Query 020543
Match_columns 325
No_of_seqs 60 out of 62
Neff 3.1
Searched_HMMs 13730
Date Mon Mar 25 04:35:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/020543.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/020543hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1d5va_ a.4.5.14 (A:) Adipocyt 17.3 28 0.002 25.8 1.9 18 262-279 20-37 (94)
2 d2nqwa1 d.145.1.4 (A:4-90) Hyp 9.3 57 0.0042 22.6 1.4 26 254-279 2-29 (87)
3 d2cyua1 a.9.1.1 (A:2-40) E3-bi 9.0 63 0.0046 20.3 1.4 22 254-275 15-36 (39)
4 d2o3ga1 d.145.1.4 (A:180-255) 7.4 58 0.0042 22.2 0.7 17 263-279 5-21 (76)
5 d1w85i_ a.9.1.1 (I:) E3/E1 bin 7.4 83 0.0061 20.1 1.5 21 256-276 20-40 (42)
6 d2rk5a1 d.145.1.4 (A:5-88) Put 6.8 72 0.0053 21.8 1.0 17 263-279 10-26 (84)
7 d2p13a1 d.145.1.4 (A:431-515) 6.7 74 0.0054 22.0 1.0 17 263-279 15-31 (85)
8 d1uqra_ c.23.13.1 (A:) Type II 6.1 85 0.0062 24.7 1.2 16 263-278 22-37 (146)
9 d2c6ya1 a.4.5.14 (A:1-98) Inte 6.1 96 0.007 22.7 1.4 19 261-279 18-36 (98)
10 d1gqoa_ c.23.13.1 (A:) Type II 6.0 89 0.0065 24.4 1.2 16 263-278 21-36 (141)
No 1
>d1d5va_ a.4.5.14 (A:) Adipocyte-transcription factor FREAC-11 (s12, fkh-14) {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.29 E-value=28 Score=25.77 Aligned_cols=18 Identities=33% Similarity=0.290 Sum_probs=14.9
Q ss_pred CccCCcchHhhhhhhcCC
Q 020543 262 GIHGDVTLNDINQRIHSP 279 (325)
Q Consensus 262 g~~Gd~TL~DIN~ril~~ 279 (325)
.-+|.+||+||.+.|...
T Consensus 20 sp~~~ltL~eIY~~i~~~ 37 (94)
T d1d5va_ 20 APEKKITLNGIYQFIMDR 37 (94)
T ss_dssp CSSSSBCHHHHHHHHHHH
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 457889999999999754
No 2
>d2nqwa1 d.145.1.4 (A:4-90) Hypothetical protein PG0272 {Porphyromonas gingivalis [TaxId: 837]}
Probab=9.26 E-value=57 Score=22.65 Aligned_cols=26 Identities=23% Similarity=0.514 Sum_probs=19.8
Q ss_pred eeeeeccC--CccCCcchHhhhhhhcCC
Q 020543 254 PFAFIKPC--GIHGDVTLNDINQRIHSP 279 (325)
Q Consensus 254 PF~lvKP~--g~~Gd~TL~DIN~ril~~ 279 (325)
||..+-.+ -++|.++|.|+|+.+-..
T Consensus 2 p~~ki~d~~~~v~G~~~l~dl~~~l~~~ 29 (87)
T d2nqwa1 2 PFKVLGDGSYLFEGKTSLSDVRHYLDLP 29 (87)
T ss_dssp CEEECTTSCEEEETTCBHHHHHHHHTCC
T ss_pred CeEEECCCEEEEEEeCCHHHHHHHhCCC
Confidence 55555555 468999999999998654
No 3
>d2cyua1 a.9.1.1 (A:2-40) E3-binding domain of dihydrolipoamide succinyltransferase {Escherichia coli [TaxId: 562]}
Probab=8.95 E-value=63 Score=20.31 Aligned_cols=22 Identities=27% Similarity=0.445 Sum_probs=18.1
Q ss_pred eeeeeccCCccCCcchHhhhhh
Q 020543 254 PFAFIKPCGIHGDVTLNDINQR 275 (325)
Q Consensus 254 PF~lvKP~g~~Gd~TL~DIN~r 275 (325)
-.+.|++.|.+|-||-.||=+-
T Consensus 15 dl~~i~GtG~~GRI~k~Dv~~~ 36 (39)
T d2cyua1 15 DASAIKGTGVGGRLTREDVEKH 36 (39)
T ss_dssp CGGGSCCCSSSSCCCHHHHHHH
T ss_pred CHHHCcCCCCCCcEeHHHHHHH
Confidence 3457899999999999998543
No 4
>d2o3ga1 d.145.1.4 (A:180-255) Putative protein NMB1485 {Neisseria meningitidis [TaxId: 487]}
Probab=7.39 E-value=58 Score=22.24 Aligned_cols=17 Identities=12% Similarity=0.497 Sum_probs=14.9
Q ss_pred ccCCcchHhhhhhhcCC
Q 020543 263 IHGDVTLNDINQRIHSP 279 (325)
Q Consensus 263 ~~Gd~TL~DIN~ril~~ 279 (325)
++|.++|.|+|+.+-.+
T Consensus 5 vdG~~~i~dl~~~l~~~ 21 (76)
T d2o3ga1 5 VEGALEYVELAPQLNLP 21 (76)
T ss_dssp EETTCBHHHHTTTTTCC
T ss_pred EEcCCCHHHHHHHHCcC
Confidence 68999999999998765
No 5
>d1w85i_ a.9.1.1 (I:) E3/E1 binding domain of dihydrolipoyl acetyltransferase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=7.36 E-value=83 Score=20.10 Aligned_cols=21 Identities=24% Similarity=0.431 Sum_probs=17.7
Q ss_pred eeeccCCccCCcchHhhhhhh
Q 020543 256 AFIKPCGIHGDVTLNDINQRI 276 (325)
Q Consensus 256 ~lvKP~g~~Gd~TL~DIN~ri 276 (325)
+.|++.|.+|-||-.||-.-|
T Consensus 20 ~~i~GTG~~GRItk~DV~~~i 40 (42)
T d1w85i_ 20 RLVQGTGKNGRVLKEDIDAFL 40 (42)
T ss_dssp TTSCCCSGGGCCCHHHHHHHH
T ss_pred HHCccCCCCCcEeHHHHHHHh
Confidence 468999999999999996544
No 6
>d2rk5a1 d.145.1.4 (A:5-88) Putative hemolysin SMU1693 {Streptococcus mutans [TaxId: 1309]}
Probab=6.76 E-value=72 Score=21.79 Aligned_cols=17 Identities=35% Similarity=0.614 Sum_probs=14.9
Q ss_pred ccCCcchHhhhhhhcCC
Q 020543 263 IHGDVTLNDINQRIHSP 279 (325)
Q Consensus 263 ~~Gd~TL~DIN~ril~~ 279 (325)
++|.++|.|+|+.+-..
T Consensus 10 v~G~~~l~dl~~~l~~~ 26 (84)
T d2rk5a1 10 VLGTMTLNDFNEYFETD 26 (84)
T ss_dssp EETTSBHHHHHHHHTCC
T ss_pred EEeeeEHHHHHHHhCCC
Confidence 57999999999999765
No 7
>d2p13a1 d.145.1.4 (A:431-515) Uncharacterized protein NE2227 {Nitrosomonas europaea [TaxId: 915]}
Probab=6.66 E-value=74 Score=21.98 Aligned_cols=17 Identities=6% Similarity=0.265 Sum_probs=14.7
Q ss_pred ccCCcchHhhhhhhcCC
Q 020543 263 IHGDVTLNDINQRIHSP 279 (325)
Q Consensus 263 ~~Gd~TL~DIN~ril~~ 279 (325)
++|.++|.|+|+.+-..
T Consensus 15 v~G~~~l~dl~~~l~~~ 31 (85)
T d2p13a1 15 MDGWISIRKASNLLEHD 31 (85)
T ss_dssp EETTSBHHHHHHHHTSC
T ss_pred EEecCCHHHHHHHHCCC
Confidence 68999999999998654
No 8
>d1uqra_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Actinobacillus pleuropneumoniae [TaxId: 715]}
Probab=6.14 E-value=85 Score=24.71 Aligned_cols=16 Identities=44% Similarity=0.665 Sum_probs=13.5
Q ss_pred ccCCcchHhhhhhhcC
Q 020543 263 IHGDVTLNDINQRIHS 278 (325)
Q Consensus 263 ~~Gd~TL~DIN~ril~ 278 (325)
.-|.+||.|||+++..
T Consensus 22 iYG~~TL~~i~~~~~~ 37 (146)
T d1uqra_ 22 IYGSQTLSDIEQHLQQ 37 (146)
T ss_dssp GTTCCCHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHH
Confidence 5688999999999854
No 9
>d2c6ya1 a.4.5.14 (A:1-98) Interleukin enhancer binding factor {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.14 E-value=96 Score=22.74 Aligned_cols=19 Identities=26% Similarity=0.274 Sum_probs=15.4
Q ss_pred CCccCCcchHhhhhhhcCC
Q 020543 261 CGIHGDVTLNDINQRIHSP 279 (325)
Q Consensus 261 ~g~~Gd~TL~DIN~ril~~ 279 (325)
...+|.+||+||.+.|...
T Consensus 18 ~sp~~~ltL~eIy~~i~~~ 36 (98)
T d2c6ya1 18 MAPDKQLTLNGIYTHITKN 36 (98)
T ss_dssp TSTTSCEEHHHHHHHHHHH
T ss_pred hCCCCCccHHHHHHHHHHh
Confidence 3467889999999999755
No 10
>d1gqoa_ c.23.13.1 (A:) Type II 3-dehydroquinate dehydratase {Bacillus subtilis [TaxId: 1423]}
Probab=5.97 E-value=89 Score=24.37 Aligned_cols=16 Identities=31% Similarity=0.563 Sum_probs=12.8
Q ss_pred ccCCcchHhhhhhhcC
Q 020543 263 IHGDVTLNDINQRIHS 278 (325)
Q Consensus 263 ~~Gd~TL~DIN~ril~ 278 (325)
.-|.+||.|||+++..
T Consensus 21 iYG~~TL~~i~~~~~~ 36 (141)
T d1gqoa_ 21 VFGRQTLTDIETDLFQ 36 (141)
T ss_dssp HHCSCCHHHHHHHHHH
T ss_pred cCCccCHHHHHHHHHH
Confidence 3478999999998854
Done!