33 8-40 5-38 (322)
375 3vps_A TUNA, NAD-dependent epi 94.3 0.054 1.8E-06 46.8 5.4 41 1-41 1-42 (321)
376 1bg6_A N-(1-D-carboxylethyl)-L 94.2 0.045 1.6E-06 48.4 4.9 33 8-40 5-37 (359)
377 4g65_A TRK system potassium up 94.2 0.024 8.3E-07 52.3 3.1 34 7-40 3-36 (461)
378 1z82_A Glycerol-3-phosphate de 94.1 0.049 1.7E-06 47.9 4.9 34 7-40 14-47 (335)
379 3pdu_A 3-hydroxyisobutyrate de 94.1 0.039 1.3E-06 47.4 4.1 34 8-41 2-35 (287)
380 1zcj_A Peroxisomal bifunctiona 94.1 0.054 1.9E-06 50.0 5.3 33 8-40 38-70 (463)
381 3d1l_A Putative NADP oxidoredu 94.1 0.043 1.5E-06 46.4 4.3 34 7-40 10-44 (266)
382 3l9w_A Glutathione-regulated p 94.0 0.049 1.7E-06 49.5 4.8 34 7-40 4-37 (413)
383 3eag_A UDP-N-acetylmuramate:L- 94.0 0.057 1.9E-06 47.3 5.1 34 7-40 4-38 (326)
384 2xdo_A TETX2 protein; tetracyc 94.0 0.044 1.5E-06 49.3 4.3 34 186-219 26-59 (398)
385 2vou_A 2,6-dihydroxypyridine h 93.9 0.039 1.3E-06 49.6 4.0 35 186-220 5-39 (397)
386 1pjc_A Protein (L-alanine dehy 93.9 0.064 2.2E-06 47.7 5.3 34 7-40 167-200 (361)
387 3g5s_A Methylenetetrahydrofola 93.9 0.036 1.2E-06 49.8 3.5 38 187-224 2-39 (443)
388 1mv8_A GMD, GDP-mannose 6-dehy 93.9 0.046 1.6E-06 50.0 4.3 32 9-40 2-33 (436)
389 2uyy_A N-PAC protein; long-cha 93.9 0.073 2.5E-06 46.3 5.5 34 8-41 31-64 (316)
390 2qyt_A 2-dehydropantoate 2-red 93.9 0.036 1.2E-06 48.1 3.4 31 8-38 9-45 (317)
391 2v6b_A L-LDH, L-lactate dehydr 93.8 0.058 2E-06 46.8 4.7 32 9-40 2-35 (304)
392 3nrn_A Uncharacterized protein 93.8 0.037 1.3E-06 50.1 3.7 33 187-219 1-33 (421)
393 1jw9_B Molybdopterin biosynthe 93.8 0.055 1.9E-06 45.5 4.4 34 7-40 31-65 (249)
394 3alj_A 2-methyl-3-hydroxypyrid 93.8 0.04 1.4E-06 49.2 3.8 35 186-220 11-45 (379)
395 2aef_A Calcium-gated potassium 93.8 0.027 9.4E-07 46.7 2.4 35 6-41 8-42 (234)
396 2o3j_A UDP-glucose 6-dehydroge 93.8 0.052 1.8E-06 50.4 4.5 33 8-40 10-44 (481)
397 4e21_A 6-phosphogluconate dehy 93.7 0.065 2.2E-06 47.6 4.9 34 7-40 22-55 (358)
398 2h78_A Hibadh, 3-hydroxyisobut 93.7 0.056 1.9E-06 46.7 4.4 33 8-40 4-36 (302)
399 1ryi_A Glycine oxidase; flavop 93.7 0.036 1.2E-06 49.3 3.2 33 187-219 18-50 (382)
400 3tl2_A Malate dehydrogenase; c 93.6 0.077 2.6E-06 46.2 5.1 34 7-40 8-42 (315)
401 3ka7_A Oxidoreductase; structu 93.6 0.04 1.4E-06 49.9 3.4 33 187-219 1-33 (425)
402 3mog_A Probable 3-hydroxybutyr 93.6 0.07 2.4E-06 49.4 5.1 33 8-40 6-38 (483)
403 2oln_A NIKD protein; flavoprot 93.6 0.048 1.6E-06 48.9 3.8 33 187-219 5-37 (397)
404 2vhw_A Alanine dehydrogenase; 93.6 0.08 2.7E-06 47.4 5.3 34 7-40 168-201 (377)
405 3v76_A Flavoprotein; structura 93.6 0.04 1.4E-06 50.1 3.3 34 186-219 27-60 (417)
406 2eez_A Alanine dehydrogenase; 93.6 0.081 2.8E-06 47.2 5.3 34 7-40 166-199 (369)
407 1jay_A Coenzyme F420H2:NADP+ o 93.5 0.08 2.8E-06 43.0 4.8 32 9-40 2-34 (212)
408 3qsg_A NAD-binding phosphogluc 93.5 0.062 2.1E-06 46.8 4.3 33 7-39 24-57 (312)
409 2q3e_A UDP-glucose 6-dehydroge 93.5 0.06 2E-06 49.7 4.4 33 8-40 6-40 (467)
410 2iid_A L-amino-acid oxidase; f 93.5 0.043 1.5E-06 50.9 3.5 34 186-219 33-66 (498)
411 3pqe_A L-LDH, L-lactate dehydr 93.5 0.078 2.7E-06 46.4 4.9 34 7-40 5-40 (326)
412 4gbj_A 6-phosphogluconate dehy 93.5 0.053 1.8E-06 46.9 3.8 34 8-41 6-39 (297)
413 3ego_A Probable 2-dehydropanto 93.5 0.076 2.6E-06 46.1 4.8 32 8-40 3-34 (307)
414 3dme_A Conserved exported prot 93.4 0.046 1.6E-06 48.2 3.4 33 187-219 5-37 (369)
415 2i6t_A Ubiquitin-conjugating e 93.4 0.072 2.5E-06 46.2 4.6 34 7-40 14-49 (303)
416 4ezb_A Uncharacterized conserv 93.4 0.063 2.2E-06 46.8 4.2 33 8-40 25-58 (317)
417 3c24_A Putative oxidoreductase 93.4 0.095 3.3E-06 44.9 5.3 33 8-40 12-45 (286)
418 3hwr_A 2-dehydropantoate 2-red 93.4 0.078 2.7E-06 46.3 4.8 33 7-40 19-51 (318)
419 3phh_A Shikimate dehydrogenase 93.4 0.092 3.1E-06 44.6 5.0 35 7-41 118-152 (269)
420 3c4a_A Probable tryptophan hyd 93.4 0.047 1.6E-06 48.8 3.4 34 187-220 1-36 (381)
421 1dlj_A UDP-glucose dehydrogena 93.4 0.066 2.3E-06 48.4 4.3 31 9-40 2-32 (402)
422 1nyt_A Shikimate 5-dehydrogena 93.3 0.092 3.1E-06 44.7 5.0 34 7-40 119-152 (271)
423 3q2o_A Phosphoribosylaminoimid 93.3 0.11 3.9E-06 46.5 5.8 36 6-41 13-48 (389)
424 3ius_A Uncharacterized conserv 93.3 0.086 2.9E-06 44.8 4.8 35 7-41 5-39 (286)
425 1txg_A Glycerol-3-phosphate de 93.3 0.068 2.3E-06 46.8 4.3 30 9-38 2-31 (335)
426 3cky_A 2-hydroxymethyl glutara 93.3 0.072 2.5E-06 45.9 4.4 34 7-40 4-37 (301)
427 3nix_A Flavoprotein/dehydrogen 93.3 0.051 1.7E-06 49.1 3.5 33 187-219 6-38 (421)
428 2x3n_A Probable FAD-dependent 93.2 0.051 1.7E-06 48.8 3.5 34 187-220 7-40 (399)
429 4huj_A Uncharacterized protein 93.2 0.052 1.8E-06 44.6 3.2 33 8-40 24-57 (220)
430 2zyd_A 6-phosphogluconate dehy 93.2 0.081 2.8E-06 49.0 4.8 34 7-40 15-48 (480)
431 3gpi_A NAD-dependent epimerase 93.2 0.12 4.1E-06 43.9 5.6 34 8-41 4-37 (286)
432 4e4t_A Phosphoribosylaminoimid 93.2 0.12 4.2E-06 46.9 5.9 35 6-40 34-68 (419)
433 4gwg_A 6-phosphogluconate dehy 93.2 0.093 3.2E-06 48.5 5.1 34 7-40 4-37 (484)
434 2gf2_A Hibadh, 3-hydroxyisobut 93.1 0.088 3E-06 45.2 4.6 32 9-40 2-33 (296)
435 3ggo_A Prephenate dehydrogenas 93.1 0.11 3.8E-06 45.2 5.3 33 8-40 34-68 (314)
436 1guz_A Malate dehydrogenase; o 93.1 0.093 3.2E-06 45.6 4.8 32 9-40 2-35 (310)
437 2pv7_A T-protein [includes: ch 93.1 0.1 3.6E-06 45.0 5.1 33 8-40 22-55 (298)
438 1ldn_A L-lactate dehydrogenase 93.1 0.1 3.5E-06 45.5 5.0 39 1-40 1-41 (316)
439 3cgv_A Geranylgeranyl reductas 93.1 0.055 1.9E-06 48.3 3.4 33 187-219 5-37 (397)
440 2egg_A AROE, shikimate 5-dehyd 93.1 0.1 3.4E-06 45.1 4.9 34 7-40 141-175 (297)
441 2gf3_A MSOX, monomeric sarcosi 93.1 0.057 1.9E-06 48.1 3.5 33 187-219 4-36 (389)
442 2uzz_A N-methyl-L-tryptophan o 93.1 0.043 1.5E-06 48.6 2.7 33 187-219 3-35 (372)
443 3orq_A N5-carboxyaminoimidazol 93.1 0.14 4.9E-06 45.7 6.1 36 6-41 11-46 (377)
444 1k0i_A P-hydroxybenzoate hydro 93.0 0.049 1.7E-06 48.8 3.0 33 187-219 3-35 (394)
445 3c96_A Flavin-containing monoo 93.0 0.063 2.2E-06 48.5 3.7 34 187-220 5-39 (410)
446 1a5z_A L-lactate dehydrogenase 93.0 0.084 2.9E-06 46.1 4.4 32 9-40 2-35 (319)
447 2f1k_A Prephenate dehydrogenas 93.0 0.1 3.4E-06 44.4 4.8 32 9-40 2-33 (279)
448 3d4o_A Dipicolinate synthase s 93.0 0.11 3.9E-06 44.6 5.2 35 6-40 154-188 (293)
449 2r6j_A Eugenol synthase 1; phe 93.0 0.12 4E-06 44.8 5.3 35 7-41 11-46 (318)
450 3gvi_A Malate dehydrogenase; N 93.0 0.11 3.9E-06 45.3 5.1 35 7-41 7-42 (324)
451 2rir_A Dipicolinate synthase, 92.9 0.11 3.9E-06 44.8 5.1 35 6-40 156-190 (300)
452 3d0o_A L-LDH 1, L-lactate dehy 92.9 0.1 3.4E-06 45.6 4.8 34 7-40 6-41 (317)
453 1y56_A Hypothetical protein PH 92.9 0.17 5.7E-06 47.0 6.5 45 91-147 267-311 (493)
454 3nks_A Protoporphyrinogen oxid 92.9 0.059 2E-06 49.6 3.4 33 187-219 3-37 (477)
455 1ur5_A Malate dehydrogenase; o 92.9 0.11 3.8E-06 45.1 5.0 33 8-40 3-36 (309)
456 1c0p_A D-amino acid oxidase; a 92.9 0.073 2.5E-06 47.1 3.9 33 187-219 7-39 (363)
457 1hdo_A Biliverdin IX beta redu 92.9 0.13 4.5E-06 41.1 5.2 34 8-41 4-38 (206)
458 3qj4_A Renalase; FAD/NAD(P)-bi 92.9 0.049 1.7E-06 47.8 2.7 33 187-219 2-37 (342)
459 1id1_A Putative potassium chan 92.9 0.1 3.4E-06 40.0 4.2 34 186-219 3-36 (153)
460 3k7m_X 6-hydroxy-L-nicotine ox 92.9 0.057 1.9E-06 49.0 3.2 32 188-219 3-34 (431)
461 2p4q_A 6-phosphogluconate dehy 92.8 0.11 3.9E-06 48.2 5.2 33 8-40 11-43 (497)
462 2gqf_A Hypothetical protein HI 92.8 0.058 2E-06 48.7 3.1 33 187-219 5-37 (401)
463 1evy_A Glycerol-3-phosphate de 92.8 0.064 2.2E-06 47.7 3.3 32 9-40 17-48 (366)
464 4gde_A UDP-galactopyranose mut 92.8 0.068 2.3E-06 49.6 3.7 33 187-219 11-44 (513)
465 1y56_B Sarcosine oxidase; dehy 92.8 0.059 2E-06 47.9 3.1 33 187-219 6-38 (382)
466 3ew7_A LMO0794 protein; Q8Y8U8 92.7 0.13 4.6E-06 41.6 5.0 32 9-40 2-34 (221)
467 1yqg_A Pyrroline-5-carboxylate 92.7 0.1 3.4E-06 44.0 4.4 32 9-40 2-34 (263)
468 2pgd_A 6-phosphogluconate dehy 92.7 0.12 3.9E-06 48.0 5.1 33 8-40 3-35 (482)
469 2b9w_A Putative aminooxidase; 92.7 0.07 2.4E-06 48.3 3.6 34 186-219 6-40 (424)
470 2g5c_A Prephenate dehydrogenas 92.6 0.12 4.1E-06 44.0 4.8 33 8-40 2-36 (281)
471 2e1m_A L-glutamate oxidase; L- 92.6 0.078 2.7E-06 47.4 3.7 34 185-218 43-76 (376)
472 2cvz_A Dehydrogenase, 3-hydrox 92.6 0.11 3.6E-06 44.4 4.4 31 9-40 3-33 (289)
473 1yj8_A Glycerol-3-phosphate de 92.6 0.088 3E-06 47.0 4.1 34 8-41 22-62 (375)
474 2jae_A L-amino acid oxidase; o 92.6 0.079 2.7E-06 49.0 3.9 34 186-219 11-44 (489)
475 2wtb_A MFP2, fatty acid multif 92.6 0.13 4.6E-06 50.1 5.6 33 8-40 313-345 (725)
476 3e8x_A Putative NAD-dependent 92.6 0.13 4.5E-06 42.4 4.9 34 7-40 21-55 (236)
477 3gt0_A Pyrroline-5-carboxylate 92.6 0.14 4.7E-06 42.8 5.0 33 8-40 3-39 (247)
478 1p77_A Shikimate 5-dehydrogena 92.6 0.098 3.4E-06 44.5 4.1 34 7-40 119-152 (272)
479 2rcy_A Pyrroline carboxylate r 92.6 0.12 3.9E-06 43.6 4.6 34 8-41 5-42 (262)
480 3ldh_A Lactate dehydrogenase; 92.6 0.14 4.9E-06 44.7 5.2 34 7-40 21-56 (330)
481 3tri_A Pyrroline-5-carboxylate 92.6 0.15 5E-06 43.6 5.2 33 8-40 4-39 (280)
482 3rui_A Ubiquitin-like modifier 92.5 0.13 4.6E-06 45.0 4.9 34 7-40 34-68 (340)
483 2gag_B Heterotetrameric sarcos 92.5 0.071 2.4E-06 47.8 3.2 33 187-219 22-56 (405)
484 3g3e_A D-amino-acid oxidase; F 92.5 0.078 2.7E-06 46.6 3.5 33 187-219 1-39 (351)
485 2izz_A Pyrroline-5-carboxylate 92.5 0.13 4.4E-06 44.9 4.8 33 8-40 23-59 (322)
486 1hyh_A L-hicdh, L-2-hydroxyiso 92.5 0.11 3.7E-06 45.1 4.3 33 8-40 2-36 (309)
487 3don_A Shikimate dehydrogenase 92.4 0.13 4.3E-06 44.0 4.5 35 7-41 117-152 (277)
488 1pjq_A CYSG, siroheme synthase 92.4 0.12 4E-06 47.6 4.7 34 7-40 12-45 (457)
489 1vpd_A Tartronate semialdehyde 92.4 0.11 3.8E-06 44.6 4.3 33 8-40 6-38 (299)
490 3atr_A Conserved archaeal prot 92.4 0.064 2.2E-06 49.2 2.9 33 187-219 7-39 (453)
491 3dfu_A Uncharacterized protein 92.4 0.041 1.4E-06 45.6 1.4 34 6-39 5-38 (232)
492 3ic5_A Putative saccharopine d 92.4 0.083 2.9E-06 38.1 3.0 34 186-219 5-39 (118)
493 3p7m_A Malate dehydrogenase; p 92.4 0.15 5.2E-06 44.5 5.1 34 8-41 6-40 (321)
494 3nyc_A D-arginine dehydrogenas 92.4 0.069 2.4E-06 47.3 3.0 33 186-219 9-41 (381)
495 3dje_A Fructosyl amine: oxygen 92.3 0.086 2.9E-06 47.9 3.6 33 187-219 7-40 (438)
496 2ivd_A PPO, PPOX, protoporphyr 92.3 0.074 2.5E-06 49.0 3.2 34 186-219 16-49 (478)
497 1y1p_A ARII, aldehyde reductas 92.3 0.19 6.6E-06 43.7 5.8 35 6-40 10-45 (342)
498 3i6d_A Protoporphyrinogen oxid 92.3 0.053 1.8E-06 49.6 2.2 33 187-219 6-44 (470)
499 1zud_1 Adenylyltransferase THI 92.3 0.13 4.5E-06 43.2 4.4 34 7-40 28-62 (251)
500 2ahr_A Putative pyrroline carb 92.2 0.14 4.7E-06 43.1 4.6 33 8-40 4-36 (259)
No 1
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=1.7e-42 Score=329.48 Aligned_cols=295 Identities=19% Similarity=0.318 Sum_probs=237.3
Q ss_pred CCeEEEECCChHHHHHHHHHH-hcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCC----CCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLS-LQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~-~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 81 (325)
.+||+|||||++|+++|..|+ +.|++|+|||+++.+||+|..+.|++++++.+...+.++..+ .+.+...++++.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 899999999999999999999999999999998888776431 123445678899
Q ss_pred HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc
Q 020533 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~ 161 (325)
++.+|+.+.++++++..+++++++|+++++++..+.|+|++.++ .+ +.||+||+|||.++.|..|++||++.
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHG-------EV-YRAKYVVNAVGLLSAINFPNLPGLDT 159 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTS-------CE-EEEEEEEECCCSCCSBCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCC-------CE-EEeCEEEECCcccccCCCCCCCCccc
Confidence 99999999999999877789999999999988667999998764 56 89999999999999999999999999
Q ss_pred cccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHHHH----HHHhh
Q 020533 162 FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGV----VLFKY 237 (325)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~~~----~~~~~ 237 (325)
| .|..+|+..+.+..++.+|+|+|||+|.+|+|+|..|++.+.+||+++|++.|++|+.+..++. .+.+.
T Consensus 160 f------~g~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~i~p~~~~~~~~~~~~~l~~~ 233 (540)
T 3gwf_A 160 F------EGETIHTAAWPEGKSLAGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQYSVPVGNRPVNPEQIAEIKAD 233 (540)
T ss_dssp C------CSEEEEGGGCCSSCCCTTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCCCEEECCCCBCCHHHHHHHHHT
T ss_pred c------CCCEEEeecCCCccccccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCccCCCCHHHHHHHHhc
Confidence 9 9999999999988889999999999999999999999999999999999999999986542211 11111
Q ss_pred CCHHHH--------------------------HHH----------------------------------HHHHHHHHhcC
Q 020533 238 VPFGWV--------------------------DTL----------------------------------MVMLSRLVYGD 257 (325)
Q Consensus 238 ~p~~~~--------------------------~~~----------------------------------~~~~~~~~~~~ 257 (325)
+|.... ... .....+..+.+
T Consensus 234 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~d 313 (540)
T 3gwf_A 234 YDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTFGDIATDEAANEAAASFIRAKVAEIIED 313 (540)
T ss_dssp HHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSCSCTTTCHHHHHHHHHHHHHHHHHHCCS
T ss_pred cHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhhhhhhcCHHHHHHHHHHHHHHHHHHcCC
Confidence 111100 000 00000111111
Q ss_pred ccccCCCCCCCCchhhhhccCceeeeChhhhhhhhCCceEEe---cC-CeeeecCceEEeeecceecCCC
Q 020533 258 LSKYGIPKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQSE---QQ-NSQIGAQTRTELLLKTWLGTDT 323 (325)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~~~---~~-i~~~~~~~~v~~~dg~~~~~d~ 323 (325)
........|+ ...|++++++++|++++++++|+++ .. |++|+++| |.++||+.+++|.
T Consensus 314 p~~~~~l~P~-------~~g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~~g-v~~~dG~~~~~Dv 375 (540)
T 3gwf_A 314 PETARKLMPK-------GLFAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTAKG-VVTEDGVLHELDV 375 (540)
T ss_dssp HHHHHHHCCC-------SCCCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECSSE-EEETTCCEEECSE
T ss_pred HHHHHhCCCC-------CCCccccCCCccHHHHhcCCCEEEEeCCCCCccEEecCe-EEcCCCCEEECCE
Confidence 1100111122 3468999999999999999999999 55 99999987 7799999999984
No 2
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=4.1e-42 Score=327.35 Aligned_cols=300 Identities=22% Similarity=0.299 Sum_probs=235.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCC----CCCCCCCCCCHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLP----FPSSYPMFVSRAQ 82 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~ 82 (325)
.+||+|||||++|+++|..|++.|++|+|||+++.+||+|..+.|++++++++...+.++..+ .+.+...++++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 469999999999999999999999999999999999999999999999999999888877542 2345567889999
Q ss_pred HHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccc
Q 020533 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (325)
Q Consensus 83 ~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~ 162 (325)
+.+|+.+.++++++..+++++++|+++++++..+.|+|++.++ .+ +.||+||+|||.++.|..|++||++.|
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G-------~~-i~ad~lV~AtG~~s~p~~p~ipG~~~f 172 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRG-------DE-VSARFLVVAAGPLSNANTPAFDGLDRF 172 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSEEECCCCCCTTGGGC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCcccC
Confidence 9999999999999877889999999999988777999998764 56 899999999998889999999999999
Q ss_pred ccCCCCCccEEecCCCC-CCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHHHHHHH----hh
Q 020533 163 CSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVLF----KY 237 (325)
Q Consensus 163 ~~~~~~~g~~~~~~~~~-~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~~~~~~----~~ 237 (325)
.|..+|+..|. +..++.+|+|+|||+|.+|+|+|..|++.+.+||+++|++.|++|+.+..+..... +.
T Consensus 173 ------~g~~~~~~~~~~~~~~~~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~~ilp~~~~~~~~~~~~~l~~~ 246 (549)
T 4ap3_A 173 ------TGDIVHTARWPHDGVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSANYSIPAGNVPLDDATRAEQKAN 246 (549)
T ss_dssp ------CSEEEEGGGCCTTCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECC----CHHHHHHHHHT
T ss_pred ------CCceEEeccccccccccCCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCCccccCcCCCCCHHHHHHHHhc
Confidence 99999999998 57788999999999999999999999999999999999999999987653322111 11
Q ss_pred CCHHHHH--------------------------HHHHH-------------------------HHHHHhcCccccCCCCC
Q 020533 238 VPFGWVD--------------------------TLMVM-------------------------LSRLVYGDLSKYGIPKP 266 (325)
Q Consensus 238 ~p~~~~~--------------------------~~~~~-------------------------~~~~~~~~~~~~~~~~~ 266 (325)
+|..... .+++. ....+...+ +..+..|
T Consensus 247 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~d~ 325 (549)
T 4ap3_A 247 YAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQLTDPAANDTARAFWEEKI-RAVVDDP 325 (549)
T ss_dssp HHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTTTTCHHHHHHHHHHHHHHH-HHHCSCH
T ss_pred cHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhhhcCHHHHHHHHHHHHHHH-HHHcCCH
Confidence 1111100 00000 000000000 0000011
Q ss_pred CCCchhh---hhccCceeeeChhhhhhhhCCceEEe---cC-CeeeecCceEEeeecceecCCC
Q 020533 267 REGPFFM---KAAYGKYPVIDAGTCEKIKSGQIQSE---QQ-NSQIGAQTRTELLLKTWLGTDT 323 (325)
Q Consensus 267 ~~~~~~~---~~~~~~~~~~~~~~~~~l~~g~v~~~---~~-i~~~~~~~~v~~~dg~~~~~d~ 323 (325)
+....+. -...|+++++++++++++++++|+++ .. |++++++| |.++|| .+++|+
T Consensus 326 ~~~~~l~P~~~~~~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g-v~~~dG-~~~~D~ 387 (549)
T 4ap3_A 326 AVAELLTPKDHAIGAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG-IVTTGA-HYDLDM 387 (549)
T ss_dssp HHHHHHSCSSCCBTTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE-EEESSC-EEECSE
T ss_pred HHHHhCCCCCCCCCccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc-EEeCCC-ceecCE
Confidence 1100011 13458999999999999999999999 66 99999987 678999 899984
No 3
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=7.2e-42 Score=325.43 Aligned_cols=297 Identities=20% Similarity=0.251 Sum_probs=232.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCC----CCCCCCCCCHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (325)
..+||+|||||++|+++|..|++.|++++|||+++.+||+|..++|++++++.+...+.+++.+. ..+...++++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 35799999999999999999999999999999999999999999999999999887777654332 24445788999
Q ss_pred HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc
Q 020533 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~ 161 (325)
++.+|+.+.++++++..+++++++|+++++++..+.|.|++.++ .+ +.||+||+|+|.++.|..|++||++.
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~lV~AtG~~s~p~~p~ipG~~~ 159 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNE-------EV-VTCRFLISATGPLSASRMPDIKGIDS 159 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTT-------EE-EEEEEEEECCCSCBC---CCCTTGGG
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCC-------CE-EEeCEEEECcCCCCCCcCCCCCCccc
Confidence 99999999999999977889999999999987778999998764 67 89999999999989999999999999
Q ss_pred cccCCCCCccEEecCCCCCC-------CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHHH---
Q 020533 162 FCSSATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLG--- 231 (325)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~-------~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~~--- 231 (325)
| .|..+|+..|... .++.+|+|+|||+|.+|+|+|..|++.+.+||+++|++.|++|+.+.++.
T Consensus 160 f------~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~~i~p~~~~~~~~~~ 233 (545)
T 3uox_A 160 F------KGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPNWCTPLGNSPMSKEK 233 (545)
T ss_dssp C------CSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCCCCEECCCCBCCHHH
T ss_pred c------CCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCCccccCCcCCCCHHH
Confidence 9 9999999999886 77889999999999999999999999999999999999999997654211
Q ss_pred -HHHHhhCCHHH--------------------------HHHHHH---------------------------------HHH
Q 020533 232 -VVLFKYVPFGW--------------------------VDTLMV---------------------------------MLS 251 (325)
Q Consensus 232 -~~~~~~~p~~~--------------------------~~~~~~---------------------------------~~~ 251 (325)
..+.+.+|... ...++. ...
T Consensus 234 ~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (545)
T 3uox_A 234 MDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGFRDLLLNKESNKFLADFVAKKI 313 (545)
T ss_dssp HHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSBTTTTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhhhhhhcCHHHHHHHHHHHHHHH
Confidence 11111111110 000000 000
Q ss_pred HHHhcCccccCCCCCCCCchhhhhccCceeeeChhhhhhhhCCceEEe---cC-CeeeecCceEEeeecceecCCC
Q 020533 252 RLVYGDLSKYGIPKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQSE---QQ-NSQIGAQTRTELLLKTWLGTDT 323 (325)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~~~---~~-i~~~~~~~~v~~~dg~~~~~d~ 323 (325)
+..+.+..-.....|. .-...|+++.+++++++++++++|+++ .. |++++++| |.+.|| .+++|+
T Consensus 314 ~~~v~d~~~~~~l~P~-----~~~~g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it~~g-v~~~dG-~~~~D~ 382 (545)
T 3uox_A 314 RQRVKDPVVAEKLIPK-----DHPFGAKRVPMETNYYETYNRDNVHLVDIREAPIQEVTPEG-IKTADA-AYDLDV 382 (545)
T ss_dssp HHHCSCHHHHHHTSCS-----SSCTTSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEETTE-EEESSC-EEECSE
T ss_pred HHHcCCHHHHHhCCCC-----CCCCCCCccCCCccHHHHhcCCCEEEEecCCCCceEEccCe-EEeCCC-eeecCE
Confidence 0011110000001120 013458999999999999999999999 55 99999987 678999 899984
No 4
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=1.5e-40 Score=317.29 Aligned_cols=297 Identities=20% Similarity=0.265 Sum_probs=231.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCC----CCCCCCCCCHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPF----PSSYPMFVSRA 81 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 81 (325)
..+||+|||||++|+++|..|++.|++++|||+++.+||+|..++|++++++.+...+.+++.+. ..+...++++.
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 94 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQP 94 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHH
Confidence 35799999999999999999999999999999999999999999999999998887777664331 12334688999
Q ss_pred HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc
Q 020533 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~ 161 (325)
++.+|+..+++++++..+++++++|++++++++.+.|+|++.++ .+ +.||+||+|+|.++.|..|++||++.
T Consensus 95 ~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G-------~~-~~ad~vV~AtG~~s~p~~p~i~G~~~ 166 (542)
T 1w4x_A 95 EILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHG-------DR-IRARYLIMASGQLSVPQLPNFPGLKD 166 (542)
T ss_dssp HHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTC-------CE-EEEEEEEECCCSCCCCCCCCCTTGGG
T ss_pred HHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCC-------CE-EEeCEEEECcCCCCCCCCCCCCCccc
Confidence 99999999999999888889999999999987667899988754 46 89999999999999999999999999
Q ss_pred cccCCCCCccEEecCCCC-CCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH----HHHHHHHh
Q 020533 162 FCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV----YLGVVLFK 236 (325)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~-~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~----~~~~~~~~ 236 (325)
| .|.++|+..|. +..++.+|+|+|||+|.+|+|++..++..+.+|+++.|++.|++|+... .....+.+
T Consensus 167 f------~G~~~hs~~~~~~~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~vtv~~r~~~~~~p~~~~~~~~~~~~~~~~ 240 (542)
T 1w4x_A 167 F------AGNLYHTGNWPHEPVDFSGQRVGVIGTGSSGIQVSPQIAKQAAELFVFQRTPHFAVPARNAPLDPEFLADLKK 240 (542)
T ss_dssp C------CSEEEEGGGCCSSCCCCBTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCCCEEECCCCBCCHHHHHHHHT
T ss_pred C------CCceEECCCCCCchhccCCCEEEEECCCccHHHHHHHHhhcCceEEEEEcCCcccccCCCCCCCHHHHHHHHh
Confidence 9 99999999998 4467889999999999999999999999999999999999998886542 11111111
Q ss_pred hCCHH--------------------------HHHHHHHH--------------------------------HHHHHhcCc
Q 020533 237 YVPFG--------------------------WVDTLMVM--------------------------------LSRLVYGDL 258 (325)
Q Consensus 237 ~~p~~--------------------------~~~~~~~~--------------------------------~~~~~~~~~ 258 (325)
.+|.. ....++.. ..+..+.+.
T Consensus 241 ~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (542)
T 1w4x_A 241 RYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDILRDRDANERVAEFIRNKIRNTVRDP 320 (542)
T ss_dssp THHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTTTTCHHHHHHHHHHHHHHHHHHCSSH
T ss_pred hCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHcCCH
Confidence 11110 00000000 000000110
Q ss_pred cccCCCCCCCCchhhhhccCceeeeChhhhhhhhCCceEEe---cC-CeeeecCceEEeeecceecCCC
Q 020533 259 SKYGIPKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQSE---QQ-NSQIGAQTRTELLLKTWLGTDT 323 (325)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~~~---~~-i~~~~~~~~v~~~dg~~~~~d~ 323 (325)
.-.....|. .-.+.|++++++++|++++++++|+++ .. |++|++++ |.++| +.+++|+
T Consensus 321 ~~~~~l~P~-----~~~~~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g-v~~~d-~~~~~D~ 382 (542)
T 1w4x_A 321 EVAERLVPK-----GYPFGTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG-VRTSE-REYELDS 382 (542)
T ss_dssp HHHHHHSCC-----SSCSSSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE-EEESS-CEEECSE
T ss_pred HHHHhcCCC-----CCCccccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe-EEeCC-eEEecCE
Confidence 000011121 013468999999999999999999998 55 99999986 67889 8899985
No 5
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=4.6e-35 Score=274.17 Aligned_cols=203 Identities=19% Similarity=0.382 Sum_probs=176.2
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCC---eEEEecCCCCCCccCCC---------------CCCceEeecCCCccCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSL---QSIP---YVILERENCYASIWKKY---------------SYDRLRLHLAKQFCQLP 66 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~---~g~~---v~v~e~~~~~Gg~w~~~---------------~y~~~~~~~~~~~~~~~ 66 (325)
+||+|||||++||++|..|++ .|++ |+|||+++.+||+|... .|+.++.+.++..+.++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 699999999999999999999 9999 99999999999999863 35556666666666676
Q ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 67 HLPFPSS----YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 67 ~~~~~~~----~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
.++++.. .+.++++.++.+|+.++++++++..+++++++|++++..+..+.|+|++.+...+ +..+ +.||+||
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g--~~~~-~~~d~VV 159 (464)
T 2xve_A 83 DYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTD--TIYS-EEFDYVV 159 (464)
T ss_dssp TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEE
T ss_pred CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCC--ceEE-EEcCEEE
Confidence 6665432 2678899999999999999999886679999999999876556899998774322 3356 8999999
Q ss_pred EcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 143 iAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+|||+++.|+.|.+||++.| .|.++|+..+.+...+.+|+|+|||+|++|+|+|..|++.|.+|+++.|++
T Consensus 160 vAtG~~s~p~~p~ipG~~~~------~g~~~hs~~~~~~~~~~~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 160 CCTGHFSTPYVPEFEGFEKF------GGRILHAHDFRDALEFKDKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp ECCCSSSSBCCCCCBTTTTC------CSEEEEGGGCCCGGGGTTSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred ECCCCCCCCccCCCCCcccC------CceEEehhhhCCHhHcCCCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 99999999999999999999 899999999988777889999999999999999999999999999999987
No 6
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=2.5e-33 Score=261.57 Aligned_cols=205 Identities=21% Similarity=0.321 Sum_probs=168.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCC---------------------------------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSY--------------------------------- 51 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y--------------------------------- 51 (325)
.+||+|||||++||++|..|++.|. +|+|||+++.+||.|.....
T Consensus 6 ~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~~ 85 (447)
T 2gv8_A 6 IRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPLY 85 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCCC
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCchh
Confidence 5799999999999999999999999 99999999999999986432
Q ss_pred CceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCce
Q 020533 52 DRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGRE 131 (325)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~ 131 (325)
..+..+.+...+.++.++++.+.+.++++.++.+|+.+++++++ .+++++++|++++..+ +.|.|++.+..++ +
T Consensus 86 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~--~~i~~~t~V~~v~~~~--~~~~V~~~~~~~G--~ 159 (447)
T 2gv8_A 86 RDLQTNTPIELMGYCDQSFKPQTLQFPHRHTIQEYQRIYAQPLL--PFIKLATDVLDIEKKD--GSWVVTYKGTKAG--S 159 (447)
T ss_dssp TTCBCSSCHHHHSCTTCCCCTTCCSSCBHHHHHHHHHHHHGGGG--GGEECSEEEEEEEEET--TEEEEEEEESSTT--C
T ss_pred hhhccCCCHHHhccCCCCCCCCCCCCCCHHHHHHHHHHHHHHhh--CeEEeCCEEEEEEeCC--CeEEEEEeecCCC--C
Confidence 22233333344456667777777788999999999999999885 4569999999998764 6799998763222 1
Q ss_pred -eEEEEEeCeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccC
Q 020533 132 -IEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAA 210 (325)
Q Consensus 132 -~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~ 210 (325)
..+ +.||+||+|||+++.|++|.+||++.|. ....|.++|+..+.+...+++++|+|||+|++|+|+|..|++.+.
T Consensus 160 ~~~~-~~~d~VVvAtG~~s~p~~p~i~G~~~~~--~~~~g~v~~~~~~~~~~~~~~k~VvVvG~G~sg~e~A~~l~~~~~ 236 (447)
T 2gv8_A 160 PISK-DIFDAVSICNGHYEVPYIPNIKGLDEYA--KAVPGSVLHSSLFREPELFVGESVLVVGGASSANDLVRHLTPVAK 236 (447)
T ss_dssp CEEE-EEESEEEECCCSSSSBCBCCCBTHHHHH--HHSTTSEEEGGGCCCGGGGTTCCEEEECSSHHHHHHHHHHTTTSC
T ss_pred eeEE-EEeCEEEECCCCCCCCCCCCCCChhhhh--ccCCccEEEecccCChhhcCCCEEEEEccCcCHHHHHHHHHHHhC
Confidence 247 8999999999998899999999987530 000467999999988777889999999999999999999999999
Q ss_pred e-EEEEEecCC
Q 020533 211 K-TSLVVRSPV 220 (325)
Q Consensus 211 ~-v~~~~r~~~ 220 (325)
+ |+++.|++.
T Consensus 237 ~~V~l~~r~~~ 247 (447)
T 2gv8_A 237 HPIYQSLLGGG 247 (447)
T ss_dssp SSEEEECTTCC
T ss_pred CcEEEEeCCCC
Confidence 9 999999883
No 7
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=6.9e-33 Score=250.34 Aligned_cols=273 Identities=22% Similarity=0.365 Sum_probs=216.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
++||+|||||++|+++|..|+++|++|+|||+++.+||.|.. .|+.+.+..+...+.++.++.+.+...++++.++.+|
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQH-AWHSLHLFSPAGWSSIPGWPMPASQGPYPARAEVLAY 81 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGG-SCTTCBCSSCGGGSCCSSSCCCCCSSSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccC-CCCCcEecCchhhhhCCCCCCCCCccCCCCHHHHHHH
Confidence 379999999999999999999999999999999999999985 5888888888888888888888777888999999999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+.++++++++.. +++++|++++.++ +.|. |++.+ .+ +.||+||+|||.++.|..|.+||.+.+
T Consensus 82 l~~~~~~~~~~~--~~~~~v~~i~~~~--~~~~~v~~~~--------g~-~~~d~vV~AtG~~~~~~~~~~~g~~~~--- 145 (357)
T 4a9w_A 82 LAQYEQKYALPV--LRPIRVQRVSHFG--ERLRVVARDG--------RQ-WLARAVISATGTWGEAYTPEYQGLESF--- 145 (357)
T ss_dssp HHHHHHHTTCCE--ECSCCEEEEEEET--TEEEEEETTS--------CE-EEEEEEEECCCSGGGBCCCCCTTGGGC---
T ss_pred HHHHHHHcCCEE--EcCCEEEEEEECC--CcEEEEEeCC--------CE-EEeCEEEECCCCCCCCCCCCCCCcccc---
Confidence 999999999774 9999999998875 6788 77654 36 899999999998888999999999998
Q ss_pred CCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHHHHHHHhhCCHHHHHH
Q 020533 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYLGVVLFKYVPFGWVDT 245 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~~~~~~~~~p~~~~~~ 245 (325)
.+..+|+..+.+...+++++|+|||+|.+|+|+|..|++.+ +|+++.|++.+++|...... .+..++...+.+
T Consensus 146 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~~~~~~~~~~~~--~~~~~~~~~~~~- 218 (357)
T 4a9w_A 146 ---AGIQLHSAHYSTPAPFAGMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHEPAFLADDVDGR--VLFERATERWKA- 218 (357)
T ss_dssp ---CSEEEEGGGCCCSGGGTTSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSCCCBCCTTCCTH--HHHTC--------
T ss_pred ---CCcEEEeccCCChhhcCCCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCCCeecchhhcCc--cHHHHHHHHHhc-
Confidence 89999999998888889999999999999999999999998 69999999768888764311 111111111000
Q ss_pred HHHHHHHHHhcCccccCCCCCCCCchhhhhccCceeeeChhhhhhhhCCceEEecCCeeeecCceEEeeecceecCCC
Q 020533 246 LMVMLSRLVYGDLSKYGIPKPREGPFFMKAAYGKYPVIDAGTCEKIKSGQIQSEQQNSQIGAQTRTELLLKTWLGTDT 323 (325)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~v~~~~~i~~~~~~~~v~~~dg~~~~~d~ 323 (325)
.....+.... ......+.+.......+..|.+.....++++++++ +.+.||+++++|+
T Consensus 219 ------------~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~i~~~~~v~~~~~~~-v~~~~g~~i~~D~ 276 (357)
T 4a9w_A 219 ------------QQEGREPDLP-------PGGFGDIVMVPPVLDARARGVLAAVPPPARFSPTG-MQWADGTERAFDA 276 (357)
T ss_dssp ----------------------------------CBCCCHHHHHHHHTTCCCEECCCSEEETTE-EECTTSCEEECSE
T ss_pred ------------cccccCCCcc-------cccccCcccChhHHHHHhcCceEEecCcceEeCCe-eEECCCCEecCCE
Confidence 0000000000 00112345667778888889888887899999875 8899999999984
No 8
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=99.97 E-value=1.1e-30 Score=246.60 Aligned_cols=201 Identities=22% Similarity=0.339 Sum_probs=156.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--------------CeEEEecCCCCCCccCCC-CCCceEeecC--CCccCCCC--
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--------------PYVILERENCYASIWKKY-SYDRLRLHLA--KQFCQLPH-- 67 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--------------~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~--~~~~~~~~-- 67 (325)
-+||+|||+||+||++|+.|.+.|. ..+.+|+.+.++ |..+ .|++.+++++ +.+..+.+
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 3799999999999999999987543 467788887776 7654 3788887765 22222111
Q ss_pred C---------------CCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCC------CcEEEEEeecC
Q 020533 68 L---------------PFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEAT------NMWNVKASNLL 126 (325)
Q Consensus 68 ~---------------~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~------~~~~v~~~~~~ 126 (325)
. +++.+...|+++.++.+||+++|++++ .+++|+++|+++++.+.+ +.|+|++.++.
T Consensus 117 s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~--~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~ 194 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFS--DVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVE 194 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTG--GGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETT
T ss_pred CccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcC--CceEcceEEEeeccccccccccccceEEEEEecCC
Confidence 1 122334578999999999999999987 456999999999987643 35999999876
Q ss_pred CCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCC------CCCCCCCeEEEECcCCCHHH
Q 020533 127 SPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKN------GKPYGGKNVLVVGSGNSGME 200 (325)
Q Consensus 127 ~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~------~~~~~~~~v~VvG~G~s~~e 200 (325)
++ +..+ +.|+.||+||| ..|. +|+...| .|.++|+++|.+ ...++||+|+|||+|+||+|
T Consensus 195 ~g--~~~~-~~ar~vVlatG--~~P~---iP~~~~~------~g~v~Hss~y~~~~~~~~~~~~~gKrV~VVG~G~SA~e 260 (501)
T 4b63_A 195 TG--EISA-RRTRKVVIAIG--GTAK---MPSGLPQ------DPRIIHSSKYCTTLPALLKDKSKPYNIAVLGSGQSAAE 260 (501)
T ss_dssp TC--CEEE-EEEEEEEECCC--CEEC---CCTTSCC------CTTEEEGGGHHHHHHHHSCCTTSCCEEEEECCSHHHHH
T ss_pred Cc--eEEE-EEeCEEEECcC--CCCC---CCCCCCC------CcceeeccccccchhhccccccCCcEEEEECCcHHHHH
Confidence 65 4467 89999999999 4555 4555567 889999999875 45689999999999999999
Q ss_pred HHHHHhhc--cCeEEEEEecCCeeechh
Q 020533 201 IALDLANH--AAKTSLVVRSPVHVLSRE 226 (325)
Q Consensus 201 ~a~~l~~~--~~~v~~~~r~~~~~~p~~ 226 (325)
++.+|++. +.+|++++|++ ++.|..
T Consensus 261 i~~~L~~~~~~~~v~~~~R~~-~~~p~~ 287 (501)
T 4b63_A 261 IFHDLQKRYPNSRTTLIMRDS-AMRPSD 287 (501)
T ss_dssp HHHHHHHHSTTCEEEEECSSS-SCCBCC
T ss_pred HHHHHHhcCCCceEEEEeCCC-cccccc
Confidence 99999876 67899999998 455544
No 9
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.94 E-value=1e-26 Score=207.88 Aligned_cols=187 Identities=18% Similarity=0.327 Sum_probs=151.5
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCH
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
|.+....+||+|||||++|+++|..|++.|++|+|||+++.+||.|.. .|+...+. .++.+ ...+.
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~-~~~~~~~~------~~~~~-------~~~~~ 66 (332)
T 3lzw_A 1 MREDTKVYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSA-LYPEKYIY------DVAGF-------PKIRA 66 (332)
T ss_dssp CEEEEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHH-HCTTSEEC------CSTTC-------SSEEH
T ss_pred CCCCCccceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehh-cCCCceEe------ccCCC-------CCCCH
Confidence 443334579999999999999999999999999999999999999953 24333221 11111 12357
Q ss_pred HHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC-CCCCCCCCCc
Q 020533 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRGL 159 (325)
Q Consensus 81 ~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~-~p~~p~~~g~ 159 (325)
.++.+|+.+.++++++. ++++++|.+++... .+.|.|.+.+ .+ +.+|+||+|||..+ .|..|++||.
T Consensus 67 ~~~~~~~~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~~d~vVlAtG~~~~~p~~~~~~g~ 134 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQT--ICLEQAVESVEKQA-DGVFKLVTNE--------ET-HYSKTVIITAGNGAFKPRKLELENA 134 (332)
T ss_dssp HHHHHHHHHHHTTSCCE--EECSCCEEEEEECT-TSCEEEEESS--------EE-EEEEEEEECCTTSCCEECCCCCTTG
T ss_pred HHHHHHHHHHHHHhCCc--EEccCEEEEEEECC-CCcEEEEECC--------CE-EEeCEEEECCCCCcCCCCCCCCCCh
Confidence 89999999999988754 58999999998875 3479998876 46 88999999999643 7888999999
Q ss_pred cccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
+.| .+..+|+ .+.+...+++++++|||+|.+|+|+|..|.+.+.+|+++.|.+.
T Consensus 135 ~~~------~g~~~~~-~~~~~~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~ 188 (332)
T 3lzw_A 135 EQY------EGKNLHY-FVDDLQKFAGRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDK 188 (332)
T ss_dssp GGG------BTTTEES-SCSCGGGGBTCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred hhc------cCceEEE-ecCCHHHcCCCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCc
Confidence 988 7777887 66666677899999999999999999999999999999999883
No 10
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.94 E-value=7.4e-26 Score=199.20 Aligned_cols=171 Identities=15% Similarity=0.167 Sum_probs=136.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 87 (325)
+||+|||||++|+++|..|++.|++|+|||+++..+..+... ..+ +. ....+..++.+++
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~~~~~~-------------~~~-----~~--~~~~~~~~~~~~~ 62 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNRFASHS-------------HGF-----LG--QDGKAPGEIIAEA 62 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGGGCSCC-------------CSS-----TT--CTTCCHHHHHHHH
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccccchhh-------------cCC-----cC--CCCCCHHHHHHHH
Confidence 799999999999999999999999999999987544322110 001 11 1245678999999
Q ss_pred HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCCC
Q 020533 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSAT 167 (325)
Q Consensus 88 ~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~~ 167 (325)
.+.+.+++... .++++|++++.++ +.|.|++.++ .+ +.||+||+||| ..|..|.+||.+.+
T Consensus 63 ~~~~~~~~~v~--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~vviAtG--~~~~~~~~~g~~~~----- 123 (297)
T 3fbs_A 63 RRQIERYPTIH--WVEGRVTDAKGSF--GEFIVEIDGG-------RR-ETAGRLILAMG--VTDELPEIAGLRER----- 123 (297)
T ss_dssp HHHHTTCTTEE--EEESCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--CEEECCCCBTTGGG-----
T ss_pred HHHHHhcCCeE--EEEeEEEEEEEcC--CeEEEEECCC-------CE-EEcCEEEECCC--CCCCCCCCCCchhh-----
Confidence 99998873222 4466899998875 6698988764 56 89999999999 57888899999887
Q ss_pred CCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 168 GTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 168 ~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+..++...+.+...+++++|+|||+|.+|+|+|..|.+.| +|+++.|.+
T Consensus 124 -~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~ 173 (297)
T 3fbs_A 124 -WGSAVFHCPYCHGYELDQGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGI 173 (297)
T ss_dssp -BTTTEESCHHHHTGGGTTCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTT
T ss_pred -cCCeeEEcccCcchhhcCCEEEEEecCccHHHHHHHhhhcC-cEEEEECCC
Confidence 77777777666666778999999999999999999999998 999998887
No 11
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.93 E-value=1.9e-25 Score=200.29 Aligned_cols=181 Identities=22% Similarity=0.370 Sum_probs=141.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|... |+...+ +..+.+ ......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~-------~~~~~~~~~~~ 70 (335)
T 2zbw_A 5 HTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTAL-YPEKYI------YDVAGF-------PKVYAKDLVKG 70 (335)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHT-CTTSEE------CCSTTC-------SSEEHHHHHHH
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeecc-CCCcee------eccCCC-------CCCCHHHHHHH
Confidence 5799999999999999999999999999999999999998643 332211 111111 12356788999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC-CCCCCCCCCccccccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRGLCSFCSS 165 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~-~p~~p~~~g~~~~~~~ 165 (325)
+.+.++++++. ++++++|.+++.++ +.|.|.+.++ .+ +.+|+||+|||..+ .|..|+++|.+.+
T Consensus 71 l~~~~~~~~~~--~~~~~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~lv~AtG~~~~~p~~~~i~g~~~~--- 135 (335)
T 2zbw_A 71 LVEQVAPFNPV--YSLGERAETLEREG--DLFKVTTSQG-------NA-YTAKAVIIAAGVGAFEPRRIGAPGEREF--- 135 (335)
T ss_dssp HHHHHGGGCCE--EEESCCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCTTSEEEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCE--EEeCCEEEEEEECC--CEEEEEECCC-------CE-EEeCEEEECCCCCCCCCCCCCCCChhhc---
Confidence 99999888854 48899999998875 4788877543 46 89999999999643 6778889998877
Q ss_pred CCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|.. +.+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 136 ---~~~~~~~~-~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~ 186 (335)
T 2zbw_A 136 ---EGRGVYYA-VKSKAEFQGKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQ 186 (335)
T ss_dssp ---BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSS
T ss_pred ---cCcEEEEe-cCchhhcCCCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCc
Confidence 55444433 3333456789999999999999999999999999999999983
No 12
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.93 E-value=2.2e-25 Score=198.44 Aligned_cols=173 Identities=17% Similarity=0.237 Sum_probs=140.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
++||+|||||++|+++|..|++.|++|+|||++ +||.|.... ..+.++.+ ......++.+|
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAG----------IVDDYLGL-------IEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCC----------EECCSTTS-------TTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeecccc----------cccccCCC-------CCCCHHHHHHH
Confidence 469999999999999999999999999999999 899887520 01111111 12457899999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
+.+.++++++.. ++ ++|.+++.++ +.|.+.+.++ .+ +.+|+||+||| +.|..|.+||.+.|
T Consensus 76 ~~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~~---- 136 (323)
T 3f8d_A 76 FNKHIEKYEVPV--LL-DIVEKIENRG--DEFVVKTKRK-------GE-FKADSVILGIG--VKRRKLGVPGEQEF---- 136 (323)
T ss_dssp HHHHHHTTTCCE--EE-SCEEEEEEC----CEEEEESSS-------CE-EEEEEEEECCC--CEECCCCCTTTTTT----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEecC--CEEEEEECCC-------CE-EEcCEEEECcC--CCCccCCCCchhhh----
Confidence 999999998765 66 8899998764 6788887664 46 89999999999 55888899999888
Q ss_pred CCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+..+|...+.+...+.+++|+|||+|.+|+|+|..|.+.+.+|++++|++
T Consensus 137 --~~~~~~~~~~~~~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~ 187 (323)
T 3f8d_A 137 --AGRGISYCSVADAPLFKNRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRD 187 (323)
T ss_dssp --BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSS
T ss_pred --cCCceEEeccCCHhHcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCC
Confidence 777777666655566778999999999999999999999999999999998
No 13
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.93 E-value=1.1e-25 Score=201.72 Aligned_cols=181 Identities=15% Similarity=0.224 Sum_probs=142.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC----CCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE----NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~----~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
.++||+|||||++||++|..|++.|++|+|||+. ..+||.|.... ....++. ++.+....
T Consensus 21 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~----------~~~~~~~------~~~~~~~~ 84 (338)
T 3itj_A 21 VHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT----------EIENFPG------FPDGLTGS 84 (338)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS----------EECCSTT------CTTCEEHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch----------hhcccCC------CcccCCHH
Confidence 3579999999999999999999999999999994 48899887531 0011111 12345678
Q ss_pred HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc
Q 020533 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~ 161 (325)
++.+|+.+.++++++.. ++++ |.+++.+. +.|.+.+.....+ .. +.+|+||+|+| +.|..|.+||.+.
T Consensus 85 ~~~~~~~~~~~~~gv~i--~~~~-v~~i~~~~--~~~~v~~~~~~~~----~~-~~~d~vvlAtG--~~~~~~~~~g~~~ 152 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEI--ITET-VSKVDLSS--KPFKLWTEFNEDA----EP-VTTDAIILATG--ASAKRMHLPGEET 152 (338)
T ss_dssp HHHHHHHHHHHHTTCEE--ECSC-EEEEECSS--SSEEEEETTCSSS----CC-EEEEEEEECCC--EEECCCCCTTHHH
T ss_pred HHHHHHHHHHHHcCCEE--EEeE-EEEEEEcC--CEEEEEEEecCCC----cE-EEeCEEEECcC--CCcCCCCCCCchh
Confidence 99999999999998654 8888 88887754 6788877532222 56 88999999999 5788889999887
Q ss_pred cccCCCCCccEEecCCCCCCC--CCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 162 FCSSATGTGEVIHSTQYKNGK--PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 162 ~~~~~~~~g~~~~~~~~~~~~--~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
| .+..+++..+.+.. .+.+++++|||+|.+|+|+|..|.+.+.+|+++.|++.
T Consensus 153 ~------~~~~~~~~~~~~~~~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~ 207 (338)
T 3itj_A 153 Y------WQKGISACAVCDGAVPIFRNKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDH 207 (338)
T ss_dssp H------BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred c------cCccEEEchhcccchhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCc
Confidence 7 66667765543333 56789999999999999999999999999999999983
No 14
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.93 E-value=3e-25 Score=207.82 Aligned_cols=203 Identities=23% Similarity=0.354 Sum_probs=146.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-----CCeEEEecCCCCCCccCCCCC-CceEeecCC--CccCC--CCCCC------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS-----IPYVILERENCYASIWKKYSY-DRLRLHLAK--QFCQL--PHLPF------ 70 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g-----~~v~v~e~~~~~Gg~w~~~~y-~~~~~~~~~--~~~~~--~~~~~------ 70 (325)
.+||+|||||++||++|..|++.| .+|+|||+++.+| |....+ ++..++.+. .+..+ +..++
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999999888 665544 333332110 00000 00000
Q ss_pred ---------CCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCC-CCcE--EEEEeecCCCCceeEEEEEe
Q 020533 71 ---------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMW--NVKASNLLSPGREIEEYYSG 138 (325)
Q Consensus 71 ---------~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~-~~~~--~v~~~~~~~~~~~~~~~~~a 138 (325)
+.+...++++.++.+|+.+++++++.. ++++++|++++++++ .+.| .|++.++.+ +..+ +.|
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g---~~~~-~~~ 181 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQ--SRYGEEVLRIEPMLSAGQVEALRVISRNADG---EELV-RTT 181 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTT--EEESEEEEEEEEEEETTEEEEEEEEEEETTS---CEEE-EEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEEecCCCceEEEEEEEecCCC---ceEE-EEe
Confidence 111234678899999999999998855 499999999988622 2455 566655432 2247 999
Q ss_pred CeEEEcccCCCCCCCCCCCCccccccCCCCCc--cEEecCCCCCC-CCC-----CCCeEEEECcCCCHHHHHHHHhhc--
Q 020533 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTG--EVIHSTQYKNG-KPY-----GGKNVLVVGSGNSGMEIALDLANH-- 208 (325)
Q Consensus 139 d~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g--~~~~~~~~~~~-~~~-----~~~~v~VvG~G~s~~e~a~~l~~~-- 208 (325)
|+||+||| +.|.+|+ +++.+ .+ .++|+..+.+. ..+ ++++|+|||+|.+|+|+|..|++.
T Consensus 182 d~lVlAtG--~~p~~p~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~sg~e~a~~l~~~~~ 251 (463)
T 3s5w_A 182 RALVVSPG--GTPRIPQ--VFRAL------KGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQSAAEAFIDLNDSYP 251 (463)
T ss_dssp SEEEECCC--CEECCCG--GGGGG------TTCTTEEEGGGHHHHHCC-------CEEEEEECCSHHHHHHHHHHHHHCT
T ss_pred CEEEECCC--CCCCCcc--hhhhc------CCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCHhHHHHHHHHHhcCC
Confidence 99999999 5676665 24455 55 78998877552 233 689999999999999999999999
Q ss_pred cCeEEEEEecCCeeechhhH
Q 020533 209 AAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 209 ~~~v~~~~r~~~~~~p~~~~ 228 (325)
+.+|+++.|++ .++|....
T Consensus 252 ~~~Vt~v~r~~-~~~p~~~~ 270 (463)
T 3s5w_A 252 SVQADMILRAS-ALKPADDS 270 (463)
T ss_dssp TEEEEEECSSS-SCCBCCCC
T ss_pred CCeEEEEEeCC-CCcCccCC
Confidence 88999999999 47776544
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.93 E-value=7.7e-25 Score=195.58 Aligned_cols=184 Identities=20% Similarity=0.331 Sum_probs=141.0
Q ss_pred CCCCC-CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCC
Q 020533 1 MKEQA-AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (325)
Q Consensus 1 M~~~~-~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (325)
|+.+. ..+||+|||||++|+++|..|++.|++|+|||++ .+||.|.... ....++.+ +...+
T Consensus 1 m~~~~~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~------~~~~~ 63 (325)
T 2q7v_A 1 MTAPTAHDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSE----------EVENFPGF------PEPIA 63 (325)
T ss_dssp -CCCCCEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC------SSCBC
T ss_pred CCCCccccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccc----------ccccCCCC------CCCCC
Confidence 54332 3579999999999999999999999999999999 6898876431 00111111 12346
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCC-cEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCC
Q 020533 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATN-MWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRG 158 (325)
Q Consensus 80 ~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~-~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g 158 (325)
..++.+++.+.++++++.. ++ ++|.+++.+...+ .|.|.+.++ .+ +.+|+||+||| +.|..|++||
T Consensus 64 ~~~~~~~l~~~~~~~gv~~--~~-~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~i~g 130 (325)
T 2q7v_A 64 GMELAQRMHQQAEKFGAKV--EM-DEVQGVQHDATSHPYPFTVRGYN-------GE-YRAKAVILATG--ADPRKLGIPG 130 (325)
T ss_dssp HHHHHHHHHHHHHHTTCEE--EE-CCEEEEEECTTSSSCCEEEEESS-------CE-EEEEEEEECCC--EEECCCCCTT
T ss_pred HHHHHHHHHHHHHHcCCEE--Ee-eeEEEEEeccCCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCC
Confidence 7889999999999998654 55 6888888752112 388877654 46 89999999999 5678888999
Q ss_pred ccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 159 LCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+.+ .+..+|+..+.+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 131 ~~~~------~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 186 (325)
T 2q7v_A 131 EDNF------WGKGVSTCATCDGFFYKGKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDT 186 (325)
T ss_dssp TTTT------BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred hhhc------cCceEEEeccCCHHHcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCc
Confidence 8877 6666776554444456789999999999999999999999999999999883
No 16
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.93 E-value=6.2e-25 Score=199.45 Aligned_cols=186 Identities=20% Similarity=0.317 Sum_probs=136.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCCccCCCCCCceEeecCCC---ccCCCCCCC--CCC------C
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQ---FCQLPHLPF--PSS------Y 74 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~---~~~~~~~~~--~~~------~ 74 (325)
.+||+|||||++|+++|..|++.|. +|+|||+++ +||.|...... .....+.. .+.+..+.. +.. .
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKS-TRTITPSFTSNGFGMPDMNAISMDTSPAFTFN 81 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTT-CBCSSCCCCCGGGTCCCTTCSSTTCCHHHHHC
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCccc-ccccCcchhcccCCchhhhhcccccccccccc
Confidence 4799999999999999999999999 999999998 99988643111 11111111 111111110 111 1
Q ss_pred CCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 75 PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 75 ~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
..++...++.+|+.++++++++. ++++++|.+++.++ +.|.|.+.+ .+ +.||+||+|||.++.|
T Consensus 82 ~~~~~~~~~~~~l~~~~~~~gv~--i~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~~d~vVlAtG~~~~p--- 145 (369)
T 3d1c_A 82 EEHISGETYAEYLQVVANHYELN--IFENTVVTNISADD--AYYTIATTT--------ET-YHADYIFVATGDYNFP--- 145 (369)
T ss_dssp CSSCBHHHHHHHHHHHHHHTTCE--EECSCCEEEEEECS--SSEEEEESS--------CC-EEEEEEEECCCSTTSB---
T ss_pred ccCCCHHHHHHHHHHHHHHcCCe--EEeCCEEEEEEECC--CeEEEEeCC--------CE-EEeCEEEECCCCCCcc---
Confidence 24567789999999999999865 48999999998764 578888754 24 7899999999976554
Q ss_pred CCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCe
Q 020533 155 DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (325)
Q Consensus 155 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~ 221 (325)
.+|+ + ..+|+..+.+...+++++|+|||+|.+|+|+|..|++.|.+|+++.|++.+
T Consensus 146 ~ip~-~----------~~~~~~~~~~~~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~ 201 (369)
T 3d1c_A 146 KKPF-K----------YGIHYSEIEDFDNFNKGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGL 201 (369)
T ss_dssp CCCS-S----------SCEEGGGCSCGGGSCSSEEEEECCSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CCCC-C----------ceechhhcCChhhcCCCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCC
Confidence 3444 2 246777777666678899999999999999999999999999999999843
No 17
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.92 E-value=1.4e-24 Score=196.72 Aligned_cols=181 Identities=19% Similarity=0.314 Sum_probs=141.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|... ++.... +..+.+ ......++.++
T Consensus 14 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~-~~~~~~------~~~~~~-------~~~~~~~~~~~ 79 (360)
T 3ab1_A 14 MRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAAL-YPEKHI------YDVAGF-------PEVPAIDLVES 79 (360)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHT-CTTSEE------CCSTTC-------SSEEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccc-CCCccc------ccCCCC-------CCCCHHHHHHH
Confidence 5799999999999999999999999999999999999988632 322111 111111 11356788999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC-CCCCCCCCC-cccccc
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT-NPFTPDIRG-LCSFCS 164 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~-~p~~p~~~g-~~~~~~ 164 (325)
+.+.++++++. ++++++|++++.++ .+.|.|++.++ .+ +.||+||+|+|..+ .|..|++|| .+.+
T Consensus 80 l~~~~~~~~~~--~~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-~~~~~li~AtG~~~~~~~~~~i~g~~~~~-- 146 (360)
T 3ab1_A 80 LWAQAERYNPD--VVLNETVTKYTKLD-DGTFETRTNTG-------NV-YRSRAVLIAAGLGAFEPRKLPQLGNIDHL-- 146 (360)
T ss_dssp HHHHHHTTCCE--EECSCCEEEEEECT-TSCEEEEETTS-------CE-EEEEEEEECCTTCSCCBCCCGGGCCCTTT--
T ss_pred HHHHHHHhCCE--EEcCCEEEEEEECC-CceEEEEECCC-------cE-EEeeEEEEccCCCcCCCCCCCCCCchhhC--
Confidence 99999988754 48899999998864 34788887653 46 89999999999654 677788888 7777
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+..+|.. +.+...+.+++|+|||+|.+|+|+|..|.+.+.+|+++.|++
T Consensus 147 ----~~~~v~~~-~~~~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~ 196 (360)
T 3ab1_A 147 ----TGSSVYYA-VKSVEDFKGKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGH 196 (360)
T ss_dssp ----BTTTEESS-CSCGGGGTTCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSS
T ss_pred ----cCceEEEe-cCCHHHcCCCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC
Confidence 56545443 334445678999999999999999999999999999999988
No 18
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.92 E-value=1.3e-24 Score=192.79 Aligned_cols=175 Identities=21% Similarity=0.339 Sum_probs=138.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
+||+|||||++|+++|..|++.|+ +|+|||++ ..||.|.... ....++. ++......++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~----------~~~~~~~------~~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSS----------EIENYPG------VKEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCS----------CBCCSTT------CCSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccccc----------ccccCCC------CcccCCHHHHHHH
Confidence 699999999999999999999999 99999995 6788876421 0001111 1234577899999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
+.+.++++++.. ++ ++|.+++.++ +.|.|.+.++ .+ +.+|+||+||| +.|..|++||.+.|
T Consensus 65 l~~~~~~~~v~~--~~-~~v~~i~~~~--~~~~v~~~~g-------~~-~~~~~vv~AtG--~~~~~~~~~g~~~~---- 125 (311)
T 2q0l_A 65 WQEQCFRFGLKH--EM-TAVQRVSKKD--SHFVILAEDG-------KT-FEAKSVIIATG--GSPKRTGIKGESEY---- 125 (311)
T ss_dssp HHHHHHTTSCEE--EC-SCEEEEEEET--TEEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCBTHHHH----
T ss_pred HHHHHHHcCCEE--EE-EEEEEEEEcC--CEEEEEEcCC-------CE-EECCEEEECCC--CCCCCCCCCChhhc----
Confidence 999999888653 66 7899998765 5688876543 46 89999999999 67788899998877
Q ss_pred CCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|+..+.+.....+++|+|||+|.+|+|+|..|++.|.+|+++.|++.
T Consensus 126 --~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 177 (311)
T 2q0l_A 126 --WGKGVSTCATCDGFFYKNKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDG 177 (311)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred --cCCcEEEeecCChhhcCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCc
Confidence 6666776554444456789999999999999999999999999999999884
No 19
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.92 E-value=1.9e-24 Score=191.78 Aligned_cols=178 Identities=21% Similarity=0.319 Sum_probs=142.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEE-EecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVI-LERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v-~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
.++||+|||||++||++|..|++.|++|+| +|+ +.+||.|..... ...++ .++...+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~----------~~~~~------~~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSE----------IENYP------GVAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSC----------BCCST------TCCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeece----------eccCC------CCCCCCCHHHHH
Confidence 357999999999999999999999999999 999 678998864310 00111 112345788999
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
+|+.++++++++.. +++ +|.++ .++..+.|.+..... . + +.+|+||+||| +.|..|.+||.+.+
T Consensus 66 ~~~~~~~~~~~v~~--~~~-~v~~i-~~~~~~~~~v~~~~~-----~--~-~~~d~lvlAtG--~~~~~~~~~g~~~~-- 129 (315)
T 3r9u_A 66 APWSEQCMRFGLKH--EMV-GVEQI-LKNSDGSFTIKLEGG-----K--T-ELAKAVIVCTG--SAPKKAGFKGEDEF-- 129 (315)
T ss_dssp HHHHHHHTTTCCEE--ECC-CEEEE-EECTTSCEEEEETTS-----C--E-EEEEEEEECCC--EEECCCCCBTTTTT--
T ss_pred HHHHHHHHHcCcEE--EEE-EEEEE-ecCCCCcEEEEEecC-----C--E-EEeCEEEEeeC--CCCCCCCCCChhhc--
Confidence 99999999998654 676 78888 654336788644432 2 6 89999999999 67888999999888
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|+..+.+...+.+++++|||+|.+|+|+|..|.+.+.+|++++|++.
T Consensus 130 ----~~~~~~~~~~~~~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~ 181 (315)
T 3r9u_A 130 ----FGKGVSTCATCDGFFYKNKEVAVLGGGDTALEEALYLANICSKIYLIHRRDE 181 (315)
T ss_dssp ----BTTTEESCHHHHGGGGTTSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSS
T ss_pred ----CCCeEEeeecccccccCcCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCC
Confidence 7778887766665667789999999999999999999999999999999984
No 20
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.92 E-value=1e-24 Score=193.74 Aligned_cols=183 Identities=17% Similarity=0.268 Sum_probs=131.6
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCH
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (325)
|++. .|||+||||||+|++||.+|++.|++|+|||+. .+||++.... ....++.+ .....
T Consensus 2 Mte~--~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~-~~gG~~~~~~----------~i~~~p~~-------~~~~~ 61 (312)
T 4gcm_A 2 MTEI--DFDIAIIGAGPAGMTAAVYASRANLKTVMIERG-IPGGQMANTE----------EVENFPGF-------EMITG 61 (312)
T ss_dssp --CC--SEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCS----------CBCCSTTC-------SSBCH
T ss_pred CCCC--CCCEEEECCCHHHHHHHHHHHHCCCCEEEEecC-CCCCeeeccc----------ccCCcCCc-------cccch
Confidence 5443 589999999999999999999999999999986 4777654210 01111111 23456
Q ss_pred HHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcc
Q 020533 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLC 160 (325)
Q Consensus 81 ~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~ 160 (325)
.++.........+..... ..+..+...... ....+ ..++ .+ +.||+||+||| +.|+.|++||.+
T Consensus 62 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~-~~~~-------~~-~~~d~liiAtG--s~~~~~~ipG~~ 125 (312)
T 4gcm_A 62 PDLSTKMFEHAKKFGAVY--QYGDIKSVEDKG---EYKVI-NFGN-------KE-LTAKAVIIATG--AEYKKIGVPGEQ 125 (312)
T ss_dssp HHHHHHHHHHHHHTTCEE--EECCCCEEEECS---SCEEE-ECSS-------CE-EEEEEEEECCC--EEECCCCCTTTT
T ss_pred HHHHHHHHHHHhhccccc--cceeeeeeeeee---cceee-ccCC-------eE-EEeceeEEccc--CccCcCCCCChh
Confidence 677777777776665433 444444333322 22222 2222 57 89999999999 789999999998
Q ss_pred ccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechh
Q 020533 161 SFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (325)
Q Consensus 161 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~ 226 (325)
.+ .+..+++....+...+++|+|+|||+|++|+|+|..|++.|.+||+++|++ .++|..
T Consensus 126 ~~------~~~~v~~~~~~~~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~~~~~ 184 (312)
T 4gcm_A 126 EL------GGRGVSYCAVCDGAFFKNKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD-ELRAQR 184 (312)
T ss_dssp TT------BTTTEESCHHHHGGGGTTCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS-SCCSCH
T ss_pred hh------CCccEEeeeccCccccCCCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc-ccCcch
Confidence 87 677777666655566788999999999999999999999999999999998 455543
No 21
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.92 E-value=4.7e-24 Score=191.40 Aligned_cols=176 Identities=19% Similarity=0.267 Sum_probs=136.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++.+ +......++.+
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~~------~~~~~~~~~~~ 75 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTD----------VENYPGF------RNGITGPELMD 75 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSC----------BCCSTTC------TTCBCHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccch----------hhhcCCC------CCCCCHHHHHH
Confidence 3579999999999999999999999999999976 67887754210 0011111 12245678999
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEE-EEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNV-KASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v-~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
++.+.++++++.. ++++ |.+++. .+.|+| .+.++ .+ +.+|+||+||| +.|..|++||.+.|
T Consensus 76 ~l~~~~~~~~v~~--~~~~-v~~i~~---~~~~~v~~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~g~~~~-- 137 (335)
T 2a87_A 76 EMREQALRFGADL--RMED-VESVSL---HGPLKSVVTADG-------QT-HRARAVILAMG--AAARYLQVPGEQEL-- 137 (335)
T ss_dssp HHHHHHHHTTCEE--ECCC-EEEEEC---SSSSEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTHHHHT--
T ss_pred HHHHHHHHcCCEE--EEee-EEEEEe---CCcEEEEEeCCC-------CE-EEeCEEEECCC--CCccCCCCCchHhc--
Confidence 9999999988654 7776 888876 356888 65443 46 89999999999 56788889998877
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|+..+.+.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 138 ----~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~ 189 (335)
T 2a87_A 138 ----LGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDE 189 (335)
T ss_dssp ----BTTTEESCHHHHGGGGTTCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred ----cCCceEEeeccchhhcCCCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCc
Confidence 6666776544333345789999999999999999999999999999999883
No 22
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.91 E-value=4.5e-24 Score=189.24 Aligned_cols=177 Identities=19% Similarity=0.267 Sum_probs=137.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
++||+|||||++|+++|..|++.|++++|+|+ ..||.|.... . ++.+. ...+....++.++
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~--~-----------~~~~~----~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTV--D-----------IENYI----SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCC--E-----------ECCBT----TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccc--c-----------ccccc----CcCCCCHHHHHHH
Confidence 36999999999999999999999999999986 4788886421 0 00000 0123456789999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCC-CCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+.++++++++. ++++++|..++.+.. .+.|.|.+.++ .+ +.||+||+||| +.|..|++||.+.|
T Consensus 62 ~~~~~~~~~v~--~~~~~~v~~i~~~~~~~~~~~v~~~~g-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~--- 126 (310)
T 1fl2_A 62 LKVHVDEYDVD--VIDSQSASKLIPAAVEGGLHQIETASG-------AV-LKARSIIVATG--AKWRNMNVPGEDQY--- 126 (310)
T ss_dssp HHHHHHTSCEE--EECSCCEEEEECCSSTTCCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT---
T ss_pred HHHHHHHcCCe--EEccCEEEEEEecccCCceEEEEECCC-------CE-EEeCEEEECcC--CCcCCCCCCChhhc---
Confidence 99999988754 488889999976532 24788887653 46 89999999999 56777889998877
Q ss_pred CCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|+....+...+.+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 127 ---~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 178 (310)
T 1fl2_A 127 ---RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 178 (310)
T ss_dssp ---BTTTEESCHHHHGGGGBTCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSS
T ss_pred ---ccceeEEeccCcHhhcCCCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcc
Confidence 6665665543333445689999999999999999999999999999999984
No 23
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.91 E-value=7.9e-24 Score=188.44 Aligned_cols=175 Identities=18% Similarity=0.295 Sum_probs=135.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|..... ...++. ++......++.++
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~----------~~~~~~------~~~~~~~~~~~~~ 67 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGM-EKGGQLTTTTE----------VENWPG------DPNDLTGPLLMER 67 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS-STTGGGGGCSB----------CCCSTT------CCSSCBHHHHHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccC-CCCceEecchh----------hhhCCC------CCCCCCHHHHHHH
Confidence 479999999999999999999999999999975 67887653210 001111 1123456789999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
+.+.++++++.. ++++ +..++.+. +.|++ ..++ .+ +.+|+||+||| +.|..|++||.+.|
T Consensus 68 ~~~~~~~~~~~~--~~~~-v~~i~~~~--~~~~v-~~~~-------~~-~~~~~lv~AtG--~~~~~~~~~g~~~~---- 127 (320)
T 1trb_A 68 MHEHATKFETEI--IFDH-INKVDLQN--RPFRL-NGDN-------GE-YTCDALIIATG--ASARYLGLPSEEAF---- 127 (320)
T ss_dssp HHHHHHHTTCEE--ECCC-EEEEECSS--SSEEE-EESS-------CE-EEEEEEEECCC--EEECCCCCHHHHHT----
T ss_pred HHHHHHHCCCEE--EEee-eeEEEecC--CEEEE-EeCC-------CE-EEcCEEEECCC--CCcCCCCCCChHHh----
Confidence 999999988654 7775 88887654 67887 4432 46 89999999999 56788889998777
Q ss_pred CCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|+..+.+.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 128 --~~~~~~~~~~~~~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~ 179 (320)
T 1trb_A 128 --KGRGVSACATSDGFFYRNQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDG 179 (320)
T ss_dssp --BTTTEESCHHHHGGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred --CCceeEecccCCccccCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCc
Confidence 6666665544443445789999999999999999999999999999999884
No 24
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.91 E-value=6.4e-24 Score=190.12 Aligned_cols=176 Identities=15% Similarity=0.218 Sum_probs=135.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEec----CCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILER----ENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~----~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (325)
.+||+|||||++|+++|..|++.|++|+|||+ ....||.|.... ....++.+ +......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~----------~~~~~~~~------~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT----------DVENFPGF------PEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS----------EECCSTTC------TTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc----------ccccCCCC------ccCCCHHH
Confidence 47999999999999999999999999999999 566777765321 00111111 12245678
Q ss_pred HHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc-
Q 020533 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS- 161 (325)
Q Consensus 83 ~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~- 161 (325)
+.+++.+.++++++.. ++++ |.+++.+. +.|+|++ ++ .+ +.+|+||+|+| +.|..|++||.+.
T Consensus 72 ~~~~l~~~~~~~gv~~--~~~~-v~~i~~~~--~~~~v~~-~~-------~~-~~~~~vv~A~G--~~~~~~~~~g~~~~ 135 (333)
T 1vdc_A 72 LTDKFRKQSERFGTTI--FTET-VTKVDFSS--KPFKLFT-DS-------KA-ILADAVILAIG--AVAKRLSFVGSGEV 135 (333)
T ss_dssp HHHHHHHHHHHTTCEE--ECCC-CCEEECSS--SSEEEEC-SS-------EE-EEEEEEEECCC--EEECCCCCBTCSSS
T ss_pred HHHHHHHHHHHCCCEE--EEeE-EEEEEEcC--CEEEEEE-CC-------cE-EEcCEEEECCC--CCcCCCCCCCcccc
Confidence 9999999999888654 7776 88887654 6788887 32 57 89999999999 5677888998766
Q ss_pred ---cccCCCCCccEEecCCCCCCCC--CCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 162 ---FCSSATGTGEVIHSTQYKNGKP--YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 162 ---~~~~~~~~g~~~~~~~~~~~~~--~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
| .+..+|+..+.+... ..+++|+|||+|.+|+|+|..|.+.+.+|+++.|++.
T Consensus 136 ~~~~------~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~ 193 (333)
T 1vdc_A 136 LGGF------WNRGISACAVCDGAAPIFRNKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDA 193 (333)
T ss_dssp SSCC------BTTTEESCHHHHTTSGGGTTSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSS
T ss_pred cccc------ccCcEEEeccCccchhhcCCCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCc
Confidence 5 555666554433333 5789999999999999999999999999999999984
No 25
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.91 E-value=1.3e-23 Score=187.08 Aligned_cols=174 Identities=16% Similarity=0.315 Sum_probs=133.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++.|++|+|||+. .+||.|.... ....++.+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~----------~~~~~~~~-------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDKA-VAGGLTAEAP----------LVENYLGF-------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTGGGGGCS----------CBCCBTTB-------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCC-CCCccccccc----------hhhhcCCC-------cccCHHHHHHH
Confidence 479999999999999999999999999999994 6788775321 00011110 13456788999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
+.+.++++++. +++ .+|.+++.+. +.|.|.+.+ .+ +.+|+||+|+| +.|..|++||.+.+
T Consensus 78 ~~~~~~~~~v~--~~~-~~v~~i~~~~--~~~~v~~~~--------~~-~~~~~li~AtG--~~~~~~~i~g~~~~---- 137 (319)
T 3cty_A 78 FADHAANYAKI--REG-VEVRSIKKTQ--GGFDIETND--------DT-YHAKYVIITTG--TTHKHLGVKGESEY---- 137 (319)
T ss_dssp HHHHHHTTSEE--EET-CCEEEEEEET--TEEEEEESS--------SE-EEEEEEEECCC--EEECCCCCBTTTTT----
T ss_pred HHHHHHHcCCE--EEE-eeEEEEEEeC--CEEEEEECC--------CE-EEeCEEEECCC--CCcccCCCCChHHh----
Confidence 99999988754 355 6888888764 568776622 46 88999999999 56788889988766
Q ss_pred CCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 167 TGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..+|.....+.....+++|+|||+|.+|+|+|..|++.+.+|+++.|++.
T Consensus 138 --~~~~~~~~~~~~~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~ 189 (319)
T 3cty_A 138 --FGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPK 189 (319)
T ss_dssp --BTTTEESCHHHHGGGGBTSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSS
T ss_pred --CCceEEEEEecchhhcCCCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCc
Confidence 5555555433333345689999999999999999999999999999999884
No 26
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.90 E-value=9.5e-24 Score=187.42 Aligned_cols=182 Identities=15% Similarity=0.250 Sum_probs=132.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.|||+||||||+|++||.+|+++|++|+|||+.. .||.+...+.+. ......++. ++...+..++.++
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~G~~~~-----~~~i~~~~g------~~~~i~~~~l~~~ 71 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAGGQLTT-----TTIIENFPG------FPNGIDGNELMMN 71 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTTCGGGG-----SSEECCSTT------CTTCEEHHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccCCCcCC-----hHHhhhccC------CcccCCHHHHHHH
Confidence 5899999999999999999999999999999976 344332221110 011111111 1234567889999
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
+.+.+++++.. .....+....... ..+.+.+.+. .+ +.+|+||+||| +.|+.|++||.+.+
T Consensus 72 ~~~~~~~~~~~---~~~~~v~~~~~~~--~~~~~~~~~~-------~~-~~~~~liiATG--~~~~~~~ipG~~~~---- 132 (314)
T 4a5l_A 72 MRTQSEKYGTT---IITETIDHVDFST--QPFKLFTEEG-------KE-VLTKSVIIATG--ATAKRMHVPGEDKY---- 132 (314)
T ss_dssp HHHHHHHTTCE---EECCCEEEEECSS--SSEEEEETTC-------CE-EEEEEEEECCC--EEECCCCCTTHHHH----
T ss_pred HHHHHhhcCcE---EEEeEEEEeecCC--CceEEEECCC-------eE-EEEeEEEEccc--ccccccCCCccccc----
Confidence 99999988764 3344455555443 4455555443 57 89999999999 78889999999876
Q ss_pred CCCccEEecCCCCCC--CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCe
Q 020533 167 TGTGEVIHSTQYKNG--KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~--~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~ 221 (325)
.+..++...+.+. ..+++++++|||+|++|+|+|..|++.|.+||+++|.+..
T Consensus 133 --~~~~~~~~~~~~~~~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~ 187 (314)
T 4a5l_A 133 --WQNGVSACAICDGAVPIFRNKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF 187 (314)
T ss_dssp --BTTTEESCHHHHTTSGGGTTSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC
T ss_pred --cccceeeehhhhhhhhhcCCCeEEEECCChHHHHHHHHHHHhCCeeeeecccccc
Confidence 5555665544332 2356899999999999999999999999999999998743
No 27
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.90 E-value=8.6e-23 Score=193.61 Aligned_cols=178 Identities=19% Similarity=0.266 Sum_probs=140.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..+||+|||||++|+++|..|++.|++++|+|+ .+||.|.... . ...+.. ..+....++.+
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~--~--------~~~~~~-------~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTV--D--------IENYIS-------VPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCS--C--------BCCBTT-------BSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCcccccc--c--------ccccCC-------CCCCCHHHHHH
Confidence 467999999999999999999999999999986 5788886421 0 000000 01346788999
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCC-CCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEA-TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~-~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
++.+.++++++. ++++++|.+++++.. .+.|.|++.++ .+ +.+|+||+||| +.|..|++||.+.|
T Consensus 272 ~l~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~V~~~~g-------~~-~~~d~vVlAtG--~~~~~~~ipG~~~~-- 337 (521)
T 1hyu_A 272 ALKAHVSDYDVD--VIDSQSASKLVPAATEGGLHQIETASG-------AV-LKARSIIIATG--AKWRNMNVPGEDQY-- 337 (521)
T ss_dssp HHHHHHHTSCEE--EECSCCEEEEECCSSTTSCEEEEETTS-------CE-EEEEEEEECCC--EEECCCCCTTTTTT--
T ss_pred HHHHHHHHcCCE--EEcCCEEEEEEeccCCCceEEEEECCC-------CE-EEcCEEEECCC--CCcCCCCCCChhhh--
Confidence 999999988865 488989999986432 34788887654 46 89999999999 56777889998887
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+..++.....+...+.+++|+|||+|++|+|+|..|+..+.+|+++.|.+.
T Consensus 338 ----~~~~v~~~~~~~~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~ 389 (521)
T 1hyu_A 338 ----RTKGVTYCPHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPE 389 (521)
T ss_dssp ----TTTTEECCTTCCGGGGBTSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSS
T ss_pred ----cCceEEEeecCchhhcCCCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcc
Confidence 6666666555444456789999999999999999999999999999999884
No 28
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.90 E-value=4.5e-23 Score=182.57 Aligned_cols=175 Identities=13% Similarity=0.215 Sum_probs=127.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++|||+||||||+||+||.+|++.|++|+|||++. .||.+..+ |+ .++.. ...+..++.+
T Consensus 5 ~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~-~gg~~~~~-~~--------------~~~~~----~~~~~~~~~~ 64 (304)
T 4fk1_A 5 KYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNT-NRNRVTQN-SH--------------GFITR----DGIKPEEFKE 64 (304)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSC-CGGGGSSC-BC--------------CSTTC----TTBCHHHHHH
T ss_pred CCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC-CCCeeeee-cC--------------CccCC----CCCCHHHHHH
Confidence 46899999999999999999999999999999975 45543222 11 11111 1234567777
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
...+.+.+++... ++...+..+...+ .+.+++.+.++ .+ +.||+||+||| +.|+.|++||.+.+
T Consensus 65 ~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~v~~~~g-------~~-~~a~~liiATG--s~p~~p~i~G~~~~--- 128 (304)
T 4fk1_A 65 IGLNEVMKYPSVH--YYEKTVVMITKQS-TGLFEIVTKDH-------TK-YLAERVLLATG--MQEEFPSIPNVREY--- 128 (304)
T ss_dssp HHHHHHTTSTTEE--EEECCEEEEEECT-TSCEEEEETTC-------CE-EEEEEEEECCC--CEEECCSCTTHHHH---
T ss_pred HHHHHHHhcCCEE--EEeeEEEEeeecC-CCcEEEEECCC-------CE-EEeCEEEEccC--CccccccccCcccc---
Confidence 7666666665433 4555566665543 46678877664 57 89999999999 78999999999887
Q ss_pred CCCCccEEecCCCCCCCCCCCCeEEEECcCCC-HHHHHHHHhhccCeEEEEEecC
Q 020533 166 ATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNS-GMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s-~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+..++.....+...+++++++|||+|.. +.|+|..+.+.+.+|+++.|.+
T Consensus 129 ---~~~~v~~~~~~~~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~ 180 (304)
T 4fk1_A 129 ---YGKSLFSCPYCDGWELKDQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGN 180 (304)
T ss_dssp ---BTTTEESCHHHHSGGGTTSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSC
T ss_pred ---ccceeeeccccchhHhcCCceeeecCCCchhhhHHHHHHhCCceEEEEeccc
Confidence 66666655555555677889999998865 5788888888889999888776
No 29
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.87 E-value=1.4e-21 Score=185.43 Aligned_cols=193 Identities=16% Similarity=0.188 Sum_probs=131.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecCCC----ccCCCCCC-CCCCCCCCC
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLAKQ----FCQLPHLP-FPSSYPMFV 78 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~~~----~~~~~~~~-~~~~~~~~~ 78 (325)
+.++||+|||||++|+++|..|++.|.+|+|||+++.+||+|.+.. .+...+..... ......+. ++.....++
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~ 120 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDMTEKVV 120 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCCTTCCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHHHhhhh
Confidence 3468999999999999999999999999999999998999886321 11100000000 00001111 222223345
Q ss_pred CHHHHHHHHHH-------HH-----HHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEccc
Q 020533 79 SRAQFIEHLDH-------YV-----SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (325)
Q Consensus 79 ~~~~~~~yl~~-------~a-----~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG 146 (325)
+..++.+++.. .. ++.++.. +++.++..++. ++|.+. + .. +.+|+||+|||
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~--~~~~~v~~i~~------~~v~~~-g-------~~-~~~d~lViATG 183 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEY--ILNCPAKVIDN------HTVEAA-G-------KV-FKAKNLILAVG 183 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCE--EESSCCEEEET------TEEEET-T-------EE-EEBSCEEECCC
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCcEE--EEeeEEEEeeC------CEEEEC-C-------EE-EEeCEEEECCC
Confidence 57777777653 33 5566543 54777776642 245554 2 57 89999999999
Q ss_pred CCCCCCCCCCCCccccccCCCCCccEEecCCCC-CCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 147 ETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYK-NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 147 ~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
+.|..|++||.+.. .++++.++. ......+++++|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|.
T Consensus 184 --s~p~~p~i~G~~~~--------~v~~~~~~~~~l~~~~g~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~~ 252 (523)
T 1mo9_A 184 --AGPGTLDVPGVNAK--------GVFDHATLVEELDYEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTE-PLKLI 252 (523)
T ss_dssp --EECCCCCSTTTTSB--------TEEEHHHHHHHCCSCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTTC
T ss_pred --CCCCCCCCCCcccC--------cEeeHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEecC-ccccc
Confidence 78889999987642 255655554 3333445999999999999999999999999999999998 45554
No 30
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.87 E-value=1.7e-22 Score=194.59 Aligned_cols=186 Identities=17% Similarity=0.255 Sum_probs=130.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
.+++|+|||||++||++|..|++. |.+|+|||+++.++ |..+.+ +. .... ........+
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~-------~~~~~l--p~---~~~g-------~~~~~~~~~ 95 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYIS-------FANCGL--PY---YIGG-------VITERQKLL 95 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--HH---HHTT-------SSCCGGGGB
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccCCCC--ch---hhcC-------cCCChHHhh
Confidence 357999999999999999999998 88999999999765 111000 00 0000 001122234
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
..++.++++++++.. +++++|++++.+. +.+.+..... + +... +.+|+||+||| +.|..|++||.+..
T Consensus 96 ~~~~~~~~~~~gi~v--~~~~~V~~id~~~--~~v~v~~~~~--g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~- 163 (588)
T 3ics_A 96 VQTVERMSKRFNLDI--RVLSEVVKINKEE--KTITIKNVTT--N--ETYN-EAYDVLILSPG--AKPIVPSIPGIEEA- 163 (588)
T ss_dssp SSCHHHHHHHTTCEE--ECSEEEEEEETTT--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCCCTTTTTC-
T ss_pred ccCHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEeecCC--C--CEEE-EeCCEEEECCC--CCCCCCCCCCcccC-
Confidence 567788888888664 8999999998754 5554443211 1 2247 89999999999 78888999998543
Q ss_pred cCCCCCccEEecCCCCCCC-------CCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHH
Q 020533 164 SSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~-------~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~ 229 (325)
.+ +++.....+.. ...+++++|||+|.+|+|+|..+++.|.+|+++.|.+ +++|..+..
T Consensus 164 -----~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 229 (588)
T 3ics_A 164 -----KA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIEVTLVEMAN-QVMPPIDYE 229 (588)
T ss_dssp -----TT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHH
T ss_pred -----CC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-cccccCCHH
Confidence 33 44443332211 2357999999999999999999999999999999998 566654333
No 31
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.87 E-value=3.5e-21 Score=179.68 Aligned_cols=176 Identities=15% Similarity=0.228 Sum_probs=120.6
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
+||+|||||++|+++|..|++. |.+|+|||+++.+|..... +...... .+....++..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-----~~~~~~~---------------~~~~~~~~~~ 62 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-----LSAYFNH---------------TINELHEARY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC------------------------------------CC
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-----chhhhcC---------------CCCCHHHhhc
Confidence 5999999999999999999998 8999999999987621100 0000000 0000111111
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+..+.+.++++. ++++++|++++.+. ..|.+.... +..+ +.+|++|+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~gi~--~~~~~~V~~id~~~--~~v~v~~~~------~~~~-~~~d~lviAtG--~~p~~p~i~g~~~---- 125 (452)
T 3oc4_A 63 ITEEELRRQKIQ--LLLNREVVAMDVEN--QLIAWTRKE------EQQW-YSYDKLILATG--ASQFSTQIRGSQT---- 125 (452)
T ss_dssp CCHHHHHHTTEE--EECSCEEEEEETTT--TEEEEEETT------EEEE-EECSEEEECCC--CCBCCCCCBTTTC----
T ss_pred CCHHHHHHCCCE--EEECCEEEEEECCC--CEEEEEecC------ceEE-EEcCEEEECCC--cccCCCCCCCCCC----
Confidence 123334556654 48899999998764 566665211 1267 89999999999 6888899999764
Q ss_pred CCCCccEEecCCCCCCCC-----CCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 166 ATGTGEVIHSTQYKNGKP-----YGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~-----~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
..++++..+.+... ..+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|+
T Consensus 126 ----~~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 185 (452)
T 3oc4_A 126 ----EKLLKYKFLSGALAAVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLE-NLLPK 185 (452)
T ss_dssp ----TTEEEGGGCC----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred ----CCEEEeCCHHHHHHHHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccC-ccccc
Confidence 24555554443322 257999999999999999999999999999999998 45554
No 32
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.87 E-value=5.4e-23 Score=186.71 Aligned_cols=168 Identities=21% Similarity=0.299 Sum_probs=115.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..||+|||||++|+++|..|++.| +|+|+|+++..+ |.....+ .. +. .....+++..+
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~~~l~-------~~---~~---------g~~~~~~~~~~ 65 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSKPMLS-------HY---IA---------GFIPRNRLFPY 65 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCSTTHH-------HH---HT---------TSSCGGGGCSS
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--cccchhH-------HH---Hh---------CCCCHHHhccC
Confidence 469999999999999999999999 999999988643 1100000 00 00 00111122222
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
..++++++++. ++++++|..++... +.|+ .++ .+ +.||+||+||| +.|+.|++||.+.
T Consensus 66 ~~~~~~~~~v~--~~~g~~v~~id~~~----~~V~-~~g-------~~-~~~d~lViATG--s~p~~p~i~G~~~----- 123 (367)
T 1xhc_A 66 SLDWYRKRGIE--IRLAEEAKLIDRGR----KVVI-TEK-------GE-VPYDTLVLATG--ARAREPQIKGKEY----- 123 (367)
T ss_dssp CHHHHHHHTEE--EECSCCEEEEETTT----TEEE-ESS-------CE-EECSEEEECCC--EEECCCCSBTGGG-----
T ss_pred CHHHHHhCCcE--EEECCEEEEEECCC----CEEE-ECC-------cE-EECCEEEECCC--CCCCCCCCCCcCC-----
Confidence 33444566654 48888898887543 5666 432 56 89999999999 7888888988322
Q ss_pred CCCccEEecCCCCCCCCC-----CCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 167 TGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 167 ~~~g~~~~~~~~~~~~~~-----~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
+++.....+...+ ++++++|||+|.+|+|+|..|++.|.+|+++.|.+ +++|
T Consensus 124 -----v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 180 (367)
T 1xhc_A 124 -----LLTLRTIFDADRIKESIENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA-MFLG 180 (367)
T ss_dssp -----EECCCSHHHHHHHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS-CCTT
T ss_pred -----EEEEcCHHHHHHHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC-eecc
Confidence 3443333221111 35899999999999999999999999999999998 5555
No 33
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.87 E-value=7.5e-22 Score=185.20 Aligned_cols=185 Identities=14% Similarity=0.198 Sum_probs=109.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
++||+|||||++|+++|..|++. |.+|+|||+++.++ |.....+. ..... +......++...++.
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~---~~~g~--------~~~~~~~~~~~~~~~ 69 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY---YVSGE--------VSNIESLQATPYNVV 69 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch---hhcCC--------CCchHHhccccchhc
Confidence 36999999999999999999998 89999999998764 11100000 00000 000000111122355
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
.++..+++++++. ++++++|++++.+. ..+.+.... .+ +... +.+|+||+||| +.|..|++||.+.
T Consensus 70 ~~~~~~~~~~gi~--~~~~~~V~~id~~~--~~v~~~~~~--~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~--- 135 (472)
T 3iwa_A 70 RDPEFFRINKDVE--ALVETRAHAIDRAA--HTVEIENLR--TG--ERRT-LKYDKLVLALG--SKANRPPVEGMDL--- 135 (472)
T ss_dssp -----------CE--EECSEEEEEEETTT--TEEEEEETT--TC--CEEE-EECSEEEECCC--EEECCCSCTTTTS---
T ss_pred cCHHHHhhhcCcE--EEECCEEEEEECCC--CEEEEeecC--CC--CEEE-EECCEEEEeCC--CCcCCCCCCCCCC---
Confidence 6667777667755 48999999998754 455444311 11 2257 89999999999 6888889998862
Q ss_pred CCCCCccEEecCCCCCC-------CCCCCCeEEEECcCCCHHHHHHHHhhc-cCeEEEEEecCCeeec
Q 020533 165 SATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSPVHVLS 224 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~-------~~~~~~~v~VvG~G~s~~e~a~~l~~~-~~~v~~~~r~~~~~~p 224 (325)
.+ +++.....+. ....+++++|||+|.+|+|+|..+.+. |.+|+++.|.+ .++|
T Consensus 136 ----~~-v~~~~~~~~~~~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~-~~l~ 197 (472)
T 3iwa_A 136 ----AG-VTPVTNLDEAEFVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELAD-QIMP 197 (472)
T ss_dssp ----BT-EEECCSHHHHHHHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSS-SSST
T ss_pred ----CC-EEEeCCHHHHHHHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccC-cccc
Confidence 22 3333222111 113478999999999999999999999 99999999998 4555
No 34
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.86 E-value=8e-22 Score=185.77 Aligned_cols=178 Identities=20% Similarity=0.291 Sum_probs=120.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC---CCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS---IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g---~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
++||+|||||++|+++|..|++.| .+|+|||+++.++..+.. +........ ..+. ++
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~-----~~~~~~~~~------~~~~---------~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG-----MALWIGEQI------AGPE---------GL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG-----HHHHHTTSS------SCSG---------GG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc-----cchhhcCcc------CCHH---------Hh
Confidence 489999999999999999999988 999999999866532210 000000000 0000 01
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcc---
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLC--- 160 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~--- 160 (325)
...+.+.++++++. ++++++|..++.++ +.+.+.. ++ +..+ +.||+||+||| +.|..|++||.+
T Consensus 95 ~~~~~~~~~~~gv~--v~~~~~v~~i~~~~--~~v~v~~-~g-----~~~~-~~~d~lviAtG--~~p~~p~i~G~~~~~ 161 (490)
T 2bc0_A 95 FYSDKEELESLGAK--VYMESPVQSIDYDA--KTVTALV-DG-----KNHV-ETYDKLIFATG--SQPILPPIKGAEIKE 161 (490)
T ss_dssp BSCCHHHHHHTTCE--EETTCCEEEEETTT--TEEEEEE-TT-----EEEE-EECSEEEECCC--EEECCCSCBTCCBCT
T ss_pred hhcCHHHHHhCCCE--EEeCCEEEEEECCC--CEEEEEe-CC-----cEEE-EECCEEEECCC--CCcCCCCCCCccccc
Confidence 11112334456654 47899999987654 4555542 21 1157 89999999999 778889999986
Q ss_pred ---ccccCCCCCc---cEEecCCCCCC-------CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 161 ---SFCSSATGTG---EVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 161 ---~~~~~~~~~g---~~~~~~~~~~~-------~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
.| .+ .+++...+.+. ....+++|+|||+|.+|+|+|..|++.|.+|+++.|++ .++|
T Consensus 162 ~~~~f------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 231 (490)
T 2bc0_A 162 GSLEF------EATLENLQFVKLYQNSADVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVD-TCLA 231 (490)
T ss_dssp TCTTC------CBSSTTEEECSSHHHHHHHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ccccc------ccccCCEEEeCCHHHHHHHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCeEEEEEccc-chhh
Confidence 33 21 24554332221 11468999999999999999999999999999999998 4555
No 35
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.86 E-value=2.5e-22 Score=185.46 Aligned_cols=170 Identities=21% Similarity=0.241 Sum_probs=116.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCC--eEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~--v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
.++||+|||||++|+++|..|+++|++ |+|+|+++..+.. .. ..++.+. . ......++
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~-------~~--~l~~~~~--~---------~~~~~~~~ 67 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYE-------RP--PLSKEYL--A---------REKTFERI 67 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBC-------SG--GGGTTTT--T---------TSSCSGGG
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcC-------cc--cCCHHHH--c---------CCCCHHHh
Confidence 457999999999999999999999987 9999999865411 00 0000000 0 00011122
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
..+..++.++.++. ++++++|..++... +.|.+.++ .. +.+|+||+||| +.|+.|++||.+..
T Consensus 68 ~~~~~~~~~~~~i~--~~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~~~~~~i~g~~~~- 130 (415)
T 3lxd_A 68 CIRPAQFWEDKAVE--MKLGAEVVSLDPAA----HTVKLGDG-------SA-IEYGKLIWATG--GDPRRLSCVGADLA- 130 (415)
T ss_dssp BSSCHHHHHHTTEE--EEETCCEEEEETTT----TEEEETTS-------CE-EEEEEEEECCC--EECCCCBTTSSCCB-
T ss_pred ccCCHHHHHHCCcE--EEeCCEEEEEECCC----CEEEECCC-------CE-EEeeEEEEccC--CccCCCCCCCcccc-
Confidence 22233445556654 48888999987643 56776654 56 89999999999 77888888887532
Q ss_pred cCCCCCccEEecCCCCCC-----CCCC-CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 164 SSATGTGEVIHSTQYKNG-----KPYG-GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~-----~~~~-~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+ +++.....+. .... +++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 131 ------~-v~~~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 185 (415)
T 3lxd_A 131 ------G-VHAVRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALP 185 (415)
T ss_dssp ------T-EECCCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred ------C-EEEEcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCC
Confidence 2 2221111110 1113 7999999999999999999999999999999998
No 36
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.86 E-value=1.8e-21 Score=179.24 Aligned_cols=175 Identities=23% Similarity=0.276 Sum_probs=115.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFV 78 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (325)
|+.+..++||+|||||++|+++|..|++.|. +|+|+|+++.++ |... ..++.+..-. .++. .
T Consensus 1 M~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~~~~~~~~~~---~~~~--~-- 64 (408)
T 2gqw_A 1 MSQEALKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP-------YDRP--PLSKDFMAHG---DAEK--I-- 64 (408)
T ss_dssp -----CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC-------BCSG--GGGTHHHHHC---CGGG--S--
T ss_pred CCCCCCCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc-------ccCC--CCCHHHhCCC---chhh--h--
Confidence 6665667899999999999999999999998 599999988643 1100 0000000000 0000 0
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCC-C
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-R 157 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~-~ 157 (325)
++. .++++++ .++++++|+.++.+. ++|++.++ .+ +.+|+||+||| +.|..|++ |
T Consensus 65 -------~~~-~~~~~~v--~~~~~~~v~~i~~~~----~~v~~~~g-------~~-~~~d~lviAtG--~~~~~~~i~~ 120 (408)
T 2gqw_A 65 -------RLD-CKRAPEV--EWLLGVTAQSFDPQA----HTVALSDG-------RT-LPYGTLVLATG--AAPRALPTLQ 120 (408)
T ss_dssp -------BCC-CTTSCSC--EEEETCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCGGGT
T ss_pred -------hHH-HHHHCCC--EEEcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCCCCccC
Confidence 001 2233454 458888899887643 66777653 46 89999999999 67888888 8
Q ss_pred CccccccCCCCCccEEecCCCCC-----CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 158 GLCSFCSSATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 158 g~~~~~~~~~~~g~~~~~~~~~~-----~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
|.+ - .+++.....+ .....+++|+|||+|.+|+|+|..|++.|.+|+++.|.+ .++|+
T Consensus 121 G~~-~--------~v~~~~~~~~~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 183 (408)
T 2gqw_A 121 GAT-M--------PVHTLRTLEDARRIQAGLRPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQP-RLMSR 183 (408)
T ss_dssp TCS-S--------CEEECCSHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred CCC-C--------cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-ccccc
Confidence 865 1 1333222211 112347999999999999999999999999999999998 45553
No 37
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=1.3e-21 Score=184.78 Aligned_cols=194 Identities=18% Similarity=0.251 Sum_probs=114.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeec----CCCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|.+|+|||+++ +||+|... +.+...+.. .........+.+... ......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~-~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 78 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR-LGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK--FSFNLP 78 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC-cCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC--CccCHH
Confidence 3799999999999999999999999999999984 89988642 111100000 000000000111100 111222
Q ss_pred HHH-----------HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEee--------cCCCCceeEEEEEeCeEE
Q 020533 82 QFI-----------EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN--------LLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 82 ~~~-----------~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~--------~~~~~~~~~~~~~ad~vI 142 (325)
++. .++.+.+++.++.. +.++. ..++ ...+.+.... ...+ .+ +.||+||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~-~~id----~~~v~v~~~~~~~~~~~~~~~~----~~-~~~d~lV 146 (500)
T 1onf_A 79 LLVERRDKYIQRLNNIYRQNLSKDKVDL--YEGTA-SFLS----ENRILIKGTKDNNNKDNGPLNE----EI-LEGRNIL 146 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCC-CCC-----------------------------------CBSSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEE-EEee----CCEEEEEeccccccccccCCCc----eE-EEeCEEE
Confidence 222 23334445556543 55432 2221 1233333200 0001 56 8999999
Q ss_pred EcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCee
Q 020533 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (325)
Q Consensus 143 iAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~ 222 (325)
+||| +.|..|++||.+. ++++.++..... +++++|||+|.+|+|+|..|++.|.+|+++.|.+ .+
T Consensus 147 iAtG--s~p~~p~i~G~~~----------~~~~~~~~~~~~--~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~ 211 (500)
T 1onf_A 147 IAVG--NKPVFPPVKGIEN----------TISSDEFFNIKE--SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN-RI 211 (500)
T ss_dssp ECCC--CCBCCCSCTTGGG----------CEEHHHHTTCCC--CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS-SS
T ss_pred ECCC--CCCCCCCCCCCCc----------ccCHHHHhccCC--CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCC-cc
Confidence 9999 7788888988743 355555544333 8999999999999999999999999999999998 56
Q ss_pred echhhHHH
Q 020533 223 LSREMVYL 230 (325)
Q Consensus 223 ~p~~~~~~ 230 (325)
+|..+..+
T Consensus 212 l~~~d~~~ 219 (500)
T 1onf_A 212 LRKFDESV 219 (500)
T ss_dssp CTTSCHHH
T ss_pred Ccccchhh
Confidence 66544433
No 38
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.86 E-value=3.6e-22 Score=191.44 Aligned_cols=184 Identities=17% Similarity=0.220 Sum_probs=127.6
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++|+|||||++|+++|..|++. +.+|+|||+++..+ |..+.+ + +.+.. ........+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~-------~~~~~l--~---~~~~~-------~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVS-------FANCGL--P---YHISG-------EIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSS-------BCGGGH--H---HHHTS-------SSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcc-------ccccCc--h---HHhcC-------CcCChHHhhcc
Confidence 5899999999999999999998 78999999998765 111000 0 00000 00112233445
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
++..+++++++.. +++++|++++.+. +.+.+..... + +..+ +.||+||+||| +.|..|++||.+..
T Consensus 63 ~~~~~~~~~~i~~--~~~~~V~~id~~~--~~v~~~~~~~--g--~~~~-~~~d~lviAtG--~~p~~p~ipG~~~~--- 128 (565)
T 3ntd_A 63 TPESFKARFNVEV--RVKHEVVAIDRAA--KLVTVRRLLD--G--SEYQ-ESYDTLLLSPG--AAPIVPPIPGVDNP--- 128 (565)
T ss_dssp CHHHHHHHHCCEE--ETTEEEEEEETTT--TEEEEEETTT--C--CEEE-EECSEEEECCC--EEECCCCCTTCCST---
T ss_pred CHHHHHHhcCcEE--EECCEEEEEECCC--CEEEEEecCC--C--CeEE-EECCEEEECCC--CCCCCCCCCCCCCC---
Confidence 6677777788654 8999999998754 5554443211 1 2257 89999999999 68888999998643
Q ss_pred CCCCccEEecCCCCCC-------CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHH
Q 020533 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~-------~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~ 230 (325)
.+++.....+. ....+++|+|||+|.+|+|+|..+++.|.+|+++.|++ .++|..+..+
T Consensus 129 -----~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~~ 194 (565)
T 3ntd_A 129 -----LTHSLRNIPDMDRILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIKTTLLELAD-QVMTPVDREM 194 (565)
T ss_dssp -----TEECCSSHHHHHHHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSCTTSCHHH
T ss_pred -----CEEEeCCHHHHHHHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCC-ccchhcCHHH
Confidence 23333322111 11357899999999999999999999999999999998 6666544443
No 39
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.86 E-value=3.5e-21 Score=180.59 Aligned_cols=201 Identities=10% Similarity=0.118 Sum_probs=128.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecCC----C----c--cCCCCCCCCCC
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLAK----Q----F--CQLPHLPFPSS 73 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~~----~----~--~~~~~~~~~~~ 73 (325)
..++||+|||||++|+++|..|++.|++|+|||+++.+||+|.... .+...+.... . . +.++......+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~ 83 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNVEID 83 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCEEEC
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCCccC
Confidence 3468999999999999999999999999999999999999885321 1100000000 0 0 00000000000
Q ss_pred CCCCC-CH----HHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 74 YPMFV-SR----AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 74 ~~~~~-~~----~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
+..+. .. ..+.+++.+.+++.++. +++++.+. + +. +.|.|.+.++. ... +.+|+||+|||
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-~--~~--~~~~v~~~~G~-----~~~-i~~d~lIiAtG-- 148 (470)
T 1dxl_A 84 LAAMMGQKDKAVSNLTRGIEGLFKKNKVT--YVKGYGKF-V--SP--SEISVDTIEGE-----NTV-VKGKHIIIATG-- 148 (470)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCE--EEESCEEE-E--ET--TEEEECCSSSC-----CEE-EECSEEEECCC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEeEEEE-e--cC--CEEEEEeCCCc-----eEE-EEcCEEEECCC--
Confidence 00000 01 12333345566666754 47777553 3 22 45777654331 156 89999999999
Q ss_pred CCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 149 TNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 149 ~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
+.|..|+++|.+.. .++++.+..... ..+++++|||+|.+|+|+|..|++.|.+|+++.|++ .++|..+.
T Consensus 149 s~p~~p~~~g~~~~--------~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~ 218 (470)
T 1dxl_A 149 SDVKSLPGVTIDEK--------KIVSSTGALALS-EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFAS-EIVPTMDA 218 (470)
T ss_dssp EEECCBTTBCCCSS--------SEECHHHHTTCS-SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTTSCH
T ss_pred CCCCCCCCCCCCcc--------cEEeHHHhhhhh-hcCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-cccccccH
Confidence 67888888886531 356655444322 257999999999999999999999999999999998 56665444
Q ss_pred HH
Q 020533 229 YL 230 (325)
Q Consensus 229 ~~ 230 (325)
.+
T Consensus 219 ~~ 220 (470)
T 1dxl_A 219 EI 220 (470)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 40
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.85 E-value=3.7e-22 Score=188.20 Aligned_cols=198 Identities=17% Similarity=0.181 Sum_probs=121.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCCCcc-----CCCCCCCCCCCCCCCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQFC-----QLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 80 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|... +++...+..+...+ .+..+..... ......
T Consensus 25 ~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 103 (491)
T 3urh_A 25 AYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA-NPKLNL 103 (491)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC-CCEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC-CCccCH
Confidence 4899999999999999999999999999999999999987642 12211110000000 0111111000 001122
Q ss_pred HHHHHH-----------HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 81 AQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 81 ~~~~~y-----------l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
..+.++ +....+..++.. ..+. ...+ +.+.+.|...++ +..+ +.+|+||+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g-----~~~~-~~~d~lViATG--s 168 (491)
T 3urh_A 104 QKMMAHKDATVKSNVDGVSFLFKKNKIDG--FQGT-GKVL----GQGKVSVTNEKG-----EEQV-LEAKNVVIATG--S 168 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEEC----SSSEEEEECTTS-----CEEE-EECSEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEE-EEEe----cCCEEEEEeCCC-----ceEE-EEeCEEEEccC--C
Confidence 222222 233344445432 3333 2222 234555654332 2257 89999999999 4
Q ss_pred CCCCCCCCCccc-cccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 150 NPFTPDIRGLCS-FCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 150 ~p~~p~~~g~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
.| |.+||.+. + .+..+++..........+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++|..+.
T Consensus 169 ~p--~~ipg~~~~~------~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~ 239 (491)
T 3urh_A 169 DV--AGIPGVEVAF------DEKTIVSSTGALALEKVPASMIVVGGGVIGLELGSVWARLGAKVTVVEFLD-TILGGMDG 239 (491)
T ss_dssp EC--CCBTTBCCCC------CSSSEECHHHHTSCSSCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSSSSCH
T ss_pred CC--CCCCCccccc------CCeeEEehhHhhhhhhcCCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccc-cccccCCH
Confidence 44 45777753 3 444455444433445568999999999999999999999999999999998 56665443
Q ss_pred H
Q 020533 229 Y 229 (325)
Q Consensus 229 ~ 229 (325)
+
T Consensus 240 ~ 240 (491)
T 3urh_A 240 E 240 (491)
T ss_dssp H
T ss_pred H
Confidence 3
No 41
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.85 E-value=2e-22 Score=185.71 Aligned_cols=171 Identities=18% Similarity=0.217 Sum_probs=116.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCC--eEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIP--YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~--v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++|+|||||++|+++|..|+++|++ |+|||+++..+. .... .++.+... ...++.. +
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y-------~~~~--l~~~~~~g--~~~~~~~--~-------- 61 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY-------DRPS--LSKAVLDG--SLERPPI--L-------- 61 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB-------CSGG--GGTHHHHT--SSSSCCB--S--------
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc-------CCcc--ccHHHhCC--CCCHHHh--c--------
Confidence 4899999999999999999999987 999999987541 1000 00000000 0000000 0
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+..++.++.++. ++++++|+.++... +.|.+.++ .+ +.+|+||+||| +.|+.|++||.+.
T Consensus 62 ~~~~~~~~~~i~--~~~~~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~ipG~~~---- 121 (410)
T 3ef6_A 62 AEADWYGEARID--MLTGPEVTALDVQT----RTISLDDG-------TT-LSADAIVIATG--SRARTMALPGSQL---- 121 (410)
T ss_dssp SCTTHHHHTTCE--EEESCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred CCHHHHHHCCCE--EEeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEccC--CcccCCCCCCccc----
Confidence 011223445654 48999999997653 46776654 56 89999999999 6788888998752
Q ss_pred CCCCccEEecCCCCCC-----CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 166 ATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~-----~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
..+++.....+. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|
T Consensus 122 ----~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~ 180 (410)
T 3ef6_A 122 ----PGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTARKLGLSVTILEAGD-ELLV 180 (410)
T ss_dssp ----TTEECCCSHHHHHHHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSH
T ss_pred ----cceEEeccHHHHHHHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-ccch
Confidence 223332222111 12358999999999999999999999999999999998 3444
No 42
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.85 E-value=4.6e-21 Score=178.68 Aligned_cols=174 Identities=20% Similarity=0.323 Sum_probs=116.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
++||+|||||++|+++|..|++. +.+|+|||+++.+++... ..+. .........++.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~---------~~p~------------~~~~~~~~~~~~ 61 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC---------GIPY------------VVEGLSTPDKLM 61 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC-----------------------------------------
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc---------CCcc------------ccCCCCCHHHhh
Confidence 46999999999999999999998 789999999987652210 0000 001111222333
Q ss_pred HHH-HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 85 EHL-DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 85 ~yl-~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
.+. ..+++++++. ++++++|++++.+ .+.|...++ ..+ +.+|+||+||| +.|..|++||.+.
T Consensus 62 ~~~~~~~~~~~gi~--v~~~~~v~~i~~~----~~~v~~~~g------~~~-~~~d~lviAtG--~~p~~p~i~G~~~-- 124 (449)
T 3kd9_A 62 YYPPEVFIKKRGID--LHLNAEVIEVDTG----YVRVRENGG------EKS-YEWDYLVFANG--ASPQVPAIEGVNL-- 124 (449)
T ss_dssp ----CTHHHHTTCE--EETTCEEEEECSS----EEEEECSSS------EEE-EECSEEEECCC--EEECCCSCBTTTS--
T ss_pred hcCHHHHHHhcCcE--EEecCEEEEEecC----CCEEEECCc------eEE-EEcCEEEECCC--CCCCCCCCCCCCC--
Confidence 333 3344677765 4899999988643 367765432 147 89999999999 7788889998754
Q ss_pred cCCCCCccEEecCCCCC-------CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 164 SSATGTGEVIHSTQYKN-------GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~-------~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
.+ ++......+ ...+.+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|+
T Consensus 125 -----~~-v~~~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~ 186 (449)
T 3kd9_A 125 -----KG-VFTADLPPDALAIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGE-RVLRR 186 (449)
T ss_dssp -----TT-EECSCSTHHHHHHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTTT
T ss_pred -----CC-EEEeCCHHHHHHHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchh
Confidence 12 232221111 123468999999999999999999999999999999998 45554
No 43
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.85 E-value=8.1e-23 Score=186.56 Aligned_cols=172 Identities=17% Similarity=0.214 Sum_probs=122.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
.+.+|+|||||++|+++|..|...+.+|+|||+++..+ |.... .+..+ ....+.+++..
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~-------y~~~~--l~~~l------------~g~~~~~~l~~ 66 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLP-------YYRPR--LNEII------------AKNKSIDDILI 66 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCC-------BCGGG--HHHHH------------HSCCCGGGTBS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCC-------cccCh--hhHHH------------cCCCCHHHccC
Confidence 45789999999999999999977889999999998755 21110 00000 00111122333
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+..++++++++. ++++++|++++.+. .+|++.++ .+ +.||+||+||| +.|+.|++||.+.
T Consensus 67 ~~~~~~~~~~i~--~~~~~~V~~id~~~----~~v~~~~g-------~~-~~yd~lvlAtG--~~p~~p~i~G~~~---- 126 (385)
T 3klj_A 67 KKNDWYEKNNIK--VITSEFATSIDPNN----KLVTLKSG-------EK-IKYEKLIIASG--SIANKIKVPHADE---- 126 (385)
T ss_dssp SCHHHHHHTTCE--EECSCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCCCTTCSC----
T ss_pred CCHHHHHHCCCE--EEeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEecC--CCcCCCCCCCCCC----
Confidence 344555667755 48999999998754 35666654 56 89999999999 7888888888642
Q ss_pred CCCCccEEecCCCCCCCCC-----CCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 166 ATGTGEVIHSTQYKNGKPY-----GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~~~-----~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
+++...+.+...+ .+++|+|||+|.+|+|+|..|++.|.+||++.|++ +++|+
T Consensus 127 ------v~~~~~~~d~~~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~-~~l~~ 184 (385)
T 3klj_A 127 ------IFSLYSYDDALKIKDECKNKGKAFIIGGGILGIELAQAIIDSGTPASIGIILE-YPLER 184 (385)
T ss_dssp ------EECCSSHHHHHHHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSS-SSCTT
T ss_pred ------eEEeCCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCC-ccchh
Confidence 3333333221112 27899999999999999999999999999999999 66665
No 44
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.85 E-value=4.5e-21 Score=180.75 Aligned_cols=200 Identities=16% Similarity=0.159 Sum_probs=123.2
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEe--------cCCCCCCccCCC-CCCceEeecCCC----ccCCCCCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPS 72 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e--------~~~~~Gg~w~~~-~y~~~~~~~~~~----~~~~~~~~~~~ 72 (325)
++||+|||||++|+++|..|++ .|.+|+||| +.+.+||+|... ++|...+..... ......+.+..
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~ 86 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFGWEF 86 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcCccc
Confidence 5799999999999999999999 999999999 356789988642 122110000000 00001111100
Q ss_pred CCC-CCCCHHHHHHHHHHHH-----------HHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCC-CceeEEEEEe
Q 020533 73 SYP-MFVSRAQFIEHLDHYV-----------SHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSP-GREIEEYYSG 138 (325)
Q Consensus 73 ~~~-~~~~~~~~~~yl~~~a-----------~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~-~~~~~~~~~a 138 (325)
... ......++.++..++. ++. ++. ++.++ +..++ . ++|.+.+.... ...... +.|
T Consensus 87 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~-~~~i~--~----~~v~v~~~~~~~~~~~~~-~~~ 156 (495)
T 2wpf_A 87 DGSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGLD--FFLGW-GSLES--K----NVVVVRETADPKSAVKER-LQA 156 (495)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTEE--EEESE-EEEEE--T----TEEEEESSSSTTSCEEEE-EEE
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE--EEEeE-EEEee--C----CEEEEeecCCccCCCCeE-EEc
Confidence 000 0123345555444333 333 433 24443 44442 1 45666521110 000157 899
Q ss_pred CeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhc---cCeEEEE
Q 020533 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTSLV 215 (325)
Q Consensus 139 d~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~---~~~v~~~ 215 (325)
|+||+||| +.|..|++||.+. ++++.++... ...+++++|||+|.+|+|+|..|++. |.+|+++
T Consensus 157 d~lViATG--s~p~~p~i~G~~~----------~~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv 223 (495)
T 2wpf_A 157 DHILLATG--SWPQMPAIPGIEH----------CISSNEAFYL-PEPPRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLC 223 (495)
T ss_dssp EEEEECCC--EEECCCCCTTGGG----------CEEHHHHTTC-SSCCSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CEEEEeCC--CCcCCCCCCCccc----------cccHHHHHhh-hhcCCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEE
Confidence 99999999 7788888988743 2444444332 23478999999999999999999999 9999999
Q ss_pred EecCCeeechhhHHH
Q 020533 216 VRSPVHVLSREMVYL 230 (325)
Q Consensus 216 ~r~~~~~~p~~~~~~ 230 (325)
.|.+ .++|..+.++
T Consensus 224 ~~~~-~~l~~~d~~~ 237 (495)
T 2wpf_A 224 YRNN-LILRGFDETI 237 (495)
T ss_dssp ESSS-SSCTTSCHHH
T ss_pred EcCC-ccccccCHHH
Confidence 9998 5666544433
No 45
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.85 E-value=4.5e-21 Score=180.01 Aligned_cols=193 Identities=13% Similarity=0.107 Sum_probs=125.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecCCC----cc--CCCCCCCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLAKQ----FC--QLPHLPFPSSYPMFV 78 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~~~----~~--~~~~~~~~~~~~~~~ 78 (325)
.++||+|||||++|+++|..|++.|++|+|||+++.+||+|.... .+...+..... +. .+..+.++.. ....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~-~~~~ 83 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS-EVRL 83 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES-CEEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC-CCcc
Confidence 357999999999999999999999999999999999999885421 11100000000 00 0000000000 0011
Q ss_pred CHHHHHH-----------HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 79 SRAQFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 79 ~~~~~~~-----------yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+..++.. .+.+.+++.++.. +.++. ..+ + .+.|.|.+.++. . .+ +.||+||+|||
T Consensus 84 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~-~~~--~--~~~~~v~~~~gg----~-~~-~~~d~lViAtG- 149 (474)
T 1zmd_A 84 NLDKMMEQKSTAVKALTGGIAHLFKQNKVVH--VNGYG-KIT--G--KNQVTATKADGG----T-QV-IDTKNILIATG- 149 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESEE-EEE--E--TTEEEEECTTSC----E-EE-EEEEEEEECCC-
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEE-EEe--c--CCEEEEEecCCC----c-EE-EEeCEEEECCC-
Confidence 2223322 2345556666543 66654 333 2 255777654311 1 56 89999999999
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
+.|..|+++|.+.. .++++.+...... .+++++|||+|.+|+|+|..+++.|.+|+++.|++ .++|
T Consensus 150 -s~p~~p~i~g~~~~--------~v~t~~~~~~~~~-~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 215 (474)
T 1zmd_A 150 -SEVTPFPGITIDED--------TIVSSTGALSLKK-VPEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLG-HVGG 215 (474)
T ss_dssp -EEECCCTTCCCCSS--------SEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSC
T ss_pred -CCCCCCCCCCCCcC--------cEEcHHHHhhccc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEeccC-ccCC
Confidence 67888888887532 3566665544322 46999999999999999999999999999999998 5666
No 46
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.85 E-value=3.5e-21 Score=180.89 Aligned_cols=202 Identities=17% Similarity=0.244 Sum_probs=121.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCCCCCCCC--
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSS-- 73 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~~~~~~~-- 73 (325)
|+.+..++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.+...+... ........+.+...
T Consensus 5 m~~~~~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~ 83 (479)
T 2hqm_A 5 MSTNTKHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLP 83 (479)
T ss_dssp -----CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSC
T ss_pred ccCccccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCcccccc
Confidence 444445689999999999999999999999999999998 689988632 1111000000 00000011111000
Q ss_pred --C-CCCCCHHHHHHH-----------HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeC
Q 020533 74 --Y-PMFVSRAQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (325)
Q Consensus 74 --~-~~~~~~~~~~~y-----------l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (325)
. .......++.++ +...++..++. +..+ ++..+ + ...+.|...++ +..+ +.+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~--~~~g-~~~~i--~--~~~~~v~~~~g-----~~~~-~~~d 150 (479)
T 2hqm_A 84 LDKEHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVD--VVFG-WARFN--K--DGNVEVQKRDN-----TTEV-YSAN 150 (479)
T ss_dssp CSGGGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEE--EEEE-EEEEC--T--TSCEEEEESSS-----CCEE-EEEE
T ss_pred cccccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEe-EEEEe--e--CCEEEEEeCCC-----cEEE-EEeC
Confidence 0 011223333332 23334444543 2443 34433 2 24566665443 1147 8999
Q ss_pred eEEEcccCCCCCCCC-CCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEec
Q 020533 140 FLVVASGETTNPFTP-DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (325)
Q Consensus 140 ~vIiAtG~~~~p~~p-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~ 218 (325)
+||+||| +.|..| ++||.+.. +++.++.. ....+++++|||+|.+|+|+|..+++.|.+|+++.|.
T Consensus 151 ~lviAtG--s~p~~p~~i~g~~~~----------~~~~~~~~-l~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~ 217 (479)
T 2hqm_A 151 HILVATG--GKAIFPENIPGFELG----------TDSDGFFR-LEEQPKKVVVVGAGYIGIELAGVFHGLGSETHLVIRG 217 (479)
T ss_dssp EEEECCC--EEECCCTTSTTGGGS----------BCHHHHHH-CSSCCSEEEEECSSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred EEEEcCC--CCCCCCCCCCCcccc----------cchHHHhc-ccccCCeEEEECCCHHHHHHHHHHHHcCCceEEEEeC
Confidence 9999999 778888 88887432 22222221 1234789999999999999999999999999999999
Q ss_pred CCeeechhhHHH
Q 020533 219 PVHVLSREMVYL 230 (325)
Q Consensus 219 ~~~~~p~~~~~~ 230 (325)
+ .++|..+..+
T Consensus 218 ~-~~l~~~d~~~ 228 (479)
T 2hqm_A 218 E-TVLRKFDECI 228 (479)
T ss_dssp S-SSCTTSCHHH
T ss_pred C-ccccccCHHH
Confidence 8 5666544433
No 47
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.85 E-value=1e-20 Score=177.25 Aligned_cols=198 Identities=14% Similarity=0.129 Sum_probs=125.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCCC----ccC-CCCCCCCCCCCCCCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQ-LPHLPFPSSYPMFVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~ 80 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|... +.+...+..... +.. +..+..+.........
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 81 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGVTMDS 81 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGCEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 4799999999999999999999999999999999999988632 111100000000 000 0000000000001112
Q ss_pred HHH-----------HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 81 AQF-----------IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 81 ~~~-----------~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.++ ...+.+.+++.++.. +.++.+ .++ . +.+.|...++ +..+ +.+|+||+||| +
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i~--~--~~~~v~~~~G-----~~~~-~~~d~lviAtG--~ 146 (468)
T 2qae_A 82 AKMQQQKERAVKGLTGGVEYLFKKNKVTY--YKGEGS-FET--A--HSIRVNGLDG-----KQEM-LETKKTIIATG--S 146 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EEEEEE-EEE--T--TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEEEEE-Eee--C--CEEEEEecCC-----ceEE-EEcCEEEECCC--C
Confidence 222 223345556666543 665543 332 2 4566665433 1256 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHH
Q 020533 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (325)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~ 229 (325)
.|..|+++|.+. . .++++.+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+..
T Consensus 147 ~p~~p~~~g~~~-------~-~v~t~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~ 216 (468)
T 2qae_A 147 EPTELPFLPFDE-------K-VVLSSTGALAL-PRVPKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAP-RCAPTLDED 216 (468)
T ss_dssp EECCBTTBCCCS-------S-SEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CcCCCCCCCCCc-------C-ceechHHHhhc-ccCCceEEEECCCHHHHHHHHHHHHhCCEEEEEecCC-cccccCCHH
Confidence 788888888653 1 35555544332 2257999999999999999999999999999999998 566654433
No 48
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.84 E-value=5e-21 Score=174.90 Aligned_cols=172 Identities=17% Similarity=0.242 Sum_probs=121.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
++||+|||||++|+++|..|++.|. +|+++|+++ |..|....++ . .........++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~~l~-----------~--------~~~~~~~~~~~~ 62 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKPMLS-----------T--------GFSKNKDADGLA 62 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGGGGG-----------G--------TTTTTCCHHHHE
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCccccc-----------H--------HHhCCCCHHHhh
Confidence 4799999999999999999999984 689999886 3333211000 0 001112233443
Q ss_pred H-HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 85 E-HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 85 ~-yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
. ++.++++++++. ++++++|..++.+. ++|.+.+ .+ +.+|+||+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~~~~v~--~~~~~~v~~i~~~~----~~v~~~~--------~~-~~~d~lviAtG--~~p~~p~i~g~~~-- 123 (384)
T 2v3a_A 63 MAEPGAMAEQLNAR--ILTHTRVTGIDPGH----QRIWIGE--------EE-VRYRDLVLAWG--AEPIRVPVEGDAQ-- 123 (384)
T ss_dssp EECHHHHHHHTTCE--EECSCCCCEEEGGG----TEEEETT--------EE-EECSEEEECCC--EEECCCCCBSTTT--
T ss_pred ccCHHHHHHhCCcE--EEeCCEEEEEECCC----CEEEECC--------cE-EECCEEEEeCC--CCcCCCCCCCcCc--
Confidence 2 556667777765 37788888887643 4566643 56 89999999999 7788888888652
Q ss_pred cCCCCCccEEecCCCCCC-----CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 164 SSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~-----~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
..++++..+.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++|+
T Consensus 124 ------~~v~~~~~~~~~~~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~~~~ 183 (384)
T 2v3a_A 124 ------DALYPINDLEDYARFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCE-QVMPG 183 (384)
T ss_dssp ------TCEEECSSHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTT
T ss_pred ------CCEEEECCHHHHHHHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCc-chhhc
Confidence 235555443221 11247999999999999999999999999999999988 45553
No 49
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.84 E-value=5.5e-20 Score=172.89 Aligned_cols=198 Identities=13% Similarity=0.085 Sum_probs=122.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+... ..+..+..+..+.. .......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~-~~~~~~~ 84 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP-EPELDID 84 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC-CCCCCHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC-CCccCHH
Confidence 5799999999999999999999999999999998999887532 1111000000 00000000000000 0112222
Q ss_pred HHHH-----------HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecC-------CCCceeEEEEEeCeEEE
Q 020533 82 QFIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLL-------SPGREIEEYYSGRFLVV 143 (325)
Q Consensus 82 ~~~~-----------yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~-------~~~~~~~~~~~ad~vIi 143 (325)
.+.. .+...+++.++.. +.++.+. + + .+.+.|...++. ++ +..+ +.+|+||+
T Consensus 85 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~--~--~~~v~v~~~~g~~~~~~~~~g--~~~~-i~ad~lVi 154 (482)
T 1ojt_A 85 MLRAYKDGVVSRLTGGLAGMAKSRKVDV--IQGDGQF-L--D--PHHLEVSLTAGDAYEQAAPTG--EKKI-VAFKNCII 154 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EEEEEEE-E--E--TTEEEEEEEEEEETTEEEEEE--EEEE-EEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EeeEEEE-c--c--CCEEEEEecCCcccccccccC--cceE-EEcCEEEE
Confidence 3322 2344556666543 6665443 2 2 255666644320 00 2256 89999999
Q ss_pred cccCCCCCCCCC-CCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCee
Q 020533 144 ASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (325)
Q Consensus 144 AtG~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~ 222 (325)
||| +.|..|+ ++ . ...++++.+..... ..+++++|||+|.+|+|+|..|++.|.+|+++.|++ .+
T Consensus 155 AtG--s~p~~~~~i~-~---------~~~v~~~~~~~~~~-~~~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~~ 220 (482)
T 1ojt_A 155 AAG--SRVTKLPFIP-E---------DPRIIDSSGALALK-EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD-GL 220 (482)
T ss_dssp CCC--EEECCCSSCC-C---------CTTEECHHHHTTCC-CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS-SS
T ss_pred CCC--CCCCCCCCCC-c---------cCcEEcHHHHhccc-ccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cc
Confidence 999 5576665 44 2 22355555444322 247999999999999999999999999999999998 56
Q ss_pred echhhHH
Q 020533 223 LSREMVY 229 (325)
Q Consensus 223 ~p~~~~~ 229 (325)
+|..+.+
T Consensus 221 l~~~~~~ 227 (482)
T 1ojt_A 221 MQGADRD 227 (482)
T ss_dssp STTSCHH
T ss_pred ccccCHH
Confidence 6654433
No 50
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.84 E-value=2.4e-21 Score=178.18 Aligned_cols=167 Identities=19% Similarity=0.254 Sum_probs=112.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++|+|||||++|+++|..|++.|+ +|+|||+++..+ |... ..++.+..... .+. ++..
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~-------y~~~--~l~~~~l~~~~--~~~---------~~~~ 61 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLP-------YQRP--PLSKAYLKSGG--DPN---------SLMF 61 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSS-------BCSG--GGGTGGGGSCC--CTT---------SSBS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCC-------CCCc--cCCHHHHCCCC--CHH---------HccC
Confidence 689999999999999999999998 899999998643 1110 00111110000 000 1111
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+..++..+.++.. +. ++|++++.+. ..|.+.++ .. +.+|+||+||| +.|+.|++||.+.
T Consensus 62 ~~~~~~~~~~i~~--~~-~~v~~id~~~----~~v~~~~g-------~~-~~~d~lvlAtG--~~p~~~~i~g~~~---- 120 (404)
T 3fg2_P 62 RPEKFFQDQAIEL--IS-DRMVSIDREG----RKLLLASG-------TA-IEYGHLVLATG--ARNRMLDVPNASL---- 120 (404)
T ss_dssp SCHHHHHHTTEEE--EC-CCEEEEETTT----TEEEESSS-------CE-EECSEEEECCC--EEECCCCSTTTTS----
T ss_pred CCHHHHHhCCCEE--EE-EEEEEEECCC----CEEEECCC-------CE-EECCEEEEeeC--CCccCCCCCCCCC----
Confidence 1223344556543 66 8888887653 35666654 56 89999999999 6788888888653
Q ss_pred CCCCccEEecCCCCC-----CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 166 ATGTGEVIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~-----~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
. .+++.....+ .....+++++|||+|.+|+|+|..+.+.|.+|+++.+.+
T Consensus 121 ---~-~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~ 175 (404)
T 3fg2_P 121 ---P-DVLYLRTLDESEVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLEVDVVELAP 175 (404)
T ss_dssp ---T-TEECCSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred ---C-cEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCC
Confidence 1 2332221111 112357999999999999999999999999999999998
No 51
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.84 E-value=7e-21 Score=178.25 Aligned_cols=195 Identities=13% Similarity=0.120 Sum_probs=126.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCC----CccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|... +.+...+.... ....++.. .......
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~------~~~~~~~ 77 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV------KIPLDFS 77 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS------CCCCCHH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC------CCCcCHH
Confidence 4799999999999999999999999999999999999998742 11110000000 00000000 1112223
Q ss_pred HHHHHH------------HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 82 QFIEHL------------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 82 ~~~~yl------------~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.+.++. ...+++.++. ....++..++. +.+.|...++ +..+ +.+|+||+||| +
T Consensus 78 ~~~~~~~~~~~l~~~~~~~~~~~~~~v~---~~~g~v~~id~----~~~~V~~~~g-----~~~~-~~~d~lviAtG--~ 142 (466)
T 3l8k_A 78 TVQDRKDYVQELRFKQHKRNMSQYETLT---FYKGYVKIKDP----THVIVKTDEG-----KEIE-AETRYMIIASG--A 142 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCTTEE---EESEEEEEEET----TEEEEEETTS-----CEEE-EEEEEEEECCC--E
T ss_pred HHHHHHHhheeccccchHHHHHHhCCCE---EEEeEEEEecC----CeEEEEcCCC-----cEEE-EecCEEEECCC--C
Confidence 333222 2222333332 23335655542 4577766543 2256 88999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCccEEecCCCC---CCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechh
Q 020533 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYK---NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (325)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~ 226 (325)
.|..|++||.+.+ +++.++. +.....+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|..
T Consensus 143 ~p~~p~i~G~~~~----------~t~~~~~~~~~~l~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~ 211 (466)
T 3l8k_A 143 ETAKLRLPGVEYC----------LTSDDIFGYKTSFRKLPQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLD-RALITL 211 (466)
T ss_dssp EECCCCCTTGGGS----------BCHHHHHSTTCSCCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTS
T ss_pred CccCCCCCCccce----------EeHHHHHHHHHHHhhCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-cCCCCC
Confidence 8888999987633 2222221 1223357999999999999999999999999999999998 577765
Q ss_pred -hHHHHHH
Q 020533 227 -MVYLGVV 233 (325)
Q Consensus 227 -~~~~~~~ 233 (325)
+.++...
T Consensus 212 ~d~~~~~~ 219 (466)
T 3l8k_A 212 EDQDIVNT 219 (466)
T ss_dssp CCHHHHHH
T ss_pred CCHHHHHH
Confidence 5554443
No 52
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.84 E-value=2.2e-20 Score=176.43 Aligned_cols=202 Identities=16% Similarity=0.150 Sum_probs=128.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCCCCCCC-CCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPS-SYPMF 77 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~---g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~~~~~~-~~~~~ 77 (325)
++||+|||||++|+++|..|++. |.+|+|||+++ +||+|... +.+...+... .....+..+.++. .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 37999999999999999999999 99999999998 99987532 1111000000 0000111111110 00011
Q ss_pred CCHHHH-----------HHHHHHHHHHcCCCceeeeCeEEEEEEEcC--CCCcEEEEEeecCCCCceeEEEEEeCeEEEc
Q 020533 78 VSRAQF-----------IEHLDHYVSHFNIGPSIRYQRSVESASYDE--ATNMWNVKASNLLSPGREIEEYYSGRFLVVA 144 (325)
Q Consensus 78 ~~~~~~-----------~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~--~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiA 144 (325)
.+..++ ..++.+.++++++.. +.++ +..++... ..+.+.|...++ +... +.+|++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~~~~~~~~~~~~V~~~~g-----~~~~-~~~d~lviA 151 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGVQV--IAGR-GELIDSTPGLARHRIKATAADG-----STSE-HEADVVLVA 151 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESE-EEECCSSSCCSSEEEEEECTTS-----CEEE-EEESEEEEC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEecCcccCCCCEEEEEeCCC-----cEEE-EEeCEEEEc
Confidence 223333 333556666777553 6665 55554310 013455554332 1136 899999999
Q ss_pred ccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 145 SGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 145 tG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
|| +.|..|+++|.+.. .++++.+.... ...+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|
T Consensus 152 TG--s~p~~p~i~g~~~~--------~v~~~~~~~~~-~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~ 219 (499)
T 1xdi_A 152 TG--ASPRILPSAQPDGE--------RILTWRQLYDL-DALPDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQD-HVLP 219 (499)
T ss_dssp CC--EEECCCGGGCCCSS--------SEEEGGGGGGC-SSCCSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSS-SSSC
T ss_pred CC--CCCCCCCCCCCCcC--------cEEehhHhhhh-hccCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-cccc
Confidence 99 77888888887642 35665555442 2346899999999999999999999999999999998 5666
Q ss_pred hhhHHH
Q 020533 225 REMVYL 230 (325)
Q Consensus 225 ~~~~~~ 230 (325)
..+..+
T Consensus 220 ~~d~~~ 225 (499)
T 1xdi_A 220 YEDADA 225 (499)
T ss_dssp CSSHHH
T ss_pred ccCHHH
Confidence 544433
No 53
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.84 E-value=1.3e-20 Score=176.19 Aligned_cols=187 Identities=18% Similarity=0.246 Sum_probs=116.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCCC----ccCCCCCCCCCCCCCCCCH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 80 (325)
.++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.+...+..... ......+.+... ......
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~ 80 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS-GGTLDW 80 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC----CCH
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC-CCCcCH
Confidence 3589999999999999999999999999999998 689988632 111100000000 000000011000 011233
Q ss_pred HHHHHHHH-----------HHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 81 AQFIEHLD-----------HYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 81 ~~~~~yl~-----------~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.++.++.. ..+++.++.. +.++ +..++ . ++|++ ++ .+ +.+|+||+||| +
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~i~--~----~~v~~-~g-------~~-~~~d~lviAtG--s 140 (463)
T 2r9z_A 81 PRLVAGRDRYIGAINSFWDGYVERLGITR--VDGH-ARFVD--A----HTIEV-EG-------QR-LSADHIVIATG--G 140 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-EEEEE--T----TEEEE-TT-------EE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCEE--EEeE-EEEcc--C----CEEEE-CC-------EE-EEcCEEEECCC--C
Confidence 34443333 2334455443 5543 33332 1 34655 22 56 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechh
Q 020533 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSRE 226 (325)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~ 226 (325)
.|..|++||.+.. +++.++... ...+++++|||+|.+|+|+|..|++.|.+|+++.|++ .++|..
T Consensus 141 ~p~~p~i~G~~~~----------~~~~~~~~~-~~~~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~-~~l~~~ 205 (463)
T 2r9z_A 141 RPIVPRLPGAELG----------ITSDGFFAL-QQQPKRVAIIGAGYIGIELAGLLRSFGSEVTVVALED-RLLFQF 205 (463)
T ss_dssp EECCCSCTTGGGS----------BCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTS
T ss_pred CCCCCCCCCccce----------ecHHHHhhh-hccCCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCC-cccccc
Confidence 7888889887432 233222221 1246899999999999999999999999999999998 455543
No 54
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.84 E-value=2.1e-20 Score=174.98 Aligned_cols=189 Identities=15% Similarity=0.157 Sum_probs=119.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecCCCc----cCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLAKQF----CQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|.+|+|||+++ +||+|.... .|...+...... .....+.++. .......
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~--~~~~~~~ 82 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA--KPELDLK 82 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC--CCEECHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC--CCCcCHH
Confidence 5799999999999999999999999999999988 899885321 111000000000 0000000000 0011222
Q ss_pred HHH-------HH----HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 82 QFI-------EH----LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 82 ~~~-------~y----l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
++. ++ +.+.+++.++.. +.++.+. ++ . ++|++. + .+ +.||+||+||| +.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~gv~~--~~g~~~~-~~--~----~~v~v~-g-------~~-~~~d~lViATG--s~ 142 (464)
T 2eq6_A 83 KLGGWRDQVVKKLTGGVGTLLKGNGVEL--LRGFARL-VG--P----KEVEVG-G-------ER-YGAKSLILATG--SE 142 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESCEEE-EE--T----TEEEET-T-------EE-EEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EeeeEEE-cc--C----CEEEEc-c-------EE-EEeCEEEEcCC--CC
Confidence 222 22 234455566543 6665432 32 2 245444 2 56 89999999999 67
Q ss_pred CCCCC-CCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHH
Q 020533 151 PFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (325)
Q Consensus 151 p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~ 229 (325)
|..|+ +++. +.++++.+........+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.+
T Consensus 143 p~~p~gi~~~----------~~v~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 211 (464)
T 2eq6_A 143 PLELKGFPFG----------EDVWDSTRALKVEEGLPKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMP-EILPQGDPE 211 (464)
T ss_dssp ECCBTTBCCS----------SSEECHHHHTCGGGCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCC----------CcEEcHHHHHhhhhhcCCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCC-ccccccCHH
Confidence 77775 5541 13566655544333357999999999999999999999999999999998 566654433
No 55
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.84 E-value=7.1e-21 Score=177.72 Aligned_cols=193 Identities=16% Similarity=0.201 Sum_probs=122.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCC----CccCCCCCCCCCCCCCCCCHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPSSYPMFVSRAQ 82 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 82 (325)
+||+|||||++|+++|..|++.|.+|+|||+++.+||+|... +.+...+.... .+.. ..+.++.. ....+..+
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~ 79 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK-GLLGAKVK-GVELDLPA 79 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH-CCTTEEEC-CEEECHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh-hcCCcccC-CCccCHHH
Confidence 699999999999999999999999999999998999987542 11110000000 0000 00000000 00112222
Q ss_pred HHH-----------HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCC
Q 020533 83 FIE-----------HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (325)
Q Consensus 83 ~~~-----------yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p 151 (325)
+.. .+.+.+++.++.. +.++.+ .+ + .+.+.|.. ++ .+ +.||+||+||| +.|
T Consensus 80 ~~~~~~~~~~~l~~~~~~~~~~~~v~~--~~g~~~-~i--~--~~~~~v~~-~g-------~~-~~~d~lviAtG--~~p 141 (455)
T 2yqu_A 80 LMAHKDKVVQANTQGVEFLFKKNGIAR--HQGTAR-FL--S--ERKVLVEE-TG-------EE-LEARYILIATG--SAP 141 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCEE--EESCEE-ES--S--SSEEEETT-TC-------CE-EEEEEEEECCC--EEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEE-Ee--c--CCeEEEee-CC-------EE-EEecEEEECCC--CCC
Confidence 222 2344555566543 666543 22 1 24455533 22 46 89999999999 678
Q ss_pred CCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHH
Q 020533 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (325)
Q Consensus 152 ~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~ 230 (325)
..|+++|.+. ..++++.+.... ...+++++|||+|.+|+|+|..|++.|.+|+++.+++ .++|..+..+
T Consensus 142 ~~~~~~g~~~--------~~v~~~~~~~~~-~~~~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~-~~l~~~~~~~ 210 (455)
T 2yqu_A 142 LIPPWAQVDY--------ERVVTSTEALSF-PEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMD-RILPTMDLEV 210 (455)
T ss_dssp CCCTTBCCCS--------SSEECHHHHTCC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSCHHH
T ss_pred CCCCCCCCCc--------CcEechHHhhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCC-ccccccCHHH
Confidence 8888887543 135666555432 2346999999999999999999999999999999998 5667544433
No 56
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=2.5e-20 Score=173.97 Aligned_cols=193 Identities=18% Similarity=0.199 Sum_probs=123.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.+...+... .....+..+..+.. .......
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 80 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE-NVTIDFA 80 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC-SCEECHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC-CCccCHH
Confidence 479999999999999999999999999999998 789887432 1111000000 00000000000000 0001111
Q ss_pred -----------HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 82 -----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 82 -----------~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.+.+++.+.+++.++. ++.++.+. ++ .+.+.|...++ + .+ +.+|+||+||| +.
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~-id----~~~v~V~~~~G-----~-~~-i~~d~lViATG--s~ 144 (455)
T 1ebd_A 81 KVQEWKASVVKKLTGGVEGLLKGNKVE--IVKGEAYF-VD----ANTVRVVNGDS-----A-QT-YTFKNAIIATG--SR 144 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCE--EEESEEEE-EE----TTEEEEEETTE-----E-EE-EECSEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEE-cc----CCeEEEEeCCC-----c-EE-EEeCEEEEecC--CC
Confidence 2334455666666654 37776543 32 25577766432 1 46 89999999999 67
Q ss_pred CCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 151 PFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 151 p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
|..|+++|.+. .++++.+.... ...+++++|||+|.+|+|+|..+++.|.+|+++.|++ .++|..+.
T Consensus 145 p~~~~~~g~~~---------~v~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~ 211 (455)
T 1ebd_A 145 PIELPNFKFSN---------RILDSTGALNL-GEVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAG-EILSGFEK 211 (455)
T ss_dssp ECCBTTBCCCS---------SEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SSSTTSCH
T ss_pred CCCCCCCCccc---------eEecHHHHhcc-ccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCC-ccccccCH
Confidence 88888877542 25555443332 2247999999999999999999999999999999998 56664433
No 57
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.83 E-value=8.8e-20 Score=170.42 Aligned_cols=191 Identities=18% Similarity=0.224 Sum_probs=121.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCC---CCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPH---LPFPSSYPMF 77 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~---~~~~~~~~~~ 77 (325)
.++||+|||||++|+++|..|++.|.+|+|||+ +.+||+|... +.|+..+... ..+..+.. +..+.. ...
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~-~~~ 81 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA-SPR 81 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC-CCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC-CCc
Confidence 358999999999999999999999999999999 6799988632 1111000000 00000110 111111 112
Q ss_pred CCHHHHHHH-----------HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEccc
Q 020533 78 VSRAQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (325)
Q Consensus 78 ~~~~~~~~y-----------l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG 146 (325)
.+..++..+ +.+.+++.++.. +.++.+. + +. ++|++.+ .+ +.||+||+|||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~~~~-~--~~----~~v~v~~--------~~-~~~d~lviATG 143 (458)
T 1lvl_A 82 LDIGQSVAWKDGIVDRLTTGVAALLKKHGVKV--VHGWAKV-L--DG----KQVEVDG--------QR-IQCEHLLLATG 143 (458)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECSCEEE-E--ET----TEEEETT--------EE-EECSEEEECCC
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEEEEEE-c--cC----CEEEEee--------EE-EEeCEEEEeCC
Confidence 233444333 234555666543 6666443 2 21 3455543 46 89999999999
Q ss_pred CCCCCCCCC-CCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeech
Q 020533 147 ETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSR 225 (325)
Q Consensus 147 ~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~ 225 (325)
+.|..|+ +| + .+.++++.+..... ..+++++|||+|.+|+|+|..|++.|.+|+++.+.+ .++|.
T Consensus 144 --s~p~~~~~~~----~------~~~v~~~~~~~~~~-~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~ 209 (458)
T 1lvl_A 144 --SSSVELPMLP----L------GGPVISSTEALAPK-ALPQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARE-RILPT 209 (458)
T ss_dssp --EEECCBTTBC----C------BTTEECHHHHTCCS-SCCSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSS-SSSTT
T ss_pred --CCCCCCCCCC----c------cCcEecHHHHhhhh-ccCCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCC-ccccc
Confidence 6676654 43 2 23466666554432 257999999999999999999999999999999998 56664
Q ss_pred hhHHH
Q 020533 226 EMVYL 230 (325)
Q Consensus 226 ~~~~~ 230 (325)
.+.++
T Consensus 210 ~~~~~ 214 (458)
T 1lvl_A 210 YDSEL 214 (458)
T ss_dssp SCHHH
T ss_pred cCHHH
Confidence 44333
No 58
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.83 E-value=1.3e-20 Score=175.72 Aligned_cols=179 Identities=20% Similarity=0.246 Sum_probs=119.7
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
+||+|||||++|+++|..|++. |.+|+|||+++.++.... ++.......... ....++..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~~~~~~g~~~~-------------~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSC-----GIALYLGKEIKN-------------NDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGG-----GHHHHHTTCBGG-------------GCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccc-----cchhhhcCCccc-------------CCHHHhhh
Confidence 5899999999999999999998 999999999986542110 000000000000 00111111
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
++.+.++++++. ++++++|..++.+. +.+.+...... +..+ +.+|+||+||| +.|..|++||.+.
T Consensus 63 ~~~~~~~~~gv~--~~~~~~v~~i~~~~--~~v~v~~~~~g----~~~~-~~~d~lviAtG--s~p~~p~i~g~~~---- 127 (452)
T 2cdu_A 63 SSPEELSNLGAN--VQMRHQVTNVDPET--KTIKVKDLITN----EEKT-EAYDKLIMTTG--SKPTVPPIPGIDS---- 127 (452)
T ss_dssp CCHHHHHHTTCE--EEESEEEEEEEGGG--TEEEEEETTTC----CEEE-EECSEEEECCC--EEECCCCCTTTTS----
T ss_pred cCHHHHHHcCCE--EEeCCEEEEEEcCC--CEEEEEecCCC----ceEE-EECCEEEEccC--CCcCCCCCCCCCC----
Confidence 223344556754 48899999987654 44444321111 1267 89999999999 7788888998753
Q ss_pred CCCCccEEecCCCCCCC-----CCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 166 ATGTGEVIHSTQYKNGK-----PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~-----~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
. .++++..+.+.. ...+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|
T Consensus 128 ---~-~v~~~~~~~~~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 186 (452)
T 2cdu_A 128 ---S-RVYLCKNYNDAKKLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHE-RVLY 186 (452)
T ss_dssp ---T-TEEECSSHHHHHHHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSS-STTT
T ss_pred ---C-CEEEeCcHHHHHHHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCC-chhh
Confidence 2 355544333211 1257999999999999999999999999999999998 4555
No 59
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.83 E-value=1.8e-20 Score=174.74 Aligned_cols=188 Identities=19% Similarity=0.192 Sum_probs=116.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecCCC----cc-CCCCCCCCCCCCCCCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLAKQ----FC-QLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~~ 80 (325)
++||+|||||++|+++|..|++.|.+|+|||++ .+||+|... +.|...+..... .. ....+.++.. ......
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~-~~~~~~ 81 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTT-INKFNW 81 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEE-EEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCC-CCccCH
Confidence 579999999999999999999999999999998 689987531 111100000000 00 0000000000 001122
Q ss_pred HHHHHHH-----------HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 81 AQFIEHL-----------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 81 ~~~~~yl-----------~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.++.++. ....++.++.. +.++ +..++ . ++|.+ ++ .+ +.+|+||+||| +
T Consensus 82 ~~l~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~i~--~----~~v~~-~g-------~~-~~~d~lviAtG--s 141 (450)
T 1ges_A 82 ETLIASRTAYIDRIHTSYENVLGKNNVDV--IKGF-ARFVD--A----KTLEV-NG-------ET-ITADHILIATG--G 141 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-CEEEE--T----TEEEE-TT-------EE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEec--C----CEEEE-CC-------EE-EEeCEEEECCC--C
Confidence 3333333 23334455432 4443 33332 1 24555 22 56 89999999999 7
Q ss_pred CCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
.|..|++||.+.. +++.++... ...+++++|||+|.+|+|+|..|++.|.+|+++.|.+ .++|..+.
T Consensus 142 ~p~~p~i~g~~~~----------~~~~~~~~~-~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~~ 208 (450)
T 1ges_A 142 RPSHPDIPGVEYG----------IDSDGFFAL-PALPERVAVVGAGYIGVELGGVINGLGAKTHLFEMFD-APLPSFDP 208 (450)
T ss_dssp EECCCCSTTGGGS----------BCHHHHHHC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CCCCCCCCCccce----------ecHHHhhhh-hhcCCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCC-chhhhhhH
Confidence 7888889887432 222222221 1247899999999999999999999999999999998 45554333
No 60
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.83 E-value=2.1e-20 Score=174.91 Aligned_cols=195 Identities=16% Similarity=0.166 Sum_probs=124.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCcc-CCCCCCCCCCCCCCCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (325)
++||+|||||++|+++|..|++.|++|+|+|++ .+||+|... +.+...+... ..+. .+..+.++.. .....
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~~~--~~~~~ 79 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGISGE--VTFDY 79 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEEEC--CEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCCCC--CccCH
Confidence 379999999999999999999999999999998 688877431 1111000000 0000 0000011000 00111
Q ss_pred -----------HHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 81 -----------AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 81 -----------~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
..+.+++.+.+++.++.. ++++.+. + + .+.+.|.+.++. ..+ +.+|+||+||| +
T Consensus 80 ~~~~~~~~~~~~~l~~~l~~~~~~~gv~~--~~g~~~~-i--d--~~~v~V~~~~G~-----~~~-~~~d~lViAtG--~ 144 (464)
T 2a8x_A 80 GIAYDRSRKVAEGRVAGVHFLMKKNKITE--IHGYGTF-A--D--ANTLLVDLNDGG-----TES-VTFDNAIIATG--S 144 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCEE--ECEEEEE-S--S--SSEEEEEETTSC-----CEE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeEEEE-e--c--CCeEEEEeCCCc-----eEE-EEcCEEEECCC--C
Confidence 123334556666666543 6665442 2 2 355777664431 156 89999999999 6
Q ss_pred CCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHH
Q 020533 150 NPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVY 229 (325)
Q Consensus 150 ~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~ 229 (325)
.|..|+++|.+. .++++.+.... ...+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|..+.+
T Consensus 145 ~~~~~~~~g~~~---------~~~~~~~~~~~-~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~~~~ 213 (464)
T 2a8x_A 145 STRLVPGTSLSA---------NVVTYEEQILS-RELPKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLP-RALPNEDAD 213 (464)
T ss_dssp EECCCTTCCCBT---------TEECHHHHHTC-SSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCHH
T ss_pred CCCCCCCCCCCc---------eEEecHHHhhc-cccCCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCHH
Confidence 677788877542 24555443332 2247999999999999999999999999999999998 577754444
Q ss_pred H
Q 020533 230 L 230 (325)
Q Consensus 230 ~ 230 (325)
+
T Consensus 214 ~ 214 (464)
T 2a8x_A 214 V 214 (464)
T ss_dssp H
T ss_pred H
Confidence 3
No 61
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.83 E-value=2.8e-21 Score=183.21 Aligned_cols=200 Identities=18% Similarity=0.164 Sum_probs=125.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC--------CCCCccCCC-CCCceEeecCCC----ccCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFPS 72 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~--------~~Gg~w~~~-~y~~~~~~~~~~----~~~~~~~~~~~ 72 (325)
.++||+|||||++|+++|..|++.|.+|+|||+++ .+||+|... +.|...+..+.. ...+..+.+..
T Consensus 31 ~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~ 110 (519)
T 3qfa_A 31 YDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKV 110 (519)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCccc
Confidence 35899999999999999999999999999999965 788887542 111110000000 00000111111
Q ss_pred CCCCCCCHHHHHHHHHHHHH-----------HcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeE
Q 020533 73 SYPMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 73 ~~~~~~~~~~~~~yl~~~a~-----------~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (325)
..........+.++..++.+ ..++. .+..++..++. ..+.|...++ +..+ +.||+|
T Consensus 111 ~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~---~i~g~a~~~d~----~~v~v~~~~g-----~~~~-i~~d~l 177 (519)
T 3qfa_A 111 EETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKVV---YENAYGQFIGP----HRIKATNNKG-----KEKI-YSAERF 177 (519)
T ss_dssp CSSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEET----TEEEEECTTC-----CCCE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEeeC----CEEEEEcCCC-----CEEE-EECCEE
Confidence 11123445555555554333 23432 23333443322 3345544332 1257 899999
Q ss_pred EEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCe
Q 020533 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (325)
Q Consensus 142 IiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~ 221 (325)
|+||| +.|..|++||.+.+ ++++.++.. ....+++++|||+|.+|+|+|..+++.|.+||++.|+ .
T Consensus 178 ViATG--s~p~~p~i~G~~~~---------~~t~~~~~~-l~~~~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~--~ 243 (519)
T 3qfa_A 178 LIATG--ERPRYLGIPGDKEY---------CISSDDLFS-LPYCPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS--I 243 (519)
T ss_dssp EECCC--EEECCCCCTTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS--C
T ss_pred EEECC--CCcCCCCCCCccCc---------eEcHHHHhh-hhhcCCeEEEECCcHHHHHHHHHHHHcCCeEEEEecc--c
Confidence 99999 78899999997543 233333333 2334678999999999999999999999999999985 4
Q ss_pred eechhhHHHHH
Q 020533 222 VLSREMVYLGV 232 (325)
Q Consensus 222 ~~p~~~~~~~~ 232 (325)
++|..+.++..
T Consensus 244 ~l~~~d~~~~~ 254 (519)
T 3qfa_A 244 LLRGFDQDMAN 254 (519)
T ss_dssp SSTTSCHHHHH
T ss_pred ccccCCHHHHH
Confidence 67766555443
No 62
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.83 E-value=5.2e-20 Score=172.93 Aligned_cols=201 Identities=14% Similarity=0.142 Sum_probs=123.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecC----CCcc-CCCCCCCCCCCCCCCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLA----KQFC-QLPHLPFPSSYPMFVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~----~~~~-~~~~~~~~~~~~~~~~~ 80 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||+|.... .++..+... ..+. .+..+..+.........
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~~~~~ 84 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDIKINV 84 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCEEECH
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCccCH
Confidence 47999999999999999999999999999999999999875421 110000000 0000 00000000000001122
Q ss_pred HHHHHH-----------HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCC-ceeEEEEEeCeEEEcccCC
Q 020533 81 AQFIEH-----------LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPG-REIEEYYSGRFLVVASGET 148 (325)
Q Consensus 81 ~~~~~y-----------l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~-~~~~~~~~ad~vIiAtG~~ 148 (325)
.++..+ +.+.+++.++. +++++.+.. +.+.+.|.+.++.... ..... +.||+||+|||.
T Consensus 85 ~~~~~~~~~~~~~l~~~~~~~~~~~gv~--~~~g~~~~~-----~~~~v~V~~~~G~~~~~~~~~~-i~~d~lViAtGs- 155 (478)
T 1v59_A 85 ANFQKAKDDAVKQLTGGIELLFKKNKVT--YYKGNGSFE-----DETKIRVTPVDGLEGTVKEDHI-LDVKNIIVATGS- 155 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCE--EEESEEEES-----SSSEEEEECCTTCTTCCSSCEE-EEEEEEEECCCE-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCE--EEEEEEEEc-----cCCeEEEEecCCCcccccccce-EEeCEEEECcCC-
Confidence 333322 34455566654 477776541 2356777654431100 00134 689999999994
Q ss_pred CCCCCCCCCCccccccCCCCCc-cEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhh
Q 020533 149 TNPFTPDIRGLCSFCSSATGTG-EVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (325)
Q Consensus 149 ~~p~~p~~~g~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~ 227 (325)
.| +.+||.+ + .+ .++++.+...... .+++++|||+|.+|+|+|..|++.|.+||++.|++ .++|..+
T Consensus 156 -~p--~~~~g~~-~------~~~~v~~~~~~~~~~~-~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~~~~ 223 (478)
T 1v59_A 156 -EV--TPFPGIE-I------DEEKIVSSTGALSLKE-IPKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP-QIGASMD 223 (478)
T ss_dssp -EE--CCCTTCC-C------CSSSEECHHHHTTCSS-CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSSSSC
T ss_pred -CC--CCCCCCC-C------CCceEEcHHHHHhhhc-cCceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCC-ccccccC
Confidence 44 2456654 2 33 4566555444222 47999999999999999999999999999999998 5666444
Q ss_pred H
Q 020533 228 V 228 (325)
Q Consensus 228 ~ 228 (325)
.
T Consensus 224 ~ 224 (478)
T 1v59_A 224 G 224 (478)
T ss_dssp H
T ss_pred H
Confidence 3
No 63
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.83 E-value=2.3e-21 Score=179.90 Aligned_cols=185 Identities=18% Similarity=0.183 Sum_probs=117.1
Q ss_pred eEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 9 EVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
+|+|||||++|+++|..|++.|. +|+|||+++..+. ..+.+ +... ...............
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~-------~~~~l--~~~~---~~~~~~~~~~~~~~~------ 63 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSF-------ANCAL--PYVI---GEVVEDRRYALAYTP------ 63 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSB-------CGGGH--HHHH---TTSSCCGGGTBCCCH------
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCC-------Ccchh--HHHH---cCCccchhhhhhcCH------
Confidence 69999999999999999999884 7999999886432 11100 0000 000000000001111
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
.++.+++++.. +.+++|++++... .. +......++ +..+ +.||+||+||| +.|+.|+++|...|
T Consensus 64 -~~~~~~~~i~~--~~~~~V~~id~~~--~~--~~~~~~~~~--~~~~-~~yd~lVIATG--s~p~~p~i~g~~~~---- 127 (437)
T 4eqs_A 64 -EKFYDRKQITV--KTYHEVIAINDER--QT--VSVLNRKTN--EQFE-ESYDKLILSPG--ASANSLGFESDITF---- 127 (437)
T ss_dssp -HHHHHHHCCEE--EETEEEEEEETTT--TE--EEEEETTTT--EEEE-EECSEEEECCC--EEECCCCCCCTTEE----
T ss_pred -HHHHHhcCCEE--EeCCeEEEEEccC--cE--EEEEeccCC--ceEE-EEcCEEEECCC--CccccccccCceEE----
Confidence 23345566544 8899999987654 33 333332222 3367 89999999999 77888888886554
Q ss_pred CCCccEEecCCCCC--CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHH
Q 020533 167 TGTGEVIHSTQYKN--GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (325)
Q Consensus 167 ~~~g~~~~~~~~~~--~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~ 230 (325)
..+.+......+ ....++++++|||+|.+|+|+|..+++.|.+||+++|++ .++|..+.+.
T Consensus 128 --~~~~~~~~~~l~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~ll~~~d~~~ 190 (437)
T 4eqs_A 128 --TLRNLEDTDAIDQFIKANQVDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSD-KINKLMDADM 190 (437)
T ss_dssp --CCSSHHHHHHHHHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSS-CCSTTSCGGG
T ss_pred --eeccHHHHHHHHHhhhccCCcEEEEECCccchhhhHHHHHhcCCcceeeeeec-cccccccchh
Confidence 221111110000 011246899999999999999999999999999999998 5666554433
No 64
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.83 E-value=3.2e-20 Score=172.95 Aligned_cols=177 Identities=17% Similarity=0.165 Sum_probs=118.8
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
+||+|||||++|+++|..|++. |.+|+|||+++..|.. .+.+ +.... .. +....++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-------~~~~--~~~~~--~~---------~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-------SAGM--QLYLE--GK---------VKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-------GGGH--HHHHT--TS---------SCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-------cccc--hhhhc--Cc---------cCCHHHhhc
Confidence 4899999999999999999998 8999999999876521 1000 00000 00 001111222
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
++.+.++++++. ++++++|..++.+. +. |.+.+...+ +..+ +.+|+||+||| +.|..|++||.+.
T Consensus 61 ~~~~~~~~~gv~--~~~~~~v~~i~~~~--~~--v~~~~~~~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~---- 125 (447)
T 1nhp_A 61 MTGEKMESRGVN--VFSNTEITAIQPKE--HQ--VTVKDLVSG--EERV-ENYDKLIISPG--AVPFELDIPGKDL---- 125 (447)
T ss_dssp CCHHHHHHTTCE--EEETEEEEEEETTT--TE--EEEEETTTC--CEEE-EECSEEEECCC--EEECCCCSTTTTS----
T ss_pred CCHHHHHHCCCE--EEECCEEEEEeCCC--CE--EEEEecCCC--ceEE-EeCCEEEEcCC--CCcCCCCCCCCCC----
Confidence 223344556654 47899999887654 44 444331111 2246 89999999999 7788899998753
Q ss_pred CCCCccEEecCCCCCC-------CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 166 ATGTGEVIHSTQYKNG-------KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~-------~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
. .++++..+.+. ....+++++|||+|.+|+|+|..+++.|.+|+++.+.+ .++|
T Consensus 126 ---~-~v~~~~~~~~~~~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~ 186 (447)
T 1nhp_A 126 ---D-NIYLMRGRQWAIKLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD-RPLG 186 (447)
T ss_dssp ---B-SEECCCHHHHHHHHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-STTT
T ss_pred ---C-CeEEECCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCc-cccc
Confidence 2 25554433221 11257999999999999999999999999999999988 4444
No 65
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.83 E-value=4.5e-20 Score=173.56 Aligned_cols=197 Identities=19% Similarity=0.190 Sum_probs=122.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC---C------CCCCccCCC-CCCceEeecCCC----ccCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE---N------CYASIWKKY-SYDRLRLHLAKQ----FCQLPHLPFP 71 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~---~------~~Gg~w~~~-~y~~~~~~~~~~----~~~~~~~~~~ 71 (325)
..+||+|||||++|+++|..|++.|++|+|||+. + .+||+|... +.|...+..+.. ......+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 4689999999999999999999999999999942 1 388988542 111110000000 0000001111
Q ss_pred CCCCCCCCHHHHHHHHHHHHHH-----------cCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCe
Q 020533 72 SSYPMFVSRAQFIEHLDHYVSH-----------FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRF 140 (325)
Q Consensus 72 ~~~~~~~~~~~~~~yl~~~a~~-----------~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~ 140 (325)
..........++.++..++.+. .++. .+......++ ...+.|...++ + .+ +.+|+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~---~~~g~a~~~~----~~~v~v~~~~g-----~-~~-~~~d~ 153 (483)
T 3dgh_A 88 VDDKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVE---YINGLGSFVD----SHTLLAKLKSG-----E-RT-ITAQT 153 (483)
T ss_dssp CCCCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE----TTEEEEECTTC-----C-EE-EEEEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEeEEEEcc----CCEEEEEeCCC-----e-EE-EEcCE
Confidence 1111234555666655554432 2332 2233333222 23455554332 1 57 89999
Q ss_pred EEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 141 LVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 141 vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
||+||| +.|..|++||.+.+ .+++.+... ....+++++|||+|.+|+|+|..+++.|.+|+++.|+.
T Consensus 154 lviATG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~- 220 (483)
T 3dgh_A 154 FVIAVG--GRPRYPDIPGAVEY---------GITSDDLFS-LDREPGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI- 220 (483)
T ss_dssp EEECCC--EEECCCSSTTHHHH---------CBCHHHHTT-CSSCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-
T ss_pred EEEeCC--CCcCCCCCCCcccc---------cCcHHHHhh-hhhcCCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-
Confidence 999999 78999999998653 234333333 23357899999999999999999999999999999853
Q ss_pred eeechhhHHH
Q 020533 221 HVLSREMVYL 230 (325)
Q Consensus 221 ~~~p~~~~~~ 230 (325)
++|..+.++
T Consensus 221 -~l~~~d~~~ 229 (483)
T 3dgh_A 221 -VLRGFDQQM 229 (483)
T ss_dssp -SSTTSCHHH
T ss_pred -CCcccCHHH
Confidence 555544433
No 66
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.82 E-value=2.2e-20 Score=175.68 Aligned_cols=189 Identities=15% Similarity=0.144 Sum_probs=116.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeecC----CCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
.+||+|||||++|+++|..|++.|++|+|||+ +.+||+|... +++...+... ........+.+.... ......
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~~-~~~~~~ 103 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYAD-PIFNWE 103 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCCC-CEECHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccCC-CccCHH
Confidence 57999999999999999999999999999999 6789987531 1111000000 000000001110000 011222
Q ss_pred -----------HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEe-ecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 82 -----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 82 -----------~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.+..++....+..++.. ..+ ++..++. +.+.+. ++ .. +.+|++|+||| +
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g-~~~~i~~------~~v~v~~~~-------~~-~~~d~lviAtG--~ 164 (484)
T 3o0h_A 104 KLVAAKNKEISRLEGLYREGLQNSNVHI--YES-RAVFVDE------HTLELSVTG-------ER-ISAEKILIATG--A 164 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EES-CEEEEET------TEEEETTTC-------CE-EEEEEEEECCC--E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEe-EEEEeeC------CEEEEecCC-------eE-EEeCEEEEccC--C
Confidence 23334444555556542 443 3444431 235553 21 56 89999999999 6
Q ss_pred CCC-CCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 150 NPF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 150 ~p~-~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
.|. .|++||.+.. +++..+.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+.
T Consensus 165 ~p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~-~~l~~~~~ 232 (484)
T 3o0h_A 165 KIVSNSAIKGSDLC----------LTSNEIFD-LEKLPKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGD-LILRNFDY 232 (484)
T ss_dssp EECCC--CBTGGGS----------BCTTTGGG-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred CcccCCCCCCcccc----------ccHHHHHh-HHhcCCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCC-ccccccCH
Confidence 787 8888887643 23333322 23347999999999999999999999999999999998 45554443
No 67
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.82 E-value=1.4e-20 Score=174.44 Aligned_cols=174 Identities=17% Similarity=0.169 Sum_probs=116.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
.+||+|||||++|+++|..|++.|. +|+|+|+++.++ |... ..++.+... .. ...++.
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~-------~~~~--~l~~~~~~~--~~---------~~~~~~ 63 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIP-------HHLP--PLSKAYLAG--KA---------TAESLY 63 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCC-------BCSG--GGGTTTTTT--CS---------CSGGGB
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCC-------CcCC--CCcHHHhCC--CC---------ChHHhc
Confidence 4799999999999999999999998 799999987643 1100 001111000 00 000111
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
....+++++.++. ++++++|..++.+. +.|++.++ .+ +.||+||+||| +.|+.|++||.+.
T Consensus 64 ~~~~~~~~~~gv~--~~~~~~v~~i~~~~----~~v~~~~g-------~~-~~~d~lviAtG--~~p~~~~i~G~~~--- 124 (431)
T 1q1r_A 64 LRTPDAYAAQNIQ--LLGGTQVTAINRDR----QQVILSDG-------RA-LDYDRLVLATG--GRPRPLPVASGAV--- 124 (431)
T ss_dssp SSCHHHHHHTTEE--EECSCCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECCCGGGTTHH---
T ss_pred ccCHHHHHhCCCE--EEeCCEEEEEECCC----CEEEECCC-------CE-EECCEEEEcCC--CCccCCCCCCccc---
Confidence 1112334556654 48889999987643 35666543 46 89999999999 6788888888753
Q ss_pred CCCCCc-c-EEecCCCCC-----CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 165 SATGTG-E-VIHSTQYKN-----GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 165 ~~~~~g-~-~~~~~~~~~-----~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
.+ . +++.....+ .....+++|+|||+|.+|+|+|..+.+.|.+|+++.+.+ .++|
T Consensus 125 ----~~~~~v~~~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~-~~l~ 186 (431)
T 1q1r_A 125 ----GKANNFRYLRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAA-RVLE 186 (431)
T ss_dssp ----HHSTTEEESSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-STTT
T ss_pred ----CCCceEEEECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCC-cccc
Confidence 22 1 332221111 112357999999999999999999999999999999988 4444
No 68
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.82 E-value=5.1e-20 Score=172.88 Aligned_cols=199 Identities=14% Similarity=0.123 Sum_probs=119.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC------CCCccCCC-CCCceEeecCC-Ccc----CCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC------YASIWKKY-SYDRLRLHLAK-QFC----QLPHLPFPSS 73 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~------~Gg~w~~~-~y~~~~~~~~~-~~~----~~~~~~~~~~ 73 (325)
.++||+|||||++|+++|..|++.|++|+|||+++. +||+|... +.+...+.... ... .+..+.+...
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~~ 81 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGISTG 81 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEECS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCcccC
Confidence 368999999999999999999999999999999974 44444221 11100000000 000 0001110000
Q ss_pred CCCCCCHHHHHHHH-----------HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 74 YPMFVSRAQFIEHL-----------DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 74 ~~~~~~~~~~~~yl-----------~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
........+.++. ....++.++.. ..++ +..+ +...+.|...++ +... +.+|+||
T Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~--~~g~-~~~~----~~~~~~v~~~~g-----~~~~-~~~d~lv 147 (476)
T 3lad_A 82 -EVAIDVPTMIARKDQIVRNLTGGVASLIKANGVTL--FEGH-GKLL----AGKKVEVTAADG-----SSQV-LDTENVI 147 (476)
T ss_dssp -CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE--EESE-EEEC----STTCEEEECTTS-----CEEE-ECCSCEE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEeE-EEEe----cCCEEEEEcCCC-----ceEE-EEcCEEE
Confidence 0112223333322 23344455432 4443 2222 235566665433 2257 8999999
Q ss_pred EcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCee
Q 020533 143 VASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHV 222 (325)
Q Consensus 143 iAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~ 222 (325)
+||| +.|..|+.++.+ ...++++.+... ....+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .+
T Consensus 148 lAtG--~~p~~~~~~~~~--------~~~v~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~ 215 (476)
T 3lad_A 148 LASG--SKPVEIPPAPVD--------QDVIVDSTGALD-FQNVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMD-KF 215 (476)
T ss_dssp ECCC--EEECCCTTSCCC--------SSSEEEHHHHTS-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS-SS
T ss_pred EcCC--CCCCCCCCCCCC--------cccEEechhhhc-cccCCCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCC-Cc
Confidence 9999 667666554432 224566555443 33457999999999999999999999999999999998 56
Q ss_pred echhhHHH
Q 020533 223 LSREMVYL 230 (325)
Q Consensus 223 ~p~~~~~~ 230 (325)
+|..+..+
T Consensus 216 l~~~~~~~ 223 (476)
T 3lad_A 216 LPAVDEQV 223 (476)
T ss_dssp STTSCHHH
T ss_pred CcccCHHH
Confidence 66544433
No 69
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.82 E-value=1.2e-19 Score=170.80 Aligned_cols=196 Identities=13% Similarity=0.136 Sum_probs=118.3
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEe--------cCCCCCCccCCC-CCCceEeecCCCc----cCCCCCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILE--------RENCYASIWKKY-SYDRLRLHLAKQF----CQLPHLPFPS 72 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e--------~~~~~Gg~w~~~-~y~~~~~~~~~~~----~~~~~~~~~~ 72 (325)
++||+|||||++|+++|..|++ .|.+|+||| +.+.+||+|... ++|...+...... .....+.+..
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~ 82 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGWEL 82 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEC
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCccc
Confidence 5799999999999999999999 999999999 366789987531 1111000000000 0000000000
Q ss_pred CCC-CCCCHHHHHHHH-----------HHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEE---eecCCCCceeEEEE
Q 020533 73 SYP-MFVSRAQFIEHL-----------DHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKA---SNLLSPGREIEEYY 136 (325)
Q Consensus 73 ~~~-~~~~~~~~~~yl-----------~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~---~~~~~~~~~~~~~~ 136 (325)
... ......++.++. ....++. ++. ++.++ +..++ . ..+.+.. .++. .... +
T Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv~--~~~g~-~~~i~--~--~~v~v~~~~~~~g~----~~~~-~ 150 (490)
T 1fec_A 83 DRESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGLT--FHQGF-GALQD--N--HTVLVRESADPNSA----VLET-L 150 (490)
T ss_dssp CGGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE--EEESE-EEEEE--T--TEEEEESSSSTTSC----EEEE-E
T ss_pred CCcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE--EEEeE-EEEee--C--CEEEEEeeccCCCC----ceEE-E
Confidence 000 011223333332 2333444 543 35554 55543 1 3333332 0110 0146 8
Q ss_pred EeCeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhc---cCeEE
Q 020533 137 SGRFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANH---AAKTS 213 (325)
Q Consensus 137 ~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~---~~~v~ 213 (325)
.+|+||+||| +.|..|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..+.+. |.+|+
T Consensus 151 ~~d~lviAtG--s~p~~p~i~g~~~~----------~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vt 217 (490)
T 1fec_A 151 DTEYILLATG--SWPQHLGIEGDDLC----------ITSNEAFY-LDEAPKRALCVGGGYISIEFAGIFNAYKARGGQVD 217 (490)
T ss_dssp EEEEEEECCC--EEECCCCSBTGGGC----------BCHHHHTT-CSSCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEE
T ss_pred EcCEEEEeCC--CCCCCCCCCCccce----------ecHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHhhccCcCeEE
Confidence 9999999999 77888888887432 23333322 223478999999999999999999999 99999
Q ss_pred EEEecCCeeechhhH
Q 020533 214 LVVRSPVHVLSREMV 228 (325)
Q Consensus 214 ~~~r~~~~~~p~~~~ 228 (325)
++.|.+ .++|..+.
T Consensus 218 lv~~~~-~~l~~~d~ 231 (490)
T 1fec_A 218 LAYRGD-MILRGFDS 231 (490)
T ss_dssp EEESSS-SSSTTSCH
T ss_pred EEEcCC-CcccccCH
Confidence 999998 56665433
No 70
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.82 E-value=2.6e-20 Score=174.26 Aligned_cols=190 Identities=17% Similarity=0.154 Sum_probs=117.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeec----CCCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|++|+|||+ +.+||+|... +.+...+.. ......++.+.+.... ......
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~~~ 82 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVGE-SRFDWA 82 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEECC-CEECHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccCC-CCcCHH
Confidence 58999999999999999999999999999999 6799987531 111100000 0000000001000000 011222
Q ss_pred -----------HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 82 -----------QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 82 -----------~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.+..++....+..++.. ..+ ++..++ .+.+.+... + .. +.+|++|+||| +.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g-~~~~i~------~~~v~~~~~--~----~~-~~~d~lviAtG--~~ 144 (463)
T 4dna_A 83 KLVAAKEQEIARLEGLYRKGLANAGAEI--LDT-RAELAG------PNTVKLLAS--G----KT-VTAERIVIAVG--GH 144 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCEE--EES-CEEESS------SSEEEETTT--T----EE-EEEEEEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEE--EEE-EEEEee------CCEEEEecC--C----eE-EEeCEEEEecC--CC
Confidence 23333444455556542 443 333331 234555211 1 67 89999999999 67
Q ss_pred CC-CCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 151 PF-TPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 151 p~-~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
|. .|++||.+.. +++.++.. ....+++++|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|..+.
T Consensus 145 p~~~p~i~G~~~~----------~~~~~~~~-~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~-~~l~~~~~ 211 (463)
T 4dna_A 145 PSPHDALPGHELC----------ITSNEAFD-LPALPESILIAGGGYIAVEFANIFHGLGVKTTLIYRGK-EILSRFDQ 211 (463)
T ss_dssp ECCCTTSTTGGGC----------BCHHHHTT-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSSTTSCH
T ss_pred cccCCCCCCcccc----------ccHHHHhh-hhcCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCC-ccccccCH
Confidence 88 8889887632 23333222 22347999999999999999999999999999999998 45554443
No 71
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.81 E-value=1.8e-20 Score=175.64 Aligned_cols=192 Identities=17% Similarity=0.164 Sum_probs=119.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceEeecC-CC---ccCCCCC-CCCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLRLHLA-KQ---FCQLPHL-PFPSSYPMFVS 79 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~~~~~-~~---~~~~~~~-~~~~~~~~~~~ 79 (325)
.++||+|||||++|+++|..|++.|++|+|||++ .+||+|.+.. ++...+... .. ....+.+ ..+.. .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~ 80 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAAT-VPTID 80 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCC-CCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCC-CCccC
Confidence 3589999999999999999999999999999998 7899886321 111000000 00 0001111 01100 01112
Q ss_pred HHHHH-------HHHH-----HHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEccc
Q 020533 80 RAQFI-------EHLD-----HYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASG 146 (325)
Q Consensus 80 ~~~~~-------~yl~-----~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG 146 (325)
..++. +++. +..++. ++. ++.+ ++..++ .+.+.|.+.++ +... +.+|+||+|||
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~--~~~g-~~~~~~----~~~~~v~~~~g-----~~~~-~~~d~lviAtG 147 (467)
T 1zk7_A 81 RSKLLAQQQARVDELRHAKYEGILGGNPAIT--VVHG-EARFKD----DQSLTVRLNEG-----GERV-VMFDRCLVATG 147 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHHHHTTCTTEE--EEEE-EEEEEE----TTEEEEEETTS-----SEEE-EECSEEEECCC
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhccCCeE--EEEE-EEEEcc----CCEEEEEeCCC-----ceEE-EEeCEEEEeCC
Confidence 22332 2332 122222 322 2333 344443 24566665443 1256 89999999999
Q ss_pred CCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 147 ETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 147 ~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
+.|..|++||.+.. .++++.+..+ ....+++++|||+|.+|+|+|..+++.|.+|+++.|++ +++|
T Consensus 148 --s~p~~p~i~G~~~~--------~~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~ 213 (467)
T 1zk7_A 148 --ASPAVPPIPGLKES--------PYWTSTEALA-SDTIPERLAVIGSSVVALELAQAFARLGSKVTVLARNT-LFFR 213 (467)
T ss_dssp --EEECCCCCTTTTTS--------CCBCHHHHHH-CSSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC-TTTT
T ss_pred --CCCCCCCCCCCCcC--------ceecHHHHhc-ccccCCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECC-ccCC
Confidence 78889999998653 2344333322 22347999999999999999999999999999999998 5666
No 72
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.81 E-value=6.1e-20 Score=172.50 Aligned_cols=178 Identities=17% Similarity=0.321 Sum_probs=118.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
.+||+|||||++|+++|..|++. |.+|+|||+++..++... ++ +... .. ......++.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~-----~~----~~~~---~~--------~~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQC-----GL----PYVI---SG--------AIASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGG-----GH----HHHH---TT--------SSSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCC-----Cc----chhh---cC--------CcCCHHHhh
Confidence 36999999999999999999996 889999999987642110 00 0000 00 000111111
Q ss_pred H-HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 85 E-HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 85 ~-yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
. +...+.+.+++. ++++++|..++.++ +.+.+.... .+ +..+ +.||+||+||| +.|..|++||.+.
T Consensus 96 ~~~~~~~~~~~gv~--~~~~~~v~~i~~~~--~~v~v~~~~--~g--~~~~-~~~d~lviAtG--~~p~~p~i~G~~~-- 162 (480)
T 3cgb_A 96 ARNVKTFRDKYGID--AKVRHEVTKVDTEK--KIVYAEHTK--TK--DVFE-FSYDRLLIATG--VRPVMPEWEGRDL-- 162 (480)
T ss_dssp SSCHHHHHHTTCCE--EESSEEEEEEETTT--TEEEEEETT--TC--CEEE-EECSEEEECCC--EEECCCCCBTTTS--
T ss_pred hcCHHHHHhhcCCE--EEeCCEEEEEECCC--CEEEEEEcC--CC--ceEE-EEcCEEEECCC--CcccCCCCCCccC--
Confidence 1 223344555654 48889999987654 444444311 11 2147 89999999999 7788888998753
Q ss_pred cCCCCCccEEecCCCCCCC-------CCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 164 SSATGTGEVIHSTQYKNGK-------PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~-------~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
. .+++...+.+.. ...+++|+|||+|.+|+|+|..+.+.|.+|+++.|.+ .++|
T Consensus 163 -----~-~v~~~~~~~~~~~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~-~~l~ 223 (480)
T 3cgb_A 163 -----Q-GVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERND-HIGT 223 (480)
T ss_dssp -----B-TEECCSSHHHHHHHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGG-GTTS
T ss_pred -----C-CEEEeCCHHHHHHHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCC-chhh
Confidence 2 244433322211 1268999999999999999999999999999999988 4555
No 73
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.81 E-value=5.8e-21 Score=179.84 Aligned_cols=200 Identities=16% Similarity=0.163 Sum_probs=125.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEec--------CCCCCCccCCC-CCCceEeecCC----CccCCCCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILER--------ENCYASIWKKY-SYDRLRLHLAK----QFCQLPHLPFPS 72 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~--------~~~~Gg~w~~~-~y~~~~~~~~~----~~~~~~~~~~~~ 72 (325)
.++||+|||||++|+++|..|++.|.+|+|||+ ...+||+|... ++|...+.... .......+.+..
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~ 84 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEV 84 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCccc
Confidence 458999999999999999999999999999998 56789988542 11111100000 000001111111
Q ss_pred CCCCCCCHHHHHHHHHHHHH-----------HcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeE
Q 020533 73 SYPMFVSRAQFIEHLDHYVS-----------HFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 73 ~~~~~~~~~~~~~yl~~~a~-----------~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (325)
.........++.++..++.+ ..++. .+..++..++ ...+.|...++ +..+ +.||+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~i~g~~~~~~----~~~v~v~~~~g-----~~~~-~~~d~l 151 (488)
T 3dgz_A 85 AQPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVK---YFNIKASFVD----EHTVRGVDKGG-----KATL-LSAEHI 151 (488)
T ss_dssp CSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECCEEEESS----SSEEEEECTTS-----CEEE-EEEEEE
T ss_pred CCcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEEEEEEEcc----CCeEEEEeCCC-----ceEE-EECCEE
Confidence 11123445555555444333 23332 2333333321 23445544332 2257 899999
Q ss_pred EEcccCCCCCCCCC-CCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 142 VVASGETTNPFTPD-IRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 142 IiAtG~~~~p~~p~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
|+||| +.|..|+ +||.+.. .+++.++.. ....+++++|||+|.+|+|+|..+++.|.+|+++.|++
T Consensus 152 ViATG--s~p~~p~~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~- 218 (488)
T 3dgz_A 152 VIATG--GRPRYPTQVKGALEY---------GITSDDIFW-LKESPGKTLVVGASYVALECAGFLTGIGLDTTVMMRSI- 218 (488)
T ss_dssp EECCC--EEECCCSSCBTHHHH---------CBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-
T ss_pred EEcCC--CCCCCCCCCCCcccc---------cCcHHHHHh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-
Confidence 99999 7899998 9997543 234333333 23356889999999999999999999999999999875
Q ss_pred eeechhhHHHHH
Q 020533 221 HVLSREMVYLGV 232 (325)
Q Consensus 221 ~~~p~~~~~~~~ 232 (325)
++|..+.++..
T Consensus 219 -~l~~~d~~~~~ 229 (488)
T 3dgz_A 219 -PLRGFDQQMSS 229 (488)
T ss_dssp -SSTTSCHHHHH
T ss_pred -ccccCCHHHHH
Confidence 56655544443
No 74
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.81 E-value=2.6e-20 Score=175.44 Aligned_cols=195 Identities=15% Similarity=0.187 Sum_probs=121.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC-CCCCceEeecC----CCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK-YSYDRLRLHLA----KQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~-~~y~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
++||+|||||++|+++|..|++.|.+|+|||+++ +||+|.+ .+.|...+... .....++.+.++.. ....+..
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~-~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~~-~~~~~~~ 85 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA-YGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQVD-RISVNGK 85 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC-SSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEECS-EEEECHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC-CCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCCC-CCccCHH
Confidence 4899999999999999999999999999999975 8887642 11111100000 00000111111100 0123455
Q ss_pred HHHHHHHHHHHHcCCC----------ceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCC
Q 020533 82 QFIEHLDHYVSHFNIG----------PSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~----------~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p 151 (325)
++.+++.++.+++... .. .+..+..-. +.++|.+.++ .+ +.+|+||+||| +.|
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~g~a~~~------~~~~v~~~~~-------~~-~~~d~lViATG--s~p 148 (492)
T 3ic9_A 86 AVMKRIQTERDRFVGFVVESVESFDEQD-KIRGFAKFL------DEHTLQVDDH-------SQ-VIAKRIVIATG--SRP 148 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCGGG-EEESCEEEE------ETTEEEETTT-------EE-EEEEEEEECCC--EEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcCee-EEEEEEEEe------cCCEEEEcCC-------cE-EEeCEEEEccC--CCC
Confidence 6666665554443110 00 111111101 2245666432 67 89999999999 778
Q ss_pred CCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhhHHH
Q 020533 152 FTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMVYL 230 (325)
Q Consensus 152 ~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~~~ 230 (325)
..|++++.. ...++++.+... ....+++++|||+|.+|+|+|..+++.|.+|+++.|++ .++|..+.++
T Consensus 149 ~~p~~~~~~--------~~~v~t~~~~~~-~~~~~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d~~~ 217 (492)
T 3ic9_A 149 NYPEFLAAA--------GSRLLTNDNLFE-LNDLPKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSG-SVANLQDEEM 217 (492)
T ss_dssp CCCHHHHTT--------GGGEECHHHHTT-CSSCCSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTT-CCTTCCCHHH
T ss_pred cCCCCCCcc--------CCcEEcHHHHhh-hhhcCCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECC-cccccCCHHH
Confidence 888765432 224555554443 33458999999999999999999999999999999998 4566544433
No 75
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.81 E-value=2e-20 Score=183.01 Aligned_cols=160 Identities=21% Similarity=0.248 Sum_probs=121.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
.++||+|||||++||++|..|+++|++|+|||+++.+||.|... ..+ +.+....++.+
T Consensus 390 ~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~-------------~~~---------p~~~~~~~~~~ 447 (690)
T 3k30_A 390 SDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQE-------------SAL---------PGLSAWGRVKE 447 (690)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHH-------------HTS---------TTCGGGGHHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeec-------------cCC---------CchhHHHHHHH
Confidence 45799999999999999999999999999999999999986631 000 12234457888
Q ss_pred HHHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC------CCCCCCCC
Q 020533 86 HLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRG 158 (325)
Q Consensus 86 yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~------p~~p~~~g 158 (325)
|+...++++ ++. +++++++. ..+. .+ +.+|+||+|||.... |..|++||
T Consensus 448 ~~~~~~~~~~gv~--~~~~~~v~--------------~~~~-------~~-~~~d~lvlAtG~~~~~~~~~~~~~~~i~G 503 (690)
T 3k30_A 448 YREAVLAELPNVE--IYRESPMT--------------GDDI-------VE-FGFEHVITATGATWRTDGVARFHTTALPI 503 (690)
T ss_dssp HHHHHHHTCTTEE--EESSCCCC--------------HHHH-------HH-TTCCEEEECCCEEECSSCCSSSCSSCCCB
T ss_pred HHHHHHHHcCCCE--EEECCeec--------------HHHH-------hh-cCCCEEEEcCCCccccccccccCCCCCCC
Confidence 888888876 543 35554321 1111 34 689999999995432 56778888
Q ss_pred ccccccCCCCCccEEecCCCCCCCCCCCCeEEEEC--cCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 159 LCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG--~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+. ..++++.++.......+++|+||| +|.+|+|+|..|++.|.+|+++.+.+
T Consensus 504 ~~~--------~~v~~~~~~l~~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~ 558 (690)
T 3k30_A 504 AEG--------MQVLGPDDLFAGRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGA 558 (690)
T ss_dssp CTT--------SEEECHHHHHTTCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCC--------CcEEcHHHHhCCCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEeccc
Confidence 753 356666666555556789999999 99999999999999999999999988
No 76
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.81 E-value=2.8e-20 Score=173.21 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=121.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..++|+|||||++||++|..|++.|++|+|||+.+.+||.|.+. ++. +....++.+
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~g---------------ip~---------~~~~~~~~~ 176 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYG---------------IPG---------FKLEKSVVE 176 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeec---------------CCC---------ccCCHHHHH
Confidence 46799999999999999999999999999999999999987532 111 112246777
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
+..++++++++.. ++++.|. ..+++++ .. +.||+||+|||.. .|+.+.+||.+.
T Consensus 177 ~~~~~l~~~gv~~--~~~~~v~----------~~v~~~~--------~~-~~~d~vvlAtG~~-~~~~~~ipG~~~---- 230 (456)
T 2vdc_G 177 RRVKLLADAGVIY--HPNFEVG----------RDASLPE--------LR-RKHVAVLVATGVY-KARDIKAPGSGL---- 230 (456)
T ss_dssp HHHHHHHHTTCEE--ETTCCBT----------TTBCHHH--------HH-SSCSEEEECCCCC-EECCTTCSCCTT----
T ss_pred HHHHHHHHCCcEE--EeCCEec----------cEEEhhH--------hH-hhCCEEEEecCCC-CCCCCCCCCCcC----
Confidence 7788888888654 7776541 0122222 23 5789999999953 366677888652
Q ss_pred CCCCccEEecCC---------CCC--------CCCCCCCeEEEECcCCCHHHHHHHHhhccC-eEEEEEecCCeeechhh
Q 020533 166 ATGTGEVIHSTQ---------YKN--------GKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSPVHVLSREM 227 (325)
Q Consensus 166 ~~~~g~~~~~~~---------~~~--------~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~-~v~~~~r~~~~~~p~~~ 227 (325)
.+ +++..+ +.. .....+|+|+|||+|++|+|+|..+.+.|. +|++++|++...+|...
T Consensus 231 ---~g-v~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~~~~p~~~ 306 (456)
T 2vdc_G 231 ---GN-IVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDRKNMPGSQ 306 (456)
T ss_dssp ---TT-EEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCSTTCSSCH
T ss_pred ---CC-cEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCccCCCCCH
Confidence 33 332211 111 123578999999999999999999999987 59999999865566544
Q ss_pred H
Q 020533 228 V 228 (325)
Q Consensus 228 ~ 228 (325)
.
T Consensus 307 ~ 307 (456)
T 2vdc_G 307 R 307 (456)
T ss_dssp H
T ss_pred H
Confidence 3
No 77
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.80 E-value=3.1e-19 Score=167.63 Aligned_cols=194 Identities=20% Similarity=0.229 Sum_probs=122.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC-CCCceEeec----CCCccCCCCCCCCCCCCCCCCHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY-SYDRLRLHL----AKQFCQLPHLPFPSSYPMFVSRA 81 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~-~y~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 81 (325)
.+||+|||||++|+++|..|++.|++|+|||++ .+||+|... +++...+.. .........+.++.. ....+..
T Consensus 20 ~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~ 97 (478)
T 3dk9_A 20 SYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC-EGKFNWR 97 (478)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC-CCCCCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC-CCccCHH
Confidence 489999999999999999999999999999977 688887432 111100000 000001111111111 1223444
Q ss_pred HHHHHHHHH-----------HHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 82 QFIEHLDHY-----------VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 82 ~~~~yl~~~-----------a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
++.++...+ ++..++.. ..++ +..++ ...+.|.... .+ +.+|+||+||| +.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~gv~~--~~g~-~~~~~----~~~~~v~~~g--------~~-~~~d~lviAtG--~~ 159 (478)
T 3dk9_A 98 VIKEKRDAYVSRLNAIYQNNLTKSHIEI--IRGH-AAFTS----DPKPTIEVSG--------KK-YTAPHILIATG--GM 159 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCEE--EESC-EEECS----CSSCEEEETT--------EE-EECSCEEECCC--EE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcEE--EEeE-EEEee----CCeEEEEECC--------EE-EEeeEEEEccC--CC
Confidence 555544433 33334332 3332 22221 2346666321 67 89999999999 78
Q ss_pred CCCC---CCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeechhh
Q 020533 151 PFTP---DIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLSREM 227 (325)
Q Consensus 151 p~~p---~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~ 227 (325)
|..| ++||.+.. +++..+.. ....+++++|||+|.+|+|+|..+++.|.+|+++.|.+ .++|..+
T Consensus 160 p~~p~~~~i~G~~~~----------~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~~l~~~d 227 (478)
T 3dk9_A 160 PSTPHESQIPGASLG----------ITSDGFFQ-LEELPGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD-KVLRSFD 227 (478)
T ss_dssp ECCCCTTTSTTGGGS----------BCHHHHTT-CCSCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS-SSCTTSC
T ss_pred CCCCCcCCCCCCcee----------EchHHhhc-hhhcCccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCC-ccccccC
Confidence 8888 88887532 33333332 22347899999999999999999999999999999998 5667665
Q ss_pred HHHHH
Q 020533 228 VYLGV 232 (325)
Q Consensus 228 ~~~~~ 232 (325)
..+..
T Consensus 228 ~~~~~ 232 (478)
T 3dk9_A 228 SMIST 232 (478)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 78
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.79 E-value=2.5e-19 Score=174.89 Aligned_cols=150 Identities=20% Similarity=0.268 Sum_probs=112.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
.++||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+ +......++.+
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~-------------~~---------~~~~~~~~~~~ 429 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAK-------------QI---------PGKEEFYETLR 429 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHT-------------TS---------TTCTTHHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccc-------------cC---------CCHHHHHHHHH
Confidence 357999999999999999999999999999999999998875310 00 01112345666
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEE-EeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY-SGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~-~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
++.+.++++++.. ++++.|.. .. + .+|+||+||| +.|+.|++||.+.
T Consensus 430 ~~~~~~~~~gv~~--~~~~~v~~------------------------~~-~~~~d~lviAtG--~~p~~~~i~G~~~--- 477 (671)
T 1ps9_A 430 YYRRMIEVTGVTL--KLNHTVTA------------------------DQ-LQAFDETILASG--IVPRTPPIDGIDH--- 477 (671)
T ss_dssp HHHHHHHHHTCEE--EESCCCCS------------------------SS-SCCSSEEEECCC--EEECCCCCBTTTS---
T ss_pred HHHHHHHHcCCEE--EeCcEecH------------------------HH-hhcCCEEEEccC--CCcCCCCCCCCCC---
Confidence 7777777777544 66664310 12 4 7899999999 6788889998764
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEE
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSL 214 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~ 214 (325)
..++++.++.......+++|+|||+|.+|+|+|..|++.|.+|++
T Consensus 478 -----~~v~~~~~~l~~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 478 -----PKVLSYLDVLRDKAPVGNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp -----TTEEEHHHHHTSCCCCCSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred -----CcEeeHHHHhhCCCCCCCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 245665555444456789999999999999999999999987653
No 79
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.79 E-value=1.4e-19 Score=177.83 Aligned_cols=168 Identities=17% Similarity=0.184 Sum_probs=118.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..+||+|||||++|+++|..|++.|++|+|||+++.+||.|.... .+ +.+.....+.+
T Consensus 388 ~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~-------------~~---------pg~~~~~~~~~ 445 (729)
T 1o94_A 388 NKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVA-------------AL---------PGLGEWSYHRD 445 (729)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHT-------------TS---------TTCGGGHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecc-------------cC---------CChHHHHHHHH
Confidence 357999999999999999999999999999999999999876420 00 11112245666
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC------CCCCCCCCc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN------PFTPDIRGL 159 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~------p~~p~~~g~ 159 (325)
|+...++.+. ..+..++.+.. + ..++.++. .. +.+|+||+|||.... |..|++||.
T Consensus 446 ~~~~~i~~~~-----~~~~~~v~i~~----~-~~v~~~~~-------~~-~~~d~vviAtG~~~~~~~~~~p~~~~ipG~ 507 (729)
T 1o94_A 446 YRETQITKLL-----KKNKESQLALG----Q-KPMTADDV-------LQ-YGADKVIIATGARWNTDGTNCLTHDPIPGA 507 (729)
T ss_dssp HHHHHHHHHH-----HHSTTCEEECS----C-CCCCHHHH-------HT-SCCSEEEECCCEEECSSCCCTTTSSCCTTC
T ss_pred HHHHHHHHhh-----cccCCceEEEe----C-eEEehhhc-------cc-cCCCEEEEcCCCCcccccccCccCCCCCCc
Confidence 7666555431 00111111211 1 11333222 34 789999999995422 567889998
Q ss_pred cccccCCCCCccEEecCCCCCCCCCCCCeEEEEC--cCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 160 CSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVG--SGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG--~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+.+ .+.++++.++.+.....+++|+||| +|.+|+|+|..|++.|.+||+++|++
T Consensus 508 ~~~------~~~v~~~~~~l~~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 508 DAS------LPDQLTPEQVMDGKKKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CTT------STTEECHHHHHHCCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred ccc------CCCEEEHHHHhcCCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 865 5566776655544455789999999 99999999999999999999999988
No 80
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.77 E-value=1.1e-18 Score=168.42 Aligned_cols=197 Identities=18% Similarity=0.231 Sum_probs=121.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC-C-------CCCCccCC-CCCCceEeecCC-------CccCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-N-------CYASIWKK-YSYDRLRLHLAK-------QFCQLPHLP 69 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~-~-------~~Gg~w~~-~~y~~~~~~~~~-------~~~~~~~~~ 69 (325)
..+||+||||||+|+++|..|++.|.+|+|||+. + .+||+|.. .++|...+.... ....+. ..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g-~~ 184 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFG-WS 184 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTT-CC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCC-cc
Confidence 4589999999999999999999999999999973 2 36776532 111111110000 000000 00
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHc-----------CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEe
Q 020533 70 FPSSYPMFVSRAQFIEHLDHYVSHF-----------NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSG 138 (325)
Q Consensus 70 ~~~~~~~~~~~~~~~~yl~~~a~~~-----------~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~a 138 (325)
.+.. .......++.+|+.++++.+ ++. ........++ .|.+.....++ +..+ +.|
T Consensus 185 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~---~~~~~~~~~~------~~~v~v~~~~g---~~~~-~~~ 250 (598)
T 2x8g_A 185 LDRS-KISHNWSTMVEGVQSHIGSLNWGYKVALRDNQVT---YLNAKGRLIS------PHEVQITDKNQ---KVST-ITG 250 (598)
T ss_dssp CCGG-GCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECSEEEEEE------TTEEEEECTTC---CEEE-EEE
T ss_pred ccCC-cCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCcE---EEEEEEEEcC------CCEEEEEeCCC---CeEE-EEe
Confidence 1100 01234567777776655432 222 1222222222 23454433221 2256 899
Q ss_pred CeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEec
Q 020533 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (325)
Q Consensus 139 d~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~ 218 (325)
|+||+||| +.|+.|++||.+.+ .+++.+... ....+++|+|||+|++|+|+|..|++.|.+||+++|+
T Consensus 251 d~lviAtG--s~p~~p~i~G~~~~---------~~~~~~~~~-~~~~~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~ 318 (598)
T 2x8g_A 251 NKIILATG--ERPKYPEIPGAVEY---------GITSDDLFS-LPYFPGKTLVIGASYVALECAGFLASLGGDVTVMVRS 318 (598)
T ss_dssp EEEEECCC--EEECCCSSTTHHHH---------CEEHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CEEEEeCC--CCCCCCCCCCcccc---------eEcHHHHhh-CccCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC
Confidence 99999999 78899999997654 234433332 2345789999999999999999999999999999998
Q ss_pred CCeeechhhHHHH
Q 020533 219 PVHVLSREMVYLG 231 (325)
Q Consensus 219 ~~~~~p~~~~~~~ 231 (325)
.++|..+..+.
T Consensus 319 --~~l~~~d~~~~ 329 (598)
T 2x8g_A 319 --ILLRGFDQQMA 329 (598)
T ss_dssp --CSSTTSCHHHH
T ss_pred --cCcCcCCHHHH
Confidence 46665444443
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.77 E-value=7.8e-20 Score=170.30 Aligned_cols=161 Identities=17% Similarity=0.169 Sum_probs=116.6
Q ss_pred CCeEEEECCChHHHHHHHHHHh-c------CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSL-Q------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVS 79 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~-~------g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (325)
+++|+|||||++|+++|..|++ . |.+|+|||+.+.+||.|++... +.++.
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv~-----------------------p~~~~ 59 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGVA-----------------------PDHPK 59 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTSC-----------------------TTCTG
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCccccccC-----------------------CCCCC
Confidence 4699999999999999999999 7 9999999999999998864311 12334
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCc
Q 020533 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGL 159 (325)
Q Consensus 80 ~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~ 159 (325)
..++..++.+++++.++.. +.+.++ . . .|++.+ .. +.||+||+|||.. .|+.|++||.
T Consensus 60 ~~~~~~~~~~~~~~~~v~~--~~~v~v-----~---~--~v~~~~--------~~-~~~d~lViAtG~~-~~~~~~ipG~ 117 (456)
T 1lqt_A 60 IKSISKQFEKTAEDPRFRF--FGNVVV-----G---E--HVQPGE--------LS-ERYDAVIYAVGAQ-SDRMLNIPGE 117 (456)
T ss_dssp GGGGHHHHHHHHTSTTEEE--EESCCB-----T---T--TBCHHH--------HH-HHSSEEEECCCCC-EECCCCCTTT
T ss_pred HHHHHHHHHHHHhcCCCEE--EeeEEE-----C---C--EEEECC--------Ce-EeCCEEEEeeCCC-CCCCCCCCCC
Confidence 4567788888887766433 455332 1 1 133332 24 6899999999942 2566788887
Q ss_pred cccccCCCCCccEEecCCC-----------CCCCCCCCCeEEEECcCCCHHHHHHHHhhc--------------------
Q 020533 160 CSFCSSATGTGEVIHSTQY-----------KNGKPYGGKNVLVVGSGNSGMEIALDLANH-------------------- 208 (325)
Q Consensus 160 ~~~~~~~~~~g~~~~~~~~-----------~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~-------------------- 208 (325)
+ + .+ ++++.++ .+...+.+++|+|||+|++|+|+|..|++.
T Consensus 118 ~-~------~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~ 189 (456)
T 1lqt_A 118 D-L------PG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPR 189 (456)
T ss_dssp T-S------TT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTC
T ss_pred C-C------CC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHC
Confidence 6 4 44 4544332 222345789999999999999999999974
Q ss_pred c-CeEEEEEecCC
Q 020533 209 A-AKTSLVVRSPV 220 (325)
Q Consensus 209 ~-~~v~~~~r~~~ 220 (325)
+ .+|+++.|++.
T Consensus 190 g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 190 GIQEVVIVGRRGP 202 (456)
T ss_dssp CCCEEEEECSSCG
T ss_pred CCcEEEEEecCCh
Confidence 4 48999999984
No 82
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.77 E-value=2.1e-19 Score=165.47 Aligned_cols=168 Identities=14% Similarity=0.114 Sum_probs=109.4
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~---~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
++|+|||||++|+++|..|++ .|.+|+|||+++..+..... +. .........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~~~-----------------~~-----~~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRPAL-----------------PH-----VAIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECCSS-----------------CC-----CCSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceeccch-----------------hh-----cccCCcCHHHHH
Confidence 489999999999999999999 89999999999854321000 00 000111222334
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
.++.+.++++++.. +.+ +|++++.+. ..|++.++.+ +..+ +.||+||+|+| +.|..|.+||++..
T Consensus 60 ~~~~~~~~~~gv~~--~~~-~v~~i~~~~----~~V~~~~g~~---~~~~-~~~d~lViAtG--~~~~~~~ipG~~~~-- 124 (409)
T 3h8l_A 60 VDLSEALPEKGIQF--QEG-TVEKIDAKS----SMVYYTKPDG---SMAE-EEYDYVIVGIG--AHLATELVKGWDKY-- 124 (409)
T ss_dssp EEHHHHTGGGTCEE--EEC-EEEEEETTT----TEEEEECTTS---CEEE-EECSEEEECCC--CEECGGGSBTHHHH--
T ss_pred HHHHHHHhhCCeEE--EEe-eEEEEeCCC----CEEEEccCCc---ccce-eeCCEEEECCC--CCcCccCCCChhhc--
Confidence 55666666777653 555 888887654 3566665433 2367 89999999999 67888888887643
Q ss_pred CCCCCccEEecCCCCCCCCCC------CCeEEEECcC-------------------C------CHHHHHHHH----hhcc
Q 020533 165 SATGTGEVIHSTQYKNGKPYG------GKNVLVVGSG-------------------N------SGMEIALDL----ANHA 209 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~------~~~v~VvG~G-------------------~------s~~e~a~~l----~~~~ 209 (325)
..+...+.+...+. .++++|||+| . .++|+|..+ .+.|
T Consensus 125 -------~~~~~~~~~~~~~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~~~e~a~~~~~~l~~~g 197 (409)
T 3h8l_A 125 -------GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKG 197 (409)
T ss_dssp -------CEESSSTTHHHHHHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHHHHHHHHHHHHHHHTTT
T ss_pred -------CcCcCCHHHHHHHHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCHHHHHHHHHHHHHHHcC
Confidence 23333333221111 2567799999 2 267877554 4556
Q ss_pred ----CeEEEEEecC
Q 020533 210 ----AKTSLVVRSP 219 (325)
Q Consensus 210 ----~~v~~~~r~~ 219 (325)
.+|+++.+.+
T Consensus 198 ~~~~~~v~~~~~~~ 211 (409)
T 3h8l_A 198 MLDKVHVTVFSPGE 211 (409)
T ss_dssp CTTTEEEEEECSSS
T ss_pred CCCCeEEEEEeCCc
Confidence 3799998887
No 83
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.76 E-value=2.6e-19 Score=167.00 Aligned_cols=164 Identities=16% Similarity=0.160 Sum_probs=117.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
.+++|+|||||++|+.+|..|++.| .+|+|||+.+.+||.|+.... +.++...++
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~ 61 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNV 61 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGH
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHH
Confidence 4679999999999999999999998 899999999999988864311 122233467
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
..++.++++++++.. ++++.|. . .|++.+ .. +.||+||+|||.. .++.|++||.+ .
T Consensus 62 ~~~~~~~~~~~gv~~--~~~~~v~--------~--~V~~~~--------~~-~~~d~lVlAtGs~-~~~~~~ipG~~-~- 117 (460)
T 1cjc_A 62 INTFTQTARSDRCAF--YGNVEVG--------R--DVTVQE--------LQ-DAYHAVVLSYGAE-DHQALDIPGEE-L- 117 (460)
T ss_dssp HHHHHHHHTSTTEEE--EBSCCBT--------T--TBCHHH--------HH-HHSSEEEECCCCC-EECCCCCTTTT-S-
T ss_pred HHHHHHHHHhCCcEE--EeeeEEe--------e--EEEecc--------ce-EEcCEEEEecCcC-CCCCCCCCCCC-C-
Confidence 788888887777543 6665541 1 133322 24 6899999999943 23677899875 2
Q ss_pred cCCCCCccEEecCCC----------CCC-CCCCCCeEEEECcCCCHHHHHHHHh--------------------hccC-e
Q 020533 164 SSATGTGEVIHSTQY----------KNG-KPYGGKNVLVVGSGNSGMEIALDLA--------------------NHAA-K 211 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~----------~~~-~~~~~~~v~VvG~G~s~~e~a~~l~--------------------~~~~-~ 211 (325)
.+ ++++.++ ... ..+.+++|+|||+|++|+|+|..|+ +.+. +
T Consensus 118 -----~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~ 191 (460)
T 1cjc_A 118 -----PG-VFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKT 191 (460)
T ss_dssp -----TT-EEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCE
T ss_pred -----Cc-EEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcE
Confidence 33 4443322 111 1346899999999999999999999 4565 7
Q ss_pred EEEEEecCCee
Q 020533 212 TSLVVRSPVHV 222 (325)
Q Consensus 212 v~~~~r~~~~~ 222 (325)
|+++.|++...
T Consensus 192 V~lv~r~~~~~ 202 (460)
T 1cjc_A 192 VWIVGRRGPLQ 202 (460)
T ss_dssp EEEECSSCGGG
T ss_pred EEEEEcCChHh
Confidence 99999998543
No 84
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.76 E-value=7.7e-18 Score=169.94 Aligned_cols=178 Identities=16% Similarity=0.156 Sum_probs=120.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|. +. +...+ . . ....++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~-~~-~k~~i---------~---------~-~~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL-DT-AGEQI---------D---------G-MDSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG-GS-SCCEE---------T---------T-EEHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec-cC-Ccccc---------C---------C-CCHHHHHHH
Confidence 47899999999999999999999999999999999999887 21 10000 0 0 112344455
Q ss_pred HHHHHHHc-CCCceeeeCeEEEEEEEcCC-------CCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCC
Q 020533 87 LDHYVSHF-NIGPSIRYQRSVESASYDEA-------TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRG 158 (325)
Q Consensus 87 l~~~a~~~-~l~~~i~~~~~V~~i~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g 158 (325)
+.+.+.++ ++ .++.+++|.++..... .+.+.+...+.... ..... +.||+||+||| +.|+.|++||
T Consensus 187 ~~~~l~~~~~v--~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~-~~~~~-i~~d~lVlATG--s~p~~~~ipG 260 (965)
T 2gag_A 187 VTSELAEAEET--THLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSR-ERIWH-IRAKQVVLATG--AHERPIVFEN 260 (965)
T ss_dssp HHHHHHHSTTE--EEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCS-EEEEE-EEEEEEEECCC--EEECCCCCBT
T ss_pred HHHHHhhcCCc--EEEeCCEEEeeecCCceeeeEeecccccccccccCCC-CceEE-EECCEEEECCC--CccCCCCCCC
Confidence 54445554 54 4588888988764320 00111111000000 01247 89999999999 6678888888
Q ss_pred ccccccCCCCCccEEecCCC---CC-CCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 159 LCSFCSSATGTGEVIHSTQY---KN-GKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 159 ~~~~~~~~~~~g~~~~~~~~---~~-~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+. .| ++++... .+ .....+++|+|||+|.+|+|+|..|++.|.+|+++.+++
T Consensus 261 ~~~-------~g-v~~~~~~~~~l~~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~ 317 (965)
T 2gag_A 261 NDR-------PG-IMLAGAVRSYLNRYGVRAGARIAVATTNDSAYELVRELAATGGVVAVIDARS 317 (965)
T ss_dssp CCS-------TT-EEEHHHHHHHHHTTCEESCSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCS
T ss_pred CCC-------CC-EEEhHHHHHHHHhcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCC
Confidence 753 33 4443211 11 123457999999999999999999999999999999998
No 85
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.76 E-value=3e-18 Score=162.19 Aligned_cols=205 Identities=15% Similarity=0.144 Sum_probs=120.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC--------CCCCccCC-CCCCceEeecCCCccC-----CCCCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN--------CYASIWKK-YSYDRLRLHLAKQFCQ-----LPHLPFPS 72 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~--------~~Gg~w~~-~~y~~~~~~~~~~~~~-----~~~~~~~~ 72 (325)
.|||+||||||+|+.+|.++++.|.+|+|+|+.. .+||++-+ .+.|+-.+......+. ...+.+..
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~ 121 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF 121 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc
Confidence 3799999999999999999999999999999743 47886532 2222111000000000 00000000
Q ss_pred CCCCCCCHHHHHHHHHHH-----------HHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeE
Q 020533 73 SYPMFVSRAQFIEHLDHY-----------VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 73 ~~~~~~~~~~~~~yl~~~-----------a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (325)
. ..-....++.++.++. .++.++. .+.....-++ .+...|......+ .... ++++++
T Consensus 122 ~-~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~---~i~G~a~f~~----~~~v~V~~~~~~~---~~~~-i~a~~i 189 (542)
T 4b1b_A 122 D-NLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVK---YINGLAKLKD----KNTVSYYLKGDLS---KEET-VTGKYI 189 (542)
T ss_dssp E-EEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTCE---EECEEEEEEE----TTEEEEEEC--CC---CEEE-EEEEEE
T ss_pred C-cccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCE---EEeeeEEEcC----CCcceEeecccCC---ceEE-EeeeeE
Confidence 0 0011233444443333 2333433 2222222221 2334444443222 2267 999999
Q ss_pred EEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCe
Q 020533 142 VVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVH 221 (325)
Q Consensus 142 IiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~ 221 (325)
|+||| +.|.+|+.++... ..++.+.+..+ .+..+++++|||+|++|+|+|..++++|.+||++.|+.
T Consensus 190 iIATG--s~P~~P~~~~~~~--------~~~~ts~~~l~-l~~lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~-- 256 (542)
T 4b1b_A 190 LIATG--CRPHIPDDVEGAK--------ELSITSDDIFS-LKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI-- 256 (542)
T ss_dssp EECCC--EEECCCSSSBTHH--------HHCBCHHHHTT-CSSCCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC--
T ss_pred EeccC--CCCCCCCcccCCC--------ccccCchhhhc-cccCCceEEEECCCHHHHHHHHHHHhcCCeEEEecccc--
Confidence 99999 8898886543322 12344444444 33346899999999999999999999999999998754
Q ss_pred eechhhHHHHHHHHh
Q 020533 222 VLSREMVYLGVVLFK 236 (325)
Q Consensus 222 ~~p~~~~~~~~~~~~ 236 (325)
+||..+.+++..+..
T Consensus 257 ~L~~~D~ei~~~l~~ 271 (542)
T 4b1b_A 257 VLRGFDQQCAVKVKL 271 (542)
T ss_dssp SSTTSCHHHHHHHHH
T ss_pred cccccchhHHHHHHH
Confidence 688887776655443
No 86
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.74 E-value=2.6e-18 Score=159.49 Aligned_cols=168 Identities=17% Similarity=0.261 Sum_probs=113.5
Q ss_pred CCeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~---~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
.++|+|||||++|+++|..|++ .|.+|+|||+++... |.. . ++..........++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~-------~~~-------------~--~~~~~~g~~~~~~~ 61 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ-------FVP-------------S--NPWVGVGWKERDDI 61 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE-------CGG-------------G--HHHHHHTSSCHHHH
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc-------ccC-------------C--ccccccCccCHHHH
Confidence 3699999999999999999999 799999999998431 000 0 00000122344566
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccc
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFC 163 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~ 163 (325)
..++.+.+++.++. ....+|++++.+. . .|++.++ .+ +.||+||+||| +.|+.|.+||++.+
T Consensus 62 ~~~l~~~~~~~gv~---~~~~~v~~id~~~--~--~V~~~~g-------~~-i~~d~lviAtG--~~~~~~~ipG~~~~- 123 (437)
T 3sx6_A 62 AFPIRHYVERKGIH---FIAQSAEQIDAEA--Q--NITLADG-------NT-VHYDYLMIATG--PKLAFENVPGSDPH- 123 (437)
T ss_dssp EEECHHHHHTTTCE---EECSCEEEEETTT--T--EEEETTS-------CE-EECSEEEECCC--CEECGGGSTTCSTT-
T ss_pred HHHHHHHHHHCCCE---EEEeEEEEEEcCC--C--EEEECCC-------CE-EECCEEEECCC--CCcCcccCCCCCcc-
Confidence 66677777777765 3457888887653 2 5666654 56 89999999999 67888889998764
Q ss_pred cCCCCCccEEecCCCCCCCC--------CCCCeEEEECcCCCH------HHHHHH----HhhccCe-----EEEEEecC
Q 020533 164 SSATGTGEVIHSTQYKNGKP--------YGGKNVLVVGSGNSG------MEIALD----LANHAAK-----TSLVVRSP 219 (325)
Q Consensus 164 ~~~~~~g~~~~~~~~~~~~~--------~~~~~v~VvG~G~s~------~e~a~~----l~~~~~~-----v~~~~r~~ 219 (325)
.+..++...+.+... .++++++|||+|.+| +|+|.. +.+.|.+ |+++.+.+
T Consensus 124 -----~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~ 197 (437)
T 3sx6_A 124 -----EGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEP 197 (437)
T ss_dssp -----TSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSS
T ss_pred -----cCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCc
Confidence 344444333322111 124567899996654 888844 4455653 99999887
No 87
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.74 E-value=1.9e-19 Score=169.56 Aligned_cols=187 Identities=12% Similarity=0.120 Sum_probs=108.0
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccC--CCCC-CceEeecCCCccCCCCCCCCC------C
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWK--KYSY-DRLRLHLAKQFCQLPHLPFPS------S 73 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~--~~~y-~~~~~~~~~~~~~~~~~~~~~------~ 73 (325)
+..+||+|||||++|+++|..|++. +.+|+|||+++.++.... ...+ .+...... ....+..++... .
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y~r~~lsk~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 87 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVT-KTLRFKQWNGKERSIYFQP 87 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCBCSGGGGTGGGCC--CTHH-HHCEEECTTSCEEESBSSC
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCCCCCCCCHHhhcCCccchh-hcccccccccccccccccc
Confidence 3457999999999999999999887 789999999987541100 0000 00000000 000000000000 0
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 74 ~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
...+....++.+ ..+.+ ..++++++|.+++... ++|++.++ .+ +.||+||+||| +.|+.
T Consensus 88 ~~~~~~~~~l~~-----~~~~g--v~~~~g~~v~~id~~~----~~V~~~~g-------~~-i~yd~lviATG--s~p~~ 146 (493)
T 1m6i_A 88 PSFYVSAQDLPH-----IENGG--VAVLTGKKVVQLDVRD----NMVKLNDG-------SQ-ITYEKCLIATG--GTPRS 146 (493)
T ss_dssp GGGSBCTTTTTT-----STTCE--EEEEETCCEEEEEGGG----TEEEETTS-------CE-EEEEEEEECCC--EEECC
T ss_pred hHhhcchhhhhh-----hhcCC--eEEEcCCEEEEEECCC----CEEEECCC-------CE-EECCEEEECCC--CCCCC
Confidence 000111111100 11233 4458888999988653 46777653 56 89999999999 67776
Q ss_pred CCCCCcc--ccccCCCCCccEEecCCCCCC-----CCCCCCeEEEECcCCCHHHHHHHHhh----ccCeEEEEEecC
Q 020533 154 PDIRGLC--SFCSSATGTGEVIHSTQYKNG-----KPYGGKNVLVVGSGNSGMEIALDLAN----HAAKTSLVVRSP 219 (325)
Q Consensus 154 p~~~g~~--~~~~~~~~~g~~~~~~~~~~~-----~~~~~~~v~VvG~G~s~~e~a~~l~~----~~~~v~~~~r~~ 219 (325)
|++++.. .+ ...+.......+. ....+++|+|||+|.+|+|+|..|++ .|.+|+++.+.+
T Consensus 147 ~~~~~~~~~~~------~~~v~~~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~ 217 (493)
T 1m6i_A 147 LSAIDRAGAEV------KSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEK 217 (493)
T ss_dssp CHHHHTSCHHH------HHTEEECCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCcccccccc------cCceEEEcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCc
Confidence 6654421 11 1222222211110 11247999999999999999999987 467899998876
No 88
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.73 E-value=3.7e-18 Score=160.77 Aligned_cols=185 Identities=20% Similarity=0.286 Sum_probs=108.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++++|||||||++|+.+|+.|.+.+++|+|||+++.. .|. | .+++.. .......++..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~--~~~-----------P-lL~~va--------~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF--LFT-----------P-LLPSAP--------VGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE--ECG-----------G-GGGGTT--------TTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc--ccc-----------c-chhHHh--------hccccHHHhhh
Confidence 4578999999999999999999999999999998742 010 0 000000 00011112211
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeec-------------CCCCceeEEEEEeCeEEEcccCCCCCC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNL-------------LSPGREIEEYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~-------------~~~~~~~~~~~~ad~vIiAtG~~~~p~ 152 (325)
.+...+....-... +...+|++++.+. ...++..... ..+ +..+ +.||+||+||| +.|+
T Consensus 99 p~~~~~~~~~~~v~-~~~~~v~~ID~~~--k~V~l~~~~~~~~~~~~~~~~~~~~~--~~~~-i~YD~LViAtG--s~~~ 170 (502)
T 4g6h_A 99 PIVNFALKKKGNVT-YYEAEATSINPDR--NTVTIKSLSAVSQLYQPENHLGLHQA--EPAE-IKYDYLISAVG--AEPN 170 (502)
T ss_dssp EHHHHHTTCSSCEE-EEEEEEEEEEGGG--TEEEEEEEEEEEECSSSCCCCCCCTT--CCEE-EECSEEEECCC--CEEC
T ss_pred hHHHHHHhhcCCeE-EEEEEEEEEEhhh--CEEEEeecccceeecccccccccccC--CceE-EeCCEEEEcCC--cccc
Confidence 22222221111111 3456788887754 4333332110 000 2267 99999999999 7888
Q ss_pred CCCCCCccccccCCCCCccEEecCC-----------------C-CCC--CCCCCCeEEEECcCCCHHHHHHHHhhcc---
Q 020533 153 TPDIRGLCSFCSSATGTGEVIHSTQ-----------------Y-KNG--KPYGGKNVLVVGSGNSGMEIALDLANHA--- 209 (325)
Q Consensus 153 ~p~~~g~~~~~~~~~~~g~~~~~~~-----------------~-~~~--~~~~~~~v~VvG~G~s~~e~a~~l~~~~--- 209 (325)
.+++||++++ ...+.+.. . ... ......+++|||+|.+|+|+|.+|++.+
T Consensus 171 ~~~ipG~~e~-------a~~l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~vvVvGgG~tGvE~A~~l~~~~~~~ 243 (502)
T 4g6h_A 171 TFGIPGVTDY-------GHFLKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLSIVVVGGGPTGVEAAGELQDYVHQD 243 (502)
T ss_dssp CTTCTTHHHH-------CEECSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTEEEEECCSHHHHHHHHHHHHHHHHT
T ss_pred cCCccCcccc-------cCCCCCHHHHHHHHHHHHHHHHHHhcccccchhhccccceEEECCCcchhhhHHHHHHHHHHH
Confidence 8999998653 11111000 0 000 0012357999999999999999998653
Q ss_pred -----------CeEEEEEecCCeeechhhH
Q 020533 210 -----------AKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 210 -----------~~v~~~~r~~~~~~p~~~~ 228 (325)
.+|+++.+.+ .++|....
T Consensus 244 l~~~~~~~~~~~~V~lve~~~-~il~~~~~ 272 (502)
T 4g6h_A 244 LRKFLPALAEEVQIHLVEALP-IVLNMFEK 272 (502)
T ss_dssp HHHHCHHHHHHCEEEEECSSS-SSSTTSCH
T ss_pred HHhhcccccccceeEEecccc-ccccCCCH
Confidence 4688888888 45554433
No 89
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.70 E-value=6.6e-18 Score=171.49 Aligned_cols=171 Identities=18% Similarity=0.271 Sum_probs=117.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
.+||+|||||++|+++|..|+++|+ +|+|||+.+.+||.+... .+. |....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~---------------ip~---------~~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSE---------------IPQ---------FRLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHT---------------SCT---------TTSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCcccccc---------------CCc---------ccCCHHHHH
Confidence 5799999999999999999999999 799999999999985421 111 111235667
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCC-CCcccccc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI-RGLCSFCS 164 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~-~g~~~~~~ 164 (325)
+..+.++++++.. ++++.+.. +.+++.+. .. +.||+||+|||.. .|+.+++ +|++..
T Consensus 243 ~~~~~~~~~gv~~--~~~~~v~~---------~~v~~~~~-------~~-~~~d~vvlAtGa~-~p~~l~~~~G~~~~-- 300 (1025)
T 1gte_A 243 FEIELMKDLGVKI--ICGKSLSE---------NEITLNTL-------KE-EGYKAAFIGIGLP-EPKTDDIFQGLTQD-- 300 (1025)
T ss_dssp HHHHHHHTTTCEE--EESCCBST---------TSBCHHHH-------HH-TTCCEEEECCCCC-EECCCGGGTTCCTT--
T ss_pred HHHHHHHHCCcEE--EcccEecc---------ceEEhhhc-------Cc-cCCCEEEEecCCC-CCCCCCCCCCCCCC--
Confidence 7777778777554 77765521 12333332 34 6789999999942 4655543 455432
Q ss_pred CCCCCccEEecCCC---------------CCCCCCCCCeEEEECcCCCHHHHHHHHhhccC-eEEEEEecCCeeechhhH
Q 020533 165 SATGTGEVIHSTQY---------------KNGKPYGGKNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 165 ~~~~~g~~~~~~~~---------------~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~-~v~~~~r~~~~~~p~~~~ 228 (325)
.+ ++++.++ .......+++|+|||+|++|+|+|..+.+.|. +||+++|++...+|....
T Consensus 301 ----~g-v~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~~~~~~~ 375 (1025)
T 1gte_A 301 ----QG-FYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVNIRAVPE 375 (1025)
T ss_dssp ----TT-EEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGGCCSCHH
T ss_pred ----CC-EEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhhCCCCHH
Confidence 22 3332221 11112346799999999999999999999996 899999998656665443
No 90
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.64 E-value=6.6e-16 Score=145.38 Aligned_cols=153 Identities=17% Similarity=0.139 Sum_probs=102.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++. .+|+|||+++.+||.|....+. .+.+ +. ...++.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~---------~~g~---------~~--~~~~~~-- 164 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK---------QEGF---------NK--DSRKVV-- 164 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE---------ETTT---------TE--EHHHHH--
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc---------cCCC---------CC--CHHHHH--
Confidence 35899999999999999999999 9999999999999987643211 0000 01 233333
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSSA 166 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~~ 166 (325)
..+.+.+.....++++++|.+++.+. ..|.+...+.. +... +.+|+||+||| +.|..|++||.+.
T Consensus 165 -~~l~~~l~~~v~~~~~~~v~~i~~~~--~~~~~~~~~~~----~~~~-~~~d~lvlAtG--a~~~~~~~~g~~~----- 229 (493)
T 1y56_A 165 -EELVGKLNENTKIYLETSALGVFDKG--EYFLVPVVRGD----KLIE-ILAKRVVLATG--AIDSTMLFENNDM----- 229 (493)
T ss_dssp -HHHHHTCCTTEEEETTEEECCCEECS--SSEEEEEEETT----EEEE-EEESCEEECCC--EEECCCCCTTTTS-----
T ss_pred -HHHHHHHhcCCEEEcCCEEEEEEcCC--cEEEEEEecCC----eEEE-EECCEEEECCC--CCccCCCCCCCCC-----
Confidence 33333332234457889998887754 55665543321 2247 89999999999 6777888888753
Q ss_pred CCCccEEecCCCC---C-CCCCCCCeEEEECcCCCHHH
Q 020533 167 TGTGEVIHSTQYK---N-GKPYGGKNVLVVGSGNSGME 200 (325)
Q Consensus 167 ~~~g~~~~~~~~~---~-~~~~~~~~v~VvG~G~s~~e 200 (325)
.+ +++...+. + .....+++++|||+|.+|+|
T Consensus 230 --~g-v~~~~~~~~~~~~~~~~~~~~vvViGgG~~gle 264 (493)
T 1y56_A 230 --PG-VFRRDFALEVMNVWEVAPGRKVAVTGSKADEVI 264 (493)
T ss_dssp --TT-EEEHHHHHHHHHTSCBCSCSEEEEESTTHHHHH
T ss_pred --CC-EEEcHHHHHHHHhcccCCCCEEEEECCCHHHHH
Confidence 33 33332211 1 12345799999999999998
No 91
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.57 E-value=6.6e-15 Score=134.87 Aligned_cols=135 Identities=16% Similarity=0.163 Sum_probs=88.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC---------CCCCc---eEeecCCCccC----C-----
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK---------YSYDR---LRLHLAKQFCQ----L----- 65 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~---------~~y~~---~~~~~~~~~~~----~----- 65 (325)
.+||+|||||++|+++|..|+++|.+|+|+|+++.+|+.|.. +.+.. .....+..... +
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 83 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNWDF 83 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHHHH
Confidence 479999999999999999999999999999999988654321 10100 00000000000 0
Q ss_pred ------CCCCC--CCCCCCCC--CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCC--CCcEEEEEeecCCCCceeE
Q 020533 66 ------PHLPF--PSSYPMFV--SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIE 133 (325)
Q Consensus 66 ------~~~~~--~~~~~~~~--~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~ 133 (325)
...++ ..+...|+ ...++.+++.+.+++.++. ++++++|+++..+++ .+.|.|++.+ .
T Consensus 84 ~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv~--i~~~~~v~~i~~~~~g~~~~~~v~~~~--------g 153 (401)
T 2gqf_A 84 ISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGAK--ILLRSEVSQVERIQNDEKVRFVLQVNS--------T 153 (401)
T ss_dssp HHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTCE--EECSCCEEEEEECCSCSSCCEEEEETT--------E
T ss_pred HHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCCE--EEeCCEEEEEEcccCcCCCeEEEEECC--------C
Confidence 00000 01111122 6788889999999998865 499999999987521 2458777643 4
Q ss_pred EEEEeCeEEEcccCCCCCC
Q 020533 134 EYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 134 ~~~~ad~vIiAtG~~~~p~ 152 (325)
+ ++||.||+|||.++.|.
T Consensus 154 ~-i~ad~VVlAtG~~s~p~ 171 (401)
T 2gqf_A 154 Q-WQCKNLIVATGGLSMPG 171 (401)
T ss_dssp E-EEESEEEECCCCSSCGG
T ss_pred E-EECCEEEECCCCccCCC
Confidence 6 89999999999876553
No 92
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.55 E-value=1.6e-16 Score=147.07 Aligned_cols=163 Identities=19% Similarity=0.221 Sum_probs=95.0
Q ss_pred CeEEEECCChHHHHHHHHHHh--cCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~--~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
+||+|||||++|+++|..|++ .|.+|+|||+++..++.... +.. . .......++..
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~---~~~----~---------------~g~~~~~~~~~ 60 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF---PHL----A---------------MGWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH---HHH----H---------------HTCSCGGGSEE
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc---chh----c---------------cCccCHHHHHH
Confidence 689999999999999999999 78999999999876532100 000 0 00001111122
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccccccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCSS 165 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~~ 165 (325)
.+.+.+++.++.. + ..+|+.++.+. . .|++.++ .+ +.+|+||+||| +.|..| |+..
T Consensus 61 ~~~~~~~~~gv~~--~-~~~v~~id~~~--~--~v~~~~g-------~~-i~~d~liiAtG--~~~~~p---g~~~---- 116 (430)
T 3h28_A 61 PLAPLLPKFNIEF--I-NEKAESIDPDA--N--TVTTQSG-------KK-IEYDYLVIATG--PKLVFG---AEGQ---- 116 (430)
T ss_dssp ESTTTGGGGTEEE--E-CSCEEEEETTT--T--EEEETTC-------CE-EECSEEEECCC--CEEECC---SBTH----
T ss_pred HHHHHHHhcCCEE--E-EEEEEEEECCC--C--EEEECCC-------cE-EECCEEEEcCC--cccccC---CCCC----
Confidence 2233344456542 4 35788887543 2 5666543 56 89999999999 556555 3321
Q ss_pred CCCCccEEecCCCCCCC--------CCCCCeEEEECcCCCH------HHHHHHHh----hcc----CeEEEEEecC
Q 020533 166 ATGTGEVIHSTQYKNGK--------PYGGKNVLVVGSGNSG------MEIALDLA----NHA----AKTSLVVRSP 219 (325)
Q Consensus 166 ~~~~g~~~~~~~~~~~~--------~~~~~~v~VvG~G~s~------~e~a~~l~----~~~----~~v~~~~r~~ 219 (325)
.+...+...+.+.. ..++++++|||+|.+| +|+|..++ +.| .+|+++.+.+
T Consensus 117 ---~g~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~ 189 (430)
T 3h28_A 117 ---EENSTSICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEP 189 (430)
T ss_dssp ---HHHSCCCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSS
T ss_pred ---cCCccCcCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCc
Confidence 01111111111100 0124567899998664 88885544 445 3688888776
No 93
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.43 E-value=6.2e-13 Score=122.25 Aligned_cols=134 Identities=16% Similarity=0.145 Sum_probs=89.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC------------CCCceEeecCCCcc----CCC---
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY------------SYDRLRLHLAKQFC----QLP--- 66 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~------------~y~~~~~~~~~~~~----~~~--- 66 (325)
..+||+|||||++|+++|..|++.|.+|+|+|+++.+|+.+... .........+.... .+.
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 35799999999999999999999999999999999887644110 00000000000000 000
Q ss_pred --------CCCC--CCCCCC--CCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEE
Q 020533 67 --------HLPF--PSSYPM--FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEE 134 (325)
Q Consensus 67 --------~~~~--~~~~~~--~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~ 134 (325)
..++ ...... .....++.+++.+.+++.++.. +++++|++++.++ +.|.|.+.+ .+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv~i--~~~~~V~~i~~~~--~~~~V~~~~--------g~ 173 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGVQL--RLETSIGEVERTA--SGFRVTTSA--------GT 173 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETT--------EE
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECC--------cE
Confidence 0000 000001 1356789999999999888654 9999999998765 568887764 46
Q ss_pred EEEeCeEEEcccCCCCCC
Q 020533 135 YYSGRFLVVASGETTNPF 152 (325)
Q Consensus 135 ~~~ad~vIiAtG~~~~p~ 152 (325)
+.||.||+|+|.++.|.
T Consensus 174 -i~ad~VIlAtG~~S~p~ 190 (417)
T 3v76_A 174 -VDAASLVVASGGKSIPK 190 (417)
T ss_dssp -EEESEEEECCCCSSCGG
T ss_pred -EEeeEEEECCCCccCCC
Confidence 89999999999887554
No 94
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.43 E-value=1.5e-13 Score=125.94 Aligned_cols=116 Identities=22% Similarity=0.235 Sum_probs=72.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
.++|+|||||++|+++|.+|++.+ .+|+|||+++....... ...-.. ...+.+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p~-------------~~~v~~---------g~~~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCYM-------------SNEVIG---------GDRELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECSTT-------------HHHHHH---------TSSCGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCccC-------------HHHHhc---------CCCCHHHHh
Confidence 468999999999999999999876 58999999875221000 000000 000000110
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~ 162 (325)
.-+.+ +...++. +...+|++++.+. -.|.+.++ .+ +.||+||+||| +.+..+.+||+++.
T Consensus 60 ~~~~~-~~~~gv~---~i~~~v~~id~~~----~~v~~~~g-------~~-i~yd~LviAtG--~~~~~~~i~G~~e~ 119 (401)
T 3vrd_B 60 VGYDG-LRAHGIQ---VVHDSALGIDPDK----KLVKTAGG-------AE-FAYDRCVVAPG--IDLLYDKIEGYSEA 119 (401)
T ss_dssp ECSHH-HHHTTCE---EECSCEEEEETTT----TEEEETTS-------CE-EECSEEEECCC--EEECGGGSBTCCSG
T ss_pred hCHHH-HHHCCCE---EEEeEEEEEEccC----cEEEeccc-------ce-eecceeeeccC--CccccCCccCchhh
Confidence 01111 2234554 4556788887654 24666554 57 89999999999 77888889998754
No 95
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.41 E-value=1.3e-12 Score=119.24 Aligned_cols=134 Identities=13% Similarity=0.139 Sum_probs=90.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC----------------------CCceEeecCCCc--
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS----------------------YDRLRLHLAKQF-- 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~----------------------y~~~~~~~~~~~-- 62 (325)
++||+|||||++|+++|..|++.|++|+|+|+++.+|+.+.... +.+.....+...
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 37999999999999999999999999999999987765332210 011111111110
Q ss_pred cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeE
Q 020533 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~v 141 (325)
..+..............+..+.++|.+.+++.++. ++++++|++++.++ +.+. |++..... ..+ +.+|.|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~~--~~v~gv~~~~~~~----~~~-~~a~~v 154 (397)
T 3cgv_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGAD--VWVKSPALGVIKEN--GKVAGAKIRHNNE----IVD-VRAKMV 154 (397)
T ss_dssp EEEC-----CCCEEEECHHHHHHHHHHHHHHHTCE--EESSCCEEEEEEET--TEEEEEEEEETTE----EEE-EEEEEE
T ss_pred EEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCE--EEECCEEEEEEEeC--CEEEEEEEEECCe----EEE-EEcCEE
Confidence 11111100011122357889999999999988855 49999999998864 6676 77754321 267 999999
Q ss_pred EEcccCCC
Q 020533 142 VVASGETT 149 (325)
Q Consensus 142 IiAtG~~~ 149 (325)
|.|+|.++
T Consensus 155 V~A~G~~s 162 (397)
T 3cgv_A 155 IAADGFES 162 (397)
T ss_dssp EECCCTTC
T ss_pred EECCCcch
Confidence 99999766
No 96
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.40 E-value=2.4e-14 Score=127.64 Aligned_cols=150 Identities=13% Similarity=0.043 Sum_probs=102.3
Q ss_pred CCeEEEECCChHHHHHHHHHHh--cCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSL--QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~--~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
.+||+||||||+||+||.+|++ .|++|+|||+++.+||......+- ++. ..+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~~~~~-----------------~~~--------~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQL-----------------FSA--------MVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCSTT-----------------CCC--------EEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEeCCcc-----------------CCH--------HHHH
Confidence 5799999999999999999975 599999999999999864422110 000 0001
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccccc
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSFCS 164 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~~~ 164 (325)
......++++++.. ..+. . .. ...+.++++++ ..+..+.++|.+.+
T Consensus 120 ~~~~~~~~e~Gv~~--~~~~--------------------~-------~~-~~~~~~~~~~~--~~~~~~~~~g~~~~-- 165 (326)
T 3fpz_A 120 KPAHLFLQELEIPY--EDEG--------------------D-------YV-VVKHAALFIST--VLSKVLQLPNVKLF-- 165 (326)
T ss_dssp TTTHHHHHHTTCCC--EECS--------------------S-------EE-EESCHHHHHHH--HHHHHHTSTTEEEE--
T ss_pred HHHHHHHHHcCCEE--EECC--------------------c-------ce-ecceeEEEEcc--hhhhccccccceee--
Confidence 11223345566543 2110 0 23 44455666666 45566678888777
Q ss_pred CCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 165 SATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 165 ~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+.........+.....+++++|||+|++++|.|..+...+.++++..+..
T Consensus 166 ----~~~~~~~~~~~~~~~~~~~~v~viggg~~av~~a~~~~~~~~~v~i~~~~~ 216 (326)
T 3fpz_A 166 ----NATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCAMDPNVIELAGY 216 (326)
T ss_dssp ----TTEEEEEEEEESSCSSSSCEEEEEEEEEHHHHTCTTSSSCCCCEEEEESCB
T ss_pred ----cccccceeeccCCcccCCCEEEEEccCceeeehhhhhhhccCcEEEEeecc
Confidence 665555444555566778999999999999999999999999998887654
No 97
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.38 E-value=2.6e-12 Score=116.80 Aligned_cols=135 Identities=13% Similarity=0.116 Sum_probs=86.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC----------------------CCCceEeecCCCccC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY----------------------SYDRLRLHLAKQFCQ 64 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~----------------------~y~~~~~~~~~~~~~ 64 (325)
+|||+||||||+|+++|..|+++|++|+||||++.+|...... ...+.++..+.....
T Consensus 4 ~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3oz2_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCceE
Confidence 4899999999999999999999999999999988765321100 011222222211100
Q ss_pred C--CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 65 L--PHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 65 ~--~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
. ..............+.++.++|.+.+.+.|... +++++|+++..++ +..........+ +..+ +++|.||
T Consensus 84 ~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~--~~~~~v~~~~~~~--~~~~~v~~~~~~---~~~~-~~a~~vI 155 (397)
T 3oz2_A 84 IILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADV--WVKSPALGVIKEN--GKVAGAKIRHNN---EIVD-VRAKMVI 155 (397)
T ss_dssp EEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEE--ESSCCEEEEEEET--TEEEEEEEEETT---EEEE-EEEEEEE
T ss_pred eeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEE--eeeeeeeeeeecc--ceeeeeeecccc---cceE-EEEeEEE
Confidence 0 000000011122578899999999999988655 9999999987765 333322222211 3367 8999999
Q ss_pred EcccCCC
Q 020533 143 VASGETT 149 (325)
Q Consensus 143 iAtG~~~ 149 (325)
.|+|.+|
T Consensus 156 gAdG~~S 162 (397)
T 3oz2_A 156 AADGFES 162 (397)
T ss_dssp ECCCTTC
T ss_pred eCCcccc
Confidence 9999765
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.37 E-value=1.9e-12 Score=104.99 Aligned_cols=117 Identities=20% Similarity=0.281 Sum_probs=83.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 87 (325)
+||+|||||++|+.+|..|++.|.+|+++|+.+..-..+ ..+..++.+ +......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~-------------~~~~~~~~~------~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGV-------------SRVPNYPGL------LDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTC-------------SCCCCSTTC------TTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCc-------------hhhhccCCC------cCCCCHHHHHHHH
Confidence 689999999999999999999999999999987321100 000011111 1224578999999
Q ss_pred HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCc
Q 020533 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGL 159 (325)
Q Consensus 88 ~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~ 159 (325)
.+.+++.++.. +++ +|++++.++ +.|.+++.+ .+ +.+|.||+|+|. .|.++...|+
T Consensus 63 ~~~~~~~gv~v--~~~-~v~~i~~~~--~~~~v~~~~--------g~-i~ad~vI~A~G~--~~~~~~~~g~ 118 (180)
T 2ywl_A 63 EAHARRYGAEV--RPG-VVKGVRDMG--GVFEVETEE--------GV-EKAERLLLCTHK--DPTLPSLLGL 118 (180)
T ss_dssp HHHHHHTTCEE--EEC-CCCEEEECS--SSEEEECSS--------CE-EEEEEEEECCTT--CCHHHHHHTC
T ss_pred HHHHHHcCCEE--EeC-EEEEEEEcC--CEEEEEECC--------CE-EEECEEEECCCC--CCCccccCCC
Confidence 99999998654 888 899998764 458777654 25 899999999994 4544333343
No 99
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.36 E-value=4.1e-12 Score=119.63 Aligned_cols=137 Identities=20% Similarity=0.197 Sum_probs=90.4
Q ss_pred CCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC--------------CCCCceEeecCCCccCCCC--
Q 020533 4 QAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK--------------YSYDRLRLHLAKQFCQLPH-- 67 (325)
Q Consensus 4 ~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~--------------~~y~~~~~~~~~~~~~~~~-- 67 (325)
.+..+||+||||||+||++|..|++.|++|+|||+.+.++..-+. ...+.+.-..+.....+..
T Consensus 8 ~~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 87 (500)
T 2qa1_A 8 HRSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLP 87 (500)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEE
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhcccccccccccee
Confidence 445689999999999999999999999999999998765421110 0000000000000000000
Q ss_pred C---CCCCC--CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 68 L---PFPSS--YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 68 ~---~~~~~--~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
+ ..... .....++..+.++|.+.+.+.++. ++++++|++++.++ +.++|++.++.+ ..+ +++|+||
T Consensus 88 ~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~--~~v~v~~~~~~g----~~~-~~a~~vV 158 (500)
T 2qa1_A 88 IDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGAD--IRRGHEVLSLTDDG--AGVTVEVRGPEG----KHT-LRAAYLV 158 (500)
T ss_dssp EEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCE--EEETCEEEEEEEET--TEEEEEEEETTE----EEE-EEESEEE
T ss_pred cccccCCCCCCceeecCHHHHHHHHHHHHHHCCCE--EECCcEEEEEEEcC--CeEEEEEEcCCC----CEE-EEeCEEE
Confidence 0 00000 112346789999999999988754 59999999998875 568888876532 157 8999999
Q ss_pred EcccCCC
Q 020533 143 VASGETT 149 (325)
Q Consensus 143 iAtG~~~ 149 (325)
.|+|.+|
T Consensus 159 gADG~~S 165 (500)
T 2qa1_A 159 GCDGGRS 165 (500)
T ss_dssp ECCCTTC
T ss_pred ECCCcch
Confidence 9999876
No 100
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.36 E-value=7.3e-12 Score=115.24 Aligned_cols=135 Identities=16% Similarity=0.219 Sum_probs=88.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC----CCCccCCCC--------------------CCceEeecCCCc
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC----YASIWKKYS--------------------YDRLRLHLAKQF 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~----~Gg~w~~~~--------------------y~~~~~~~~~~~ 62 (325)
.+||+|||||++|+++|..|++.|++|+|+|+.+. .|....... ..+.........
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 47999999999999999999999999999999863 332221110 011121111111
Q ss_pred cC--CCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeC
Q 020533 63 CQ--LPHLPF-PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (325)
Q Consensus 63 ~~--~~~~~~-~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (325)
.. +..... .........+..+.++|.+.+++.|+. ++++++|++++.++ +.+.+.+...++ +..+ +.+|
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~--i~~~~~v~~i~~~~--~~~~v~v~~~~g---~~~~-~~a~ 156 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVD--VEYEVGVTDIKFFG--TDSVTTIEDING---NKRE-IEAR 156 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCE--EECSEEEEEEEEET--TEEEEEEEETTS---CEEE-EEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC--CEEEEEEEcCCC---CEEE-EEcC
Confidence 11 111000 011123467889999999999988865 49999999998875 456555544322 2247 9999
Q ss_pred eEEEcccCCC
Q 020533 140 FLVVASGETT 149 (325)
Q Consensus 140 ~vIiAtG~~~ 149 (325)
.||.|+|.++
T Consensus 157 ~vV~A~G~~s 166 (421)
T 3nix_A 157 FIIDASGYGR 166 (421)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999765
No 101
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.35 E-value=1.9e-14 Score=133.20 Aligned_cols=115 Identities=21% Similarity=0.248 Sum_probs=69.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
++|+|||||++|+++|..|++.+ .+|+|||+++... |......... ...+.+++..
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~-------~~p~l~~v~~---------------g~~~~~~i~~ 60 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG-------FTPAFPHLAM---------------GWRKFEDISV 60 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE-------CGGGHHHHHH---------------TCSCGGGSEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc-------cCccHHHHhc---------------CCCCHHHhhh
Confidence 47999999999999999999875 6899999987421 1000000000 0000001111
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCcccc
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCSF 162 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~~ 162 (325)
.+.+.+++.++. ....+|++++.+. -+|+++++ .+ +.||+||+|||. .+. +++||.++.
T Consensus 61 ~~~~~~~~~gv~---~i~~~v~~Id~~~----~~V~~~~g-------~~-i~YD~LViAtG~--~~~-~~i~G~~e~ 119 (430)
T 3hyw_A 61 PLAPLLPKFNIE---FINEKAESIDPDA----NTVTTQSG-------KK-IEYDYLVIATGP--KLV-FGAEGQEEN 119 (430)
T ss_dssp ESTTTGGGGTEE---EECSCEEEEETTT----TEEEETTC-------CE-EECSEEEECCCC--EEE-CCSBTHHHH
T ss_pred cHHHHHHHCCcE---EEEeEEEEEECCC----CEEEECCC-------CE-EECCEEEEeCCC--Ccc-CCccCcccC
Confidence 112223344543 3445788887654 35777664 57 899999999994 443 468887653
No 102
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.35 E-value=3.7e-12 Score=121.67 Aligned_cols=134 Identities=15% Similarity=0.081 Sum_probs=87.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-------------------CCceEee---cCCC---
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-------------------YDRLRLH---LAKQ--- 61 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-------------------y~~~~~~---~~~~--- 61 (325)
.+||+|||||++||++|..|++.|++|+|||+.+......+... -...... ....
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~ 128 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIFTQ 128 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBCTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcccc
Confidence 57999999999999999999999999999999876542111100 0000000 0000
Q ss_pred ccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeE
Q 020533 62 FCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (325)
...+.....+........+..+.+.|.+.+++.++.. +++++|++++.++ +.++|++...++ + .+ +++|+|
T Consensus 129 ~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i--~~~~~v~~l~~~~--~~v~v~~~~~~G---~-~~-~~a~~v 199 (570)
T 3fmw_A 129 GLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEI--PRGHEVTRLRQDA--EAVEVTVAGPSG---P-YP-VRARYG 199 (570)
T ss_dssp CCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEEC--CBSCEEEECCBCS--SCEEEEEEETTE---E-EE-EEESEE
T ss_pred cccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC--CeEEEEEEeCCC---c-EE-EEeCEE
Confidence 0111111111111234688999999999998887554 9999999998765 668888754321 1 46 899999
Q ss_pred EEcccCCC
Q 020533 142 VVASGETT 149 (325)
Q Consensus 142 IiAtG~~~ 149 (325)
|.|+|.+|
T Consensus 200 V~ADG~~S 207 (570)
T 3fmw_A 200 VGCDGGRS 207 (570)
T ss_dssp EECSCSSC
T ss_pred EEcCCCCc
Confidence 99999776
No 103
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.34 E-value=2.4e-12 Score=118.04 Aligned_cols=131 Identities=22% Similarity=0.299 Sum_probs=86.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCc-------------------cCC-----CCCCceEeecCC-
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI-------------------WKK-----YSYDRLRLHLAK- 60 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~-------------------w~~-----~~y~~~~~~~~~- 60 (325)
.++||+|||||++||++|..|++.|++|+|||+.+.++.. |.. .....+......
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4689999999999999999999999999999998765311 100 011122221111
Q ss_pred --CccCCCCCCCC---CCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEE
Q 020533 61 --QFCQLPHLPFP---SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (325)
Q Consensus 61 --~~~~~~~~~~~---~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (325)
....++..... ........+.++.++|.+.+.+ ..++++++|++++.++ +.|+|++.++ .+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~- 167 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR----DSVQFGKRVTRCEEDA--DGVTVWFTDG-------SS- 167 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG----GGEEESCCEEEEEEET--TEEEEEETTS-------CE-
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc----CEEEECCEEEEEEecC--CcEEEEEcCC-------CE-
Confidence 11111100000 0112235678899999988876 4569999999998876 6788888764 46
Q ss_pred EEeCeEEEcccCCCC
Q 020533 136 YSGRFLVVASGETTN 150 (325)
Q Consensus 136 ~~ad~vIiAtG~~~~ 150 (325)
+.+|.||.|+|.+|.
T Consensus 168 ~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 168 ASGDLLIAADGSHSA 182 (407)
T ss_dssp EEESEEEECCCTTCS
T ss_pred EeeCEEEECCCcChH
Confidence 899999999998764
No 104
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.34 E-value=1.2e-12 Score=117.39 Aligned_cols=128 Identities=16% Similarity=0.245 Sum_probs=85.5
Q ss_pred CeEEEECCChHHHHHHHHHHh---cCCCeEEEecCCCCCCccCCCC---CCceEeecCCCccCCCCC-------------
Q 020533 8 VEVIMVGAGTSGLATAACLSL---QSIPYVILERENCYASIWKKYS---YDRLRLHLAKQFCQLPHL------------- 68 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~---~g~~v~v~e~~~~~Gg~w~~~~---y~~~~~~~~~~~~~~~~~------------- 68 (325)
+||+|||||++|+++|..|++ .|++|+||||++.+||.|.... +.....+....++.....
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 589999999999999999999 8999999999999999766432 222333322222100000
Q ss_pred ------CCC---------CCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeE
Q 020533 69 ------PFP---------SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE 133 (325)
Q Consensus 69 ------~~~---------~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~ 133 (325)
++. +....|.....+..+++.+++..+. .|+++++|+++++++ +.|+|++.++ .
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~~--~~~~v~~~~g-------~ 150 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLRD--DKWEVSKQTG-------S 150 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEECS--SSEEEEESSS-------C
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEcC--CEEEEEECCC-------C
Confidence 000 0001122233344556666666664 459999999999865 6799988764 4
Q ss_pred EEEEeCeEEEcccC
Q 020533 134 EYYSGRFLVVASGE 147 (325)
Q Consensus 134 ~~~~ad~vIiAtG~ 147 (325)
. +.||.||+|+..
T Consensus 151 ~-~~ad~vV~A~p~ 163 (342)
T 3qj4_A 151 P-EQFDLIVLTMPV 163 (342)
T ss_dssp C-EEESEEEECSCH
T ss_pred E-EEcCEEEECCCH
Confidence 5 789999999984
No 105
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.34 E-value=4.2e-12 Score=113.17 Aligned_cols=130 Identities=13% Similarity=0.215 Sum_probs=81.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCC--------------------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLP-------------------- 66 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~-------------------- 66 (325)
++||+|||||++|+++|..|++.|++|+|||+++.+||.+..........+.....+...
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 369999999999999999999999999999999999887765433333222211111000
Q ss_pred -----------CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEE
Q 020533 67 -----------HLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (325)
Q Consensus 67 -----------~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (325)
..+.......+.....+..+.+..++ ++. ++++++|++++.++ +.|.|++.++. ..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~~--i~~~~~v~~i~~~~--~~~~v~~~~g~------~~- 148 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DMP--VSFSCRITEVFRGE--EHWNLLDAEGQ------NH- 148 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TCC--EECSCCEEEEEECS--SCEEEEETTSC------EE-
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cCc--EEecCEEEEEEEeC--CEEEEEeCCCc------Cc-
Confidence 00000000111111223333333333 554 59999999998865 67998876541 33
Q ss_pred EEeCeEEEcccCCC
Q 020533 136 YSGRFLVVASGETT 149 (325)
Q Consensus 136 ~~ad~vIiAtG~~~ 149 (325)
..+|+||+|+|..+
T Consensus 149 ~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 149 GPFSHVIIATPAPQ 162 (336)
T ss_dssp EEESEEEECSCHHH
T ss_pred cccCEEEEcCCHHH
Confidence 45999999999654
No 106
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.33 E-value=7.1e-12 Score=117.98 Aligned_cols=136 Identities=15% Similarity=0.135 Sum_probs=89.9
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC--------------CCCce----Eee---cCCCcc
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--------------SYDRL----RLH---LAKQFC 63 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~--------------~y~~~----~~~---~~~~~~ 63 (325)
...+||+||||||+||++|..|++.|++|+|||+.+..+...+.. ..+.+ ... ......
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 89 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPV 89 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceec
Confidence 346899999999999999999999999999999987654211110 00000 000 000000
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEE
Q 020533 64 QLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVV 143 (325)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIi 143 (325)
.+.....+.......++..+.+.|.+.+.+.++. ++++++|++++.++ +.++|++.++.+ + .+ +++|+||.
T Consensus 90 ~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~--v~~~~~v~~i~~~~--~~v~v~~~~~~g---~-~~-~~a~~vVg 160 (499)
T 2qa2_A 90 DFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAE--LLRGHTVRALTDEG--DHVVVEVEGPDG---P-RS-LTTRYVVG 160 (499)
T ss_dssp EGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCE--EEESCEEEEEEECS--SCEEEEEECSSC---E-EE-EEEEEEEE
T ss_pred ccccCCCCCCceEecCHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEeC--CEEEEEEEcCCC---c-EE-EEeCEEEE
Confidence 0000000000112346889999999999988754 59999999998865 568888876532 1 57 89999999
Q ss_pred cccCCC
Q 020533 144 ASGETT 149 (325)
Q Consensus 144 AtG~~~ 149 (325)
|+|.+|
T Consensus 161 ADG~~S 166 (499)
T 2qa2_A 161 CDGGRS 166 (499)
T ss_dssp CCCTTC
T ss_pred ccCccc
Confidence 999876
No 107
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.32 E-value=1.1e-12 Score=123.47 Aligned_cols=139 Identities=16% Similarity=0.122 Sum_probs=89.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCC-Cc-cCCCCCCCCCCCCCCCCHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAK-QF-CQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~ 83 (325)
..+||+|||||++|+++|..|++.|++|+|+|+++.+|+....+.++...-.... .. .....+.. ......++.++
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~--~~~~~~~~~~l 168 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCT--GTLDHISIRQL 168 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTC--TTCCEEEHHHH
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccccccccc--cccccCCHHHH
Confidence 4689999999999999999999999999999999887753211111100000000 00 00000000 00112456889
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcC-CCCcEEEEEeec-CCCCceeEEEEEeCeEEEcccCCCCCC
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDE-ATNMWNVKASNL-LSPGREIEEYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~-~~~~~~v~~~~~-~~~~~~~~~~~~ad~vIiAtG~~~~p~ 152 (325)
.++|.+.+++.++. ++++++|++++.++ +.+.|.|++.+. ++ +..+ +.+|+||+|+|..+.++
T Consensus 169 ~~~L~~~~~~~gv~--v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g---~~~~-i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 169 QLLLLKVALLLGVE--IHWGVKFTGLQPPPRKGSGWRAQLQPNPPA---QLAS-YEFDVLISAAGGKFVPE 233 (497)
T ss_dssp HHHHHHHHHHTTCE--EEESCEEEEEECCCSTTCCBEEEEESCCCH---HHHT-CCBSEEEECCCTTCCCT
T ss_pred HHHHHHHHHhCCCE--EEeCCEEEEEEEecCCCCEEEEEEEECCCC---CEEE-EEcCEEEECCCCCcccc
Confidence 99999999887754 59999999998752 235688887432 11 1135 88999999999766543
No 108
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.30 E-value=2.1e-11 Score=115.20 Aligned_cols=142 Identities=20% Similarity=0.265 Sum_probs=87.5
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC----CCCCccCCC------------------CCCc---eE
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN----CYASIWKKY------------------SYDR---LR 55 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~----~~Gg~w~~~------------------~y~~---~~ 55 (325)
|+....++||+|||||++|+++|..|++.|++|+|+|+.+ ..|..+... .+.. ..
T Consensus 1 M~~~~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~ 80 (512)
T 3e1t_A 1 MSTRPEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGT 80 (512)
T ss_dssp ----CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEE
T ss_pred CCCCCccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCce
Confidence 5544456899999999999999999999999999999987 333221110 0000 00
Q ss_pred eecCCC----ccCCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcE-EEEEeecCCCC
Q 020533 56 LHLAKQ----FCQLPHLPF-PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPG 129 (325)
Q Consensus 56 ~~~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~ 129 (325)
...... ...+...+. .........+..+.++|.+.+++.++. ++++++|+++..++ +.. .|.+...++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~~~~V~~v~~~~--~~v~gv~~~~~dG-- 154 (512)
T 3e1t_A 81 FRWGKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVD--VRERHEVIDVLFEG--ERAVGVRYRNTEG-- 154 (512)
T ss_dssp EECSSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEET--TEEEEEEEECSSS--
T ss_pred EEecCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCE--EEcCCEEEEEEEEC--CEEEEEEEEeCCC--
Confidence 000000 001111110 011112367889999999999988754 49999999998864 433 244443222
Q ss_pred ceeEEEEEeCeEEEcccCCCC
Q 020533 130 REIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 130 ~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+..+ +.+|.||.|+|.++.
T Consensus 155 -~~~~-i~ad~VI~AdG~~S~ 173 (512)
T 3e1t_A 155 -VELM-AHARFIVDASGNRTR 173 (512)
T ss_dssp -CEEE-EEEEEEEECCCTTCS
T ss_pred -CEEE-EEcCEEEECCCcchH
Confidence 2257 899999999997653
No 109
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.30 E-value=5.7e-12 Score=120.38 Aligned_cols=169 Identities=14% Similarity=0.172 Sum_probs=100.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCCccCCCCCCceEee-----------cCCCc--------cCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLH-----------LAKQF--------CQL 65 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~-~~Gg~w~~~~y~~~~~~-----------~~~~~--------~~~ 65 (325)
..+||+|||||++|+++|..|++.|.+|+|+|++. .+|... +.+..... ....+ ..+
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~---Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f 103 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS---CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQF 103 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS---SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc---ccccccchhhHHHHHHHHHhccHHHHHhhhcccch
Confidence 35899999999999999999999999999999984 344211 01110000 00000 000
Q ss_pred CCC---CCCCC--CCCCCCHHHHHHHHHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeC
Q 020533 66 PHL---PFPSS--YPMFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (325)
Q Consensus 66 ~~~---~~~~~--~~~~~~~~~~~~yl~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (325)
... ..+.. ......+..+.+++.+.+++ .++. + ++++|+.+..++ +..+.|.+.++ .. +.||
T Consensus 104 ~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~--I-~~~~V~~L~~e~-g~V~GV~t~dG-------~~-I~Ad 171 (651)
T 3ces_A 104 RILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLM--I-FQQAVEDLIVEN-DRVVGAVTQMG-------LK-FRAK 171 (651)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EECCEEEEEESS-SBEEEEEETTS-------EE-EEEE
T ss_pred hhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCE--E-EEEEEEEEEecC-CEEEEEEECCC-------CE-EECC
Confidence 000 00000 00123456788888888887 4644 3 677899887654 23345666543 57 8999
Q ss_pred eEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEe
Q 020533 140 FLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (325)
Q Consensus 140 ~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r 217 (325)
.||+|||.+ +..+.++|...+ . +.+ +| |.++.+++..|.+.|.+|+.+..
T Consensus 172 ~VVLATGt~--s~~~~i~G~~~~------~----------------~gr---iG-g~~a~eLA~~L~~lG~~v~~~~t 221 (651)
T 3ces_A 172 AVVLTVGTF--LDGKIHIGLDNY------S----------------GGR---AG-DPPSIPLSRRLRELPLRVGRLKT 221 (651)
T ss_dssp EEEECCSTT--TCCEEECC---------------------------------------CCHHHHHHHTTTCCEEEECC
T ss_pred EEEEcCCCC--ccCccccCcccC------C----------------CCC---cc-chhhhHHHHHHHhcCCeEEEecC
Confidence 999999954 444456666543 1 122 56 78899999999999999988753
No 110
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.30 E-value=3.2e-11 Score=116.86 Aligned_cols=146 Identities=18% Similarity=0.243 Sum_probs=93.8
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCCCCCccCCCC------------------------CCceE
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCYASIWKKYS------------------------YDRLR 55 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e~~~~~Gg~w~~~~------------------------y~~~~ 55 (325)
|..++..+||+||||||+||++|..|++ .|++|+||||.+..+...+... .....
T Consensus 26 m~~~~~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~ 105 (639)
T 2dkh_A 26 TEAVPSQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVT 105 (639)
T ss_dssp CSSCCSEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEE
T ss_pred cCCCCCCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceE
Confidence 3333345799999999999999999999 9999999999876543222100 01111
Q ss_pred eecC-----CCcc---CCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCC--CCcEEEEEe
Q 020533 56 LHLA-----KQFC---QLPHLP--FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKAS 123 (325)
Q Consensus 56 ~~~~-----~~~~---~~~~~~--~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~ 123 (325)
...+ .... .++... .........++..+.++|.+.+.+.+....++++++|++++.+++ ...++|+++
T Consensus 106 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~ 185 (639)
T 2dkh_A 106 FWKPDPGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLE 185 (639)
T ss_dssp EEEECTTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEE
T ss_pred EECCCCCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEE
Confidence 1110 0000 000000 000011235788999999999999876334599999999988652 235888776
Q ss_pred e----cCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 124 N----LLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 124 ~----~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+ .++ +..+ +++|+||.|+|.+|.
T Consensus 186 ~~~~~~~G---~~~~-i~a~~vVgADG~~S~ 212 (639)
T 2dkh_A 186 RCDAAHAG---QIET-VQARYVVGCDGARSN 212 (639)
T ss_dssp ECSGGGTT---CEEE-EEEEEEEECCCTTCH
T ss_pred eccccCCC---CeEE-EEeCEEEECCCcchH
Confidence 5 122 2257 899999999998763
No 111
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.30 E-value=1.4e-11 Score=117.17 Aligned_cols=136 Identities=18% Similarity=0.185 Sum_probs=90.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC------------------------CC---ce---Ee
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS------------------------YD---RL---RL 56 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~------------------------y~---~~---~~ 56 (325)
++||+|||||++||++|..|+++|++|+|||+++..+..-+... +. .. ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 57999999999999999999999999999999876542111100 00 00 00
Q ss_pred ec--CCCcc----CCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCC--cEEEEEe
Q 020533 57 HL--AKQFC----QLPH-----LPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATN--MWNVKAS 123 (325)
Q Consensus 57 ~~--~~~~~----~~~~-----~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~--~~~v~~~ 123 (325)
.. ...+. .+.. ...........++..+.++|.+.+.+.++. ++++++|++++.+++.. .+++++.
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~~~~~~~v~v~~~ 162 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGA--IRFGTRLLSFRQHDDDAGAGVTARLA 162 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCE--EESSCEEEEEEEECGGGCSEEEEEEE
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCE--EEeCCEEEEEEECCCCccccEEEEEE
Confidence 00 00000 0000 000001123467899999999999998754 59999999998875211 7888887
Q ss_pred ecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 124 NLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 124 ~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
++++ ..+ ++||+||.|+|.+|
T Consensus 163 ~~~~----~~~-i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 163 GPDG----EYD-LRAGYLVGADGNRS 183 (535)
T ss_dssp ETTE----EEE-EEEEEEEECCCTTC
T ss_pred cCCC----eEE-EEeCEEEECCCCcc
Confidence 6532 267 89999999999876
No 112
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.29 E-value=1.1e-11 Score=113.47 Aligned_cols=130 Identities=14% Similarity=0.170 Sum_probs=83.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC-----CCccCCCCCCce---------------------EeecC-
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY-----ASIWKKYSYDRL---------------------RLHLA- 59 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~-----Gg~w~~~~y~~~---------------------~~~~~- 59 (325)
.+||+|||||++|+++|..|++.|++|+|||+++.+ |+.|........ .....
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~ 105 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIADEK 105 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEECCC
Confidence 579999999999999999999999999999998753 333321100000 00000
Q ss_pred C-CccCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEE
Q 020533 60 K-QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYS 137 (325)
Q Consensus 60 ~-~~~~~~~~~~~-~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 137 (325)
. ...... .+.. ........+.++.++|.+.+.. ..++++++|++++.++ +.|+|++.++ .+ +.
T Consensus 106 g~~~~~~~-~~~~~~~~~~~i~r~~l~~~L~~~~~~----~~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~-~~ 170 (398)
T 2xdo_A 106 GNILSTKN-VKPENRFDNPEINRNDLRAILLNSLEN----DTVIWDRKLVMLEPGK--KKWTLTFENK-------PS-ET 170 (398)
T ss_dssp SEEEEECC-CGGGTTSSCCEECHHHHHHHHHHTSCT----TSEEESCCEEEEEECS--SSEEEEETTS-------CC-EE
T ss_pred CCchhhcc-ccccCCCCCceECHHHHHHHHHhhcCC----CEEEECCEEEEEEECC--CEEEEEECCC-------cE-Ee
Confidence 0 000000 0000 0011234677888888765542 3469999999998865 5788888764 45 89
Q ss_pred eCeEEEcccCCCCC
Q 020533 138 GRFLVVASGETTNP 151 (325)
Q Consensus 138 ad~vIiAtG~~~~p 151 (325)
+|.||.|+|.++..
T Consensus 171 ad~vV~AdG~~S~v 184 (398)
T 2xdo_A 171 ADLVILANGGMSKV 184 (398)
T ss_dssp ESEEEECSCTTCSC
T ss_pred cCEEEECCCcchhH
Confidence 99999999987643
No 113
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.29 E-value=8.9e-12 Score=105.44 Aligned_cols=132 Identities=15% Similarity=0.059 Sum_probs=84.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
.+||+|||||++|+++|..|++.|.+|+|+|++....|.|........ ........+. + ..-+.+.++.++
T Consensus 3 ~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~~~~~~~~~--~~~~~~~~~~-----d--~~g~~~~~~~~~ 73 (232)
T 2cul_A 3 AYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMPFLPPKPPF--PPGSLLERAY-----D--PKDERVWAFHAR 73 (232)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCCCSCC--CTTCHHHHHC-----C--TTCCCHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcccCcccccc--chhhHHhhhc-----c--CCCCCHHHHHHH
Confidence 479999999999999999999999999999998443333321110000 0000000000 0 011256788899
Q ss_pred HHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCCCccc
Q 020533 87 LDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIRGLCS 161 (325)
Q Consensus 87 l~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~g~~~ 161 (325)
+.+.+++. ++.. + +++|+++..++ ...+.|.+.++ .+ +.+|.||+|+|.++.... .+|...
T Consensus 74 l~~~~~~~~gv~i--~-~~~v~~i~~~~-~~v~~v~~~~g-------~~-i~a~~VV~A~G~~s~~~~--~~G~~~ 135 (232)
T 2cul_A 74 AKYLLEGLRPLHL--F-QATATGLLLEG-NRVVGVRTWEG-------PP-ARGEKVVLAVGSFLGARL--FLGGVV 135 (232)
T ss_dssp HHHHHHTCTTEEE--E-ECCEEEEEEET-TEEEEEEETTS-------CC-EECSEEEECCTTCSSCEE--EETTEE
T ss_pred HHHHHHcCCCcEE--E-EeEEEEEEEeC-CEEEEEEECCC-------CE-EECCEEEECCCCChhhce--ecCCcc
Confidence 99999887 7543 4 67899998764 22345666543 46 899999999997655442 345443
No 114
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.28 E-value=4.3e-11 Score=113.97 Aligned_cols=134 Identities=13% Similarity=0.208 Sum_probs=88.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC----------------------CCC-----c-eEeec
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY----------------------SYD-----R-LRLHL 58 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~----------------------~y~-----~-~~~~~ 58 (325)
.+||+||||||+||++|..|++.|++|+||||.+..+...+.. .++ . ..+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 4699999999999999999999999999999988665322211 000 0 11110
Q ss_pred --CCCccCCCCCCC--------CCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCC
Q 020533 59 --AKQFCQLPHLPF--------PSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSP 128 (325)
Q Consensus 59 --~~~~~~~~~~~~--------~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~ 128 (325)
...+..+..... ........++..+.++|.+.+++. ++++++|++++.++ +.+++++.+..++
T Consensus 106 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~--~~v~v~~~~~~~G 178 (549)
T 2r0c_A 106 VGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD--DHVRATITDLRTG 178 (549)
T ss_dssp BTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--SCEEEEEEETTTC
T ss_pred CCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--CEEEEEEEECCCC
Confidence 001111110000 000112357888999999988876 59999999998865 5688888763222
Q ss_pred CceeEEEEEeCeEEEcccCCCC
Q 020533 129 GREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 129 ~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+..+ ++||+||.|+|.+|.
T Consensus 179 --~~~~-i~a~~vVgADG~~S~ 197 (549)
T 2r0c_A 179 --ATRA-VHARYLVACDGASSP 197 (549)
T ss_dssp --CEEE-EEEEEEEECCCTTCH
T ss_pred --CEEE-EEeCEEEECCCCCcH
Confidence 2257 899999999998763
No 115
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.27 E-value=3.7e-11 Score=115.16 Aligned_cols=140 Identities=14% Similarity=0.200 Sum_probs=88.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc------CCCeEEEecCCCCCCccCCCC------------------CC--------ce
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ------SIPYVILERENCYASIWKKYS------------------YD--------RL 54 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~------g~~v~v~e~~~~~Gg~w~~~~------------------y~--------~~ 54 (325)
.+||+|||||++||++|..|++. |++|+|+||.+.+|+...... .+ ..
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~ 114 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRF 114 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhe
Confidence 47999999999999999999999 999999999987765321100 00 00
Q ss_pred EeecCCCccCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEee----cCC
Q 020533 55 RLHLAKQFCQLPHLP---FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN----LLS 127 (325)
Q Consensus 55 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~----~~~ 127 (325)
..........++..+ +........++.++.++|.+.+++.++. ++++++|+++..+++...+.|.+.+ .++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~--i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~G 192 (584)
T 2gmh_A 115 GILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVE--VYPGYAAAEILFHEDGSVKGIATNDVGIQKDG 192 (584)
T ss_dssp EEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCE--EETTCCEEEEEECTTSSEEEEEECCEEECTTS
T ss_pred eeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCE--EEcCCEEEEEEEcCCCCEEEEEeCCccccCCC
Confidence 000010011111111 0011112357889999999999988855 4999999999876522233366653 111
Q ss_pred CCc----eeEEEEEeCeEEEcccCCC
Q 020533 128 PGR----EIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 128 ~~~----~~~~~~~ad~vIiAtG~~~ 149 (325)
..+ ...+ +++|+||+|+|.++
T Consensus 193 ~~~~~~~~g~~-i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 193 APKTTFERGLE-LHAKVTIFAEGCHG 217 (584)
T ss_dssp CEEEEEECCCE-EECSEEEECCCTTC
T ss_pred CcccccCCceE-EECCEEEEeeCCCc
Confidence 000 0046 89999999999876
No 116
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.24 E-value=1.6e-11 Score=111.58 Aligned_cols=126 Identities=13% Similarity=0.117 Sum_probs=83.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC------------------------CCCCceEeecCCCc
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK------------------------YSYDRLRLHLAKQF 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~------------------------~~y~~~~~~~~~~~ 62 (325)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+++.-.. ..............
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~~ 90 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNKS 90 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTEE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCce
Confidence 579999999999999999999999999999998876531000 00001111000000
Q ss_pred cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
+..++.+........+.++.++|.+.+.+.++. ++++++|++++. + + .|++.++ .+ +.+|.||
T Consensus 91 --~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~-~--~--~v~~~~g-------~~-~~ad~vV 153 (379)
T 3alj_A 91 --VSKETFNGLPWRIMTRSHLHDALVNRARALGVD--ISVNSEAVAADP-V--G--RLTLQTG-------EV-LEADLIV 153 (379)
T ss_dssp --EEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCE--EESSCCEEEEET-T--T--EEEETTS-------CE-EECSEEE
T ss_pred --eeeccCCCCceEEECHHHHHHHHHHHHHhcCCE--EEeCCEEEEEEe-C--C--EEEECCC-------CE-EEcCEEE
Confidence 000000000012356789999999999887754 599999999976 2 3 6777653 46 8999999
Q ss_pred EcccCCC
Q 020533 143 VASGETT 149 (325)
Q Consensus 143 iAtG~~~ 149 (325)
.|+|.++
T Consensus 154 ~AdG~~s 160 (379)
T 3alj_A 154 GADGVGS 160 (379)
T ss_dssp ECCCTTC
T ss_pred ECCCccH
Confidence 9999765
No 117
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.24 E-value=3.1e-11 Score=111.74 Aligned_cols=63 Identities=6% Similarity=0.090 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCe---EEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQR---SVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~---~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
....+.+.|.+.+++.|+. +++++ +|+++..++ +.|. |++.++ .+ +.||.||+|+|.++....
T Consensus 159 ~~~~~~~~L~~~a~~~Gv~--i~~~t~~~~V~~i~~~~--~~v~gV~t~~G-------~~-i~Ad~VV~AtG~~s~~l~ 225 (438)
T 3dje_A 159 HARNALVAAAREAQRMGVK--FVTGTPQGRVVTLIFEN--NDVKGAVTADG-------KI-WRAERTFLCAGASAGQFL 225 (438)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESTTTTCEEEEEEET--TEEEEEEETTT-------EE-EECSEEEECCGGGGGGTS
T ss_pred cHHHHHHHHHHHHHhcCCE--EEeCCcCceEEEEEecC--CeEEEEEECCC-------CE-EECCEEEECCCCChhhhc
Confidence 3568888899999988855 49999 999998764 6676 777653 57 999999999998764433
No 118
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.23 E-value=1.2e-11 Score=114.92 Aligned_cols=134 Identities=19% Similarity=0.260 Sum_probs=86.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC--CCCceEee---------cCC--Cc-----cCCC-
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY--SYDRLRLH---------LAK--QF-----CQLP- 66 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~--~y~~~~~~---------~~~--~~-----~~~~- 66 (325)
..+||+|||||++|+++|..|++.|.+|+|+|+.+.+|+..... ....+... .+. .+ ..+.
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 104 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNN 104 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCH
Confidence 35799999999999999999999999999999998776421100 00000000 000 00 0000
Q ss_pred ----------CCCC--CCCCCCCC---CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCc-EEEEEeecCCCCc
Q 020533 67 ----------HLPF--PSSYPMFV---SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGR 130 (325)
Q Consensus 67 ----------~~~~--~~~~~~~~---~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~-~~v~~~~~~~~~~ 130 (325)
..++ ......++ ....+.+.|.+.+++.++. ++++++|+++..++ +. |.|++.++
T Consensus 105 ~~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV~--i~~~~~V~~i~~~~--~~v~~V~~~~G----- 175 (447)
T 2i0z_A 105 EDIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGVK--IRTNTPVETIEYEN--GQTKAVILQTG----- 175 (447)
T ss_dssp HHHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEEET--TEEEEEEETTC-----
T ss_pred HHHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCCE--EEeCcEEEEEEecC--CcEEEEEECCC-----
Confidence 0000 00000111 4678888999999888755 49999999998754 44 77877653
Q ss_pred eeEEEEEeCeEEEcccCCCCC
Q 020533 131 EIEEYYSGRFLVVASGETTNP 151 (325)
Q Consensus 131 ~~~~~~~ad~vIiAtG~~~~p 151 (325)
.+ +.||.||+|+|.++.|
T Consensus 176 --~~-i~Ad~VVlAtGg~s~~ 193 (447)
T 2i0z_A 176 --EV-LETNHVVIAVGGKSVP 193 (447)
T ss_dssp --CE-EECSCEEECCCCSSSG
T ss_pred --CE-EECCEEEECCCCCcCC
Confidence 46 8999999999987743
No 119
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.23 E-value=2.6e-11 Score=115.39 Aligned_cols=176 Identities=13% Similarity=0.108 Sum_probs=108.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCCccCCCCCCceEee-----------cCCCc--------cCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLH-----------LAKQF--------CQL 65 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~-~~Gg~w~~~~y~~~~~~-----------~~~~~--------~~~ 65 (325)
..+||+|||||++|++||..|++.|.+|+|+|++. .+|+. . +.+..... ....+ ..+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~-~--Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f 102 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM-S--CNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQF 102 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC-C--SCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc-C--ccccccccchHHHHHHHHHhhhHHHHHhhhcccce
Confidence 35899999999999999999999999999999984 44431 1 11110000 00000 000
Q ss_pred CCCC---CCCC--CCCCCCHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeC
Q 020533 66 PHLP---FPSS--YPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR 139 (325)
Q Consensus 66 ~~~~---~~~~--~~~~~~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad 139 (325)
.... -+.. ......+..+.+++.+.++++ ++. + ++++|+++..++ +..+.|.+.++ .. +.|+
T Consensus 103 ~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVe--I-~~~~Vt~L~~e~-g~V~GV~t~dG-------~~-i~Ad 170 (637)
T 2zxi_A 103 KMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLY--I-KQEEVVDIIVKN-NQVVGVRTNLG-------VE-YKTK 170 (637)
T ss_dssp EEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEE--E-EESCEEEEEESS-SBEEEEEETTS-------CE-EECS
T ss_pred eecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCE--E-EEeEEEEEEecC-CEEEEEEECCC-------cE-EEeC
Confidence 0000 0000 001235567888888888874 644 3 577899887654 22344666543 56 8999
Q ss_pred eEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEe-c
Q 020533 140 FLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR-S 218 (325)
Q Consensus 140 ~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r-~ 218 (325)
.||+|||.+ +..+.++|.+.+ . +.+ +| +.++.+++..|.+.|.+++.+.+ .
T Consensus 171 aVVLATG~~--s~~~~~~G~~~~------~----------------~Gr---~G-~~~A~~la~~L~~lG~~v~~l~tgt 222 (637)
T 2zxi_A 171 AVVVTTGTF--LNGVIYIGDKMI------P----------------GGR---LG-EPRSEGLSDFYRRFDFPLIRFKTGT 222 (637)
T ss_dssp EEEECCTTC--BTCEEEETTEEE------E----------------CSB---TT-BCCBCTHHHHHHHTTCCCEEEEEEE
T ss_pred EEEEccCCC--ccCceeccceec------C----------------CCC---CC-chhHHHHHHHHHhcCCceEEecCCc
Confidence 999999954 444556666554 1 111 23 56789999999999988877654 3
Q ss_pred CCeeec
Q 020533 219 PVHVLS 224 (325)
Q Consensus 219 ~~~~~p 224 (325)
+..+..
T Consensus 223 ppRi~~ 228 (637)
T 2zxi_A 223 PARLDK 228 (637)
T ss_dssp CCEEEG
T ss_pred Cceecc
Confidence 444433
No 120
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.21 E-value=2.3e-10 Score=109.49 Aligned_cols=137 Identities=14% Similarity=0.133 Sum_probs=87.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeec------------CCC-------------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHL------------AKQ------------- 61 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~------------~~~------------- 61 (325)
.+||+|||||++||++|..|++.|.+|+|+|+.+.+||...... .++.... +..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~-gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAA-GGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIN 204 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCC-SCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcC-ceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 57999999999999999999999999999999998887533210 0000000 000
Q ss_pred ----------------------ccCCC------CCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEE
Q 020533 62 ----------------------FCQLP------HLPFPSSY---PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (325)
Q Consensus 62 ----------------------~~~~~------~~~~~~~~---~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~ 110 (325)
-..+. ...++... ........+.+.|.+.+++.++. ++++++|+++.
T Consensus 205 ~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~--i~~~~~v~~l~ 282 (571)
T 1y0p_A 205 DPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNID--LRMNTRGIEVL 282 (571)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCCE--EEeCCEeeEeE
Confidence 00000 00000000 01133578889999999988865 49999999998
Q ss_pred EcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.+++...+.|.+.+.++ +..+ +.+|.||+|||.++.
T Consensus 283 ~~~~g~v~Gv~~~~~~g---~~~~-i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 283 KDDKGTVKGILVKGMYK---GYYW-VKADAVILATGGFAK 318 (571)
T ss_dssp ECTTSCEEEEEEEETTT---EEEE-EECSEEEECCCCCTT
T ss_pred EcCCCeEEEEEEEeCCC---cEEE-EECCeEEEeCCCccc
Confidence 75422334455554221 3357 899999999998653
No 121
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.19 E-value=1.7e-10 Score=109.19 Aligned_cols=132 Identities=21% Similarity=0.332 Sum_probs=83.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC-------CccCCCCCCc-eEee----------cCCCccCCCC-
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA-------SIWKKYSYDR-LRLH----------LAKQFCQLPH- 67 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~G-------g~w~~~~y~~-~~~~----------~~~~~~~~~~- 67 (325)
.+||+|||||++|+++|..|++.|++|+|+|+.+.++ +.|....... .... ..+....+..
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 4799999999999999999999999999999997652 2232211000 0000 0000000000
Q ss_pred -------------CCCCCC--C--CCC---CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCC
Q 020533 68 -------------LPFPSS--Y--PMF---VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS 127 (325)
Q Consensus 68 -------------~~~~~~--~--~~~---~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~ 127 (325)
+..+.. + ..+ ....++.+.+.+.+++.++.. +++++|+++..++ ...+.|++.++
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I--~~~t~V~~I~~~~-~~v~gV~l~~G-- 261 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEI--RFSTRVDDLHMED-GQITGVTLSNG-- 261 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEE--ESSCCEEEEEESS-SBEEEEEETTS--
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEE--EeCCEEEEEEEeC-CEEEEEEECCC--
Confidence 000000 0 001 123677888888888888654 9999999998764 23455777654
Q ss_pred CCceeEEEEEeCeEEEcccCCC
Q 020533 128 PGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 128 ~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.+ +.||.||+|+|.++
T Consensus 262 -----~~-i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 262 -----EE-IKSRHVVLAVGHSA 277 (549)
T ss_dssp -----CE-EECSCEEECCCTTC
T ss_pred -----CE-EECCEEEECCCCCh
Confidence 56 89999999999765
No 122
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.19 E-value=1.1e-10 Score=106.80 Aligned_cols=125 Identities=16% Similarity=0.101 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC----CC-ccCC----------CCC--------CceEeecC--CC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY----AS-IWKK----------YSY--------DRLRLHLA--KQ 61 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~----Gg-~w~~----------~~y--------~~~~~~~~--~~ 61 (325)
.+||+|||||++||++|..|++.|++|+|||+.+.. |+ .+.. ... ........ ..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 84 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALTGE 84 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTTCC
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCCCC
Confidence 579999999999999999999999999999998753 11 1100 000 00000000 00
Q ss_pred ccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeE
Q 020533 62 FCQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~v 141 (325)
.. ...+.+ .....+..+.++|.+.+ .++ .++++++|++++.++ +.|+|++.++ .+ +.+|.|
T Consensus 85 ~~--~~~~~~---~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~~--~~v~v~~~~g-------~~-~~ad~v 145 (397)
T 2vou_A 85 RV--GSVPAD---WRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQDS--ETVQMRFSDG-------TK-AEANWV 145 (397)
T ss_dssp EE--EEEECC---CCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEECS--SCEEEEETTS-------CE-EEESEE
T ss_pred cc--ccccCc---ccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEecC--CEEEEEECCC-------CE-EECCEE
Confidence 00 000000 11244567777777665 243 459999999998765 5688888664 46 899999
Q ss_pred EEcccCCCC
Q 020533 142 VVASGETTN 150 (325)
Q Consensus 142 IiAtG~~~~ 150 (325)
|.|+|.+|.
T Consensus 146 V~AdG~~S~ 154 (397)
T 2vou_A 146 IGADGGASV 154 (397)
T ss_dssp EECCCTTCH
T ss_pred EECCCcchh
Confidence 999998764
No 123
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.19 E-value=2e-11 Score=111.44 Aligned_cols=136 Identities=16% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC------C-C-ccCC--------CC----------CCceEeecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY------A-S-IWKK--------YS----------YDRLRLHLAK 60 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~------G-g-~w~~--------~~----------y~~~~~~~~~ 60 (325)
++||+|||||++|+++|..|++.|++|+|+|+.+.. + | .|.. .. +..+......
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 379999999999999999999999999999998641 1 1 1110 00 0111111111
Q ss_pred CccCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEE-eecCCCCceeEEEEEe
Q 020533 61 QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKA-SNLLSPGREIEEYYSG 138 (325)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~-~~~~~~~~~~~~~~~a 138 (325)
....+...... ........+.++.+.|.+.+.+.++. ++++++|++++.++ .+.+.|++ .++ +..+ +++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~--i~~~~~v~~i~~~~-~~~~~v~~~~~g-----~~~~-~~a 152 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGAT--TVYQAAEVRLHDLQ-GERPYVTFERDG-----ERLR-LDC 152 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCE--EESSCEEEEEECTT-SSSCEEEEEETT-----EEEE-EEC
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCe--EEeceeEEEEEEec-CCceEEEEecCC-----cEEE-EEe
Confidence 00000000000 00112246678888888888877754 59999999998653 24577877 432 2247 899
Q ss_pred CeEEEcccCCCCC
Q 020533 139 RFLVVASGETTNP 151 (325)
Q Consensus 139 d~vIiAtG~~~~p 151 (325)
|.||.|+|.+|..
T Consensus 153 ~~vV~AdG~~S~v 165 (394)
T 1k0i_A 153 DYIAGCDGFHGIS 165 (394)
T ss_dssp SEEEECCCTTCST
T ss_pred CEEEECCCCCcHH
Confidence 9999999987653
No 124
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.19 E-value=1.1e-10 Score=101.79 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=81.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCC-ccCCC-CCCceEeecCCC-ccCCCCCCCCCCCCC--CCCH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYAS-IWKKY-SYDRLRLHLAKQ-FCQLPHLPFPSSYPM--FVSR 80 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~~~Gg-~w~~~-~y~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~ 80 (325)
.+||+|||||++|+++|..|++. |.+|+|+|+++.+|| .|... .+..+....+.. ++.-...++...... ....
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~~~~~~~~~~ 118 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQDTYVVVKHA 118 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESCH
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccCCCEEEecCH
Confidence 47999999999999999999997 999999999988875 45332 122222111100 000000111100000 1145
Q ss_pred HHHHHHHHHHHHH-cCCCceeeeCeEEEEEEEcCCCCc-EEEEEee---------cCCCCceeEEEEEeCeEEEcccCC
Q 020533 81 AQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNM-WNVKASN---------LLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 81 ~~~~~yl~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~-~~v~~~~---------~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
.++...+.+.+.+ .++ .++++++|+++..++ +. ..|.+.. +..+ +... +.+|.||+|+|..
T Consensus 119 ~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g--~~~~-i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 119 ALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCM--DPNV-MEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHHTSTTE--EEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCC--CCEE-EEEEEEEECCCSS
T ss_pred HHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccC--ceEE-EECCEEEECCCCc
Confidence 6777777776654 464 459999999998764 32 2344431 0111 2267 8999999999954
No 125
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.19 E-value=3.5e-11 Score=110.00 Aligned_cols=132 Identities=14% Similarity=0.134 Sum_probs=86.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC-------------------ccCC-----CCCCceEeecC-C-
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS-------------------IWKK-----YSYDRLRLHLA-K- 60 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg-------------------~w~~-----~~y~~~~~~~~-~- 60 (325)
++||+|||||++|+++|..|++.|++|+|+|+.+.... .|.. ..+..+..... .
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999999999999999875411 0000 00000111000 0
Q ss_pred CccCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcE--EEEEeecCCCCceeEEEE
Q 020533 61 QFCQLPHLPFP-SSYPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMW--NVKASNLLSPGREIEEYY 136 (325)
Q Consensus 61 ~~~~~~~~~~~-~~~~~~~~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~--~v~~~~~~~~~~~~~~~~ 136 (325)
....++..... ........+.++.+.|.+.+++. ++. ++++++|++++.++ +.| .|++.++ .+ +
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~--i~~~~~v~~i~~~~--~~v~g~v~~~~g-------~~-~ 153 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVE--MLFETRIEAVQRDE--RHAIDQVRLNDG-------RV-L 153 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEE--EECSCCEEEEEECT--TSCEEEEEETTS-------CE-E
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcE--EEcCCEEEEEEEcC--CceEEEEEECCC-------CE-E
Confidence 00011100000 01112367889999999998876 644 59999999998865 567 7877653 46 8
Q ss_pred EeCeEEEcccCCCC
Q 020533 137 SGRFLVVASGETTN 150 (325)
Q Consensus 137 ~ad~vIiAtG~~~~ 150 (325)
.+|.||.|+|.++.
T Consensus 154 ~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 154 RPRVVVGADGIASY 167 (399)
T ss_dssp EEEEEEECCCTTCH
T ss_pred ECCEEEECCCCChH
Confidence 99999999997663
No 126
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.19 E-value=1.1e-10 Score=111.70 Aligned_cols=135 Identities=15% Similarity=0.132 Sum_probs=88.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC------------------ccCC---CCC---CceEeecCCC-
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS------------------IWKK---YSY---DRLRLHLAKQ- 61 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg------------------~w~~---~~y---~~~~~~~~~~- 61 (325)
.+||+|||||++|+++|..|++.|++|+|+|+.+..+. .|.. ..+ ..........
T Consensus 23 ~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~~~ 102 (591)
T 3i3l_A 23 RSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQDQ 102 (591)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecCCC
Confidence 47999999999999999999999999999999864321 1100 000 0011110000
Q ss_pred ---ccCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEE
Q 020533 62 ---FCQLPHLP---FPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEY 135 (325)
Q Consensus 62 ---~~~~~~~~---~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~ 135 (325)
.+.+.... +.........+..+.++|.+.+++.|+.. +++++|+++..++ ...+.|++.+.. +..+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i--~~g~~V~~v~~~~-g~~~~V~~~~~G----~~~~- 174 (591)
T 3i3l_A 103 APWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITV--HEETPVTDVDLSD-PDRVVLTVRRGG----ESVT- 174 (591)
T ss_dssp CCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEE--ETTCCEEEEECCS-TTCEEEEEEETT----EEEE-
T ss_pred ccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEEecCC----ceEE-
Confidence 00111100 01111124578899999999999888554 9999999998752 466888887421 2357
Q ss_pred EEeCeEEEcccCCC
Q 020533 136 YSGRFLVVASGETT 149 (325)
Q Consensus 136 ~~ad~vIiAtG~~~ 149 (325)
+.||.||.|+|.++
T Consensus 175 i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 175 VESDFVIDAGGSGG 188 (591)
T ss_dssp EEESEEEECCGGGC
T ss_pred EEcCEEEECCCCcc
Confidence 99999999999765
No 127
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.18 E-value=2.8e-10 Score=108.83 Aligned_cols=138 Identities=12% Similarity=0.074 Sum_probs=87.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeec-----------------------C---
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHL-----------------------A--- 59 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~-----------------------~--- 59 (325)
..+||+|||||++||++|..|++.|.+|+|||+.+.+||......- ++.... .
T Consensus 120 ~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~g-g~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 120 ETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAG-GMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCS-CEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCc-eeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 3579999999999999999999999999999999988764221100 000000 0
Q ss_pred --C-------------------CccCC------CCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEE
Q 020533 60 --K-------------------QFCQL------PHLPFPSSY---PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESA 109 (325)
Q Consensus 60 --~-------------------~~~~~------~~~~~~~~~---~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i 109 (325)
. .-..+ ....++... ........+.+.|.+.+++.++.. +++++|+++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i--~~~~~v~~l 276 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDT--RLNSRVVKL 276 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCE--ECSEEEEEE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCCEE--EeCCEEEEE
Confidence 0 00000 000011000 011346788899999999988665 999999999
Q ss_pred EEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 110 SYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 110 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
..+++...+.|.+.+.++ +... +.+|.||+|||.++.
T Consensus 277 ~~~~~g~v~Gv~~~~~~g---~~~~-i~A~~VVlAtGg~s~ 313 (566)
T 1qo8_A 277 VVNDDHSVVGAVVHGKHT---GYYM-IGAKSVVLATGGYGM 313 (566)
T ss_dssp EECTTSBEEEEEEEETTT---EEEE-EEEEEEEECCCCCTT
T ss_pred EECCCCcEEEEEEEeCCC---cEEE-EEcCEEEEecCCccc
Confidence 875322223455553221 3347 899999999998764
No 128
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.18 E-value=3.5e-10 Score=103.76 Aligned_cols=137 Identities=18% Similarity=0.174 Sum_probs=86.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCCCCCCccCCC--------------C----------CCceEeecCC-
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILERENCYASIWKKY--------------S----------YDRLRLHLAK- 60 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~-v~v~e~~~~~Gg~w~~~--------------~----------y~~~~~~~~~- 60 (325)
.+||+|||||++||++|..|++.|++ |+|||+.+.++...... . ...+......
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~g 83 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQSG 83 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTTS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCCC
Confidence 47999999999999999999999999 99999988654321110 0 0001111000
Q ss_pred -CccCCCCC-CCCCCCC-CCCCHHHHHHHHHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEE
Q 020533 61 -QFCQLPHL-PFPSSYP-MFVSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYY 136 (325)
Q Consensus 61 -~~~~~~~~-~~~~~~~-~~~~~~~~~~yl~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~ 136 (325)
.....+.. ......+ ....+.++.++|.+.+.+ .+. ..++++++|++++. + +.++|++.+..++ +..+ +
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~-~~v~~~~~v~~i~~-~--~~v~v~~~~~~~g--~~~~-~ 156 (410)
T 3c96_A 84 ATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQ-QAVRTGLGVERIEE-R--DGRVLIGARDGHG--KPQA-L 156 (410)
T ss_dssp CEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCT-TSEEESEEEEEEEE-E--TTEEEEEEEETTS--CEEE-E
T ss_pred CEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCC-cEEEECCEEEEEec-C--CccEEEEecCCCC--CceE-E
Confidence 00000000 0000011 234678899999988876 352 23599999999987 4 4688887762111 2257 8
Q ss_pred EeCeEEEcccCCCC
Q 020533 137 SGRFLVVASGETTN 150 (325)
Q Consensus 137 ~ad~vIiAtG~~~~ 150 (325)
.+|.||.|+|.+|.
T Consensus 157 ~ad~vV~AdG~~S~ 170 (410)
T 3c96_A 157 GADVLVGADGIHSA 170 (410)
T ss_dssp EESEEEECCCTTCH
T ss_pred ecCEEEECCCccch
Confidence 99999999998764
No 129
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.18 E-value=8e-11 Score=109.53 Aligned_cols=133 Identities=11% Similarity=0.088 Sum_probs=85.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC--CCccCCCC-----------C-----------CceEeecCCCc
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY--ASIWKKYS-----------Y-----------DRLRLHLAKQF 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~--Gg~w~~~~-----------y-----------~~~~~~~~~~~ 62 (325)
.+||+|||||++|+++|..|++.|++|+|+|+.+.. |..+.... . .+.....+...
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 479999999999999999999999999999998753 22222100 0 00001000000
Q ss_pred cCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeE
Q 020533 63 CQLPHLPFPSSYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFL 141 (325)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~v 141 (325)
.. .+++. ......+.++.+.|.+.+.+.++. ++++++|+++..++ +.+. |++.+...+ +..+ +.||.|
T Consensus 86 ~~---~~~~~-~~~~i~r~~l~~~L~~~a~~~gv~--i~~~~~v~~i~~~~--~~v~gv~~~~~~~G--~~~~-~~ad~V 154 (453)
T 3atr_A 86 TV---WTVNG-EGFELNAPLYNQRVLKEAQDRGVE--IWDLTTAMKPIFED--GYVKGAVLFNRRTN--EELT-VYSKVV 154 (453)
T ss_dssp CE---EEEEE-EEEEECHHHHHHHHHHHHHHTTCE--EESSEEEEEEEEET--TEEEEEEEEETTTT--EEEE-EECSEE
T ss_pred eE---EeECC-CcEEEcHHHHHHHHHHHHHHcCCE--EEeCcEEEEEEEEC--CEEEEEEEEEcCCC--ceEE-EEcCEE
Confidence 00 00000 012356788999999999887754 49999999998764 4443 555532111 2247 899999
Q ss_pred EEcccCCCC
Q 020533 142 VVASGETTN 150 (325)
Q Consensus 142 IiAtG~~~~ 150 (325)
|.|+|.++.
T Consensus 155 V~AdG~~s~ 163 (453)
T 3atr_A 155 VEATGYSRS 163 (453)
T ss_dssp EECCGGGCT
T ss_pred EECcCCchh
Confidence 999997664
No 130
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.17 E-value=1.7e-10 Score=112.56 Aligned_cols=132 Identities=14% Similarity=0.223 Sum_probs=86.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC--CccCCCC--CC------------------------------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA--SIWKKYS--YD------------------------------ 52 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~G--g~w~~~~--y~------------------------------ 52 (325)
.+||+|||||++|+++|..|+++|.+|+|+|+++.+| .+++... ++
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 351 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVK 351 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCC
Confidence 4799999999999999999999999999999986665 2332210 00
Q ss_pred ------ceE-eecCCC-------cc--CCCCC--------------CCCCC-------CCCCCCHHHHHHHHHHHHHHcC
Q 020533 53 ------RLR-LHLAKQ-------FC--QLPHL--------------PFPSS-------YPMFVSRAQFIEHLDHYVSHFN 95 (325)
Q Consensus 53 ------~~~-~~~~~~-------~~--~~~~~--------------~~~~~-------~~~~~~~~~~~~yl~~~a~~~~ 95 (325)
+.. +..... +. .++.. +.+.. .........+...+.+.+++.|
T Consensus 352 ~~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~G 431 (676)
T 3ps9_A 352 FDHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQG 431 (676)
T ss_dssp CCEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHTT
T ss_pred cCcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhCC
Confidence 000 000000 00 00000 00000 0112345778888888888888
Q ss_pred CCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 96 IGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 96 l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+. ++++++|+++..++ +.|.|++.++ .+ +.||.||+|+|.++.
T Consensus 432 v~--i~~~t~V~~l~~~~--~~v~V~t~~G-------~~-i~Ad~VVlAtG~~s~ 474 (676)
T 3ps9_A 432 LQ--IYYQYQLQNFSRKD--DCWLLNFAGD-------QQ-ATHSVVVLANGHQIS 474 (676)
T ss_dssp CE--EEESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCGGGGG
T ss_pred CE--EEeCCeeeEEEEeC--CeEEEEECCC-------CE-EECCEEEECCCcchh
Confidence 65 49999999998876 5688877653 46 899999999998654
No 131
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.17 E-value=3.5e-10 Score=109.91 Aligned_cols=145 Identities=14% Similarity=0.207 Sum_probs=90.6
Q ss_pred CCCCC-CCCeEEEECCChHHHHHHHHHHh-----cCCCeEEEecCCCCCCccCC------------------------CC
Q 020533 1 MKEQA-AGVEVIMVGAGTSGLATAACLSL-----QSIPYVILERENCYASIWKK------------------------YS 50 (325)
Q Consensus 1 M~~~~-~~~~v~IIGaG~~Gl~~a~~L~~-----~g~~v~v~e~~~~~Gg~w~~------------------------~~ 50 (325)
|...+ ..+||+||||||+||++|..|++ .|++|+|||+.+......+. ..
T Consensus 1 m~~~~~~~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~ 80 (665)
T 1pn0_A 1 MTKYSESYCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEAND 80 (665)
T ss_dssp -CCEEEEEEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBC
T ss_pred CCCCCCCCCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccc
Confidence 44333 35799999999999999999999 99999999997643211110 01
Q ss_pred CCceEeecCC---Ccc---CCCCCC--CCCCCCCCCCHHHHHHHHHHHHHHcC---CCceeeeCeEEEEEEEcC------
Q 020533 51 YDRLRLHLAK---QFC---QLPHLP--FPSSYPMFVSRAQFIEHLDHYVSHFN---IGPSIRYQRSVESASYDE------ 113 (325)
Q Consensus 51 y~~~~~~~~~---~~~---~~~~~~--~~~~~~~~~~~~~~~~yl~~~a~~~~---l~~~i~~~~~V~~i~~~~------ 113 (325)
+..+....+. ... .++... .........++..+.++|.+.+.+.+ +. +++++++++++.++
T Consensus 81 ~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~--v~~g~~v~~~~~d~~~~~~~ 158 (665)
T 1pn0_A 81 MSTIALYNPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIK--VERPLIPEKMEIDSSKAEDP 158 (665)
T ss_dssp CCEEEEEEECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSC--EECSEEEEEEEECGGGTTCT
T ss_pred cceEEEEeCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceE--EEeCCEEEEEEecCcccccC
Confidence 1122221111 000 010000 00011123678899999999998876 44 49999999998764
Q ss_pred CCCcEEEEEeec---------------------------------------CCCCceeEEEEEeCeEEEcccCCCC
Q 020533 114 ATNMWNVKASNL---------------------------------------LSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 114 ~~~~~~v~~~~~---------------------------------------~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+...+++++.+. ..+ +..+ ++||+||.|+|.+|.
T Consensus 159 ~~~~V~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G--~~~~-i~A~~VVGADG~~S~ 231 (665)
T 1pn0_A 159 EAYPVTMTLRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAG--EIET-VHCKYVIGCDGGHSW 231 (665)
T ss_dssp TCCCEEEEEEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTT--CEEE-EEEEEEEECCCTTCH
T ss_pred CCCCEEEEEEecccccccccccccccccccccccccccccccccccccccCCCC--ceEE-EEeCEEEeccCCCCH
Confidence 123577766542 111 2257 899999999998764
No 132
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.17 E-value=1.2e-10 Score=106.38 Aligned_cols=129 Identities=19% Similarity=0.266 Sum_probs=76.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC-------CC---------C---C-----------CceEee
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK-------KY---------S---Y-----------DRLRLH 57 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~-------~~---------~---y-----------~~~~~~ 57 (325)
.+|+||||||+||++|..|+++|++|+||||.+.+...-. .+ . + ......
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 4899999999999999999999999999999875421100 00 0 0 000000
Q ss_pred cC-CCccCCCC--CCCCCCCC----CCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCc
Q 020533 58 LA-KQFCQLPH--LPFPSSYP----MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGR 130 (325)
Q Consensus 58 ~~-~~~~~~~~--~~~~~~~~----~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~ 130 (325)
.. ........ .+...... ....+.++.+.|.+ .+...|++++++++++..+ ++.++|++.++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~-----~~~~~v~~~~~v~~~~~~~-~~~v~v~~~dG----- 150 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNK-----GLANTIQWNKTFVRYEHIE-NGGIKIFFADG----- 150 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHT-----TCTTTEECSCCEEEEEECT-TSCEEEEETTS-----
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHh-----hccceEEEEEEEEeeeEcC-CCeEEEEECCC-----
Confidence 00 00000000 00000000 01234555554433 2344579999999998764 45678888775
Q ss_pred eeEEEEEeCeEEEcccCCCC
Q 020533 131 EIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 131 ~~~~~~~ad~vIiAtG~~~~ 150 (325)
.+ +++|.||.|.|.+|.
T Consensus 151 --~~-~~adlvVgADG~~S~ 167 (412)
T 4hb9_A 151 --SH-ENVDVLVGADGSNSK 167 (412)
T ss_dssp --CE-EEESEEEECCCTTCH
T ss_pred --CE-EEeeEEEECCCCCcc
Confidence 56 899999999998763
No 133
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.16 E-value=1.3e-10 Score=104.50 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
....+.+.+.+.+++.|... +++++|++++.++ ++.|.|.+.++. ..+ +.||.||+|+|.++
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g~-----~~~-~~a~~VV~A~G~~s 209 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGAQL--VFHTPLIAGRVRP-EGGFELDFGGAE-----PMT-LSCRVLINAAGLHA 209 (369)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECT-TSSEEEEECTTS-----CEE-EEEEEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--ECCCEEEEEEEcC-CceEEEEECCCc-----eeE-EEeCEEEECCCcch
Confidence 45688888888898888654 8999999998864 344888776542 257 89999999999765
No 134
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.16 E-value=1.6e-10 Score=104.45 Aligned_cols=64 Identities=13% Similarity=0.228 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCC
Q 020533 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDI 156 (325)
Q Consensus 80 ~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~ 156 (325)
...+.+.+.+.+++.++. ++++++|++++.++ +.|.|++.+ .+ +.||.||+|+|.++....+.+
T Consensus 148 ~~~l~~~l~~~~~~~G~~--i~~~~~V~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~a~G~~s~~l~~~l 211 (372)
T 2uzz_A 148 SELAIKTWIQLAKEAGCA--QLFNCPVTAIRHDD--DGVTIETAD--------GE-YQAKKAIVCAGTWVKDLLPEL 211 (372)
T ss_dssp HHHHHHHHHHHHHHTTCE--EECSCCEEEEEECS--SSEEEEESS--------CE-EEEEEEEECCGGGGGGTSTTC
T ss_pred HHHHHHHHHHHHHHCCCE--EEcCCEEEEEEEcC--CEEEEEECC--------Ce-EEcCEEEEcCCccHHhhcccc
Confidence 457888888888888865 48999999998765 458776654 35 899999999998765444433
No 135
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.12 E-value=2.9e-10 Score=103.09 Aligned_cols=61 Identities=16% Similarity=0.078 Sum_probs=47.5
Q ss_pred CCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 77 FVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 77 ~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.....++.+.+.+.+++.++. ++++++|++++.++ +.|.|++.+ .+ +.+|.||+|+|.++.
T Consensus 160 ~~~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~s~ 220 (382)
T 1ryi_A 160 HVEPYFVCKAYVKAAKMLGAE--IFEHTPVLHVERDG--EALFIKTPS--------GD-VWANHVVVASGVWSG 220 (382)
T ss_dssp BCCHHHHHHHHHHHHHHTTCE--EETTCCCCEEECSS--SSEEEEETT--------EE-EEEEEEEECCGGGTH
T ss_pred EEcHHHHHHHHHHHHHHCCCE--EEcCCcEEEEEEEC--CEEEEEcCC--------ce-EEcCEEEECCChhHH
Confidence 345678899999999988854 48999999998754 567676543 46 899999999997653
No 136
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.11 E-value=3e-10 Score=108.50 Aligned_cols=169 Identities=17% Similarity=0.142 Sum_probs=102.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC-CCCCccCCCCCCceEee-----------cCCC--------ccCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN-CYASIWKKYSYDRLRLH-----------LAKQ--------FCQL 65 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~-~~Gg~w~~~~y~~~~~~-----------~~~~--------~~~~ 65 (325)
..+||+|||||++|+++|..|++.|.+|+|+|++. .+|+.+.. +..... .... ...+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~---ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f 96 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN---PAIGGVAKGQITREIDALGGEMGKAIDATGIQF 96 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC---SEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc---cchhhhhHHHHHHHHHhcccHHHHHHHhcCCch
Confidence 45899999999999999999999999999999985 45543321 110000 0000 0000
Q ss_pred CC---CCCCCC--CCCCCCHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEe
Q 020533 66 PH---LPFPSS--YPMFVSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSG 138 (325)
Q Consensus 66 ~~---~~~~~~--~~~~~~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~a 138 (325)
.. ...+.. ......+..+.+++.+.++++ ++. .++.+|+.+..++ +.+. |.+.++ .. +.|
T Consensus 97 ~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~---I~~~~V~~L~~d~--g~V~GV~t~~G-------~~-i~A 163 (641)
T 3cp8_A 97 RMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNID---LLQDTVIGVSANS--GKFSSVTVRSG-------RA-IQA 163 (641)
T ss_dssp EEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEE---EEECCEEEEEEET--TEEEEEEETTS-------CE-EEE
T ss_pred hhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCE---EEeeEEEEEEecC--CEEEEEEECCC-------cE-EEe
Confidence 00 000000 001235668888888888875 654 3566888887654 4443 655443 46 899
Q ss_pred CeEEEcccCCCCCCCCCCCCccccccCCCCCccEEecCCCCCCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEe
Q 020533 139 RFLVVASGETTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVR 217 (325)
Q Consensus 139 d~vIiAtG~~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r 217 (325)
|.||+|||.++. .+.++|...+ .+ .++ +| +.++.+++..|.+.|.++..+..
T Consensus 164 d~VVLATG~~s~--~~i~~G~~~~------~~----------------g~~--vG-~~~a~~la~~L~~~G~kv~~l~t 215 (641)
T 3cp8_A 164 KAAILACGTFLN--GLIHIGMDHF------PG----------------GRS--TA-EPPVEGLTESLASLGFSFGRLKT 215 (641)
T ss_dssp EEEEECCTTCBT--CEEEETTEEE------EC----------------SSS--TT-SCCBCSHHHHHHHTTCCEEEEEE
T ss_pred CEEEECcCCCCC--ccceeeeeee------cc----------------ccc--cC-CchhhhhHHHHHhCCceEEeecC
Confidence 999999995433 2223343332 11 111 13 57788999999999998866543
No 137
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.10 E-value=5.9e-10 Score=109.01 Aligned_cols=60 Identities=10% Similarity=0.202 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeE-EEEEeCeEEEcccCCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTN 150 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~~~ad~vIiAtG~~~~ 150 (325)
....+.+.+.+.+++.|+. ++++++|+++..++ +.|.|++.++ . + +.||.||+|+|.++.
T Consensus 410 ~p~~l~~aL~~~a~~~Gv~--i~~~t~V~~l~~~~--~~v~V~t~~G-------~~~-i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 410 CPSDLTHALMMLAQQNGMT--CHYQHELQRLKRID--SQWQLTFGQS-------QAA-KHHATVILATGHRLP 470 (689)
T ss_dssp CHHHHHHHHHHHHHHTTCE--EEESCCEEEEEECS--SSEEEEEC-C-------CCC-EEESEEEECCGGGTT
T ss_pred CHHHHHHHHHHHHHhCCCE--EEeCCeEeEEEEeC--CeEEEEeCCC-------cEE-EECCEEEECCCcchh
Confidence 4567888888888888865 49999999998875 5688887654 3 6 899999999998754
No 138
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.10 E-value=3.8e-10 Score=102.37 Aligned_cols=59 Identities=10% Similarity=0.035 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.....+.+.+.+.+++.++. ++++++|++++.++ +.|. |++.+ .+ +.||.||+|+|.++
T Consensus 146 ~~~~~l~~~l~~~~~~~Gv~--i~~~~~v~~i~~~~--~~v~gv~~~~--------g~-i~a~~VV~A~G~~s 205 (382)
T 1y56_B 146 ADPFEATTAFAVKAKEYGAK--LLEYTEVKGFLIEN--NEIKGVKTNK--------GI-IKTGIVVNATNAWA 205 (382)
T ss_dssp ECHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESS--SBEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred ECHHHHHHHHHHHHHHCCCE--EECCceEEEEEEEC--CEEEEEEECC--------cE-EECCEEEECcchhH
Confidence 45678888898889888865 48999999998764 5676 76543 46 89999999999764
No 139
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.08 E-value=1.3e-09 Score=103.84 Aligned_cols=65 Identities=18% Similarity=0.100 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
....+...+.+.+.+.|... +++++|+++..++ +..|.|++.+..++ +... +.|+.||+|+|.++
T Consensus 168 d~~~l~~~L~~~a~~~G~~i--~~~~~V~~l~~~~-g~v~gV~~~d~~tg--~~~~-i~A~~VV~AaG~~s 232 (561)
T 3da1_A 168 DDARLTLEIMKEAVARGAVA--LNYMKVESFIYDQ-GKVVGVVAKDRLTD--TTHT-IYAKKVVNAAGPWV 232 (561)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--EESEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEEEEEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCCEEEEEEEcC-CeEEEEEEEEcCCC--ceEE-EECCEEEECCCcch
Confidence 45677788888888888654 9999999998864 23466888764333 2367 99999999999765
No 140
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.08 E-value=1.7e-10 Score=104.37 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.7
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
....+...|.+.+++.|... +++++|++++.++ +.|.|++.+ .+ +.||.||+|+|.++
T Consensus 152 ~~~~~~~~l~~~a~~~Gv~i--~~~~~V~~i~~~~--~~~~V~t~~--------g~-i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQGQV--LCNHEALEIRRVD--GAWEVRCDA--------GS-YRAAVLVNAAGAWC 209 (381)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSCCCCEEEEET--TEEEEECSS--------EE-EEESEEEECCGGGH
T ss_pred CHHHHHHHHHHHHHHCCCEE--EcCCEEEEEEEeC--CeEEEEeCC--------CE-EEcCEEEECCChhH
Confidence 45778888888888888654 8999999998875 558887754 46 89999999999765
No 141
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.07 E-value=5.3e-10 Score=99.07 Aligned_cols=139 Identities=17% Similarity=0.243 Sum_probs=81.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCC-CccCCCC-CCceEeecCCCccCCC--CCCCCC--CCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYA-SIWKKYS-YDRLRLHLAKQFCQLP--HLPFPS--SYPMFV 78 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~G-g~w~~~~-y~~~~~~~~~~~~~~~--~~~~~~--~~~~~~ 78 (325)
.+||+|||||++|+++|..|+++ |++|+|+|+.+.+| |.|.... +....+. +.....+. ..++.. .+....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~-~~~~~~L~~~Gv~~~~~G~~~~~~ 157 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMR-KPADVFLDEVGVPYEDEGDYVVVK 157 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEE-TTTHHHHHHHTCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcc-hHHHHHHHHcCCcccccCCeEEEe
Confidence 57999999999999999999997 99999999998776 4664322 2222222 11100000 001100 111112
Q ss_pred CHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcCC---------------CCcEE---EEEee----cCCCC---cee
Q 020533 79 SRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEA---------------TNMWN---VKASN----LLSPG---REI 132 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~---------------~~~~~---v~~~~----~~~~~---~~~ 132 (325)
...++.+.|.+.+.+. ++ .++++++|+++..+++ .+... |.+.. ..+.. .+.
T Consensus 158 ~~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~ 235 (344)
T 3jsk_A 158 HAALFTSTVLSKVLQRPNV--KLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDP 235 (344)
T ss_dssp CHHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBC
T ss_pred cHHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCc
Confidence 3466777777777763 54 4589999998876541 02111 22210 01100 022
Q ss_pred EEEEEeCeEEEcccCCC
Q 020533 133 EEYYSGRFLVVASGETT 149 (325)
Q Consensus 133 ~~~~~ad~vIiAtG~~~ 149 (325)
.+ +++++||+|||+.+
T Consensus 236 ~~-i~Ak~VV~ATG~~s 251 (344)
T 3jsk_A 236 NT-INAPVIISTTGHDG 251 (344)
T ss_dssp EE-EECSEEEECCCSSS
T ss_pred eE-EEcCEEEECCCCCc
Confidence 67 99999999999754
No 142
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.06 E-value=2.1e-09 Score=101.50 Aligned_cols=61 Identities=15% Similarity=0.197 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeC-eEEEcccCCC
Q 020533 82 QFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGR-FLVVASGETT 149 (325)
Q Consensus 82 ~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad-~vIiAtG~~~ 149 (325)
.+.+.|.+.+++.++. ++++++|+++..+++....-|.+.+.. +..+ +.|+ .||+|||.++
T Consensus 203 ~l~~~L~~~~~~~Gv~--i~~~t~v~~L~~~~~g~v~GV~~~~~g----~~~~-i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVR--AEYDMRVQTLVTDDTGRVVGIVAKQYG----KEVA-VRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCE--EECSEEEEEEEECTTCCEEEEEEEETT----EEEE-EEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCE--EEecCEeEEEEECCCCcEEEEEEEECC----cEEE-EEeCCeEEEeCCChh
Confidence 8889999999988855 499999999988642333446665432 3357 8995 9999999876
No 143
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.06 E-value=6.6e-10 Score=100.91 Aligned_cols=59 Identities=14% Similarity=0.140 Sum_probs=46.2
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
...++.+.+.+.+++.++.. +++++|++++.++ +.|.|++.+ .+ +.||.||+|+|.++.
T Consensus 148 ~~~~~~~~l~~~~~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------g~-~~a~~vV~A~G~~~~ 206 (389)
T 2gf3_A 148 FSENCIRAYRELAEARGAKV--LTHTRVEDFDISP--DSVKIETAN--------GS-YTADKLIVSMGAWNS 206 (389)
T ss_dssp EHHHHHHHHHHHHHHTTCEE--ECSCCEEEEEECS--SCEEEEETT--------EE-EEEEEEEECCGGGHH
T ss_pred eHHHHHHHHHHHHHHCCCEE--EcCcEEEEEEecC--CeEEEEeCC--------CE-EEeCEEEEecCccHH
Confidence 34688888888898888654 8999999998865 457776543 46 899999999997643
No 144
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.04 E-value=3.1e-09 Score=100.06 Aligned_cols=64 Identities=19% Similarity=0.183 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
....+...+.+.+.+.|... +++++|+++..++ +.|.|++.+..++ +..+ +.||.||+|+|.++
T Consensus 147 ~~~~l~~~l~~~a~~~Gv~i--~~~~~V~~l~~~~--~~~~V~~~d~~~G--~~~~-i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 147 DDARLVLANAQMVVRKGGEV--LTRTRATSARREN--GLWIVEAEDIDTG--KKYS-WQARGLVNATGPWV 210 (501)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESCEEECCGGGH
T ss_pred cHHHHHHHHHHHHHHcCCEE--EcCcEEEEEEEeC--CEEEEEEEECCCC--CEEE-EECCEEEECCChhH
Confidence 46778888888888888654 8999999998865 6788888653222 2247 89999999999765
No 145
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.04 E-value=6.4e-10 Score=101.44 Aligned_cols=57 Identities=18% Similarity=0.126 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 80 RAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 80 ~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
...+...+.+.+++.++. ++++++|++++.++ +.|.|++.+ .+ +.||.||+|+|.++
T Consensus 152 ~~~~~~~l~~~a~~~Gv~--i~~~~~V~~i~~~~--~~v~v~t~~--------g~-i~a~~VV~A~G~~s 208 (397)
T 2oln_A 152 VRGTLAALFTLAQAAGAT--LRAGETVTELVPDA--DGVSVTTDR--------GT-YRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHHHTTCE--EEESCCEEEEEEET--TEEEEEESS--------CE-EEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHHcCCE--EECCCEEEEEEEcC--CeEEEEECC--------CE-EEcCEEEEcCCcCh
Confidence 356777788888888855 49999999998765 567776533 36 89999999999763
No 146
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.03 E-value=3.3e-09 Score=101.43 Aligned_cols=137 Identities=16% Similarity=0.120 Sum_probs=86.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEe------------ecCCCc------------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRL------------HLAKQF------------ 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~------------~~~~~~------------ 62 (325)
.+||+|||+|++||++|..|++.|.+|+|+|+.+.+||...... .++.. +....+
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~-gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAA-GGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCC-SCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhC-CeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 56999999999999999999999999999999998887532210 00000 000000
Q ss_pred -----------------------cCCC------CCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEE
Q 020533 63 -----------------------CQLP------HLPFPSSY---PMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESAS 110 (325)
Q Consensus 63 -----------------------~~~~------~~~~~~~~---~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~ 110 (325)
..+. ...++... ........+.+.|.+.+++.++. ++++++|+++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~--i~~~t~v~~l~ 282 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTD--IRLNSRVVRIL 282 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTCE--EESSEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCCe--EEecCEEEEEE
Confidence 0000 00000000 01123668889999999988865 49999999997
Q ss_pred EcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 111 YDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 111 ~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.+++...+.|.+.+.++ +... +.+|.||+|||.++.
T Consensus 283 ~~~~g~v~GV~~~~~~G---~~~~-i~A~~VVlAtGg~~~ 318 (572)
T 1d4d_A 283 EDASGKVTGVLVKGEYT---GYYV-IKADAVVIAAGGFAK 318 (572)
T ss_dssp EC--CCEEEEEEEETTT---EEEE-EECSEEEECCCCCTT
T ss_pred ECCCCeEEEEEEEeCCC---cEEE-EEcCEEEEeCCCCcc
Confidence 65323334566654221 3357 899999999997653
No 147
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.02 E-value=5.9e-10 Score=101.77 Aligned_cols=60 Identities=10% Similarity=0.073 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
.....+.+.+.+.+++.++. ++++++|+++..++ +..|.|++.+ .+ +.+|.||+|+|.++
T Consensus 171 ~~~~~~~~~l~~~~~~~g~~--i~~~~~v~~i~~~~-~~~~~v~~~~--------g~-~~a~~vV~a~G~~s 230 (405)
T 2gag_B 171 AKHDHVAWAFARKANEMGVD--IIQNCEVTGFIKDG-EKVTGVKTTR--------GT-IHAGKVALAGAGHS 230 (405)
T ss_dssp CCHHHHHHHHHHHHHHTTCE--EECSCCEEEEEESS-SBEEEEEETT--------CC-EEEEEEEECCGGGH
T ss_pred CCHHHHHHHHHHHHHHCCCE--EEcCCeEEEEEEeC-CEEEEEEeCC--------ce-EECCEEEECCchhH
Confidence 34568888898889888855 49999999998764 2346676654 24 88999999999754
No 148
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.00 E-value=4.1e-10 Score=96.36 Aligned_cols=50 Identities=18% Similarity=0.288 Sum_probs=43.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEee
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLH 57 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~ 57 (325)
+||+||||||+||++|..|+++|++|+||||++.+||.+.....++..++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~~~~~~~~~d 52 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALD 52 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccccccCCceee
Confidence 78999999999999999999999999999999999998765544444443
No 149
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.00 E-value=8.6e-10 Score=101.46 Aligned_cols=40 Identities=28% Similarity=0.387 Sum_probs=37.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
+||+|||||++||++|+.|+++|.+|+|+|+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 4899999999999999999999999999999999987544
No 150
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.00 E-value=1.3e-09 Score=100.55 Aligned_cols=40 Identities=28% Similarity=0.290 Sum_probs=37.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
+||+|||||++|+++|+.|+++|.+|+|+|+++.+||...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 6999999999999999999999999999999998988543
No 151
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.99 E-value=6.4e-10 Score=103.90 Aligned_cols=195 Identities=10% Similarity=0.006 Sum_probs=104.8
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCc--cCCCCC-----C--ceE-------------ee---------
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENCYASI--WKKYSY-----D--RLR-------------LH--------- 57 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~--w~~~~y-----~--~~~-------------~~--------- 57 (325)
||+|||||++|+++|..|++.|.+|+|+||. ..+|. |..... + ... ++
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g~s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~~ 79 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGGSTPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVTS 79 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCSSGGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCchHHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHHH
Confidence 7999999999999999999999999999999 45553 111100 0 000 00
Q ss_pred -cCC-------CccCCCC-------CCCCCC-CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcE-EE
Q 020533 58 -LAK-------QFCQLPH-------LPFPSS-YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NV 120 (325)
Q Consensus 58 -~~~-------~~~~~~~-------~~~~~~-~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~-~v 120 (325)
.+. .-..|.. ..++.. ........++.+.|.+.+++.++.. +++++| ++..++ +.. -+
T Consensus 80 ~~~~~i~~l~~~Gv~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i--~~~~~v-~l~~~~--~~v~Gv 154 (472)
T 2e5v_A 80 EAKNVIETFESWGFEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPI--IEDRLV-EIRVKD--GKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHTTCCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCE--ECCCEE-EEEEET--TEEEEE
T ss_pred HHHHHHHHHHHcCCCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEE--EECcEE-EEEEeC--CEEEEE
Confidence 000 0000100 000000 0011235678888888887778665 899999 887654 332 23
Q ss_pred EEeecCCCCceeEEEEEeCeEEEcccCCCCCCCCCCC-CccccccCCCCCccEEecC-----CCCCCCCCCC-CeEEEEC
Q 020533 121 KASNLLSPGREIEEYYSGRFLVVASGETTNPFTPDIR-GLCSFCSSATGTGEVIHST-----QYKNGKPYGG-KNVLVVG 193 (325)
Q Consensus 121 ~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p~~~-g~~~~~~~~~~~g~~~~~~-----~~~~~~~~~~-~~v~VvG 193 (325)
...+. + .+ +.+|.||+|||.++ ..+.++ +.... .|.-+... ...+....+. ..++++|
T Consensus 155 ~v~~~-~-----g~-~~a~~VVlAtGg~~--~~~~~~~~~~~~------tGdgi~~a~~aGa~~~d~e~~q~~p~~~~~g 219 (472)
T 2e5v_A 155 VTEKR-G-----LV-EDVDKLVLATGGYS--YLYEYSSTQSTN------IGDGMAIAFKAGTILADMEFVQFHPTVTSLD 219 (472)
T ss_dssp EETTT-E-----EE-CCCSEEEECCCCCG--GGSSSBSSCTTC------SCHHHHHHHHTTCCEECTTCEEEEEEEECGG
T ss_pred EEEeC-C-----Ce-EEeeeEEECCCCCc--ccCccccCCCCC------chHHHHHHHHcCCCEeCCcceEEEeEEEccC
Confidence 33321 1 45 78999999999543 333331 11111 22211100 0111111111 1344557
Q ss_pred cCCCHHHHHHHHhhccCeEEEEEecCCeeechhhH
Q 020533 194 SGNSGMEIALDLANHAAKTSLVVRSPVHVLSREMV 228 (325)
Q Consensus 194 ~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p~~~~ 228 (325)
+| +.+++..+...|..+ +..+.. .++++++.
T Consensus 220 gg--~~~~ae~~~~~G~~~-v~~~g~-rf~~~~~~ 250 (472)
T 2e5v_A 220 GE--VFLLTETLRGEGAQI-INENGE-RFLFNYDK 250 (472)
T ss_dssp GC--CEECCTHHHHTTCEE-EETTCC-CGGGGTCT
T ss_pred CC--ceeeehhhcCCceEE-ECCCCC-CCCccCCc
Confidence 66 777777777778766 444444 67776543
No 152
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.98 E-value=1.6e-09 Score=97.70 Aligned_cols=109 Identities=16% Similarity=0.178 Sum_probs=69.7
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC-CCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERE-NCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~-~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
...+||+|||||++||++|..|.+.|++|+|+|++ +.+||.|....... ..+..+ ......+......+ ...
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t~~~~~---~~~~~~-~~~~~~~e~G~~~~---~~~ 114 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKTFHAKK---GEPSPF-ADPAQYAEAGAMRL---PSF 114 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCEECCCT---TSCCSS-SSTTCCEESSCCCE---ETT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceeeecccc---cccccc-cCCCcEEecCceee---cch
Confidence 34689999999999999999999999999999999 99999877532211 011000 00000000000001 122
Q ss_pred HHHHHHHHHHcCCCceeeeCeE--------------EEEEEEcCCCCcEEEEE
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRS--------------VESASYDEATNMWNVKA 122 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~--------------V~~i~~~~~~~~~~v~~ 122 (325)
..++.++++++++..++.++.. +....|++ .+|++.+
T Consensus 115 ~~~~~~~~~~lGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~w~~~~ 165 (376)
T 2e1m_A 115 HPLTLALIDKLGLKRRLFFNVDIDPQTGNQDAPVPPVFYKSFKD--GKTWTNG 165 (376)
T ss_dssp CHHHHHHHHHTTCCEEEECSSCCCTTSSBCSSCCCCCEEECSST--TCEEESS
T ss_pred HHHHHHHHHHcCCCcceeeccccccccccccccccccceeeecc--ceeEecc
Confidence 4577888999999877666665 44566665 3676643
No 153
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.98 E-value=3.4e-10 Score=103.75 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=33.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~ 42 (325)
.+||+|||||++|+++|+.|+++ |++|+|+|+....
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~ 73 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLP 73 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 37999999999999999999999 9999999997643
No 154
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.97 E-value=1.1e-09 Score=101.94 Aligned_cols=39 Identities=21% Similarity=0.369 Sum_probs=36.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC------CCeEEEecCCCCCCc
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS------IPYVILERENCYASI 45 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g------~~v~v~e~~~~~Gg~ 45 (325)
++||+|||||++||++|..|+++| ++|+|+|+++.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999999999874
No 155
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.97 E-value=8.6e-10 Score=101.48 Aligned_cols=41 Identities=24% Similarity=0.451 Sum_probs=37.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
+||+|||||++||++|..|+++|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999999886543
No 156
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.94 E-value=8.1e-10 Score=104.98 Aligned_cols=62 Identities=8% Similarity=0.087 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
..+.++.++|.+.+++.++.. +++ +|++++.+++...+.|++.++ .+ +.+|.||.|+|.++.
T Consensus 162 i~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 162 FDAHLVADFLKRWAVERGVNR--VVD-EVVDVRLNNRGYISNLLTKEG-------RT-LEADLFIDCSGMRGL 223 (538)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-ECCSEEEECCGGGCC
T ss_pred EeHHHHHHHHHHHHHHCCCEE--EEe-eEeEEEEcCCCcEEEEEECCC-------cE-EEeCEEEECCCCchh
Confidence 456889999999999888654 888 799998754322356666543 46 899999999997654
No 157
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.94 E-value=2.4e-09 Score=94.28 Aligned_cols=104 Identities=22% Similarity=0.343 Sum_probs=65.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCC-CccCCC-CCCceEeecCC--CccCCCCCCCCC--CCCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYA-SIWKKY-SYDRLRLHLAK--QFCQLPHLPFPS--SYPMFV 78 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~G-g~w~~~-~y~~~~~~~~~--~~~~~~~~~~~~--~~~~~~ 78 (325)
.+||+|||||++|+++|..|++. |.+|+|+|+.+.+| |.|... .+....+.... .+..+ ..++.. .+....
T Consensus 65 ~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~-Gv~~~~~g~~~~~~ 143 (326)
T 2gjc_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQEL-EIPYEDEGDYVVVK 143 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHT-TCCCEECSSEEEES
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhh-CcccccCCCeEEEc
Confidence 35999999999999999999998 99999999998886 566422 12222222110 00000 001110 101112
Q ss_pred CHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcC
Q 020533 79 SRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDE 113 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~ 113 (325)
...++...|.+.+... ++. ++.+++|+++..++
T Consensus 144 ~~~~~~~~L~~~a~~~~GV~--i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 144 HAALFISTVLSKVLQLPNVK--LFNATCVEDLVTRP 177 (326)
T ss_dssp CHHHHHHHHHHHHHTSTTEE--EETTEEEEEEEECC
T ss_pred chHHHHHHHHHHHHHhcCcE--EEecceeeeeeecc
Confidence 4567777787777764 544 48899999998764
No 158
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.93 E-value=9.8e-09 Score=98.36 Aligned_cols=145 Identities=15% Similarity=0.108 Sum_probs=87.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC-c-cC-------CCC--CCceEe---e---cCCCc-
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS-I-WK-------KYS--YDRLRL---H---LAKQF- 62 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg-~-w~-------~~~--y~~~~~---~---~~~~~- 62 (325)
|..+...+||+|||||++||++|..|++.|.+|+|+||.+..+| + |. ... -+.... + .....
T Consensus 1 m~~~~~~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~~g~s~~a~GGi~~~~~~~~~ds~~~~~~d~~~~g~~~~ 80 (588)
T 2wdq_A 1 MKLPVREFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPTRSHTVSAQGGITVALGNTHEDNWEWHMYDTVKGSDYIG 80 (588)
T ss_dssp CCSCEEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCS
T ss_pred CCCccccCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCCCCcchhhCCccEEcCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 55555568999999999999999999999999999999876532 1 11 100 000000 0 00000
Q ss_pred ---------------------cCCCCCC----------CCCC--------C-CC-C---CCHHHHHHHHHHHHHHcCCCc
Q 020533 63 ---------------------CQLPHLP----------FPSS--------Y-PM-F---VSRAQFIEHLDHYVSHFNIGP 98 (325)
Q Consensus 63 ---------------------~~~~~~~----------~~~~--------~-~~-~---~~~~~~~~yl~~~a~~~~l~~ 98 (325)
...++.. .+.. . .. + .....+...|.+.+.+.++.
T Consensus 81 d~~~v~~~~~~~~~~i~~l~~~Gv~f~~~~~g~~~~~~~~g~~~~~~~~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~- 159 (588)
T 2wdq_A 81 DQDAIEYMCKTGPEAILELEHMGLPFSRLDDGRIYQRPFGGQSKNFGGEQAARTAAAADRTGHALLHTLYQQNLKNHTT- 159 (588)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTCSBCCCEECSTTCHHHHHHHHHHHHHHHTTCE-
T ss_pred CHHHHHHHHHhHHHHHHHHHHcCCCcccCCCCcEeeeecCCccccccccCcceEEEcCCCCHHHHHHHHHHHHHhCCCE-
Confidence 0000000 0000 0 00 0 12367888888888888754
Q ss_pred eeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 99 SIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 99 ~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
++++++|+++..+++...+.|...+..++ +... +.++.||+|||.++.
T Consensus 160 -i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g--~~~~-i~A~~VVlAtGg~~~ 207 (588)
T 2wdq_A 160 -IFSEWYALDLVKNQDGAVVGCTALCIETG--EVVY-FKARATVLATGGAGR 207 (588)
T ss_dssp -EEETEEEEEEEECTTSCEEEEEEEETTTC--CEEE-EEEEEEEECCCCCGG
T ss_pred -EEeCcEEEEEEECCCCEEEEEEEEEcCCC--eEEE-EEcCEEEECCCCCcc
Confidence 59999999998753233445665442222 3357 899999999997653
No 159
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.88 E-value=2.4e-09 Score=100.85 Aligned_cols=58 Identities=19% Similarity=0.362 Sum_probs=45.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCCccCC-CCCCceEeec
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKK-YSYDRLRLHL 58 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~~~Gg~w~~-~~y~~~~~~~ 58 (325)
|+.+...+||+|||||++||+||+.|+++ |++|+|+|+++++||..+. ...++..++.
T Consensus 4 Ms~p~~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T~~~~~G~~~D~ 63 (513)
T 4gde_A 4 MTHPDISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLASTDVTPEGFLYDV 63 (513)
T ss_dssp --CCSEEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCEEECTTSCEEES
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeeeEEecCCEEEEe
Confidence 55555678999999999999999999884 9999999999999996543 2344555443
No 160
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.88 E-value=5e-09 Score=99.26 Aligned_cols=62 Identities=13% Similarity=0.220 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 78 VSRAQFIEHLDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
..+..+.++|.+.+++ .++.. +++ +|++++.+++...+.|++.++ .+ +.+|.||.|+|.++.
T Consensus 172 ~~r~~l~~~L~~~a~~~~Gv~i--~~~-~v~~i~~~~~g~~~~v~~~~g-------~~-i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 172 LNAAKFSQLLTEHCTQKLGVTH--IRD-HVSQIINNQHGDIEKLITKQN-------GE-ISGQLFIDCTGAKSL 234 (526)
T ss_dssp ECHHHHHHHHHHHHHHTSCCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECSGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCCEE--EEe-EEEEEEecCCCcEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 4678999999999998 78654 888 599998754222235555442 46 899999999997654
No 161
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.84 E-value=1.1e-08 Score=97.48 Aligned_cols=62 Identities=15% Similarity=0.165 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHc-CCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 78 VSRAQFIEHLDHYVSHF-NIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~~-~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
..+.++.++|.+.+++. |+.. +++ +|++++.+++...+.|++.++ .+ +.+|.||.|+|.++.
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv~i--~~~-~V~~i~~~~~g~~~~v~~~~G-------~~-i~ad~vI~A~G~~S~ 253 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGVRH--VED-RVEHVQRDANGNIESVRTATG-------RV-FDADLFVDCSGFRGL 253 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCCEE--EEC-CEEEEEECTTSCEEEEEETTS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHhcCCcEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EECCEEEECCCCchh
Confidence 57788999999999988 8654 888 899998754222355665543 56 899999999997654
No 162
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.82 E-value=9.7e-09 Score=95.86 Aligned_cols=39 Identities=28% Similarity=0.371 Sum_probs=36.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCCCCCCcc
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILERENCYASIW 46 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~~~Gg~w 46 (325)
+||+|||||++||++|++|+++|. +|+|+|+++++||..
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~ 43 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWI 43 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTC
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCce
Confidence 699999999999999999999999 999999999998854
No 163
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.82 E-value=1.8e-08 Score=96.28 Aligned_cols=65 Identities=17% Similarity=0.158 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 79 SRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 79 ~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
....+...+.+.+.+.|... +++++|+++..++ +..|.|++.+..++ +..+ +.|+.||+|+|.++
T Consensus 186 ~~~~l~~~l~~~a~~~Ga~i--~~~t~V~~l~~~~-~~v~gV~~~d~~tg--~~~~-i~A~~VV~AaG~ws 250 (571)
T 2rgh_A 186 NDARLVIDNIKKAAEDGAYL--VSKMKAVGFLYEG-DQIVGVKARDLLTD--EVIE-IKAKLVINTSGPWV 250 (571)
T ss_dssp CHHHHHHHHHHHHHHTTCEE--ESSEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEBSCEEECCGGGH
T ss_pred chHHHHHHHHHHHHHcCCeE--EeccEEEEEEEeC-CEEEEEEEEEcCCC--CEEE-EEcCEEEECCChhH
Confidence 34556666667778888654 8999999998865 23467777653222 2247 89999999999765
No 164
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.82 E-value=2.6e-08 Score=92.53 Aligned_cols=100 Identities=17% Similarity=0.179 Sum_probs=78.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|++.|.+|+++|+.+.+.. ....++.+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~---------------------------------~~~~~~~~~ 213 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILP---------------------------------TMDLEVSRA 213 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875310 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|++++.++ +.+.+++.++ .+ +.+|.||+|+|. .|+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~~D~vv~A~G~--~p~~ 266 (455)
T 2yqu_A 214 AERVFKKQGLTI--RTGVRVTAVVPEA--KGARVELEGG-------EV-LEADRVLVAVGR--RPYT 266 (455)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSCE--EECC
T ss_pred HHHHHHHCCCEE--EECCEEEEEEEeC--CEEEEEECCC-------eE-EEcCEEEECcCC--CcCC
Confidence 888888888655 9999999998764 4566665432 56 899999999994 4544
No 165
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.81 E-value=3.2e-09 Score=100.14 Aligned_cols=62 Identities=18% Similarity=0.168 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 78 VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 78 ~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
..+..+.++|.+.+++.|+.. +++ +|++++.+++...+.|++.++ .+ +.+|.||.|+|.++.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~--~~~-~v~~i~~~~~~~~~~v~~~~g-------~~-~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRH--VVD-DVQHVGQDERGWISGVHTKQH-------GE-ISGDLFVDCTGFRGL 231 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEE--EEC-CEEEEEECTTSCEEEEEESSS-------CE-EECSEEEECCGGGCC
T ss_pred EcHHHHHHHHHHHHHHCCCEE--EEC-eEeEEEEcCCCCEEEEEECCC-------CE-EEcCEEEECCCcchH
Confidence 567899999999999888654 888 899998754222355666543 46 899999999997654
No 166
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.81 E-value=1.1e-08 Score=102.20 Aligned_cols=131 Identities=15% Similarity=0.116 Sum_probs=83.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCC---CCccCCCC---------------------CCceE-----
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCY---ASIWKKYS---------------------YDRLR----- 55 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~~---Gg~w~~~~---------------------y~~~~----- 55 (325)
.++||+|||||++|+++|+.|+++|. +|+|+|+++.. |++|+... |..+.
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 35799999999999999999999998 99999998753 33443210 00000
Q ss_pred ---------eecCC--------------------Ccc-------CCCCCCCCCC-------CCCCCCHHHHHHHHHHHHH
Q 020533 56 ---------LHLAK--------------------QFC-------QLPHLPFPSS-------YPMFVSRAQFIEHLDHYVS 92 (325)
Q Consensus 56 ---------~~~~~--------------------~~~-------~~~~~~~~~~-------~~~~~~~~~~~~yl~~~a~ 92 (325)
+.... ... .++....... .........+...|.+.++
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 00000 000 0000000000 0112355688888888898
Q ss_pred HcCCCceeeeCeEEEEEEEcCCCCc-EEEEEeecCCCCceeEEEEEeCeEEEcccCCC
Q 020533 93 HFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGETT 149 (325)
Q Consensus 93 ~~~l~~~i~~~~~V~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~ 149 (325)
+.|+. ++++++|++++.++ +. +.|.+.+ .+ +.||.||+|+|.++
T Consensus 163 ~~Gv~--i~~~t~V~~i~~~~--~~v~~V~t~~--------G~-i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 163 SAGVT--YRGSTTVTGIEQSG--GRVTGVQTAD--------GV-IPADIVVSCAGFWG 207 (830)
T ss_dssp HTTCE--EECSCCEEEEEEET--TEEEEEEETT--------EE-EECSEEEECCGGGH
T ss_pred HcCCE--EECCceEEEEEEeC--CEEEEEEECC--------cE-EECCEEEECCccch
Confidence 88855 48899999998764 44 3465543 46 89999999999765
No 167
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.81 E-value=1.4e-08 Score=96.36 Aligned_cols=38 Identities=21% Similarity=0.415 Sum_probs=34.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg 44 (325)
..+||+|||||++||++|..|++ |.+|+|+||.+..+|
T Consensus 7 ~~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 7 HSCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp EECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 35899999999999999999999 999999999987654
No 168
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.77 E-value=7.4e-08 Score=92.51 Aligned_cols=140 Identities=15% Similarity=0.151 Sum_probs=81.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCC--------ccCCCC-CCceE------eecCCCc-------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYAS--------IWKKYS-YDRLR------LHLAKQF------- 62 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~~~Gg--------~w~~~~-y~~~~------~~~~~~~------- 62 (325)
.+||+|||||++||++|..|++.| .+|+|+|+.+..++ ...... .+... +......
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~v~ 84 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDVVD 84 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 479999999999999999999999 99999999865432 111000 00000 0000000
Q ss_pred ---------------cCCCCCCCC------CCCCC-------C---CCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEE
Q 020533 63 ---------------CQLPHLPFP------SSYPM-------F---VSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASY 111 (325)
Q Consensus 63 ---------------~~~~~~~~~------~~~~~-------~---~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~ 111 (325)
...++...+ ..+.. + .....+...|.+.+.+.+ ...++++++|+++..
T Consensus 85 ~~~~~~~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~g-nv~i~~~~~v~~l~~ 163 (602)
T 1kf6_A 85 YFVHHCPTEMTQLELWGCPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFP-QIQRFDEHFVLDILV 163 (602)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCT-TEEEEETEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCC-CcEEEeCCEEEEEEE
Confidence 000100000 00000 0 124577888888877766 134599999999987
Q ss_pred cCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCC
Q 020533 112 DEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNP 151 (325)
Q Consensus 112 ~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p 151 (325)
++ ...+.|...+...+ +... +.++.||+|||.++..
T Consensus 164 ~~-g~v~Gv~~~~~~~G--~~~~-i~A~~VVlAtGg~s~~ 199 (602)
T 1kf6_A 164 DD-GHVRGLVAMNMMEG--TLVQ-IRANAVVMATGGAGRV 199 (602)
T ss_dssp ET-TEEEEEEEEETTTT--EEEE-EECSCEEECCCCCGGG
T ss_pred eC-CEEEEEEEEEcCCC--cEEE-EEcCeEEECCCCCccc
Confidence 64 22233444332222 3347 8999999999987643
No 169
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.75 E-value=5.9e-08 Score=95.52 Aligned_cols=39 Identities=33% Similarity=0.457 Sum_probs=36.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS 44 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg 44 (325)
..+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 357999999999999999999999999999999998888
No 170
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.72 E-value=1.8e-09 Score=98.11 Aligned_cols=119 Identities=17% Similarity=0.137 Sum_probs=74.5
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCC---CCc--cCCCCCC----------c-e----EeecCCCccCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCY---ASI--WKKYSYD----------R-L----RLHLAKQFCQL 65 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~---Gg~--w~~~~y~----------~-~----~~~~~~~~~~~ 65 (325)
+||+|||||++|+++|..|++. |++|+|+|+++.+ |.. +..+... . + .......+..
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 79 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVH- 79 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEE-
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEe-
Confidence 4899999999999999999999 9999999998766 221 0001000 0 0 0000000000
Q ss_pred CCCCCCCC-CC--CCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEE
Q 020533 66 PHLPFPSS-YP--MFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLV 142 (325)
Q Consensus 66 ~~~~~~~~-~~--~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vI 142 (325)
........ .. ....+.++.++|.+.+.+.++. ++++++|++++.. .. +.+|.||
T Consensus 80 ~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~--i~~~~~v~~i~~~--------------------~~-~~ad~vV 136 (381)
T 3c4a_A 80 HNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIA--IRFESPLLEHGEL--------------------PL-ADYDLVV 136 (381)
T ss_dssp SSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCE--EETTCCCCSGGGC--------------------CG-GGCSEEE
T ss_pred CCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCE--EEeCCEeccchhc--------------------cc-ccCCEEE
Confidence 00000000 00 1257889999999999988754 5999998776421 12 5689999
Q ss_pred EcccCCCC
Q 020533 143 VASGETTN 150 (325)
Q Consensus 143 iAtG~~~~ 150 (325)
.|+|.+|.
T Consensus 137 ~AdG~~S~ 144 (381)
T 3c4a_A 137 LANGVNHK 144 (381)
T ss_dssp ECCGGGGG
T ss_pred ECCCCCch
Confidence 99998765
No 171
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.72 E-value=9e-08 Score=92.01 Aligned_cols=138 Identities=17% Similarity=0.146 Sum_probs=81.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCC--------ccCCCC---CCceEee------cCCC--------
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYAS--------IWKKYS---YDRLRLH------LAKQ-------- 61 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg--------~w~~~~---y~~~~~~------~~~~-------- 61 (325)
.+||+|||||++||++|..|++.|.+|+|+||....++ .+.... .+..... ....
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~~g~s~~a~GGi~a~~~~~~~ds~~~~~~dtl~~g~~l~d~~~v~ 97 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPTRSHTVAAQGGINAALGNMEDDNWRWHFYDTVKGSDWLGDQDAIH 97 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGGGSGGGGCCSCEECCCCSSSCCCHHHHHHHHHHHTTTCSCHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCCCCCchhhCCCcEecCCCCCCCCHHHHHHHHHHhcCCCCCHHHHH
Confidence 47999999999999999999999999999999874432 221100 0000000 0000
Q ss_pred ------------c--cCCCCCC----------CCCCC----------CC-C---CCHHHHHHHHHHHHHHcCCCceeeeC
Q 020533 62 ------------F--CQLPHLP----------FPSSY----------PM-F---VSRAQFIEHLDHYVSHFNIGPSIRYQ 103 (325)
Q Consensus 62 ------------~--~~~~~~~----------~~~~~----------~~-~---~~~~~~~~yl~~~a~~~~l~~~i~~~ 103 (325)
+ ...++.. ++... +. + .....+...|.+.+.+.++. ++++
T Consensus 98 ~l~~~s~~~i~~L~~~Gv~f~~~~~g~~~~~~~gg~s~~~g~~~~~~R~~~~~d~tG~~l~~~L~~~~~~~gv~--i~~~ 175 (621)
T 2h88_A 98 YMTEQAPAAVIELENYGMPFSRTEEGKIYQRAFGGQSLQFGKGGQAHRCCCVADRTGHSLLHTLYGRSLRYDTS--YFVE 175 (621)
T ss_dssp HHHHHHHHHHHHHHHTTCCCCBCTTSSBCEECCTTCBSTTTTSCBCCCEECSTTCHHHHHHHHHHHHHTTSCCE--EEET
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCceeccccCcccccccCCCcceeEEEecCCCHHHHHHHHHHHHHhCCCE--EEEc
Confidence 0 0001000 00000 00 1 13457788888888777754 5999
Q ss_pred eEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCC
Q 020533 104 RSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 104 ~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
+.|+++..++ ....-|...+..++ +... +.++.||+|||.++.
T Consensus 176 ~~v~~Li~~~-g~v~Gv~~~~~~~G--~~~~-i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 176 YFALDLLMEN-GECRGVIALCIEDG--TIHR-FRAKNTVIATGGYGR 218 (621)
T ss_dssp EEEEEEEEET-TEEEEEEEEETTTC--CEEE-EEEEEEEECCCCCGG
T ss_pred eEEEEEEEEC-CEEEEEEEEEcCCC--cEEE-EEcCeEEECCCcccc
Confidence 9999997653 22234555432222 3357 899999999998764
No 172
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.71 E-value=2.1e-07 Score=90.06 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=34.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~ 42 (325)
..+||+|||||++||++|..|++.|.+|+|+||.+..
T Consensus 4 ~~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 4 QYCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp EECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred ccccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 3579999999999999999999999999999998754
No 173
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.70 E-value=1.1e-07 Score=86.22 Aligned_cols=98 Identities=14% Similarity=0.062 Sum_probs=77.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+... ....++.++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~--------------------------------~~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG--------------------------------LLHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc--------------------------------ccCHHHHHH
Confidence 568999999999999999999999999999998753210 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
+.+.+++.++.. +++++|.+++.++ +.+.|++.++ .+ +.+|.||+|+|..
T Consensus 193 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~g-------~~-i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 193 VQAGLEGLGVRF--HLGPVLASLKKAG--EGLEAHLSDG-------EV-IPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHTTTCEE--EESCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSCEE
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEecC--CEEEEEECCC-------CE-EECCEEEECcCCC
Confidence 888888888654 9999999998754 4567776543 56 8999999999943
No 174
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.70 E-value=1.1e-07 Score=91.94 Aligned_cols=36 Identities=17% Similarity=0.269 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhc------CCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ------SIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~------g~~v~v~e~~~~~ 42 (325)
.+||+|||||++||++|..|++. |.+|+|+||....
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~~ 63 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASLE 63 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCTT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCCC
Confidence 58999999999999999999997 9999999997643
No 175
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.69 E-value=1.3e-07 Score=88.00 Aligned_cols=106 Identities=16% Similarity=0.126 Sum_probs=80.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+.. ....++.++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 215 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP---------------------------------QGDPETAAL 215 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875321 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
+.+.+++.++.. +++++|.+++.++ +.+.|++.+..++ +..+ +.+|.||+|+| ..|+.+
T Consensus 216 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vv~a~G--~~p~~~ 274 (464)
T 2eq6_A 216 LRRALEKEGIRV--RTKTKAVGYEKKK--DGLHVRLEPAEGG--EGEE-VVVDKVLVAVG--RKPRTE 274 (464)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTCC--SCEE-EEESEEEECSC--EEESCT
T ss_pred HHHHHHhcCCEE--EcCCEEEEEEEeC--CEEEEEEeecCCC--ceeE-EEcCEEEECCC--cccCCC
Confidence 888888888655 9999999998754 4566776521101 1147 89999999999 455544
No 176
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.69 E-value=1.8e-07 Score=87.48 Aligned_cols=107 Identities=15% Similarity=0.251 Sum_probs=80.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+... ...++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------------------------------MDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------------------------------SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------------------------------cCHHHHHH
Confidence 468999999999999999999999999999999864311 11467888
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++..+.+.+.+.+...+ +..+ +.+|.||+|+| ..|+.
T Consensus 230 l~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G--~~p~~ 289 (478)
T 1v59_A 230 TQKFLKKQGLDF--KLSTKVISAKRNDDKNVVEIVVEDTKTN--KQEN-LEAEVLLVAVG--RRPYI 289 (478)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEETTTTEEEEEEEETTTT--EEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEecCCCeEEEEEEEcCCC--CceE-EECCEEEECCC--CCcCC
Confidence 888888888665 9999999998631224566776531111 1257 89999999999 44544
No 177
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.68 E-value=2.5e-08 Score=91.63 Aligned_cols=48 Identities=27% Similarity=0.408 Sum_probs=41.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCCccCCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKKY 49 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~~~Gg~w~~~ 49 (325)
|+. ..++||+|||||++||++|..|++.| .+|+|+|+++++||.+...
T Consensus 1 M~~-~~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t~ 49 (424)
T 2b9w_A 1 MSI-SKDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHSP 49 (424)
T ss_dssp -CC-CTTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCCC
T ss_pred CCC-CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCccccc
Confidence 542 34579999999999999999999999 8999999999999976553
No 178
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.68 E-value=1.6e-08 Score=94.02 Aligned_cols=48 Identities=15% Similarity=0.275 Sum_probs=41.6
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
|+.+...+||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 5 ~~~~~~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 5 QETIDTDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp --CCCCBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred hhhccccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 344456689999999999999999999999999999999999997654
No 179
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.67 E-value=1.5e-08 Score=95.30 Aligned_cols=40 Identities=30% Similarity=0.365 Sum_probs=31.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
++|+|||||++||+||..|+++|++|+|+|+++.+||...
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 5899999999999999999999999999999999999544
No 180
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.66 E-value=1.9e-07 Score=86.72 Aligned_cols=103 Identities=16% Similarity=0.146 Sum_probs=78.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS---------------------------------GFEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875420 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ +...+++.... +..+ +.+|.||+|+| ..|+.
T Consensus 217 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g----~~~~-~~~D~vv~a~G--~~p~~ 272 (455)
T 1ebd_A 217 IKKRLKKKGVEV--VTNALAKGAEERE--DGVTVTYEANG----ETKT-IDADYVLVTVG--RRPNT 272 (455)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEET--TEEEEEEEETT----EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEEeCC----ceeE-EEcCEEEECcC--CCccc
Confidence 888888888655 9999999998754 44666654211 1167 89999999999 44543
No 181
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.66 E-value=4e-08 Score=91.02 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~ 40 (325)
.+||+|||||++|+++|..|+++| .+|+|+|++.
T Consensus 23 ~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~ 57 (448)
T 3axb_A 23 RFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGH 57 (448)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSS
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCC
Confidence 479999999999999999999999 9999999933
No 182
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.66 E-value=1.9e-08 Score=91.92 Aligned_cols=51 Identities=24% Similarity=0.267 Sum_probs=43.2
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCCccCCCCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKKYSY 51 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~~~Gg~w~~~~y 51 (325)
|.++...+||+|||||++||++|..|++. |.+|+|+|+++.+||.+.....
T Consensus 1 m~~m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~~~~ 52 (399)
T 1v0j_A 1 MQPMTARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYSEAE 52 (399)
T ss_dssp ---CCCSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCEEEC
T ss_pred CCcccccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeeccc
Confidence 55555578999999999999999999999 9999999999999998876433
No 183
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.66 E-value=2.6e-07 Score=85.92 Aligned_cols=172 Identities=14% Similarity=0.122 Sum_probs=89.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCCCCCccCCCCCCceEee--cCC---CccCCCCC--------CCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENCYASIWKKYSYDRLRLH--LAK---QFCQLPHL--------PFP 71 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~~Gg~w~~~~y~~~~~~--~~~---~~~~~~~~--------~~~ 71 (325)
.++|+|||+|.+|+.+|..|.+. +.+|+++++.+.+- .......... .+. .+..++.. ...
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~----p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~ 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALK----PADDSPFVNEVFAPKFTDLIYSREHAERERLLREYHN 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCC----BCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHHTGG
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCc----CccCCccchhccChhHHHHHhcCCHHHHHHHHHHhhc
Confidence 56899999999999999999999 88999999987531 0000000000 000 00000000 000
Q ss_pred CCCCCCCCHH---HHHHHH-HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 72 SSYPMFVSRA---QFIEHL-DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 72 ~~~~~~~~~~---~~~~yl-~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
..+. -.... ++.+.+ .+.... ....+++++++|++++.++ +.|.|++.+..++ +..+ +.+|.||+|||.
T Consensus 303 ~~~~-~~~~~~~~~~~~~l~~~~~~~-~~~v~i~~~~~v~~v~~~~--~~~~v~~~~~~~g--~~~~-~~~D~Vv~AtG~ 375 (463)
T 3s5w_A 303 TNYS-VVDTDLIERIYGVFYRQKVSG-IPRHAFRCMTTVERATATA--QGIELALRDAGSG--ELSV-ETYDAVILATGY 375 (463)
T ss_dssp GTSS-CBCHHHHHHHHHHHHHHHHHC-CCCSEEETTEEEEEEEEET--TEEEEEEEETTTC--CEEE-EEESEEEECCCE
T ss_pred cCCC-cCCHHHHHHHHHHHHHHHhcC-CCCeEEEeCCEEEEEEecC--CEEEEEEEEcCCC--CeEE-EECCEEEEeeCC
Confidence 0000 00000 111111 111111 1235569999999998765 6799998865333 3367 899999999995
Q ss_pred CCCCCCCCCCCccccccCCCCCccEEecCCCCCCC-CCCCCeEEEECcC
Q 020533 148 TTNPFTPDIRGLCSFCSSATGTGEVIHSTQYKNGK-PYGGKNVLVVGSG 195 (325)
Q Consensus 148 ~~~p~~p~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~v~VvG~G 195 (325)
...+..+.+.++... .|.+.....+.-.. .....+|-++|..
T Consensus 376 ~p~~~~~~l~~l~~~------~g~i~v~~~~~~~~~~~~~~~Ifa~G~~ 418 (463)
T 3s5w_A 376 ERQLHRQLLEPLAEY------LGDHEIGRDYRLQTDERCKVAIYAQGFS 418 (463)
T ss_dssp ECCC-CTTTGGGGGG------BC--CCCTTSBCCBCTTBCSEEEESSCC
T ss_pred CCCCccchhHHHHHH------hCCcccCcccccccCCCCCCeEEEcCCC
Confidence 333223444554433 25455544443221 1124568888863
No 184
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.66 E-value=6.8e-08 Score=89.52 Aligned_cols=102 Identities=21% Similarity=0.288 Sum_probs=77.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..++++|||+|++|+.+|..|++.|.+|+++|+.+.+... ....++.+
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 195 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV--------------------------------YLDKEFTD 195 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TCCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc--------------------------------cCCHHHHH
Confidence 4579999999999999999999999999999998754210 01246788
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
++.+.+++.++. ++++++|.+++.++ ..+.+.+.+ .+ +.+|.||+|+| ..|+.+
T Consensus 196 ~l~~~l~~~gv~--i~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~d~vi~a~G--~~p~~~ 249 (447)
T 1nhp_A 196 VLTEEMEANNIT--IATGETVERYEGDG--RVQKVVTDK--------NA-YDADLVVVAVG--VRPNTA 249 (447)
T ss_dssp HHHHHHHTTTEE--EEESCCEEEEECSS--BCCEEEESS--------CE-EECSEEEECSC--EEESCG
T ss_pred HHHHHHHhCCCE--EEcCCEEEEEEccC--cEEEEEECC--------CE-EECCEEEECcC--CCCChH
Confidence 888888888855 49999999987542 333455432 46 89999999999 445443
No 185
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.62 E-value=1.7e-07 Score=86.93 Aligned_cols=101 Identities=13% Similarity=0.059 Sum_probs=78.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. . -..++.++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-------------------------------S--FDPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-------------------------------h--hhHHHHHH
Confidence 46899999999999999999999999999999875320 0 11357788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ ++.+.|++.++ .+ +.+|.||+|+| ..|+.
T Consensus 214 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-------~~-i~~D~vv~a~G--~~p~~ 267 (450)
T 1ges_A 214 LVEVMNAEGPQL--HTNAIPKAVVKNT-DGSLTLELEDG-------RS-ETVDCLIWAIG--REPAN 267 (450)
T ss_dssp HHHHHHHHSCEE--ECSCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC-CcEEEEEECCC-------cE-EEcCEEEECCC--CCcCC
Confidence 888888888655 9999999998653 23467776553 46 89999999999 45554
No 186
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.61 E-value=4.4e-07 Score=87.83 Aligned_cols=35 Identities=17% Similarity=0.376 Sum_probs=32.5
Q ss_pred CCeEEEECCChHHHHHHHHHH---h-cCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLS---L-QSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~---~-~g~~v~v~e~~~~ 41 (325)
.+||+|||||++||++|..|+ + .|.+|+|+||.+.
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 479999999999999999999 6 8999999999874
No 187
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.60 E-value=5.7e-07 Score=84.31 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=81.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG---------------------------------GMDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS---------------------------------SSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc---------------------------------cCCHHHHHH
Confidence 46899999999999999999999999999999875421 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ +...+.+.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 245 l~~~l~~~gV~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~Vi~a~G--~~p~~ 302 (491)
T 3urh_A 245 LQRMLTKQGIDF--KLGAKVTGAVKSG--DGAKVTFEPVKGG--EATT-LDAEVVLIATG--RKPST 302 (491)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEEET--TEEEEEEEETTSC--CCEE-EEESEEEECCC--CEECC
T ss_pred HHHHHHhCCCEE--EECCeEEEEEEeC--CEEEEEEEecCCC--ceEE-EEcCEEEEeeC--CccCC
Confidence 888888888665 9999999998765 5667777653211 2257 89999999999 44544
No 188
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.60 E-value=2.1e-07 Score=86.59 Aligned_cols=100 Identities=17% Similarity=0.098 Sum_probs=77.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. . -..++.++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 212 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------------------------------Q--FDPLLSAT 212 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------------------------------c--cCHHHHHH
Confidence 46899999999999999999999999999999875320 0 11356778
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeE-EEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIE-EYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~-~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ +.+.|++.++ . + +.+|.||+|+| ..|+.
T Consensus 213 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~G-------~~~-i~~D~vv~a~G--~~p~~ 266 (463)
T 2r9z_A 213 LAENMHAQGIET--HLEFAVAALERDA--QGTTLVAQDG-------TRL-EGFDSVIWAVG--RAPNT 266 (463)
T ss_dssp HHHHHHHTTCEE--ESSCCEEEEEEET--TEEEEEETTC-------CEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CeEEEEEeCC-------cEE-EEcCEEEECCC--CCcCC
Confidence 888888888655 9999999998754 3466776543 3 7 89999999999 44554
No 189
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.60 E-value=9.2e-08 Score=89.92 Aligned_cols=53 Identities=28% Similarity=0.345 Sum_probs=45.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLA 59 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~ 59 (325)
.+||+|||||++||++|..|.+.|++|+|+|+++.+||.+.....++..++..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~~~g 65 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRSVSQDGLIWDEG 65 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCEEEETTEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceeeeccCCeEEecC
Confidence 47999999999999999999999999999999999999877655555555443
No 190
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.59 E-value=1.6e-07 Score=87.31 Aligned_cols=101 Identities=15% Similarity=0.147 Sum_probs=75.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|++.|.+|+++|+.+.+... ...++.++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILPT---------------------------------YDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSTT---------------------------------SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCccccc---------------------------------cCHHHHHH
Confidence 468999999999999999999999999999998864210 12367778
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
+.+.+++.++.. +++++|.+++. + + ..++..++ +..+ +.+|.||+|+| ..|+.+
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~-~--~-v~v~~~~G-----~~~~-i~~D~vv~a~G--~~p~~~ 271 (458)
T 1lvl_A 218 VAESLKKLGIAL--HLGHSVEGYEN-G--C-LLANDGKG-----GQLR-LEADRVLVAVG--RRPRTK 271 (458)
T ss_dssp HHHHHHHHTCEE--ETTCEEEEEET-T--E-EEEECSSS-----CCCE-ECCSCEEECCC--EEECCS
T ss_pred HHHHHHHCCCEE--EECCEEEEEEe-C--C-EEEEECCC-----ceEE-EECCEEEECcC--CCcCCC
Confidence 888888888665 99999999875 2 2 44442122 1146 89999999999 455544
No 191
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.57 E-value=7.9e-07 Score=82.94 Aligned_cols=107 Identities=14% Similarity=0.188 Sum_probs=79.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++|+.+.+... ....++.++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 225 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV--------------------------------GIDMEISKN 225 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS--------------------------------SCCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc--------------------------------ccCHHHHHH
Confidence 468999999999999999999999999999998753210 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ ++.+.+++.+...+ +..+ +.+|.||+|+| ..|+.
T Consensus 226 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~--~~~~-i~~D~vv~a~G--~~p~~ 284 (474)
T 1zmd_A 226 FQRILQKQGFKF--KLNTKVTGATKKS-DGKIDVSIEAASGG--KAEV-ITCDVLLVCIG--RRPFT 284 (474)
T ss_dssp HHHHHHHTTCEE--ECSEEEEEEEECT-TSCEEEEEEETTSC--CCEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHCCCEE--EeCceEEEEEEcC-CceEEEEEEecCCC--CceE-EEcCEEEECcC--CCcCC
Confidence 888888888655 9999999998754 22266665421110 1167 89999999999 44543
No 192
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.55 E-value=5.1e-07 Score=84.13 Aligned_cols=101 Identities=11% Similarity=0.143 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~---------------------------------~~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP---------------------------------TMDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc---------------------------------cccHHHHHH
Confidence 46899999999999999999999999999999875320 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ +...+++.+...+ +..+ +.+|.||+|+|.
T Consensus 224 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G~ 277 (470)
T 1dxl_A 224 FQRSLEKQGMKF--KLKTKVVGVDTSG--DGVKLTVEPSAGG--EQTI-IEADVVLVSAGR 277 (470)
T ss_dssp HHHHHHHSSCCE--ECSEEEEEEECSS--SSEEEEEEESSSC--CCEE-EEESEEECCCCE
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEEcC--CeEEEEEEecCCC--cceE-EECCEEEECCCC
Confidence 888888888765 9999999997654 4466666531111 1157 899999999994
No 193
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.54 E-value=9.8e-08 Score=89.35 Aligned_cols=50 Identities=16% Similarity=0.311 Sum_probs=43.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCCccCC-CCCCceE
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKK-YSYDRLR 55 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~~~Gg~w~~-~~y~~~~ 55 (325)
..+||+|||||++||++|..|.+.| .+|+|+|+++.+||.|.. ..+.+..
T Consensus 8 ~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~ 59 (484)
T 4dsg_A 8 LTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFT 59 (484)
T ss_dssp CSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcE
Confidence 4589999999999999999999998 799999999999998876 2344443
No 194
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.54 E-value=4.4e-07 Score=84.52 Aligned_cols=94 Identities=13% Similarity=0.146 Sum_probs=76.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. + ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l---------------------------~-------~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF---------------------------R-------EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT---------------------------T-------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC---------------------------C-------CCHHHHHH
Confidence 4689999999999999999999999999999987531 0 12467888
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ +.+.|.+.+ .+ +.+|.||+|+|.
T Consensus 222 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~~~v~~~~--------~~-i~aD~Vv~a~G~ 269 (467)
T 1zk7_A 222 VTAAFRAEGIEV--LEHTQASQVAHMD--GEFVLTTTH--------GE-LRADKLLVATGR 269 (467)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEEET--TEEEEEETT--------EE-EEESEEEECSCE
T ss_pred HHHHHHhCCCEE--EcCCEEEEEEEeC--CEEEEEECC--------cE-EEcCEEEECCCC
Confidence 888888888655 9999999998754 556666542 57 899999999994
No 195
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.53 E-value=5.6e-07 Score=83.71 Aligned_cols=102 Identities=17% Similarity=0.155 Sum_probs=78.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP---------------------------------NEDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875320 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEe-ecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKAS-NLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~-~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. +++++|.+++.++ +...+.+. ++ +..+ +.+|.||+|+| ..|+.
T Consensus 218 l~~~l~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~g-----~~~~-~~~D~vv~a~G--~~p~~ 273 (464)
T 2a8x_A 218 IEKQFKKLGVTI--LTATKVESIADGG--SQVTVTVTKDG-----VAQE-LKAEKVLQAIG--FAPNV 273 (464)
T ss_dssp HHHHHHHHTCEE--ECSCEEEEEEECS--SCEEEEEESSS-----CEEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHcCCEE--EeCcEEEEEEEcC--CeEEEEEEcCC-----ceEE-EEcCEEEECCC--CCccC
Confidence 888888888655 9999999998654 34556654 22 2257 89999999999 44543
No 196
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.52 E-value=1e-07 Score=86.58 Aligned_cols=50 Identities=20% Similarity=0.220 Sum_probs=43.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCC-CCceE
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYS-YDRLR 55 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~-y~~~~ 55 (325)
..+||+|||||++||++|..|++.|.+|+|+|+++.+||.|.... ..+..
T Consensus 28 ~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~~~~~~G~~ 78 (397)
T 3hdq_A 28 KGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYDCYDDAGVL 78 (397)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCCEECTTSCE
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccceeeccCCce
Confidence 357999999999999999999999999999999999999887542 34443
No 197
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.52 E-value=7.6e-07 Score=82.95 Aligned_cols=104 Identities=14% Similarity=0.167 Sum_probs=78.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ...++.++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~~~~ 220 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAPT---------------------------------LDEDVTNA 220 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT---------------------------------SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCccccc---------------------------------CCHHHHHH
Confidence 468999999999999999999999999999998753210 12467788
Q ss_pred HHHHH-HHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYV-SHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a-~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+ ++.++.. +++++|.+++.++ +.+.+.+...++ +..+ +.+|.||+|+|. .|+.
T Consensus 221 l~~~l~~~~gv~i--~~~~~v~~i~~~~--~~~~v~~~~~~g---~~~~-i~~D~vv~a~G~--~p~~ 278 (468)
T 2qae_A 221 LVGALAKNEKMKF--MTSTKVVGGTNNG--DSVSLEVEGKNG---KRET-VTCEALLVSVGR--RPFT 278 (468)
T ss_dssp HHHHHHHHTCCEE--ECSCEEEEEEECS--SSEEEEEECC------EEE-EEESEEEECSCE--EECC
T ss_pred HHHHHhhcCCcEE--EeCCEEEEEEEcC--CeEEEEEEcCCC---ceEE-EECCEEEECCCc--ccCC
Confidence 88888 8888655 9999999998754 446676652111 2256 899999999994 4443
No 198
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.52 E-value=4.9e-08 Score=92.18 Aligned_cols=42 Identities=26% Similarity=0.415 Sum_probs=38.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCCCCCccCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILERENCYASIWKK 48 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~~~Gg~w~~ 48 (325)
.+||+|||||++||+||..|.+.| ++|+|+|+++++||.+..
T Consensus 8 ~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 8 KKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp EEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 479999999999999999999999 999999999999996543
No 199
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.52 E-value=1.2e-06 Score=82.16 Aligned_cols=104 Identities=15% Similarity=0.124 Sum_probs=77.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ...++.+.
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~~~~ 220 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVANL---------------------------------QDEEMKRY 220 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTTC---------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCccccc---------------------------------CCHHHHHH
Confidence 468999999999999999999999999999998864210 12366777
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
+.+..++. ..++++++|.+++.++ +...+++.+.++ +..+ +.+|.||+|+| ..|+..
T Consensus 221 l~~~l~~~---V~i~~~~~v~~i~~~~--~~v~v~~~~~~G---~~~~-i~~D~Vi~a~G--~~p~~~ 277 (492)
T 3ic9_A 221 AEKTFNEE---FYFDAKARVISTIEKE--DAVEVIYFDKSG---QKTT-ESFQYVLAATG--RKANVD 277 (492)
T ss_dssp HHHHHHTT---SEEETTCEEEEEEECS--SSEEEEEECTTC---CEEE-EEESEEEECSC--CEESCS
T ss_pred HHHHHhhC---cEEEECCEEEEEEEcC--CEEEEEEEeCCC---ceEE-EECCEEEEeeC--CccCCC
Confidence 77777654 4458999999998754 456666653221 2257 89999999999 455443
No 200
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.51 E-value=1.7e-07 Score=88.58 Aligned_cols=42 Identities=29% Similarity=0.385 Sum_probs=38.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
.+||+|||||++||++|..|++.|++|+|+|+++++||....
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~t 45 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTYT 45 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCceee
Confidence 469999999999999999999999999999999999996543
No 201
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.51 E-value=8.1e-07 Score=81.42 Aligned_cols=98 Identities=17% Similarity=0.204 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+-. -....++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~--------------------------------~~~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA--------------------------------RVAGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT--------------------------------TTSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh--------------------------------hhcCHHHHHH
Confidence 56899999999999999999999999999999875310 0112478888
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.|+.. +++++|.+++.++ .....|++.++ .+ +.||.||+|+|.
T Consensus 200 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~v~l~dG-------~~-i~aD~Vv~a~G~ 249 (415)
T 3lxd_A 200 YQAEHRAHGVDL--RTGAAMDCIEGDG-TKVTGVRMQDG-------SV-IPADIVIVGIGI 249 (415)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEESS-SBEEEEEESSS-------CE-EECSEEEECSCC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECCCC
Confidence 899899888665 9999999997653 12235666654 56 899999999994
No 202
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.50 E-value=7.5e-07 Score=84.24 Aligned_cols=101 Identities=12% Similarity=-0.003 Sum_probs=79.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
.+.+++|||||+.|+.+|..+++.|.+|+|+++...+. ...+++.+
T Consensus 222 lP~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~L~----------------------------------~~D~ei~~ 267 (542)
T 4b1b_A 222 DPGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIVLR----------------------------------GFDQQCAV 267 (542)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCSST----------------------------------TSCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHhcCCeEEEeccccccc----------------------------------ccchhHHH
Confidence 34689999999999999999999999999998754321 01247888
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
.+.+..++.++.. +.++.+.+++..+ +...|.+.+. .. +.+|.|++|+| ..|+..
T Consensus 268 ~l~~~l~~~gi~~--~~~~~v~~~~~~~--~~~~v~~~~~-------~~-~~~D~vLvAvG--R~Pnt~ 322 (542)
T 4b1b_A 268 KVKLYMEEQGVMF--KNGILPKKLTKMD--DKILVEFSDK-------TS-ELYDTVLYAIG--RKGDID 322 (542)
T ss_dssp HHHHHHHHTTCEE--EETCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECSC--EEESCG
T ss_pred HHHHHHHhhccee--ecceEEEEEEecC--CeEEEEEcCC-------Ce-EEEEEEEEccc--ccCCcc
Confidence 8888899888655 9999999998765 5666666553 45 78999999999 556543
No 203
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.50 E-value=8.1e-07 Score=81.26 Aligned_cols=93 Identities=22% Similarity=0.320 Sum_probs=74.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSR--------------------------------AAPATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------------------------ccCHHHHHH
Confidence 478999999999999999999999999999998753210 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++ + + .|++.++ .+ +.+|.||+|+|.
T Consensus 193 l~~~l~~~GV~i--~~~~~v~~i~-~---~--~v~~~~g-------~~-i~~D~vi~a~G~ 237 (408)
T 2gqw_A 193 VARYHAAQGVDL--RFERSVTGSV-D---G--VVLLDDG-------TR-IAADMVVVGIGV 237 (408)
T ss_dssp HHHHHHHTTCEE--EESCCEEEEE-T---T--EEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHcCcEE--EeCCEEEEEE-C---C--EEEECCC-------CE-EEcCEEEECcCC
Confidence 888888888665 9999999987 2 2 5666543 56 899999999994
No 204
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.50 E-value=3.5e-07 Score=85.50 Aligned_cols=96 Identities=18% Similarity=0.252 Sum_probs=74.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
...+|+|||+|++|+.+|..|.+.|.+|+++|+.+.+... ...++.+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~ 231 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTI---------------------------------YDGDMAE 231 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTSS---------------------------------SCHHHHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhhc---------------------------------CCHHHHH
Confidence 3578999999999999999999999999999998754210 1246778
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
++.+.+++.++.. +++++|.+++.++ +.+.+.+.+ .+ +.+|.||+|+|.
T Consensus 232 ~l~~~l~~~Gv~i--~~~~~v~~i~~~~--~v~~v~~~~--------~~-i~~D~vi~a~G~ 280 (480)
T 3cgb_A 232 YIYKEADKHHIEI--LTNENVKAFKGNE--RVEAVETDK--------GT-YKADLVLVSVGV 280 (480)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--BEEEEEETT--------EE-EECSEEEECSCE
T ss_pred HHHHHHHHcCcEE--EcCCEEEEEEcCC--cEEEEEECC--------CE-EEcCEEEECcCC
Confidence 8888888888655 8999999997642 333444432 56 899999999994
No 205
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.50 E-value=9.6e-07 Score=81.87 Aligned_cols=101 Identities=14% Similarity=0.128 Sum_probs=77.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+... .-..++.+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~d~~~~~~ 194 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPK--------------------------------YFDKEMVAE 194 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT--------------------------------TCCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCccccc--------------------------------cCCHHHHHH
Confidence 468999999999999999999999999999998753200 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
+.+.+++.++.. +++++|.+++..+ +.+.|.+.+ .+ +.+|.||+|+| ..|+..
T Consensus 195 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~--------g~-i~aD~Vv~A~G--~~p~~~ 247 (452)
T 3oc4_A 195 VQKSLEKQAVIF--HFEETVLGIEETA--NGIVLETSE--------QE-ISCDSGIFALN--LHPQLA 247 (452)
T ss_dssp HHHHHHTTTEEE--EETCCEEEEEECS--SCEEEEESS--------CE-EEESEEEECSC--CBCCCS
T ss_pred HHHHHHHcCCEE--EeCCEEEEEEccC--CeEEEEECC--------CE-EEeCEEEECcC--CCCChH
Confidence 888888888654 9999999998644 445566543 36 89999999999 445443
No 206
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.49 E-value=7.3e-07 Score=83.58 Aligned_cols=101 Identities=13% Similarity=0.081 Sum_probs=78.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~---g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
..+++|||+|+.|+.+|..|.+. |.+|+++++.+.+... -..++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~~---------------------------------~d~~~ 233 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILRG---------------------------------FDSEL 233 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSSTT---------------------------------SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCcccc---------------------------------cCHHH
Confidence 46899999999999999999999 9999999998853200 12367
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
.+++.+.+++.++.. +++++|.+++.++ ++.+.|++.++ .+ +.+|.||+|+| ..|+.
T Consensus 234 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 290 (490)
T 1fec_A 234 RKQLTEQLRANGINV--RTHENPAKVTKNA-DGTRHVVFESG-------AE-ADYDVVMLAIG--RVPRS 290 (490)
T ss_dssp HHHHHHHHHHTTEEE--EETCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CCEEEEEECCC-------cE-EEcCEEEEccC--CCcCc
Confidence 788888888888654 9999999998754 23467776543 46 89999999999 44544
No 207
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.49 E-value=1.3e-06 Score=82.06 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=78.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .-..++.++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 222 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR---------------------------------KFDESVINV 222 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc---------------------------------ccchhhHHH
Confidence 46899999999999999999999999999999875320 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. +++++|.+++.++ ++.+.|++.++ + .. +.+|.||+|+| ..|+.
T Consensus 223 l~~~l~~~gv~i--~~~~~v~~i~~~~-~~~~~v~~~~g-----~-~~-~~~D~vi~a~G--~~p~~ 277 (500)
T 1onf_A 223 LENDMKKNNINI--VTFADVVEIKKVS-DKNLSIHLSDG-----R-IY-EHFDHVIYCVG--RSPDT 277 (500)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEESS-TTCEEEEETTS-----C-EE-EEESEEEECCC--BCCTT
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC-CceEEEEECCC-----c-EE-EECCEEEECCC--CCcCC
Confidence 888888888665 9999999998653 23466776543 2 35 78999999999 44554
No 208
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.49 E-value=3.1e-07 Score=85.93 Aligned_cols=103 Identities=13% Similarity=0.058 Sum_probs=78.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+.. ....++.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ---------------------------------GADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875320 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEee-cCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN-LLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~-~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. +++++|.+++.++ +...|++.+ ...+ .+ +.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~gV~i--~~~~~v~~i~~~~--~~~~v~~~~~~~~g----~~-~~~D~vv~a~G--~~p~~ 288 (482)
T 1ojt_A 232 WQKQNEYRFDNI--MVNTKTVAVEPKE--DGVYVTFEGANAPK----EP-QRYDAVLVAAG--RAPNG 288 (482)
T ss_dssp HHHHHGGGEEEE--ECSCEEEEEEEET--TEEEEEEESSSCCS----SC-EEESCEEECCC--EEECG
T ss_pred HHHHHHhcCCEE--EECCEEEEEEEcC--CeEEEEEeccCCCc----eE-EEcCEEEECcC--CCcCC
Confidence 888888887554 9999999998754 446676664 1111 45 78999999999 44543
No 209
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.48 E-value=1.1e-06 Score=81.95 Aligned_cols=103 Identities=17% Similarity=0.166 Sum_probs=79.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP---------------------------------AVDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875320 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++.++ +...+.+.++++ ..+ +.+|.||+|+| ..|+.
T Consensus 227 l~~~l~~~Gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~g----~~~-~~~D~vi~a~G--~~p~~ 282 (476)
T 3lad_A 227 AQKILTKQGLKI--LLGARVTGTEVKN--KQVTVKFVDAEG----EKS-QAFDKLIVAVG--RRPVT 282 (476)
T ss_dssp HHHHHHHTTEEE--EETCEEEEEEECS--SCEEEEEESSSE----EEE-EEESEEEECSC--EEECC
T ss_pred HHHHHHhCCCEE--EECCEEEEEEEcC--CEEEEEEEeCCC----cEE-EECCEEEEeeC--CcccC
Confidence 888888888654 9999999998754 556677765321 156 89999999999 44543
No 210
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.48 E-value=1.1e-06 Score=81.06 Aligned_cols=99 Identities=13% Similarity=0.175 Sum_probs=75.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLER--------------------------------VTAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccc--------------------------------hhhHHHHHH
Confidence 468999999999999999999999999999998753100 012367778
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEc-CCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYD-EATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~-~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.|+.. +++++|.+++.+ ++...+.|++.++ .+ +.+|.||+|+|.
T Consensus 197 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~v~~v~~~~G-------~~-i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 197 YEHLHREAGVDI--RTGTQVCGFEMSTDQQKVTAVLCEDG-------TR-LPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECTTTCCEEEEEETTS-------CE-EECSEEEECCCE
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEeccCCCcEEEEEeCCC-------CE-EEcCEEEECCCC
Confidence 888888888665 999999999762 1123335666543 56 899999999994
No 211
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.48 E-value=3.4e-07 Score=83.80 Aligned_cols=97 Identities=16% Similarity=0.184 Sum_probs=76.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVR--------------------------------VLGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHH--------------------------------HHCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999998753200 011367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ ....|++.++ .+ +.||.||+|+|.
T Consensus 191 l~~~l~~~GV~i--~~~~~v~~i~~~~--~~~~v~~~dg-------~~-i~aD~Vv~a~G~ 239 (410)
T 3ef6_A 191 LRGLLTELGVQV--ELGTGVVGFSGEG--QLEQVMASDG-------RS-FVADSALICVGA 239 (410)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEECSS--SCCEEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHCCCEE--EeCCEEEEEeccC--cEEEEEECCC-------CE-EEcCEEEEeeCC
Confidence 888888888665 8999999987643 4456777654 56 899999999994
No 212
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.48 E-value=9.3e-07 Score=83.53 Aligned_cols=97 Identities=13% Similarity=0.105 Sum_probs=76.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 87 (325)
.+++|||+|..|+.+|..|.+.|.+|+++++.+.+.. . ...++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-------------------------------I--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------------------------------C--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-------------------------------c--ccHHHHHHH
Confidence 6899999999999999999999999999999875320 0 124677888
Q ss_pred HHHHHHcCCCceeeeCeEEEEEEEcCCCCc---EEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 88 DHYVSHFNIGPSIRYQRSVESASYDEATNM---WNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 88 ~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~---~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
.+.+++.|+.. +++++|.+++.++ ++. +.|++.++ + .+ +.+|.||+|+|.
T Consensus 262 ~~~l~~~GV~i--~~~~~V~~i~~~~-~~~v~~~~v~~~~G-----~-~~-i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 262 LDRMKEQGMEI--ISGSNVTRIEEDA-NGRVQAVVAMTPNG-----E-MR-IETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHTTCEE--ESSCEEEEEEECT-TSBEEEEEEEETTE-----E-EE-EECSCEEECCCC
T ss_pred HHHHHhCCcEE--EECCEEEEEEEcC-CCceEEEEEEECCC-----c-EE-EEcCEEEECcCC
Confidence 88888888655 9999999998653 232 56666542 1 27 999999999994
No 213
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.47 E-value=9.4e-07 Score=82.91 Aligned_cols=101 Identities=15% Similarity=0.078 Sum_probs=78.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhc---CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ---SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQF 83 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~---g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (325)
..+++|||+|..|+.+|..|.+. |.+|+++++.+.+.. . -..++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~ 237 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------------------------------G--FDETI 237 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------------------------------T--SCHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------------------------------c--cCHHH
Confidence 46899999999999999999999 999999999875320 0 12367
Q ss_pred HHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 84 IEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 84 ~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
.+++.+.+++.++.. +++++|.+++.++ ++...|++.++ .+ +.+|.||+|+| ..|+.
T Consensus 238 ~~~l~~~l~~~GV~i--~~~~~v~~i~~~~-~~~~~v~~~~G-------~~-i~~D~vv~a~G--~~p~~ 294 (495)
T 2wpf_A 238 REEVTKQLTANGIEI--MTNENPAKVSLNT-DGSKHVTFESG-------KT-LDVDVVMMAIG--RIPRT 294 (495)
T ss_dssp HHHHHHHHHHTTCEE--EESCCEEEEEECT-TSCEEEEETTS-------CE-EEESEEEECSC--EEECC
T ss_pred HHHHHHHHHhCCCEE--EeCCEEEEEEEcC-CceEEEEECCC-------cE-EEcCEEEECCC--Ccccc
Confidence 788888888888655 9999999998653 23466776543 46 89999999999 44543
No 214
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.47 E-value=1.7e-06 Score=80.74 Aligned_cols=107 Identities=13% Similarity=0.000 Sum_probs=79.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. ....++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~d~~~~~~ 233 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVLR---------------------------------SFDSMISTN 233 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875320 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCcee--EEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREI--EEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~--~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.++.. +++++|.+++..++.....+.+.+...+ +. .+ +.+|.||+|+| ..|+.
T Consensus 234 ~~~~l~~~gv~i--~~~~~v~~i~~~~~~~~~~v~~~~~~~g--~~~g~~-~~~D~vi~a~G--~~p~~ 295 (478)
T 3dk9_A 234 CTEELENAGVEV--LKFSQVKEVKKTLSGLEVSMVTAVPGRL--PVMTMI-PDVDCLLWAIG--RVPNT 295 (478)
T ss_dssp HHHHHHHTTCEE--ETTEEEEEEEECSSSEEEEEEECCTTSC--CEEEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcCCCcEEEEEEccCCCC--cccceE-EEcCEEEEeec--cccCC
Confidence 888888888665 9999999998654211355666543221 11 56 89999999999 44544
No 215
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.46 E-value=9.1e-07 Score=83.09 Aligned_cols=97 Identities=12% Similarity=0.138 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+.
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~ 228 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLP-------------------------------Y--EDADAALV 228 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSC-------------------------------C--SSHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------------------------------c--cCHHHHHH
Confidence 46899999999999999999999999999999875320 0 12367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
+.+.+++.|+.. +++++|.+++.++ +.+.|+..++ .+ +.+|.||+|+|..
T Consensus 229 l~~~l~~~GV~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 229 LEESFAERGVRL--FKNARAASVTRTG--AGVLVTMTDG-------RT-VEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHHTTCEE--ETTCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCCEE
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEeC--CEEEEEECCC-------cE-EEcCEEEECCCCC
Confidence 888888888665 9999999998654 4455654332 56 8999999999943
No 216
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.46 E-value=1e-06 Score=82.37 Aligned_cols=103 Identities=12% Similarity=0.066 Sum_probs=77.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ..+++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------------------------------K--FDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------------------------------c--cCHHHHHH
Confidence 46899999999999999999999999999999875320 0 12367778
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.|+.. +++++|.+++.+++.....|++.++ + .+ +.+|.||+|+| ..|+.
T Consensus 232 l~~~l~~~Gv~i--~~~~~v~~i~~~~~~~~~~v~~~~G-----~-~~-i~~D~vv~a~G--~~p~~ 287 (479)
T 2hqm_A 232 ITDHYVKEGINV--HKLSKIVKVEKNVETDKLKIHMNDS-----K-SI-DDVDELIWTIG--RKSHL 287 (479)
T ss_dssp HHHHHHHHTCEE--ECSCCEEEEEECC-CCCEEEEETTS-----C-EE-EEESEEEECSC--EEECC
T ss_pred HHHHHHhCCeEE--EeCCEEEEEEEcCCCcEEEEEECCC-----c-EE-EEcCEEEECCC--CCCcc
Confidence 888888888655 9999999997654221356666543 1 46 89999999999 44543
No 217
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.46 E-value=4.5e-06 Score=78.01 Aligned_cols=101 Identities=20% Similarity=0.083 Sum_probs=78.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++...+. ....++.++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 232 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIVLR----------------------------------GFDQQMAEL 232 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCCc----------------------------------ccCHHHHHH
Confidence 4689999999999999999999999999998853210 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++..+ ++...|++.++..+ +..+ +.+|.||+|+|.
T Consensus 233 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~~~~--~~~~-~~~D~vi~a~G~ 287 (483)
T 3dgh_A 233 VAASMEERGIPF--LRKTVPLSVEKQD-DGKLLVKYKNVETG--EESE-DVYDTVLWAIGR 287 (483)
T ss_dssp HHHHHHHTTCCE--EETEEEEEEEECT-TSCEEEEEEETTTC--CEEE-EEESEEEECSCE
T ss_pred HHHHHHhCCCEE--EeCCEEEEEEEcC-CCcEEEEEecCCCC--ceeE-EEcCEEEECccc
Confidence 888888888766 9999999998754 24466777765432 2357 899999999993
No 218
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.45 E-value=9.6e-07 Score=80.64 Aligned_cols=98 Identities=18% Similarity=0.169 Sum_probs=76.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~--------------------------------~~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMAR--------------------------------VVTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhh--------------------------------ccCHHHHHH
Confidence 468999999999999999999999999999998753200 012467888
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ .....|++.++ .+ +.||.||+|+|.
T Consensus 190 l~~~l~~~GV~i--~~~~~v~~i~~~~-~~v~~V~~~dG-------~~-i~aD~Vv~a~G~ 239 (404)
T 3fg2_P 190 FHDRHSGAGIRM--HYGVRATEIAAEG-DRVTGVVLSDG-------NT-LPCDLVVVGVGV 239 (404)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEEET-TEEEEEEETTS-------CE-EECSEEEECCCE
T ss_pred HHHHHHhCCcEE--EECCEEEEEEecC-CcEEEEEeCCC-------CE-EEcCEEEECcCC
Confidence 888888888665 9999999997653 12234666554 56 899999999994
No 219
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.45 E-value=3.5e-06 Score=78.83 Aligned_cols=105 Identities=15% Similarity=0.002 Sum_probs=79.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++...+. .-..++.++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~l~----------------------------------~~d~~~~~~ 230 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIPLR----------------------------------GFDQQMSSL 230 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST----------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcccc----------------------------------cCCHHHHHH
Confidence 4579999999999999999999999999999864210 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. ++++++.+++..+ ++...+++.+..++ +..+ +.+|.||+|+| ..|+.
T Consensus 231 l~~~l~~~gv~~--~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-~~~D~vi~a~G--~~p~~ 289 (488)
T 3dgz_A 231 VTEHMESHGTQF--LKGCVPSHIKKLP-TNQLQVTWEDHASG--KEDT-GTFDTVLWAIG--RVPET 289 (488)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEECT-TSCEEEEEEETTTT--EEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEEcC-CCcEEEEEEeCCCC--eeEE-EECCEEEEccc--CCccc
Confidence 888888888665 9999999997643 35566777664332 3346 78999999999 44543
No 220
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.45 E-value=1.3e-07 Score=87.68 Aligned_cols=41 Identities=29% Similarity=0.383 Sum_probs=38.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
++||+|||||++||++|..|++.|++|+|+|+++.+||.+.
T Consensus 5 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~ 45 (453)
T 2yg5_A 5 QRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTW 45 (453)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCcee
Confidence 47999999999999999999999999999999999998764
No 221
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.44 E-value=1.6e-07 Score=87.60 Aligned_cols=43 Identities=33% Similarity=0.418 Sum_probs=38.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
..+||+|||||++||++|..|++.|++|+|+|+++.+||....
T Consensus 15 ~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~~t 57 (478)
T 2ivd_A 15 TGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAVGT 57 (478)
T ss_dssp --CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTCCE
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceeee
Confidence 3579999999999999999999999999999999999985443
No 222
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.44 E-value=1.9e-07 Score=87.38 Aligned_cols=42 Identities=21% Similarity=0.277 Sum_probs=38.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCcc
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w 46 (325)
+..+||+|||||++||++|..|.+.|++|+|+|+++.+||.+
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~ 50 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRV 50 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTC
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCce
Confidence 346799999999999999999999999999999999999954
No 223
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.43 E-value=1.5e-06 Score=80.93 Aligned_cols=97 Identities=14% Similarity=0.168 Sum_probs=77.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
..+++|||+|++|+.+|..|.+. |.+|+++++.+.+... ....++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPG--------------------------------FTSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTT--------------------------------TSCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCccccc--------------------------------ccCHHHHH
Confidence 46899999999999999999999 9999999998753200 01246788
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
.+.+.+++.++.. +++++|.+++.++ +...+.+.++ .+ +.+|.||+|+|.
T Consensus 207 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vv~a~G~ 256 (472)
T 3iwa_A 207 MLRHDLEKNDVVV--HTGEKVVRLEGEN--GKVARVITDK-------RT-LDADLVILAAGV 256 (472)
T ss_dssp HHHHHHHHTTCEE--ECSCCEEEEEESS--SBEEEEEESS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHhcCCEE--EeCCEEEEEEccC--CeEEEEEeCC-------CE-EEcCEEEECCCC
Confidence 8888888888665 9999999998743 5566776654 46 899999999994
No 224
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.43 E-value=1.1e-06 Score=81.55 Aligned_cols=100 Identities=13% Similarity=0.116 Sum_probs=75.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|..|+.+|..|.+.|.+|+++++.+.+... ....++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYK--------------------------------YFDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhh--------------------------------hhhhhHHHH
Confidence 468999999999999999999999999999998753210 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEE-EEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWN-VKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~-v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+.+++.|+.. +++++|.+++.++ +... +.. ++ .+ +.+|.||+|+| ..|+.
T Consensus 197 l~~~l~~~Gv~i--~~~~~v~~i~~~~--~~v~~v~~-~g-------~~-i~~D~vv~a~G--~~p~~ 249 (452)
T 2cdu_A 197 LAKDYEAHGVNL--VLGSKVAAFEEVD--DEIITKTL-DG-------KE-IKSDIAILCIG--FRPNT 249 (452)
T ss_dssp HHHHHHHTTCEE--EESSCEEEEEEET--TEEEEEET-TS-------CE-EEESEEEECCC--EEECC
T ss_pred HHHHHHHCCCEE--EcCCeeEEEEcCC--CeEEEEEe-CC-------CE-EECCEEEECcC--CCCCH
Confidence 888888888665 9999999998633 4333 332 21 56 89999999999 44443
No 225
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.42 E-value=9.8e-07 Score=82.70 Aligned_cols=101 Identities=16% Similarity=0.233 Sum_probs=75.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHH
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIE 85 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (325)
...+|+|||+|+.|+.+|..|++.|.+|+++++.+.+... ....++.+
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~ 240 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAG--------------------------------YYDRDLTD 240 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TSCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhh--------------------------------HHHHHHHH
Confidence 3578999999999999999999999999999998753210 01246778
Q ss_pred HHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 86 HLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 86 yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
++.+.+++.++.. +++++|++++.++ ....+.+ ++ .+ +.+|.||+|+| ..|+.
T Consensus 241 ~l~~~l~~~GV~i--~~~~~v~~i~~~~--~v~~v~~-~g-------~~-i~~D~Vi~a~G--~~p~~ 293 (490)
T 2bc0_A 241 LMAKNMEEHGIQL--AFGETVKEVAGNG--KVEKIIT-DK-------NE-YDVDMVILAVG--FRPNT 293 (490)
T ss_dssp HHHHHHHTTTCEE--EETCCEEEEECSS--SCCEEEE-SS-------CE-EECSEEEECCC--EEECC
T ss_pred HHHHHHHhCCeEE--EeCCEEEEEEcCC--cEEEEEE-CC-------cE-EECCEEEECCC--CCcCh
Confidence 8888888888655 9999999987521 2223444 22 46 89999999999 44543
No 226
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.41 E-value=1.1e-06 Score=82.23 Aligned_cols=96 Identities=19% Similarity=0.240 Sum_probs=77.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. . ...++.+.
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------------------------------~--~~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-------------------------------N--FDYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-------------------------------c--cCHHHHHH
Confidence 46899999999999999999999999999999875320 0 11367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ +.+.|++.++ .+ +.+|.||+|+|.
T Consensus 238 l~~~l~~~Gv~i--~~~~~V~~i~~~~--~~v~v~~~~g-------~~-i~aD~Vi~A~G~ 286 (484)
T 3o0h_A 238 LNDAMVAKGISI--IYEATVSQVQSTE--NCYNVVLTNG-------QT-ICADRVMLATGR 286 (484)
T ss_dssp HHHHHHHHTCEE--ESSCCEEEEEECS--SSEEEEETTS-------CE-EEESEEEECCCE
T ss_pred HHHHHHHCCCEE--EeCCEEEEEEeeC--CEEEEEECCC-------cE-EEcCEEEEeeCC
Confidence 888888888665 9999999998754 5577777654 46 899999999994
No 227
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.41 E-value=2.6e-06 Score=74.85 Aligned_cols=100 Identities=22% Similarity=0.281 Sum_probs=73.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFR-----------------------------------AEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCccc-----------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999886421 11355666
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCC-CCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLS-PGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++. ++++++|.+++.++ .....|++.+... + +..+ +.+|.||+|+|.
T Consensus 190 l~~~l~~~gv~--i~~~~~v~~i~~~~-~~v~~v~~~~~~~~g--~~~~-i~~D~vv~a~G~ 245 (320)
T 1trb_A 190 LMDKVENGNII--LHTNRTLEEVTGDQ-MGVTGVRLRDTQNSD--NIES-LDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHTSSEE--EECSCEEEEEEECS-SSEEEEEEECCTTCC--CCEE-EECSEEEECSCE
T ss_pred HHHhcccCCeE--EEcCceeEEEEcCC-CceEEEEEEeccCCC--ceEE-EEcCEEEEEeCC
Confidence 77777777755 49999999998653 2333466654211 1 2267 899999999994
No 228
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=98.40 E-value=2.4e-07 Score=86.89 Aligned_cols=40 Identities=23% Similarity=0.349 Sum_probs=37.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
+||+|||||++||++|..|.+.|++|+|+|+++++||...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~ 79 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSW 79 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCcce
Confidence 7999999999999999999999999999999999998543
No 229
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.39 E-value=2.2e-06 Score=81.72 Aligned_cols=98 Identities=18% Similarity=0.203 Sum_probs=75.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+.+.. ....++.++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 197 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT---------------------------------PVDREMAGF 197 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch---------------------------------hcCHHHHHH
Confidence 45899999999999999999999999999999875320 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcC-----------------CCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDE-----------------ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~-----------------~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.+. ..+...+...++ .+ +.+|.||+|+|.
T Consensus 198 l~~~l~~~GV~i--~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g-------~~-i~~D~vi~a~G~ 265 (565)
T 3ntd_A 198 AHQAIRDQGVDL--RLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNG-------EL-LETDLLIMAIGV 265 (565)
T ss_dssp HHHHHHHTTCEE--EETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTS-------CE-EEESEEEECSCE
T ss_pred HHHHHHHCCCEE--EeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCC-------CE-EEcCEEEECcCC
Confidence 888888888665 9999999997631 134555665433 46 899999999994
No 230
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.37 E-value=4e-06 Score=74.19 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=73.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+. ...+..+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 4689999999999999999999999999999887421 11245566
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ +...|++.....+ +..+ +.+|.||+|+|.
T Consensus 197 l~~~l~~~gv~v--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 250 (335)
T 2zbw_A 197 LMKAHEEGRLEV--LTPYELRRVEGDE--RVRWAVVFHNQTQ--EELA-LEVDAVLILAGY 250 (335)
T ss_dssp HHHHHHTTSSEE--ETTEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHhccccCCeEE--ecCCcceeEccCC--CeeEEEEEECCCC--ceEE-EecCEEEEeecC
Confidence 777777777654 9999999998732 3335666532111 2257 899999999994
No 231
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=98.36 E-value=2.8e-07 Score=83.17 Aligned_cols=49 Identities=18% Similarity=0.253 Sum_probs=42.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEe
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRL 56 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~ 56 (325)
+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+......+..+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~~g~~~ 50 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYTEDCEGIQI 50 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCEEEETTEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEeeccCCcee
Confidence 6899999999999999999999999999999999999876543344433
No 232
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=98.35 E-value=3.5e-07 Score=85.82 Aligned_cols=43 Identities=26% Similarity=0.318 Sum_probs=39.3
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
...+||+|||||++||++|..|.+.|.+|+|+|+++++||.+.
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 3467999999999999999999999999999999999999653
No 233
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.35 E-value=1.2e-06 Score=80.93 Aligned_cols=95 Identities=15% Similarity=0.176 Sum_probs=73.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++|+.+.+... ...++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~~---------------------------------~d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINKL---------------------------------MDADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCSTT---------------------------------SCGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeecccccc---------------------------------ccchhHHH
Confidence 458999999999999999999999999999998864211 01245577
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~ 152 (325)
+.+..++.++.. +++++|.+++.. .+.++++ .+ +.+|.|++|+| ..|+
T Consensus 194 ~~~~l~~~gV~i--~~~~~v~~~~~~------~v~~~~g-------~~-~~~D~vl~a~G--~~Pn 241 (437)
T 4eqs_A 194 ILDELDKREIPY--RLNEEINAINGN------EITFKSG-------KV-EHYDMIIEGVG--THPN 241 (437)
T ss_dssp HHHHHHHTTCCE--EESCCEEEEETT------EEEETTS-------CE-EECSEEEECCC--EEES
T ss_pred HHHHhhccceEE--EeccEEEEecCC------eeeecCC-------eE-EeeeeEEEEec--eecC
Confidence 788888888766 999999887532 2666554 56 89999999999 4454
No 234
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.35 E-value=7.6e-06 Score=77.18 Aligned_cols=106 Identities=19% Similarity=0.087 Sum_probs=76.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|++.|.+|+++++...+. . ...++.++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~l~--------------------------------~--~d~~~~~~ 255 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSILLR--------------------------------G--FDQDMANK 255 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCSST--------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccccc--------------------------------c--CCHHHHHH
Confidence 3579999999999999999999999999999853110 0 12467888
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCC--CCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEA--TNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~--~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. ++++++.+++..+. .+...++....+++ +..+ +.+|.||+|+| ..|+.
T Consensus 256 ~~~~l~~~GV~v--~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~--~~~~-~~~D~vi~a~G--~~p~~ 317 (519)
T 3qfa_A 256 IGEHMEEHGIKF--IRQFVPIKVEQIEAGTPGRLRVVAQSTNSE--EIIE-GEYNTVMLAIG--RDACT 317 (519)
T ss_dssp HHHHHHHTTCEE--EESEEEEEEEEEECCTTCEEEEEEEESSSS--CEEE-EEESEEEECSC--EEESC
T ss_pred HHHHHHHCCCEE--EeCCeEEEEEEccCCCCceEEEEEEECCCc--EEEE-EECCEEEEecC--CcccC
Confidence 888888888665 89988888865432 24455655443322 2246 78999999999 44543
No 235
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.35 E-value=3.9e-07 Score=82.72 Aligned_cols=44 Identities=18% Similarity=0.211 Sum_probs=40.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSY 51 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y 51 (325)
+||+|||||++|+++|..|.+.|.+|+|+|+++.+||.|....+
T Consensus 4 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~~~~ 47 (384)
T 2bi7_A 4 KKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYDARD 47 (384)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCEEEC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCccccccc
Confidence 69999999999999999999999999999999999999876433
No 236
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.32 E-value=3.9e-07 Score=84.93 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=37.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--CCeEEEecCCCCCCccC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS--IPYVILERENCYASIWK 47 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~~~Gg~w~ 47 (325)
++||+|||||++||++|..|.+.| .+|+|+|+++.+||.+.
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~ 46 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVA 46 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCC
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeE
Confidence 479999999999999999999999 99999999999998544
No 237
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.31 E-value=4.6e-07 Score=84.48 Aligned_cols=49 Identities=35% Similarity=0.494 Sum_probs=41.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCCCCCccCCCCCCce
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILERENCYASIWKKYSYDRL 54 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~~Gg~w~~~~y~~~ 54 (325)
..+||+|||||++||++|..|.+.|+ +|+|+|+++.+||.|....+.+.
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~~~~~~~ 52 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHKTNFAGI 52 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceeecccCCc
Confidence 35799999999999999999999999 89999999999998776444433
No 238
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.31 E-value=2.8e-06 Score=79.67 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=73.3
Q ss_pred CCeEEEECCChHHHHHHHHHHh----cCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSL----QSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQ 82 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~----~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (325)
..+|+|||+|+.|+.+|..|.+ .|.+|+++++.+.+.+ ..+ ..+
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~------------------------------~~l--~~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG------------------------------KIL--PEY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT------------------------------TTS--CHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc------------------------------ccC--CHH
Confidence 4689999999999999999987 4789999988764210 001 146
Q ss_pred HHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 83 FIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 83 ~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+++.+.+++.++.. +++++|.+++.++ +...|++.++ .+ +.+|.||+|+|.
T Consensus 228 ~~~~~~~~l~~~GV~v--~~~~~V~~i~~~~--~~~~v~l~dG-------~~-i~aD~Vv~a~G~ 280 (493)
T 1m6i_A 228 LSNWTMEKVRREGVKV--MPNAIVQSVGVSS--GKLLIKLKDG-------RK-VETDHIVAAVGL 280 (493)
T ss_dssp HHHHHHHHHHTTTCEE--ECSCCEEEEEEET--TEEEEEETTS-------CE-EEESEEEECCCE
T ss_pred HHHHHHHHHHhcCCEE--EeCCEEEEEEecC--CeEEEEECCC-------CE-EECCEEEECCCC
Confidence 7778888888888655 9999999997653 4456666543 56 899999999994
No 239
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.31 E-value=1.2e-06 Score=79.01 Aligned_cols=92 Identities=16% Similarity=0.215 Sum_probs=72.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHHH
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEHL 87 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~yl 87 (325)
.+++|||+|+.|+.+|..|++.|.+|+++|+.+.+.. -.+++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~----------------------------------~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG----------------------------------LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT----------------------------------CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc----------------------------------CCHHHHHHH
Confidence 6899999999999999999999999999999875321 124677888
Q ss_pred HHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCC
Q 020533 88 DHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 88 ~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~ 152 (325)
.+..++.++.. +++++|.+++. . .|++.+ .+ +.+|.||+|+| ..|+
T Consensus 190 ~~~l~~~gV~i--~~~~~v~~i~~----~--~v~~~~--------g~-i~~D~vi~a~G--~~p~ 235 (367)
T 1xhc_A 190 KDMLEETGVKF--FLNSELLEANE----E--GVLTNS--------GF-IEGKVKICAIG--IVPN 235 (367)
T ss_dssp HHHHHHTTEEE--ECSCCEEEECS----S--EEEETT--------EE-EECSCEEEECC--EEEC
T ss_pred HHHHHHCCCEE--EcCCEEEEEEe----e--EEEECC--------CE-EEcCEEEECcC--CCcC
Confidence 88888888655 89999998861 2 355543 35 78999999999 4444
No 240
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.29 E-value=7.3e-07 Score=82.24 Aligned_cols=43 Identities=16% Similarity=0.296 Sum_probs=39.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
..+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 5 ~~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 5 EEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 4579999999999999999999999999999999999997654
No 241
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.24 E-value=6.1e-06 Score=76.68 Aligned_cols=96 Identities=14% Similarity=0.101 Sum_probs=75.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~---------------------------------~~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS---------------------------------RFDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc---------------------------------ccCHHHHHH
Confidence 46899999999999999999999999999999875310 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEE-EeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVK-ASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~-~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.++ ++...|+ +.+ .+ +.+|.||+|+|.
T Consensus 217 l~~~l~~~Gv~i--~~~~~v~~i~~~~-~~~~~v~~~~~--------g~-i~aD~Vv~a~G~ 266 (463)
T 4dna_A 217 LHAAMEEKGIRI--LCEDIIQSVSADA-DGRRVATTMKH--------GE-IVADQVMLALGR 266 (463)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEECT-TSCEEEEESSS--------CE-EEESEEEECSCE
T ss_pred HHHHHHHCCCEE--ECCCEEEEEEEcC-CCEEEEEEcCC--------Ce-EEeCEEEEeeCc
Confidence 888888888665 9999999998754 2335566 544 34 789999999994
No 242
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.24 E-value=8.8e-06 Score=72.80 Aligned_cols=98 Identities=15% Similarity=0.174 Sum_probs=70.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. ..++.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~-----------------------------------~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQG-----------------------------------HGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSS-----------------------------------CSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCC-----------------------------------CHHHHHH
Confidence 46899999999999999999999999999998874310 0134555
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCc-EEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNM-WNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~-~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+..++.++. ++++++|.+++.++ +. ..|++...++ +... +.+|.||+|+|.
T Consensus 208 l~~~~~~~gv~--i~~~~~v~~i~~~~--~~v~~v~~~~~~g---~~~~-i~~D~vi~a~G~ 261 (360)
T 3ab1_A 208 VERARANGTID--VYLETEVASIEESN--GVLTRVHLRSSDG---SKWT-VEADRLLILIGF 261 (360)
T ss_dssp SHHHHHHTSEE--EESSEEEEEEEEET--TEEEEEEEEETTC---CEEE-EECSEEEECCCB
T ss_pred HHHHhhcCceE--EEcCcCHHHhccCC--CceEEEEEEecCC---CeEE-EeCCEEEECCCC
Confidence 66666666654 49999999998753 32 2455542111 2257 899999999994
No 243
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.21 E-value=1.6e-05 Score=70.11 Aligned_cols=96 Identities=18% Similarity=0.161 Sum_probs=69.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+.. . +.
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~-----------------------------------~----~~ 213 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA-----------------------------------S----TI 213 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS-----------------------------------C----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC-----------------------------------C----HH
Confidence 46899999999999999999999999999998875310 1 22
Q ss_pred HHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+.+ .++. ++++++|.+++.++ .....|++.+..++ +..+ +.+|.||+|+|.
T Consensus 214 ~~~~l~~~~gv~--i~~~~~v~~i~~~~-~~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 269 (338)
T 3itj_A 214 MQKRAEKNEKIE--ILYNTVALEAKGDG-KLLNALRIKNTKKN--EETD-LPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHCTTEE--EECSEEEEEEEESS-SSEEEEEEEETTTT--EEEE-EECSEEEECSCE
T ss_pred HHHHHHhcCCeE--EeecceeEEEEccc-CcEEEEEEEECCCC--ceEE-EEeCEEEEEeCC
Confidence 2333333 3644 48999999998754 22344777663322 2367 899999999994
No 244
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.21 E-value=1.5e-05 Score=69.64 Aligned_cols=95 Identities=19% Similarity=0.174 Sum_probs=67.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.+.+|+++++.+.+. .. +.
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~----~~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------AD----QV 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SC----HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------cc----HH
Confidence 4689999999999999999999999999999887521 00 12
Q ss_pred HHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcE-EEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+.+ .++ .+++++++.++..++ +.. .|++.+..++ +..+ +.+|.||+|+|.
T Consensus 185 ~~~~l~~~~gv--~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 240 (310)
T 1fl2_A 185 LQDKLRSLKNV--DIILNAQTTEVKGDG--SKVVGLEYRDRVSG--DIHN-IELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHTCTTE--EEESSEEEEEEEESS--SSEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred HHHHHhhCCCe--EEecCCceEEEEcCC--CcEEEEEEEECCCC--cEEE-EEcCEEEEeeCC
Confidence 3333343 454 458999999997653 333 4666653222 2357 899999999994
No 245
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.19 E-value=7.5e-06 Score=78.43 Aligned_cols=94 Identities=13% Similarity=0.176 Sum_probs=74.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|.+|+.+|..|.+.|.+|+++++.+.+.. ....++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~---------------------------------~~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMP---------------------------------PIDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT---------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCcccc---------------------------------cCCHHHHHH
Confidence 46899999999999999999999999999998875320 012367788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. +++++|.+++.+. + .|.+.++ .+ +.+|.||+|+|.
T Consensus 234 l~~~l~~~GV~i--~~~~~v~~i~~~~--~--~v~~~~g-------~~-i~~D~Vi~a~G~ 280 (588)
T 3ics_A 234 VHEHMKNHDVEL--VFEDGVDALEENG--A--VVRLKSG-------SV-IQTDMLILAIGV 280 (588)
T ss_dssp HHHHHHHTTCEE--ECSCCEEEEEGGG--T--EEEETTS-------CE-EECSEEEECSCE
T ss_pred HHHHHHHcCCEE--EECCeEEEEecCC--C--EEEECCC-------CE-EEcCEEEEccCC
Confidence 888888888655 8999999997643 2 3555543 56 899999999994
No 246
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.19 E-value=5.8e-06 Score=74.11 Aligned_cols=108 Identities=10% Similarity=0.125 Sum_probs=71.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+... . + + +.......+.++
T Consensus 166 ~~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~----~--------------~-------d-~~~~~~~~~~~~ 219 (369)
T 3d1c_A 166 KGQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP----D--------------A-------D-PSVRLSPYTRQR 219 (369)
T ss_dssp SSEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHH
T ss_pred CCEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC----C--------------C-------C-CCccCCHHHHHH
Confidence 358999999999999999999999999999998753200 0 0 0 011122355667
Q ss_pred HHHHHHHcC-CCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFN-IGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~-l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.+ +.. +.+++|.+++.++ +.+.|++.++. .. ..+|.||+|+| ..|+.
T Consensus 220 l~~~l~~~g~v~~--~~~~~v~~i~~~~--~~~~v~~~~g~------~~-~~~d~vi~a~G--~~~~~ 274 (369)
T 3d1c_A 220 LGNVIKQGARIEM--NVHYTVKDIDFNN--GQYHISFDSGQ------SV-HTPHEPILATG--FDATK 274 (369)
T ss_dssp HHHHHHTTCCEEE--ECSCCEEEEEEET--TEEEEEESSSC------CE-EESSCCEECCC--BCGGG
T ss_pred HHHHHhhCCcEEE--ecCcEEEEEEecC--CceEEEecCCe------Ee-ccCCceEEeec--cCCcc
Confidence 777766664 554 8899999987644 45667776541 22 34699999999 44543
No 247
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.18 E-value=8e-06 Score=75.56 Aligned_cols=95 Identities=16% Similarity=0.239 Sum_probs=69.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... ....++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~--------------------------------~~~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRR--------------------------------SFDKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh--------------------------------hcCHHHHHH
Confidence 468999999999999999999999999999998753210 011366777
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+..++. ..++++++|.+++.++ .......++ .+ +.+|.||+|+|.
T Consensus 196 l~~~l~~~---v~i~~~~~v~~i~~~~---~v~~v~~~g-------~~-i~~D~Vv~a~G~ 242 (449)
T 3kd9_A 196 LEEKLKKH---VNLRLQEITMKIEGEE---RVEKVVTDA-------GE-YKAELVILATGI 242 (449)
T ss_dssp HHHHHTTT---SEEEESCCEEEEECSS---SCCEEEETT-------EE-EECSEEEECSCE
T ss_pred HHHHHHhC---cEEEeCCeEEEEeccC---cEEEEEeCC-------CE-EECCEEEEeeCC
Confidence 77777665 4458999999887543 222222222 57 899999999994
No 248
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.17 E-value=2.4e-05 Score=68.81 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=69.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|.+|+.+|..|.+.+.+|+++++.+.+.. . ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~----------------------------------~-~~~--- 195 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA----------------------------------H-EHS--- 195 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS----------------------------------C-HHH---
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc----------------------------------c-HHH---
Confidence 46899999999999999999999999999998874210 0 111
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
.+.+++.++.. +.++++.+++.++ +...|++.+...+ +..+ +.+|.||+|+|.
T Consensus 196 -~~~l~~~gv~~--~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G~ 248 (332)
T 3lzw_A 196 -VENLHASKVNV--LTPFVPAELIGED--KIEQLVLEEVKGD--RKEI-LEIDDLIVNYGF 248 (332)
T ss_dssp -HHHHHHSSCEE--ETTEEEEEEECSS--SCCEEEEEETTSC--CEEE-EECSEEEECCCE
T ss_pred -HHHHhcCCeEE--EeCceeeEEecCC--ceEEEEEEecCCC--ceEE-EECCEEEEeecc
Confidence 12245667554 8999999997654 3456777664332 2367 899999999994
No 249
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.16 E-value=1.5e-06 Score=80.60 Aligned_cols=42 Identities=21% Similarity=0.301 Sum_probs=38.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWK 47 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~ 47 (325)
..+||+|||+|++|+++|..|++.|.+|+++|+++.+||.+.
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~ 60 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETA 60 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGC
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCcc
Confidence 457999999999999999999999999999999999998543
No 250
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.14 E-value=2.8e-05 Score=68.19 Aligned_cols=96 Identities=20% Similarity=0.165 Sum_probs=67.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l--- 196 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAY--- 196 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999876421 00122
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
.+.+.+.++.. ++++++.++..++ .....|.+.+...+ +..+ +.+|.||+|+|.
T Consensus 197 -~~~l~~~gv~i--~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 250 (319)
T 3cty_A 197 -VQEIKKRNIPY--IMNAQVTEIVGDG-KKVTGVKYKDRTTG--EEKL-IETDGVFIYVGL 250 (319)
T ss_dssp -HHHHHHTTCCE--ECSEEEEEEEESS-SSEEEEEEEETTTC--CEEE-ECCSEEEECCCE
T ss_pred -HHHHhcCCcEE--EcCCeEEEEecCC-ceEEEEEEEEcCCC--ceEE-EecCEEEEeeCC
Confidence 33344567655 9999999998653 11234555532111 2257 899999999994
No 251
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.14 E-value=9.4e-06 Score=71.52 Aligned_cols=96 Identities=16% Similarity=0.248 Sum_probs=66.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+.. ...+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-----------------------------------~~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA-----------------------------------NKVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS-----------------------------------CHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc-----------------------------------chHH---
Confidence 46899999999999999999999999999998864210 0122
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
..+..++.++ .++++++++++..++ ....|.+.+...+ +..+ +.+|.||+|+|.
T Consensus 194 ~~~l~~~~gv--~i~~~~~v~~i~~~~--~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 247 (325)
T 2q7v_A 194 QARAFANPKM--KFIWDTAVEEIQGAD--SVSGVKLRNLKTG--EVSE-LATDGVFIFIGH 247 (325)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred HHHHHhcCCc--eEecCCceEEEccCC--cEEEEEEEECCCC--cEEE-EEcCEEEEccCC
Confidence 2222223354 458999999997642 3335666542111 2257 899999999994
No 252
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.13 E-value=2.6e-06 Score=76.45 Aligned_cols=36 Identities=28% Similarity=0.420 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+||+|||||++|+++|+.|+++|.+|+|+|+...
T Consensus 5 ~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~~ 40 (363)
T 1c0p_A 5 SQKRVVVLGSGVIGLSSALILARKGYSVHILARDLP 40 (363)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccCC
Confidence 457999999999999999999999999999999753
No 253
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.13 E-value=1.4e-05 Score=74.39 Aligned_cols=104 Identities=18% Similarity=0.267 Sum_probs=72.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.|.+|+++++.+.+... + ..+++.+.
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------------------------------~-~d~~~~~~ 219 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT-------------------------------L-EDQDIVNT 219 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------------------------------S-CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC-------------------------------C-CCHHHHHH
Confidence 468999999999999999999999999999998753210 0 01345555
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFTP 154 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~p 154 (325)
+.+..+ ..++++++|.+++.++ .+...+.+.+.++ +..+ +.+|.||+|+| ..|+..
T Consensus 220 l~~~l~-----v~i~~~~~v~~i~~~~-~~~v~v~~~~~~G---~~~~-i~~D~vi~a~G--~~p~~~ 275 (466)
T 3l8k_A 220 LLSILK-----LNIKFNSPVTEVKKIK-DDEYEVIYSTKDG---SKKS-IFTNSVVLAAG--RRPVIP 275 (466)
T ss_dssp HHHHHC-----CCEECSCCEEEEEEEE-TTEEEEEECCTTS---CCEE-EEESCEEECCC--EEECCC
T ss_pred HHhcCE-----EEEEECCEEEEEEEcC-CCcEEEEEEecCC---ceEE-EEcCEEEECcC--CCcccc
Confidence 554433 4458999999987643 1445566653111 2257 89999999999 445443
No 254
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=98.12 E-value=1.5e-06 Score=79.97 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=31.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
++||+|||||++|+++|..|++.|++|+|+|+.+
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4799999999999999999999999999999986
No 255
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=98.12 E-value=2.4e-06 Score=82.97 Aligned_cols=43 Identities=28% Similarity=0.344 Sum_probs=39.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
..++|+|||||++||++|..|.+.|++|+|+|+++.+||.+..
T Consensus 106 ~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 106 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 4579999999999999999999999999999999999986544
No 256
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.11 E-value=1.8e-05 Score=69.80 Aligned_cols=98 Identities=18% Similarity=0.285 Sum_probs=67.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 4689999999999999999999999999999987531 00111
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcE-EEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
..+..++.++ .+++++++.+++.+++.... .|.+.+...+ +..+ +.+|.||+|+|.
T Consensus 201 ~~~~~~~~gv--~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 257 (333)
T 1vdc_A 201 QQRALSNPKI--DVIWNSSVVEAYGDGERDVLGGLKVKNVVTG--DVSD-LKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESSSSSSEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred HHHHHhCCCe--eEecCCceEEEeCCCCccceeeEEEEecCCC--ceEE-EecCEEEEEeCC
Confidence 1233344554 45889999999865411132 3666542111 2257 899999999994
No 257
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.11 E-value=6e-05 Score=72.31 Aligned_cols=105 Identities=15% Similarity=0.089 Sum_probs=72.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|..|+.+|..|++.|.+|+++++. .+. + . ...++.++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l----------------------~---------~--~d~~~~~~ 331 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL----------------------R---------G--FDQQMAEK 331 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS----------------------T---------T--SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc----------------------C---------c--CCHHHHHH
Confidence 357999999999999999999999999999987 211 0 0 11356777
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEc-----C--CCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYD-----E--ATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~-----~--~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
+.+..++.++.. ++++++.++... + ..+...+.....++ +... +.+|.||+|+| ..|+.
T Consensus 332 ~~~~l~~~gv~i--~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g---~~~~-~~~D~vi~a~G--~~p~~ 397 (598)
T 2x8g_A 332 VGDYMENHGVKF--AKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDG---KKFE-EEFETVIFAVG--REPQL 397 (598)
T ss_dssp HHHHHHHTTCEE--EETEEEEEEEEEECCBTTTTBCCEEEEEEEETTS---CEEE-EEESEEEECSC--EEECG
T ss_pred HHHHHHhCCCEE--EECCeEEEEEeccccccccCCCceEEEEEEeCCC---cEEe-ccCCEEEEEeC--Ccccc
Confidence 888888888655 889888877542 1 12445555432222 2234 56999999999 44543
No 258
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.10 E-value=2.3e-05 Score=68.54 Aligned_cols=96 Identities=21% Similarity=0.232 Sum_probs=69.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .+ ++
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~-----------------------------------~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA-----------------------------------QP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS-----------------------------------CH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc-----------------------------------CH---HH
Confidence 46899999999999999999999999999998875310 01 23
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+..++.++ .+++++++.+++.++ ....|++.+...+ +..+ +.+|.||+|+|.
T Consensus 196 ~~~~~~~~gv--~~~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-~~~D~vv~a~G~ 249 (323)
T 3f8d_A 196 VETVKKKPNV--EFVLNSVVKEIKGDK--VVKQVVVENLKTG--EIKE-LNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS--SEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHHHHhCCCc--EEEeCCEEEEEeccC--ceeEEEEEECCCC--ceEE-EEcCEEEEEECC
Confidence 3333344454 458999999997653 4455777663222 2257 899999999994
No 259
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.09 E-value=1.2e-05 Score=70.16 Aligned_cols=97 Identities=15% Similarity=0.151 Sum_probs=66.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.|.+|+++++.+.+. ...++.
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~~-- 185 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPITL-- 185 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHHH--
Confidence 4689999999999999999999999999999886421 001222
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
....++.+ ..+++++++.+++.++ ++...|.+.+...+ +..+ +.+|.||+|+|.
T Consensus 186 -~~l~~~~g--v~v~~~~~v~~i~~~~-~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 239 (311)
T 2q0l_A 186 -EHAKNNDK--IEFLTPYVVEEIKGDA-SGVSSLSIKNTATN--EKRE-LVVPGFFIFVGY 239 (311)
T ss_dssp -HHHHTCTT--EEEETTEEEEEEEEET-TEEEEEEEEETTTC--CEEE-EECSEEEECSCE
T ss_pred -HHHhhCCC--eEEEeCCEEEEEECCC-CcEeEEEEEecCCC--ceEE-EecCEEEEEecC
Confidence 22222345 4458899999997653 12224666532111 2257 899999999994
No 260
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.09 E-value=8.4e-06 Score=76.49 Aligned_cols=100 Identities=15% Similarity=0.149 Sum_probs=72.0
Q ss_pred CeEEEECCChHHHHHHHHHHhc--------------CCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--------------SIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--------------g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~ 73 (325)
..++|||||+.|+.+|..|.+. ..+|+++|..+.+-.
T Consensus 218 ~~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il~----------------------------- 268 (502)
T 4g6h_A 218 LSIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVLN----------------------------- 268 (502)
T ss_dssp TEEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSST-----------------------------
T ss_pred cceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEecccccccc-----------------------------
Confidence 3699999999999999988753 368999999986421
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 74 ~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
. -.+++.+++.+..++.|+.. +++++|++++.+ ...+.....++. ....+ +.||.||+|+|..
T Consensus 269 --~--~~~~~~~~~~~~L~~~GV~v--~~~~~v~~v~~~----~~~~~~~~~dg~-~~~~~-i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 269 --M--FEKKLSSYAQSHLENTSIKV--HLRTAVAKVEEK----QLLAKTKHEDGK-ITEET-IPYGTLIWATGNK 331 (502)
T ss_dssp --T--SCHHHHHHHHHHHHHTTCEE--ETTEEEEEECSS----EEEEEEECTTSC-EEEEE-EECSEEEECCCEE
T ss_pred --C--CCHHHHHHHHHHHHhcceee--ecCceEEEEeCC----ceEEEEEecCcc-cceee-eccCEEEEccCCc
Confidence 1 12478889999999999765 999999998643 233333322211 01257 8999999999943
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.08 E-value=1.2e-05 Score=71.24 Aligned_cols=96 Identities=14% Similarity=0.192 Sum_probs=66.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|.+.|.+|+++++.+.+.. . ..+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~~--------------------------~---------~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRA--------------------------S---------KIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCSS--------------------------C---------TTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCCc--------------------------c---------HHHH--
Confidence 46899999999999999999999999999998864310 0 0111
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
.+..++.++. ++++++|.+++.++ +...|.+.+...+ +..+ +.+|.||+|+|.
T Consensus 198 -~~~~~~~gV~--v~~~~~v~~i~~~~--~~~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 250 (335)
T 2a87_A 198 -DRARNNDKIR--FLTNHTVVAVDGDT--TVTGLRVRDTNTG--AETT-LPVTGVFVAIGH 250 (335)
T ss_dssp -HHHHHCTTEE--EECSEEEEEEECSS--SCCEEEEEEETTS--CCEE-ECCSCEEECSCE
T ss_pred -HHHhccCCcE--EEeCceeEEEecCC--cEeEEEEEEcCCC--ceEE-eecCEEEEccCC
Confidence 1233445644 48899999987653 3233555432111 2257 899999999994
No 262
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=98.08 E-value=3.5e-06 Score=83.56 Aligned_cols=43 Identities=28% Similarity=0.344 Sum_probs=39.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKK 48 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~ 48 (325)
..++|+|||||++||++|..|.+.|++|+|||+.+.+||.+..
T Consensus 277 ~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 277 KTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 3579999999999999999999999999999999999986543
No 263
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.05 E-value=2.2e-06 Score=77.76 Aligned_cols=84 Identities=13% Similarity=0.044 Sum_probs=65.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|++.|.+|+++|+.+.+... .-..++.++
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~--------------------------------~~~~~~~~~ 193 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLER--------------------------------QLDRDGGLF 193 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTT--------------------------------TSCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchh--------------------------------hcCHHHHHH
Confidence 358999999999999999999999999999999864210 012467788
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+..++.++.. ++++++.++ + .+ +.+|.||+|+|.
T Consensus 194 ~~~~l~~~gV~~--~~~~~v~~i---------------g-------~~-~~~D~vv~a~G~ 229 (385)
T 3klj_A 194 LKDKLDRLGIKI--YTNSNFEEM---------------G-------DL-IRSSCVITAVGV 229 (385)
T ss_dssp HHHHHHTTTCEE--ECSCCGGGC---------------H-------HH-HHHSEEEECCCE
T ss_pred HHHHHHhCCCEE--EeCCEEEEc---------------C-------eE-EecCeEEECcCc
Confidence 888888888654 777776544 1 45 789999999994
No 264
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.03 E-value=3.5e-06 Score=81.13 Aligned_cols=41 Identities=17% Similarity=0.210 Sum_probs=37.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCcc
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIW 46 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w 46 (325)
..+||+|||||++|+++|..|++.|++|+|+|+.+..||.+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred ccCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 35799999999999999999999999999999999888755
No 265
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.93 E-value=4.7e-06 Score=74.39 Aligned_cols=34 Identities=26% Similarity=0.516 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcC------CCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS------IPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g------~~v~v~e~~~~ 41 (325)
+||+|||||++|+++|+.|+++| .+|+|+|++..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~~ 40 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRFT 40 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSCG
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCCC
Confidence 48999999999999999999998 89999999863
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.93 E-value=6.6e-05 Score=70.79 Aligned_cols=95 Identities=20% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|.+|+.+|..|++.|.+|+++++.+.+. . . .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~-~----~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------A-D----QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------S-C----HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------c-C----HH
Confidence 4689999999999999999999999999999887521 0 0 23
Q ss_pred HHHHHHH-cCCCceeeeCeEEEEEEEcCCCCcE-EEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSH-FNIGPSIRYQRSVESASYDEATNMW-NVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~-~~l~~~i~~~~~V~~i~~~~~~~~~-~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+.+ .+ ..++++++++++..++ +.. .+.+.+..++ +..+ +.+|.|++|+|.
T Consensus 396 l~~~l~~~~g--V~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g--~~~~-i~~D~vi~a~G~ 451 (521)
T 1hyu_A 396 LQDKVRSLKN--VDIILNAQTTEVKGDG--SKVVGLEYRDRVSG--DIHS-VALAGIFVQIGL 451 (521)
T ss_dssp HHHHHTTCTT--EEEECSEEEEEEEECS--SSEEEEEEEETTTC--CEEE-EECSEEEECCCE
T ss_pred HHHHHhcCCC--cEEEeCCEEEEEEcCC--CcEEEEEEEeCCCC--ceEE-EEcCEEEECcCC
Confidence 3333443 34 4458999999987643 333 4666653222 3357 899999999993
No 267
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.91 E-value=3.8e-05 Score=66.95 Aligned_cols=96 Identities=17% Similarity=0.162 Sum_probs=67.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+++|||+|+.|+.+|..|.+.+.+|+++++.+.+. .. .++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~---~~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AA---PST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SC---HHH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CC---HHH
Confidence 4689999999999999999999999999999887421 00 123
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+..++.++. +++++++.+++.++ .....|++...++ +..+ +.+|.||+|+|.
T Consensus 189 ~~~~~~~~gv~--~~~~~~v~~i~~~~-~~~~~v~~~~~~g---~~~~-~~~D~vv~a~G~ 242 (315)
T 3r9u_A 189 VEKVKKNEKIE--LITSASVDEVYGDK-MGVAGVKVKLKDG---SIRD-LNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHHCTTEE--EECSCEEEEEEEET-TEEEEEEEECTTS---CEEE-ECCSCEEECSCE
T ss_pred HHHHHhcCCeE--EEeCcEEEEEEcCC-CcEEEEEEEcCCC---CeEE-eecCeEEEEEcC
Confidence 33444556644 48999999997654 1223355552111 2257 899999999994
No 268
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.86 E-value=6.7e-05 Score=65.51 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=63.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|..|+.+|..|.+.|.+|+++++.+..- .. .+ .
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~----------------------------------~~-~~---~ 193 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFR----------------------------------AS-KT---M 193 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC----------------------------------SC-HH---H
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccc----------------------------------cc-ch---h
Confidence 4689999999999999999999999999999765310 00 11 1
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGETTNPFT 153 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~~~p~~ 153 (325)
........+ ......+.+..+..... ..-.+...+...+ +..+ +.+|.|++|+| ..|+.
T Consensus 194 ~~~~~~~~~--~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~--~~~~-i~~d~vi~a~G--~~pn~ 252 (314)
T 4a5l_A 194 QERVLNHPK--IEVIWNSELVELEGDGD-LLNGAKIHNLVSG--EYKV-VPVAGLFYAIG--HSPNS 252 (314)
T ss_dssp HHHHHTCTT--EEEECSEEEEEEEESSS-SEEEEEEEETTTC--CEEE-EECSEEEECSC--EEESC
T ss_pred hhhhhcccc--eeeEeeeeeEEEEeeee-ccceeEEeecccc--ccee-eccccceEecc--cccCh
Confidence 122222223 33366666776665431 2222344333222 2367 99999999999 55554
No 269
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.86 E-value=4.1e-05 Score=74.69 Aligned_cols=98 Identities=11% Similarity=0.039 Sum_probs=69.6
Q ss_pred CCeEEEEC--CChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIG--aG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
..+|+||| +|..|+.+|..|.+.|.+|+++++.+.+..... ...+.
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~--------------------------------~~~~~ 570 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN--------------------------------NTFEV 570 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------GGTCH
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------cchhH
Confidence 45799999 999999999999999999999999876431100 01124
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
..+.+.+++.++.. +.+++|++++.+ ...+...... +..+ +.+|.||+|+|.
T Consensus 571 ~~l~~~l~~~GV~i--~~~~~V~~i~~~----~~~v~~~~~~----~~~~-i~aD~VV~A~G~ 622 (690)
T 3k30_A 571 NRIQRRLIENGVAR--VTDHAVVAVGAG----GVTVRDTYAS----IERE-LECDAVVMVTAR 622 (690)
T ss_dssp HHHHHHHHHTTCEE--EESEEEEEEETT----EEEEEETTTC----CEEE-EECSEEEEESCE
T ss_pred HHHHHHHHHCCCEE--EcCcEEEEEECC----eEEEEEccCC----eEEE-EECCEEEECCCC
Confidence 55666777778655 999999998743 2233322111 1267 899999999993
No 270
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.86 E-value=1.9e-05 Score=68.30 Aligned_cols=84 Identities=6% Similarity=-0.057 Sum_probs=62.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|++|+.+|..|.+.| +|+++++.+. .+.+.
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~----------------------------------------~~~~~ 179 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIV----------------------------------------EPDAD 179 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTC----------------------------------------CCCHH
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCC----------------------------------------CCCHH
Confidence 468999999999999999999999 9999987653 00133
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+.+++.++.. + +++|.+++.+ + .|++.++ .+ +.+|.||+|+|.
T Consensus 180 ~~~~l~~~gv~i--~-~~~v~~i~~~---~--~v~~~~g-------~~-~~~D~vi~a~G~ 224 (297)
T 3fbs_A 180 QHALLAARGVRV--E-TTRIREIAGH---A--DVVLADG-------RS-IALAGLFTQPKL 224 (297)
T ss_dssp HHHHHHHTTCEE--E-CSCEEEEETT---E--EEEETTS-------CE-EEESEEEECCEE
T ss_pred HHHHHHHCCcEE--E-cceeeeeecC---C--eEEeCCC-------CE-EEEEEEEEccCc
Confidence 455666777654 4 4788887642 1 5666654 56 899999999994
No 271
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.80 E-value=2.4e-05 Score=70.17 Aligned_cols=36 Identities=28% Similarity=0.278 Sum_probs=33.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~G 43 (325)
+||+|||||++|+.+|..|++.|.+|+|+|+++..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~ 37 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRM 37 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSC
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcC
Confidence 689999999999999999999999999999987543
No 272
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=97.79 E-value=2.4e-05 Score=74.95 Aligned_cols=48 Identities=19% Similarity=0.383 Sum_probs=43.5
Q ss_pred CCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCC
Q 020533 2 KEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKY 49 (325)
Q Consensus 2 ~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~ 49 (325)
..++.++||+|||+|..|..+|..|++.|.+|+++||++..||.|...
T Consensus 3 ~~~~~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~~ 50 (650)
T 1vg0_A 3 DNLPSDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWASF 50 (650)
T ss_dssp CCCCSBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEE
T ss_pred ccCCCcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCccccc
Confidence 344557999999999999999999999999999999999999998864
No 273
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.71 E-value=0.00013 Score=67.65 Aligned_cols=35 Identities=14% Similarity=0.051 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++++.+.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 46899999999999999999999999999998875
No 274
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.69 E-value=1.2e-05 Score=77.90 Aligned_cols=36 Identities=25% Similarity=0.418 Sum_probs=34.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC--------CCeEEEecCC-CC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS--------IPYVILEREN-CY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g--------~~v~v~e~~~-~~ 42 (325)
.++|+|||||++||++|..|.+.| ++|+|||+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999998 8999999999 88
No 275
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.63 E-value=0.00037 Score=60.76 Aligned_cols=35 Identities=17% Similarity=0.305 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRDE 179 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEecccc
Confidence 46899999999999999999999999999999875
No 276
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.63 E-value=0.00032 Score=70.96 Aligned_cols=97 Identities=12% Similarity=0.126 Sum_probs=69.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHHHH
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFIEH 86 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y 86 (325)
..+|+|||+|+.|+.+|..|.+.|.+|+|+|+.+.+. . .
T Consensus 284 gk~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~------------------------------------~-~---- 322 (965)
T 2gag_A 284 GARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS------------------------------------A-A---- 322 (965)
T ss_dssp CSSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC------------------------------------H-H----
T ss_pred CCeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc------------------------------------h-h----
Confidence 3689999999999999999999999999999987521 0 1
Q ss_pred HHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEee--cC--CCCceeEEEEEeCeEEEcccCCCCCC
Q 020533 87 LDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASN--LL--SPGREIEEYYSGRFLVVASGETTNPF 152 (325)
Q Consensus 87 l~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~--~~--~~~~~~~~~~~ad~vIiAtG~~~~p~ 152 (325)
.+.+++.++.. ++++.|.++..+++.....|++.+ .. .+ +..+ +.+|.||+|+| ..|+
T Consensus 323 -~~~l~~~GV~v--~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G--~~~~-i~~D~Vv~a~G--~~P~ 384 (965)
T 2gag_A 323 -AAQAVADGVQV--ISGSVVVDTEADENGELSAIVVAELDEARELG--GTQR-FEADVLAVAGG--FNPV 384 (965)
T ss_dssp -HHHHHHTTCCE--EETEEEEEEEECTTSCEEEEEEEEECTTCCEE--EEEE-EECSEEEEECC--EEEC
T ss_pred -HHHHHhCCeEE--EeCCEeEEEeccCCCCEEEEEEEeccccCCCC--ceEE-EEcCEEEECCC--cCcC
Confidence 23456678765 999999999763112323455554 10 01 2257 89999999999 4454
No 277
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.55 E-value=0.00039 Score=65.71 Aligned_cols=35 Identities=20% Similarity=0.328 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999885
No 278
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.53 E-value=6.3e-05 Score=70.88 Aligned_cols=36 Identities=25% Similarity=0.407 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e~~~~ 41 (325)
..||++|||+|++|+.+|.+|++ .+++|+|+|+.+.
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 46899999999999999999998 5789999998764
No 279
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.53 E-value=0.00025 Score=65.43 Aligned_cols=35 Identities=17% Similarity=0.078 Sum_probs=32.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~-v~v~e~~~~ 41 (325)
..+|+|||+|.+|+-+|..|++.+.+ |+++++.+.
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~~ 247 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGGG 247 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTCC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCCC
Confidence 46899999999999999999999998 999998864
No 280
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.51 E-value=7.2e-05 Score=70.93 Aligned_cols=36 Identities=33% Similarity=0.444 Sum_probs=33.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+.+.
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 468999999999999999999999999999999763
No 281
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.47 E-value=0.0004 Score=64.22 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIP-YVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~-v~v~e~~~~ 41 (325)
..++|+|||+|..|+-+|..+.+.|.+ |+++++.+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRDR 299 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCS
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCCc
Confidence 356899999999999999999999984 999988864
No 282
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.47 E-value=0.0013 Score=60.90 Aligned_cols=35 Identities=20% Similarity=0.260 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHH--------------------hcCC-CeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLS--------------------LQSI-PYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~--------------------~~g~-~v~v~e~~~~ 41 (325)
..+|+|||+|..|+.+|..|. +.|. +|+|+++.+.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~ 200 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGP 200 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCCh
Confidence 468999999999999999999 5687 6999998874
No 283
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.41 E-value=0.00097 Score=61.66 Aligned_cols=36 Identities=28% Similarity=0.440 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhc--------------------CC-CeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ--------------------SI-PYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~--------------------g~-~v~v~e~~~~~ 42 (325)
..+|+|||+|..|+-+|..|.+. |. +|+|+++.+.+
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~ 203 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPL 203 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChh
Confidence 46899999999999999999874 54 89999988753
No 284
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.41 E-value=0.00027 Score=65.00 Aligned_cols=103 Identities=11% Similarity=0.024 Sum_probs=64.6
Q ss_pred CeEEEECCChHH------HHHH----HHHHhcCCC-----eEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCC
Q 020533 8 VEVIMVGAGTSG------LATA----ACLSLQSIP-----YVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPS 72 (325)
Q Consensus 8 ~~v~IIGaG~~G------l~~a----~~L~~~g~~-----v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~ 72 (325)
.+++|||+|++| +..| ..|.+.|.+ |+++++.+.++... +
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~------------------l------- 204 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLG------------------I------- 204 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTT------------------T-------
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccc------------------c-------
Confidence 357899997764 4444 667777774 99999988654110 0
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 73 SYPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 73 ~~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+.+ .++.+.+.+..++.++.. +++++|++++.+ ...+.....++...+..+ +.+|.+++|+|.
T Consensus 205 --~~~---~~~~~~~~~~l~~~gI~~--~~~~~v~~v~~~----~v~~~~~~~~g~~~~~~~-i~~D~vv~~~g~ 267 (437)
T 3sx6_A 205 --QGV---GDSKGILTKGLKEEGIEA--YTNCKVTKVEDN----KMYVTQVDEKGETIKEMV-LPVKFGMMIPAF 267 (437)
T ss_dssp --TCC---TTHHHHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEEECTTSCEEEEEE-EECSEEEEECCE
T ss_pred --Ccc---hHHHHHHHHHHHHCCCEE--EcCCEEEEEECC----eEEEEecccCCccccceE-EEEeEEEEcCCC
Confidence 011 134567777888888665 999999988642 233332211110001267 899999999984
No 285
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.39 E-value=0.00021 Score=63.23 Aligned_cols=33 Identities=24% Similarity=0.401 Sum_probs=29.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|.+|+.+|..|.+.+ +++++.+.+
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 468999999999999999999998 699998874
No 286
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.37 E-value=0.00031 Score=64.38 Aligned_cols=99 Identities=14% Similarity=0.103 Sum_probs=64.6
Q ss_pred CeEEEECCChHH------HHHH----HHHHhcC----CCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCC
Q 020533 8 VEVIMVGAGTSG------LATA----ACLSLQS----IPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSS 73 (325)
Q Consensus 8 ~~v~IIGaG~~G------l~~a----~~L~~~g----~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~ 73 (325)
.+++|||+|++| +..| ..|.+.| .+|+++++.+.++.. ..
T Consensus 143 ~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~g~~~~~~V~~v~~~~~~~~~-----------------------~l--- 196 (430)
T 3h28_A 143 PGPVVIGAIPGVSCFGPAYEFALMLHYELKKRGIRYKVPMTFITSEPYLGHF-----------------------GV--- 196 (430)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCCEEEECSSSSTTCT-----------------------TT---
T ss_pred CCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCccceEEEEecCCcccccc-----------------------cc---
Confidence 357899998764 5544 5566677 489999988765310 00
Q ss_pred CCCCCCHHHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 74 YPMFVSRAQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 74 ~~~~~~~~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
..+ .++.+.+.+.+++.++.. +++++|++++.+ . +++++..+ +..+ +.+|.||+|+|..
T Consensus 197 -~~~---~~~~~~l~~~l~~~GV~i--~~~~~v~~v~~~----~--v~~~~~~~---~g~~-i~~D~vv~a~G~~ 255 (430)
T 3h28_A 197 -GGI---GASKRLVEDLFAERNIDW--IANVAVKAIEPD----K--VIYEDLNG---NTHE-VPAKFTMFMPSFQ 255 (430)
T ss_dssp -TCS---TTHHHHHHHHHHHTTCEE--ECSCEEEEECSS----E--EEEECTTS---CEEE-EECSEEEEECEEE
T ss_pred -Ccc---hHHHHHHHHHHHHCCCEE--EeCCEEEEEeCC----e--EEEEecCC---CceE-EeeeEEEECCCCc
Confidence 011 135667777888888665 999999988542 2 44444221 1267 8999999999953
No 287
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.33 E-value=0.00082 Score=65.31 Aligned_cols=29 Identities=31% Similarity=0.396 Sum_probs=25.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEE
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVI 35 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v 35 (325)
..+|+|||+|..|+.+|..|++.|.++++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 46899999999999999999999876653
No 288
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.31 E-value=0.00011 Score=69.41 Aligned_cols=35 Identities=37% Similarity=0.482 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~ 42 (325)
.+|++|||||.+|+.+|.+|++ |.+|+|+|+.+..
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 5899999999999999999999 9999999998654
No 289
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.29 E-value=0.0002 Score=67.11 Aligned_cols=38 Identities=18% Similarity=0.306 Sum_probs=34.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENCYA 43 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~G 43 (325)
..+|++|||+|++|+.+|..|.+.|.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 35899999999999999999999999999999987544
No 290
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=97.29 E-value=0.00018 Score=68.55 Aligned_cols=36 Identities=25% Similarity=0.411 Sum_probs=33.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQS-IPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~~ 41 (325)
..+|++|||||.+|+.+|.+|++.+ .+|+|+|+.+.
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 4589999999999999999999997 69999999876
No 291
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.24 E-value=0.00035 Score=54.48 Aligned_cols=41 Identities=17% Similarity=0.307 Sum_probs=33.7
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
|+......+|+|||+|..|..+|..|.+.|.+|+++|+++.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~ 53 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEY 53 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 44455567899999999999999999999999999998763
No 292
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.18 E-value=0.0019 Score=63.31 Aligned_cols=104 Identities=10% Similarity=0.000 Sum_probs=67.8
Q ss_pred CCeEEEEC--CChHHHHHHHHHHhcCCCeEEEecCCCCCCccCCCCCCceEeecCCCccCCCCCCCCCCCCCCCCHHHHH
Q 020533 7 GVEVIMVG--AGTSGLATAACLSLQSIPYVILERENCYASIWKKYSYDRLRLHLAKQFCQLPHLPFPSSYPMFVSRAQFI 84 (325)
Q Consensus 7 ~~~v~IIG--aG~~Gl~~a~~L~~~g~~v~v~e~~~~~Gg~w~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (325)
..+|+||| +|..|+.+|..|++.|.+|+++++.+ +...- .+.. . .
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~-----------------------------~~~~--~-~ 574 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM-----------------------------HFTL--E-Y 574 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH-----------------------------HHTT--C-H
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc-----------------------------cccc--c-H
Confidence 46899999 99999999999999999999999987 43100 0000 0 2
Q ss_pred HHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCC--------------CceeEEEEEeCeEEEcccCCCC
Q 020533 85 EHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSP--------------GREIEEYYSGRFLVVASGETTN 150 (325)
Q Consensus 85 ~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~--------------~~~~~~~~~ad~vIiAtG~~~~ 150 (325)
.++.+.+++.++.. ++++++++++.+ ...+.....+++ +.+..+ +.+|.||+|+| ..
T Consensus 575 ~~~~~~l~~~GV~i--~~~~~v~~i~~~----~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~aD~Vv~a~G--~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEE--LGDHFCSRIEPG----RMEIYNIWGDGSKRTYRGPGVSPRDANTSHRW-IEFDSLVLVTG--RH 645 (729)
T ss_dssp HHHHHHHHHTTCEE--ECSEEEEEEETT----EEEEEETTCSCSCCCCCCTTSCSSCCCCCCEE-EECSEEEEESC--EE
T ss_pred HHHHHHHHhCCCEE--EcCcEEEEEECC----eEEEEEecCCceEEecccccccccccCCccee-eeCCEEEECCC--CC
Confidence 34555566677654 999999988632 233332111100 001256 89999999999 44
Q ss_pred CC
Q 020533 151 PF 152 (325)
Q Consensus 151 p~ 152 (325)
|+
T Consensus 646 p~ 647 (729)
T 1o94_A 646 SE 647 (729)
T ss_dssp EC
T ss_pred CC
Confidence 44
No 293
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.17 E-value=0.00026 Score=67.36 Aligned_cols=35 Identities=34% Similarity=0.562 Sum_probs=32.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~ 40 (325)
..+|++|||||.+|+.+|.+|++. +.+|+|+|+.+
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 358999999999999999999975 78999999987
No 294
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=97.14 E-value=0.00073 Score=61.95 Aligned_cols=36 Identities=33% Similarity=0.530 Sum_probs=31.9
Q ss_pred CeEEEECcCCCHHHHHHHHhhcc--CeEEEEEecCCee
Q 020533 187 KNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSPVHV 222 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~--~~v~~~~r~~~~~ 222 (325)
|+|+|||+|..|+.+|..|.+.+ .+||++.+++.+.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~ 40 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFG 40 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCc
Confidence 68999999999999999999876 5799999998544
No 295
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.14 E-value=0.00035 Score=65.56 Aligned_cols=36 Identities=28% Similarity=0.434 Sum_probs=33.2
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|++|||+|++|+.+|.+|.+.|.+|+|+|+...
T Consensus 10 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 10 DRVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 358999999999999999999999999999998764
No 296
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.07 E-value=0.0039 Score=63.50 Aligned_cols=34 Identities=21% Similarity=0.249 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||||..|+-+|..|.+.|. +|+++++.+
T Consensus 332 ~~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 332 RGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 3589999999999999999999997 899999876
No 297
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.99 E-value=0.00061 Score=65.07 Aligned_cols=36 Identities=28% Similarity=0.438 Sum_probs=32.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSL-QSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e~~~~ 41 (325)
..+|++|||+|++|+.+|.+|.+ .|.+|+|+|+...
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~ 59 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFY 59 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCc
Confidence 35899999999999999999999 7999999998754
No 298
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.97 E-value=0.00032 Score=66.58 Aligned_cols=36 Identities=28% Similarity=0.418 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHh-cCCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSL-QSIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~-~g~~v~v~e~~~~~ 42 (325)
.+|++|||||.+|+.+|.+|++ .+.+|+|+|+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999987644
No 299
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.88 E-value=0.00067 Score=64.25 Aligned_cols=36 Identities=31% Similarity=0.412 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~~~ 42 (325)
.+|++|||+|++|+.+|.+|++. |.+|+++|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 58999999999999999999998 8999999998644
No 300
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=96.84 E-value=0.0022 Score=58.02 Aligned_cols=38 Identities=24% Similarity=0.363 Sum_probs=32.6
Q ss_pred CCCeEEEECcCCCHHHHHHHHhhcc--CeEEEEEecCCee
Q 020533 185 GGKNVLVVGSGNSGMEIALDLANHA--AKTSLVVRSPVHV 222 (325)
Q Consensus 185 ~~~~v~VvG~G~s~~e~a~~l~~~~--~~v~~~~r~~~~~ 222 (325)
.||+|+|||+|..|+.+|..|.+.+ .+|+++.+++.+.
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~ 40 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY 40 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC
Confidence 4899999999999999999998876 4799999988544
No 301
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.72 E-value=0.0041 Score=56.39 Aligned_cols=52 Identities=4% Similarity=-0.037 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccCC
Q 020533 81 AQFIEHLDHYVSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGET 148 (325)
Q Consensus 81 ~~~~~yl~~~a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~~ 148 (325)
.++.+.+.+.+++.++.. +++++|++++.+ . |++.++ .+ +.+|.||+|+|..
T Consensus 218 ~~~~~~~~~~l~~~gV~~--~~~~~v~~i~~~----~--v~~~~g-------~~-~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 218 PNSRKAVASIYNQLGIKL--VHNFKIKEIREH----E--IVDEKG-------NT-IPADITILLPPYT 269 (409)
T ss_dssp HHHHHHHHHHHHHHTCEE--ECSCCEEEECSS----E--EEETTS-------CE-EECSEEEEECCEE
T ss_pred HHHHHHHHHHHHHCCCEE--EcCCceEEECCC----e--EEECCC-------CE-EeeeEEEECCCCC
Confidence 467788888888888665 899999988642 1 666553 56 8999999999953
No 302
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.62 E-value=0.023 Score=53.09 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhc--CCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQ--SIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~~ 41 (325)
..++|+|||+|.||.-++..|++. +.+|+++-|++.
T Consensus 245 ~gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 245 KPYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred CCcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 357899999999999999999875 678999988763
No 303
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.57 E-value=0.0039 Score=47.53 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+.+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999986
No 304
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=96.48 E-value=0.0032 Score=47.54 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=31.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.++|+|||+|..|..+|..|.+.|.+|+++|+++
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3589999999999999999999999999999875
No 305
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=96.47 E-value=0.002 Score=51.21 Aligned_cols=32 Identities=38% Similarity=0.483 Sum_probs=30.9
Q ss_pred eEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 188 ~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+|+|||+|.+|+++|..|++.|.+|+++.+++
T Consensus 3 ~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~ 34 (180)
T 2ywl_A 3 DVIVVGGGPSGLSAALFLARAGLKVLVLDGGR 34 (180)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEECSC
T ss_pred eEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 69999999999999999999999999999987
No 306
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=96.37 E-value=0.0047 Score=46.92 Aligned_cols=34 Identities=15% Similarity=0.312 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999876
No 307
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=96.36 E-value=0.0036 Score=45.70 Aligned_cols=34 Identities=26% Similarity=0.334 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~ 40 (325)
..+|+|+|+|..|..++..|.+.| ++++++++++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 358999999999999999999999 8999999875
No 308
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=96.28 E-value=0.0035 Score=54.80 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=31.4
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
|+.+. ..+|+|||||..|...|..++..|++|+++|.++
T Consensus 1 Ma~p~-~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 1 MASPA-AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCC-CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 55443 3589999999999999999999999999999876
No 309
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.24 E-value=0.0068 Score=46.84 Aligned_cols=33 Identities=12% Similarity=0.121 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|+|+|..|...+..|.+.|++|+++|+++
T Consensus 4 ~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 4 DHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 479999999999999999999999999999974
No 310
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.96 E-value=0.0091 Score=45.15 Aligned_cols=33 Identities=12% Similarity=0.149 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|+|+|..|..++..|.+.|.+|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 311
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=95.91 E-value=0.011 Score=47.04 Aligned_cols=34 Identities=18% Similarity=0.225 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ-SIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~-g~~v~v~e~~~ 40 (325)
..+|+|||+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999986
No 312
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=95.90 E-value=0.0077 Score=52.32 Aligned_cols=40 Identities=18% Similarity=0.173 Sum_probs=32.1
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
|+......+|.|||+|..|..+|..|.+.|++|+++|+++
T Consensus 1 M~~~~~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 1 MSLTGTDFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCCCCCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 5444445789999999999999999999999999999875
No 313
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=95.87 E-value=0.0044 Score=51.83 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=30.5
Q ss_pred eEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 188 ~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.|+|||+|.+|.-+|..|++.|.+|+++.+++
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~ 35 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 59999999999999999999999999999876
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=95.77 E-value=0.01 Score=51.99 Aligned_cols=39 Identities=23% Similarity=0.309 Sum_probs=31.5
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
|+++ ...+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 1 m~~~-~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 1 MASP-AAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -------CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCC-CCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 5443 34689999999999999999999999999999886
No 315
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.77 E-value=0.055 Score=46.64 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=27.1
Q ss_pred CCeEEEECCCh-HHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGT-SGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~-~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+++|||+|. +++.+|..+.+.+.+++++++.+.
T Consensus 146 ~~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~ 181 (304)
T 4fk1_A 146 DQPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNE 181 (304)
T ss_dssp TSCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCC
T ss_pred CCceeeecCCCchhhhHHHHHHhCCceEEEEecccc
Confidence 35678888775 567888888888999999977653
No 316
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=95.71 E-value=0.014 Score=50.77 Aligned_cols=36 Identities=25% Similarity=0.293 Sum_probs=32.8
Q ss_pred CCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 5 AAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 5 ~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
....+|.|||.|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 7 SFEFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp CCSCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 345689999999999999999999999999999876
No 317
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=95.50 E-value=0.013 Score=48.11 Aligned_cols=32 Identities=22% Similarity=0.387 Sum_probs=30.6
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+|||+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999886
No 318
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.47 E-value=0.014 Score=53.64 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=32.3
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..++|+|||.|.+|+++|..|.++|++|+++|+++
T Consensus 8 ~~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 8 ENKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TTCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 35789999999999999999999999999999865
No 319
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=95.46 E-value=0.017 Score=50.91 Aligned_cols=34 Identities=21% Similarity=0.310 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
+.+|+|||||..|..+|..|+..|+ +++++|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 4689999999999999999999998 999999876
No 320
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=95.42 E-value=0.016 Score=52.19 Aligned_cols=35 Identities=17% Similarity=0.259 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|+|||+|..|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999874
No 321
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=95.38 E-value=0.018 Score=50.82 Aligned_cols=40 Identities=18% Similarity=0.145 Sum_probs=33.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
|+..+...+|.|||.|..|-++|..|.+.|++|+++|+++
T Consensus 2 m~~~~~~~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 2 MTTKDISRPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp ----CCSSCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCccCCCCEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 6555556789999999999999999999999999999876
No 322
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=95.31 E-value=0.007 Score=56.34 Aligned_cols=33 Identities=24% Similarity=0.409 Sum_probs=30.5
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
|+|+|||+|.+|+-+|..|++.|.+|+++++++
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 689999999999999999999999999998864
No 323
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=95.30 E-value=0.01 Score=49.27 Aligned_cols=33 Identities=39% Similarity=0.532 Sum_probs=30.8
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+++|..|++.|.+|+++.+.+
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence 479999999999999999999999999999973
No 324
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.29 E-value=0.02 Score=49.19 Aligned_cols=33 Identities=15% Similarity=0.251 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999876
No 325
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=95.27 E-value=0.015 Score=53.40 Aligned_cols=36 Identities=17% Similarity=0.390 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENCY 42 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~~ 42 (325)
.++|+|||.|.+|+++|+.|.++|++|+++|.+...
T Consensus 5 ~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 5 GKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 457999999999999999999999999999987654
No 326
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.24 E-value=0.023 Score=46.87 Aligned_cols=35 Identities=17% Similarity=0.250 Sum_probs=31.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..++|+|||||..|...+..|.+.|.+|+|+++..
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35689999999999999999999999999998754
No 327
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=95.24 E-value=0.021 Score=49.43 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999875
No 328
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=95.22 E-value=0.018 Score=52.50 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=31.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
...+|+|||+|..|+.+|..|++ |++|+++|+++.
T Consensus 35 ~~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~~ 69 (432)
T 3pid_A 35 EFMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQA 69 (432)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCHH
Confidence 44689999999999999999998 999999998763
No 329
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=95.16 E-value=0.017 Score=49.88 Aligned_cols=35 Identities=11% Similarity=0.090 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|.|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 35899999999999999999999999999999874
No 330
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=95.15 E-value=0.017 Score=51.51 Aligned_cols=36 Identities=14% Similarity=0.147 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
...+|+|||+|..|+.+|+.|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999998863
No 331
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=95.14 E-value=0.018 Score=54.35 Aligned_cols=35 Identities=17% Similarity=0.325 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|+|||+|.+|+.+|..|++.+.+|++|++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 46899999999999999999999999999999985
No 332
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.11 E-value=0.021 Score=50.01 Aligned_cols=35 Identities=23% Similarity=0.408 Sum_probs=30.5
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
.+.+|+|||+|..|..+|..|...+. +++++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999987 899999875
No 333
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.10 E-value=0.019 Score=44.39 Aligned_cols=40 Identities=20% Similarity=0.222 Sum_probs=33.4
Q ss_pred CCCCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 180 NGKPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 180 ~~~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+....+++|+|+|+|..|..++..|...|.+|+++.|++
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3456678899999999999999999999999999998876
No 334
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=95.06 E-value=0.026 Score=46.09 Aligned_cols=35 Identities=17% Similarity=0.327 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|.|||+|..|.+.|..|.+.|++|+++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998764
No 335
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=95.02 E-value=0.02 Score=54.13 Aligned_cols=35 Identities=23% Similarity=0.451 Sum_probs=33.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|+|||+|.+|+.+|..|++.+.+|++|+|.+.
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 46899999999999999999999999999999985
No 336
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=95.02 E-value=0.019 Score=49.60 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+++|.|||+|..|...|..|+ .|++|+++|+++
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 578999999999999999999 999999999876
No 337
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=94.97 E-value=0.025 Score=48.46 Aligned_cols=33 Identities=18% Similarity=0.111 Sum_probs=30.9
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
+|+|||+|..|...|..|.+.|++|+++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998764
No 338
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.93 E-value=0.025 Score=49.46 Aligned_cols=33 Identities=18% Similarity=0.363 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|.+.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 579999999999999999999999999999875
No 339
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.91 E-value=0.02 Score=47.28 Aligned_cols=38 Identities=24% Similarity=0.329 Sum_probs=34.0
Q ss_pred CCCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 182 KPYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 182 ~~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.++.+++|+|||+|.+|...+..|.+.|.+|+++.+..
T Consensus 27 l~L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~ 64 (223)
T 3dfz_A 27 LDLKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTV 64 (223)
T ss_dssp ECCTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSC
T ss_pred EEcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35678999999999999999999999999999987653
No 340
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=94.89 E-value=0.027 Score=48.98 Aligned_cols=35 Identities=23% Similarity=0.231 Sum_probs=32.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|.|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999998864
No 341
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=94.84 E-value=0.028 Score=49.07 Aligned_cols=34 Identities=15% Similarity=0.300 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||+|..|..+|..|++.|+ +|+++|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 3589999999999999999999998 999999875
No 342
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.82 E-value=0.026 Score=52.26 Aligned_cols=34 Identities=26% Similarity=0.538 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999865
No 343
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=94.79 E-value=0.033 Score=46.65 Aligned_cols=35 Identities=26% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|.|||+|..|.++|..|.+.|++|+++++++.
T Consensus 19 ~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 19 GMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 57899999999999999999999999999998763
No 344
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=94.78 E-value=0.029 Score=48.96 Aligned_cols=34 Identities=21% Similarity=0.319 Sum_probs=31.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
..+|+|||+|..|...|..|.+.|. +|+++|++.
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999998 999999875
No 345
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=94.77 E-value=0.015 Score=44.41 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|..|..++..|.+.|.++++++++.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4689999999999999999999999999999875
No 346
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=94.74 E-value=0.037 Score=50.78 Aligned_cols=34 Identities=32% Similarity=0.545 Sum_probs=31.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.+|+|||+|..|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 5799999999999999999999999999998863
No 347
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=94.72 E-value=0.017 Score=52.77 Aligned_cols=34 Identities=24% Similarity=0.468 Sum_probs=31.6
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 22 ~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 22 KKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp -CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 4689999999999999999999999999999876
No 348
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=94.68 E-value=0.019 Score=51.55 Aligned_cols=32 Identities=28% Similarity=0.471 Sum_probs=30.7
Q ss_pred eEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 188 ~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+|+|||+|.+|.-+|..|++.|.+|+++.|++
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~ 34 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYERNS 34 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 79999999999999999999999999999976
No 349
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.67 E-value=0.026 Score=48.09 Aligned_cols=35 Identities=14% Similarity=0.289 Sum_probs=32.1
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+.|+|||+|-.|...+..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999764
No 350
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.66 E-value=0.031 Score=51.42 Aligned_cols=33 Identities=21% Similarity=0.501 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
++|+|||+|..|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999875
No 351
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=94.63 E-value=0.029 Score=48.86 Aligned_cols=33 Identities=30% Similarity=0.385 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
++|+|||+|..|.+.|..|.+.|.+|++++|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 479999999999999999999999999999875
No 352
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=94.63 E-value=0.035 Score=50.90 Aligned_cols=35 Identities=29% Similarity=0.527 Sum_probs=32.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+++|||.|..|+.+|..|++.|++|+++|+++.
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 36899999999999999999999999999999874
No 353
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=94.61 E-value=0.033 Score=50.41 Aligned_cols=35 Identities=20% Similarity=0.296 Sum_probs=32.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|+|||+|..|+.++..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~ 206 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPE 206 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999998763
No 354
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=94.57 E-value=0.02 Score=50.02 Aligned_cols=33 Identities=21% Similarity=0.380 Sum_probs=31.1
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCcEEEEECCC
Confidence 479999999999999999999999999999986
No 355
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=94.54 E-value=0.044 Score=44.88 Aligned_cols=34 Identities=21% Similarity=0.188 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|..|...|..|.+.|++|++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4679999999999999999999999999999875
No 356
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=94.53 E-value=0.025 Score=48.52 Aligned_cols=33 Identities=24% Similarity=0.593 Sum_probs=30.9
Q ss_pred CeEEEECcCCCHHHHHHHHhhc-cCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~-~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+.+|..|++. |.+|+++.+.+
T Consensus 40 ~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~ 73 (284)
T 1rp0_A 40 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV 73 (284)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred cCEEEECccHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 4799999999999999999997 99999999986
No 357
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.52 E-value=0.04 Score=48.50 Aligned_cols=32 Identities=31% Similarity=0.396 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERE 39 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~ 39 (325)
.+|+|||+|..|...|..|.+.|.+|+++++.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 57999999999999999999999999999985
No 358
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.51 E-value=0.035 Score=48.05 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|.+.|++|+++++++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 479999999999999999999999999999865
No 359
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=94.49 E-value=0.037 Score=49.42 Aligned_cols=35 Identities=17% Similarity=0.362 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
...+|+|+|||.+|+.+|..|...|. +|+++|++.
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~G 222 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKFG 222 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECCC
Confidence 34689999999999999999999999 999999984
No 360
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=94.49 E-value=0.021 Score=50.82 Aligned_cols=32 Identities=38% Similarity=0.501 Sum_probs=30.6
Q ss_pred eEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 188 ~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.|+|||+|.+|.-+|..|++.|.+|+++.|++
T Consensus 6 DViIVGaGpaGl~~A~~La~~G~~V~v~Er~~ 37 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 59999999999999999999999999999976
No 361
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=94.49 E-value=0.036 Score=47.59 Aligned_cols=34 Identities=24% Similarity=0.208 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
++|.|||+|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 4799999999999999999999999999998864
No 362
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=94.49 E-value=0.044 Score=48.72 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|.-|.+.|..|++.|++|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999875
No 363
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=94.48 E-value=0.029 Score=47.83 Aligned_cols=37 Identities=24% Similarity=0.399 Sum_probs=33.5
Q ss_pred CCCCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 183 PYGGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 183 ~~~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
++++++|+|||+|.+|...+..|.+.|.+|+++....
T Consensus 10 ~l~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 10 QLKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp CCTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EcCCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4578999999999999999999999999999987654
No 364
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=94.44 E-value=0.036 Score=48.48 Aligned_cols=34 Identities=21% Similarity=0.354 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|.|||+|..|..+|..|.+.|++|+++|+++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4589999999999999999999999999999875
No 365
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=94.43 E-value=0.037 Score=47.72 Aligned_cols=33 Identities=21% Similarity=0.310 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|.+.|..|.+.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999874
No 366
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=94.43 E-value=0.042 Score=49.38 Aligned_cols=35 Identities=17% Similarity=0.248 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..+|+|||+|..|+.++..+...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999998763
No 367
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=94.40 E-value=0.036 Score=51.23 Aligned_cols=35 Identities=14% Similarity=0.201 Sum_probs=32.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhc-CC-CeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQ-SI-PYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~-g~-~v~v~e~~~~ 41 (325)
..+|+|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 46899999999999999999999 99 9999999875
No 368
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=94.37 E-value=0.03 Score=50.52 Aligned_cols=35 Identities=20% Similarity=0.377 Sum_probs=32.2
Q ss_pred CCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 185 ~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+..+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~ 56 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVK 56 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 45689999999999999999999999999999987
No 369
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=94.34 E-value=0.031 Score=52.11 Aligned_cols=36 Identities=33% Similarity=0.466 Sum_probs=33.1
Q ss_pred CCCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 185 ~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
...+|+|||+|.+|+.+|..|++.|.+|+++.+.+.
T Consensus 91 ~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~ 126 (497)
T 2bry_A 91 TNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIK 126 (497)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSS
T ss_pred CCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccc
Confidence 457899999999999999999999999999999863
No 370
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=94.33 E-value=0.049 Score=48.41 Aligned_cols=34 Identities=15% Similarity=0.267 Sum_probs=31.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
++|+|||||..|..+++.+.+.|++++++|.++.
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~ 35 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQ 35 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCC
Confidence 5799999999999999999999999999998764
No 371
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.31 E-value=0.048 Score=49.74 Aligned_cols=34 Identities=18% Similarity=0.191 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||.|..||.+|..|++.|++|+.||.++
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999875
No 372
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=94.27 E-value=0.049 Score=47.81 Aligned_cols=35 Identities=17% Similarity=0.279 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~ 41 (325)
+.+|+|||||..|..+|..|+..|+ +|+++|.+..
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~~ 49 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIEG 49 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSTT
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 3589999999999999999999998 9999998763
No 373
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=94.27 E-value=0.044 Score=48.82 Aligned_cols=35 Identities=23% Similarity=0.378 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
...+|+|+|||.+|..+|+.|...|. +++++|++.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~G 226 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKG 226 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCC
Confidence 35689999999999999999999998 799999983
No 374
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=94.26 E-value=0.052 Score=47.52 Aligned_cols=33 Identities=18% Similarity=0.403 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
.+|+|||||..|..+|..|+..|+ +++++|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 589999999999999999999998 899999875
No 375
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=94.25 E-value=0.054 Score=46.81 Aligned_cols=41 Identities=17% Similarity=0.239 Sum_probs=32.4
Q ss_pred CCCCCCCCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 1 MKEQAAGVEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 1 M~~~~~~~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
|.....+++|+|.|| |..|..++..|.+.|++|++++|...
T Consensus 1 M~~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 1 MQRNTLKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp ------CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCcccCCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 544344578999999 99999999999999999999998764
No 376
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.21 E-value=0.045 Score=48.39 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|.+.|++|+++++++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999874
No 377
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=94.20 E-value=0.024 Score=52.28 Aligned_cols=34 Identities=24% Similarity=0.420 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.++|+|+|+|-.|..+|..|...|++|+++|+++
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999875
No 378
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.13 E-value=0.049 Score=47.89 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|.|||+|..|..+|..|.+.|++|++++|++
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 3689999999999999999999999999999864
No 379
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=94.13 E-value=0.039 Score=47.37 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.+|.|||.|..|..+|..|.+.|++|+++|+++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 3699999999999999999999999999998864
No 380
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.10 E-value=0.054 Score=49.95 Aligned_cols=33 Identities=27% Similarity=0.338 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 579999999999999999999999999999876
No 381
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=94.09 E-value=0.043 Score=46.44 Aligned_cols=34 Identities=18% Similarity=0.334 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCC-eEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIP-YVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~-v~v~e~~~ 40 (325)
..+|.|||+|..|...|..|.+.|++ |.++++++
T Consensus 10 ~m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 10 DTPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 46899999999999999999999998 89999875
No 382
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=94.04 E-value=0.049 Score=49.46 Aligned_cols=34 Identities=29% Similarity=0.490 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+..|+|||.|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999875
No 383
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.03 E-value=0.057 Score=47.34 Aligned_cols=34 Identities=12% Similarity=0.049 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHH-HHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLA-TAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~-~a~~L~~~g~~v~v~e~~~ 40 (325)
.++|.|||.|.+|++ +|..|.++|++|++.|+++
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 358999999999996 7888999999999999876
No 384
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=93.97 E-value=0.044 Score=49.33 Aligned_cols=34 Identities=29% Similarity=0.457 Sum_probs=32.0
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~ 59 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDN 59 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 4689999999999999999999999999999986
No 385
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=93.94 E-value=0.039 Score=49.62 Aligned_cols=35 Identities=31% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++.|.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCC
Confidence 46899999999999999999999999999999874
No 386
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=93.92 E-value=0.064 Score=47.73 Aligned_cols=34 Identities=18% Similarity=0.202 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|+|+|..|+.++..|...|.+|+++|+++
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999886
No 387
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=93.90 E-value=0.036 Score=49.81 Aligned_cols=38 Identities=29% Similarity=0.346 Sum_probs=33.0
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecCCeeec
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPVHVLS 224 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~~~~p 224 (325)
++|+|||+|..|+++|..+++.|.+|+++.+++...-|
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp 39 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTP 39 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCc
Confidence 47999999999999999999999999999988743333
No 388
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=93.88 E-value=0.046 Score=50.04 Aligned_cols=32 Identities=22% Similarity=0.398 Sum_probs=30.3
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+|||+|..|+.+|..|++.|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 389
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=93.87 E-value=0.073 Score=46.25 Aligned_cols=34 Identities=15% Similarity=0.151 Sum_probs=31.4
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.+|.|||+|..|...|..|.+.|++|+++|+++.
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~ 64 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAE 64 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGG
T ss_pred CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHH
Confidence 6799999999999999999999999999998753
No 390
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=93.85 E-value=0.036 Score=48.13 Aligned_cols=31 Identities=23% Similarity=0.380 Sum_probs=29.3
Q ss_pred CeEEEECCChHHHHHHHHHHhc-----C-CCeEEEec
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ-----S-IPYVILER 38 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~-----g-~~v~v~e~ 38 (325)
.+|+|||+|..|...|..|.+. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 5899999999999999999999 9 99999988
No 391
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=93.85 E-value=0.058 Score=46.78 Aligned_cols=32 Identities=31% Similarity=0.497 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
+|+|||+|..|...|..|+..|+ +++++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999875
No 392
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=93.85 E-value=0.037 Score=50.13 Aligned_cols=33 Identities=24% Similarity=0.337 Sum_probs=30.5
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSA 33 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999863
No 393
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=93.84 E-value=0.055 Score=45.49 Aligned_cols=34 Identities=24% Similarity=0.430 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||+|-.|..+|..|.+.|+ +++|+|+..
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 3589999999999999999999998 899999875
No 394
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=93.83 E-value=0.04 Score=49.19 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=32.3
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
..+|+|||+|.+|+.+|..|++.|.+|+++.|.+.
T Consensus 11 ~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~ 45 (379)
T 3alj_A 11 TRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSE 45 (379)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC
Confidence 46899999999999999999999999999999863
No 395
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=93.79 E-value=0.027 Score=46.70 Aligned_cols=35 Identities=26% Similarity=0.327 Sum_probs=30.6
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
....|+|+|+|..|..+|..|.+.|+ |+++|+++.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~ 42 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLRELRGSEV-FVLAEDENV 42 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGG
T ss_pred CCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHH
Confidence 34689999999999999999999999 999998763
No 396
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.77 E-value=0.052 Score=50.37 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~ 40 (325)
.+|+|||+|..|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999998 78999999865
No 397
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.74 E-value=0.065 Score=47.61 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|.|||.|..|..+|..|.+.|++|+++|+++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999875
No 398
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=93.72 E-value=0.056 Score=46.68 Aligned_cols=33 Identities=15% Similarity=0.232 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|...|..|.+.|++|+++|+++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 589999999999999999999999999999875
No 399
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=93.66 E-value=0.036 Score=49.34 Aligned_cols=33 Identities=30% Similarity=0.393 Sum_probs=31.0
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 18 ~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~ 50 (382)
T 1ryi_A 18 YEAVVIGGGIIGSAIAYYLAKENKNTALFESGT 50 (382)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 589999999999999999999999999999874
No 400
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.65 E-value=0.077 Score=46.24 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||+|..|..+|..|+..|+ +++++|.++
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 4589999999999999999999999 999999873
No 401
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=93.63 E-value=0.04 Score=49.88 Aligned_cols=33 Identities=24% Similarity=0.420 Sum_probs=30.5
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
++|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~ 33 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLP 33 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCC
Confidence 379999999999999999999999999999864
No 402
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=93.61 E-value=0.07 Score=49.43 Aligned_cols=33 Identities=18% Similarity=0.300 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999886
No 403
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=93.57 E-value=0.048 Score=48.94 Aligned_cols=33 Identities=27% Similarity=0.481 Sum_probs=30.9
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~ 37 (397)
T 2oln_A 5 YDVVVVGGGPVGLATAWQVAERGHRVLVLERHT 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 379999999999999999999999999999875
No 404
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=93.57 E-value=0.08 Score=47.40 Aligned_cols=34 Identities=24% Similarity=0.370 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|..|..+|..+...|.+|+++|+++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 5689999999999999999999999999999876
No 405
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=93.56 E-value=0.04 Score=50.09 Aligned_cols=34 Identities=18% Similarity=0.479 Sum_probs=31.4
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~ 60 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHAR 60 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 3579999999999999999999999999999987
No 406
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=93.55 E-value=0.081 Score=47.21 Aligned_cols=34 Identities=24% Similarity=0.311 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
...|+|+|+|..|..+|..|...|.+|+++|+++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999876
No 407
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=93.53 E-value=0.08 Score=42.97 Aligned_cols=32 Identities=25% Similarity=0.314 Sum_probs=30.0
Q ss_pred eEEEEC-CChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIG-aG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+||| +|..|...|..|.+.|++|++++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999875
No 408
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=93.51 E-value=0.062 Score=46.75 Aligned_cols=33 Identities=15% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERE 39 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~ 39 (325)
..+|.|||.|..|..+|..|.+.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999996
No 409
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=93.50 E-value=0.06 Score=49.73 Aligned_cols=33 Identities=18% Similarity=0.341 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHhc--CCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~ 40 (325)
.+|+|||+|..|+.+|..|++. |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 5899999999999999999999 79999999875
No 410
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=93.49 E-value=0.043 Score=50.92 Aligned_cols=34 Identities=29% Similarity=0.467 Sum_probs=31.4
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.++|+|||+|.+|+.+|..|++.|.+|+++.+++
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~ 66 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE 66 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCC
Confidence 5789999999999999999999999999998764
No 411
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=93.47 E-value=0.078 Score=46.42 Aligned_cols=34 Identities=29% Similarity=0.378 Sum_probs=30.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
..+|+|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~~ 40 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVNK 40 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecch
Confidence 4689999999999999999999987 899999864
No 412
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=93.47 E-value=0.053 Score=46.87 Aligned_cols=34 Identities=21% Similarity=0.305 Sum_probs=28.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.+|.+||-|..|..+|.+|.+.|++|+++|+++.
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTAS 39 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC-----
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 4799999999999999999999999999998764
No 413
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=93.45 E-value=0.076 Score=46.08 Aligned_cols=32 Identities=25% Similarity=0.411 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|. .|.+|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 57999999999999999999 999999999875
No 414
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=93.44 E-value=0.046 Score=48.20 Aligned_cols=33 Identities=24% Similarity=0.378 Sum_probs=31.0
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHEVLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999974
No 415
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=93.43 E-value=0.072 Score=46.15 Aligned_cols=34 Identities=26% Similarity=0.457 Sum_probs=30.3
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
..+|+|||||..|...|..|+..|+ +++++|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 4689999999999999999999998 899999875
No 416
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=93.42 E-value=0.063 Score=46.83 Aligned_cols=33 Identities=12% Similarity=0.173 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~ 40 (325)
.+|.|||+|..|..+|..|.+.| ++|+++|+++
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999885
No 417
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=93.42 E-value=0.095 Score=44.85 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.9
Q ss_pred CeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+ |..|...|..|.+.|++|+++++++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999875
No 418
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=93.41 E-value=0.078 Score=46.25 Aligned_cols=33 Identities=21% Similarity=0.398 Sum_probs=29.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+|+|||+|..|.+.|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 654
No 419
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=93.38 E-value=0.092 Score=44.59 Aligned_cols=35 Identities=29% Similarity=0.343 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++++|||+|-+|-+++..|.+.|.+++|+.|+..
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999988763
No 420
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=93.37 E-value=0.047 Score=48.79 Aligned_cols=34 Identities=24% Similarity=0.400 Sum_probs=31.2
Q ss_pred CeEEEECcCCCHHHHHHHHhhc--cCeEEEEEecCC
Q 020533 187 KNVLVVGSGNSGMEIALDLANH--AAKTSLVVRSPV 220 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~--~~~v~~~~r~~~ 220 (325)
++|+|||+|.+|+-+|..|++. |.+|+++.|.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~ 36 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDE 36 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCC
Confidence 3799999999999999999999 999999999763
No 421
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=93.35 E-value=0.066 Score=48.42 Aligned_cols=31 Identities=26% Similarity=0.372 Sum_probs=29.2
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+|||+|..|+.+|..|++ |++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999875
No 422
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=93.30 E-value=0.092 Score=44.67 Aligned_cols=34 Identities=21% Similarity=0.317 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+.++|+|+|-.|.++|..|.+.|.+|++++|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4689999999999999999999999999998875
No 423
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=93.30 E-value=0.11 Score=46.52 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=32.4
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..++|+|||+|..|..++..+.+.|++++++|..+.
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKN 48 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC
Confidence 346899999999999999999999999999997654
No 424
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.29 E-value=0.086 Score=44.83 Aligned_cols=35 Identities=14% Similarity=0.101 Sum_probs=32.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
.++|+|.|||..|..++..|.++|++|+++.|++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 35899999999999999999999999999998763
No 425
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=93.29 E-value=0.068 Score=46.76 Aligned_cols=30 Identities=27% Similarity=0.199 Sum_probs=29.0
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEec
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILER 38 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~ 38 (325)
+|+|||+|..|...|..|.+.|++|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 426
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=93.29 E-value=0.072 Score=45.87 Aligned_cols=34 Identities=15% Similarity=0.263 Sum_probs=31.2
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+.+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 3589999999999999999999999999999865
No 427
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=93.28 E-value=0.051 Score=49.11 Aligned_cols=33 Identities=27% Similarity=0.392 Sum_probs=31.1
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 479999999999999999999999999999985
No 428
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.25 E-value=0.051 Score=48.80 Aligned_cols=34 Identities=24% Similarity=0.343 Sum_probs=31.6
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecCC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSPV 220 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~~ 220 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.|++.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~ 40 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARR 40 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCC
Confidence 4799999999999999999999999999999863
No 429
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=93.24 E-value=0.052 Score=44.64 Aligned_cols=33 Identities=30% Similarity=0.433 Sum_probs=30.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEE-EecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVI-LEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v-~e~~~ 40 (325)
.+|.|||+|..|.+.|..|.+.|++|++ +++++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999998 77765
No 430
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.20 E-value=0.081 Score=49.01 Aligned_cols=34 Identities=18% Similarity=0.219 Sum_probs=31.6
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+++|.|||+|..|..+|..|.+.|++|++++|++
T Consensus 15 ~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 15 KQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 4579999999999999999999999999999875
No 431
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.19 E-value=0.12 Score=43.94 Aligned_cols=34 Identities=26% Similarity=0.344 Sum_probs=31.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
++|+|.|+|..|..++..|.+.|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 4799999999999999999999999999998754
No 432
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=93.19 E-value=0.12 Score=46.93 Aligned_cols=35 Identities=20% Similarity=0.229 Sum_probs=31.8
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..++|+|||+|..|..++..+.+.|++++++|..+
T Consensus 34 ~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~ 68 (419)
T 4e4t_A 34 PGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDP 68 (419)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCC
Confidence 35689999999999999999999999999998765
No 433
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=93.19 E-value=0.093 Score=48.54 Aligned_cols=34 Identities=9% Similarity=0.178 Sum_probs=31.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+.+|.|||.|..|..+|..|.+.|++|+++|+++
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999886
No 434
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=93.12 E-value=0.088 Score=45.20 Aligned_cols=32 Identities=25% Similarity=0.311 Sum_probs=30.2
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|.|||+|..|...|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 59999999999999999999999999999875
No 435
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=93.12 E-value=0.11 Score=45.18 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=31.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
.+|.|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 589999999999999999999999 899999876
No 436
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.11 E-value=0.093 Score=45.61 Aligned_cols=32 Identities=28% Similarity=0.436 Sum_probs=29.3
Q ss_pred eEEEECCChHHHHHHHHHHhc--CCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQ--SIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~--g~~v~v~e~~~ 40 (325)
+|+|||+|..|..+|..|++. +.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 78999999876
No 437
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.11 E-value=0.1 Score=44.98 Aligned_cols=33 Identities=33% Similarity=0.506 Sum_probs=30.9
Q ss_pred CeEEEEC-CChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVG-AGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIG-aG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.||| +|..|.+.|..|.+.|++|+++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999875
No 438
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=93.10 E-value=0.1 Score=45.50 Aligned_cols=39 Identities=31% Similarity=0.527 Sum_probs=32.3
Q ss_pred CCCCCCCCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 1 MKEQAAGVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 1 M~~~~~~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
|+++ ...+|+|||+|..|.+.|..|...+. +++++|.+.
T Consensus 1 m~~~-~~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 1 MKNN-GGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp CTTT-TSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCCC-CCCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 5543 24689999999999999999988876 799998875
No 439
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=93.09 E-value=0.055 Score=48.34 Aligned_cols=33 Identities=36% Similarity=0.465 Sum_probs=31.1
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 379999999999999999999999999999987
No 440
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=93.08 E-value=0.1 Score=45.13 Aligned_cols=34 Identities=18% Similarity=0.245 Sum_probs=31.1
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
.++++|||+|..|.++|..|.+.|. +|+|++|+.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4689999999999999999999998 899998875
No 441
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=93.07 E-value=0.057 Score=48.14 Aligned_cols=33 Identities=39% Similarity=0.508 Sum_probs=30.7
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 4 ~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~ 36 (389)
T 2gf3_A 4 FDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD 36 (389)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 479999999999999999999999999999875
No 442
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=93.07 E-value=0.043 Score=48.63 Aligned_cols=33 Identities=12% Similarity=0.230 Sum_probs=30.7
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 3 ~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~ 35 (372)
T 2uzz_A 3 YDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHM 35 (372)
T ss_dssp EEEEESCTTHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEecCC
Confidence 369999999999999999999999999999875
No 443
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=93.05 E-value=0.14 Score=45.71 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=32.7
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
..++|+|||+|..|..++..+.+.|++++++|..+.
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSED 46 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 356899999999999999999999999999998754
No 444
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=93.03 E-value=0.049 Score=48.80 Aligned_cols=33 Identities=21% Similarity=0.402 Sum_probs=31.1
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.|.+
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 369999999999999999999999999999987
No 445
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=93.02 E-value=0.063 Score=48.47 Aligned_cols=34 Identities=26% Similarity=0.437 Sum_probs=31.7
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCe-EEEEEecCC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAK-TSLVVRSPV 220 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~-v~~~~r~~~ 220 (325)
.+|+|||+|.+|+-+|..|++.|.+ |+++.|.+.
T Consensus 5 ~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~ 39 (410)
T 3c96_A 5 IDILIAGAGIGGLSCALALHQAGIGKVTLLESSSE 39 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCC
Confidence 4799999999999999999999999 999999873
No 446
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=93.00 E-value=0.084 Score=46.10 Aligned_cols=32 Identities=25% Similarity=0.473 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
+|+|||+|..|.++|..|.+.|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999998 899999875
No 447
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=92.98 E-value=0.1 Score=44.42 Aligned_cols=32 Identities=22% Similarity=0.257 Sum_probs=30.0
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|.|||+|..|.+.|..|.+.|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999875
No 448
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=92.98 E-value=0.11 Score=44.60 Aligned_cols=35 Identities=23% Similarity=0.359 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..++|.|||+|..|..+|..|...|.+|+++++..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 35689999999999999999999999999999875
No 449
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=92.98 E-value=0.12 Score=44.82 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=31.5
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 7 GVEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
+++|+|+|| |..|..++..|.+.|++|+++.|++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~ 46 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNS 46 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTC
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCC
Confidence 357999997 99999999999999999999998864
No 450
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=92.95 E-value=0.11 Score=45.32 Aligned_cols=35 Identities=17% Similarity=0.316 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~ 41 (325)
..+|+|||+|..|.++|..|+..|+ +++++|.++.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~~ 42 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAEG 42 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCch
Confidence 3589999999999999999999998 9999998763
No 451
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=92.94 E-value=0.11 Score=44.77 Aligned_cols=35 Identities=20% Similarity=0.356 Sum_probs=32.0
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
...+|.|||+|..|..+|..|...|.+|+++|++.
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 35689999999999999999999999999999875
No 452
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.93 E-value=0.1 Score=45.55 Aligned_cols=34 Identities=35% Similarity=0.557 Sum_probs=30.0
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
+.+|+|||+|..|..+|..|...+. +++++|.+.
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~ 41 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDT 41 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 3689999999999999999998885 799998764
No 453
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.93 E-value=0.17 Score=47.04 Aligned_cols=45 Identities=22% Similarity=0.223 Sum_probs=30.7
Q ss_pred HHHcCCCceeeeCeEEEEEEEcCCCCcEEEEEeecCCCCceeEEEEEeCeEEEcccC
Q 020533 91 VSHFNIGPSIRYQRSVESASYDEATNMWNVKASNLLSPGREIEEYYSGRFLVVASGE 147 (325)
Q Consensus 91 a~~~~l~~~i~~~~~V~~i~~~~~~~~~~v~~~~~~~~~~~~~~~~~ad~vIiAtG~ 147 (325)
+++.|+.. +++++|.+++.++ +...+.+.++ .+ +.+|.||+|+|.
T Consensus 267 l~~~GV~v--~~~~~v~~i~~~~--~v~~v~~~~g-------~~-i~aD~Vv~a~G~ 311 (493)
T 1y56_A 267 LERWGIDY--VHIPNVKRVEGNE--KVERVIDMNN-------HE-YKVDALIFADGR 311 (493)
T ss_dssp HHHHTCEE--EECSSEEEEECSS--SCCEEEETTC-------CE-EECSEEEECCCE
T ss_pred HHhCCcEE--EeCCeeEEEecCC--ceEEEEeCCC-------eE-EEeCEEEECCCc
Confidence 44567554 8888898887542 3344554432 56 899999999994
No 454
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=92.92 E-value=0.059 Score=49.59 Aligned_cols=33 Identities=33% Similarity=0.519 Sum_probs=30.4
Q ss_pred CeEEEECcCCCHHHHHHHHhhccC--eEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAA--KTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~--~v~~~~r~~ 219 (325)
++|+|||+|.+|+-+|..|++.|. +|+++++++
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~ 37 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSE 37 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCC
Confidence 589999999999999999999998 999998753
No 455
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=92.92 E-value=0.11 Score=45.12 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=30.1
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
.+|+|||||..|...|..|+..|. +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999986 899999875
No 456
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.90 E-value=0.073 Score=47.08 Aligned_cols=33 Identities=36% Similarity=0.494 Sum_probs=30.6
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 7 ~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 7 KRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 579999999999999999999999999999863
No 457
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.90 E-value=0.13 Score=41.07 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=31.2
Q ss_pred CeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCCC
Q 020533 8 VEVIMVGA-GTSGLATAACLSLQSIPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~~ 41 (325)
++|+|+|| |..|..++..|.++|.+|++++|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 57999999 99999999999999999999998753
No 458
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=92.88 E-value=0.049 Score=47.79 Aligned_cols=33 Identities=24% Similarity=0.252 Sum_probs=30.3
Q ss_pred CeEEEECcCCCHHHHHHHHhh---ccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLAN---HAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~---~~~~v~~~~r~~ 219 (325)
++|+|||+|.+|+-+|..|++ .|.+|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCC
Confidence 379999999999999999999 888999999874
No 459
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=92.87 E-value=0.1 Score=40.03 Aligned_cols=34 Identities=15% Similarity=0.330 Sum_probs=31.4
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.++++|+|+|..|..++..|.+.|.+|+++.+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 4689999999999999999999999999999875
No 460
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=92.86 E-value=0.057 Score=48.97 Aligned_cols=32 Identities=38% Similarity=0.531 Sum_probs=29.9
Q ss_pred eEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 188 NVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 188 ~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 3 dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~ 34 (431)
T 3k7m_X 3 DAIVVGGGFSGLKAARDLTNAGKKVLLLEGGE 34 (431)
T ss_dssp EEEEECCBHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECCcHHHHHHHHHHHHcCCeEEEEecCC
Confidence 69999999999999999999999999999854
No 461
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=92.84 E-value=0.11 Score=48.24 Aligned_cols=33 Identities=9% Similarity=0.116 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|..+|..|.++|++|+++++++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 579999999999999999999999999999876
No 462
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=92.79 E-value=0.058 Score=48.74 Aligned_cols=33 Identities=18% Similarity=0.360 Sum_probs=31.0
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..+++.|.+|+++.+.+
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~ 37 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGK 37 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 369999999999999999999999999999986
No 463
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.78 E-value=0.064 Score=47.74 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=30.3
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+|||+|..|...|..|.+.|++|+++++++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999865
No 464
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=92.77 E-value=0.068 Score=49.60 Aligned_cols=33 Identities=27% Similarity=0.393 Sum_probs=29.2
Q ss_pred CeEEEECcCCCHHHHHHHHhhc-cCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANH-AAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~-~~~v~~~~r~~ 219 (325)
-+|+|||+|.+|+-+|..|++. |.+|+++++++
T Consensus 11 ~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~ 44 (513)
T 4gde_A 11 VDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNE 44 (513)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSS
T ss_pred CCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCC
Confidence 4799999999999999999975 88999998764
No 465
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.76 E-value=0.059 Score=47.95 Aligned_cols=33 Identities=24% Similarity=0.508 Sum_probs=30.7
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+..
T Consensus 6 ~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~ 38 (382)
T 1y56_B 6 SEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF 38 (382)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 479999999999999999999999999999874
No 466
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=92.75 E-value=0.13 Score=41.60 Aligned_cols=32 Identities=16% Similarity=0.214 Sum_probs=30.0
Q ss_pred eEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|+|+|| |..|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 6999996 9999999999999999999999875
No 467
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=92.74 E-value=0.1 Score=43.99 Aligned_cols=32 Identities=28% Similarity=0.317 Sum_probs=29.9
Q ss_pred eEEEECCChHHHHHHHHHHhcC-CCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQS-IPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g-~~v~v~e~~~ 40 (325)
+|.|||+|..|...|..|.+.| .+|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 6999999999999999999999 8999999875
No 468
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=92.74 E-value=0.12 Score=48.02 Aligned_cols=33 Identities=9% Similarity=0.194 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|..+|..|.+.|++|+++++++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 469
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=92.71 E-value=0.07 Score=48.28 Aligned_cols=34 Identities=15% Similarity=0.433 Sum_probs=31.1
Q ss_pred CCeEEEECcCCCHHHHHHHHhhcc-CeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~-~~v~~~~r~~ 219 (325)
..+|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 6 ~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~ 40 (424)
T 2b9w_A 6 DSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTD 40 (424)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 468999999999999999999999 8999998864
No 470
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=92.65 E-value=0.12 Score=44.01 Aligned_cols=33 Identities=21% Similarity=0.214 Sum_probs=30.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
.+|.|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 379999999999999999999998 899999875
No 471
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=92.63 E-value=0.078 Score=47.43 Aligned_cols=34 Identities=21% Similarity=0.340 Sum_probs=31.9
Q ss_pred CCCeEEEECcCCCHHHHHHHHhhccCeEEEEEec
Q 020533 185 GGKNVLVVGSGNSGMEIALDLANHAAKTSLVVRS 218 (325)
Q Consensus 185 ~~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~ 218 (325)
...+|+|||+|.+|+-+|..|.+.|.+|+++.++
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~ 76 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTRAGHDVTILEAN 76 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSC
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCcEEEEecc
Confidence 4679999999999999999999999999999987
No 472
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=92.62 E-value=0.11 Score=44.45 Aligned_cols=31 Identities=26% Similarity=0.470 Sum_probs=29.2
Q ss_pred eEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 9 EVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 9 ~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
+|.|||+|..|...|..|.+ |++|+++++++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999875
No 473
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=92.62 E-value=0.088 Score=47.02 Aligned_cols=34 Identities=12% Similarity=0.236 Sum_probs=31.3
Q ss_pred CeEEEECCChHHHHHHHHHHhcC-------CCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS-------IPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g-------~~v~v~e~~~~ 41 (325)
.+|+|||+|..|.+.|..|.+.| .+|+++++++.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 47999999999999999999999 99999998765
No 474
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=92.62 E-value=0.079 Score=48.97 Aligned_cols=34 Identities=24% Similarity=0.448 Sum_probs=31.1
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 11 ~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~ 44 (489)
T 2jae_A 11 SHSVVVLGGGPAGLCSAFELQKAGYKVTVLEART 44 (489)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccC
Confidence 5689999999999999999999999999998764
No 475
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=92.60 E-value=0.13 Score=50.09 Aligned_cols=33 Identities=27% Similarity=0.475 Sum_probs=31.2
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|...|..|++.|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 579999999999999999999999999999886
No 476
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=92.60 E-value=0.13 Score=42.36 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=31.5
Q ss_pred CCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+.|+|.|| |..|..++..|.+.|++|++++|++
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 468999998 9999999999999999999999875
No 477
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=92.59 E-value=0.14 Score=42.83 Aligned_cols=33 Identities=15% Similarity=0.308 Sum_probs=30.7
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC----CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI----PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~----~v~v~e~~~ 40 (325)
.+|.|||+|..|...|..|.+.|+ +|.++|+++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999875
No 478
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=92.58 E-value=0.098 Score=44.52 Aligned_cols=34 Identities=21% Similarity=0.212 Sum_probs=31.4
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.++++|+|+|-+|.++|..|.+.|.+|+|++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999998875
No 479
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.58 E-value=0.12 Score=43.56 Aligned_cols=34 Identities=15% Similarity=0.144 Sum_probs=31.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcC----CCeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS----IPYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g----~~v~v~e~~~~ 41 (325)
.+|.|||+|..|...|..|.+.| .+|+++++++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 68999998865
No 480
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.57 E-value=0.14 Score=44.74 Aligned_cols=34 Identities=15% Similarity=0.323 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC--CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI--PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~--~v~v~e~~~ 40 (325)
..+|+|||+|..|..+|..|+..|+ +++++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4689999999999999999999998 899999865
No 481
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=92.56 E-value=0.15 Score=43.64 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC---CeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI---PYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~---~v~v~e~~~ 40 (325)
.+|.|||+|..|.+.|..|.+.|+ +|+++|+++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999998 899999876
No 482
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=92.50 E-value=0.13 Score=45.04 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=30.9
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||+|-.|..+|.+|+..|+ +++|+|...
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~ 68 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGT 68 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCB
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCE
Confidence 4689999999999999999999998 789998764
No 483
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=92.46 E-value=0.071 Score=47.79 Aligned_cols=33 Identities=24% Similarity=0.466 Sum_probs=30.8
Q ss_pred CeEEEECcCCCHHHHHHHHhh-cc-CeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLAN-HA-AKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~-~~-~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++ .| .+|+++.+.+
T Consensus 22 ~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~ 56 (405)
T 2gag_B 22 YDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW 56 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 579999999999999999999 89 8999999875
No 484
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=92.46 E-value=0.078 Score=46.64 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.3
Q ss_pred CeEEEECcCCCHHHHHHHHhhcc------CeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~------~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.| .+|+++.+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 37999999999999999999998 8999999875
No 485
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.45 E-value=0.13 Score=44.90 Aligned_cols=33 Identities=18% Similarity=0.204 Sum_probs=30.5
Q ss_pred CeEEEECCChHHHHHHHHHHhcC----CCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS----IPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g----~~v~v~e~~~ 40 (325)
.+|.|||+|..|..+|..|.+.| ++|+++++++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 57999999999999999999999 7999999875
No 486
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=92.45 E-value=0.11 Score=45.12 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=30.0
Q ss_pred CeEEEECCChHHHHHHHHHHhcC--CCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQS--IPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g--~~v~v~e~~~ 40 (325)
.+|+|||+|..|..+|..|.+.| .+++++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 47999999999999999999999 6899999875
No 487
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=92.42 E-value=0.13 Score=44.00 Aligned_cols=35 Identities=17% Similarity=0.199 Sum_probs=31.7
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~ 41 (325)
.++++|||+|-+|.+++..|.+.|. +++|+.|+..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~ 152 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTMS 152 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHH
Confidence 4689999999999999999999999 8999988763
No 488
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=92.41 E-value=0.12 Score=47.61 Aligned_cols=34 Identities=15% Similarity=0.120 Sum_probs=31.5
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.++|+|||+|..|...+..|.+.|.+|+|++++.
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 4689999999999999999999999999999854
No 489
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=92.40 E-value=0.11 Score=44.62 Aligned_cols=33 Identities=21% Similarity=0.315 Sum_probs=30.8
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|+|||+|..|...|..|.+.|++|.++|+++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999875
No 490
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=92.39 E-value=0.064 Score=49.21 Aligned_cols=33 Identities=33% Similarity=0.516 Sum_probs=31.1
Q ss_pred CeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|.+|+++.+.+
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~ 39 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKP 39 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 369999999999999999999999999999987
No 491
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=92.38 E-value=0.041 Score=45.63 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=30.9
Q ss_pred CCCeEEEECCChHHHHHHHHHHhcCCCeEEEecC
Q 020533 6 AGVEVIMVGAGTSGLATAACLSLQSIPYVILERE 39 (325)
Q Consensus 6 ~~~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~ 39 (325)
...+|.|||+|..|-++|..|.+.|++|+.+++.
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CCcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 3468999999999999999999999999999874
No 492
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=92.36 E-value=0.083 Score=38.09 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=30.8
Q ss_pred CCeEEEECcCCCHHHHHHHHhhcc-CeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHA-AKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~-~~v~~~~r~~ 219 (325)
+++|+|+|+|..|..++..|...| .+|+++.|++
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 578999999999999999999999 7899888875
No 493
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=92.36 E-value=0.15 Score=44.46 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=30.9
Q ss_pred CeEEEECCChHHHHHHHHHHhcCC-CeEEEecCCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSI-PYVILERENC 41 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~~ 41 (325)
.+|+|||+|..|.++|..|+..++ +++++|.++.
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~~ 40 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQG 40 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCChH
Confidence 589999999999999999999888 9999998763
No 494
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=92.35 E-value=0.069 Score=47.32 Aligned_cols=33 Identities=21% Similarity=0.369 Sum_probs=30.1
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
.++|+|||+|.+|+-+|..|+ .|.+|+++.+.+
T Consensus 9 ~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~ 41 (381)
T 3nyc_A 9 EADYLVIGAGIAGASTGYWLS-AHGRVVVLEREA 41 (381)
T ss_dssp ECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSS
T ss_pred cCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCC
Confidence 468999999999999999999 599999999874
No 495
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=92.28 E-value=0.086 Score=47.94 Aligned_cols=33 Identities=30% Similarity=0.512 Sum_probs=30.9
Q ss_pred CeEEEECcCCCHHHHHHHHhhccC-eEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHAA-KTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~~-~v~~~~r~~ 219 (325)
.+|+|||+|.+|+-+|..|++.|. +|+++.+.+
T Consensus 7 ~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~ 40 (438)
T 3dje_A 7 SSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYP 40 (438)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 479999999999999999999999 999999876
No 496
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=92.27 E-value=0.074 Score=48.98 Aligned_cols=34 Identities=38% Similarity=0.557 Sum_probs=30.9
Q ss_pred CCeEEEECcCCCHHHHHHHHhhccCeEEEEEecC
Q 020533 186 GKNVLVVGSGNSGMEIALDLANHAAKTSLVVRSP 219 (325)
Q Consensus 186 ~~~v~VvG~G~s~~e~a~~l~~~~~~v~~~~r~~ 219 (325)
..+|+|||+|.+|+-+|..|++.|.+|+++.+++
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~ 49 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSA 49 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCC
Confidence 5689999999999999999999999999998875
No 497
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=92.27 E-value=0.19 Score=43.66 Aligned_cols=35 Identities=20% Similarity=0.130 Sum_probs=31.6
Q ss_pred CCCeEEEECC-ChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 6 AGVEVIMVGA-GTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 6 ~~~~v~IIGa-G~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
..+.|+|.|| |..|..++..|.+.|++|++++|+.
T Consensus 10 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~ 45 (342)
T 1y1p_A 10 EGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSA 45 (342)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 4568999998 9999999999999999999998864
No 498
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=92.26 E-value=0.053 Score=49.64 Aligned_cols=33 Identities=30% Similarity=0.570 Sum_probs=30.7
Q ss_pred CeEEEECcCCCHHHHHHHHhhcc------CeEEEEEecC
Q 020533 187 KNVLVVGSGNSGMEIALDLANHA------AKTSLVVRSP 219 (325)
Q Consensus 187 ~~v~VvG~G~s~~e~a~~l~~~~------~~v~~~~r~~ 219 (325)
++|+|||+|.+|+-+|..|++.| .+|+++++++
T Consensus 6 ~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~ 44 (470)
T 3i6d_A 6 KHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASP 44 (470)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCC
Confidence 58999999999999999999999 8999999864
No 499
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=92.25 E-value=0.13 Score=43.20 Aligned_cols=34 Identities=21% Similarity=0.439 Sum_probs=30.8
Q ss_pred CCeEEEECCChHHHHHHHHHHhcCC-CeEEEecCC
Q 020533 7 GVEVIMVGAGTSGLATAACLSLQSI-PYVILEREN 40 (325)
Q Consensus 7 ~~~v~IIGaG~~Gl~~a~~L~~~g~-~v~v~e~~~ 40 (325)
..+|+|||+|-.|..+|..|.+.|+ +++|+|...
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~ 62 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDD 62 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCB
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 4689999999999999999999998 789998764
No 500
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=92.24 E-value=0.14 Score=43.07 Aligned_cols=33 Identities=15% Similarity=0.178 Sum_probs=30.6
Q ss_pred CeEEEECCChHHHHHHHHHHhcCCCeEEEecCC
Q 020533 8 VEVIMVGAGTSGLATAACLSLQSIPYVILEREN 40 (325)
Q Consensus 8 ~~v~IIGaG~~Gl~~a~~L~~~g~~v~v~e~~~ 40 (325)
.+|.|||+|..|...|..|.+.|.+|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 589999999999999999999999999999875
Done!