Query 020536
Match_columns 325
No_of_seqs 341 out of 2267
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 04:28:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020536.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/020536hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hdj_A Human HSP40, HDJ-1; mol 99.8 5.9E-21 2E-25 145.8 9.1 71 68-138 2-72 (77)
2 2ctp_A DNAJ homolog subfamily 99.8 6.6E-21 2.3E-25 145.9 8.3 70 67-136 5-74 (78)
3 2cug_A Mkiaa0962 protein; DNAJ 99.8 5.9E-21 2E-25 149.7 6.7 69 67-135 15-83 (88)
4 2ctr_A DNAJ homolog subfamily 99.8 1.1E-20 3.7E-25 148.2 7.2 71 67-137 5-75 (88)
5 2dn9_A DNAJ homolog subfamily 99.8 1.8E-20 6.2E-25 143.7 8.1 70 66-135 4-74 (79)
6 2ej7_A HCG3 gene; HCG3 protein 99.8 3.6E-20 1.2E-24 143.0 8.8 70 67-136 7-78 (82)
7 2och_A Hypothetical protein DN 99.8 3.4E-20 1.2E-24 140.3 8.1 69 65-135 4-72 (73)
8 1wjz_A 1700030A21RIK protein; 99.8 2E-20 6.7E-25 148.0 5.6 69 67-135 14-89 (94)
9 2dmx_A DNAJ homolog subfamily 99.8 7.1E-20 2.4E-24 144.5 8.3 73 67-139 7-81 (92)
10 2yua_A Williams-beuren syndrom 99.8 4.4E-20 1.5E-24 147.8 6.6 69 67-135 15-84 (99)
11 2ctq_A DNAJ homolog subfamily 99.8 7.4E-20 2.5E-24 149.7 7.5 70 67-136 18-88 (112)
12 2lgw_A DNAJ homolog subfamily 99.8 1.5E-19 5E-24 145.0 7.2 71 69-139 2-74 (99)
13 2o37_A Protein SIS1; HSP40, J- 99.8 2.2E-19 7.5E-24 141.9 7.5 71 65-137 4-74 (92)
14 2ctw_A DNAJ homolog subfamily 99.8 3E-19 1E-23 145.4 8.4 69 67-135 15-84 (109)
15 1bq0_A DNAJ, HSP40; chaperone, 99.8 1.3E-19 4.6E-24 145.9 5.7 72 68-139 2-74 (103)
16 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 3E-19 1E-23 145.2 6.3 71 65-135 11-86 (109)
17 2ys8_A RAB-related GTP-binding 99.7 1.3E-18 4.3E-23 137.1 5.7 66 64-129 22-87 (90)
18 2l6l_A DNAJ homolog subfamily 99.7 5.4E-18 1.9E-22 145.9 6.9 69 67-135 8-83 (155)
19 3apq_A DNAJ homolog subfamily 99.7 7.6E-18 2.6E-22 149.7 8.0 70 69-138 2-72 (210)
20 3hho_A CO-chaperone protein HS 99.7 3.6E-17 1.2E-21 143.7 6.8 69 67-135 2-78 (174)
21 1gh6_A Large T antigen; tumor 99.7 4E-18 1.4E-22 140.1 -0.0 64 69-135 8-73 (114)
22 3lz8_A Putative chaperone DNAJ 99.7 9E-18 3.1E-22 161.1 0.0 69 67-135 26-94 (329)
23 1fpo_A HSC20, chaperone protei 99.6 1.2E-16 4E-21 140.1 5.8 66 70-135 2-75 (171)
24 2pf4_E Small T antigen; PP2A, 99.6 1.8E-17 6.3E-22 145.3 0.4 64 69-135 11-76 (174)
25 3bvo_A CO-chaperone protein HS 99.6 9.9E-17 3.4E-21 144.6 4.9 69 67-135 41-117 (207)
26 1faf_A Large T antigen; J doma 99.6 6.6E-17 2.3E-21 124.4 3.1 60 69-131 11-72 (79)
27 1iur_A KIAA0730 protein; DNAJ 99.6 9.8E-17 3.4E-21 126.0 2.4 60 68-127 15-76 (88)
28 1n4c_A Auxilin; four helix bun 99.6 1.5E-16 5.2E-21 140.4 2.4 64 67-130 115-182 (182)
29 3uo3_A J-type CO-chaperone JAC 99.6 3.9E-16 1.3E-20 137.9 3.8 67 66-134 8-81 (181)
30 2qwo_B Putative tyrosine-prote 99.6 4.3E-16 1.5E-20 123.2 2.8 55 69-123 33-91 (92)
31 2guz_A Mitochondrial import in 99.6 5.8E-16 2E-20 116.6 2.3 56 69-127 14-70 (71)
32 3ag7_A Putative uncharacterize 99.6 7.2E-16 2.5E-20 125.0 2.5 60 65-125 37-104 (106)
33 3apo_A DNAJ homolog subfamily 99.5 2E-15 6.8E-20 158.1 0.9 74 66-139 18-92 (780)
34 2y4t_A DNAJ homolog subfamily 99.0 3.3E-10 1.1E-14 107.3 5.5 65 68-132 381-449 (450)
35 2guz_B Mitochondrial import in 98.8 3.1E-09 1E-13 78.6 4.7 52 70-124 5-59 (65)
36 2pzi_A Probable serine/threoni 87.7 0.33 1.1E-05 49.6 3.8 50 64-120 624-675 (681)
No 1
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.84 E-value=5.9e-21 Score=145.85 Aligned_cols=71 Identities=44% Similarity=0.584 Sum_probs=66.6
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcccCC
Q 020536 68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT 138 (325)
Q Consensus 68 ~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~ 138 (325)
..|||+||||+++++.++||+|||++++++|||+++.+.+.+.|+.|++||++|+||.+|..||+++..+.
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 72 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGL 72 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccc
Confidence 46999999999999999999999999999999999988899999999999999999999999999876443
No 2
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.83 E-value=6.6e-21 Score=145.90 Aligned_cols=70 Identities=44% Similarity=0.635 Sum_probs=66.3
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhccc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF 136 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~ 136 (325)
...|||+||||+++++.++||+|||++++++|||+++.+.+.+.|++|++||++|+||.+|..||+++..
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 5 SSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 4679999999999999999999999999999999999888999999999999999999999999998753
No 3
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.83 E-value=5.9e-21 Score=149.67 Aligned_cols=69 Identities=49% Similarity=0.718 Sum_probs=65.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++++.++||+|||++++++|||+++.+.+++.|++|++||++|+||.+|..||.++.
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 83 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGS 83 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCC
Confidence 467999999999999999999999999999999999988899999999999999999999999999865
No 4
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=1.1e-20 Score=148.16 Aligned_cols=71 Identities=39% Similarity=0.551 Sum_probs=66.8
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcccC
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR 137 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~ 137 (325)
...|||+||||+++++.++||+|||+|++++|||+++.+.+.++|++|++||++|+||.+|..||..+..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 75 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSA 75 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 45799999999999999999999999999999999998889999999999999999999999999987543
No 5
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.82 E-value=1.8e-20 Score=143.69 Aligned_cols=70 Identities=47% Similarity=0.732 Sum_probs=65.2
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 66 NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 66 ~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
....|||+||||+++++.++||+|||++++++|||+++ .+.+.++|+.|++||++|+||.+|..||.++.
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 74 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGS 74 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccC
Confidence 34679999999999999999999999999999999998 46788999999999999999999999999765
No 6
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.81 E-value=3.6e-20 Score=142.97 Aligned_cols=70 Identities=44% Similarity=0.575 Sum_probs=64.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHHHcCChhhHHHHHhhccc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKF 136 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~--~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~ 136 (325)
...|||+||||+++++.++||+|||++++++|||+++.. .+.+.|++|++||++|+||.+|..||.++..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 7 GMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp SSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 457999999999999999999999999999999999864 5788999999999999999999999997653
No 7
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.81 E-value=3.4e-20 Score=140.29 Aligned_cols=69 Identities=45% Similarity=0.662 Sum_probs=62.3
Q ss_pred hCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 65 ~~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
+....|||+||||+++++.++||+|||++++++|||+++.. .+.|+.|++||++|+||.+|..||+.+.
T Consensus 4 m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 4 MVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG--AEQFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp --CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC--HHHHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH--HHHHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 45678999999999999999999999999999999998754 5889999999999999999999999753
No 8
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.80 E-value=2e-20 Score=147.98 Aligned_cols=69 Identities=35% Similarity=0.563 Sum_probs=64.1
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCC-------chHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKD-------SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~-------~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++++.+|||+|||+|++++|||+++. +.+.+.|++|++||++|+||.+|..||..+.
T Consensus 14 ~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 14 LKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 45799999999999999999999999999999999873 4578999999999999999999999999875
No 9
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=7.1e-20 Score=144.50 Aligned_cols=73 Identities=47% Similarity=0.611 Sum_probs=66.2
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHHHcCChhhHHHHHhhcccCCC
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD 139 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~--~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~~ 139 (325)
...|||+||||+++++.++||+|||+|++++|||+++.. .++++|++|++||++|+||.+|..||+.+.....
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~ 81 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWR 81 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 457999999999999999999999999999999999853 6789999999999999999999999998765433
No 10
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.80 E-value=4.4e-20 Score=147.83 Aligned_cols=69 Identities=42% Similarity=0.571 Sum_probs=64.6
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++++.++||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|..||+.+.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 84 (99)
T 2yua_A 15 SRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLL 84 (99)
T ss_dssp CSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCC
T ss_pred CccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 4579999999999999999999999999999999997 56788999999999999999999999999764
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=7.4e-20 Score=149.70 Aligned_cols=70 Identities=30% Similarity=0.526 Sum_probs=65.8
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhccc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKF 136 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~ 136 (325)
...|||+||||+++|+.++||+|||+|++++||||++ ++.+.++|++|++||++|+||.+|..||+.+..
T Consensus 18 ~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 18 DTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 4589999999999999999999999999999999998 577899999999999999999999999998764
No 12
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.78 E-value=1.5e-19 Score=145.02 Aligned_cols=71 Identities=41% Similarity=0.547 Sum_probs=63.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHHHcCChhhHHHHHhhcccCCC
Q 020536 69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD 139 (325)
Q Consensus 69 ~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~--~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~~ 139 (325)
.|||+||||+++++.++||+|||++++++|||+++.. .+.+.|++|++||++|+||.+|..||..+..+..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~ 74 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLT 74 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC---
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccc
Confidence 5899999999999999999999999999999999853 4789999999999999999999999998765443
No 13
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.78 E-value=2.2e-19 Score=141.91 Aligned_cols=71 Identities=37% Similarity=0.524 Sum_probs=64.4
Q ss_pred hCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcccC
Q 020536 65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFR 137 (325)
Q Consensus 65 ~~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~ 137 (325)
+....|+|+||||+++++.++||+|||+|++++|||+++.. .++|++|++||++|+||.+|..||.++...
T Consensus 4 m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~--~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 74 (92)
T 2o37_A 4 MVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD--TEKFKEISEAFEILNDPQKREIYDQYGLEA 74 (92)
T ss_dssp CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC--HHHHHHHHHHHHHHTSHHHHHHHHHHCHHH
T ss_pred cccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh--HHHHHHHHHHHHHHCCHHHHHHHHHHCHHH
Confidence 44678999999999999999999999999999999998754 479999999999999999999999987543
No 14
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=3e-19 Score=145.45 Aligned_cols=69 Identities=39% Similarity=0.597 Sum_probs=64.4
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|+|+||||+++|+.++||+|||+|++++|||+++ .+.+.++|++|++||++|+||.+|..||.++.
T Consensus 15 ~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~ 84 (109)
T 2ctw_A 15 SGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGS 84 (109)
T ss_dssp CSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCH
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcc
Confidence 4579999999999999999999999999999999998 46788999999999999999999999998754
No 15
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.78 E-value=1.3e-19 Score=145.94 Aligned_cols=72 Identities=40% Similarity=0.650 Sum_probs=66.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcccCCC
Q 020536 68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD 139 (325)
Q Consensus 68 ~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~~ 139 (325)
..|||+||||+++++.++||+|||+|++++|||+++ .+.++++|++|++||++|+||.+|..||..+.....
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 74 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFE 74 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhc
Confidence 469999999999999999999999999999999998 467889999999999999999999999998765443
No 16
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.77 E-value=3e-19 Score=145.17 Aligned_cols=71 Identities=38% Similarity=0.559 Sum_probs=65.6
Q ss_pred hCCCCCchhhcCCCCCC-CHHHHHHHHHHHHHhhCCCCCCC----chHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 65 INGEPDHYKVLGVAQSA-TLADIKRAYRLLARKYHPDVSKD----SRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 65 ~~~~~d~Y~vLgl~~~a-s~~eIK~aYr~la~~~HPDk~~~----~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
.....|||+||||+++| +.++||+|||++++++|||+++. +.+.+.|++|++||++|+||.+|..||..+.
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 34568999999999999 99999999999999999999986 5678999999999999999999999999874
No 17
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.74 E-value=1.3e-18 Score=137.11 Aligned_cols=66 Identities=27% Similarity=0.417 Sum_probs=61.1
Q ss_pred hhCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHH
Q 020536 64 AINGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIK 129 (325)
Q Consensus 64 ~~~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~ 129 (325)
.+....|||+||||+++++.+|||+|||+|++++||||++.+.+.+.|++|++||++|+||.+|+.
T Consensus 22 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 22 RIRNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HHHTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred HHhcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 345568999999999999999999999999999999999988899999999999999999998753
No 18
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.72 E-value=5.4e-18 Score=145.87 Aligned_cols=69 Identities=35% Similarity=0.566 Sum_probs=63.3
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc-------hHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS-------RAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~-------~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++++.++||+|||+|++++||||++.+ .+.+.|+.|++||++|+||.+|+.||..+.
T Consensus 8 ~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 8 PKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 457999999999999999999999999999999998754 267899999999999999999999998764
No 19
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.72 E-value=7.6e-18 Score=149.69 Aligned_cols=70 Identities=37% Similarity=0.543 Sum_probs=65.1
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcccCC
Q 020536 69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRT 138 (325)
Q Consensus 69 ~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~ 138 (325)
.|||+||||+++|+.++||+|||++++++||||++ ++.+.++|+.|++||++|+||.+|+.||+++..+.
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~ 72 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGL 72 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTC
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccc
Confidence 58999999999999999999999999999999996 56788999999999999999999999999876543
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.68 E-value=3.6e-17 Score=143.68 Aligned_cols=69 Identities=22% Similarity=0.395 Sum_probs=62.0
Q ss_pred CCCCchhhcCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSAT--LADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as--~~eIK~aYr~la~~~HPDk~~~~~------a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
+..|||+||||+++++ .++||++||++++++||||++... +.+.|+.|++||++|+||.+|..||..+.
T Consensus 2 ~~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 78 (174)
T 3hho_A 2 NAMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSLQ 78 (174)
T ss_dssp --CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHcc
Confidence 3579999999999988 999999999999999999987543 66899999999999999999999998774
No 21
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.67 E-value=4e-18 Score=140.07 Aligned_cols=64 Identities=22% Similarity=0.294 Sum_probs=59.7
Q ss_pred CCchhhcCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 69 PDHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 69 ~d~Y~vLgl~~~as~--~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
.++|+||||+++++. ++||+|||+|++++||||+++ .++|++|++||++|+||.+|+.||.++.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~---~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD---EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT---TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc---HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 589999999999999 999999999999999999886 3789999999999999999999997653
No 22
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.65 E-value=9e-18 Score=161.11 Aligned_cols=69 Identities=48% Similarity=0.715 Sum_probs=0.0
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++|+.+|||+|||+|+++||||+++++.++++|++|++||++|+||.+|+.||+++.
T Consensus 26 ~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~ 94 (329)
T 3lz8_A 26 ELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQ 94 (329)
T ss_dssp ---------------------------------------------------------------------
T ss_pred cccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhc
Confidence 347999999999999999999999999999999999988899999999999999999999999999743
No 23
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.64 E-value=1.2e-16 Score=140.06 Aligned_cols=66 Identities=26% Similarity=0.425 Sum_probs=60.8
Q ss_pred CchhhcCCCCCC--CHHHHHHHHHHHHHhhCCCCCCCch------HHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 70 DHYKVLGVAQSA--TLADIKRAYRLLARKYHPDVSKDSR------AVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 70 d~Y~vLgl~~~a--s~~eIK~aYr~la~~~HPDk~~~~~------a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
|||+||||++++ +.++||++||+|++++||||++... +.+.|+.|++||++|+||.+|..||..+.
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 799999999999 9999999999999999999987532 45789999999999999999999999765
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.64 E-value=1.8e-17 Score=145.33 Aligned_cols=64 Identities=22% Similarity=0.343 Sum_probs=57.6
Q ss_pred CCchhhcCCCCCCC--HHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 69 PDHYKVLGVAQSAT--LADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 69 ~d~Y~vLgl~~~as--~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
.|+|+||||+++|+ .+|||+|||++++++||||++++ ++|++|++||++|+||.+|+.||+++.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~---e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE---EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC---TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH---HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 68999999999998 69999999999999999998764 789999999999999999999999875
No 25
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.63 E-value=9.9e-17 Score=144.57 Aligned_cols=69 Identities=22% Similarity=0.290 Sum_probs=61.5
Q ss_pred CCCCchhhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCc------hHHHHHHHHHHHHHHcCChhhHHHHHhhcc
Q 020536 67 GEPDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDS------RAVEVFKTIRCAYEVLSNEVTRIKYDRALK 135 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~--as~~eIK~aYr~la~~~HPDk~~~~------~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~ 135 (325)
...|||+||||+++ ++.++||++||+|++++||||++.. .+.++|+.|++||++|+||.+|+.||..+.
T Consensus 41 ~~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~l~ 117 (207)
T 3bvo_A 41 PTRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLKLH 117 (207)
T ss_dssp TTCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHT
T ss_pred CCCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhc
Confidence 46799999999986 7999999999999999999998743 256789999999999999999999997654
No 26
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.63 E-value=6.6e-17 Score=124.40 Aligned_cols=60 Identities=13% Similarity=0.344 Sum_probs=55.4
Q ss_pred CCchhhcCCCCC--CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHH
Q 020536 69 PDHYKVLGVAQS--ATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYD 131 (325)
Q Consensus 69 ~d~Y~vLgl~~~--as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD 131 (325)
.++|+||||+++ ++.++||+|||+|++++|||++++ .++|++|++||++|+|+.+|..++
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~---~~~f~~i~~AYe~L~~~~~r~~~~ 72 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS---HALMQELNSLWGTFKTEVYNLRMN 72 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC---HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC---HHHHHHHHHHHHHHhhHHHHHHHh
Confidence 589999999999 999999999999999999999865 478999999999999999998743
No 27
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.61 E-value=9.8e-17 Score=125.99 Aligned_cols=60 Identities=25% Similarity=0.267 Sum_probs=55.5
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--hHHHHHHHHHHHHHHcCChhhH
Q 020536 68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--RAVEVFKTIRCAYEVLSNEVTR 127 (325)
Q Consensus 68 ~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~--~a~~~f~~I~~Ay~iL~dp~~R 127 (325)
..++|+||||+++|+.+|||+|||+|++++|||+++.. .++++|++|++||++|+|...|
T Consensus 15 ~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 36899999999999999999999999999999999864 4789999999999999998766
No 28
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.60 E-value=1.5e-16 Score=140.41 Aligned_cols=64 Identities=23% Similarity=0.368 Sum_probs=58.9
Q ss_pred CCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch----HHHHHHHHHHHHHHcCChhhHHHH
Q 020536 67 GEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKY 130 (325)
Q Consensus 67 ~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~----a~~~f~~I~~Ay~iL~dp~~R~~Y 130 (325)
...|+|+||||+++|+.++||+|||++++++||||++... ++++|+.|++||++|+||.+|+.|
T Consensus 115 ~~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 115 AGETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TTCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred CccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 3479999999999999999999999999999999987543 789999999999999999999876
No 29
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.59 E-value=3.9e-16 Score=137.95 Aligned_cols=67 Identities=22% Similarity=0.413 Sum_probs=60.9
Q ss_pred CCCCCchhhc------CCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhHHHHHhhc
Q 020536 66 NGEPDHYKVL------GVAQ-SATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTRIKYDRAL 134 (325)
Q Consensus 66 ~~~~d~Y~vL------gl~~-~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~ 134 (325)
....|||+|| |+++ +++.++||+|||+|++++|||+++. +.+.|+.|++||++|+||.+|..||..+
T Consensus 8 ~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~--a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 8 RFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ--GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS--CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc--HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 4557999999 4665 8999999999999999999999886 5688999999999999999999999977
No 30
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.58 E-value=4.3e-16 Score=123.24 Aligned_cols=55 Identities=24% Similarity=0.352 Sum_probs=50.7
Q ss_pred CCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc----hHHHHHHHHHHHHHHcCC
Q 020536 69 PDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS----RAVEVFKTIRCAYEVLSN 123 (325)
Q Consensus 69 ~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~----~a~~~f~~I~~Ay~iL~d 123 (325)
.++|++|||+++|+.+|||+|||++++++||||+++. .++++|+.|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999999999998853 378899999999999964
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.56 E-value=5.8e-16 Score=116.64 Aligned_cols=56 Identities=18% Similarity=0.218 Sum_probs=50.9
Q ss_pred CCchhhcCCCC-CCCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCChhhH
Q 020536 69 PDHYKVLGVAQ-SATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNEVTR 127 (325)
Q Consensus 69 ~d~Y~vLgl~~-~as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp~~R 127 (325)
.++|+||||++ +++.++||+|||+|++++|||++++ .+.|++|++||++|+|+..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~---~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS---PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC---HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC---HHHHHHHHHHHHHHhhhhhc
Confidence 58999999999 7999999999999999999999754 36999999999999988655
No 32
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.56 E-value=7.2e-16 Score=125.04 Aligned_cols=60 Identities=15% Similarity=0.169 Sum_probs=53.0
Q ss_pred hCCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCc--------hHHHHHHHHHHHHHHcCChh
Q 020536 65 INGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDS--------RAVEVFKTIRCAYEVLSNEV 125 (325)
Q Consensus 65 ~~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~--------~a~~~f~~I~~Ay~iL~dp~ 125 (325)
...+.|||+|||++. |+.++||+|||++++++||||++.+ .|+++|+.|++||++|+|+.
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 345679999999996 9999999999999999999997631 36889999999999999985
No 33
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.50 E-value=2e-15 Score=158.11 Aligned_cols=74 Identities=35% Similarity=0.533 Sum_probs=40.8
Q ss_pred CCCCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCC-CchHHHHHHHHHHHHHHcCChhhHHHHHhhcccCCC
Q 020536 66 NGEPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSK-DSRAVEVFKTIRCAYEVLSNEVTRIKYDRALKFRTD 139 (325)
Q Consensus 66 ~~~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~-~~~a~~~f~~I~~Ay~iL~dp~~R~~YD~~~~~~~~ 139 (325)
..+.|||+||||+++|+.+|||+|||+|++++||||++ ++.+.++|++|++||++|+||.+|+.||+++..+..
T Consensus 18 ~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~ 92 (780)
T 3apo_A 18 RHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLE 92 (780)
T ss_dssp -----CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC------
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccc
Confidence 45689999999999999999999999999999999996 567889999999999999999999999998865543
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.98 E-value=3.3e-10 Score=107.30 Aligned_cols=65 Identities=42% Similarity=0.602 Sum_probs=56.2
Q ss_pred CCCchhhcCCCCCCCHHHHHHHHHHHHHhhCCCCCCCch----HHHHHHHHHHHHHHcCChhhHHHHHh
Q 020536 68 EPDHYKVLGVAQSATLADIKRAYRLLARKYHPDVSKDSR----AVEVFKTIRCAYEVLSNEVTRIKYDR 132 (325)
Q Consensus 68 ~~d~Y~vLgl~~~as~~eIK~aYr~la~~~HPDk~~~~~----a~~~f~~I~~Ay~iL~dp~~R~~YD~ 132 (325)
..++|++||+.+.++.++|+++|+++++++|||+.+.+. +++.|+.|.+||++|+||.+|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 458999999999999999999999999999999988644 78899999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.82 E-value=3.1e-09 Score=78.58 Aligned_cols=52 Identities=17% Similarity=0.197 Sum_probs=45.9
Q ss_pred CchhhcCCCCC---CCHHHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHHcCCh
Q 020536 70 DHYKVLGVAQS---ATLADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEVLSNE 124 (325)
Q Consensus 70 d~Y~vLgl~~~---as~~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~iL~dp 124 (325)
..|.||||+++ ++.++||++||+|...+|||+.+.+ ....+|++|.+.|...
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~---yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF---YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH---HHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHHHHH
Confidence 56899999999 9999999999999999999997654 5677899999998643
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=87.74 E-value=0.33 Score=49.61 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=40.0
Q ss_pred hhCCCCCchhhcCCCCCCCH--HHHHHHHHHHHHhhCCCCCCCchHHHHHHHHHHHHHH
Q 020536 64 AINGEPDHYKVLGVAQSATL--ADIKRAYRLLARKYHPDVSKDSRAVEVFKTIRCAYEV 120 (325)
Q Consensus 64 ~~~~~~d~Y~vLgl~~~as~--~eIK~aYr~la~~~HPDk~~~~~a~~~f~~I~~Ay~i 120 (325)
......|+|.+||++.+... .+|+++||++++..+++ .+++..+..|+.|
T Consensus 624 ~~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~-------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 624 LKDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ-------RHRYTLVDMANKV 675 (681)
T ss_dssp HTSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH-------HHHHHHHHHHHHH
T ss_pred HHccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh-------HHHHHHHHHhccc
Confidence 44566779999999776655 77999999999976665 4788899988876
Done!