Your job contains 1 sequence.
>020539
MRMNPPADAAETSPLLAHSLPDHLIRSRRLLRRPPPPLRGAAARLLRRASGRRLMLREPS
VRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIV
GYALQCLFHVFCVSLEFKRRRRGEGVVFGDSVSGSSSTTVTGDEEERFHGENDSSVAKNL
ESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGI
AVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGEIQEPFGGIMIECD
TDMPMEHVISEDDAVSLSLCCVLCF
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 020539
(325 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2098916 - symbol:AT3G61180 species:3702 "Arabi... 788 2.3e-78 1
TAIR|locus:2139717 - symbol:AT4G11680 species:3702 "Arabi... 754 9.3e-75 1
TAIR|locus:2195077 - symbol:AT1G12760 species:3702 "Arabi... 470 8.6e-73 2
TAIR|locus:2015248 - symbol:AT1G63170 species:3702 "Arabi... 717 7.7e-71 1
TAIR|locus:2200301 - symbol:AT1G68070 species:3702 "Arabi... 572 1.8e-55 1
TAIR|locus:1005452975 - symbol:RIE1 "RING-finger protein ... 515 2.0e-49 1
TAIR|locus:2125652 - symbol:AT4G32600 species:3702 "Arabi... 188 8.1e-17 2
TAIR|locus:2034210 - symbol:AT1G80400 species:3702 "Arabi... 163 1.0e-12 2
TAIR|locus:2161740 - symbol:AT5G55970 species:3702 "Arabi... 154 8.5e-09 1
TAIR|locus:2133877 - symbol:AT4G26580 species:3702 "Arabi... 153 1.0e-08 1
TAIR|locus:2037164 - symbol:AT1G44010 "AT1G44010" species... 96 9.3e-05 2
>TAIR|locus:2098916 [details] [associations]
symbol:AT3G61180 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
eggNOG:NOG302028 HOGENOM:HOG000240958 ProtClustDB:CLSN2682050
EMBL:AY059830 EMBL:AY064638 IPI:IPI00525767 RefSeq:NP_567110.1
UniGene:At.21194 ProteinModelPortal:Q93YQ5 SMR:Q93YQ5
EnsemblPlants:AT3G61180.1 GeneID:825290 KEGG:ath:AT3G61180
TAIR:At3g61180 InParanoid:Q93YQ5 OMA:RMMLREP PhylomeDB:Q93YQ5
Genevestigator:Q93YQ5 Uniprot:Q93YQ5
Length = 379
Score = 788 (282.4 bits), Expect = 2.3e-78, P = 2.3e-78
Identities = 157/271 (57%), Positives = 187/271 (69%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPSVRVRE AAEQLEERQS WAYS+PIIVLD+LWN +FVIV+ A+LG S +E P+VPLRL
Sbjct: 58 EPSVRVREVAAEQLEERQSQWAYSKPIIVLDILWNFLFVIVSIAILGFSSDEDPDVPLRL 117
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRXXX---XXXXXXXXXXXXXXXXXXXXXRFHGEND- 173
I+GY +QCLFHV CV E+KRRR + +D
Sbjct: 118 WIIGYNVQCLFHVGCVIAEYKRRRVANSPPPSGEDSSNHESLSGSEDESDGYSINNTDDD 177
Query: 174 ---SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMI 230
+S K+LESANT SF+WWI+GFYW+TA E L SPQLYWLCV FLAFDV+FV+I
Sbjct: 178 DHGTSFTKHLESANTMFSFVWWIIGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVI 237
Query: 231 CVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGEIQE 290
CV VA LIGIAVCCCLPCI+ ILYAL ++EGA +EEI+RL KFKF + EKVNGEI+E
Sbjct: 238 CVAVASLIGIAVCCCLPCIIAILYALADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRE 297
Query: 291 PFGGIMIECDTDMPMEHVI-SEDDAVSLSLC 320
GGIM DT+ E ++ SED S+ LC
Sbjct: 298 TQGGIMTGLDTESQTERMLLSEDAECSICLC 328
>TAIR|locus:2139717 [details] [associations]
symbol:AT4G11680 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005774 "vacuolar membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 GO:GO:0005774
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AL161532 HSSP:Q9LRB7 EMBL:AL049500 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059121 EMBL:AY057713 EMBL:BT010750
IPI:IPI00525329 PIR:T04215 RefSeq:NP_567379.1 UniGene:At.20734
ProteinModelPortal:Q93Z92 SMR:Q93Z92 EnsemblPlants:AT4G11680.1
GeneID:826773 KEGG:ath:AT4G11680 GeneFarm:3078 TAIR:At4g11680
eggNOG:NOG288486 InParanoid:Q93Z92 OMA:HLEERQT PhylomeDB:Q93Z92
Genevestigator:Q93Z92 Uniprot:Q93Z92
Length = 390
Score = 754 (270.5 bits), Expect = 9.3e-75, P = 9.3e-75
Identities = 138/269 (51%), Positives = 189/269 (70%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRETAAEQLEERQS WAYS+P++ LD+LWNL FV + AVL +S +EKP +PLR+
Sbjct: 83 EPSMLVRETAAEQLEERQSDWAYSKPVVFLDILWNLAFVAIGVAVLILSRDEKPNMPLRV 142
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRRXXXXXXXXXXXXXXXXXXXXXXXXRFHGENDSS-V 176
+VGY +QC H+ CV +E++RRRR + ++S
Sbjct: 143 WVVGYGIQCWLHMACVCVEYRRRRRRRHPEDGGGSGLTNSSSQQYVSLAQLEDRGETSNP 202
Query: 177 AKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC 236
AK+LESANT SF+WWI+GFYW++A G+TL S SPQLYWLC+ FL FDV FV+ CV +AC
Sbjct: 203 AKHLESANTMFSFIWWIIGFYWVSAGGQTLSSDSPQLYWLCIIFLGFDVFFVVFCVALAC 262
Query: 237 LIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGEIQEPFGGIM 296
+IG+AVCCCLPCI+ ILYA+ ++EGA++ +ID++PKF+F++ +EK++G+ + GIM
Sbjct: 263 VIGLAVCCCLPCIIAILYAVADQEGASKNDIDQMPKFRFTKTGNVEKLSGKAR----GIM 318
Query: 297 IECDTDMPMEHVISEDDAVSLSLCCV-LC 324
EC TD P+E +S +DA CC+ LC
Sbjct: 319 TECGTDSPIERSLSPEDAE----CCICLC 343
>TAIR|locus:2195077 [details] [associations]
symbol:AT1G12760 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 GO:GO:0004842
EMBL:AC025417 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:DQ059089 EMBL:AY136370 EMBL:BT000279
IPI:IPI00516637 RefSeq:NP_172736.2 UniGene:At.43884
ProteinModelPortal:Q9LN71 SMR:Q9LN71 PaxDb:Q9LN71 PRIDE:Q9LN71
EnsemblPlants:AT1G12760.1 GeneID:837832 KEGG:ath:AT1G12760
TAIR:At1g12760 InParanoid:Q9LN71 OMA:ESPRIYW PhylomeDB:Q9LN71
Genevestigator:Q9LN71 Uniprot:Q9LN71
Length = 408
Score = 470 (170.5 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 82/150 (54%), Positives = 112/150 (74%)
Query: 174 SSVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVG 233
SSVAK+LESANT SF+WWI+GFYW++A G+ L SP++YWL + FL FDV FV+ CV
Sbjct: 210 SSVAKHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVA 269
Query: 234 VACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRI-DGLEKVNGEIQEPF 292
+AC+IGIAVCCCLPCI+ +LYA+ ++EGA++E+I++L KFKF ++ D + N E Q
Sbjct: 270 LACVIGIAVCCCLPCIIAVLYAVADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTT 329
Query: 293 GGIMIECDTDMPMEHVISEDDAVSLSLCCV 322
GIM EC TD P+EH + ++DA CC+
Sbjct: 330 EGIMTECGTDSPIEHTLLQEDAE----CCI 355
Score = 284 (105.0 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
Identities = 52/85 (61%), Positives = 69/85 (81%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AAEQLEERQS WAYS+P++VLD++WNL FV VA A+L +S E P +PLR+
Sbjct: 74 EPSMLVREAAAEQLEERQSDWAYSKPVVVLDIVWNLAFVSVATAILVMSRKEHPIMPLRV 133
Query: 118 RIVGYALQCLFHVFCVSLEFKRRRR 142
++GYALQC+ H+ CV +E++RR R
Sbjct: 134 WLLGYALQCVLHMVCVCVEYRRRNR 158
>TAIR|locus:2015248 [details] [associations]
symbol:AT1G63170 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872 GO:GO:0016874
GO:GO:0008270 GO:GO:0016567 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC010795 eggNOG:NOG277561 HOGENOM:HOG000240958
ProtClustDB:CLSN2682050 EMBL:AY058092 EMBL:AY086095 IPI:IPI00547063
PIR:C96657 RefSeq:NP_564810.1 UniGene:At.26656
ProteinModelPortal:Q8LDB8 SMR:Q8LDB8 EnsemblPlants:AT1G63170.1
GeneID:842621 KEGG:ath:AT1G63170 TAIR:At1g63170 InParanoid:Q8LDB8
OMA:ANTMISF PhylomeDB:Q8LDB8 Genevestigator:Q8LDB8 Uniprot:Q8LDB8
Length = 381
Score = 717 (257.5 bits), Expect = 7.7e-71, P = 7.7e-71
Identities = 141/284 (49%), Positives = 189/284 (66%)
Query: 58 EPSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRL 117
EPS+ VRE AAEQLEERQS WAYS+P++VLD +WNL FV+VA AVL +S +E P +PLR+
Sbjct: 48 EPSMLVREAAAEQLEERQSDWAYSKPVVVLDFVWNLAFVVVATAVLVLSSDENPNMPLRV 107
Query: 118 RIVGYALQCLFHVFCVSLEFKRR--RRXXXXXXXXXXXXXXXXXX---------XXXXXX 166
I+GY LQC+ H+ CV +E++RR RR
Sbjct: 108 WIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDEEEGLGLSRNSDE 167
Query: 167 RFH--G--ENDS-SVAKNLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFL 221
R+ G EN++ S AK+LESANT +SF+WW++GFYW+++ G+ L SPQLYWLC+ FL
Sbjct: 168 RYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQGSPQLYWLCIVFL 227
Query: 222 AFDVVFVMICVGVACLIGIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGL 281
FDV FV+ CV +AC+IGIAVCCCLPCI+ +LYA+ E+EGA++E+ID+L KFKF ++
Sbjct: 228 GFDVFFVVFCVALACVIGIAVCCCLPCIIAVLYAVAEQEGASKEDIDQLTKFKFRKVGDT 287
Query: 282 EK--VNGEI-QEPFGGIMIECDTDMPMEHVISEDDAVSLSLCCV 322
K V+ E Q GG+M EC TD P+EH + +DA CC+
Sbjct: 288 MKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAE----CCI 327
>TAIR|locus:2200301 [details] [associations]
symbol:AT1G68070 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0006661 "phosphatidylinositol
biosynthetic process" evidence=RCA] InterPro:IPR001841 Pfam:PF13639
PROSITE:PS50089 SMART:SM00184 EMBL:CP002684 GO:GO:0005774
GO:GO:0046872 GO:GO:0008270 EMBL:AC012563 Gene3D:3.30.40.10
InterPro:IPR013083 HSSP:Q9LRB7 ProtClustDB:CLSN2682050
EMBL:BT024880 IPI:IPI00540766 PIR:H96703 RefSeq:NP_176974.1
UniGene:At.35572 ProteinModelPortal:Q9C9X1 SMR:Q9C9X1 PRIDE:Q9C9X1
EnsemblPlants:AT1G68070.1 GeneID:843135 KEGG:ath:AT1G68070
TAIR:At1g68070 InParanoid:Q9C9X1 OMA:MLWNTAF PhylomeDB:Q9C9X1
Genevestigator:Q9C9X1 Uniprot:Q9C9X1
Length = 343
Score = 572 (206.4 bits), Expect = 1.8e-55, P = 1.8e-55
Identities = 117/266 (43%), Positives = 159/266 (59%)
Query: 60 SVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRI 119
S+ VRETAA++LEER++ W YS+P++ LD+LWN FV+VA +L V EKP VP+R+ I
Sbjct: 44 SMVVRETAAQELEERRADWGYSKPVVALDMLWNTAFVLVAIVMLLVFKEEKPNVPIRIWI 103
Query: 120 VGYALQCLFHVFCVSLEFKRRRRXXXXXXXXXXXXXXXXXXXXXXXXRFHGENDSSVAKN 179
GYA+QCL HV V LEF++R RF K
Sbjct: 104 CGYAIQCLVHVVLVWLEFRKRNARSRPGDLEAAQATNQDSEDEDNDERFLS------TKT 157
Query: 180 LESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIG 239
ES NT +SF+WWIVGFYW+ + G+ L+ + LYWL FLAFDV F + CV +ACLIG
Sbjct: 158 CESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYWLTFVFLAFDVFFAIFCVVLACLIG 217
Query: 240 IAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEKVNGEIQEPFGGIMIEC 299
IA+CCCLPCI+ +LYA+ +EGA+E ++ LPK++F ++ N E Q GG MI
Sbjct: 218 IALCCCLPCIIALLYAVAGQEGASEADLSILPKYRFHTMN-----NDEKQSDGGGKMIPV 272
Query: 300 DT---DMPMEHVISEDDAVSLSLCCV 322
D ++ E V+ +DA CC+
Sbjct: 273 DAASENLGNERVLLPEDAD----CCI 294
>TAIR|locus:1005452975 [details] [associations]
symbol:RIE1 "RING-finger protein for embryogenesis"
species:3702 "Arabidopsis thaliana" [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0009790 "embryo development" evidence=IMP]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 Prosite:PS00518 GO:GO:0016021 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0016874 GO:GO:0008270
GO:GO:0016567 GO:GO:0009790 Gene3D:3.30.40.10 InterPro:IPR013083
HSSP:Q9LRB7 EMBL:AC006069 UniGene:At.47033 UniGene:At.66449
EMBL:AY168924 IPI:IPI00539076 RefSeq:NP_849924.1
ProteinModelPortal:Q8GUU2 SMR:Q8GUU2 EnsemblPlants:AT2G01735.1
GeneID:814703 KEGG:ath:AT2G01735 GeneFarm:3082 TAIR:At2g01735
eggNOG:NOG277561 HOGENOM:HOG000240958 InParanoid:Q8GUU2
PhylomeDB:Q8GUU2 ProtClustDB:CLSN2682050 Genevestigator:Q8GUU2
Uniprot:Q8GUU2
Length = 359
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 100/252 (39%), Positives = 138/252 (54%)
Query: 59 PSVRVRETAAEQLEERQSYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLR 118
PS+ VRETAA LEER+ W YS+P++ D+LWN V+ + +L ++ E+P P+R+
Sbjct: 52 PSMLVRETAARALEERRIDWGYSKPVVAADILWNAALVLASAVMLVGTVEERPNEPIRVW 111
Query: 119 IVGYALQCLFHVFCVSLEFKRRRRXXXXXXXXXXXXXXXXXXXXXXXXRFHGENDSSVAK 178
I Y LQCLFHV V E+ RR S K
Sbjct: 112 ICVYGLQCLFHVVLVWSEYWRRNSTRRARDLESYDHEDYNIEYDYEQDSDDNSTTYSFVK 171
Query: 179 NLESANTFLSFLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLI 238
ES NT +SF+WWI+GFYW+ G+ L+ +P LYWL V FLA DV F + CV +ACL+
Sbjct: 172 RCESINTVISFIWWIIGFYWVVEGGDKLLGEAPNLYWLSVIFLAIDVFFAVFCVVLACLV 231
Query: 239 GIAVCCCLPCILGILYALTEREGATEEEIDRLPKFKFSRIDGLEK-VNGE---IQEPFGG 294
GIA+CCCLPCI+ +LYA+ EG +E E+ LP +KF EK + G + P G
Sbjct: 232 GIALCCCLPCIIALLYAVAGTEGVSEAELGVLPLYKFKAFHSNEKNITGPGKMVPIPING 291
Query: 295 IMIECDTDMPME 306
+ + + + E
Sbjct: 292 LCLATERTLLAE 303
>TAIR|locus:2125652 [details] [associations]
symbol:AT4G32600 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089 SMART:SM00184
GO:GO:0005886 EMBL:CP002687 GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7 EMBL:AY074271
EMBL:AY081300 EMBL:AY096655 IPI:IPI00534397 RefSeq:NP_194986.2
UniGene:At.27844 ProteinModelPortal:Q8VY23 SMR:Q8VY23
EnsemblPlants:AT4G32600.1 GeneID:829395 KEGG:ath:AT4G32600
HOGENOM:HOG000239557 InParanoid:Q8VY23 OMA:EHIIDIP PhylomeDB:Q8VY23
ProtClustDB:CLSN2691130 Genevestigator:Q8VY23 Uniprot:Q8VY23
Length = 453
Score = 188 (71.2 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 55/142 (38%), Positives = 75/142 (52%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + + +P LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 241 VWFVVGNVWIFG-GHSSAAEAPNLYRLCLVFLTFS------CIGYAMPFILCTTICCCLP 293
Query: 248 CILGIL-YA--LTEREGATEEEIDRLPKFKF----SRIDGLEKVNGEIQEPFGGIMIECD 300
CI+ IL Y LT+ GAT E I+ LP KF SR +G + NG GG+ +
Sbjct: 294 CIISILGYREDLTQPRGATPESINALPTHKFKLKKSRSNGDD--NGSSTSE-GGV-VAAG 349
Query: 301 TDMPMEHVISEDDAVSLSLCCV 322
TD E IS +DAV CC+
Sbjct: 350 TDN--ERAISGEDAV----CCI 365
Score = 69 (29.3 bits), Expect = 8.1e-17, Sum P(2) = 8.1e-17
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 96 VIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
+I A VL +S +E P PL IVGYA C+
Sbjct: 124 IIAAIVVLSLSKHEHPRAPLFTWIVGYACGCV 155
>TAIR|locus:2034210 [details] [associations]
symbol:AT1G80400 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA;ISS] InterPro:IPR001841 Pfam:PF13639 PROSITE:PS50089
SMART:SM00184 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0046872
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
EMBL:AC018848 eggNOG:NOG273848 HOGENOM:HOG000239557
ProtClustDB:CLSN2691130 EMBL:AY062845 EMBL:BT000070 EMBL:AK317002
IPI:IPI00535746 PIR:G96835 RefSeq:NP_178156.1 UniGene:At.19651
UniGene:At.48403 ProteinModelPortal:Q9C965 SMR:Q9C965
EnsemblPlants:AT1G80400.1 GeneID:844380 KEGG:ath:AT1G80400
TAIR:At1g80400 InParanoid:Q9C965 OMA:ELPCTHF PhylomeDB:Q9C965
ArrayExpress:Q9C965 Genevestigator:Q9C965 Uniprot:Q9C965
Length = 407
Score = 163 (62.4 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 49/140 (35%), Positives = 73/140 (52%)
Query: 190 LWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVAC--LIGIAVCCCLP 247
+W++VG WI G + S SP+LY LC+ FL F C+G A ++ +CCCLP
Sbjct: 236 VWFVVGNVWIFG-GHSSPSDSPKLYRLCIAFLTFS------CIGYAMPFILCATICCCLP 288
Query: 248 CILGIL---YALTEREGATEEEIDRLPKFKF---SRIDGLE-KVNGEIQEPFGGIMIECD 300
C++ +L ++ GAT E I+ LP ++F SR D LE GE GG ++
Sbjct: 289 CLISVLGFRENFSQTRGATAEAINALPVYRFKSKSRND-LEFSEEGE-----GGFLL--- 339
Query: 301 TDMPMEHVISEDDAVSLSLC 320
+ +IS +DA S +C
Sbjct: 340 LGSQKKRLISGEDA-SCCIC 358
Score = 64 (27.6 bits), Expect = 1.0e-12, Sum P(2) = 1.0e-12
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
I ++++ + ++ A V+ ++ +E PE PL ++GY CL
Sbjct: 106 ISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 148
>TAIR|locus:2161740 [details] [associations]
symbol:AT5G55970 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 HSSP:Q9LRB7
ProtClustDB:CLSN2690028 EMBL:AY085253 IPI:IPI00546676
RefSeq:NP_568834.1 RefSeq:NP_851197.1 UniGene:At.7462
ProteinModelPortal:Q8LES9 SMR:Q8LES9 PRIDE:Q8LES9
EnsemblPlants:AT5G55970.1 EnsemblPlants:AT5G55970.2 GeneID:835695
KEGG:ath:AT5G55970 TAIR:At5g55970 eggNOG:NOG241449
HOGENOM:HOG000238199 InParanoid:Q8LES9 OMA:CCICLAQ PhylomeDB:Q8LES9
Genevestigator:Q8LES9 Uniprot:Q8LES9
Length = 343
Score = 154 (59.3 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 58/209 (27%), Positives = 93/209 (44%)
Query: 76 SYWAYSRPIIVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSL 135
S W S I +L L ++ F L +S E+P P+RL I GY + CL ++ L
Sbjct: 89 STWMMSELIALLVQL-----TVITFT-LAISKEERPIWPVRLWITGYDVGCLLNLM---L 139
Query: 136 EFKRRRRXXXXXXXXXXXXXXXXXXXXXXXXRFHGENDSSVAKNLESANTFLSF-LWWIV 194
+ R R+ R E SS N + L F +W+++
Sbjct: 140 LYGRYRQLDINQGNGFVLGDVEQQQ------RGREETRSSHLMNKCRTSLELFFAIWFVI 193
Query: 195 GFYWITASGETLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL- 253
G W+ S +P+L+ LCV+ LA++ IC L+ + +CC +P I +L
Sbjct: 194 GNVWVFDSRFGSFHHAPKLHVLCVSLLAWNA----ICYSFPFLLFLFLCCLVPLISSLLG 249
Query: 254 YAL---TEREGATEEEIDRLPKFKFSRID 279
Y + + A++++I LP +KF RID
Sbjct: 250 YNMNMGSSDRAASDDQISSLPSWKFKRID 278
>TAIR|locus:2133877 [details] [associations]
symbol:AT4G26580 species:3702 "Arabidopsis thaliana"
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] InterPro:IPR001841
Pfam:PF13639 PROSITE:PS50089 SMART:SM00184 EMBL:CP002687
GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AK227805 IPI:IPI00524845 RefSeq:NP_001190848.1
RefSeq:NP_194388.2 UniGene:At.23121 UniGene:At.67112
ProteinModelPortal:Q0WSW1 SMR:Q0WSW1 EnsemblPlants:AT4G26580.1
EnsemblPlants:AT4G26580.2 GeneID:828765 KEGG:ath:AT4G26580
eggNOG:NOG314995 OMA:RPVWPMR ProtClustDB:CLSN2690028
Genevestigator:Q0WSW1 Uniprot:Q0WSW1
Length = 335
Score = 153 (58.9 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 47/199 (23%), Positives = 91/199 (45%)
Query: 85 IVLDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCLFHVFCVSLEFKRRRRXX 144
+V +++ L+ + V + L +S NE+P P+RL I GY + CL ++ + + R++
Sbjct: 88 MVSELIALLLQITVITSTLALSKNERPVWPMRLWITGYNVGCLLNLMLLYGRY-RQQDTS 146
Query: 145 XXXXXXXXXXXXXXXXXXXXXXRFHGENDSSVAKNLESANTFLSFLWWIVGFYWITASGE 204
H N K S F + +W+++G W+ S
Sbjct: 147 HENAFSFGDIEQQQRSREETTRCSHLMN-----KCRTSLELFFA-IWFVIGNVWVFDSRF 200
Query: 205 TLISCSPQLYWLCVTFLAFDVVFVMICVGVACLIGIAVCCCLPCILGIL-YAL---TERE 260
+P L+ LC++ LA++ +C L+ + +CC +P + L Y + + +
Sbjct: 201 GSFHYAPILHVLCISLLAWNA----LCYSFPFLLFLLLCCVVPLVSSFLGYNMNVGSSEK 256
Query: 261 GATEEEIDRLPKFKFSRID 279
GA++++I LP +K+ ID
Sbjct: 257 GASDDQISSLPSWKYKLID 275
>TAIR|locus:2037164 [details] [associations]
symbol:AT1G44010 "AT1G44010" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC022314
HOGENOM:HOG000137617 EMBL:AY954760 IPI:IPI00530137
RefSeq:NP_175067.1 UniGene:At.52025 EnsemblPlants:AT1G44010.1
GeneID:841001 KEGG:ath:AT1G44010 TAIR:At1g44010 eggNOG:NOG283770
OMA:MAFLAFT PhylomeDB:Q9LNZ6 ProtClustDB:CLSN2914316
Genevestigator:Q9LNZ6 Uniprot:Q9LNZ6
Length = 227
Score = 96 (38.9 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 189 FLWWIVGFYWITASGETLISCSPQLYWLCVTFLAFDVV-FV---MICVGVACLIGIAVCC 244
F+ W+V F W+ S + + + Q +WLC+ FLAF + +V +IC + C I + +
Sbjct: 131 FVGWVVLFLWMYHSSSSSLYDNTQYFWLCMAFLAFTCIRYVPARLICSAI-CFIFVVIIW 189
Query: 245 CLPCILG 251
+LG
Sbjct: 190 FCADVLG 196
Score = 57 (25.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 87 LDVLWNLVFVIVAFAVLGVSINEKPEVPLRLRIVGYALQCL 127
++ + N+V ++ AF V+ + +E P + I+GY C+
Sbjct: 60 IEFVLNIVQIVAAFVVVTRAKDEHPGTSFLVWIIGYTCGCV 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.328 0.141 0.455 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 325 269 0.00096 114 3 11 22 0.39 33
32 0.39 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 602 (64 KB)
Total size of DFA: 211 KB (2116 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 20.15u 0.21s 20.36t Elapsed: 00:00:01
Total cpu time: 20.15u 0.21s 20.36t Elapsed: 00:00:01
Start: Tue May 21 05:00:48 2013 End: Tue May 21 05:00:49 2013